# terms

id: PBO:0083543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ribosomal protein gene RPL21A/YBR191W","termid":"PBO:0083543"}


id: PBO:0075816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scavenger receptor cysteine rich family member with 5 domains","termid":"PBO:0075816"}


id: MONDO:1011551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Legg-Calvé-Perthes disease that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Legg-Calvé-Perthes disease, non-human animal","termid":"MONDO:1011453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calvé-Perthes disease, goat","secondary_identifiers":["OMIA:000586-9925"],"termid":"MONDO:1011551","xrefs":{"Monarch":{"xref_id":"1011551"}}}


id: GO:0046916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A homeostatic process involved in the maintenance of a steady state level of transition metal ions within a cell. A transition metal is an element whose atom has an incomplete d-subshell of extranuclear electrons, or which gives rise to a cation or cations with an incomplete d-subshell. Transition metals often have more than one valency state. Biologically relevant transition metals include vanadium, manganese, iron, copper, cobalt, nickel, molybdenum and silver.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intracellular transition metal ion homeostasis (obsolete GO:0046916)","synonyms":[{"name":"cellular transition metal ion homeostasis","type":"exact"}],"termid":"GO:0046916"}


id: PBO:0077259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 9","termid":"PBO:0077259"}


id: PBO:0090360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UbiE family methyltransferase","termid":"PBO:0090360"}


id: SO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000402 enhancer_attribute (obsolete SO:0000402)","termid":"SO:0000402"}


id: PBO:0063152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pro-apoptotic WT1 regulator","termid":"PBO:0063152"}


id: GO:0004169
data:
  {"annotated_genes":["SJAG_01491","SJAG_04316","SJAG_04053"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71813,76894,79154],"is_not":false,"summary":null,"term":"GO:0004169"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dolichyl phosphate D-mannose + protein = dolichyl phosphate + O-D-mannosylprotein.","definition_xrefs":["EC:2.4.1.109","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mannosyltransferase activity","termid":"GO:0000030"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"dolichyl-phosphate-mannose-protein mannosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5615637","Reactome:R-HSA-5615604","MetaCyc:2.4.1.109-RXN","Reactome:R-HSA-5615556"],"synonyms":[{"name":"O-glycoside mannosyltransferase","type":"broad"},{"name":"dolichol phosphomannose-protein mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate-D-mannose:protein O-D-mannosyltransferase activity","type":"related"},{"name":"dolichyl-phosphate-mannose-protein O-mannosyltransferase activity","type":"exact"},{"name":"protein O-D-mannosyltransferase activity","type":"related"},{"name":"protein O-mannosyltransferase activity","type":"exact"}],"termid":"GO:0004169","terms_by_termid":{"GO:0004169":null}}


id: GO:0048337
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesoderm cell fate specification.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate specification","termid":"GO:0042660"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell fate specification","termid":"GO:0042661"},{"relation_name":"is_a","term_name":"positive regulation of mesodermal cell differentiation","termid":"GO:1905772"},{"relation_name":"positively_regulates","term_name":"mesodermal cell fate specification","termid":"GO:0007501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesodermal cell fate specification","synonyms":[{"name":"activation of mesodermal cell fate specification","type":"narrow"},{"name":"stimulation of mesodermal cell fate specification","type":"narrow"},{"name":"up regulation of mesodermal cell fate specification","type":"exact"},{"name":"up-regulation of mesodermal cell fate specification","type":"exact"},{"name":"upregulation of mesodermal cell fate specification","type":"exact"}],"termid":"GO:0048337"}


id: GO:1905446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial ATP synthesis coupled electron transport.","definition_xrefs":["GO_REF:0000058","GOC:bc","PMID:23707074","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of generation of precursor metabolites and energy","termid":"GO:0043467"},{"relation_name":"regulates","term_name":"mitochondrial ATP synthesis coupled electron transport","termid":"GO:0042775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of mitochondrial ATP synthesis coupled electron transport","synonyms":[{"name":"regulation of mitochondrial electron transport","type":"broad"},{"name":"regulation of organelle ATP synthesis coupled electron transport","type":"broad"}],"termid":"GO:1905446"}


id: PBO:0001337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitinated histone-like protein Uhp1","termid":"PBO:0001337"}


id: PBO:0038581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and BTB domain containing 1","termid":"PBO:0038581"}


id: MONDO:0957337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated chorioretinal dystrophy","secondary_identifiers":["Orphanet:519300","UMLS:C5681368","GARD:22096","MEDGEN:1842795"],"termid":"MONDO:0957337","xrefs":{"Monarch":{"xref_id":"0957337"}}}


id: PBO:0058418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4787","termid":"PBO:0058418"}


id: PBO:0002747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fusion cytochrome c oxidase assembly protein Cox1102, mitochondrial ribosomal protein Rsm2202 (predicted)","termid":"PBO:0002747"}


id: MONDO:0018948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary neuromuscular disorder characterized by multiple cores on muscle biopsy and clinical features of a congenital myopathy.","definition_xrefs":["Orphanet:598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of selenoprotein N1","termid":"MONDO:0016197"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiminicore myopathy","secondary_identifiers":["SCTID:55133004","DOID:0080991","GARD:16536","NANDO:1200480","MEDGEN:75731","NANDO:2200871","UMLS:C0270962"],"synonyms":[{"name":"MmD","type":"exact"},{"name":"multicore disease","type":"exact"},{"name":"multicore myopathy","type":"exact"},{"name":"multiminicore disease","type":"exact"}],"termid":"MONDO:0018948","xrefs":{"Monarch":{"xref_id":"0018948"}}}


id: PBO:0056672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 30","termid":"PBO:0056672"}


id: FYPO:0002059
data:
  {"alleles_by_uniquename":{"SJAG_02409:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02409","name":"stc1delta","uniquename":"SJAG_02409:allele-1"},"SJAG_02594:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02594","name":"arb1delta","uniquename":"SJAG_02594:allele-1"},"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03356:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03356","name":"rdp1delta","uniquename":"SJAG_03356:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_03916:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03916","name":"chp1delta","uniquename":"SJAG_03916:allele-1"},"SJAG_04061:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04061","name":"arb2delta","uniquename":"SJAG_04061:allele-1"},"SJAG_04574:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04574","name":"clr4delta","uniquename":"SJAG_04574:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121518],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002061"}],"single_locus_phenotype":[{"annotations":[121502,121503,121517,121507,121505,121506,121501,121504],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002061"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which none of the cells in the population are viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":9,"genes_by_uniquename":{"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_03118":null,"SJAG_03356":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04061":null,"SJAG_04574":null},"genotype_count":9,"genotypes_by_uniquename":{"ago1delta":{"display_name":"ago1delta","display_uniquename":"ago1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]}]},"arb1delta":{"display_name":"arb1delta","display_uniquename":"arb1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02594:allele-1","expression":"Null"}]}]},"arb2delta":{"display_name":"arb2delta","display_uniquename":"arb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04061:allele-1","expression":"Null"}]}]},"chp1delta":{"display_name":"chp1delta","display_uniquename":"chp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03916:allele-1","expression":"Null"}]}]},"clr4delta":{"display_name":"clr4delta","display_uniquename":"clr4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]}]},"clr4delta__leo1delta":{"display_name":"clr4delta leo1delta","display_uniquename":"clr4delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04574:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"rdp1delta":{"display_name":"rdp1delta","display_uniquename":"rdp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03356:allele-1","expression":"Null"}]}]},"stc1delta":{"display_name":"stc1delta","display_uniquename":"stc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02409:allele-1","expression":"Null"}]}]}},"in_subsets":["fypo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_04574","SJAG_03118"],"name":"inviable cell population","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_04061","SJAG_02594","SJAG_04574","SJAG_03689","SJAG_02409","SJAG_02621","SJAG_03356","SJAG_03916"],"single_locus_genotype_uniquenames":["clr4delta","rdp1delta","ago1delta","stc1delta","chp1delta","arb2delta","dcr1delta","arb1delta"],"synonyms":[{"name":"essential","type":"related"},{"name":"lethal in cell population","type":"exact"}],"termid":"FYPO:0002059","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0002061":null}}


id: GO:0097616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the type IV pilus-dependent motility of a symbiont organism (i.e. the controlled movement of a bacterial cell which is dependent on the presence of type IV pili, and which includes social gliding motility and twitching motility). The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12037568","GOC:als"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont type IV pilus-dependent motility (obsolete GO:0097616)","synonyms":[{"name":"positive regulation by host of bacterial type IV pilus-dependent motility","type":"exact"}],"termid":"GO:0097616"}


id: MONDO:0030979
data:
  {"annotated_genes":["SJAG_03758"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87533],"is_not":false,"summary":null,"term":"MONDO:0030979"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"EN1-related dorsoventral syndrome","termid":"MONDO:1040032"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03758":null},"genotype_count":0,"is_obsolete":false,"name":"ENDOVE syndrome, limb-brain type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18561","MEDGEN:1782954","OMIM:619218","UMLS:C5543142"],"synonyms":[{"name":"ENDOVESLB","type":"exact"},{"name":"Mesomelia of Lower Extremities With Hand, Foot, and Brain Anomalies","type":"exact"}],"termid":"MONDO:0030979","terms_by_termid":{"MONDO:0030979":null},"xrefs":{"Monarch":{"xref_id":"0030979"}}}


id: GO:0052346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052346)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052346"}


id: PBO:0038470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 9","termid":"PBO:0038470"}


id: MOD:01525
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ4plex 117 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter fragment","termid":"MOD:01521"},{"relation_name":"is_a","term_name":"mTRAQ reporter fragment","termid":"MOD:01870"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01525"}


id: GO:0032918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of spermidine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermidine metabolic process","termid":"GO:0008216"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermidine acetylation","termid":"GO:0032918"}


id: PBO:0040206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrotactin 2","termid":"PBO:0040206"}


id: PBO:0075438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N3","termid":"PBO:0075438"}


id: MONDO:0013435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CCDC40 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 15","secondary_identifiers":["GARD:15714","OMIM:613808","NCIT:C155999","DOID:0110623","UMLS:C3151137","MEDGEN:462487"],"synonyms":[{"name":"CCDC40 primary ciliary dyskinesia","type":"exact"},{"name":"CILD15","type":"exact"},{"name":"ciliary dyskinesia, primary, 15","type":"related"},{"name":"ciliary dyskinesia, primary, 15, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 15","type":"exact"},{"name":"primary ciliary dyskinesia 15","type":"exact"},{"name":"primary ciliary dyskinesia 15 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in CCDC40","type":"exact"},{"name":"primary ciliary dyskinesia type 15","type":"exact"}],"termid":"MONDO:0013435","xrefs":{"Monarch":{"xref_id":"0013435"}}}


id: MONDO:0003468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A synovial sarcoma characterized by the presence of both an epithelial and a spindle cell component.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synovial sarcoma","termid":"MONDO:0010434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"biphasic synovial sarcoma","secondary_identifiers":["NCIT:C4279","UMLS:C0334507","ICDO:9043/3","DOID:5492","MEDGEN:137773"],"synonyms":[{"name":"biphasic sarcoma of synovium","type":"exact"},{"name":"biphasic sarcoma of the synovium","type":"exact"},{"name":"synovial sarcoma, biphasic","type":"exact"},{"name":"synovial sarcoma, biphasic (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003468","xrefs":{"Monarch":{"xref_id":"0003468"}}}


id: PBO:0089245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S37","termid":"PBO:0089245"}


id: PBO:0036072
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0036072"}


id: GO:0003367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of one ameboid cell to another that contributes to the establishment of cell polarity that is part of the directed movement of one of the cells.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion via plasma-membrane adhesion molecules","termid":"GO:0098742"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in ameboidal cell migration","termid":"GO:0003365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155","GO:0007163"],"is_obsolete":false,"name":"cell-cell adhesion involved in ameboidal cell migration","termid":"GO:0003367"}


id: PBO:0031433
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cortical_patch_organization","termid":"PBO:0031433"}


id: PBO:0083484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene UIP4/YPL186C","termid":"PBO:0083484"}


id: PBO:0068122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 429","termid":"PBO:0068122"}


id: PBO:0067444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 566, pseudogene","termid":"PBO:0067444"}


id: PBO:0075075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 125","termid":"PBO:0075075"}


id: GO:0021670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the lateral ventricles over time, from the formation to the mature structure. The two lateral ventricles are a cavity in each of the cerebral hemispheres derived from the cavity of the embryonic neural tube. They are separated from each other by the septum pellucidum, and each communicates with the third ventricle by the foramen of Monro, through which also the choroid plexuses of the lateral ventricles become continuous with that of the third ventricle.","definition_xrefs":["GOC:dgh","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"},{"relation_name":"part_of","term_name":"ventricular system development","termid":"GO:0021591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lateral ventricle development","termid":"GO:0021670"}


id: GO:0072307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"regulates","term_name":"metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric nephron tubule epithelial cell differentiation","termid":"GO:0072307"}


id: GO:0061542
data:
  {"annotated_genes":["SJAG_04642"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66501],"is_not":false,"summary":null,"term":"GO:0061542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-demethylubiquinol + S-adenosyl-L-methionine = a ubiquinol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["PMID:10777520","PMID:23190198","RHEA:44380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"3-demethylubiquinol 3-O-methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:2.1.1.64","Reactome:R-HSA-2162186"],"synonyms":[{"name":"2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone methyltransferase","type":"narrow"},{"name":"3-demethylubiquinol-n 3-O-methyltransferase activity","type":"exact"},{"name":"5-demethylubiquinone-10 methyltransferase","type":"narrow"},{"name":"5-demethylubiquinone-9 methyltransferase","type":"narrow"},{"name":"OMHMB-methyltransferase","type":"related"},{"name":"S-adenosyl-L-methionine:2-octaprenyl-3-methyl-5-hydroxy-6-methoxy-1,4-benzoquinone-O-methyltransferase","type":"related"}],"termid":"GO:0061542","terms_by_termid":{"GO:0061542":null}}


id: PBO:0084340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kynureninase; required for the de novo biosynthesis of NAD from tryptophan via kynurenine; expression regulated by Hst1p","termid":"PBO:0084340"}


id: PBO:0078154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 32 (pseudogene)","termid":"PBO:0078154"}


id: PBO:0051900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 8","termid":"PBO:0051900"}


id: PBO:0086809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YHR022C is not an essential gene","termid":"PBO:0086809"}


id: PBO:0071693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 25","termid":"PBO:0071693"}


id: FYPO:0005126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more carbohydrate metabolism RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells) during the meiotic cell cycle. Carbohydrate metabolism RNAs are transcribed from genes whose products are involved in carbohydrate metabolic processes.","definition_xrefs":["PomBase:mah","PMID:17927811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during meiotic cell cycle","termid":"FYPO:0005120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased level of carbohydrate metabolism gene mRNA during meiotic cell cycle","synonyms":[{"name":"increased carbohydrate metabolism gene mRNA accumulation during meiotic cell cycle","type":"related"},{"name":"increased level of carbohydrate metabolic process mRNA during meiotic cell cycle","type":"exact"},{"name":"increased level of carbohydrate metabolism gene RNA during meiotic cell cycle","type":"exact"},{"name":"increased level of carbohydrate metabolism gene transcripts during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0005126"}


id: PBO:0076158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 pseudogene 2","termid":"PBO:0076158"}


id: PBO:0042509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 3","termid":"PBO:0042509"}


id: PBO:0073573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHISA5 pseudogene 1","termid":"PBO:0073573"}


id: GO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that positively regulates sulfite transport.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sulfite transport by transcription from RNA polymerase II promoter (obsolete GO:0100006)","termid":"GO:0100006"}


id: GO:0019391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucuronosides, compound composed of a hydroxy compound linked to a glucuronate residue.","definition_xrefs":["PMID:28389557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside catabolic process","termid":"GO:0016139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucuronoside catabolic process","secondary_identifiers":["MetaCyc:GLUCUROCAT-PWY"],"synonyms":[{"name":"glucuronide catabolic process","type":"exact"},{"name":"glucuronide catabolism","type":"exact"},{"name":"glucuronoside breakdown","type":"exact"},{"name":"glucuronoside catabolism","type":"exact"},{"name":"glucuronoside degradation","type":"exact"}],"termid":"GO:0019391"}


id: GO:0018038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-cysteine amide by hydrolysis and oxidation of an interior Cys-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0085"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-cysteine amidation (obsolete GO:0018038)","termid":"GO:0018038"}


id: GO:0061383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of shaping a trabecula in an organ. A trabecula is a small, often microscopic, tissue element in the form of a small beam, strut or rod, which generally has a mechanical function. Trabecula are usually but not necessarily, composed of dense collagenous tissue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trabecula morphogenesis","termid":"GO:0061383"}


id: PBO:0043887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone","termid":"PBO:0043887"}


id: PR:O74831
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A frataxin, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR16821:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frataxin homolog, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1183.03c","secondary_identifiers":["UniProtKB:O74831"],"synonyms":[{"name":"Spom972h-FXN","type":"exact"}],"termid":"PR:O74831"}


id: MONDO:0968977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 9, autosomal recessive","secondary_identifiers":["MEDGEN:1854926","OMIM:620786","UMLS:C5935607"],"termid":"MONDO:0968977","xrefs":{"Monarch":{"xref_id":"0968977"}}}


id: MONDO:0004987
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88269],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0001187"}]},"cv_name":"mondo","definition":"A benign or malignant, primary or metastatic neoplasm of the bladder. - 2003","definition_xrefs":["NCIT:C2901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"},{"relation_name":"is_a","term_name":"urinary system neoplasm","termid":"MONDO:0021066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"is_obsolete":false,"name":"urinary bladder neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:239.4","UMLS:C0005695","EFO:0000294","MEDGEN:594","SCTID:126885006"],"synonyms":[{"name":"bladder neoplasm","type":"exact"},{"name":"bladder tumor","type":"exact"},{"name":"bladder tumors","type":"exact"},{"name":"bladder tumour","type":"exact"},{"name":"bladder tumours","type":"exact"},{"name":"neoplasm of bladder","type":"exact"},{"name":"neoplasm of the bladder","type":"exact"},{"name":"neoplasm of the urinary bladder","type":"exact"},{"name":"neoplasm of urinary bladder","type":"exact"},{"name":"tumor of bladder","type":"exact"},{"name":"tumor of the bladder","type":"exact"},{"name":"tumor of the urinary bladder","type":"exact"},{"name":"tumor of urinary bladder","type":"exact"},{"name":"tumour of bladder","type":"exact"},{"name":"tumour of the bladder","type":"exact"},{"name":"tumour of the urinary bladder","type":"exact"},{"name":"tumour of urinary bladder","type":"exact"},{"name":"urinary bladder neoplasm","type":"exact"},{"name":"urinary bladder neoplasm (disease)","type":"exact"},{"name":"urinary bladder neoplasms","type":"exact"},{"name":"urinary bladder tumor","type":"exact"},{"name":"urinary bladder tumors","type":"exact"},{"name":"urinary bladder tumour","type":"exact"},{"name":"urinary bladder tumours","type":"exact"}],"termid":"MONDO:0004987","terms_by_termid":{"MONDO:0001187":null},"xrefs":{"Monarch":{"xref_id":"0004987"}}}


id: PATO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001067 absolute strain (obsolete PATO:0001067)","termid":"PATO:0001067"}


id: GO:0018029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The palmitoylation of peptidyl-lysine to form peptidyl-N6-palmitoyl-L-lysine.","definition_xrefs":["RESID:AA0077"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine palmitoylation (obsolete GO:0018029)","termid":"GO:0018029"}


id: PBO:0027856
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuolar_morphology_during_vegetative_growth","termid":"PBO:0027856"}


id: GO:0043916
data:
  {"annotated_genes":["SJAG_01971"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103602],"is_not":false,"summary":null,"term":"GO:0043916"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA containing 7-methylguanine + H2O = DNA with abasic site + 7-methylguanine. This reaction is the hydrolysis of DNA by cleavage of the N-C1' glycosidic bond between the damaged DNA 7-methylguanine and the deoxyribose sugar to remove the 7-methylguanine, leaving an abasic site.","definition_xrefs":["PMID:16468998","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylbase DNA N-glycosylase activity","termid":"GO:0003905"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01971":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016787","GO:0140097","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DNA-7-methylguanine glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043916","terms_by_termid":{"GO:0043916":null}}


id: PBO:0051238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-46-1 (pseudogene)","termid":"PBO:0051238"}


id: PBO:0078998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon AGT) 5-1","termid":"PBO:0078998"}


id: GO:0048001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-erythrose 4-phosphate + H2O + NAD+ = 4-phospho-D-erythronate + 2 H+ + NADH.","definition_xrefs":["EC:1.2.1.72","RHEA:12056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"erythrose-4-phosphate dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01825","MetaCyc:ERYTH4PDEHYDROG-RXN","GO:0033724"],"synonyms":[{"name":"D-erythrose 4-phosphate:NAD+ oxidoreductase activity","type":"related"},{"name":"E4P dehydrogenase activity","type":"related"},{"name":"E4PDH","type":"related"},{"name":"Epd dehydrogenase activity","type":"related"},{"name":"GapB","type":"related"},{"name":"erythrose 4-phosphate dehydrogenase activity","type":"related"}],"termid":"GO:0048001"}


id: PBO:0044657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dCTP pyrophosphatase 1","termid":"PBO:0044657"}


id: PATO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001006 absolute latency (obsolete PATO:0001006)","termid":"PATO:0001006"}


id: PBO:0055884
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit B","termid":"PBO:0055884"}


id: PBO:0089790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TACC protein Alp7","termid":"PBO:0089790"}


id: MONDO:0020441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Right superior vena cava connecting to the left-sided atrium is a rare, congenital vascular malformation of the major vessels characterized by the right SVC passing medially and dorsally to the aortic root and draining into the left atrium. Patients usually present a right-to-left systemic venous blood shunt which may manifest with arterial hypoxemia, cyanosis, exercise dyspnea, clubbing of the fingers, palpitations, murmurs and/or potentially fatal brain abscess. Association with other cardiac anomalies has been reported.","definition_xrefs":["Orphanet:99110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of superior vena cava","termid":"MONDO:0019829"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right superior vena cava connecting to left-sided atrium","secondary_identifiers":["GARD:19653","MEDGEN:576401","UMLS:C0344658"],"synonyms":[{"name":"right SVC connecting to left-sided atrium","type":"exact"},{"name":"right superior caval vein connecting to left-sided atrium","type":"exact"}],"termid":"MONDO:0020441","xrefs":{"Monarch":{"xref_id":"0020441"}}}


id: PBO:0042795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEP192 divergent transcript","termid":"PBO:0042795"}


id: GO:1901220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac chamber morphogenesis.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of cardiac chamber morphogenesis","termid":"GO:1901219"},{"relation_name":"negatively_regulates","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac chamber morphogenesis","synonyms":[{"name":"down regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down regulation of heart chamber morphogenesis","type":"exact"},{"name":"down-regulation of cardiac chamber morphogenesis","type":"exact"},{"name":"down-regulation of heart chamber morphogenesis","type":"exact"},{"name":"downregulation of cardiac chamber morphogenesis","type":"exact"},{"name":"downregulation of heart chamber morphogenesis","type":"exact"},{"name":"inhibition of cardiac chamber morphogenesis","type":"narrow"},{"name":"inhibition of heart chamber morphogenesis","type":"narrow"},{"name":"negative regulation of heart chamber morphogenesis","type":"exact"}],"termid":"GO:1901220"}


id: PBO:0001076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (predicted)","termid":"PBO:0001076"}


id: GO:0050188
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphoenolpyruvate = 3-phosphonopyruvate.","definition_xrefs":["EC:5.4.2.9","RHEA:17013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate mutase activity","secondary_identifiers":["KEGG_REACTION:R00661","MetaCyc:PHOSPHOENOLPYRUVATE-MUTASE-RXN"],"synonyms":[{"name":"PEP mutase activity","type":"related"},{"name":"PEP phosphomutase activity","type":"related"},{"name":"PEPPM","type":"related"},{"name":"phosphoenolpyruvate 2,3-phosphonomutase activity","type":"related"},{"name":"phosphoenolpyruvate phosphomutase activity","type":"related"},{"name":"phosphoenolpyruvate-phosphonopyruvate phosphomutase activity","type":"related"}],"termid":"GO:0050188"}


id: MONDO:0009727
data:
  {"annotated_genes":["SJAG_01941","SJAG_02463"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88726,88727],"is_not":false,"summary":null,"term":"MONDO:0009727"}]},"cv_name":"mondo","definition":"A lethal perinatal bone dysplasia characterized by limb shortening, normal sized skull with cleft palate, hitchhiker thumbs, distinctive facial dysmorphism and radiographic skeletal features, caused by mutations in the diastrophic dysplasia sulfate transporter gene.","definition_xrefs":["Orphanet:56304"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"atelosteogenesis","termid":"MONDO:0000389"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"SLC26A2-related skeletal dysplasia","termid":"MONDO:0100592"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01941":null,"SJAG_02463":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"atelosteogenesis type II","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1850554","SCTID:254055004","ICD10CM:Q77.5","OMIM:256050","GARD:8329","ICD9:756.9","MEDGEN:338072","MESH:C535395"],"synonyms":[{"name":"AO2","type":"exact"},{"name":"AOII","type":"exact"},{"name":"De 50A Chapelle dysplasia","type":"related"},{"name":"De la Chapelle dysplasia","type":"related"},{"name":"atelosteogenesis II","type":"related"},{"name":"atelosteogenesis type 2","type":"exact"},{"name":"atelosteogenesis type II","type":"exact"},{"name":"atelosteogenesis, type 2","type":"related"},{"name":"atelosteogenesis, type II","type":"related"},{"name":"neonatal osseous dysplasia 1","type":"related"},{"name":"neonatal osseous dysplasia type 1","type":"exact"}],"termid":"MONDO:0009727","terms_by_termid":{"MONDO:0009727":null},"xrefs":{"Monarch":{"xref_id":"0009727"}}}


id: PBO:0114064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, predicted KOW-SH3 superfamily member","termid":"PBO:0114064"}


id: PBO:0062737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily E member 4","termid":"PBO:0062737"}


id: GO:0098551
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the late endosome membrane that faces the lumen.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of endosome membrane","termid":"GO:0098565"},{"relation_name":"part_of","term_name":"late endosome membrane","termid":"GO:0031902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005768","GO:0005737"],"is_obsolete":false,"name":"lumenal side of late endosome membrane","synonyms":[{"name":"internal leaflet of late endosome membrane","type":"exact"},{"name":"internal side of late endosome membrane","type":"exact"}],"termid":"GO:0098551"}


id: PBO:0074383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG6 nonsense mediated mRNA decay factor","termid":"PBO:0074383"}


id: PBO:0040255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATG10 antisense RNA 1","termid":"PBO:0040255"}


id: PBO:0072067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S11 pseudogene 5","termid":"PBO:0072067"}


id: MONDO:0043257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus foliaceus","termid":"MONDO:0019324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"pemphigus and fogo selvagem","secondary_identifiers":["GARD:7353","MEDGEN:120470","SCTID:46459009","UMLS:C0263314","HGNC:3048","MESH:C535551","Orphanet:636955"],"synonyms":[{"name":"Brazilian pemphigus","type":"related"},{"name":"Brazilian pemphigus foliaceus","type":"exact"},{"name":"FS","type":"related"},{"name":"South American pemphigus","type":"related"},{"name":"amendola's syndrome","type":"related"},{"name":"endemic pemphigus foliaceus","type":"related"},{"name":"fogo selvagem","type":"related"},{"name":"wild fire","type":"related"},{"name":"wildfire pemphigus","type":"related"}],"termid":"MONDO:0043257","xrefs":{"Monarch":{"xref_id":"0043257"}}}


id: PBO:0047161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member A","termid":"PBO:0047161"}


id: PBO:0089247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 involved in vesicle docking Pep5/Vps11-like","termid":"PBO:0089247"}


id: PBO:0077827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP53 target 3 family member F","termid":"PBO:0077827"}


id: GO:1902603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of carnitine across a membrane.","definition_xrefs":["GOC:pr","GO_REF:0000069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine transport","termid":"GO:0015879"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"carnitine transmembrane transport","termid":"GO:1902603"}


id: PBO:0109838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NuA4 histone acetyltransferase core complex-Piccolo HAT module linker protein Epl1","termid":"PBO:0109838"}


id: PBO:0053993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1312","termid":"PBO:0053993"}


id: MONDO:0005335
data:
  {"annotated_genes":["SJAG_03453","SJAG_01837","SJAG_02226","SJAG_04206","SJAG_00980","SJAG_04394","SJAG_02231","SJAG_02426","SJAG_04699","SJAG_01620","SJAG_01082","SJAG_02748","SJAG_02187"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88461,88466,88459,88463,88464,88460,88465,89341,88462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005575"},{"annotations":[88351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[87168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87631,87630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the colon or rectum. Representative examples of benign neoplasms include lipoma and leiomyoma. Representative examples of malignant neoplasms include carcinoma, lymphoma, and sarcoma. Colorectal adenomas always exhibit epithelial dysplasia and are considered premalignant neoplasms.","definition_xrefs":["NCIT:C2956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal neoplasm","termid":"MONDO:0021118"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01082":null,"SJAG_01620":null,"SJAG_01837":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02426":null,"SJAG_02748":null,"SJAG_03453":null,"SJAG_04206":null,"SJAG_04394":null,"SJAG_04699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D015179","MONDO:0021236","UMLS:C0009404","MEDGEN:3171","EFO:0004142"],"synonyms":[{"name":"colorectal neoplasm","type":"exact"},{"name":"colorectal tumor","type":"exact"},{"name":"colorectal tumour","type":"exact"},{"name":"colorectum neoplasm","type":"exact"},{"name":"colorectum neoplasm (disease)","type":"exact"},{"name":"colorectum tumor","type":"exact"},{"name":"colorectum tumour","type":"exact"},{"name":"large bowel neoplasm","type":"exact"},{"name":"large bowel tumor","type":"exact"},{"name":"large bowel tumour","type":"exact"},{"name":"large intestinal neoplasm","type":"exact"},{"name":"large intestine neoplasm","type":"exact"},{"name":"large intestine tumor","type":"exact"},{"name":"large intestine tumour","type":"exact"},{"name":"neoplasm of colorectum","type":"exact"},{"name":"neoplasm of large bowel","type":"exact"},{"name":"neoplasm of the large bowel","type":"exact"},{"name":"tumor of colorectum","type":"exact"},{"name":"tumor of large bowel","type":"exact"},{"name":"tumor of the large bowel","type":"exact"},{"name":"tumour of colorectum","type":"exact"},{"name":"tumour of large bowel","type":"exact"},{"name":"tumour of the large bowel","type":"exact"}],"termid":"MONDO:0005335","terms_by_termid":{"MONDO:0005575":null,"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0005335"}}}


id: PBO:0049111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 173","termid":"PBO:0049111"}


id: SO:0001589
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which causes a disruption of the translational reading frame, because the number of nucleotides inserted or deleted is not a multiple of three.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_altering_variant","termid":"SO:0001818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frameshift_variant","secondary_identifiers":["loinc:LA6694-9","http://vat.gersteinlab.org/formats.php","http://snp.gs.washington.edu/SeattleSeqAnnotation137/HelpHowToUse.jsp","http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:frameshift block substitution","type":"related"},{"name":"ANNOVAR:frameshift substitution","type":"related"},{"name":"Jannovar:frameshift_variant","type":"exact"},{"name":"Seattleseq:frameshift","type":"exact"},{"name":"Seattleseq:frameshift-near-splice","type":"related"},{"name":"VAAST:frameshift_variant","type":"exact"},{"name":"VAT:deletionFS","type":"narrow"},{"name":"VAT:insertionFS","type":"narrow"},{"name":"VEP:frameshift_variant","type":"exact"},{"name":"frameshift variant","type":"exact"},{"name":"frameshift_","type":"exact"},{"name":"frameshift_coding","type":"exact"},{"name":"snpEff:FRAME_SHIFT","type":"exact"}],"termid":"SO:0001589"}


id: MONDO:1012973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Skeletal dysplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973","xrefs":{"Monarch":{"xref_id":"1012973"}}}


id: PBO:0068712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear","termid":"PBO:0068712"}


id: PBO:0012279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase","termid":"PBO:0012279"}


id: GO:0072698
data:
  {"annotated_genes":["SJAG_05266","SJAG_03437","SJAG_02695","SJAG_01371","SJAG_05220","SJAG_00918","SJAG_03915","SJAG_04901","SJAG_01546","SJAG_02529","SJAG_01211","SJAG_02731","SJAG_01224","SJAG_05319","SJAG_02045","SJAG_01775"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904518"},{"annotations":[98882,115990,93306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902441"},{"annotations":[72670],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035372"},{"annotations":[109541,116156,91151,118979,102544,92989,91758,98785,100638,110927,111939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"A cellular protein localization process in which a protein is transported to, or maintained at, a location within the microtubule cytoskeleton.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02045":null,"SJAG_02529":null,"SJAG_02695":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_03915":null,"SJAG_04901":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to microtubule cytoskeleton","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein localisation to microtubule cytoskeleton","type":"exact"}],"termid":"GO:0072698","terms_by_termid":{"GO:0035372":null,"GO:1902441":null,"GO:1904518":null,"GO:1990976":null}}


id: GO:0051548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of keratinocyte migration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell migration","termid":"GO:0010633"},{"relation_name":"is_a","term_name":"regulation of keratinocyte migration","termid":"GO:0051547"},{"relation_name":"negatively_regulates","term_name":"keratinocyte migration","termid":"GO:0051546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of keratinocyte migration","synonyms":[{"name":"down regulation of keratinocyte migration","type":"exact"},{"name":"down-regulation of keratinocyte migration","type":"exact"},{"name":"downregulation of keratinocyte migration","type":"exact"},{"name":"inhibition of keratinocyte migration","type":"narrow"}],"termid":"GO:0051548"}


id: PBO:0039640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde oxidase 3, pseudogene","termid":"PBO:0039640"}


id: FYPO:0003835
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which horsetail movement is normal (i.e. indistinguishable from wild type). Horsetail movement is the oscillatory movement of the nucleus that takes place during meiotic prophase I.","definition_xrefs":["PomBase:mah","GO:0030989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"},{"relation_name":"is_a","term_name":"normal nucleus positioning","termid":"FYPO:0001389"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal horsetail movement","synonyms":[{"name":"normal dynein-driven meiotic oscillatory nuclear movement","type":"exact"},{"name":"normal horsetail nuclear movement","type":"exact"}],"termid":"FYPO:0003835"}


id: PBO:0040998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bolA family member 3 pseudogene 3","termid":"PBO:0040998"}


id: GO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamate + H+ + NADPH + O2 = 2-coumarate + H2O + NADP+.","definition_xrefs":["RHEA:10956","EC:1.14.13.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-cinnamate 2-monooxygenase activity","secondary_identifiers":["MetaCyc:TRANS-CINNAMATE-2-MONOOXYGENASE-RXN","KEGG_REACTION:R02254"],"synonyms":[{"name":"cinnamate 2-hydroxylase activity","type":"related"},{"name":"cinnamate 2-monooxygenase activity","type":"related"},{"name":"cinnamic 2-hydroxylase activity","type":"related"},{"name":"cinnamic acid 2-hydroxylase activity","type":"related"},{"name":"trans-cinnamate,NADPH:oxygen oxidoreductase (2-hydroxylating)","type":"related"},{"name":"trans-cinnamic acid 2-hydroxylase activity","type":"exact"}],"termid":"GO:0050344"}


id: MONDO:0957811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Alport syndrome","termid":"MONDO:0018965"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Alport syndrome 3b, autosomal recessive","secondary_identifiers":["MEDGEN:1848447","OMIM:620536","UMLS:C5882699"],"termid":"MONDO:0957811","xrefs":{"Monarch":{"xref_id":"0957811"}}}


id: GO:0052812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4,5-trisphosphate + ADP + 2 H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phosphatidylinositol-3,4-bisphosphate 5-kinase activity (obsolete GO:0052812)","synonyms":[{"name":"phosphatidylinositol-3,4-bisphosphate 5-kinase activity","type":"exact"}],"termid":"GO:0052812"}


id: PBO:0067816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 118","termid":"PBO:0067816"}


id: PBO:0044583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysbindin domain containing 1","termid":"PBO:0044583"}


id: PBO:0085936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP fusion protein localizes to the endoplasmic reticulum","termid":"PBO:0085936"}


id: PBO:0085968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; potential Cdc28p substrate; overproduction confers resistance to methylmercury","termid":"PBO:0085968"}


id: GO:0033108
data:
  {"annotated_genes":["SJAG_00703","SJAG_04560","SJAG_01405","SJAG_01141","SJAG_07005","SJAG_01140","SJAG_01996","SJAG_01895","SJAG_03337","SJAG_04348","SJAG_06468","SJAG_03296","SJAG_04116","SJAG_03322","SJAG_03574","SJAG_02975","SJAG_05199","SJAG_06392","SJAG_05302","SJAG_00852","SJAG_04450","SJAG_00449","SJAG_02229","SJAG_07008","SJAG_04553","SJAG_03099","SJAG_02979","SJAG_06135","SJAG_06046","SJAG_01838","SJAG_04603","SJAG_05398","SJAG_03046","SJAG_04899","SJAG_02480","SJAG_01503","SJAG_05305"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120432,73917,59516,94495,96668,108895,91036,72328,93668,91233,103716,109204,61501,96683,109522,119120,106033,62856,74535,80487,105776,78674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033617"},{"annotations":[91053,76046,111772,75459,112191,80155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033615"},{"annotations":[96684,104577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097250"},{"annotations":[72695,68812,101262,109526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034553"},{"annotations":[78783,109629,61234,114910,80229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034551"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial respiratory chain complex or between respiratory chain complexes to form high-order structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00449":null,"SJAG_00703":null,"SJAG_00852":null,"SJAG_01140":null,"SJAG_01141":null,"SJAG_01405":null,"SJAG_01503":null,"SJAG_01838":null,"SJAG_01895":null,"SJAG_01996":null,"SJAG_02229":null,"SJAG_02480":null,"SJAG_02975":null,"SJAG_02979":null,"SJAG_03046":null,"SJAG_03099":null,"SJAG_03296":null,"SJAG_03322":null,"SJAG_03337":null,"SJAG_03574":null,"SJAG_04116":null,"SJAG_04348":null,"SJAG_04450":null,"SJAG_04553":null,"SJAG_04560":null,"SJAG_04603":null,"SJAG_04899":null,"SJAG_05199":null,"SJAG_05302":null,"SJAG_05305":null,"SJAG_05398":null,"SJAG_06046":null,"SJAG_06135":null,"SJAG_06392":null,"SJAG_06468":null,"SJAG_07005":null,"SJAG_07008":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0007005"],"is_obsolete":false,"name":"mitochondrial respiratory chain complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033108","terms_by_termid":{"GO:0033615":null,"GO:0033617":null,"GO:0034551":null,"GO:0034553":null,"GO:0097250":null}}


id: PBO:0060063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 10","termid":"PBO:0060063"}


id: GO:2000210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anoikis.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of anoikis","termid":"GO:2000209"},{"relation_name":"positively_regulates","term_name":"anoikis","termid":"GO:0043276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of anoikis","synonyms":[{"name":"positive regulation of detachment induced cell death","type":"exact"},{"name":"positive regulation of suspension induced apoptosis","type":"exact"}],"termid":"GO:2000210"}


id: GO:0046841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving trisporic acid, a carotenoic acid derivative used as a pheromone in some species of Zygomycota.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"trisporic acid metabolic process","synonyms":[{"name":"trisporic acid metabolism","type":"exact"}],"termid":"GO:0046841"}


id: PBO:0031081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_metabolism_phenotype","termid":"PBO:0031081"}


id: PBO:0079559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAC2 antisense RNA 1","termid":"PBO:0079559"}


id: PBO:0056786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microfibril associated protein 3","termid":"PBO:0056786"}


id: PBO:0002865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR56 (predicted)","termid":"PBO:0002865"}


id: FYPO:0002219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation, or disjunction, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic chromosome segregation","termid":"FYPO:0003176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal chromosome disjunction at meiosis I","synonyms":[{"name":"normal chromosome disjunction at first meiotic nuclear division","type":"exact"},{"name":"normal homologous chromosome segregation","type":"exact"}],"termid":"FYPO:0002219"}


id: GO:0000006
data:
  {"annotated_genes":["SJAG_04185"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106193],"is_not":false,"summary":null,"term":"GO:0000006"}]},"cv_name":"molecular_function","definition":"Enables the transfer of zinc ions (Zn2+) from one side of a membrane to the other, probably powered by proton motive force. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["TC:2.A.5.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion transmembrane transporter activity","termid":"GO:0005385"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"high-affinity zinc transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"high affinity zinc uptake transmembrane transporter activity","type":"exact"},{"name":"high-affinity zinc uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0000006","terms_by_termid":{"GO:0000006":null}}


id: GO:0042765
data:
  {"annotated_genes":["SJAG_02776","SJAG_05278","SJAG_00846","SJAG_03292","SJAG_03672"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72527,72767,76500,76502,77303],"is_not":false,"summary":null,"term":"GO:0042765"}]},"cv_name":"cellular_component","definition":"An enzyme complex which in humans and yeast consists of at least five proteins; for example, the complex contains GAA1, GPI8, PIG-S, PIG-U, and PIG-T in human, and Gaa1p, Gab1p, Gpi8p, Gpi16p, and Gpi17p in yeast. Catalyzes the posttranslational attachment of the carboxy-terminus of a precursor protein to a GPI-anchor.","definition_xrefs":["GOC:rb","PMID:12802054","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"caspase complex","termid":"GO:0008303"},{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00846":null,"SJAG_02776":null,"SJAG_03292":null,"SJAG_03672":null,"SJAG_05278":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575","GO:0005789","GO:0005783"],"is_obsolete":false,"name":"GPI-anchor transamidase complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"GPIT complex","type":"exact"}],"termid":"GO:0042765","terms_by_termid":{"GO:0042765":null}}


id: PBO:0068225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 532","termid":"PBO:0068225"}


id: MONDO:0008222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Andersen's syndrome (AS) is a rare disorder characterized by periodic muscle paralysis, prolongation of the QT interval with a variety of ventricular arrhythmias (leading to predisposition to sudden cardiac death) and characteristic physical features: short stature, scoliosis, low-set ears, hypertelorism, broad nasal root, micrognathia, clinodactyly, brachydactyly and syndactyly.","definition_xrefs":["Orphanet:37553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial periodic paralysis","termid":"MONDO:0000995"},{"relation_name":"is_a","term_name":"muscular channelopathy","termid":"MONDO:0019119"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005267"],"is_obsolete":false,"name":"Andersen-Tawil syndrome","secondary_identifiers":["MEDGEN:327586","DOID:0050434","ICD9:759.89","UMLS:C1563715","GARD:9453","NANDO:1200827","NCIT:C84559","SCTID:422348008","OMIM:170390","MESH:D050030","NORD:1883"],"synonyms":[{"name":"ATS","type":"broad"},{"name":"Andersen cardiodysrhythmic periodic paralysis","type":"exact"},{"name":"Andersen syndrome","type":"exact"},{"name":"Andersen-Tawil syndrome","type":"exact"},{"name":"LQT7","type":"exact"},{"name":"Potassium-sensitive cardiodysrhythmic type","type":"exact"},{"name":"Potassium-sensitive periodic paralysis, ventricular ectopy, and dysmorphic features","type":"related"},{"name":"cardiodysrhythmic potassium-sensitive periodic paralysis","type":"related"},{"name":"long QT syndrome 7","type":"exact"},{"name":"long QT syndrome type 7","type":"exact"},{"name":"periodic paralysis, Potassium-sensitive cardiodysrhythmic type","type":"related"}],"termid":"MONDO:0008222","xrefs":{"Monarch":{"xref_id":"0008222"}}}


id: PBO:0068294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase 3","termid":"PBO:0068294"}


id: PBO:0055889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit E","termid":"PBO:0055889"}


id: PR:P09202
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fructose-1,6-bisphosphatase class 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-1,6-bisphosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1198.14c","secondary_identifiers":["UniProtKB:P09202"],"synonyms":[{"name":"D-fructose-1,6-bisphosphate 1-phosphohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"FBPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC1198.14c","type":"related"},{"name":"Spom972h-fbp","type":"exact"}],"termid":"PR:P09202"}


id: PBO:0060771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B5 pseudogene 2","termid":"PBO:0060771"}


id: PBO:0067160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 213, pseudogene","termid":"PBO:0067160"}


id: PBO:0070844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 23","termid":"PBO:0070844"}


id: PBO:0052205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily Q member 2","termid":"PBO:0052205"}


id: PBO:0027655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_regulation_during_cellular_response_to_ionizing_radiation_during_mitotic_G2_phase","termid":"PBO:0027655"}


id: MONDO:0006807
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rupture in the wall of the small or large intestine due to traumatic or pathologic processes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intestinal perforation","secondary_identifiers":["EFO:1000987","UMLS:C0021845","MESH:D007416","MEDGEN:9525","ICD9:777.6","ICD9:569.83","MedDRA:10022694","DOID:2074","NCIT:C39611","SCTID:56905009"],"synonyms":[{"name":"bowel perforation","type":"exact"},{"name":"perforation of intestine","type":"exact"}],"termid":"MONDO:0006807","xrefs":{"Monarch":{"xref_id":"0006807"}}}


id: GO:1904982
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The process in which sucrose is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sucrose transport","termid":"GO:0015770"},{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"sucrose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1904982","terms_by_termid":{"GO:0106082":null}}


id: GO:0000749
data:
  {"annotated_genes":["SJAG_00990","SJAG_00993","SJAG_01718","SJAG_02923","SJAG_03209","SJAG_01978","SJAG_03340","SJAG_01345"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107547],"is_not":false,"summary":null,"term":"GO:0000749"},{"annotations":[91242,108307,99054,95332,98397,66068],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071507"},{"annotations":[72663],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000750"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pheromone stimulus that positively regulates the process of conjugation with cellular fusion. An example of this process is found in Saccharomyces cerevisiae.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to pheromone","termid":"GO:0071444"},{"relation_name":"positively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00990":null,"SJAG_00993":null,"SJAG_01345":null,"SJAG_01718":null,"SJAG_01978":null,"SJAG_02923":null,"SJAG_03209":null,"SJAG_03340":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"positively_regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"response to pheromone triggering conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0007328","GO:0030434"],"synonyms":[{"name":"response to pheromone during conjugation with cellular fusion","type":"related"}],"termid":"GO:0000749","terms_by_termid":{"GO:0000749":null,"GO:0000750":null,"GO:0071507":null}}


id: GO:0055079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of aluminum ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:lr","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aluminum ion homeostasis (obsolete GO:0055079)","synonyms":[{"name":"aluminium ion homeostasis","type":"exact"}],"termid":"GO:0055079"}


id: GO:0035935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of an androgen into the circulatory system. Androgens are steroid hormones that stimulate or control the development and maintenance of masculine characteristics in vertebrates.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid hormone secretion","termid":"GO:0035929"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"androgen secretion","termid":"GO:0035935"}


id: GO:0003020
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which information about the levels of oxygen are received and are converted to a molecular signal by chemoreceptors in the carotid bodies and the aortic bodies.","definition_xrefs":["ISBN:0323031951","GOC:mtg_cardio"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hypoxia","termid":"GO:0070483"},{"relation_name":"part_of","term_name":"detection of hypoxic conditions in blood by chemoreceptor signaling","termid":"GO:0002007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of reduced oxygen by chemoreceptor signaling","synonyms":[{"name":"detection of reduced oxygen by chemoreceptor signalling","type":"exact"}],"termid":"GO:0003020"}


id: MOD:01718
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a Proteome Sciences TMT6plex reporter+balance group.","definition_xrefs":["Unimod:214#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent alpha-amino acylated residue","termid":"MOD:01708"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex reporter+balance reagent acylated N-terminal","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01718"}


id: GO:0050853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the cross-linking of an antigen receptor on a B cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen receptor-mediated signaling pathway","termid":"GO:0050851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"B cell receptor signaling pathway","synonyms":[{"name":"B cell receptor signalling pathway","type":"exact"},{"name":"B lymphocyte receptor signaling pathway","type":"exact"},{"name":"B lymphocyte receptor signalling pathway","type":"exact"},{"name":"B-cell receptor signaling pathway","type":"exact"},{"name":"B-cell receptor signalling pathway","type":"exact"},{"name":"B-lymphocyte receptor signaling pathway","type":"exact"},{"name":"B-lymphocyte receptor signalling pathway","type":"exact"}],"termid":"GO:0050853"}


id: PBO:0117014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCTD14 antisense RNA 2","termid":"PBO:0117014"}


id: PBO:0001340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft3","termid":"PBO:0001340"}


id: PBO:0029809
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_germinated_spores_with_elongated_germ_tubes_and_cells_with_normal_morphology_(obsolete_FYPO:0002428)","termid":"PBO:0029809"}


id: GO:0033290
data:
  {"annotated_genes":["SJAG_04891","SJAG_03147","SJAG_02376","SJAG_02390","SJAG_03472","SJAG_00662","SJAG_03732","SJAG_04900","SJAG_03629","SJAG_04744","SJAG_02628","SJAG_04981","SJAG_02164"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59705,60393,60550,63458,64523,64932,65170,70481,71534,79569,97878,98860,100386],"is_not":false,"summary":null,"term":"GO:0033290"}]},"cv_name":"cellular_component","definition":"The protein-ribosome-tRNA complex that has just recognized the start codon of a capped mRNA. It is composed of the small ribosomal subunit, eukaryote initiation factors (eIF) eIF3 complex, eIF1, eIF1A, eIF2-GDP, eIF4 complex and initiatior-methionine-tRNA. Recognition of the start codon triggers downstream steps in the pathway, including eIF1 dissociation; Pi release from eIF2; and conversion to the closed, scanning-arrested conformation of the PIC.","definition_xrefs":["GOC:hjd","PMID:24319994","PMID:16510876","PMID:24499181","PMID:29735639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic translation preinitiation complex","termid":"GO:0070993"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00662":null,"SJAG_02164":null,"SJAG_02376":null,"SJAG_02390":null,"SJAG_02628":null,"SJAG_03147":null,"SJAG_03472":null,"SJAG_03629":null,"SJAG_03732":null,"SJAG_04744":null,"SJAG_04891":null,"SJAG_04900":null,"SJAG_04981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"eukaryotic 48S preinitiation complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016283"],"synonyms":[{"name":"eukaryotic 48S initiation complex","type":"related"},{"name":"eukaryotic 48S pre-initiation complex","type":"exact"}],"termid":"GO:0033290","terms_by_termid":{"GO:0033290":null}}


id: GO:0120207
data:
  {"annotated_genes":["SJAG_02572"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89998],"is_not":false,"summary":null,"term":"GO:0120207"}]},"cv_name":"biological_process","definition":"The process of selecting and or marking the position where endocytosis will occur.","definition_xrefs":["PMID:30044717","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"},{"relation_name":"part_of","term_name":"endocytosis","termid":"GO:0006897"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02572":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"endocytosis, site selection","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120207","terms_by_termid":{"GO:0120207":null}}


id: SO:0001762
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A quality inhering in a variant by virtue of its origin.","definition_xrefs":["SO:ke","PMID:17597783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variant_quality","termid":"SO:0001761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_origin","synonyms":[{"name":"variant origin","type":"exact"}],"termid":"SO:0001762"}


id: PBO:0060086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 33","termid":"PBO:0060086"}


id: MONDO:0005465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal mental state resulting from an abuse of methamphetamine","definition_xrefs":["EFO:0005242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"methamphetamine-induced psychosis","termid":"MONDO:0005465","xrefs":{"Monarch":{"xref_id":"0005465"}}}


id: PBO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide N-glycanase Ngl1","termid":"PBO:0032753"}


id: RO:0002593
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x existence starts at point y if and only if the time point at which x starts is equivalent to the time point at which y ends.","direct_ancestors":[{"relation_name":"is_a","term_name":"relation_between_structure_and_stage","termid":"RO:0002487"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"existence_ends_at_point","termid":"RO:0002593"}


id: MONDO:1010588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, cattle","secondary_identifiers":["OMIA:000424-9913"],"termid":"MONDO:1010588","xrefs":{"Monarch":{"xref_id":"1010588"}}}


id: GO:0030222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized myeloid precursor cell acquires the specializes features of an eosinophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"granulocyte differentiation","termid":"GO:0030851"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil differentiation","secondary_identifiers":["GO:0035856"],"synonyms":[{"name":"eosinophil cell development","type":"related"},{"name":"eosinophil cell differentiation","type":"exact"},{"name":"eosinophil development","type":"related"}],"termid":"GO:0030222"}


id: PBO:0056104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY6/PLAUR domain containing 9, pseudogene","termid":"PBO:0056104"}


id: GO:0035931
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any mineralocorticoid into the circulatory system. Mineralocorticoids are a class of steroid hormones that regulate water and electrolyte metabolism.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mineralocorticoid secretion","termid":"GO:0035931"}


id: PBO:0059255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L21","termid":"PBO:0059255"}


id: GO:0071945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates flagellum-dependent motility in bacteria by modulating the speed or direction of rotation of a rotary flagellar motor, mediated by interactions between the braking protein.","definition_xrefs":["PMID:20371342","GOC:cilia","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of bacterial-type flagellum-dependent cell motility","termid":"GO:1902021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bacterial-type flagellum-dependent cell motility by regulation of motor speed","synonyms":[{"name":"regulation of bacterial-type flagellar cell motility by regulation of motor speed","type":"related"},{"name":"regulation of bacterial-type flagellum cell motility by regulation of motor speed","type":"exact"},{"name":"regulation of flagellar cell motility by regulation of motor speed","type":"broad"}],"termid":"GO:0071945"}


id: MONDO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pneumothorax","termid":"MONDO:0002076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous tension pneumothorax","secondary_identifiers":["MEDGEN:510132","icd11.foundation:304972724","ICD9:512.0","SCTID:196102003","UMLS:C0155907","DOID:1672","ICD10CM:J93.0"],"termid":"MONDO:0002075","xrefs":{"Monarch":{"xref_id":"0002075"}}}


id: PBO:0075948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stromal antigen 3-like 3 (pseudogene)","termid":"PBO:0075948"}


id: GO:0031425
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The conversion of a primary RNA molecule transcribed from a chloroplast genome into one or more mature RNA molecules.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA processing","termid":"GO:0006396"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"chloroplast RNA processing","termid":"GO:0031425"}


id: MOD:00418
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with an (pyridin-3-yl)acetyl group.","definition_xrefs":["PubMed:9276974","Unimod:25"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridylacetylated residue","synonyms":[{"name":"Pyridylacetyl","type":"related"},{"name":"pyridylacetyl","type":"related"}],"termid":"MOD:00418"}


id: MONDO:0009060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystic disease of lung","secondary_identifiers":["UMLS:C0555214","MESH:C563237","MEDGEN:640840","OMIM:219600"],"synonyms":[{"name":"cystic disease of lung","type":"exact"}],"termid":"MONDO:0009060","xrefs":{"Monarch":{"xref_id":"0009060"}}}


id: MONDO:0100186
data:
  {"annotated_genes":["SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87400],"is_not":false,"summary":null,"term":"MONDO:0100186"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperphenylalaninemia due to tetrahydrobiopterin deficiency","termid":"MONDO:0016543"},{"relation_name":"is_a","term_name":"GTP cyclohydrolase I deficiency","termid":"MONDO:0100184"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"GTP cyclohydrolase I deficiency with hyperphenylalaninemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112225","Orphanet:2102","OMIM:233910","SCTID:23447005","NCIT:C141442","GARD:2844"],"synonyms":[{"name":"GTP cyclohydrolase 1 deficiency","type":"related"},{"name":"GTP cyclohydrolase I deficiency","type":"related"},{"name":"GTPCH deficiency","type":"exact"},{"name":"HPABH4B","type":"related"},{"name":"hyperphenylalaninemia due to GTP cyclohydrolase deficiency","type":"exact"},{"name":"hyperphenylalaninemia, BH4-deficient, B","type":"related"},{"name":"hyperphenylalaninemia, Bh4-deficient, type B","type":"exact"},{"name":"hyperphenylalaninemia, tetrahydrobiopterin-deficient, due to GTP cyclohydrolase 1 deficiency","type":"related"}],"termid":"MONDO:0100186","terms_by_termid":{"MONDO:0100186":null},"xrefs":{"Monarch":{"xref_id":"0100186"}}}


id: MONDO:0019106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disseminated peritoneal leiomyomatosis (obsolete MONDO:0019106)","termid":"MONDO:0019106","xrefs":{"Monarch":{"xref_id":"0019106"}}}


id: FYPO:0006939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring contraction progresses in a radially asymmetric fashion.","definition_xrefs":["PomBase:mah","PMID:30709916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0004803","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"asymmetric actomyosin contractile ring contraction","synonyms":[{"name":"asymmetric actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"asymmetric actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"non-concentric actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0006939"}


id: PBO:0089471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L51-bS1m","termid":"PBO:0089471"}


id: MONDO:0018582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare tumor of pancreas caused by mutations in the GCGR gene characterized by pancreatic alpha cell hyperplasia, pancreatic neuroendocrine tumors and markedly increased serum glucagon levels in the absence of a glucagonoma syndrome. Clinical manifestations may include abdominal pain, pancreatitis, fatigue, diarrhea, and diabetes mellitus.","definition_xrefs":["Orphanet:438274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pancreatic neoplasm","termid":"MONDO:0021040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"GCGR-related hyperglucagonemia","secondary_identifiers":["MEDGEN:1677024","GARD:10460","OMIM:619290","UMLS:C4763635","DOID:0112306"],"synonyms":[{"name":"MVAH","type":"exact"},{"name":"Mahvash disease","type":"exact"},{"name":"alpha-cell hyperplasia with glucagonemia","type":"exact"},{"name":"nesidioblastosis alpha cell hyperplasia microglucagonoma and nonfunctioning islet cell tumor","type":"exact"},{"name":"nesidioblastosis alpha cell hyperplasia microglucagonoma and nonfunctioning islet cell tumour","type":"exact"},{"name":"nesidioblastosis, alpha cell hyperplasia, microglucagonoma, and nonfunctioning islet cell tumor","type":"exact"},{"name":"nesidioblastosis, alpha cell hyperplasia, microglucagonoma, and nonfunctioning islet cell tumour","type":"exact"}],"termid":"MONDO:0018582","xrefs":{"Monarch":{"xref_id":"0018582"}}}


id: GO:0047638
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: albendazole + H+ + NADPH + O2 = albendazole S-oxide + H2O + NADP+.","definition_xrefs":["RHEA:10796","EC:1.14.13.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"albendazole monooxygenase activity","secondary_identifiers":["MetaCyc:ALBENDAZOLE-MONOOXYGENASE-RXN","KEGG_REACTION:R03712"],"synonyms":[{"name":"albendazole oxidase activity","type":"related"},{"name":"albendazole sulfoxidase activity","type":"related"},{"name":"albendazole,NADPH:oxygen oxidoreductase (sulfoxide-forming)","type":"related"}],"termid":"GO:0047638"}


id: GO:0080021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a benzoic acid stimulus.","definition_xrefs":["PMID:18753285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to benzoic acid","synonyms":[{"name":"response to benzoic acid stimulus","type":"exact"}],"termid":"GO:0080021"}


id: MONDO:0015946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic epidermal disorder (obsolete MONDO:0015946)","secondary_identifiers":["Orphanet:183426"],"synonyms":[{"name":"genetic epidermal disorder","type":"related"}],"termid":"MONDO:0015946","xrefs":{"Monarch":{"xref_id":"0015946"}}}


id: GO:1900911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of olefin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"olefin biosynthetic process","termid":"GO:1900674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of olefin biosynthetic process","synonyms":[{"name":"regulation of olefin anabolism","type":"exact"},{"name":"regulation of olefin biosynthesis","type":"exact"},{"name":"regulation of olefin formation","type":"exact"},{"name":"regulation of olefin synthesis","type":"exact"}],"termid":"GO:1900911"}


id: GO:0031414
data:
  {"annotated_genes":["SJAG_02920","SJAG_04131","SJAG_01826","SJAG_03045","SJAG_03215","SJAG_02726","SJAG_04179","SJAG_04631","SJAG_06449"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79305,77915,71983,72872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031415"},{"annotations":[79876,72599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031416"},{"annotations":[77196,68648,74331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031417"}]},"cv_name":"cellular_component","definition":"A complex that catalyzes the transfer of an acetyl group to the N-terminal residue of a protein acceptor molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein acetyltransferase complex","termid":"GO:0031248"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":9,"genes_by_uniquename":{"SJAG_01826":null,"SJAG_02726":null,"SJAG_02920":null,"SJAG_03045":null,"SJAG_03215":null,"SJAG_04131":null,"SJAG_04179":null,"SJAG_04631":null,"SJAG_06449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"N-terminal protein acetyltransferase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"NAT complex","type":"exact"}],"termid":"GO:0031414","terms_by_termid":{"GO:0031415":null,"GO:0031416":null,"GO:0031417":null}}


id: PBO:0028377
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_xanthine_DNA_N-glycosylase_activity","termid":"PBO:0028377"}


id: MONDO:0004740
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hyperlysinemia (obsolete MONDO:0004740)","termid":"MONDO:0004740","xrefs":{"Monarch":{"xref_id":"0004740"}}}


id: PBO:0050702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family B (small) member 1","termid":"PBO:0050702"}


id: PBO:0060104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 5","termid":"PBO:0060104"}


id: GO:0018179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The desulfurization of peptidyl-L-cysteine to yield L-alanine and elemental sulfur; peptidyl-L-cysteine persulfide is an intermediate.","definition_xrefs":["RESID:AA0269"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine desulfurization (obsolete GO:0018179)","synonyms":[{"name":"peptidyl-cysteine desulfurization","type":"exact"},{"name":"peptidyl-cysteine desulphurization","type":"exact"}],"termid":"GO:0018179"}


id: GO:0003780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Interacting selectively with two actin filaments to anchor them together.","definition_xrefs":["GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cross-linking activity (obsolete GO:0003780)","synonyms":[{"name":"actin cross-linking activity","type":"exact"}],"termid":"GO:0003780"}


id: PBO:0066562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid domain containing 1","termid":"PBO:0066562"}


id: PBO:0068101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 408","termid":"PBO:0068101"}


id: GO:0045191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin production","termid":"GO:0002637"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"is_a","term_name":"regulation of B cell activation","termid":"GO:0050864"},{"relation_name":"regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"regulation of isotype switching","synonyms":[{"name":"regulation of class switch recombination","type":"exact"},{"name":"regulation of class switching","type":"exact"},{"name":"regulation of isotype switch recombination","type":"exact"}],"termid":"GO:0045191"}


id: PBO:0066236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 43 pseudogene 1","termid":"PBO:0066236"}


id: GO:0150152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-17A production.","definition_xrefs":["PMID:27901018","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of interleukin-17 production","termid":"GO:0032700"},{"relation_name":"is_a","term_name":"regulation of interleukin-17A production","termid":"GO:0150151"},{"relation_name":"negatively_regulates","term_name":"interleukin-17A production","termid":"GO:0097087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-17A production","synonyms":[{"name":"negative regulation of interleukin-17A biosynthetic process","type":"narrow"}],"termid":"GO:0150152"}


id: GO:0019542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of propionate, the anion derived from propionic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"propionate metabolic process","termid":"GO:0019541"},{"relation_name":"is_a","term_name":"short-chain fatty acid biosynthetic process","termid":"GO:0051790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"propionate biosynthetic process","synonyms":[{"name":"propionate anabolism","type":"exact"},{"name":"propionate biosynthesis","type":"exact"},{"name":"propionate formation","type":"exact"},{"name":"propionate synthesis","type":"exact"}],"termid":"GO:0019542"}


id: PBO:0017509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rcl1 (predicted)","termid":"PBO:0017509"}


id: PBO:0081100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger E-box binding homeobox 1","termid":"PBO:0081100"}


id: PBO:0090872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Gos1","termid":"PBO:0090872"}


id: PBO:0031899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane signaling receptor Wsc1 (predicted)","termid":"PBO:0031899"}


id: GO:0033412
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UAG codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0060090","GO:0005488"],"is_obsolete":false,"name":"UAG codon-amino acid adaptor activity","synonyms":[{"name":"TAG codon-amino acid adaptor activity","type":"exact"}],"termid":"GO:0033412"}


id: PR:O60164
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pescadillo that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12221:SF6","OMA:SCHPO03820","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F5.05c","secondary_identifiers":["UniProtKB:O60164"],"synonyms":[{"name":"Spom972h-PES1","type":"exact"},{"name":"nucleolar protein 7 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60164"}


id: PBO:0053018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LAMTOR5 antisense RNA 1","termid":"PBO:0053018"}


id: PBO:0090831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Has1","termid":"PBO:0090831"}


id: PATO:0000721
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000721 absolute yield value (obsolete PATO:0000721)","termid":"PATO:0000721"}


id: PBO:0060013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 1","termid":"PBO:0060013"}


id: MONDO:0009348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classical Hodgkin lymphoma (CHL) is a B-cell lymphoma characterized histologically by the presence of large mononuclear Hodgkin cells and multinucleated Reed-Sternberg (HRS) cells.","definition_xrefs":["Orphanet:391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hodgkins lymphoma","termid":"MONDO:0004952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"classic Hodgkin lymphoma","secondary_identifiers":["GARD:16529","ONCOTREE:CHL","icd11.foundation:1616050398","NCIT:C7164","MEDGEN:9283","OMIM:236000","UMLS:C0019829"],"synonyms":[{"name":"Chl","type":"related"},{"name":"Hodgkin disease","type":"related"},{"name":"Hodgkin lymphoma, susceptibility to","type":"related"},{"name":"classic Hodgkin disease","type":"exact"},{"name":"classical Hodgkin lymphoma","type":"exact"},{"name":"classical Hodgkin's lymphoma","type":"exact"},{"name":"lymphoma, Hodgkin, classic","type":"related"}],"termid":"MONDO:0009348","xrefs":{"Monarch":{"xref_id":"0009348"}}}


id: PBO:0088247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S11","termid":"PBO:0088247"}


id: MONDO:0012945
data:
  {"annotated_genes":["SJAG_02289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88765],"is_not":false,"summary":null,"term":"MONDO:0012945"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the FIG4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612577","MEDGEN:393399","MESH:C567244","DOID:0060202","UMLS:C2675491","GARD:10496"],"synonyms":[{"name":"ALS11","type":"exact"},{"name":"FIG4 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 11","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in FIG4","type":"exact"},{"name":"amyotrophic lateral sclerosis type 11","type":"exact"}],"termid":"MONDO:0012945","terms_by_termid":{"MONDO:0012945":null},"xrefs":{"Monarch":{"xref_id":"0012945"}}}


id: PBO:0051903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 10","termid":"PBO:0051903"}


id: PBO:0063558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pellino E3 ubiquitin protein ligase family member 2","termid":"PBO:0063558"}


id: PBO:0039350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosylmethionine decarboxylase 1","termid":"PBO:0039350"}


id: PBO:0041311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 50","termid":"PBO:0041311"}


id: MONDO:0002702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the ovary and is characterized by the presence of cystic structures. It includes the serous cystadenocarcinoma, mucinous cystadenocarcinoma, and clear cell cystadenocarcinoma.","definition_xrefs":["NCIT:C5228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian adenocarcinoma","termid":"MONDO:0002752"},{"relation_name":"is_a","term_name":"cystadenocarcinoma","termid":"MONDO:0005596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian cystadenocarcinoma","secondary_identifiers":["SCTID:314191009","UMLS:C1096638","MEDGEN:242756","DOID:3605","EFO:1001962"],"synonyms":[{"name":"cystadenocarcinoma of ovary","type":"exact"},{"name":"cystadenocarcinoma of the ovary","type":"exact"},{"name":"ovarian cystadenocarcinoma","type":"exact"},{"name":"ovary cystadenocarcinoma","type":"exact"}],"termid":"MONDO:0002702","xrefs":{"Monarch":{"xref_id":"0002702"}}}


id: GO:0042735
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bounded plant organelle found in the developing endosperm, contains storage proteins.","definition_xrefs":["GOC:jl","PMID:7704047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"endosperm protein body","termid":"GO:0042735"}


id: MOD:00415
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod - OBSOLETE because Unimod entry 22 is now merged with entry 21 remap to MOD:00696 'phosphorylated residue'.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00415 phosphorylation without neutral loss (obsolete MOD:00415)","termid":"MOD:00415"}


id: PBO:0068005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 307","termid":"PBO:0068005"}


id: PBO:0082833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of 66S pre-ribosomal particles; forms a complex with Nop7p and Ytm1p that is required for maturation of the large ribosomal subunit; required for maturation of the 25S and 5.8S ribosomal RNAs; binds RNA via its C-terminal domain; homologous to mammalian Bop1","termid":"PBO:0082833"}


id: PBO:0039143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 2","termid":"PBO:0039143"}


id: PBO:0054903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2317","termid":"PBO:0054903"}


id: PBO:0009980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM complex subunit Mcm4/Cdc21","termid":"PBO:0009980"}


id: PBO:0034762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain Clc1","termid":"PBO:0034762"}


id: GO:0031659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cyclin-dependent protein serine/threonine kinase activity contributing to the G1/S transition of the cell cycle.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mah","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclin-dependent protein serine/threonine kinase activity involved in G1/S transition of mitotic cell cycle (obsolete GO:0031659)","synonyms":[{"name":"G1/S-specific activation of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G1/S-specific positive regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific stimulation of cyclin-dependent protein kinase activity","type":"narrow"},{"name":"G1/S-specific up regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific up-regulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"G1/S-specific upregulation of cyclin-dependent protein kinase activity","type":"exact"},{"name":"positive regulation of cyclin-dependent protein kinase activity during G1/S","type":"related"},{"name":"positive regulation of cyclin-dependent protein kinase activity involved in G1/S","type":"broad"}],"termid":"GO:0031659"}


id: GO:0047907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (E)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide = (Z)-2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide.","definition_xrefs":["RHEA:21848","EC:5.2.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"furylfuramide isomerase activity","secondary_identifiers":["MetaCyc:FURYLFURAMIDE-ISOMERASE-RXN","KEGG_REACTION:R04538"],"synonyms":[{"name":"2-(2-furyl)-3-(5-nitro-2-furyl)acrylamide cis-trans-isomerase activity","type":"related"}],"termid":"GO:0047907"}


id: FYPO:0002076
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is elongated, has a nucleus that is broken into multiple small fragments, forms a septum that is thicker than normal, and is inviable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"has_part","term_name":"fragmented nucleus during vegetative growth","termid":"FYPO:0001919"},{"relation_name":"is_a","term_name":"increased septum thickness","termid":"FYPO:0001406"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell with abnormal septum","termid":"FYPO:0002889"},{"relation_name":"is_a","term_name":"inviable elongated vegetative cell with fragmented nucleus","termid":"FYPO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002403"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0002403","FYPO:0000631","FYPO:0000005"],"is_obsolete":false,"name":"inviable elongated cell with fragmented nucleus and increased septum thickness","synonyms":[{"name":"elongated inviable cell with fragmented nuclear material and increased septum thickness","type":"exact"},{"name":"elongated inviable cell with fragmented nuclei and increased septum thickness","type":"exact"},{"name":"elongated inviable cell with fragmented nucleus and increased septum thickness","type":"exact"},{"name":"elongated inviable cell with fragmented nucleus and increased septum thickness during vegetative growth","type":"exact"},{"name":"inviable elongated cell with fragmented nuclear DNA and increased septum thickness","type":"related"},{"name":"inviable elongated cell with fragmented nucleus and increased septum thickness during mitotic cell cycle","type":"related"},{"name":"lethal; elongated cell with fragmented nucleus and increased septum thickness","type":"exact"},{"name":"long inviable cell with fragmented nucleus and increased septum thickness","type":"exact"}],"termid":"FYPO:0002076"}


id: MONDO:0014459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Adams-Oliver syndrome in which the cause of the disease is a mutation in the NOTCH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Adams-Oliver syndrome","termid":"MONDO:0007034"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Adams-Oliver syndrome 5","secondary_identifiers":["MEDGEN:863407","OMIM:616028","GARD:16049","UMLS:C4014970"],"synonyms":[{"name":"AOS5","type":"related"},{"name":"Adams-Oliver syndrome 5","type":"exact"},{"name":"Adams-Oliver syndrome caused by mutation in NOTCH1","type":"exact"},{"name":"Adams-Oliver syndrome caused by mutation in Notch1","type":"exact"},{"name":"Adams-Oliver syndrome type 5","type":"exact"},{"name":"NOTCH1 Adams-Oliver syndrome","type":"exact"},{"name":"Notch1 Adams-Oliver syndrome","type":"exact"}],"termid":"MONDO:0014459","xrefs":{"Monarch":{"xref_id":"0014459"}}}


id: PBO:0090258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related endocytic ubiquitin ligase substrate adaptor Aly2","termid":"PBO:0090258"}


id: GO:1990426
data:
  {"annotated_genes":["SJAG_01374","SJAG_03300","SJAG_01221","SJAG_01076","SJAG_02198","SJAG_01410","SJAG_02214","SJAG_04272","SJAG_01584","SJAG_02439","SJAG_03898","SJAG_01677","SJAG_01832","SJAG_03843","SJAG_03780","SJAG_02992","SJAG_02822","SJAG_02079"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65348,91177,92958,96843,97083,98026,98192,100254,100963,109764,109788,111122,111600,114575,118865],"is_not":false,"summary":null,"term":"GO:1990426"},{"annotations":[118477,91007,108160],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Replication fork processing that includes recombination between DNA near the arrested fork and homologous sequences. Proteins involved in homologous recombination are required for replication restart.","definition_xrefs":["PMID:23093942","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replication fork processing","termid":"GO:0031297"},{"relation_name":"is_a","term_name":"mitotic DNA replication maintenance of fidelity","termid":"GO:1990505"}],"gene_count":18,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02214":null,"SJAG_02439":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03300":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04272":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic recombination-dependent replication fork processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1903211"],"synonyms":[{"name":"homologous recombination dependent replication fork recovery","type":"related"},{"name":"homologous recombination-dependent replication fork processing","type":"exact"},{"name":"mitotic recombination involved in collapsed replication fork processing","type":"exact"},{"name":"mitotic recombination involved in recovery from replication fork arrest","type":"exact"},{"name":"mitotic recombination involved in recovery from replication fork stalling","type":"exact"},{"name":"mitotic recombination involved in replication fork processing","type":"related"},{"name":"mitotic recombination involved in replication fork restart","type":"related"},{"name":"mitotic recombination involved in replication restart","type":"related"}],"termid":"GO:1990426","terms_by_termid":{"GO:0120292":null,"GO:1990426":null}}


id: PBO:0042946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2","termid":"PBO:0042946"}


id: GO:0006256
data:
  {"annotated_genes":["SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78404],"is_not":false,"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of UDP, uridine (5'-)diphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside diphosphate catabolic process","termid":"GO:0009195"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"UDP metabolic process","termid":"GO:0046048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03676":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"UDP catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"UDP breakdown","type":"exact"},{"name":"UDP catabolism","type":"exact"},{"name":"UDP degradation","type":"exact"}],"termid":"GO:0006256","terms_by_termid":{"GO:0006256":null}}


id: PBO:0069343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 603, pseudogene","termid":"PBO:0069343"}


id: GO:1901478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of amitrole from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"azole transmembrane transporter activity","termid":"GO:1901474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"aminotriazole transmembrane transporter activity","secondary_identifiers":["GO:0015241"],"synonyms":[{"name":"aminotriazole transporter activity","type":"broad"}],"termid":"GO:1901478"}


id: PBO:0003260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-type ATPase, calcium transporting Cta3","termid":"PBO:0003260"}


id: PBO:0074376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 2","termid":"PBO:0074376"}


id: GO:0019950
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by covalent attachment of the ubiquitin-like protein SMT3 to the target protein.","definition_xrefs":["GOC:jl","PMID:9435231"],"gene_count":0,"genotype_count":0,"name":"obsolete SMT3-dependent protein catabolic process (obsolete GO:0019950)","synonyms":[{"name":"SMT3-dependent protein breakdown","type":"exact"},{"name":"SMT3-dependent protein catabolism","type":"exact"},{"name":"SMT3-dependent protein degradation","type":"exact"}],"termid":"GO:0019950"}


id: GO:0010279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-acetic acid + an amino acid = an indole-3-acetic acid amide conjugate.","definition_xrefs":["PMID:15659623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"indole-3-acetic acid amido synthetase activity","synonyms":[{"name":"IAA amido synthetase activity","type":"exact"},{"name":"IAA amino acid conjugate synthetase activity","type":"exact"},{"name":"IAA amino acid synthetase activity","type":"exact"}],"termid":"GO:0010279"}


id: MONDO:0007328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choroidal osteoma, bilateral","secondary_identifiers":["OMIM:118865","MESH:C566124","UMLS:C1861558","MEDGEN:396164"],"synonyms":[{"name":"choroidal osteoma, bilateral","type":"exact"}],"termid":"MONDO:0007328","xrefs":{"Monarch":{"xref_id":"0007328"}}}


id: PBO:0091840
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae CSE4","termid":"PBO:0091840"}


id: GO:0051214
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNAi-mediated post-transcriptional gene silencing pathway induced by RNA viruses leading to a sequence-specific degradation of target mRNAs or inhibition of translation. In plants, DCL4 is the primary Dicer to detect RNA viruses.","definition_xrefs":["PMID:17693253","PMID:15165191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNAi-mediated antiviral immune response","termid":"GO:0009616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"RNAi-mediated antiviral immunity against RNA virus","synonyms":[{"name":"RNA VIGS","type":"exact"},{"name":"RNA virus induced gene silencing","type":"exact"},{"name":"RNA virus-induced PTGS","type":"exact"},{"name":"RNA virus-induced gene silencing","type":"exact"}],"termid":"GO:0051214"}


id: PBO:0013804
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HUT1","termid":"PBO:0013804"}


id: GO:0062168
data:
  {"annotated_genes":["SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103466],"is_not":false,"summary":null,"term":"GO:0062168"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of plus-end directed microtubule sliding.","definition_xrefs":["PMID:21892183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of plus-end directed microtubule sliding","termid":"GO:0062169"},{"relation_name":"negatively_regulates","term_name":"plus-end directed microtubule sliding","termid":"GO:0031535"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of plus-end directed microtubule sliding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0062168","terms_by_termid":{"GO:0062168":null}}


id: PBO:0029068
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_during_cellular_response_to_nitric_oxide","termid":"PBO:0029068"}


id: PBO:0042169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCM2 like scaffold protein","termid":"PBO:0042169"}


id: PBO:0071854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 49","termid":"PBO:0071854"}


id: PBO:0045102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal membrane arm assembly component 2 like","termid":"PBO:0045102"}


id: SO:1000057
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The changed codon has the same translation product as the original codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000057 sequence_variant_causing_synonymous_codon_change_in_transcript (obsolete SO:1000057)","synonyms":[{"name":"mutation causing synonymous codon change in transcript","type":"related"},{"name":"sequence variant causing synonymous codon change in transcript","type":"exact"}],"termid":"SO:1000057"}


id: MONDO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete episodic pain syndrome, familial (obsolete MONDO:0000157)","termid":"MONDO:0000157","xrefs":{"Monarch":{"xref_id":"0000157"}}}


id: GO:0098548
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the Golgi membrane that faces the cytoplasm.","definition_xrefs":["GOC:dos","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic side of membrane","termid":"GO:0098562"},{"relation_name":"part_of","term_name":"Golgi membrane","termid":"GO:0000139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"}],"interesting_parent_ids":["GO:0005575","GO:0005794","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic side of Golgi membrane","termid":"GO:0098548"}


id: FYPO:0000021
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121554,121560,121549,121586],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spheroid cell","termid":"FYPO:0001955"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03453":null},"genotype_count":4,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"spheroid vegetative cell","references_by_uniquename":{"PMID:29566183":null},"single_locus_annotated_genes":["SJAG_02819","SJAG_01794","SJAG_03453","SJAG_00514"],"single_locus_genotype_uniquenames":["scd2delta","efc25delta","ras1delta","scd1delta"],"synonyms":[{"name":"cell morphology, round vegetative cell","type":"related"},{"name":"cell morphology, rounded vegetative cell","type":"related"},{"name":"rounded vegetative cell","type":"exact"},{"name":"spheroid cell during vegetative growth","type":"exact"},{"name":"spheroid vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000021","terms_by_termid":{"FYECO:0000137":null,"FYPO:0002380":null}}


id: PBO:0071983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 12","termid":"PBO:0071983"}


id: MONDO:1010135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Protoporphyria that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"porphyria, non-human animal","termid":"MONDO:1011418"},{"relation_name":"is_a","term_name":"liver disorder, non-human animal","termid":"MONDO:1012967"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyria, non-human animal","secondary_identifiers":["OMIA:000836"],"termid":"MONDO:1010135","xrefs":{"Monarch":{"xref_id":"1010135"}}}


id: PBO:0085380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane ATP-binding cassette (ABC) transporter; multidrug transporter actively regulated by Pdr1p; also involved in steroid transport, cation resistance, and cellular detoxification during exponential growth; PDR5 has a paralog, PDR15, that arose from the whole genome duplication","termid":"PBO:0085380"}


id: GO:0039637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The breakdown of host DNA, deoxyribonucleic acid, by a virus.","definition_xrefs":["GOC:jl","GOC:bf","GOC:bm"],"gene_count":0,"genotype_count":0,"name":"obsolete catabolism by virus of host DNA (obsolete GO:0039637)","termid":"GO:0039637"}


id: PATO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Pink color having high brightness and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pink","termid":"PATO:0000954"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pale pink","termid":"PATO:0002020"}


id: GO:0042708
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of elastin.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete elastase activity (obsolete GO:0042708)","synonyms":[{"name":"elastase activity","type":"exact"}],"termid":"GO:0042708"}


id: MONDO:0008375
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An eye emergency condition which may lead to blindness if left untreated. It is characterized by the separation of the inner retina layers from the underlying pigment epithelium. Causes include trauma, advanced diabetes mellitus, high myopia, and choroid tumors. Symptoms include sudden appearance of floaters, sudden light flushes, and blurred vision.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal detachment","secondary_identifiers":["NCIT:C26874","DOID:5327","OMIM:180050","ICD9:362.40","MEDGEN:19759","ICD9:361.9","EFO:0005773","UMLS:C0035305","MESH:D012163","OMIM:312530","SCTID:42059000","ICD9:361.89"],"synonyms":[{"name":"detached retina","type":"exact"},{"name":"retina, detached","type":"exact"},{"name":"retinal detachment","type":"exact"}],"termid":"MONDO:0008375","xrefs":{"Monarch":{"xref_id":"0008375"}}}


id: FYPO:0004988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which RNA levels that normally vary over the course of the mitotic cell cycle do not vary, or change in a pattern different from normal. Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah","PMID:15302827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"abnormal RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"abnormal periodic expression of RNA during mitotic cell cycle","type":"exact"},{"name":"abnormal transcript level oscillation during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004988"}


id: MONDO:0017219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microform holoprosencephaly is a benign form of holoprosencephaly (HPE) characterized by midline defects without the typical HPE defect in brain cleavage.","definition_xrefs":["Orphanet:280200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"microform holoprosencephaly","secondary_identifiers":["DOID:0111380","icd11.foundation:44293173","GARD:17290","MEDGEN:1711978","ICD10CM:Q04.2","UMLS:C5393309"],"synonyms":[{"name":"HPE, minor form","type":"exact"},{"name":"HPE-L","type":"exact"},{"name":"HoloprosencC)phalie, minor form","type":"exact"},{"name":"Holoprosencéphalie, minor form","type":"exact"},{"name":"Microform HPE","type":"exact"},{"name":"holoprosencephaly-like","type":"exact"}],"termid":"MONDO:0017219","xrefs":{"Monarch":{"xref_id":"0017219"}}}


id: GO:0160134
data:
  {"annotated_genes":["SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[102484],"is_not":false,"summary":null,"term":"GO:0160134"}]},"cv_name":"molecular_function","definition":"A protein adaptor activity characterized by the capacity to selectively recognize and interact with RNA molecules in a sequence-specific manner. Entities possessing this activity typically exhibit discerning binding preferences for specific nucleotide sequences within RNA molecules, enabling the identification and engagement of distinct RNA motifs or structural elements. This function is integral to various biological processes, including RNA processing, transport, and regulatory mechanisms, contributing to the specificity and precision of cellular RNA-related activities.","definition_xrefs":["PMID:17036044","PMID:14749727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA adaptor activity","termid":"GO:0140517"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0030674"],"is_obsolete":false,"name":"protein-RNA sequence-specific adaptor activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160134","terms_by_termid":{"GO:0160134":null}}


id: FYPO:0003864
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount a specific substance measured in a cell is lower than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell","termid":"FYPO:0000991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased level of substance in cell during G0","synonyms":[{"name":"decreased accumulation of substance in cell during G0","type":"related"},{"name":"decreased level of substance in cell during cell quiescence","type":"exact"},{"name":"decreased level of substance in cell during quiescence","type":"exact"},{"name":"decreased substance level during G0","type":"exact"},{"name":"reduced level of substance in cell during G0","type":"exact"}],"termid":"FYPO:0003864"}


id: SO:1001274
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The incorporation of selenocysteine into a protein sequence is directed by an in-frame UGA codon (usually a stop codon) within the coding region of the mRNA. Selenoprotein mRNAs contain a conserved secondary structure in the 3' UTR that is required for the distinction of UGA stop from UGA selenocysteine. The selenocysteine insertion sequence (SECIS) is around 60 nt in length and adopts a hairpin structure which is sufficiently well-defined and conserved to act as a computational screen for selenoprotein genes.","direct_ancestors":[{"relation_name":"is_a","term_name":"recoding_stimulatory_region","termid":"SO:1001268"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SECIS_element","secondary_identifiers":["http://en.wikipedia.org/wiki/SECIS_element"],"synonyms":[{"name":"SECIS element","type":"exact"}],"termid":"SO:1001274"}


id: PBO:0076889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 43","termid":"PBO:0076889"}


id: PBO:0076459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAL bHLH transcription factor 2","termid":"PBO:0076459"}


id: PBO:0067673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 854, pseudogene","termid":"PBO:0067673"}


id: FYPO:0008163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of nuclear foci are increased.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased number of nuclear foci","termid":"FYPO:0008163"}


id: MONDO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign neoplasm that arises from the Bartholin gland and is characterized by the presence of clustered glands and tubules lined by mucin-secreting epithelial cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bartholin gland benign neoplasm","termid":"MONDO:0002193"},{"relation_name":"is_a","term_name":"vulvar glandular neoplasm","termid":"MONDO:0002198"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartholin gland adenoma","secondary_identifiers":["NCIT:C40299","DOID:5382","MEDGEN:267025","UMLS:C1511048"],"synonyms":[{"name":"Bartholin gland adenoma","type":"exact"},{"name":"Bartholin's gland adenoma","type":"exact"},{"name":"major vestibular gland adenoma","type":"exact"}],"termid":"MONDO:0003419","xrefs":{"Monarch":{"xref_id":"0003419"}}}


id: GO:0043947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of symbiont enzyme activity. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by host of symbiont catalytic activity (obsolete GO:0043947)","synonyms":[{"name":"activation by host of symbiont enzyme activity","type":"narrow"},{"name":"activation of symbiont enzyme activity","type":"narrow"},{"name":"positive regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up regulation by host of symbiont enzyme activity","type":"exact"},{"name":"up-regulation by host of symbiont enzyme activity","type":"exact"},{"name":"upregulation by host of symbiont enzyme activity","type":"exact"}],"termid":"GO:0043947"}


id: GO:0046975
data:
  {"annotated_genes":["SJAG_01193","SJAG_02873"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80540],"is_not":false,"summary":null,"term":"GO:0046975"},{"annotations":[97496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[65548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + histone H3 L-lysine (position 36) = S-adenosyl-L-homocysteine + histone H3 N6-methyl-L-lysine (position 36). This reaction is the addition of a methyl group to the lysine residue at position 36 of the histone H3 protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lysine N-methyltransferase activity","termid":"GO:0016279"},{"relation_name":"is_a","term_name":"histone H3 methyltransferase activity","termid":"GO:0140938"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01193":null,"SJAG_02873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008276","GO:0003674","GO:0140096","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"histone H3K36 methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone H3K36 methylase activity","type":"exact"},{"name":"histone lysine N-methyltransferase activity (H3-K36 specific)","type":"exact"},{"name":"histone methylase activity (H3-K36 specific)","type":"exact"},{"name":"histone methyltransferase activity (H3-K36 specific)","type":"exact"},{"name":"histone-H3K36 methyltransferase activity","type":"exact"}],"termid":"GO:0046975","terms_by_termid":{"GO:0046975":null,"GO:0140954":null,"GO:0140955":null}}


id: GO:0036357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-phosphoglycerate + ATP = 2,3-diphosphoglycerate + ADP.","definition_xrefs":["PMID:8159166","PMID:2226838","GOC:bf","InterPro:IPR020872"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-phosphoglycerate kinase activity (obsolete GO:0036357)","synonyms":[{"name":"2PGK activity","type":"exact"}],"termid":"GO:0036357"}


id: MONDO:0016590
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete collecting duct carcinoma (obsolete MONDO:0016590)","termid":"MONDO:0016590","xrefs":{"Monarch":{"xref_id":"0016590"}}}


id: GO:0004151
data:
  {"annotated_genes":["SJAG_00444"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73556],"is_not":false,"summary":null,"term":"GO:0004151"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + H2O = N-carbamoyl-L-aspartate + H+.","definition_xrefs":["RHEA:24296","EC:3.5.2.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003674","GO:0016810","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"dihydroorotase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DIHYDROOROT-RXN","Reactome:R-HSA-73571","KEGG_REACTION:R01993"],"synonyms":[{"name":"(S)-dihydroorotate amidohydrolase activity","type":"related"},{"name":"DHOase activity","type":"related"},{"name":"carbamoylaspartic dehydrase activity","type":"related"},{"name":"dihydroorotate hydrolase activity","type":"related"}],"termid":"GO:0004151","terms_by_termid":{"GO:0004151":null}}


id: GO:0102913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(aminomethyl)indole + S-adenosyl-L-methionine = (1H-indol-3-yl)-N-methylmethanamine + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:52268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"3-aminomethylindole N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8686"],"termid":"GO:0102913"}


id: FYPO:0002999
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the medial cortical nodes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to medial cortex during vegetative growth","termid":"FYPO:0002558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to medial cortical node","synonyms":[{"name":"normal protein localisation to medial cortical node","type":"exact"},{"name":"normal protein localization to cortical medial dot","type":"exact"},{"name":"normal protein localization to cytokinetic nodes","type":"related"},{"name":"normal protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"normal protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"normal protein localization to medial cortical nodes","type":"exact"},{"name":"normal protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0002999"}


id: GO:0045465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of the R8 photoreceptor.","definition_xrefs":["PMID:11880339"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R8 cell differentiation","termid":"GO:0045465"}


id: PBO:0012540
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_development_of","termid":"PBO:0012540"}


id: PATO:0002431
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality in which the bearer possesses a gradual, yet distinct, thinning from a wide starting point.","definition_xrefs":["PATOC:WC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waisted","termid":"PATO:0002431"}


id: GO:1904832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of removal of superoxide radicals.","definition_xrefs":["GOC:BHF","GOC:TermGenie","GO_REF:0000058","GOC:BHF_miRNA","PMID:22836756","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular response to oxidative stress","termid":"GO:1900408"},{"relation_name":"is_a","term_name":"negative regulation of response to reactive oxygen species","termid":"GO:1901032"},{"relation_name":"is_a","term_name":"regulation of removal of superoxide radicals","termid":"GO:2000121"},{"relation_name":"is_a","term_name":"negative regulation of reactive oxygen species metabolic process","termid":"GO:2000378"},{"relation_name":"negatively_regulates","term_name":"removal of superoxide radicals","termid":"GO:0019430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"negative regulation of removal of superoxide radicals","synonyms":[{"name":"down regulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"down regulation of removal of O2-","type":"exact"},{"name":"down regulation of removal of oxygen free radicals","type":"exact"},{"name":"down regulation of removal of superoxide radicals","type":"exact"},{"name":"down-regulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"down-regulation of removal of O2-","type":"exact"},{"name":"down-regulation of removal of oxygen free radicals","type":"exact"},{"name":"down-regulation of removal of superoxide radicals","type":"exact"},{"name":"downregulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"downregulation of removal of O2-","type":"exact"},{"name":"downregulation of removal of oxygen free radicals","type":"exact"},{"name":"downregulation of removal of superoxide radicals","type":"exact"},{"name":"inhibition of cellular detoxification of superoxide radicals","type":"narrow"},{"name":"inhibition of removal of O2-","type":"narrow"},{"name":"inhibition of removal of oxygen free radicals","type":"narrow"},{"name":"inhibition of removal of superoxide radicals","type":"narrow"},{"name":"negative regulation of cellular detoxification of superoxide radicals","type":"exact"},{"name":"negative regulation of removal of O2-","type":"exact"},{"name":"negative regulation of removal of oxygen free radicals","type":"exact"}],"termid":"GO:1904832"}


id: GO:1902202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hepatocyte growth factor receptor signaling pathway.","definition_xrefs":["GOC:TermGenie","PMID:18819921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"hepatocyte growth factor receptor signaling pathway","termid":"GO:0048012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of hepatocyte growth factor receptor signaling pathway","synonyms":[{"name":"regulation of HGF receptor signaling pathway","type":"exact"},{"name":"regulation of HGF receptor signalling pathway","type":"exact"},{"name":"regulation of Met signaling pathway","type":"narrow"}],"termid":"GO:1902202"}


id: PBO:0065920
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RABGGTB pseudogene 1","termid":"PBO:0065920"}


id: GO:0031716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a calcitonin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"calcitonin receptor binding","synonyms":[{"name":"calcitonin receptor ligand","type":"narrow"}],"termid":"GO:0031716"}


id: GO:0106069
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SUMO-E3 ligase complex capable of promoting synapsis, the meiotic cell cycle process where side by side pairing and physical juxtaposition of homologous chromosomes is created during meiotic prophase.","definition_xrefs":["PMID:16847351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO ligase complex","termid":"GO:0106068"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"synapsis initiation complex","termid":"GO:0106069"}


id: GO:0140499
data:
  {"annotated_genes":["SJAG_02336","SJAG_02451","SJAG_03126","SJAG_02169","SJAG_03353","SJAG_01679","SJAG_01297","SJAG_04259","SJAG_03681","SJAG_00883"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96208],"is_not":false,"summary":null,"term":"GO:0140499"},{"annotations":[109264,114016,117961,92730,116329,115842,105908,101602,110292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902426"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of negative regulation of mitotic spindle assembly checkpoint signaling.","definition_xrefs":["PMID:28017606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"positive regulation of mitotic metaphase/anaphase transition","termid":"GO:0045842"},{"relation_name":"is_a","term_name":"positive regulation of mitotic sister chromatid segregation","termid":"GO:0062033"},{"relation_name":"is_a","term_name":"negative regulation of spindle checkpoint","termid":"GO:0090233"},{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle spindle assembly checkpoint","termid":"GO:0090266"},{"relation_name":"negatively_regulates","term_name":"mitotic spindle assembly checkpoint signaling","termid":"GO:0007094"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01297":null,"SJAG_01679":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0000070","GO:0007049","GO:0008150","GO:0023052","GO:0044772"],"is_obsolete":false,"name":"negative regulation of mitotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140499","terms_by_termid":{"GO:0140499":null,"GO:1902426":null}}


id: MONDO:1010687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in red fox.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"AA amyloidosis, non-human animal","termid":"MONDO:1010092"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, red fox","secondary_identifiers":["OMIA:000038-9627"],"termid":"MONDO:1010687","xrefs":{"Monarch":{"xref_id":"1010687"}}}


id: PBO:0053786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1037","termid":"PBO:0053786"}


id: MONDO:0008090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hematologic disorder caused by a mutation in the ELANE (ELA2) gene; clinical manifestations include recurrent neutropenia with resultant susceptibility to infection leading to fever.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"constitutional neutropenia","termid":"MONDO:0015134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"cyclic hematopoiesis","secondary_identifiers":["UMLS:C0221023","MEDGEN:65121","ICD9:288.02","NANDO:1200354","GARD:6229","MESH:C536227","DOID:5339","MedDRA:10053176","NCIT:C3820","Orphanet:2686","SCTID:191347008","OMIM:162800","ICD10CM:D70.4","NANDO:2200746"],"synonyms":[{"name":"CH","type":"exact"},{"name":"CN","type":"exact"},{"name":"cyclic agranulocytosis","type":"exact"},{"name":"cyclic hematopoiesis","type":"exact"},{"name":"cyclic neutropenia","type":"related"},{"name":"cyclical neutropenia","type":"exact"},{"name":"dysplasia, myelocytic periodic","type":"exact"},{"name":"neutropenia cyclic","type":"related"},{"name":"neutropenia, cyclic","type":"exact"},{"name":"neutropenia, periodic","type":"exact"},{"name":"periodic neutropenia","type":"exact"}],"termid":"MONDO:0008090","xrefs":{"Monarch":{"xref_id":"0008090"}}}


id: PBO:0004558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acireductone dioxygenase family (predicted)","termid":"PBO:0004558"}


id: GO:0061597
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction GTP = cyclic pyranopterin phosphate + diphosphate.","definition_xrefs":["GOC:dph","PMID:18154309","EC:4.1.99.18"],"gene_count":0,"genotype_count":0,"name":"obsolete cyclic pyranopterin monophosphate synthase activity (obsolete GO:0061597)","termid":"GO:0061597"}


id: MONDO:0016671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic hemoglobinopathy usually characterized by mild microcytic hemolysis and, very rarely, vaso-occlusive complications. Severe manifestations have been reported, including hematuria, splenic infarction, acute chest syndrome, acute episodes of pain and reversible bone marrow necrosis. The genotype is characterized by an HbS allele in combination with an HbE variant (beta26glu>lys); symptoms are due to the low allelic expression of HbE leading to HbS predominance (65+/-5%).","definition_xrefs":["Orphanet:251375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"sickle cell-hemoglobin E disease syndrome","secondary_identifiers":["GARD:20700","UMLS:C1112747","MEDGEN:1669602"],"synonyms":[{"name":"HbSE disease","type":"exact"}],"termid":"MONDO:0016671","xrefs":{"Monarch":{"xref_id":"0016671"}}}


id: SO:0001611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An elongation of a polypeptide sequence at the N terminus deriving from a sequence variant extending the CDS.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"CDS_five_prime_extension","termid":"SO:0002228"},{"relation_name":"is_a","term_name":"elongated_polypeptide","termid":"SO:0001609"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongated_polypeptide_N_terminal","synonyms":[{"name":"elongated polypeptide N terminal","type":"exact"}],"termid":"SO:0001611"}


id: GO:1900616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of emericellamide A.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"emericellamide catabolic process","termid":"GO:1900556"},{"relation_name":"is_a","term_name":"emericellamide A metabolic process","termid":"GO:1900615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629","GO:0019748"],"is_obsolete":false,"name":"emericellamide A catabolic process","synonyms":[{"name":"emericellamide A breakdown","type":"exact"},{"name":"emericellamide A catabolism","type":"exact"},{"name":"emericellamide A degradation","type":"exact"}],"termid":"GO:1900616"}


id: FYPO:0002639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between sister kinetochores is greater than normal before the onset of mitotic anaphase.","definition_xrefs":["PMID:22065639","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"output_of","term_name":"abnormal centromere localization","termid":"FYPO:0001778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased interkinetochore distance before mitotic anaphase","synonyms":[{"name":"increased distance between mitotic kinetochores","type":"related"},{"name":"increased interkinetochore distance before anaphase during mitotic cell cycle","type":"related"},{"name":"increased interkinetochore distance before anaphase onset","type":"exact"},{"name":"increased interkinetochore distance before mitotic anaphase during vegetative growth","type":"exact"},{"name":"increased kinetochore stretching before mitotic anaphase","type":"related"},{"name":"increased sister kinetochore distance before mitotic anaphase","type":"exact"}],"termid":"FYPO:0002639"}


id: GO:0018253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein active site cross-link from the alpha-carboxyl carbon of residue n, an alanine, serine or cysteine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with an oxidation of residue n+1 to form an active aldehyde.","definition_xrefs":["RESID:AA0187","RESID:AA0184","RESID:AA0188"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 5-imidazolinone glycine (obsolete GO:0018253)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 5-imidazolinone glycine","type":"exact"}],"termid":"GO:0018253"}


id: MONDO:0008780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the ALS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile amyotrophic lateral sclerosis","termid":"MONDO:0017593"},{"relation_name":"is_a","term_name":"ALS2-related motor neuron disease","termid":"MONDO:0100227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 2, juvenile","secondary_identifiers":["OMIM:205100","DOID:0060194","GARD:15137","UMLS:C1859807","MEDGEN:349246","MESH:C565957"],"synonyms":[{"name":"ALS, juvenile","type":"related"},{"name":"ALS2","type":"exact"},{"name":"ALS2 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 2","type":"exact"},{"name":"amyotrophic lateral sclerosis 2, juvenile","type":"exact"},{"name":"amyotrophic lateral sclerosis caused by mutation in ALS2","type":"exact"}],"termid":"MONDO:0008780","xrefs":{"Monarch":{"xref_id":"0008780"}}}


id: PBO:0073305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SERPINE1 mRNA binding protein 1 pseudogene 1","termid":"PBO:0073305"}


id: GO:0019798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["PMID:4371784","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-proline dioxygenase activity","termid":"GO:0031543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491","GO:0140096"],"is_obsolete":false,"name":"procollagen-proline dioxygenase activity","termid":"GO:0019798"}


id: PBO:0012219
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium","termid":"PBO:0012219"}


id: GO:1901318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of flagellated sperm motility.","definition_xrefs":["GOC:cilia","GOC:krc","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cilium movement","termid":"GO:0003354"},{"relation_name":"is_a","term_name":"regulation of flagellated sperm motility","termid":"GO:1901317"},{"relation_name":"is_a","term_name":"negative regulation of cilium-dependent cell motility","termid":"GO:1902020"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"flagellated sperm motility","termid":"GO:0030317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flagellated sperm motility","synonyms":[{"name":"down regulation of sperm motility","type":"broad"},{"name":"down regulation of sperm movement","type":"broad"},{"name":"down-regulation of sperm motility","type":"broad"},{"name":"down-regulation of sperm movement","type":"broad"},{"name":"downregulation of sperm motility","type":"broad"},{"name":"downregulation of sperm movement","type":"broad"},{"name":"inhibition of sperm motility","type":"narrow"},{"name":"inhibition of sperm movement","type":"broad"},{"name":"negative regulation of sperm motility","type":"broad"},{"name":"negative regulation of sperm movement","type":"broad"}],"termid":"GO:1901318"}


id: MONDO:1011087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal dysplasia, non-human animal","termid":"MONDO:1010268"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia, dog","secondary_identifiers":["OMIA:001135-9615"],"termid":"MONDO:1011087","xrefs":{"Monarch":{"xref_id":"1011087"}}}


id: MONDO:0011601
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal intrahepatic cholestasis due to citrin deficiency is a mild subtype of citrin deficiency characterized clinically by low birth weight, failure to thrive, transient intrahepatic cholestasis, multiple aminoacidemia, galactosemia, hypoproteinemia, hepatomegaly, decreased coagulation factors, hemolytic anemia, variable but mostly mild liver dysfunction, and hypoglycemia.","definition_xrefs":["Orphanet:247598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"citrin deficiency","termid":"MONDO:0016602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"neonatal intrahepatic cholestasis due to citrin deficiency","secondary_identifiers":["DOID:0070341","MEDGEN:340091","NANDO:1200979","OMIM:605814","GARD:10214","UMLS:C1853942","SCTID:717155003","MESH:C536398"],"synonyms":[{"name":"NICCD","type":"exact"},{"name":"cholestasis, neonatal intrahepatic, caused by citrin deficiency","type":"related"},{"name":"citrullinemia, type II, neonatal-onset","type":"related"},{"name":"citrullinemia, type II, neonatal-onset, with or without failure to thrive and dyslipidaemia","type":"related"},{"name":"citrullinemia, type II, neonatal-onset, with or without failure to thrive and dyslipidemia","type":"related"},{"name":"neonatal intrahepatic cholestasis caused by citrin deficiency","type":"exact"},{"name":"neonatal intrahepatic cholestasis due to citrin deficiency","type":"exact"},{"name":"neonatal-onset citrullinemia type 2","type":"related"},{"name":"neonatal-onset citrullinemia type II","type":"related"}],"termid":"MONDO:0011601","xrefs":{"Monarch":{"xref_id":"0011601"}}}


id: PBO:0044777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX59 antisense RNA 1","termid":"PBO:0044777"}


id: PBO:0079302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 1","termid":"PBO:0079302"}


id: MONDO:1010934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy that occurs in dogs due to a mutation in the SGCD gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, dog","termid":"MONDO:1010911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb-girdle muscular dystrophy, SGCD-related, dog","secondary_identifiers":["OMIA:002122-9615"],"synonyms":[{"name":"muscular dystrophy, limb-girdle, type R6 (LGMDR6), dog","type":"related"}],"termid":"MONDO:1010934","xrefs":{"Monarch":{"xref_id":"1010934"}}}


id: PBO:0056731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MEST intronic transcript 1, antisense RNA","termid":"PBO:0056731"}


id: GO:0015464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an acetylcholine receptor ligand and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"},{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"acetylcholine receptor activity","termid":"GO:0015464"}


id: PBO:0031503
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_actinomycin_D","termid":"PBO:0031503"}


id: PBO:0018085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug147","termid":"PBO:0018085"}


id: MONDO:0010821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial developmental dysphasia is a severe form of developmental verbal apraxia characterized by a deficit in spontaneous speech, writing, grammatical judgment and repetition, defective articulation, moderate to severe degree of dyspraxia, a reduced use of consonant clusters, and comprehension delay. Hearing and intelligence are normal.","definition_xrefs":["Orphanet:1799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"specific language disorder","termid":"MONDO:0016226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial developmental dysphasia","secondary_identifiers":["MEDGEN:374015","GARD:1823","ICD10CM:F80.1","OMIM:600117","SCTID:721220004","UMLS:C1838630","MESH:C563997"],"synonyms":[{"name":"Billard-Toutain-Maheut syndrome","type":"exact"},{"name":"FOXP2-associated dysphasia","type":"exact"},{"name":"developmental dysphasia familial","type":"related"},{"name":"developmental language disorder","type":"related"},{"name":"dysphasia, familial developmental","type":"related"},{"name":"specific language impairment","type":"related"}],"termid":"MONDO:0010821","xrefs":{"Monarch":{"xref_id":"0010821"}}}


id: PBO:0018221
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae TRF4","termid":"PBO:0018221"}


id: PBO:0061535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear speckle splicing regulatory protein 1","termid":"PBO:0061535"}


id: GO:0099616
data:
  {"annotated_genes":["SJAG_00852","SJAG_01249"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102475,105775],"is_not":false,"summary":null,"term":"GO:0099616"}]},"cv_name":"cellular_component","definition":"The component of the matrix side of the mitochondrial inner membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of mitochondrial inner membrane","termid":"GO:0031314"},{"relation_name":"part_of","term_name":"matrix side of mitochondrial inner membrane","termid":"GO:0099617"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00852":null,"SJAG_01249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"extrinsic component of matrix side of mitochondrial inner membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099616","terms_by_termid":{"GO:0099616":null}}


id: MONDO:0032752
data:
  {"annotated_genes":["SJAG_02236"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89136],"is_not":false,"summary":null,"term":"MONDO:0032752"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02236":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0700092"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 75","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16352","OMIM:618437","UMLS:C5193099","DOID:0112211","MEDGEN:1684253"],"synonyms":[{"name":"DEE75","type":"exact"},{"name":"EIEE75","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 75","type":"exact"},{"name":"developmental and epileptic encephalopathy 75","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 75","type":"exact"}],"termid":"MONDO:0032752","terms_by_termid":{"MONDO:0032752":null},"xrefs":{"Monarch":{"xref_id":"0032752"}}}


id: PBO:0060610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap binding subunit 3","termid":"PBO:0060610"}


id: RO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aligned_with","termid":"RO:0002001"}


id: GO:0045978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving nucleosides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleoside metabolic process","termid":"GO:0009118"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"nucleoside metabolic process","termid":"GO:0009116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"negative regulation of nucleoside metabolic process","synonyms":[{"name":"down regulation of nucleoside metabolic process","type":"exact"},{"name":"down-regulation of nucleoside metabolic process","type":"exact"},{"name":"downregulation of nucleoside metabolic process","type":"exact"},{"name":"inhibition of nucleoside metabolic process","type":"narrow"},{"name":"negative regulation of nucleoside metabolism","type":"exact"}],"termid":"GO:0045978"}


id: PBO:0003410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Cki2","termid":"PBO:0003410"}


id: PBO:0040181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate beta-hydroxylase domain containing 2","termid":"PBO:0040181"}


id: MONDO:0030330
data:
  {"annotated_genes":["SJAG_00930"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88319],"is_not":false,"summary":null,"term":"MONDO:0030330"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00930":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0061025","OMIM:619433","UMLS:C5543638","MEDGEN:1780781"],"synonyms":[{"name":"RCM6","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 6","type":"exact"}],"termid":"MONDO:0030330","terms_by_termid":{"MONDO:0030330":null},"xrefs":{"Monarch":{"xref_id":"0030330"}}}


id: PBO:0046271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 10","termid":"PBO:0046271"}


id: MONDO:0032895
data:
  {"annotated_genes":["SJAG_01089","SJAG_02178"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88673,88674],"is_not":false,"summary":null,"term":"MONDO:0032895"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01089":null,"SJAG_02178":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 83","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618744","UMLS:C5231487","DOID:0112218","MEDGEN:1684784"],"synonyms":[{"name":"Barakat-Perenthaler Syndrome","type":"related"},{"name":"DEE83","type":"exact"},{"name":"EIEE83","type":"exact"},{"name":"EPILEPTIC ENCEPHALOPATHY, EARLY INFANTILE, 83","type":"exact"},{"name":"developmental and epileptic encephalopathy 83","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 83","type":"exact"}],"termid":"MONDO:0032895","terms_by_termid":{"MONDO:0032895":null},"xrefs":{"Monarch":{"xref_id":"0032895"}}}


id: FYPO:0007485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which nucleation of spindle microtubules from the new spindle pole body does not occur during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:27889481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis II","termid":"FYPO:0004510"},{"relation_name":"is_a","term_name":"abnormal microtubule nucleation","termid":"FYPO:0007484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000054"],"is_obsolete":false,"name":"abolished meiotic spindle microtubule nucleation from new spindle pole body during meiosis II","synonyms":[{"name":"abolished meiotic spindle microtubule nucleation from new SPB during meiosis II","type":"exact"},{"name":"abolished meiotic spindle microtubule nucleation from new spindle pole body during second meiotic nuclear division","type":"exact"},{"name":"abolished spindle microtubule nucleation from new spindle pole body during meiosis II","type":"exact"}],"termid":"FYPO:0007485"}


id: PBO:0042856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 70","termid":"PBO:0042856"}


id: GO:0051217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of molybdenum into a protein via L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["RESID:AA0375","PDB:1Q16","PMID:12910261"],"gene_count":0,"genotype_count":0,"name":"obsolete molybdenum incorporation via L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide) (obsolete GO:0051217)","termid":"GO:0051217"}


id: PBO:0112922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation wall assembly GPI anchored protein, Meu10","termid":"PBO:0112922"}


id: GO:0170066
data:
  {"annotated_genes":["SJAG_04546"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113228],"is_not":false,"summary":null,"term":"GO:0170066"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of polyamine biosynthesis. Polyamine biosynthesis is the chemical reactions and pathways resulting in the formation of polyamines, any organic compound containing two or more amino groups.","definition_xrefs":["PMID:9769097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of polyamine biosynthetic process","termid":"GO:0010967"},{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"negatively_regulates","term_name":"polyamine biosynthetic process","termid":"GO:0006596"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04546":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of polyamine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0170066","terms_by_termid":{"GO:0170066":null}}


id: FYPO:0002575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein a region in a chromosome that contains one or more long terminal repeats (LTRs) is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromosome at long terminal repeat","synonyms":[{"name":"normal protein localisation to chromosome at long terminal repeat","type":"exact"},{"name":"normal protein localization to LTR","type":"exact"},{"name":"normal protein localization to chromosome at LTR","type":"exact"},{"name":"normal protein localization to chromosome at long terminal repeat during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromosome at long terminal repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0002575"}


id: GO:1904527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of microtubule binding.","definition_xrefs":["GOC:TermGenie","PMID:24520051","GOC:als","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of microtubule binding (obsolete GO:1904527)","synonyms":[{"name":"down regulation of microtubule binding","type":"exact"},{"name":"down regulation of microtubule severing activity","type":"related"},{"name":"down regulation of microtubule/chromatin interaction","type":"related"},{"name":"down-regulation of microtubule binding","type":"exact"},{"name":"down-regulation of microtubule severing activity","type":"related"},{"name":"down-regulation of microtubule/chromatin interaction","type":"related"},{"name":"downregulation of microtubule binding","type":"exact"},{"name":"downregulation of microtubule severing activity","type":"related"},{"name":"downregulation of microtubule/chromatin interaction","type":"related"},{"name":"inhibition of microtubule binding","type":"narrow"},{"name":"inhibition of microtubule severing activity","type":"related"},{"name":"inhibition of microtubule/chromatin interaction","type":"related"},{"name":"negative regulation of microtubule severing activity","type":"related"},{"name":"negative regulation of microtubule/chromatin interaction","type":"related"}],"termid":"GO:1904527"}


id: MONDO:0002369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or borderline cystic epithelial neoplasm arising from the glandular epithelium. The epithelial cells line the cystic spaces which contain serous or mucinous fluid. Representative examples include ovarian and pancreatic cystadenomas.","definition_xrefs":["NCIT:C2972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"cystic neoplasm","termid":"MONDO:0021077"},{"relation_name":"is_a","term_name":"glandular cell neoplasm","termid":"MONDO:0024276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystadenoma","secondary_identifiers":["MESH:D003537","UMLS:C0010633","MEDGEN:8221","ICDO:8440/0","DOID:2634"],"synonyms":[{"name":"cystadenoma","type":"exact"},{"name":"cystadenoma (morphologic abnormality)","type":"exact"},{"name":"cystadenoma, benign","type":"exact"},{"name":"cystoma","type":"exact"}],"termid":"MONDO:0002369","xrefs":{"Monarch":{"xref_id":"0002369"}}}


id: FYPO:0006347
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to mechlorethamine. Cells stop growing (and may die) at a concentration of mechlorethamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to mechlorethamine","synonyms":[{"name":"hypersensitive to mechlorethamine","type":"exact"},{"name":"sensitive to 2-chloro-N-(2-chloroethyl)-N-methylethanamine","type":"exact"},{"name":"sensitive to HN2","type":"exact"},{"name":"sensitive to bis(2-chloroethyl)methylamine","type":"exact"},{"name":"sensitive to mechlorethamine during mitotic cell cycle","type":"related"},{"name":"sensitive to mechlorethamine during vegetative growth","type":"exact"}],"termid":"FYPO:0006347"}


id: PBO:0036145
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_transport_on_microtubule_tip_to_cell_tip_cortex_during_vegetative_growth","termid":"PBO:0036145"}


id: MONDO:0017396
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"toxic dermatosis","secondary_identifiers":["Orphanet:293815","UMLS:C5680999","GARD:21171","MEDGEN:1842825"],"termid":"MONDO:0017396","xrefs":{"Monarch":{"xref_id":"0017396"}}}


id: MONDO:0020744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of intermittent failure of atrial electrical impulse conduction to the ventricles, characterized by a progressively lengthening PR interval prior to the block of an atrial impulse. (CDISC)","definition_xrefs":["NCIT:C62017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"second-degree atrioventricular block","termid":"MONDO:0000467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Mobitz type I atrioventricular block","secondary_identifiers":["MEDGEN:82687","UMLS:C0264907"],"synonyms":[{"name":"AV block second degree Mobitz type I","type":"exact"},{"name":"AV block second degree Möbitz type I","type":"exact"},{"name":"Mobitz I","type":"exact"},{"name":"Mobitz type I","type":"exact"},{"name":"Mobitz type I second degree AV block","type":"exact"},{"name":"Möbitz I","type":"exact"},{"name":"Möbitz type I second degree AV block","type":"exact"},{"name":"Wenckebach block","type":"exact"},{"name":"second degree atrioventricular block Mobitz type I","type":"exact"},{"name":"second degree atrioventricular block Möbitz type I","type":"exact"},{"name":"type 1 2nd degree AV block","type":"exact"},{"name":"type 1 second degree AV block","type":"exact"},{"name":"type 1 second degree atrioventricular block","type":"exact"}],"termid":"MONDO:0020744","xrefs":{"Monarch":{"xref_id":"0020744"}}}


id: MONDO:0017174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Machado-Joseph disease type 1 is a rare, usually severe subtype of Machado-Joseph disease (SCA3/MJD) characterized by the presence of marked pyramidal and extrapyramidal signs.","definition_xrefs":["Orphanet:276238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Machado-Joseph disease","termid":"MONDO:0007182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"Machado-Joseph disease type 1","secondary_identifiers":["GARD:21048","MEDGEN:155610","icd11.foundation:1094680019","UMLS:C0751668","SCTID:91953003"],"synonyms":[{"name":"SCA3, Joseph type","type":"exact"},{"name":"azorean disease, type i","type":"exact"},{"name":"spinocerebellar ataxia type 3, Joseph type","type":"exact"}],"termid":"MONDO:0017174","xrefs":{"Monarch":{"xref_id":"0017174"}}}


id: PBO:0072139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 16","termid":"PBO:0072139"}


id: FYPO:0006874
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell cortex at an old growing cell tip is increased.","definition_xrefs":["PomBase:mah","PMID:17895368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to old growing cell tip","termid":"FYPO:0004362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to cell cortex of old growing cell tip","synonyms":[{"name":"increased protein localisation to cell cortex of old growing cell tip","type":"exact"},{"name":"increased protein localization to cell cortex of old growing cell end","type":"exact"},{"name":"increased protein localization to cell cortex of old growing cell tip during mitotic cell cycle","type":"related"},{"name":"increased protein localization to cell cortex of old growing cell tip during vegetative growth","type":"exact"},{"name":"increased protein localization to old growing cell tip cortex","type":"exact"}],"termid":"FYPO:0006874"}


id: PBO:0048250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 13","termid":"PBO:0048250"}


id: GO:2001303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lipoxin A4. Lipoxin A4 is a C20 hydroxy fatty acid having (5S)-, (6R)- and (15S)-hydroxy groups as well as (7E)- (9E)-, (11Z)- and (13E)-double bonds.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unsaturated fatty acid biosynthetic process","termid":"GO:0006636"},{"relation_name":"is_a","term_name":"long-chain fatty acid biosynthetic process","termid":"GO:0042759"},{"relation_name":"is_a","term_name":"lipoxin biosynthetic process","termid":"GO:2001301"},{"relation_name":"is_a","term_name":"lipoxin A4 metabolic process","termid":"GO:2001302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"lipoxin A4 biosynthetic process","synonyms":[{"name":"LXA4 anabolism","type":"exact"},{"name":"LXA4 biosynthesis","type":"exact"},{"name":"LXA4 biosynthetic process","type":"exact"},{"name":"LXA4 formation","type":"exact"},{"name":"LXA4 synthesis","type":"exact"},{"name":"lipoxin A4 anabolism","type":"exact"},{"name":"lipoxin A4 biosynthesis","type":"exact"},{"name":"lipoxin A4 formation","type":"exact"},{"name":"lipoxin A4 synthesis","type":"exact"}],"termid":"GO:2001303"}


id: PBO:0088958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF866 family protein, human C1orf123 ortholog","termid":"PBO:0088958"}


id: MONDO:0019843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pituitary hormone deficiency secondary to a granulomatous disease (obsolete MONDO:0019843)","secondary_identifiers":["Orphanet:95617"],"termid":"MONDO:0019843","xrefs":{"Monarch":{"xref_id":"0019843"}}}


id: PBO:0084384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity glucose transporter of the major facilitator superfamily; expression is induced by Hxk2p in the presence of glucose and repressed by Rgt1p when glucose is limiting; HXT1 has a paralog, HXT6, what arose from the whole genome duplication","termid":"PBO:0084384"}


id: MONDO:1010329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leber congenital amaurosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leber congenital amaurosis, non-human animal","secondary_identifiers":["OMIA:001222"],"termid":"MONDO:1010329","xrefs":{"Monarch":{"xref_id":"1010329"}}}


id: PATO:0002313
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having or resembling the shape of a telescope.","definition_xrefs":["PATOC:BF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telescopic","termid":"PATO:0002313"}


id: PBO:0089968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe  Mug98 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089968"}


id: GO:0009244
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the core region of bacterial lipopolysaccharides, which contains ten saccharide residues.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"},{"relation_name":"is_a","term_name":"lipopolysaccharide core region metabolic process","termid":"GO:0046401"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"lipopolysaccharide core region biosynthetic process","synonyms":[{"name":"LPS core region biosynthetic process","type":"exact"},{"name":"lipopolysaccharide core region anabolism","type":"exact"},{"name":"lipopolysaccharide core region biosynthesis","type":"exact"},{"name":"lipopolysaccharide core region formation","type":"exact"},{"name":"lipopolysaccharide core region synthesis","type":"exact"}],"termid":"GO:0009244"}


id: PBO:0072956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stearoyl-CoA desaturase pseudogene 1","termid":"PBO:0072956"}


id: PBO:0080953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger BED-type containing 6","termid":"PBO:0080953"}


id: GO:0051333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the reformation of the nuclear membranes during meiosis occurs.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear membrane reassembly","termid":"GO:0031468"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007049","GO:0044085"],"is_obsolete":false,"name":"meiotic nuclear membrane reassembly","synonyms":[{"name":"meiotic nuclear envelope reassembly","type":"related"}],"termid":"GO:0051333"}


id: GO:0050598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + taxa-4(20),11-dien-5alpha-ol = H2O + NADP+ + taxa-4(20),11-dien-5alpha,13alpha-diol.","definition_xrefs":["EC:1.14.14.106","RHEA:18949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"taxane 13-alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.77-RXN","KEGG_REACTION:R06308"],"synonyms":[{"name":"taxa-4(20),11-dien-5alpha-ol,NADPH:oxygen oxidoreductase (13alpha-hydroxylating)","type":"related"},{"name":"taxane 13a-hydroxylase activity","type":"exact"},{"name":"taxane 13alpha-hydroxylase activity","type":"related"}],"termid":"GO:0050598"}


id: FYPO:0003434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ornithine carbamoyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal ornithine carbamoyltransferase activity","termid":"FYPO:0003433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000002","FYPO:0000654","FYPO:0005447"],"is_obsolete":false,"name":"decreased ornithine carbamoyltransferase activity","synonyms":[{"name":"reduced ornithine carbamoyltransferase activity","type":"exact"}],"termid":"FYPO:0003434"}


id: PBO:0062786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit 1","termid":"PBO:0062786"}


id: MOD:00060
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to N-acetyl-L-serine.","definition_xrefs":["PubMed:6997045","RESID:AA0051","PubMed:15350136","PubMed:12175151","PubMed:14730666","PubMed:11857757","PubMed:11999733","PubMed:1880797","PubMed:2106685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated L-serine","termid":"MOD:00647"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-serine","synonyms":[{"name":"(2S)-2-acetamido-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylamino-3-hydroxypropanoic acid","type":"exact"},{"name":"2-acetylazanyl-3-hydroxypropanoic acid","type":"exact"},{"name":"Acetyl","type":"related"},{"name":"MOD_RES N-acetylserine","type":"exact"},{"name":"N-acetyl-L-serine","type":"exact"},{"name":"N-acetylated L-serine","type":"exact"},{"name":"N-acetylserine","type":"exact"},{"name":"NAcSer","type":"exact"}],"termid":"MOD:00060"}


id: PBO:0040058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 4","termid":"PBO:0040058"}


id: PBO:0042979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 5","termid":"PBO:0042979"}


id: PBO:0028980
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_glutathione","termid":"PBO:0028980"}


id: PR:C6Y4C7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C757.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.15","synonyms":[{"name":"Spom972h-cox14","type":"exact"}],"termid":"PR:C6Y4C7"}


id: PBO:0069971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1266, pseudogene","termid":"PBO:0069971"}


id: FYPO:0008231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of lactate dehydrogenase activity is increased.","definition_xrefs":["PMID:37787465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000654","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased lactate dehydrogenase activity","termid":"FYPO:0008231"}


id: PR:O13733
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N-terminal kinase-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01548","PANTHER:PTHR12984:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase domain-containing protein ppk3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15A10.13","secondary_identifiers":["UniProtKB:O13733"],"synonyms":[{"name":"Spom972h-SCYL1","type":"exact"}],"termid":"PR:O13733"}


id: MOD:00543
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:187","PubMed:11698400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(hydroxyphenylglyoxal) arginine","synonyms":[{"name":"2HPG","type":"related"},{"name":"bis(hydroxphenylglyoxal) arginine","type":"related"}],"termid":"MOD:00543"}


id: GO:0106045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of methylglyoxal from a glycated guanine, to form lactate and a deglycated guanine.","definition_xrefs":["PMID:28596309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylglyoxal metabolic process","termid":"GO:0009438"},{"relation_name":"is_a","term_name":"guanine deglycation","termid":"GO:0106044"},{"relation_name":"is_a","term_name":"cellular detoxification of methylglyoxal","termid":"GO:0140041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"guanine deglycation, methylglyoxal removal","termid":"GO:0106045"}


id: GO:0034222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving chitin in a cell wall.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell wall chitin metabolic process (obsolete GO:0034222)","synonyms":[{"name":"regulation of cell wall chitin metabolism","type":"exact"}],"termid":"GO:0034222"}


id: PBO:0000736
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin family","termid":"PBO:0000736"}


id: PBO:0069885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1174, pseudogene","termid":"PBO:0069885"}


id: PBO:0117099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS1 antisense RNA 1","termid":"PBO:0117099"}


id: PBO:0027941
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_upon_glucose_starvation","termid":"PBO:0027941"}


id: PBO:0082234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; weak, but broad substrate specificity for alpha-1,4- and alpha-1,6-glucosides; member of IMA isomaltase family; not required for isomaltose utilization, but Ima4p overexpression allows the ima1 null mutant to grow on isomaltose; identical to IMA3","termid":"PBO:0082234"}


id: PBO:0042417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 1","termid":"PBO:0042417"}


id: PBO:0113066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Swr1p complex that incorporates Htz1p into chromatin; component of the NuA4 histone acetyltransferase complex; associates with and protects nucleosome-free regions of the genome including rDNA, tDNA and telomeric loci, contributing to genome integrity","termid":"PBO:0113066"}


id: PBO:0074193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 3","termid":"PBO:0074193"}


id: FYPO:0003621
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which posttranscriptional addition of a methyl group to the 2'-oxygen atom of a nucleotide residue in an U6 snRNA molecule is abolished.","definition_xrefs":["PomBase:mah","GO:1990438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished RNA modification","termid":"FYPO:0000371"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"},{"relation_name":"is_a","term_name":"abnormal snRNA modification","termid":"FYPO:0008111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320","FYPO:0000294"],"is_obsolete":false,"name":"abolished U6 2'-O-snRNA methylation","synonyms":[{"name":"U6 2'-O-snRNA methylation abolished","type":"exact"},{"name":"U6 2'-O-snRNA methylation abolished during vegetative growth","type":"exact"},{"name":"abolished U6 2'-O-snRNA methylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003621"}


id: PBO:0033746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_punctate_nuclear_protein_localization_during_cellular_response_to_ionizing_radiation","termid":"PBO:0033746"}


id: GO:0140927
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of cyclic-di-GMP from one side of a membrane to the other.","definition_xrefs":["PMID:34965418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cyclic-di-GMP transmembrane transporter activity","termid":"GO:0140927"}


id: MONDO:0022815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital absence of the sternocleidomastoid muscle","secondary_identifiers":["UMLS:C2931075","MESH:C535977","MEDGEN:419327"],"termid":"MONDO:0022815","xrefs":{"Monarch":{"xref_id":"0022815"}}}


id: PBO:0040879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 4","termid":"PBO:0040879"}


id: GO:0071097
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaV-beta3 integrin complex bound to paxillin and the FAK-related kinase Pyk2.","definition_xrefs":["PMID:11683411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"alphaV-beta3 integrin-paxillin-Pyk2 complex","synonyms":[{"name":"ITGAV-ITGB3-PXN-PTK2b complex","type":"narrow"}],"termid":"GO:0071097"}


id: MONDO:0009895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postaxial polydactyly-dental and vertebral anomalies syndrome is a rare, genetic, developmental defect during embryogenesis syndrome characterized by postaxial polydactyly and other abnormalities of the hands and feet (e.g. brachydactyly, broad toes), hypoplasia and fusion of the vertebral bodies, as well as dental abnormalities (fused teeth, macrodontia, hypodontia, short roots). There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:2916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial polydactyly-dental and vertebral anomalies syndrome","secondary_identifiers":["UMLS:C1849732","GARD:16614","MEDGEN:342342","MESH:C564880","OMIM:263540"],"synonyms":[{"name":"polydactyly, postaxial, with dental and vertebral anomalies","type":"related"}],"termid":"MONDO:0009895","xrefs":{"Monarch":{"xref_id":"0009895"}}}


id: PBO:0036387
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Rhodotorula minuta DPS1","termid":"PBO:0036387"}


id: PBO:0017912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspan protein implicated in mating Dni2 (predicted)","termid":"PBO:0017912"}


id: PBO:0088677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"class I glutamine amidotransferase family protein, conserved in fungi, bacteria, plants","termid":"PBO:0088677"}


id: GO:0031221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving arabinan, a polysaccharide composed of arabinose residues.","definition_xrefs":["GOC:mlg","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide metabolic process","termid":"GO:0005976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"arabinan metabolic process","synonyms":[{"name":"arabinan metabolism","type":"exact"}],"termid":"GO:0031221"}


id: PBO:0048764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GMDS divergent transcript","termid":"PBO:0048764"}


id: GO:2000391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil extravasation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular extravasation","termid":"GO:0002693"},{"relation_name":"is_a","term_name":"positive regulation of neutrophil migration","termid":"GO:1902624"},{"relation_name":"is_a","term_name":"regulation of neutrophil extravasation","termid":"GO:2000389"},{"relation_name":"positively_regulates","term_name":"neutrophil extravasation","termid":"GO:0072672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil extravasation","termid":"GO:2000391"}


id: PBO:0001613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf21","termid":"PBO:0001613"}


id: MONDO:0012278
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive supranuclear palsy","termid":"MONDO:0019037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"supranuclear palsy, progressive, 2","secondary_identifiers":["OMIM:609454","UMLS:C1836148","MEDGEN:324446","MESH:C563717","GARD:18344"],"synonyms":[{"name":"PSNP2","type":"exact"},{"name":"supranuclear palsy, progressive, 2","type":"exact"}],"termid":"MONDO:0012278","xrefs":{"Monarch":{"xref_id":"0012278"}}}


id: PBO:0076968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB induced factor homeobox 2 like Y-linked","termid":"PBO:0076968"}


id: PBO:0091750
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"II:g.1960392_1960393insG","termid":"PBO:0091750"}


id: PBO:0077639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin related transmembrane protein 3","termid":"PBO:0077639"}


id: MONDO:0958264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleritis","termid":"MONDO:0001718"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"infectious scleritis","secondary_identifiers":["Orphanet:648665","MEDGEN:1853163","UMLS:C5816746"],"termid":"MONDO:0958264","xrefs":{"Monarch":{"xref_id":"0958264"}}}


id: PBO:0041512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 180","termid":"PBO:0041512"}


id: GO:0006428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling isoleucine to isoleucyl-tRNA, catalyzed by isoleucyl-tRNA synthetase. The isoleucyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a isoleucine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"isoleucyl-tRNA aminoacylation","termid":"GO:0006428"}


id: PBO:0063880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class H pseudogene 1","termid":"PBO:0063880"}


id: PBO:0077330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 67","termid":"PBO:0077330"}


id: PBO:0087977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 3'-end processing endonuclease tRNase Z; also localized to mitochondria and interacts genetically with Rex2 exonuclease; homolog of the human candidate prostate cancer susceptibility gene ELAC2","termid":"PBO:0087977"}


id: GO:0070505
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A layer of extracellular matrix deposited onto the surface of the pollen wall upon disintegration of the tapetal layer of the anther wall in the late stages of pollen development. The composition of this material is highly heterogeneous and includes waxes, lipid droplets, small aromatic molecules, and proteins. The pollen coat is proposed to have many functions, such as holding pollen in the anther until dispersal, facilitation of pollen dispersal, protection of pollen from water loss and UV radiation, and facilitation of adhesion of pollen to the stigma.","definition_xrefs":["GOC:mah","PMID:15012271","GOC:rph","PMID:28955324","PMID:12930826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specialized extracellular matrix","termid":"GO:0140047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pollen coat","synonyms":[{"name":"pollenkitt","type":"exact"},{"name":"tryphine","type":"exact"}],"termid":"GO:0070505"}


id: MONDO:0020381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A macular degeneration characterized by abnormal accumulation of lipofuscin in the retinal pigment epithelium in a distinct pattern, patterns include; reticular ('fishnet-like'), macroreticular ('spider-shaped'), and butterfly-shaped.","definition_xrefs":["DOID:0060863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macular degeneration","termid":"MONDO:0003004"},{"relation_name":"is_a","term_name":"patterned dystrophy of the retinal pigment epithelium","termid":"MONDO:0018973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"patterned macular dystrophy","secondary_identifiers":["SCTID:725590001","ICD10CM:H35.5","OMIMPS:169150"],"synonyms":[{"name":"macular dystrophy, patterned","type":"exact"},{"name":"patterned dystrophy of retinal pigment epithelium","type":"exact"}],"termid":"MONDO:0020381","xrefs":{"Monarch":{"xref_id":"0020381"}}}


id: PBO:0002038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Apc5","termid":"PBO:0002038"}


id: PBO:0048538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gem nuclear organelle associated protein 8 pseudogene 4","termid":"PBO:0048538"}


id: PBO:0053573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 593","termid":"PBO:0053573"}


id: PBO:0062036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 5","termid":"PBO:0062036"}


id: FYPO:0004482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuole fusion, the merging of two vacuole membranes to form a single vacuole, is abnormal.","definition_xrefs":["GO:0042144","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuole organization during vegetative growth","termid":"FYPO:0000812"},{"relation_name":"is_a","term_name":"abnormal vacuole fusion","termid":"FYPO:0006057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal vacuole fusion during vegetative growth","synonyms":[{"name":"abnormal homotypic vacuole fusion during vegetative growth","type":"exact"},{"name":"abnormal vacuole fusion during mitotic cell cycle","type":"related"},{"name":"abnormal vacuole fusion, non-autophagic, during vegetative growth","type":"exact"}],"termid":"FYPO:0004482"}


id: PBO:0038834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 7","termid":"PBO:0038834"}


id: MONDO:0018173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute opioid poisoning is a rare intoxication with opioids, a large group of alkaloid analgesics, mainly characterized by miosis (pinpoint pupil), respiratory depression (bradypnea/apnea) and central nervous system depression (sedation or coma). Other manifestations include hypotension, reduced bowel motility, hypothermia and hypoglycemia. Naloxone, a competitive inhibitor of the mu-opioid receptor, is a potent antagonist and is used as the antidote for opioid intoxication.","definition_xrefs":["Orphanet:35889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"},{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute opioid poisoning","secondary_identifiers":["icd11.foundation:1395283456"],"termid":"MONDO:0018173","xrefs":{"Monarch":{"xref_id":"0018173"}}}


id: GO:0002635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of germinal center formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of germinal center formation","termid":"GO:0002634"},{"relation_name":"is_a","term_name":"negative regulation of adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002823"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"germinal center formation","termid":"GO:0002467"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of germinal center formation","synonyms":[{"name":"down regulation of germinal center formation","type":"exact"},{"name":"down-regulation of germinal center formation","type":"exact"},{"name":"downregulation of germinal center formation","type":"exact"},{"name":"inhibition of germinal center formation","type":"narrow"}],"termid":"GO:0002635"}


id: PBO:0078274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Cys (anticodon GCA) 9-2","termid":"PBO:0078274"}


id: PBO:0049959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 5","termid":"PBO:0049959"}


id: PBO:0002232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endocytosis regulator (predicted)","termid":"PBO:0002232"}


id: MONDO:0030866
data:
  {"annotated_genes":["SJAG_03914","SJAG_01766"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87679,87680],"is_not":false,"summary":null,"term":"MONDO:0030866"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01766":null,"SJAG_03914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with cardiomyopathy, spasticity, and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436848","MEDGEN:1750805","OMIM:619121","DOID:0070543"],"synonyms":[{"name":"NEDCASB","type":"exact"}],"termid":"MONDO:0030866","terms_by_termid":{"MONDO:0030866":null},"xrefs":{"Monarch":{"xref_id":"0030866"}}}


id: MONDO:0060764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetraamelia-multiple malformations syndrome","termid":"MONDO:0010110"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tetraamelia syndrome 1","secondary_identifiers":["MEDGEN:860705","UMLS:C4012268","DOID:0112192","GARD:15238","OMIM:273395"],"synonyms":[{"name":"TETAMS1","type":"related"},{"name":"Tetra-amelia syndrome 1","type":"exact"},{"name":"tetraamelia syndrome 1","type":"exact"},{"name":"tetraamelia syndrome, autosomal recessive","type":"related"}],"termid":"MONDO:0060764","xrefs":{"Monarch":{"xref_id":"0060764"}}}


id: GO:0140255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to phosphate starvation.","definition_xrefs":["PMID:29414789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to nutrient levels","termid":"GO:0032107"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"regulates","term_name":"cellular response to phosphate starvation","termid":"GO:0016036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to phosphate starvation","termid":"GO:0140255"}


id: SO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A repeat region found within the modular centromere.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"repeat_region","termid":"SO:0000657"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromeric_repeat","synonyms":[{"name":"INSDC_feature:repeat_region","type":"broad"},{"name":"INSDC_qualifier:centromeric_repeat","type":"exact"},{"name":"centromeric repeat","type":"exact"}],"termid":"SO:0001797"}


id: GO:0033245
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving any antibiotic that contains the condensed beta-lactamthiazolidine ring system.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of penicillin metabolic process","termid":"GO:0033244"},{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"negatively_regulates","term_name":"penicillin metabolic process","termid":"GO:0042316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"negative regulation of penicillin metabolic process","synonyms":[{"name":"negative regulation of penicillin metabolism","type":"exact"}],"termid":"GO:0033245"}


id: MONDO:0019831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital anomaly of the coronary sinus (obsolete MONDO:0019831)","secondary_identifiers":["Orphanet:95500"],"termid":"MONDO:0019831","xrefs":{"Monarch":{"xref_id":"0019831"}}}


id: PBO:0043436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"connector enhancer of kinase suppressor of Ras 2","termid":"PBO:0043436"}


id: MONDO:0000966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign circumscribed tumor characterized by small spindle cells, rounded hyperchromatic cells and multinucleated giant cells with radially arranged nuclei.","definition_xrefs":["NCIT:C3703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoma","termid":"MONDO:0005106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic lipoma","secondary_identifiers":["DOID:10192","SCTID:404059000","MEDGEN:60027","ICDO:8854/0","UMLS:C0205823"],"synonyms":[{"name":"pleomorphic lipoma","type":"exact"},{"name":"pleomorphic lipoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0000966","xrefs":{"Monarch":{"xref_id":"0000966"}}}


id: PR:Q8WZK3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ibp1 gene.","definition_xrefs":["UniProtKB:Q8WZK3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase ibp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.07","synonyms":[{"name":"Itsy bitsy phosphatase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ibp1","type":"exact"},{"name":"cdc25-like phosphatase ibp1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q8WZK3"}


id: PBO:0050679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 6","termid":"PBO:0050679"}


id: MONDO:0032776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 99","secondary_identifiers":["DOID:0111634","MEDGEN:1678930","OMIM:618481","GARD:22663","UMLS:C4760579"],"synonyms":[{"name":"DFNB99","type":"narrow"},{"name":"deafness, autosomal recessive 99","type":"narrow"}],"termid":"MONDO:0032776","xrefs":{"Monarch":{"xref_id":"0032776"}}}


id: PBO:0083575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps with verified gene GPR1/YDL035C; YDL034W is not an essential gene","termid":"PBO:0083575"}


id: GO:1901466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferulate catabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"ferulate catabolic process","termid":"GO:1901067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of ferulate catabolic process","synonyms":[{"name":"regulation of ferulate breakdown","type":"exact"},{"name":"regulation of ferulate catabolism","type":"exact"},{"name":"regulation of ferulate degradation","type":"exact"}],"termid":"GO:1901466"}


id: PATO:0002011
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality which is held by a bearer when the latter's disposition the presence of abnormally proliferating masses of cells.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplastic","synonyms":[{"name":"tumorous","type":"exact"}],"termid":"PATO:0002011"}


id: PBO:0031481
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_pigment_accumulation","termid":"PBO:0031481"}


id: PBO:0089701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein translocation subcomplex subunit Sec62","termid":"PBO:0089701"}


id: PR:O94662
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC651.04 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C651.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.04","synonyms":[{"name":"Spom972h-SPBC651.04","type":"exact"}],"termid":"PR:O94662"}


id: GO:1901065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of syringal lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin catabolic process","termid":"GO:0046274"},{"relation_name":"is_a","term_name":"syringal lignin metabolic process","termid":"GO:1901064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"syringal lignin catabolic process","synonyms":[{"name":"S-lignin catabolic process","type":"exact"},{"name":"syringal lignin breakdown","type":"exact"},{"name":"syringal lignin catabolism","type":"exact"},{"name":"syringal lignin degradation","type":"exact"}],"termid":"GO:1901065"}


id: MONDO:0009299
data:
  {"annotated_genes":["SJAG_04148","SJAG_03051","SJAG_04950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030736"},{"annotations":[87615],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013689"},{"annotations":[88378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054850"}]},"cv_name":"mondo","definition":"46,XX gonadal dysgenesis (46,XX GD) is a primary ovarian defect leading to premature ovarian failure (POF) in otherwise normal 46,XX females as a result of failure of the gonads to develop or due to resistance to gonadotrophin stimulation.","definition_xrefs":["Orphanet:243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonadal dysgenesis","termid":"MONDO:0001967"},{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03051":null,"SJAG_04148":null,"SJAG_04950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"46 XX gonadal dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:5671","OMIMPS:233300","MESH:D023961","icd11.foundation:1742528605","NANDO:2200384","MEDGEN:146899","UMLS:C0685837","DOID:14450","NCIT:C120197","SCTID:95198001"],"synonyms":[{"name":"46,XX complete gonadal dysgenesis","type":"exact"},{"name":"46,XX gonadal dysgenesis","type":"exact"},{"name":"46,XX ovarian dysgenesis","type":"exact"},{"name":"46,XX pure gonadal dysgenesis","type":"exact"},{"name":"FSH-RO","type":"exact"},{"name":"XX female gonadal dysgenesis","type":"exact"},{"name":"XX gonadal dysgenesis","type":"related"},{"name":"XX-GD","type":"exact"},{"name":"follicular stimulating hormone-resistant ovaries","type":"exact"},{"name":"hypergonadotropic ovarian dysgenesis","type":"exact"},{"name":"ovarian dysgenesis","type":"related"}],"termid":"MONDO:0009299","terms_by_termid":{"MONDO:0013689":null,"MONDO:0030736":null,"MONDO:0054850":null},"xrefs":{"Monarch":{"xref_id":"0009299"}}}


id: GO:0160251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycogen, a polydisperse, highly branched glucan composed of chains of D-glucose residues, occurring through dextrin derivative intermediates.","definition_xrefs":["MetaCyc:PWY-5941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen catabolic process","termid":"GO:0005980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"glycogen catabolic process via dextrin","termid":"GO:0160251"}


id: MONDO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian cancer (obsolete MONDO:0002288)","termid":"MONDO:0002288","xrefs":{"Monarch":{"xref_id":"0002288"}}}


id: GO:0110082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly.","definition_xrefs":["PMID:29343550","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell division site","termid":"GO:1901900"},{"relation_name":"regulates","term_name":"protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:1903476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to cell division site involved in mitotic actomyosin contractile ring assembly","termid":"GO:0110082"}


id: GO:0071528
data:
  {"annotated_genes":["SJAG_02661"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81488],"is_not":false,"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement from the nucleus to the cytoplasm of a tRNA that was previously exported to the cytoplasm and then imported back into the nucleus. The processes of primary tRNA export and secondary export (re-export) can be distinguished because in organisms in which tRNA splicing occurs in the cytoplasm, the export of a mature tRNA must occur by re-export.","definition_xrefs":["GOC:mcc","PMID:17475781","PMID:20032305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA export from nucleus","termid":"GO:0006409"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02661":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006913","GO:0051179"],"is_obsolete":false,"name":"tRNA re-export from nucleus","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"tRNA reexport from nucleus","type":"exact"}],"termid":"GO:0071528","terms_by_termid":{"GO:0071528":null}}


id: MONDO:0957821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 88","secondary_identifiers":["DOID:0070587","MEDGEN:1845113","OMIM:620547","UMLS:C5882706"],"termid":"MONDO:0957821","xrefs":{"Monarch":{"xref_id":"0957821"}}}


id: PBO:0069483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 750, pseudogene","termid":"PBO:0069483"}


id: PBO:0048428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine amidinotransferase","termid":"PBO:0048428"}


id: GO:0031223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The behavior of an organism in response to a sound.","definition_xrefs":["GOC:pr","GOC:rc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mechanosensory behavior","termid":"GO:0007638"},{"relation_name":"part_of","term_name":"response to auditory stimulus","termid":"GO:0010996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory behavior","synonyms":[{"name":"auditory behaviour","type":"exact"},{"name":"behavioral response to sound","type":"exact"},{"name":"behavioural response to sound","type":"exact"}],"termid":"GO:0031223"}


id: GO:0097163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Covalently binding to sulfur and delivering it to an acceptor molecule.","definition_xrefs":["PMID:16387657","GOC:imk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular carrier activity","termid":"GO:0140104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140104","GO:0003674"],"is_obsolete":false,"name":"sulfur carrier activity","termid":"GO:0097163"}


id: GO:0102132
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADP + a 3R-hydroxypimeloyl-[acp] methyl ester = NADPH + H+ + a 3-oxo-pimeloyl-[acp] methyl ester.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-oxo-pimeloyl-[acp] methyl ester reductase activity (obsolete GO:0102132)","termid":"GO:0102132"}


id: PBO:0062166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 7 pseudogene","termid":"PBO:0062166"}


id: CHEBI:8273
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plumbagin","termid":"CHEBI:8273"}


id: PBO:0028205
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_synthesis","termid":"PBO:0028205"}


id: GO:0034274
data:
  {"annotated_genes":["SJAG_06309"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74034],"is_not":false,"summary":null,"term":"GO:0034274"}]},"cv_name":"cellular_component","definition":"A protein complex required for the expansion of the autophagosomal membrane. In budding yeast, this complex consists of Atg12p, Atg5p and Atg16p.","definition_xrefs":["PMID:17986448","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Atg12-Atg5-Atg16 complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0034274","terms_by_termid":{"GO:0034274":null}}


id: MOD:00021
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-lysine.","definition_xrefs":["RESID:AA0012","ChEBI:29967","PubMed:3106962","PubMed:6120171","PubMed:6692818","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 128.0-128.1","termid":"MOD:00893"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue","termid":"MOD:01441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine residue","synonyms":[{"name":"(2S)-2,6-diaminohexanoic acid","type":"exact"},{"name":"2,6-bis(azanyl)hexanoic acid","type":"exact"},{"name":"6-amino-L-norleucine","type":"exact"},{"name":"ACT_SITE Schiff-base intermediate with substrate","type":"exact"},{"name":"L-lysine","type":"exact"},{"name":"Lys","type":"exact"},{"name":"alpha,epsilon-diaminocaproic acid","type":"exact"}],"termid":"MOD:00021"}


id: PBO:0077138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tight junction associated protein 1","termid":"PBO:0077138"}


id: MONDO:0018237
data:
  {"annotated_genes":["SJAG_03144","SJAG_00414","SJAG_00504","SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014651"},{"annotations":[87950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012516"},{"annotations":[87156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007943"},{"annotations":[87381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009903"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00414":null,"SJAG_00504":null,"SJAG_03144":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21574","DOID:0060379","MEDGEN:272278","Orphanet:364574","UMLS:C1332140","icd11.foundation:1702160042","NCIT:C35795"],"termid":"MONDO:0018237","terms_by_termid":{"MONDO:0007943":null,"MONDO:0009903":null,"MONDO:0012516":null,"MONDO:0014651":null},"xrefs":{"Monarch":{"xref_id":"0018237"}}}


id: MONDO:1011746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial eczema, non-human animal","secondary_identifiers":["OMIA:001276"],"termid":"MONDO:1011746","xrefs":{"Monarch":{"xref_id":"1011746"}}}


id: PBO:0061624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 8","termid":"PBO:0061624"}


id: GO:0044878
data:
  {"annotated_genes":["SJAG_03073","SJAG_02266","SJAG_04597","SJAG_04280","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92005,96418,102558,103460,118064],"is_not":false,"summary":null,"term":"GO:0044878"}]},"cv_name":"biological_process","definition":"A signaling process that contributes to a mitotic cell cycle checkpoint that detects a defect in cytokinesis and prevents further rounds of nuclear division until cytokinesis is completed.","definition_xrefs":["GOC:jl","PMID:17538026","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of G2/M transition of mitotic cell cycle","termid":"GO:0010972"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_02266":null,"SJAG_03073":null,"SJAG_04280":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052","GO:0044772"],"is_obsolete":false,"name":"mitotic cytokinesis checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1903820"],"synonyms":[{"name":"cytokinesis after mitosis checkpoint","type":"related"},{"name":"defective cytokinesis checkpoint","type":"related"},{"name":"mitotic cytokinesis checkpoint","type":"exact"},{"name":"signal transduction involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signaling pathway involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signalling cascade involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"signalling pathway involved in mitotic cytokinesis checkpoint","type":"related"}],"termid":"GO:0044878","terms_by_termid":{"GO:0044878":null}}


id: PBO:0065415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit beta 3 pseudogene 1","termid":"PBO:0065415"}


id: FYPO:0006518
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after entering G0 phase.","definition_xrefs":["PMID:29167439","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nitrogen starvation","termid":"FYPO:0001178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"loss of viability in G0","synonyms":[{"name":"loss of viability in cell quiescence","type":"exact"},{"name":"loss of viability in quiescence","type":"exact"}],"termid":"FYPO:0006518"}


id: PBO:0047162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 187 member B","termid":"PBO:0047162"}


id: MONDO:0022691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebello-olivary atrophy","synonyms":[{"name":"Cerebelloolivary atrophy","type":"related"}],"termid":"MONDO:0022691","xrefs":{"Monarch":{"xref_id":"0022691"}}}


id: PBO:0074702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 71B","termid":"PBO:0074702"}


id: PBO:0043123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium and integrin binding 1","termid":"PBO:0043123"}


id: PBO:0035840
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein-protein_interaction_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0035840"}


id: PBO:0056616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTOR associated protein, eak-7 homolog","termid":"PBO:0056616"}


id: PBO:0069291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 547, pseudogene","termid":"PBO:0069291"}


id: PBO:0077687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF superfamily member 18","termid":"PBO:0077687"}


id: PBO:0110371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABRA6 antisense RNA 1","termid":"PBO:0110371"}


id: PBO:0117138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA guanosine 2 -O-methyltransferase TARBP1","termid":"PBO:0117138"}


id: GO:0030160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that provides a physical support bridging a synaptic signaling receptor and a downstream signaling molecule.","definition_xrefs":["PMID:10506216"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor complex adaptor activity","termid":"GO:0030159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"synaptic receptor adaptor activity","synonyms":[{"name":"GKAP/Homer scaffold activity","type":"narrow"},{"name":"GKAP/Homer scaffold protein","type":"narrow"},{"name":"postsynaptic density scaffold protein","type":"narrow"}],"termid":"GO:0030160"}


id: MONDO:1011878
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ataxic neuropathy, non-human animal","secondary_identifiers":["OMIA:001467"],"termid":"MONDO:1011878","xrefs":{"Monarch":{"xref_id":"1011878"}}}


id: MOD:01088
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a 2,4,6-trimethyloxybenzyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2,4,6-trimethyloxybenzyl modified residue","synonyms":[{"name":"Tmob","type":"exact"}],"termid":"MOD:01088"}


id: GO:0008790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose = D-ribulose.","definition_xrefs":["EC:5.3.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"arabinose isomerase activity","secondary_identifiers":["RHEA:13849","MetaCyc:DARABISOM-RXN"],"synonyms":[{"name":"D-arabinose aldose-ketose-isomerase activity","type":"related"},{"name":"D-arabinose isomerase activity","type":"narrow"},{"name":"D-arabinose ketol-isomerase activity","type":"related"},{"name":"D-arabinose(L-fucose) isomerase activity","type":"related"}],"termid":"GO:0008790"}


id: MONDO:0004598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of acute right heart failure produced by a sudden increase in resistance to blood flow in the pulmonary circulation.","definition_xrefs":["PMID:19186411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cor pulmonale","termid":"MONDO:0004596"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute cor pulmonale","secondary_identifiers":["ICD9:415","DOID:8517","ICD9:415.0","SCTID:49584005","SCTID:67189007","DOID:8514","UMLS:C0155671","MEDGEN:510041"],"synonyms":[{"name":"acute pulmonary heart disease","type":"exact"},{"name":"cor pulmonale, acute","type":"exact"}],"termid":"MONDO:0004598","xrefs":{"Monarch":{"xref_id":"0004598"}}}


id: GO:0072328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alkene, any acyclic branched or unbranched hydrocarbon having one carbon-carbon double bond and the general formula CnH2n.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alkene binding","termid":"GO:0072328"}


id: PBO:0053040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP1B pseudogene 1","termid":"PBO:0053040"}


id: GO:1901644
data:
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id: MONDO:0024548
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id: GO:0000401
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id: GO:0052407
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id: FYPO:0001414
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id: MONDO:0020198
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare conjunctival disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare conjunctival disease (obsolete MONDO:0020198)","secondary_identifiers":["Orphanet:98610"],"synonyms":[{"name":"rare conjunctival disease","type":"exact"}],"termid":"MONDO:0020198","xrefs":{"Monarch":{"xref_id":"0020198"}}}


id: GO:1905475
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id: GO:0071674
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id: PBO:0012835
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id: GO:0015730
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id: PBO:0039235
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id: MONDO:0015286
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disorder of glycosylation (CDG) is a fast growing group of inborn errors of metabolism characterized by defective activity of enzymes that participate in glycosylation (modification of proteins and other macromolecules by adding and processing of oligosaccharide side chains). CDG is comprised of phenotypically diverse disorders affecting multiple systems including the central nervous system, muscle function, immunity, endocrine system, and coagulation. The numerous entities in this group are subdivided, based on the synthetic pathway affected, into disorder of protein N-glycosylation, disorder of protein O-glycosylation, disorder of multiple glycosylation, and disorder of glycosphingolipid and glycosylphosphatidylinositol anchor glycosylation.","definition_xrefs":["Orphanet:137"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"disorder of glycosylation","termid":"MONDO:0024322"}],"gene_count":71,"genes_by_uniquename":{"SJAG_00041":null,"SJAG_00068":null,"SJAG_00183":null,"SJAG_00295":null,"SJAG_00334":null,"SJAG_00339":null,"SJAG_00437":null,"SJAG_00554":null,"SJAG_00578":null,"SJAG_00747":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00924":null,"SJAG_00964":null,"SJAG_00978":null,"SJAG_01069":null,"SJAG_01071":null,"SJAG_01209":null,"SJAG_01416":null,"SJAG_01459":null,"SJAG_01491":null,"SJAG_01940":null,"SJAG_01950":null,"SJAG_01960":null,"SJAG_02102":null,"SJAG_02163":null,"SJAG_02211":null,"SJAG_02523":null,"SJAG_02539":null,"SJAG_02648":null,"SJAG_02783":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03054":null,"SJAG_03056":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03153":null,"SJAG_03158":null,"SJAG_03188":null,"SJAG_03292":null,"SJAG_03311":null,"SJAG_03333":null,"SJAG_03506":null,"SJAG_03552":null,"SJAG_03656":null,"SJAG_03672":null,"SJAG_03723":null,"SJAG_03774":null,"SJAG_03865":null,"SJAG_04053":null,"SJAG_04096":null,"SJAG_04119":null,"SJAG_04127":null,"SJAG_04165":null,"SJAG_04231":null,"SJAG_04316":null,"SJAG_04363":null,"SJAG_04697":null,"SJAG_04728":null,"SJAG_04821":null,"SJAG_04881":null,"SJAG_04952":null,"SJAG_04954":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06514":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10307","SCTID:238049009","MEDGEN:76469","UMLS:C0282577","MESH:D018981","ICD9:271.8","NCIT:C84615","DOID:5212"],"synonyms":[{"name":"CDG","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndromes","type":"related"},{"name":"congenital disorder of glycosylation","type":"exact"},{"name":"congenital disorders of glycosylation","type":"related"}],"termid":"MONDO:0015286","terms_by_termid":{"MONDO:0008907":null,"MONDO:0009134":null,"MONDO:0009364":null,"MONDO:0009398":null,"MONDO:0009890":null,"MONDO:0009953":null,"MONDO:0010013":null,"MONDO:0010075":null,"MONDO:0010221":null,"MONDO:0010466":null,"MONDO:0010472":null,"MONDO:0010478":null,"MONDO:0010998":null,"MONDO:0011257":null,"MONDO:0011291":null,"MONDO:0011629":null,"MONDO:0011783":null,"MONDO:0011933":null,"MONDO:0011964":null,"MONDO:0011969":null,"MONDO:0012052":null,"MONDO:0012117":null,"MONDO:0012123":null,"MONDO:0012248":null,"MONDO:0012282":null,"MONDO:0012465":null,"MONDO:0012518":null,"MONDO:0012556":null,"MONDO:0012635":null,"MONDO:0012637":null,"MONDO:0012783":null,"MONDO:0012885":null,"MONDO:0013049":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0013281":null,"MONDO:0013325":null,"MONDO:0013349":null,"MONDO:0013468":null,"MONDO:0013563":null,"MONDO:0013789":null,"MONDO:0013810":null,"MONDO:0013870":null,"MONDO:0013882":null,"MONDO:0013968":null,"MONDO:0014023":null,"MONDO:0014139":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null,"MONDO:0014165":null,"MONDO:0014248":null,"MONDO:0014270":null,"MONDO:0014271":null,"MONDO:0014318":null,"MONDO:0014353":null,"MONDO:0014457":null,"MONDO:0014542":null,"MONDO:0014543":null,"MONDO:0014647":null,"MONDO:0014780":null,"MONDO:0014790":null,"MONDO:0014832":null,"MONDO:0014904":null,"MONDO:0026729":null,"MONDO:0029140":null,"MONDO:0030037":null,"MONDO:0032808":null,"MONDO:0032822":null,"MONDO:0033364":null,"MONDO:0033556":null,"MONDO:0033572":null,"MONDO:0033619":null,"MONDO:0040500":null,"MONDO:0054559":null,"MONDO:0060627":null,"MONDO:0060724":null,"MONDO:0859223":null,"MONDO:0859356":null,"MONDO:0859357":null,"MONDO:0957540":null,"MONDO:0957820":null},"xrefs":{"Monarch":{"xref_id":"0015286"}}}


id: PBO:0075098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 147","termid":"PBO:0075098"}


id: GO:0006299
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The repair of mismatched DNA where the gap to be repaired is only one nucleotide. DNA polymerase is the preferred polymerase in short patch repair, performing gap filling DNA synthesis and removal of the 5'-deoxyribose phosphate of the abasic site.","definition_xrefs":["PMID:10660619","PMID:10878254"],"gene_count":0,"genotype_count":0,"name":"obsolete short patch mismatch repair system (obsolete GO:0006299)","synonyms":[{"name":"short patch mismatch repair system","type":"exact"}],"termid":"GO:0006299"}


id: MONDO:0011306
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, congenital, with cerebellar atrophy","secondary_identifiers":["OMIM:603323","MEDGEN:351027","UMLS:C1864028","MESH:C566392"],"synonyms":[{"name":"muscular dystrophy, congenital, with cerebellar atrophy","type":"exact"}],"termid":"MONDO:0011306","xrefs":{"Monarch":{"xref_id":"0011306"}}}


id: GO:0106062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of exit from meiosis.","definition_xrefs":["PMID:11493649","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of exit from meiosis","termid":"GO:0106060"},{"relation_name":"is_a","term_name":"positive regulation of meiotic cell cycle phase transition","termid":"GO:1901995"},{"relation_name":"positively_regulates","term_name":"exit from meiosis","termid":"GO:1990947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of exit from meiosis","termid":"GO:0106062"}


id: PBO:0068626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 6, pseudogene","termid":"PBO:0068626"}


id: GO:0141101
data:
  {"annotated_genes":["SJAG_03367"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64794],"is_not":false,"summary":null,"term":"GO:0141101"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: Catalysis of the reaction: S-adenosyl-L-methionine + uridine44 in tRNASer = 2'-O-methyluridine44 in tRNASer + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:18025252","RHEA:43100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (uridine) methyltransferase activity","termid":"GO:0016300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0140098","GO:0140101","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"tRNA(Ser) (uridine(44)-2'-O-)-methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-12368","Reactome:R-HSA-6788707","EC:2.1.1.211"],"synonyms":[{"name":"tRNA(Ser) (uracil(44)-2'-O-)-methyltransferase activity","type":"exact"}],"termid":"GO:0141101","terms_by_termid":{"GO:0141101":null}}


id: MONDO:0033056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic facial cleft (obsolete MONDO:0033056)","secondary_identifiers":["Orphanet:414726"],"termid":"MONDO:0033056","xrefs":{"Monarch":{"xref_id":"0033056"}}}


id: SO:0001829
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A contig composed of mRNA_reads.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contig","termid":"SO:0000149"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA_contig","synonyms":[{"name":"mRNA contig","type":"related"}],"termid":"SO:0001829"}


id: MONDO:0018635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic phalangeal acro-osteolysis","secondary_identifiers":["UMLS:C5680064","MEDGEN:1803504","Orphanet:444316","GARD:21860"],"synonyms":[{"name":"idiopathic phalangeal acroosteolysis","type":"exact"}],"termid":"MONDO:0018635","xrefs":{"Monarch":{"xref_id":"0018635"}}}


id: PBO:0054318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1710","termid":"PBO:0054318"}


id: GO:0140581
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109893],"is_not":false,"summary":null,"term":"GO:0140581"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cu+(in) = ADP + phosphate + Cu+(out).","definition_xrefs":["RHEA:25792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copper ion transmembrane transporter activity","termid":"GO:0005375"},{"relation_name":"is_a","term_name":"P-type ion transporter activity","termid":"GO:0015662"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"P-type monovalent copper transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-14455","EC:7.2.2.8"],"termid":"GO:0140581","terms_by_termid":{"GO:0140581":null}}


id: PBO:0049523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Q variant histone 1, pseudogene","termid":"PBO:0049523"}


id: GO:1900403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A negative regulation of transcription from RNA polymerase II promoter that results in negative regulation of cellular amino acid biosynthetic process.","definition_xrefs":["GOC:mah","GOC:TermGenie","PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900403)","synonyms":[{"name":"negative regulation of amino acid biosynthetic process by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid anabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid biosynthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid formation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of cellular amino acid synthesis by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900403"}


id: FYPO:0003361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of superoxide dismutase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal superoxide dismutase activity","termid":"FYPO:0003361"}


id: GO:0062164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of pseudohyphal septin ring assembly.","definition_xrefs":["PMID:29567712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of cytoskeleton organization","termid":"GO:0051493"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"pseudohyphal septin ring assembly","termid":"GO:0062163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"regulation of pseudohyphal septin ring assembly","termid":"GO:0062164"}


id: MONDO:0011051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysplastic cortical hyperostosis","termid":"MONDO:0016357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"lethal short-limb skeletal dysplasia, Al Gazali type","secondary_identifiers":["MEDGEN:330467","OMIM:601356","MESH:C537598","GARD:4827","Orphanet:646136","UMLS:C1832435"],"synonyms":[{"name":"dysplastic cortical hyperostosis, Al-Gazali type","type":"exact"},{"name":"lethal neonatal short limb dwarfism","type":"related"},{"name":"lethal short limb skeletal dysplasia Al Gazali type","type":"related"},{"name":"lethal short-limb skeletal dysplasia, Al Gazali type","type":"exact"}],"termid":"MONDO:0011051","xrefs":{"Monarch":{"xref_id":"0011051"}}}


id: MONDO:0021146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Various conditions with the symptom of headache. Headache disorders are classified into major groups, such as primary headache disorders (based on characteristics of their headache symptoms) and secondary headache disorders (based on their etiologies). (International Classification of Headache Disorders, 2nd ed. Cephalalgia 2004: suppl 1)","definition_xrefs":["MESH:D020773"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"neurological pain disorder","termid":"MONDO:0700057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"headache disorder","secondary_identifiers":["MEDGEN:140743","UMLS:C0393735","SCTID:230461009","EFO:0009550"],"synonyms":[{"name":"cephalgia syndrome","type":"related"},{"name":"cephalgia syndromes","type":"related"},{"name":"chronic daily headache","type":"related"},{"name":"chronic daily headaches","type":"related"},{"name":"chronic headache","type":"related"},{"name":"chronic headaches","type":"related"},{"name":"daily headache, chronic","type":"related"},{"name":"daily headaches, chronic","type":"related"},{"name":"headache disorder","type":"exact"},{"name":"headache syndrome","type":"related"},{"name":"headache syndromes","type":"related"},{"name":"headache, chronic","type":"related"},{"name":"headache, chronic daily","type":"related"},{"name":"headache, intractable","type":"related"},{"name":"headaches, chronic","type":"related"},{"name":"headaches, chronic daily","type":"related"},{"name":"headaches, intractable","type":"related"},{"name":"intractable headache","type":"related"},{"name":"intractable headaches","type":"related"},{"name":"syndrome, headache","type":"related"}],"termid":"MONDO:0021146","xrefs":{"Monarch":{"xref_id":"0021146"}}}


id: PBO:0046134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF5 divergent transcript","termid":"PBO:0046134"}


id: PR:Q92356
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle-associated membrane protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptobrevin homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.11","secondary_identifiers":["UniProtKB:Q92356"],"synonyms":[{"name":"Spom972h-VAMP4","type":"exact"}],"termid":"PR:Q92356"}


id: PATO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A strength quality inhering in a bearer by virtue of the bearer's disposition to lose strength.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"strength","termid":"PATO:0001230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatigability","termid":"PATO:0001815"}


id: PATO:0000114
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000114 temperature sensitivity (obsolete PATO:0000114)","termid":"PATO:0000114"}


id: PBO:0120153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the TOM (translocase of outer membrane) complex; involved in recognition and initial import steps for all mitochondrially-directed proteins, acting as a receptor for incoming precursors; role in the distribution of tail-anchored proteins between mitochondria and peroxisomes; moonlighting role as a transcriptional regulator of mitochondrial proteins; age-dependent reduction in Tom70p results in mitochondrial dysfunction, a hallmark of aging; localizes to mitochondria–ER contact sites","termid":"PBO:0120153"}


id: PBO:0047878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(4)(q31.1)","termid":"PBO:0047878"}


id: PBO:0003874
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.31","termid":"PBO:0003874"}


id: GO:0010818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a T cell in response to an external stimulus. A T cell is a type of lymphocyte whose defining characteristic is the expression of a T cell receptor complex.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"},{"relation_name":"is_a","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell chemotaxis","synonyms":[{"name":"T-cell chemotaxis","type":"exact"}],"termid":"GO:0010818"}


id: PBO:0079968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 6","termid":"PBO:0079968"}


id: PBO:0080228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin K epoxide reductase complex subunit 1","termid":"PBO:0080228"}


id: MONDO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A acute monocytic leukemia that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute monocytic leukemia","termid":"MONDO:0007896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"adult acute monocytic leukemia","secondary_identifiers":["NANDO:2200008","NANDO:2200009","EFO:1001933","UMLS:C0280634","NCIT:C8263","DOID:0080149","MEDGEN:128856"],"synonyms":[{"name":"M5b adult acute differentiated monocytic leukaemia","type":"exact"},{"name":"M5b adult acute differentiated monocytic leukemia","type":"exact"},{"name":"M5b adult acute leukaemia","type":"exact"},{"name":"M5b adult acute leukemia","type":"exact"},{"name":"acute monocytic leukaemia","type":"broad"},{"name":"acute monocytic leukaemia of adults","type":"exact"},{"name":"acute monocytic leukemia","type":"broad"},{"name":"acute monocytic leukemia of adults","type":"exact"},{"name":"adult acute differentiated monocytic leukaemia (M5b)","type":"exact"},{"name":"adult acute differentiated monocytic leukemia (M5b)","type":"exact"},{"name":"adult acute monocytic leukemia","type":"exact"}],"termid":"MONDO:0000875","xrefs":{"Monarch":{"xref_id":"0000875"}}}


id: MONDO:0016693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, slowly growing tumor (WHO grade I) typically arising in the wall of the lateral ventricles and composed of large ganglioid astrocytes. It is the most common CNS neoplasm in patients with tuberous sclerosis complex and typically occurs during the first two decades of life. (WHO)","definition_xrefs":["NCIT:C3696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subependymoma","termid":"MONDO:0007667"},{"relation_name":"is_a","term_name":"low-grade astrocytoma","termid":"MONDO:0016685"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subependymal giant cell astrocytoma","secondary_identifiers":["SCTID:449799008","UMLS:C0205768","ICDO:9384/1","MEDGEN:61446","GARD:10632","DOID:5077","Orphanet:251618"],"synonyms":[{"name":"SEGA","type":"exact"},{"name":"subependymal giant cell astrocytic neoplasm","type":"exact"},{"name":"subependymal giant cell astrocytic tumor","type":"exact"},{"name":"subependymal giant cell astrocytic tumour","type":"exact"},{"name":"subependymal giant cell astrocytoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0016693","xrefs":{"Monarch":{"xref_id":"0016693"}}}


id: PBO:0002043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic mitochondrial protein (predicted)","termid":"PBO:0002043"}


id: GO:0090414
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of molybdate ions out of the vacuole.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdate ion transport","termid":"GO:0015689"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"molybdate ion export from vacuole","termid":"GO:0090414"}


id: GO:0038034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the absence of a ligand or the withdrawal of a ligand from a receptor.","definition_xrefs":["GOC:pr","PMID:15044679","GOC:ppm","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"signal transduction in absence of ligand","synonyms":[{"name":"addiction receptor signaling pathway","type":"broad"},{"name":"basal signaling","type":"narrow"},{"name":"dependence receptor signaling pathway","type":"broad"},{"name":"negative signal transduction","type":"related"},{"name":"non-classical signal transduction","type":"broad"},{"name":"signal transduction in absence of agonist","type":"exact"}],"termid":"GO:0038034"}


id: MONDO:0000035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glucocorticoid deficiency (obsolete MONDO:0000035)","termid":"MONDO:0000035","xrefs":{"Monarch":{"xref_id":"0000035"}}}


id: GO:1903388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle uncoating.","definition_xrefs":["GO_REF:0000058","GOC:pad","PMID:21563316","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein depolymerization","termid":"GO:1901879"},{"relation_name":"regulates","term_name":"synaptic vesicle uncoating","termid":"GO:0016191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of synaptic vesicle uncoating","synonyms":[{"name":"regulation of synaptic vesicle coat depolymerization","type":"exact"},{"name":"regulation of synaptic vesicle coat protein depolymerization","type":"exact"}],"termid":"GO:1903388"}


id: GO:0015240
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of amiloride from one side of a membrane to the other. Amiloride is a potent and specific inhibitor of sodium ion entry into cells. It is used as a potassium-sparing diuretic.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete amiloride transmembrane transporter activity (obsolete GO:0015240)","synonyms":[{"name":"amiloride transporter activity","type":"related"}],"termid":"GO:0015240"}


id: PBO:0029361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_periphery","termid":"PBO:0029361"}


id: PBO:0067164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 217, pseudogene","termid":"PBO:0067164"}


id: PBO:0050037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR beta 5","termid":"PBO:0050037"}


id: GO:0005037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete death receptor adaptor protein activity (obsolete GO:0005037)","synonyms":[{"name":"death receptor adaptor protein activity","type":"exact"}],"termid":"GO:0005037"}


id: MONDO:1011985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early retinal degeneration, non-human animal","secondary_identifiers":["OMIA:001297"],"termid":"MONDO:1011985","xrefs":{"Monarch":{"xref_id":"1011985"}}}


id: PBO:0067407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 517, pseudogene","termid":"PBO:0067407"}


id: PATO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the bearer's being hardened by the deposition of calcium into bone.","definition_xrefs":["MAMMALOGY:MAMMALOGY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcified","termid":"PATO:0001447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ossified","termid":"PATO:0001448"}


id: GO:0031054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process involved in the conversion of a pre-microRNA transcript into a mature microRNA molecule.","definition_xrefs":["GOC:sl","PMID:15211354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miRNA processing","termid":"GO:0035196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"pre-miRNA processing","synonyms":[{"name":"pre-microRNA processing","type":"exact"}],"termid":"GO:0031054"}


id: GO:0044680
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex of two polypeptides which catalyzes the transfer of methyl group from methylthiol to coenzyme M during methanogenesis.","definition_xrefs":["PMID:9371433","PMID:11073950","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"methylthiol:coenzyme M methyltransferase complex","synonyms":[{"name":"methylthiol coenzyme M methyl transferase complex","type":"exact"},{"name":"methylthiol:CoM methyltransferase complex","type":"exact"},{"name":"methylthiol:coenzyme M methyl transferase complex","type":"exact"}],"termid":"GO:0044680"}


id: FYECO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which mycophenolic acid (MPA) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ MPA","synonyms":[{"name":"+ mycophenolic acid","type":"exact"}],"termid":"FYECO:0000388"}


id: GO:0072183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"is_a","term_name":"negative regulation of kidney development","termid":"GO:0090185"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation involved in kidney development","termid":"GO:2000697"},{"relation_name":"negatively_regulates","term_name":"nephron tubule epithelial cell differentiation","termid":"GO:0072160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072183"}


id: GO:0018496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dihydroxycyclohexane-1-carboxyl-CoA = 2 H+ + 2 e- + 6-oxo-2-hydroxycyclohexane-1-carboxyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dihydroxycyclohexane-1-carboxyl-CoA dehydrogenase activity (obsolete GO:0018496)","termid":"GO:0018496"}


id: MONDO:0009946
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemolytic anemia due to pyrimidine 5' nucleotidase deficiency is a rare, hereditary, hemolytic anemia due to an erythrocyte nucleotide metabolism disorder characterized by mild to moderate hemolytic anemia associated with basophilic stippling and the accumulation of high concentrations of pyrimidine nucleotides within the erythrocyte. Patients present with variable features of jaundice, splenomegaly, hepatomegaly, gallstones, and sometimes require transfusions. Rare cases of mild development delay and learning difficulties are reported.","definition_xrefs":["Orphanet:35120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nonspherocytic hemolytic anemia","termid":"MONDO:0006506"},{"relation_name":"is_a","term_name":"inborn disorder of pyrimidine metabolism","termid":"MONDO:0019238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"hemolytic anemia due to pyrimidine 5' nucleotidase deficiency","secondary_identifiers":["OMIM:266120","DOID:0051007","GARD:16635","MEDGEN:341470","MESH:C564859","UMLS:C1849507"],"synonyms":[{"name":"P5N deficiency","type":"exact"},{"name":"UMPH1 deficiency","type":"exact"},{"name":"anemia, congenital, nonspherocytic hemolytic, 8","type":"exact"},{"name":"anemia, hemolytic, due to UMPH1 deficiency","type":"exact"},{"name":"hemolytic anaemia due to P5N deficiency","type":"related"},{"name":"hemolytic anaemia due to UMPH1 deficiency","type":"related"},{"name":"hemolytic anemia due to P5N deficiency","type":"exact"},{"name":"hemolytic anemia due to UMPH1 deficiency","type":"exact"},{"name":"pyrimidine 5-prime nucleotidase deficiency, hemolytic anaemia due to","type":"exact"},{"name":"pyrimidine 5-prime nucleotidase deficiency, hemolytic anemia due to","type":"exact"},{"name":"uridine 5'-monophosphate hydrolase deficiency","type":"exact"},{"name":"uridine 5-prime monophosphate hydrolase deficiency, hemolytic anaemia due to","type":"exact"},{"name":"uridine 5-prime monophosphate hydrolase deficiency, hemolytic anemia due to","type":"exact"}],"termid":"MONDO:0009946","xrefs":{"Monarch":{"xref_id":"0009946"}}}


id: GO:0023007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Binding of a diffusible ligand to a T cell receptor as part of a signaling process.","definition_xrefs":["GOC:jid","GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete ligand binding to T cell receptor (obsolete GO:0023007)","synonyms":[{"name":"ligand binding to T cell receptor","type":"exact"}],"termid":"GO:0023007"}


id: FYPO:0003330
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the new mitotic spindle pole body is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to mitotic spindle pole body","termid":"FYPO:0002967"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"normal protein localization to new mitotic spindle pole body","synonyms":[{"name":"normal asymmetric protein localization to new mitotic spindle pole body","type":"exact"},{"name":"normal protein localisation to new mitotic spindle pole body","type":"exact"},{"name":"normal protein localization to new mitotic SPB","type":"exact"},{"name":"normal protein localization to new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"normal protein localization to new spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0003330"}


id: GO:1901802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 1,5-anhydro-D-fructose.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:15716041","MetaCyc:PWY-6992","UniPathway:UPA00738"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"polyol catabolic process","termid":"GO:0046174"},{"relation_name":"is_a","term_name":"monosaccharide catabolic process","termid":"GO:0046365"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"1,5-anhydro-D-fructose metabolic process","termid":"GO:1901801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"1,5-anhydro-D-fructose catabolic process","synonyms":[{"name":"1,5-anhydro-D-fructose breakdown","type":"exact"},{"name":"1,5-anhydro-D-fructose catabolism","type":"exact"},{"name":"1,5-anhydro-D-fructose degradation","type":"exact"}],"termid":"GO:1901802"}


id: PBO:0065846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11A, member RAS oncogene family pseudogene 2","termid":"PBO:0065846"}


id: PBO:0086035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function found in mitochondria; expression is regulated by transcription factors involved in pleiotropic drug resistance, Pdr1p and Yrr1p; not an essential gene; YLR346C has a paralog, YGR035C, that arose from the whole genome duplication","termid":"PBO:0086035"}


id: PBO:0048832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit gamma transducin 2","termid":"PBO:0048832"}


id: PBO:0043009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer hallmarks in lung lncRNA 1","termid":"PBO:0043009"}


id: GO:0034835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-mercaptobenzothiazole + 1/2 O2 = 6-hydroxy-2-mercaptobenzothiazole.","definition_xrefs":["UM-BBD_reactionID:r1178"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-mercaptobenzothiazole monooxygenase activity (obsolete GO:0034835)","termid":"GO:0034835"}


id: PR:O74473
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc11 gene.","definition_xrefs":["UniProtKB:O74473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septation initiation network scaffold protein cdc11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.11c","synonyms":[{"name":"SIN scaffold protein cdc11 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc11","type":"exact"},{"name":"cell division control protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74473"}


id: MONDO:0003076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinoblastoma that only involves a single eye.","definition_xrefs":["NCIT:C8714"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"unilateral retinoblastoma","secondary_identifiers":["UMLS:C0854915","MEDGEN:208929","DOID:4651"],"termid":"MONDO:0003076","xrefs":{"Monarch":{"xref_id":"0003076"}}}


id: SO:0001022
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The point within a chromosome where an inversion begins or ends.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion_breakpoint","synonyms":[{"name":"inversion breakpoint","type":"exact"}],"termid":"SO:0001022"}


id: MONDO:1012026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"black hair follicular dysplasia, non-human animal","termid":"MONDO:1011734"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"black hair follicular dysplasia, cattle","secondary_identifiers":["OMIA:000110-9913"],"termid":"MONDO:1012026","xrefs":{"Monarch":{"xref_id":"1012026"}}}


id: GO:0070056
data:
  {"annotated_genes":["SJAG_04922","SJAG_00405","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100841,104934,120612],"is_not":false,"summary":null,"term":"GO:0070056"}]},"cv_name":"cellular_component","definition":"The region of the prospore membrane that extends to surround the spore nucleus; coated with specific proteins that are thought to play a role in prospore membrane organization.","definition_xrefs":["GOC:mah","PMID:14702385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"prospore membrane","termid":"GO:0005628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_03536":null,"SJAG_04922":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005628"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005628","GO:0005575"],"is_obsolete":false,"name":"prospore membrane leading edge","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore membrane leading edge","type":"exact"}],"termid":"GO:0070056","terms_by_termid":{"GO:0070056":null}}


id: PBO:0079594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 D N-terminal like (pseudogene)","termid":"PBO:0079594"}


id: MONDO:0018318
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disorder of asparagine metabolism (obsolete MONDO:0018318)","secondary_identifiers":["Orphanet:391381"],"termid":"MONDO:0018318","xrefs":{"Monarch":{"xref_id":"0018318"}}}


id: GO:0051749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole acetic acid + S-adenosyl-methionine = methyl indole acetic acid ester + S-adenosyl-homocysteine.","definition_xrefs":["PMID:16169896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"indole acetic acid carboxyl methyltransferase activity","synonyms":[{"name":"IAA carboxyl methyltransferase activity","type":"exact"}],"termid":"GO:0051749"}


id: GO:0030741
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + myo-inositol = 1D-1-O-methyl-myo-inositol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:17565","EC:2.1.1.40"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"inositol 1-methyltransferase activity","secondary_identifiers":["MetaCyc:MYO-INOSITOL-3-O-METHYLTRANSFERASE-RXN","KEGG_REACTION:R01188"],"synonyms":[{"name":"S-adenosyl-L-methionine:1D-myo-inositol 1-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:myo-inositol 3-O-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine:myo-inositol 3-methyltransferase activity","type":"related"},{"name":"inositol 3-O-methyltransferase (name based on 1L-numbering system and not 1D-numbering)","type":"related"},{"name":"inositol 3-O-methyltransferase activity","type":"related"},{"name":"inositol D-1-methyltransferase activity","type":"related"},{"name":"myo-inositol 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0030741"}


id: MONDO:0009181
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by generalized blistering associated with muscular dystrophy.","definition_xrefs":["Orphanet:257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of plectin","termid":"MONDO:0016198"},{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"},{"relation_name":"is_a","term_name":"PLEC-related muscular dystrophy-epidermolysis bullosa simplex spectrum disorder","termid":"MONDO:1060109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 5B, with muscular dystrophy","secondary_identifiers":["DOID:0090017","OMIM:226670","MESH:C535955","GARD:2137","SCTID:723308003","NANDO:2201376","MEDGEN:418981","UMLS:C2931072"],"synonyms":[{"name":"EBS-MD","type":"exact"},{"name":"EBSMD","type":"related"},{"name":"Epidermolysa bullosa simplex and limb girdle muscular dystrophy","type":"related"},{"name":"Epidermolysa bullosa simplex with muscular dystrophy","type":"related"},{"name":"MD-EBS","type":"related"},{"name":"MDEBS","type":"related"},{"name":"epidermolysis bullosa simplex - limb girdle muscular dystrophy","type":"related"},{"name":"epidermolysis bullosa simplex 5B, with muscular dystrophy","type":"exact"},{"name":"epidermolysis bullosa simplex and limb-girdle muscular dystrophy","type":"exact"},{"name":"epidermolysis bullosa simplex with muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy with epidermolysis bullosa simplex","type":"exact"}],"termid":"MONDO:0009181","xrefs":{"Monarch":{"xref_id":"0009181"}}}


id: PBO:0001766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDR subfamily","termid":"PBO:0001766"}


id: GO:1901167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-chlorocatechol.","definition_xrefs":["UniPathway:UPA00083","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"3-chlorocatechol metabolic process","synonyms":[{"name":"3-chlorocatechol metabolism","type":"exact"}],"termid":"GO:1901167"}


id: PBO:0108971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 2C","termid":"PBO:0108971"}


id: GO:0071163
data:
  {"annotated_genes":["SJAG_02607","SJAG_04879","SJAG_01823","SJAG_04995","SJAG_02908","SJAG_00327","SJAG_02667"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111987,115624,117464,109381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140529"},{"annotations":[80211,57685,73940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902977"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the DNA replication preinitiation complex, a protein-DNA complex that is assembled at DNA replication origins as part of initiation of DNA replication. The complex consists of proteins that initiate the DNA binding, melt the helix and enable helicase activity.","definition_xrefs":["PMID:28209641","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"protein-DNA complex assembly","termid":"GO:0065004"},{"relation_name":"part_of","term_name":"nuclear DNA replication","termid":"GO:0033260"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_01823":null,"SJAG_02607":null,"SJAG_02667":null,"SJAG_02908":null,"SJAG_04879":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0008150","GO:0044085","GO:0006259","GO:0065003"],"is_obsolete":false,"name":"DNA replication preinitiation complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1902293","GO:1902316"],"synonyms":[{"name":"DNA replication preinitiation complex formation","type":"exact"},{"name":"pre-IC complex assembly","type":"exact"}],"termid":"GO:0071163","terms_by_termid":{"GO:0140529":null,"GO:1902977":null}}


id: SO:0005855
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A collection of related genes.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_group","synonyms":[{"name":"gene group","type":"exact"}],"termid":"SO:0005855"}


id: PBO:0028508
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transposable_element-derived_small_RNA_level","termid":"PBO:0028508"}


id: GO:0016695
data:
  {"annotated_genes":["SJAG_02497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008901"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen acts as an electron donor.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on hydrogen as donor","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.12.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on hydrogen as donor, other acceptors","type":"narrow"}],"termid":"GO:0016695","terms_by_termid":{"GO:0008901":null}}


id: PR:O74823
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- red5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH domain-containing protein C337.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC337.12","synonyms":[{"name":"Spom972h-red5","type":"exact"}],"termid":"PR:O74823"}


id: PBO:0052282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KDM7A divergent transcript","termid":"PBO:0052282"}


id: GO:0000045
data:
  {"annotated_genes":["SJAG_00004","SJAG_02699","SJAG_02414","SJAG_00645","SJAG_01876","SJAG_01561","SJAG_02640","SJAG_05289","SJAG_03435","SJAG_04991","SJAG_01073","SJAG_05017","SJAG_01283","SJAG_03851","SJAG_04232","SJAG_01467","SJAG_03170","SJAG_00079","SJAG_03100","SJAG_06309","SJAG_04294","SJAG_01251","SJAG_00114","SJAG_02441","SJAG_04502","SJAG_00029","SJAG_01274","SJAG_04655"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60931,72479,72820,73520,74038,74068,74232,74651,75058,75383,78725,78967,80359,80795,81555,81636,81661,82214,94920,96636,105603,106628],"is_not":false,"summary":null,"term":"GO:0000045"},{"annotations":[110600],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061736"},{"annotations":[61389,60010,67305,68380,67368],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061753"}]},"cv_name":"biological_process","definition":"The formation of a double membrane-bounded structure, the autophagosome, that occurs when a specialized membrane sac, called the isolation membrane, starts to enclose a portion of the cytoplasm.","definition_xrefs":["GOC:autophagy","PMID:9412464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"is_a","term_name":"autophagosome organization","termid":"GO:1905037"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00029":null,"SJAG_00079":null,"SJAG_00114":null,"SJAG_00645":null,"SJAG_01073":null,"SJAG_01251":null,"SJAG_01274":null,"SJAG_01283":null,"SJAG_01467":null,"SJAG_01561":null,"SJAG_01876":null,"SJAG_02414":null,"SJAG_02441":null,"SJAG_02640":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03170":null,"SJAG_03435":null,"SJAG_03851":null,"SJAG_04232":null,"SJAG_04294":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04991":null,"SJAG_05017":null,"SJAG_05289":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006914","GO:0044085"],"is_obsolete":false,"name":"autophagosome assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"PAS formation","type":"narrow"},{"name":"autophagic vacuole assembly","type":"exact"},{"name":"autophagic vacuole formation","type":"related"},{"name":"autophagosome biosynthesis","type":"exact"},{"name":"autophagosome formation","type":"exact"}],"termid":"GO:0000045","terms_by_termid":{"GO:0000045":null,"GO:0061736":null,"GO:0061753":null}}


id: MONDO:0005425
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of the lymphatic vessels of the lower extremities that is caused by chronic exposure to irritant soils.","definition_xrefs":["Wikipedia:Podoconiosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elephantiasis","termid":"MONDO:0005424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"podoconiosis","secondary_identifiers":["SCTID:47595008","MEDGEN:473377","DOID:0050138","EFO:0004712","ICD9:457.1","UMLS:C1280469"],"synonyms":[{"name":"elephantiasis from soil","type":"exact"},{"name":"non-filarial elephantiasis","type":"exact"},{"name":"nonfilarial elephantiasis","type":"exact"},{"name":"soil elephantiasis","type":"exact"}],"termid":"MONDO:0005425","xrefs":{"Monarch":{"xref_id":"0005425"}}}


id: GO:0034602
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-oxoglutarate + CoA + NAD+ = succinyl-CoA + CO2 + NADH.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete oxoglutarate dehydrogenase (NAD+) activity (obsolete GO:0034602)","termid":"GO:0034602"}


id: GO:0047557
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-aci-nitropropanoate + H2O + O2 = 3-oxopropanoate + H2O2 + nitrite.","definition_xrefs":["EC:1.7.3.5","RHEA:22372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-aci-nitropropanoate oxidase activity","secondary_identifiers":["MetaCyc:3-ACI-NITROPROPANOATE-OXIDASE-RXN","KEGG_REACTION:R01609"],"synonyms":[{"name":"3-aci-nitropropanoate:oxygen oxidoreductase activity","type":"related"},{"name":"propionate-3-nitronate oxidase activity","type":"related"}],"termid":"GO:0047557"}


id: PBO:0049390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 3, mitochondrial","termid":"PBO:0049390"}


id: PBO:0061410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal pentraxin 1","termid":"PBO:0061410"}


id: GO:1903954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization.","definition_xrefs":["PMID:25281747","GOC:nc","GOC:BHF","GO_REF:0000059","GOC:TermGenie","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization (obsolete GO:1903954)","synonyms":[{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"narrow"},{"name":"positive regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiac muscle cell action potential repolarization","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity involved in atrial cardiomyocyte action potential repolarization","type":"exact"}],"termid":"GO:1903954"}


id: PBO:0003703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Asparagine","termid":"PBO:0003703"}


id: GO:1990618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The ANPR-A:ANP complex is composed of the hormone AMP bound to the extracellular domain of ANPR-A domain. It is formed in the atrium in response to atrial distension (high blood volume) and leads to guanylate cyclase activity of the ANPR-A receptor, thereby elevating intracellular cGMP levels. The end result is a reduction in blood volume and, therefore, a reduction in cardiac output and systemic blood pressure. Therefore, ANPR-A:ANP complex plays a major role in the regulation of blood pressure and salt-fluid volume homeostasis.","definition_xrefs":["PMID:15117952","GOC:ame"],"gene_count":0,"genotype_count":0,"name":"obsolete ANPR-A:ANP complex (obsolete GO:1990618)","synonyms":[{"name":"ANPR-A:ANP complex","type":"exact"}],"termid":"GO:1990618"}


id: PBO:0063776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHF5A pseudogene 3","termid":"PBO:0063776"}


id: PBO:0114441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane P-type proton ATPase, P3-type Pma2","termid":"PBO:0114441"}


id: FYPO:0008074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortical nodes is increased during mitotic interphase.","definition_xrefs":["PMID:10930468"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to medial cortical node","termid":"FYPO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to medial cortical node during interphase","termid":"FYPO:0008074"}


id: GO:0061158
data:
  {"annotated_genes":["SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120396],"is_not":false,"summary":null,"term":"GO:0061158"}]},"cv_name":"biological_process","definition":"An mRNA destabilization process in which one or more RNA-binding proteins associate with the 3'-untranslated region (UTR) of an mRNA.","definition_xrefs":["GOC:dph","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA destabilization","termid":"GO:0061157"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"3'-UTR-mediated mRNA destabilization","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061158","terms_by_termid":{"GO:0061158":null}}


id: MONDO:0006714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal balloon- or sac-like dilatation in the wall of coronary vessels. Most coronary aneurysms are due to coronary atherosclerosis, and the rest are due to inflammatory diseases, such as kawasaki disease.","definition_xrefs":["MESH:D003323"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"heart aneurysm","termid":"MONDO:0006779"},{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"coronary aneurysm","secondary_identifiers":["MEDGEN:3622","DOID:3362","MedDRA:10002348","HP:0030882","EFO:1000881","SCTID:50570003","UMLS:C0010051","ICD9:414.11"],"synonyms":[{"name":"aneurysm of coronary vessels","type":"exact"},{"name":"aneurysmal lesion of coronary artery","type":"exact"},{"name":"arteriovenous aneurysm of coronary vessels","type":"exact"},{"name":"coronary artery aneurysm","type":"related"}],"termid":"MONDO:0006714","xrefs":{"Monarch":{"xref_id":"0006714"}}}


id: GO:0061784
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) from peptidoglycan.","definition_xrefs":["GOC:jh","PMID:22748813","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminidase activity","termid":"GO:0015929"},{"relation_name":"is_a","term_name":"peptidoglycan muralytic activity","termid":"GO:0061783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"peptidoglycan N-acetylglucosaminidase activity","termid":"GO:0061784"}


id: PBO:0064578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member A","termid":"PBO:0064578"}


id: MONDO:0022607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A Brenner tumor that involves the vagina.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal neoplasm","termid":"MONDO:0021050"},{"relation_name":"is_a","term_name":"Brenner tumor","termid":"MONDO:0024235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extraovarian Brenner tumor of the vagina","synonyms":[{"name":"Brenner tumor of the vagina","type":"related"},{"name":"Brenner tumour of the vagina","type":"related"},{"name":"extraovarian Brenner tumor of the vagina","type":"exact"},{"name":"vagina Brenner tumor","type":"exact"},{"name":"vagina Brenner tumour","type":"exact"}],"termid":"MONDO:0022607","xrefs":{"Monarch":{"xref_id":"0022607"}}}


id: GO:0002319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a B cell acquires the specialized features of a memory B cell. Memory B cells are cells that can respond rapidly to antigen re-exposure by production of high-affinity antibody.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature B cell differentiation involved in immune response","termid":"GO:0002313"},{"relation_name":"is_a","term_name":"immunological memory formation process","termid":"GO:0090715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory B cell differentiation","synonyms":[{"name":"memory B cell development","type":"related"},{"name":"memory B lymphocyte differentiation","type":"exact"},{"name":"memory B-cell differentiation","type":"exact"},{"name":"memory B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002319"}


id: PBO:0016956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein New9","termid":"PBO:0016956"}


id: PBO:0056769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 21A pseudogene 1","termid":"PBO:0056769"}


id: PBO:0050770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIV-1 Tat specific factor 1","termid":"PBO:0050770"}


id: GO:0043379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a newly activated T cell acquires specialized features of a memory T cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation involved in immune response","termid":"GO:0002292"},{"relation_name":"is_a","term_name":"immunological memory formation process","termid":"GO:0090715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"memory T cell differentiation","synonyms":[{"name":"memory T cell development","type":"related"},{"name":"memory T lymphocyte differentiation","type":"exact"},{"name":"memory T-cell differentiation","type":"exact"},{"name":"memory T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0043379"}


id: PBO:0004002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Spb4 (predicted)","termid":"PBO:0004002"}


id: MONDO:0013525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the DNAL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 16","secondary_identifiers":["UMLS:C3151460","GARD:15743","OMIM:614017","DOID:0110613","MEDGEN:462810"],"synonyms":[{"name":"CILD16","type":"exact"},{"name":"DNAL1 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 16","type":"related"},{"name":"ciliary dyskinesia, primary, 16, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 16","type":"exact"},{"name":"primary ciliary dyskinesia 16 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in DNAL1","type":"exact"},{"name":"primary ciliary dyskinesia type 16","type":"exact"}],"termid":"MONDO:0013525","xrefs":{"Monarch":{"xref_id":"0013525"}}}


id: PBO:0090276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PPR repeat protein Ppr6","termid":"PBO:0090276"}


id: GO:0021876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by binding of an extracellular ligand to a Notch receptor on the surface of the target cell that contributes to the self renewal of neuroblasts in the forebrain.","definition_xrefs":["GOC:jid","PMID:16226447","GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Notch signaling pathway","termid":"GO:0007219"},{"relation_name":"part_of","term_name":"forebrain neuroblast division","termid":"GO:0021873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Notch signaling pathway involved in forebrain neuroblast division","synonyms":[{"name":"Notch signalling pathway in forebrain neuroblast division","type":"exact"}],"termid":"GO:0021876"}


id: PBO:0064039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 73","termid":"PBO:0064039"}


id: PBO:0050349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 52","termid":"PBO:0050349"}


id: PBO:0054372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1766","termid":"PBO:0054372"}


id: PBO:0078808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 25-1","termid":"PBO:0078808"}


id: GO:0015842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The active transport of aminergic neurotransmitters into a synaptic vesicle. This import is fuelled by an electrochemical gradient across the vesicle membrane, established by the action proton pumps.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amine transport","termid":"GO:0015837"},{"relation_name":"is_a","term_name":"neurotransmitter loading into synaptic vesicle","termid":"GO:0098700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"aminergic neurotransmitter loading into synaptic vesicle","termid":"GO:0015842"}


id: PBO:0047793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box F2","termid":"PBO:0047793"}


id: PBO:0053109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine carboxyl methyltransferase 1","termid":"PBO:0053109"}


id: PBO:0111534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flocculin-like protein","termid":"PBO:0111534"}


id: FYPO:0003305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which polar microtubules fail to interdigitate properly, and two partially or completely separated microtubule structures, usually V-shaped, each corresponding to one half of the spindle, are present.","definition_xrefs":["PMID:9348288","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"output_of","term_name":"abnormal mitotic spindle midzone assembly","termid":"FYPO:0003304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0000337","FYPO:0000120","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000641","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"separate mitotic half spindles present","synonyms":[{"name":"broken spindle interzone","type":"related"},{"name":"broken spindle midzone","type":"related"},{"name":"loss of interdigitation between mitotic half spindles","type":"exact"},{"name":"separate half spindles present during mitosis","type":"exact"},{"name":"separate half spindles present during mitotic cell cycle","type":"related"},{"name":"separate mitotic half spindles present during vegetative growth","type":"exact"},{"name":"spindle fraying","type":"related"}],"termid":"FYPO:0003305"}


id: GO:0016048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a temperature stimulus (hot or cold) is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"detection of external stimulus","termid":"GO:0009581"},{"relation_name":"is_a","term_name":"detection of abiotic stimulus","termid":"GO:0009582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of temperature stimulus","synonyms":[{"name":"detection of temperature","type":"exact"},{"name":"detection of thermal stimulus","type":"exact"},{"name":"perception of temperature","type":"related"}],"termid":"GO:0016048"}


id: MOD:00226
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82508],"is_not":false,"summary":null,"term":"MOD:00226"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to 1'-(8alpha-FAD)-L-histidine.","definition_xrefs":["PubMed:10585424","PubMed:1396672","RESID:AA0221","PubMed:4339951","Unimod:50#H","PubMed:9261083","DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"is_obsolete":false,"name":"1'-(8alpha-FAD)-L-histidine","references_by_uniquename":{"PMID:36408920":null},"synonyms":[{"name":"(S)-2-amino-3-(1-[8alpha riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]imidazol-4-yl)propanoic acid","type":"exact"},{"name":"1'-(8alpha-FAD)-L-histidine","type":"exact"},{"name":"8alpha-(N(epsilon)-histidyl)FAD","type":"exact"},{"name":"8alpha-(N1'-histidyl)FAD","type":"exact"},{"name":"8alpha-N3-histidyl FAD","type":"related"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES Tele-8alpha-FAD histidine","type":"exact"},{"name":"N theta and N pi-(8alpha-Flavin) (on Histidine)","type":"exact"},{"name":"N(tau)-(8alpha-FAD)-histidine","type":"exact"},{"name":"Nt8aFADHis","type":"exact"},{"name":"tele-(8alpha-FAD)-histidine","type":"exact"}],"termid":"MOD:00226","terms_by_termid":{"MOD:00226":null}}


