# terms

id: GO:0097041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phenolic phthiocerol, a phthiocerol derivative having a 4-hydroxyphenyl substituent at the 29-position.","definition_xrefs":["GOC:dph","PMID:9201977","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phenolic phthiocerol biosynthetic process","synonyms":[{"name":"phenolic phthiocerol anabolism","type":"exact"},{"name":"phenolic phthiocerol biosynthesis","type":"exact"},{"name":"phenolic phthiocerol formation","type":"exact"},{"name":"phenolic phthiocerol synthesis","type":"exact"},{"name":"phenolphthiocerol biosynthesis","type":"exact"}],"termid":"GO:0097041"}


id: PBO:0053287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain containing 1","termid":"PBO:0053287"}


id: PBO:0047916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FRA10A associated CGG repeat 1","termid":"PBO:0047916"}


id: PBO:0060782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B10","termid":"PBO:0060782"}


id: PBO:0029420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_palmitoylation","termid":"PBO:0029420"}


id: GO:0010510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of acetyl-CoA from pyruvate. In most organisms, this pathway links glycolysis to the TCA cycle, by a series of three reactions carried out by a multisubunit complex called the 'pyruvate dehydrogenase complex', even though pyruvate dehydrogenase activity describes only one of those reactions.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of acyl-CoA biosynthetic process","termid":"GO:0050812"},{"relation_name":"regulates","term_name":"pyruvate decarboxylation to acetyl-CoA","termid":"GO:0006086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006790","GO:0006629","GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of pyruvate decarboxylation to acetyl-CoA","secondary_identifiers":["Reactome:R-HSA-204174"],"synonyms":[{"name":"regulation of acetyl-CoA biosynthetic process from pyruvate","type":"exact"}],"termid":"GO:0010510"}


id: PBO:0091737
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sre1 and Scp1 form a functional 4:4 oligomer","termid":"PBO:0091737"}


id: GO:0033519
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytyl diphosphate, (2E)-3,7,11,15-tetramethylhexadec-2-en-1-yl trihydrogen diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid metabolic process","termid":"GO:0006644"},{"relation_name":"is_a","term_name":"terpenoid metabolic process","termid":"GO:0006721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"phytyl diphosphate metabolic process","synonyms":[{"name":"phytyl diphosphate metabolism","type":"exact"}],"termid":"GO:0033519"}


id: MONDO:0020221
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary glaucoma due to a proliferation and differentiation anomaly (obsolete MONDO:0020221)","secondary_identifiers":["Orphanet:98637"],"termid":"MONDO:0020221","xrefs":{"Monarch":{"xref_id":"0020221"}}}


id: PBO:0059310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L51 pseudogene 1","termid":"PBO:0059310"}


id: PBO:0055794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl oxidase like 3","termid":"PBO:0055794"}


id: MONDO:0012566
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 11","secondary_identifiers":["MEDGEN:370932","OMIM:610836","UMLS:C1970512"],"synonyms":[{"name":"AUTS11","type":"exact"},{"name":"autism susceptibility 11","type":"exact"},{"name":"autism, susceptibility to, 11","type":"exact"}],"termid":"MONDO:0012566","xrefs":{"Monarch":{"xref_id":"0012566"}}}


id: GO:0018964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving propylene, an alkene produced by catalytic or thermal cracking of hydrocarbons or as a by-product of petroleum refining. It is used mainly in the preparation of alkylates for gasoline and in the production of polypropylene, acrylonitrile, propylene oxide and a number of other industrial chemicals.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"propylene metabolic process","secondary_identifiers":["UM-BBD_pathwayID:pro"],"synonyms":[{"name":"propylene metabolism","type":"exact"}],"termid":"GO:0018964"}


id: PBO:0120007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 64, pseudogene","termid":"PBO:0120007"}


id: GO:0045263
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. All non-F1 subunits of a hydrogen-transporting ATP synthase, including integral and peripheral membrane proteins.","definition_xrefs":["PMID:10838056"],"gene_count":0,"genotype_count":0,"name":"obsolete proton-transporting ATP synthase complex, coupling factor F(o) (obsolete GO:0045263)","synonyms":[{"name":"hydrogen-transporting ATP synthase complex, coupling factor F(o)","type":"exact"},{"name":"hydrogen-transporting ATP synthase, F0 sector","type":"exact"},{"name":"hydrogen-transporting ATP synthase, coupling factor CF(0)","type":"narrow"},{"name":"proton-transporting ATP synthase complex, coupling factor F(0)","type":"exact"}],"termid":"GO:0045263"}


id: GO:0021789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a branchiomotor neuron growth cone in the branchial arch mesenchyme is directed to a specific target site in the branchial arch mesenchyme. Branchiomotor neurons are located in the hindbrain and innervate branchial arch-derived muscles that control jaw movements, facial expression, the larynx, and the pharynx.","definition_xrefs":["GO_REF:0000021","GOC:jid","GOC:dph","GOC:cls","GOC:dgh","PMID:14699587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiomotor neuron axon guidance","termid":"GO:0021785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomotor neuron axon guidance in branchial arch mesenchyme","termid":"GO:0021789"}


id: SO:1000136
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An autosynaptic chromosome is the aneuploid product of recombination between a pericentric inversion and a cytologically wild-type chromosome.","definition_xrefs":["PMID:6804304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_structure_variation","termid":"SO:1000183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosynaptic_chromosome","synonyms":[{"name":"(Drosophila)A","type":"related"},{"name":"autosynaptic chromosome","type":"exact"}],"termid":"SO:1000136"}


id: GO:0018306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0289"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulfide (obsolete GO:0018306)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via bis-L-cysteinyl-L-N3'-histidino-L-serinyl tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018306"}


id: MONDO:0013328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the ZNF513 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 58","secondary_identifiers":["UMLS:C3150879","ICD10CM:H35.5","MEDGEN:462229","GARD:15682","DOID:0110362","OMIM:613617"],"synonyms":[{"name":"RP58","type":"exact"},{"name":"ZNF513 retinitis pigmentosa","type":"exact"},{"name":"retinitis pigmentosa 58","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in ZNF513","type":"exact"},{"name":"retinitis pigmentosa type 58","type":"exact"}],"termid":"MONDO:0013328","xrefs":{"Monarch":{"xref_id":"0013328"}}}


id: GO:0032936
data:
  {"annotated_genes":["SJAG_04018","SJAG_01307"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77443,107863],"is_not":false,"summary":null,"term":"GO:0032936"}]},"cv_name":"cellular_component","definition":"A protein complex formed by the association of sterol regulatory element binding protein (SREBP) and SREBP-cleavage-activating protein (SCAP) in the ER membrane; in the absence of sterols, the SREBP-SCAP complex is packaged into COPII vesicles and travels to the Golgi apparatus to be processed.","definition_xrefs":["PMID:12923525"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01307":null,"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SREBP-SCAP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Sre1-Scp1 complex","type":"exact"}],"termid":"GO:0032936","terms_by_termid":{"GO:0032936":null}}


id: PBO:0051964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPRIP like 2","termid":"PBO:0051964"}


id: MONDO:0011058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the COCH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 9","secondary_identifiers":["MESH:C563335","OMIM:601369","GARD:18105","MEDGEN:371327","DOID:0110593","UMLS:C1832425"],"synonyms":[{"name":"COCH autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"DFNA9","type":"narrow"},{"name":"autosomal dominant deafness 9","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 9","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in COCH","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 9","type":"narrow"},{"name":"deafness, autosomal dominant 9","type":"narrow"},{"name":"deafness, autosomal dominant type 9","type":"narrow"}],"termid":"MONDO:0011058","xrefs":{"Monarch":{"xref_id":"0011058"}}}


id: PBO:0017527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLI interacting factor family phosphatase Psr1 (predicted)","termid":"PBO:0017527"}


id: PBO:0029786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_with_abnormal_cell_shape","termid":"PBO:0029786"}


id: PBO:0043941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cone-rod homeobox","termid":"PBO:0043941"}


id: GO:0006296
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The endonucleolytic cleavage of the damaged strand of DNA 5' to the site of damage. The incision occurs at the junction of single-stranded DNA and double-stranded DNA that is formed when the DNA duplex is unwound. The incision follows the incision formed 3' to the site of damage.","definition_xrefs":["PMID:10197977","GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleotide-excision repair, DNA incision, 5'-to lesion (obsolete GO:0006296)","synonyms":[{"name":"nucleotide-excision repair, DNA incision, 5' to lesion","type":"exact"}],"termid":"GO:0006296"}


id: PBO:0071335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L27 pseudogene 12","termid":"PBO:0071335"}


id: PR:Q9URU4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pfl5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URU4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell agglutination protein C1289.15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.15","synonyms":[{"name":"Spom972h-pfl5","type":"exact"}],"termid":"PR:Q9URU4"}


id: PBO:0080739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing transcription regulator 1","termid":"PBO:0080739"}


id: MONDO:0006809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blocking of a blood vessel in the skull by an embolus which can be a blood clot (thrombus) or other undissolved material in the blood stream. Most emboli are of cardiac origin and are associated with heart diseases. Other non-cardiac sources of emboli are usually associated with vascular diseases.","definition_xrefs":["MESH:D020766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial embolism","secondary_identifiers":["ICD9:434.1","UMLS:C0752140","SCTID:75543006","MEDGEN:155710","EFO:1000991","ICD9:434.10","DOID:4372"],"synonyms":[{"name":"cerebral embolism","type":"exact"},{"name":"cerebral embolism with cerebral infarction","type":"exact"}],"termid":"MONDO:0006809","xrefs":{"Monarch":{"xref_id":"0006809"}}}


id: GO:0032905
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of transforming growth factor-beta1 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transforming growth factor beta production","termid":"GO:0071604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transforming growth factor beta1 production","synonyms":[{"name":"TGF-B1 production","type":"exact"},{"name":"TGFB1 production","type":"exact"},{"name":"transforming growth factor-beta1 production","type":"exact"}],"termid":"GO:0032905"}


id: MONDO:0008471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chondrodysplasia characterized by disproportionate short stature, abnormal epiphyses and flattened vertebral bodies.","definition_xrefs":["Orphanet:94068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 collagenopathy","termid":"MONDO:0022800"},{"relation_name":"is_a","term_name":"COL2A1-related spondyloepiphyseal dysplasia","termid":"MONDO:0100602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia congenita","secondary_identifiers":["GARD:4987","ICD9:756.9","UMLS:C2745959","MESH:C535788","SCTID:278713008","NANDO:2201348","MEDGEN:412530","DOID:14789","OMIM:183900","ICD10CM:Q77.7","MedDRA:10062920","NORD:1733"],"synonyms":[{"name":"SED congenita","type":"exact"},{"name":"SEDC","type":"exact"},{"name":"Spondyloepiphyseal Dysplasia, Congenital","type":"exact"},{"name":"Spranger-Wiedemann disease","type":"exact"},{"name":"congenital spondyloepiphyseal dysplasia","type":"related"},{"name":"spondyloepiphyseal dysplasia congenita","type":"exact"},{"name":"spondyloepiphyseal dysplasia, congenital type","type":"exact"}],"termid":"MONDO:0008471","xrefs":{"Monarch":{"xref_id":"0008471"}}}


id: MONDO:0020739
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypercalcemia, infantile","termid":"MONDO:0000212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"hypercalcemia, infantile, 1","secondary_identifiers":["MEDGEN:934200","OMIM:143880","UMLS:C4310232","GARD:18434"],"synonyms":[{"name":"HCINF1","type":"exact"},{"name":"autosomal recessive infantile hypercalcemia 1","type":"exact"},{"name":"hypercalcemia, infantile, 1","type":"exact"}],"termid":"MONDO:0020739","xrefs":{"Monarch":{"xref_id":"0020739"}}}


id: GO:0035973
data:
  {"annotated_genes":["SJAG_01283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78962],"is_not":false,"summary":null,"term":"GO:0035973"}]},"cv_name":"biological_process","definition":"The selective degradation of protein aggregates by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:25062811","PMID:18508269","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01283":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"aggrephagy","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0035972","Reactome:R-HSA-9646399"],"termid":"GO:0035973","terms_by_termid":{"GO:0035973":null}}


id: GO:0033211
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by adiponectin binding to its receptor on the surface of a cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:20536390","GOC:signaling","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adiponectin-activated signaling pathway","synonyms":[{"name":"adipocytokine signaling pathway","type":"related"},{"name":"adiponectin-mediated signaling pathway","type":"related"},{"name":"adiponectin-mediated signalling pathway","type":"exact"}],"termid":"GO:0033211"}


id: PR:Q10260
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC56F8.12 gene.","definition_xrefs":["UniProtKB:Q10260","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C56F8.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56F8.12","synonyms":[{"name":"Spom972h-SPAC56F8.12","type":"exact"}],"termid":"PR:Q10260"}


id: PBO:0121072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EIF2S3 pseudogene 2","termid":"PBO:0121072"}


id: GO:0016240
data:
  {"annotated_genes":["SJAG_02699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96637],"is_not":false,"summary":null,"term":"GO:0016240"}]},"cv_name":"biological_process","definition":"The initial attachment of an autophagosome membrane to a target membrane, mediated by proteins protruding from the membrane of the vesicle and the target membrane. Docking requires only that the two membranes come close enough for these proteins to interact and adhere.","definition_xrefs":["GOC:mah","GOC:autophagy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle localization by membrane tethering","termid":"GO:0140056"},{"relation_name":"part_of","term_name":"autophagosome maturation","termid":"GO:0097352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140056"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0140056","GO:0008150","GO:0006914"],"is_obsolete":false,"name":"autophagosome membrane docking","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"autophagic vacuole docking","type":"exact"}],"termid":"GO:0016240","terms_by_termid":{"GO:0016240":null}}


id: MONDO:0003001
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A radiosensitive malignant germ cell tumor found in the testis (especially undescended), and extragonadal sites (anterior mediastinum and pineal gland). It is characterized by the presence of uniform cells with clear or dense cytoplasm which contains glycogen, and by a large nucleus which contains one or more nucleoli. The neoplastic germ cells form aggregates separated by fibrous septa. The fibrous septa contain chronic inflammatory cells, mainly lymphocytes.","definition_xrefs":["NCIT:C9309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"germinomatous germ cell tumor","termid":"MONDO:0020580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"seminoma","secondary_identifiers":["SCTID:443675005","ONCOTREE:SEM","ICDO:9061/3","ICD9:186.9","MEDGEN:11371","MESH:D018239","DOID:4440","UMLS:C0036631"],"synonyms":[{"name":"seminoma","type":"exact"},{"name":"seminoma, malignant","type":"exact"},{"name":"seminoma, pure","type":"exact"}],"termid":"MONDO:0003001","xrefs":{"Monarch":{"xref_id":"0003001"}}}


id: MONDO:0014100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dilated cardiomyopathy in which the cause of the disease is a mutation in the MYPN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"},{"relation_name":"is_a","term_name":"familial hypertrophic cardiomyopathy","termid":"MONDO:0024573"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1KK","secondary_identifiers":["DOID:0110445","GARD:15926","MEDGEN:811544","OMIM:615248","UMLS:C3714995"],"synonyms":[{"name":"CMD1KK","type":"exact"},{"name":"MYPN dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1KK","type":"related"},{"name":"cardiomyopathy, dilated, type 1Kk","type":"exact"},{"name":"cardiomyopathy, familial hypertrophic, 22","type":"related"},{"name":"cardiomyopathy, familial restrictive, 4","type":"related"},{"name":"cardiomyopathy, hypertrophic, 22","type":"exact"},{"name":"dilated cardiomyopathy caused by mutation in MYPN","type":"exact"},{"name":"dilated cardiomyopathy type 1KK","type":"exact"}],"termid":"MONDO:0014100","xrefs":{"Monarch":{"xref_id":"0014100"}}}


id: PBO:0034514
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_cleavage_furrow_rim","termid":"PBO:0034514"}


id: PBO:0077918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 9","termid":"PBO:0077918"}


id: PBO:0040883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 7","termid":"PBO:0040883"}


id: MONDO:0012261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 6","secondary_identifiers":["OMIM:609378","MEDGEN:324472","UMLS:C1836271"],"synonyms":[{"name":"AUTS6","type":"exact"},{"name":"autism susceptibility 6","type":"exact"},{"name":"autism, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0012261","xrefs":{"Monarch":{"xref_id":"0012261"}}}


id: GO:0103096
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dihomomethionine + 2 O2 + 2 NADPH + 2 H+ = 5-methylthiopentanaldoxime + 3 H2O + carbon dioxide + 2 NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete CYP79F1 dihomomethionine monooxygenase activity (obsolete GO:0103096)","termid":"GO:0103096"}


id: MONDO:0003836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hormonally functioning or non-functioning pituitary gland adenocarcinoma that produces thyrotropin.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TSH producing pituitary tumor","termid":"MONDO:0003837"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant thyroid stimulating hormone producing neoplasm of pituitary gland","secondary_identifiers":["MEDGEN:277341","NCIT:C5965","UMLS:C1334627","DOID:6274"],"synonyms":[{"name":"TSH producing pituitary gland carcinoma","type":"exact"},{"name":"TSH-producing pituitary gland carcinoma","type":"exact"},{"name":"malignant TSH producing neoplasm of pituitary","type":"exact"},{"name":"malignant TSH producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant TSH producing neoplasm of the pituitary","type":"exact"},{"name":"malignant TSH producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant TSH producing pituitary gland neoplasm","type":"exact"},{"name":"malignant TSH producing pituitary gland tumor","type":"exact"},{"name":"malignant TSH producing pituitary gland tumour","type":"exact"},{"name":"malignant TSH producing pituitary neoplasm","type":"exact"},{"name":"malignant TSH producing pituitary tumor","type":"exact"},{"name":"malignant TSH producing pituitary tumour","type":"exact"},{"name":"malignant TSH producing tumor of pituitary","type":"exact"},{"name":"malignant TSH producing tumor of pituitary gland","type":"exact"},{"name":"malignant TSH producing tumor of the pituitary","type":"exact"},{"name":"malignant TSH producing tumor of the pituitary gland","type":"exact"},{"name":"malignant TSH producing tumour of pituitary","type":"exact"},{"name":"malignant TSH producing tumour of pituitary gland","type":"exact"},{"name":"malignant TSH producing tumour of the pituitary","type":"exact"},{"name":"malignant TSH producing tumour of the pituitary gland","type":"exact"},{"name":"malignant TSH secreting neoplasm of pituitary","type":"exact"},{"name":"malignant TSH secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant TSH secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant TSH secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant TSH secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant TSH secreting pituitary gland tumor","type":"exact"},{"name":"malignant TSH secreting pituitary gland tumour","type":"exact"},{"name":"malignant TSH secreting pituitary neoplasm","type":"exact"},{"name":"malignant TSH secreting pituitary tumor","type":"exact"},{"name":"malignant TSH secreting pituitary tumour","type":"exact"},{"name":"malignant TSH secreting tumor of pituitary","type":"exact"},{"name":"malignant TSH secreting tumor of pituitary gland","type":"exact"},{"name":"malignant TSH secreting tumor of the pituitary","type":"exact"},{"name":"malignant TSH secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant TSH secreting tumour of pituitary","type":"exact"},{"name":"malignant TSH secreting tumour of pituitary gland","type":"exact"},{"name":"malignant TSH secreting tumour of the pituitary","type":"exact"},{"name":"malignant TSH secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant pituitary gland thyrotropinoma","type":"exact"},{"name":"malignant pituitary thyrotropinoma","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary gland neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary gland tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary gland tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone producing pituitary tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumor of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone producing tumour of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary gland tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary gland tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary neoplasm","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary tumor","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting pituitary tumour","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of pituitary gland","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of the pituitary","type":"exact"},{"name":"malignant thyroid stimulating hormone secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant thyrotropinoma","type":"exact"},{"name":"malignant thyrotropinoma of pituitary","type":"exact"},{"name":"malignant thyrotropinoma of pituitary gland","type":"exact"},{"name":"malignant thyrotropinoma of the pituitary","type":"exact"},{"name":"malignant thyrotropinoma of the pituitary gland","type":"exact"},{"name":"thyrotropin producing pituitary gland carcinoma","type":"exact"}],"termid":"MONDO:0003836","xrefs":{"Monarch":{"xref_id":"0003836"}}}


id: PBO:0049820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 11","termid":"PBO:0049820"}


id: PBO:0076618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor A pseudogene 3","termid":"PBO:0076618"}


id: PBO:0058890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10527","termid":"PBO:0058890"}


id: PBO:0039464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 13A","termid":"PBO:0039464"}


id: GO:0050747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving lipoproteins, any conjugated, water-soluble protein in which the nonprotein group consists of a lipid or lipids.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of lipoprotein metabolic process","termid":"GO:0050746"},{"relation_name":"is_a","term_name":"positive regulation of protein metabolic process","termid":"GO:0051247"},{"relation_name":"positively_regulates","term_name":"lipoprotein metabolic process","termid":"GO:0042157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lipoprotein metabolic process","synonyms":[{"name":"activation of lipoprotein metabolic process","type":"narrow"},{"name":"positive regulation of lipoprotein metabolism","type":"exact"},{"name":"stimulation of lipoprotein metabolic process","type":"narrow"},{"name":"up regulation of lipoprotein metabolic process","type":"exact"},{"name":"up-regulation of lipoprotein metabolic process","type":"exact"},{"name":"upregulation of lipoprotein metabolic process","type":"exact"}],"termid":"GO:0050747"}


id: GO:1901982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to maltose.","definition_xrefs":["GOC:TermGenie","PMID:21566157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide binding","termid":"GO:0048030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"maltose binding","termid":"GO:1901982"}


id: PBO:0071257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23 pseudogene 2","termid":"PBO:0071257"}


id: FYPO:0000445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest in mitotic G1 phase","synonyms":[{"name":"cell cycle arrest in G1 phase during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest in mitotic G1 phase during vegetative growth","type":"exact"},{"name":"mitotic G1 phase arrest","type":"exact"},{"name":"mitotic cell cycle arrest in G1 phase","type":"exact"},{"name":"mitotic cell cycle progression in G1 phase: arrested","type":"related"}],"termid":"FYPO:0000445"}


id: PBO:0050739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family E (Hsp10) member 1 pseudogene 1","termid":"PBO:0050739"}


id: GO:0042292
data:
  {"annotated_genes":["SJAG_03896"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76149],"is_not":false,"summary":null,"term":"GO:0042292"}]},"cv_name":"molecular_function","definition":"Catalysis of the activation of the small ubiquitin-related modifier URM1, through the formation of an ATP-dependent high-energy thiolester bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like modifier activating enzyme activity","termid":"GO:0008641"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"URM1 activating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0042292","terms_by_termid":{"GO:0042292":null}}


id: MONDO:0800041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any MELAS syndromein which the cause of the disease is a mutation in the MTTS2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MELAS syndrome","termid":"MONDO:0010789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"MELAS syndrome caused by mutation in MTTS2","synonyms":[{"name":"MTTS2 MELAS syndrome","type":"exact"}],"termid":"MONDO:0800041","xrefs":{"Monarch":{"xref_id":"0800041"}}}


id: MONDO:0017623
data:
  {"annotated_genes":["SJAG_02426","SJAG_04394","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88451,88449,88450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008318"}]},"cv_name":"mondo","definition":"A group of clinically heterogeneous disorders united by a germline PTEN mutation and the involvement of derivatives of all 3 germ cell layers, manifesting with hamartomas, overgrowth and neoplasia. Currently, subsets carrying clinical diagnoses of Cowden syndrome, Bannayan-Riley-Ruvalcaba syndrome, Proteus and Proteus-like syndromes and SOLAMEN syndrome belong to PHTS.","definition_xrefs":["Orphanet:306498"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02426":null,"SJAG_04206":null,"SJAG_04394":null},"genotype_count":0,"is_obsolete":false,"name":"PTEN hamartoma tumor syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C179915","MEDGEN:368366","NORD:1631","SCTID:722859001","GARD:12800","UMLS:C1959582","DOID:0080191"],"synonyms":[{"name":"PHTS","type":"exact"},{"name":"PTEN hamartoma tumor syndrome","type":"exact"}],"termid":"MONDO:0017623","terms_by_termid":{"MONDO:0008318":null},"xrefs":{"Monarch":{"xref_id":"0017623"}}}


id: PBO:0042394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD302 molecule","termid":"PBO:0042394"}


id: FYPO:0000260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which regulation of transcription during the G1/S phase of the cell cycle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulation phenotype during vegetative growth","termid":"FYPO:0001335"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"abnormal G1/S phase transcription","synonyms":[{"name":"abnormal G1/S phase transcription during mitotic cell cycle","type":"exact"},{"name":"abnormal G1/S phase transcription during vegetative growth","type":"exact"},{"name":"abnormal regulation of transcription involved in G1/S phase of mitotic cell cycle","type":"exact"},{"name":"periodic cell-cycle expression, abolished","type":"related"}],"termid":"FYPO:0000260"}


id: MONDO:1010718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dihydropyrimidinase deficiency that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydropyrimidinase deficiency, non-human animal","termid":"MONDO:1010109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydropyrimidinase deficiency, domestic cat","secondary_identifiers":["OMIA:001776-9685"],"termid":"MONDO:1010718","xrefs":{"Monarch":{"xref_id":"1010718"}}}


id: PBO:0083330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORFs TOP3/YLR234W and YLR236C","termid":"PBO:0083330"}


id: GO:0033815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3 malonyl-CoA + benzoyl-CoA = 4 CoA + 3,5-dihydroxybiphenyl + 4 CO2.","definition_xrefs":["EC:2.3.1.177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"biphenyl synthase activity","secondary_identifiers":["MetaCyc:2.3.1.177-RXN","RHEA:22292"],"synonyms":[{"name":"BIS","type":"related"},{"name":"malonyl-CoA:benzoyl-CoA malonyltransferase activity","type":"related"}],"termid":"GO:0033815"}


id: PBO:0000935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic ester hydrolase activity (predicted)","termid":"PBO:0000935"}


id: MONDO:0001090
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of anterolateral myocardial infarction.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myocardial infarction","termid":"MONDO:0004781"},{"relation_name":"is_a","term_name":"anterolateral myocardial infarction","termid":"MONDO:0006652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute anterolateral myocardial infarction","secondary_identifiers":["UMLS:C0155627","ICD9:410.0","ICD9:410.00","ICD9:410.02","SCTID:70211005","DOID:10651","ICD9:410.01","MEDGEN:510040"],"synonyms":[{"name":"acute anterolateral myocardial infarction","type":"exact"},{"name":"acute myocardial infarction of anterolateral wall","type":"exact"},{"name":"anterolateral myocardial infarction, acute","type":"exact"}],"termid":"MONDO:0001090","xrefs":{"Monarch":{"xref_id":"0001090"}}}


id: GO:0002284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an immature myeloid dendritic cell acquires the specialized features of a mature myeloid dendritic cell as part of an immune response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid dendritic cell activation involved in immune response","termid":"GO:0002277"},{"relation_name":"is_a","term_name":"myeloid dendritic cell differentiation","termid":"GO:0043011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myeloid dendritic cell differentiation involved in immune response","synonyms":[{"name":"myeloid dendritic cell differentiation during immune response","type":"related"}],"termid":"GO:0002284"}


id: PBO:0083021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deleted ORF; does not encode a protein; included in the original annotation of Chromosome III but deleted due to sequence correction","termid":"PBO:0083021"}


id: PBO:0005427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGEF Rgf3","termid":"PBO:0005427"}


id: GO:0072538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response which is associated with resistance to intracellular bacteria with a key role in inflammation and tissue injury. This immune response is associated with pathological autoimmune conditions such as multiple sclerosis, arthritis and psoriasis which is typically orchestrated by the production of particular cytokines by T-helper 17 cells, most notably interleukin-17, IL-21 and IL-22.","definition_xrefs":["GOC:ebc","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 type immune response","synonyms":[{"name":"Th17 immune response","type":"exact"}],"termid":"GO:0072538"}


id: GO:0022810
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the active transport of a solute across a membrane by a mechanism involving conformational change, where energy for active transport is derived from membrane potential if the solute is charged.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uniporter activity","termid":"GO:0015292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"membrane potential driven uniporter activity","synonyms":[{"name":"porter","type":"broad"}],"termid":"GO:0022810"}


id: PBO:0061032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NINJ2 antisense RNA 1","termid":"PBO:0061032"}


id: PBO:0017635
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lesch-Nyhan Syndrome","termid":"PBO:0017635"}


id: PBO:0049706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan synthase 1","termid":"PBO:0049706"}


id: PBO:0071476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 17","termid":"PBO:0071476"}


id: PBO:0027995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_mitotic_G1_phase","termid":"PBO:0027995"}


id: SO:0002203
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A nucleotide site from which replication initiates.","definition_xrefs":["NCBI:cf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication_start_site","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:replication_start_site","type":"exact"},{"name":"replication start site","type":"exact"}],"termid":"SO:0002203"}


id: PBO:0120285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Me3 antisense RNA 1","termid":"PBO:0120285"}


id: PATO:0001752
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A heterochronic growth quality inhering in an organism, structure, or group of organisms by virtue of the bearer's increased growth.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochronic growth","termid":"PATO:0001490"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peramorphic growth","synonyms":[{"name":"hyperplastic growth","type":"exact"}],"termid":"PATO:0001752"}


id: PBO:0003011
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.1.1.27","termid":"PBO:0003011"}


id: MONDO:0013655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the GRIN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 8","secondary_identifiers":["DOID:0070038","MEDGEN:481912","OMIM:614254","GARD:13686","UMLS:C3280282"],"synonyms":[{"name":"GRIN1 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD8","type":"exact"},{"name":"NDHMSD","type":"related"},{"name":"autosomal dominant intellectual disability 8","type":"exact"},{"name":"autosomal dominant mental retardation 8","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 8","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in GRIN1","type":"exact"},{"name":"intellectual disability, autosomal dominant 8","type":"exact"},{"name":"intellectual disability, autosomal dominant 8, formerly","type":"related"},{"name":"intellectual disability, autosomal dominant type 8","type":"exact"},{"name":"mental retardation, autosomal dominant 8","type":"related"},{"name":"mental retardation, autosomal dominant 8, formerly","type":"related"},{"name":"mental retardation, autosomal dominant type 8","type":"exact"},{"name":"neurodevelopmental disorder with or without hyperkinetic movements and seizures, autosomal dominant","type":"related"}],"termid":"MONDO:0013655","xrefs":{"Monarch":{"xref_id":"0013655"}}}


id: GO:1901686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutathione derivative.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"glutathione derivative metabolic process","termid":"GO:1901685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790"],"is_obsolete":false,"name":"glutathione derivative catabolic process","synonyms":[{"name":"glutathione derivative breakdown","type":"exact"},{"name":"glutathione derivative catabolism","type":"exact"},{"name":"glutathione derivative degradation","type":"exact"}],"termid":"GO:1901686"}


id: PBO:0090622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-ketoglutarate-dependent xanthine dioxygenase Xan1","termid":"PBO:0090622"}


id: GO:0102636
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine = 3-benzyl-3,6 -bis(cysteinylglycine)- 6-(hydroxymethyl)-diketopiperazine + 2 5-oxo-L-prolinate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-benzyl-3,6 -bis(glutathione)- 6-(hydroxymethyl)-diketopiperazine gamma-glutamylcyclotransferase activity (obsolete GO:0102636)","termid":"GO:0102636"}


id: PBO:0062723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily V member 1","termid":"PBO:0062723"}


id: GO:0019793
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of ISG15 (interferon-stimulated gene-15) from one side of the membrane to the other.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ISG15 carrier activity (obsolete GO:0019793)","synonyms":[{"name":"ISG15 carrier activity","type":"exact"},{"name":"interferon-stimulated gene-15 carrier activity","type":"narrow"}],"termid":"GO:0019793"}


id: PBO:0071873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 11","termid":"PBO:0071873"}


id: GO:1990489
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pectin, a polymer containing a backbone of alpha-1,4-linked D-galacturonic acid residues, in the absence of oxygen.","definition_xrefs":["GOC:mengo_curators","PMID:23079077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pectin catabolic process","termid":"GO:0045490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"anaerobic pectin catabolic process","synonyms":[{"name":"anaerobic pectin degradation","type":"exact"}],"termid":"GO:1990489"}


id: MONDO:0007381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epithelial recurrent erosion dystrophy (ERED) is a rare form of superficial corneal dystrophy characterized by recurrent episodes of epithelial erosions from childhood in the absence of associated diseases, with occasional impairment of vision.","definition_xrefs":["Orphanet:293381"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"epithelial recurrent erosion dystrophy","secondary_identifiers":["GARD:17338","MESH:C565155","icd11.foundation:1105690299","DOID:0070337","OMIM:122400","MEDGEN:342263","UMLS:C1852551","SCTID:715908008"],"synonyms":[{"name":"ERED","type":"exact"},{"name":"corneal erosions, recurring hereditary","type":"related"},{"name":"dystrophia Helsinglandica","type":"exact"},{"name":"dystrophia Smolandiensis","type":"exact"},{"name":"epithelial recurrent erosion dystrophy","type":"exact"},{"name":"recurrent hereditary corneal erosions","type":"exact"}],"termid":"MONDO:0007381","xrefs":{"Monarch":{"xref_id":"0007381"}}}


id: FYPO:0006714
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more free fatty acids measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular free fatty acid level","synonyms":[{"name":"increased cellular free fatty acid level during mitotic cell cycle","type":"related"},{"name":"increased cellular free fatty acid level during vegetative growth","type":"exact"},{"name":"increased free fatty acid accumulation","type":"related"}],"termid":"FYPO:0006714"}


id: MONDO:0011276
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 2","secondary_identifiers":["DOID:0080396","MEDGEN:400499","MESH:C566419","UMLS:C1864323","OMIM:602966"],"synonyms":[{"name":"OFC2","type":"exact"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 2","type":"related"},{"name":"orofacial cleft 2","type":"exact"}],"termid":"MONDO:0011276","xrefs":{"Monarch":{"xref_id":"0011276"}}}


id: PBO:0086169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for Stt4-containing PI kinase complex localization; required for Stt4-containing phosphoinositide (PI) kinase patch assembly at plasma membrane; recruited to plasma membrane via conserved basic patch near N-terminus; exhibits synthetic lethal genetic interactions with PHO85; mutations in human homolog EFR3A implicated in autism spectrum disorders","termid":"PBO:0086169"}


id: PBO:0004872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fork head transcription factor Fkh2","termid":"PBO:0004872"}


id: PBO:0071344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L29 pseudogene 2","termid":"PBO:0071344"}


id: MONDO:0010369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 5, congenital, X-linked","secondary_identifiers":["MEDGEN:375583","DOID:0111796","UMLS:C1845116","OMIM:300589"],"synonyms":[{"name":"NYS5","type":"exact"},{"name":"NYSTAGMUS 5, congenital, X-linked","type":"related"},{"name":"nystagmus 5, congenital, X-linked, X-linked dominant","type":"exact"}],"termid":"MONDO:0010369","xrefs":{"Monarch":{"xref_id":"0010369"}}}


id: PBO:0072379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27a pseudogene 5","termid":"PBO:0072379"}


id: FYPO:0002887
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the telomere of a chromosome is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during vegetative growth","termid":"FYPO:0000644"},{"relation_name":"is_a","term_name":"normal protein localization to chromosome","termid":"FYPO:0004997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to telomere during vegetative growth","synonyms":[{"name":"normal protein localisation to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localisation to telomere during vegetative growth","type":"exact"},{"name":"normal protein localization to chromosome, telomeric region, during vegetative growth","type":"exact"},{"name":"normal protein localization to telomere during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002887"}


id: MONDO:0010228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked nonsyndromic hearing loss","termid":"MONDO:0019586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, X-linked 3","secondary_identifiers":["MESH:C564727","OMIM:300030","MEDGEN:854758","UMLS:C3888089","DOID:0111736","GARD:18095"],"synonyms":[{"name":"DFNX3","type":"narrow"},{"name":"deafness X-linked, DFN3","type":"narrow"},{"name":"deafness, X-linked 3","type":"narrow"},{"name":"deafness, X-linked 4, congenital sensorineural","type":"narrow"}],"termid":"MONDO:0010228","xrefs":{"Monarch":{"xref_id":"0010228"}}}


id: PBO:0000164
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expressed with adjacent gene","termid":"PBO:0000164"}


id: PBO:0089117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-associated lipid droplet biogenesis protein, seipin Sei1","termid":"PBO:0089117"}


id: GO:0005766
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A lysosome before it has fused with a vesicle or vacuole.","definition_xrefs":["GOC:jl","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"primary lysosome","secondary_identifiers":["NIF_Subcellular:sao1140587416"],"termid":"GO:0005766"}


id: GO:0046202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cyanide, NC-, the anion of hydrocyanic acid. Cyanide is a potent inhibitor of respiration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"cyanide metabolic process","termid":"GO:0019499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanide biosynthetic process","synonyms":[{"name":"cyanide anabolism","type":"exact"},{"name":"cyanide biosynthesis","type":"exact"},{"name":"cyanide formation","type":"exact"},{"name":"cyanide synthesis","type":"exact"}],"termid":"GO:0046202"}


id: PBO:0072148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 25","termid":"PBO:0072148"}


id: PBO:0119293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-3-methoxy-5-polyprenylbenzoate decarboxylase Coq4","termid":"PBO:0119293"}


id: PBO:0001779
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disruption of interaction between Cdc27 and Pcn1 makes Cdc24-Dna2 complex dispensible","termid":"PBO:0001779"}


id: PBO:0051243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-62-1 (pseudogene)","termid":"PBO:0051243"}


id: PBO:0077594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane serine protease 5","termid":"PBO:0077594"}


id: GO:0045837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment or extent of a membrane potential, the electric potential existing across any membrane arising from charges in the membrane itself and from the charges present in the media on either side of the membrane.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane potential","synonyms":[{"name":"down regulation of membrane potential","type":"exact"},{"name":"down-regulation of membrane potential","type":"exact"},{"name":"downregulation of membrane potential","type":"exact"},{"name":"inhibition of membrane potential","type":"narrow"},{"name":"reduction of membrane potential","type":"exact"}],"termid":"GO:0045837"}


id: GO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-alpha-D-glucosyl(n) + 1,6-alpha-D-glucosyl(m) = 1,4-alpha-D-glucosyl(n-1) + 1,6-alpha-D-glucosyl(m+1).","definition_xrefs":["MetaCyc:DEXTRIN-DEXTRANASE-RXN","EC:2.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0003674"],"is_obsolete":false,"name":"dextrin dextranase activity","secondary_identifiers":["RHEA:14625"],"synonyms":[{"name":"1,4-alpha-D-glucan:1,6-alpha-D-glucan 6-alpha-D-glucosyltransferase activity","type":"related"},{"name":"dextran dextrinase activity","type":"related"},{"name":"dextrin 6-glucosyltransferase activity","type":"related"}],"termid":"GO:0050103"}


id: MOD:00452
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a 3x(13)C-labeled propanoyl group.","definition_xrefs":["Unimod:59#N-term","PubMed:11857757","PubMed:12175151","PubMed:11999733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino propanoylated residue","termid":"MOD:00451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino 3x(13)C-labeled propanoylated residue","synonyms":[{"name":"Propionate labeling reagent heavy form (+3amu), N-term & K","type":"related"},{"name":"Propionyl:13C(3)","type":"related"}],"termid":"MOD:00452"}


id: GO:0004200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete signaling (initiator) caspase activity (obsolete GO:0004200)","synonyms":[{"name":"signaling (initiator) caspase activity","type":"exact"},{"name":"signalling (initiator) caspase activity","type":"exact"}],"termid":"GO:0004200"}


id: GO:0052334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of the cytoskeleton of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by organism of cytoskeleton of other organism involved in symbiotic interaction (obsolete GO:0052334)","synonyms":[{"name":"modification by organism of cytoskeleton of other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052334"}


id: PBO:0074167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G4","termid":"PBO:0074167"}


id: GO:0035202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of the tracheal pits, the first tube-like structures to form in the open tracheal system. Once cells are determined to their tracheal cell fate, the tracheal pits arise by invagination of each ectodermal cluster of tracheal placode cells, between 5 and 7 hours after egg laying. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:14570584","GOC:mtg_sensu","PMID:11992723","PMID:11063940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tracheal pit formation in open tracheal system","synonyms":[{"name":"tracheal placode invagination","type":"related"},{"name":"tracheal sac formation","type":"broad"}],"termid":"GO:0035202"}


id: GO:0010693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of alkaline phosphatase activity, the catalysis of the reaction: an orthophosphoric monoester + H2O = an alcohol + phosphate, with an alkaline pH optimum.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alkaline phosphatase activity","termid":"GO:0010692"},{"relation_name":"is_a","term_name":"negative regulation of phosphatase activity","termid":"GO:0010923"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of alkaline phosphatase activity","termid":"GO:0010693"}


id: PR:Q9USP8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isocitrate dehydrogenase [NAD] subunit alpha, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD] subunit 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC902.05c","secondary_identifiers":["UniProtKB:Q9USP8"],"synonyms":[{"name":"NAD(+)-specific ICDH (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IDH3A","type":"exact"},{"name":"isocitric dehydrogenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USP8"}


id: GO:1900420
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of  alcohol catabolic process within a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of catabolic process","termid":"GO:0009895"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of alcohol catabolic process","termid":"GO:1900419"},{"relation_name":"negatively_regulates","term_name":"alcohol catabolic process","termid":"GO:0046164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of alcohol catabolic process","synonyms":[{"name":"down regulation of cellular alcohol catabolic process","type":"exact"},{"name":"down-regulation of cellular alcohol catabolic process","type":"exact"},{"name":"downregulation of cellular alcohol catabolic process","type":"exact"},{"name":"inhibition of cellular alcohol catabolic process","type":"narrow"}],"termid":"GO:1900420"}


id: PBO:0113500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of ATP-binding cassette (ABC) family; targeted to vacuole via AP-3 pathway; involved in bile acid transport; negative regulator of vacuole fusion; regulates release of lumenal Ca2+ stores; similar to mammalian bile transporters; YBT1 has a paralog, VMR1, that arose from the whole genome duplication","termid":"PBO:0113500"}


id: GO:0047153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,10-methylenetetrahydrofolate + dCMP + H2O = (6S)-5,6,7,8-tetrahydrofolate + 5-hydroxymethyldeoxycytidylate.","definition_xrefs":["RHEA:11280","EC:2.1.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deoxycytidylate 5-hydroxymethyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01669","MetaCyc:2.1.2.8-RXN"],"synonyms":[{"name":"5,10-methylenetetrahydrofolate:deoxycytidylate 5-hydroxymethyltransferase activity","type":"related"},{"name":"d-cytidine 5'-monophosphate hydroxymethylase activity","type":"related"},{"name":"dCMP hydroxymethylase activity","type":"related"},{"name":"deoxyCMP hydroxymethylase activity","type":"related"},{"name":"deoxycytidylate hydroxymethylase activity","type":"related"},{"name":"deoxycytidylate hydroxymethyltransferase activity","type":"exact"},{"name":"deoxycytidylic hydroxymethylase activity","type":"related"}],"termid":"GO:0047153"}


id: PBO:0002590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein alpha subunit","termid":"PBO:0002590"}


id: GO:0045597
data:
  {"annotated_genes":["SJAG_04853","SJAG_02169","SJAG_00514","SJAG_03581","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96589,91875,97858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[104304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[92735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell differentiation","type":"narrow"},{"name":"stimulation of cell differentiation","type":"narrow"},{"name":"up regulation of cell differentiation","type":"exact"},{"name":"up-regulation of cell differentiation","type":"exact"},{"name":"upregulation of cell differentiation","type":"exact"}],"termid":"GO:0045597","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: GO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The reduction of the ascorbate free radical to a stable form.","definition_xrefs":["GOC:mtg_electron_transport","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete ascorbate stabilization (obsolete GO:0000044)","synonyms":[{"name":"ascorbate stabilization","type":"exact"},{"name":"vitamin C stabilization","type":"exact"}],"termid":"GO:0000044"}


id: PBO:0113261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peroxisomal protein of unknown function; last 10 C-terminal amino acids contains a novel PTS1 motif, both necessary and sufficient for Pex5p-dependent peroxisomal targeting; also localizes to the nucleus; PXP3 is not an essential gene","termid":"PBO:0113261"}


id: FYPO:0001256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to hypoxia is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level during cellular response to oxygen","termid":"FYPO:0001255"},{"relation_name":"is_a","term_name":"altered protein level during cellular response to hypoxia","termid":"FYPO:0001549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein level during cellular response to hypoxia","synonyms":[{"name":"increased protein accumulation during cellular response to hypoxia","type":"related"},{"name":"increased protein level during cellular response to hyperoxic stress","type":"exact"},{"name":"increased protein level during cellular response to hypoxia during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to hypoxia during vegetative growth","type":"exact"},{"name":"increased protein level during cellular response to increased oxygen tension","type":"exact"}],"termid":"FYPO:0001256"}


id: FYPO:0003631
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which U2-type prespliceosome assembly is decreased. The U2-type prespliceosome is formed by association of the 5' splice site with the U1 snRNP, while the branch point sequence is recognized by the U2 snRNP, and also contains other proteins.","definition_xrefs":["PomBase:mah","GO:1903241","GO:0071004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex assembly","termid":"FYPO:0003628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased U2-type prespliceosome assembly","synonyms":[{"name":"decreased U2-type prespliceosome assembly during mitotic cell cycle","type":"related"},{"name":"decreased U2-type prespliceosome assembly during vegetative growth","type":"exact"},{"name":"reduced U2-type prespliceosome assembly","type":"exact"}],"termid":"FYPO:0003631"}


id: PBO:0061738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurexophilin and PC-esterase domain family member 2","termid":"PBO:0061738"}


id: MONDO:0001237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma arising from the appendix. The majority of lymphomas affecting the appendix represent disease extension from the intestinal wall; primary lymphomas of the appendix are rare.","definition_xrefs":["NCIT:C5513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"appendix cancer","termid":"MONDO:0001235"},{"relation_name":"is_a","term_name":"cecum lymphoma","termid":"MONDO:0002034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"appendix lymphoma","secondary_identifiers":["UMLS:C1332328","DOID:11241","MEDGEN:231078"],"synonyms":[{"name":"appendiceal lymphoma","type":"exact"},{"name":"appendix lymphoma","type":"exact"},{"name":"lymphoma of appendix","type":"exact"},{"name":"lymphoma of the appendix","type":"exact"},{"name":"lymphoma of vermiform appendix","type":"exact"},{"name":"primary appendix lymphoma","type":"exact"},{"name":"vermiform appendix lymphoma","type":"exact"}],"termid":"MONDO:0001237","xrefs":{"Monarch":{"xref_id":"0001237"}}}


id: GO:0102936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + gypsogenate = gypsogenate-28-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gypsogenate-UDP-glucosyltransferase activity (obsolete GO:0102936)","termid":"GO:0102936"}


id: MONDO:0011622
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrolithiasis, uric acid, susceptibility to","secondary_identifiers":["OMIM:605990","UMLS:C2700426","MEDGEN:397793"],"synonyms":[{"name":"UAN","type":"related"},{"name":"nephrolithiasis, uric acid, susceptibility to","type":"exact"},{"name":"susceptibility to uric acid nephrolithiasis","type":"related"},{"name":"urolithiasis, uric acid, susceptibility to","type":"related"}],"termid":"MONDO:0011622","xrefs":{"Monarch":{"xref_id":"0011622"}}}


id: PBO:0012568
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae SEC4","termid":"PBO:0012568"}


id: PBO:0064235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C like 2","termid":"PBO:0064235"}


id: GO:0000085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle 'gap' phase which is the interval between the completion of DNA synthesis and the beginning of DNA segregation by mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G2 phase","termid":"GO:0051319"},{"relation_name":"part_of","term_name":"mitotic interphase","termid":"GO:0051329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0051329"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051329","GO:0008150"],"is_obsolete":false,"name":"mitotic G2 phase","synonyms":[{"name":"G2 phase of mitotic cell cycle","type":"exact"}],"termid":"GO:0000085"}


id: PR:Q2EEM0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q2EEM0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.12","synonyms":[{"name":"Spom972h-SPAC27E2.12","type":"exact"}],"termid":"PR:Q2EEM0"}


id: GO:0018835
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alkylphosphonic acid = R-CH3 + phosphate. Substrates include aminomethylphosphonic acid (AMPA) (forms methylamine), dimethylphosphinic acid (forms methylphosphonic acid), glyphosate (forms sarcosine) and methylphosphonic acid (forms phosphate).","definition_xrefs":["PMID:3804975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"carbon phosphorus lyase activity","secondary_identifiers":["GO:0009456","EC:4.7.1.-"],"termid":"GO:0018835"}


id: MOD:01107
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to O5-benzyl-L-glutamate.","definition_xrefs":["DeltaMass:258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O5-benzyl-L-glutamate","termid":"MOD:01107"}


id: PBO:0075017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-28","termid":"PBO:0075017"}


id: MONDO:0011639
data:
  {"annotated_genes":["SJAG_02749","SJAG_04746"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88402,88403],"is_not":false,"summary":null,"term":"MONDO:0011639"}]},"cv_name":"mondo","definition":"Any Diamond-Blackfan anemia in which the cause of the disease is a mutation in the RPS28 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Diamond-Blackfan anemia","termid":"MONDO:0015253"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02749":null,"SJAG_04746":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Diamond-Blackfan anemia 15 with mandibulofacial dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4225411","OMIM:606164","GARD:15390","MEDGEN:902755","DOID:0111894"],"synonyms":[{"name":"DBA15","type":"related"},{"name":"Diamond Blackfan anaemia 15 with mandibulofacial dysostosis","type":"exact"},{"name":"Diamond Blackfan anemia 15 with mandibulofacial dysostosis","type":"exact"},{"name":"Diamond-Blackfan anaemia caused by mutation in RPS28","type":"exact"},{"name":"Diamond-Blackfan anemia 15 with mandibulofacial dysostosis","type":"exact"},{"name":"Diamond-Blackfan anemia caused by mutation in RPS28","type":"exact"},{"name":"RPS28 Diamond-Blackfan anaemia","type":"exact"},{"name":"RPS28 Diamond-Blackfan anemia","type":"exact"}],"termid":"MONDO:0011639","terms_by_termid":{"MONDO:0011639":null},"xrefs":{"Monarch":{"xref_id":"0011639"}}}


id: PBO:0084099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanine nucleotide exchange factor specific for Arf3p; localized to the bud neck and tip; required for localization of Arf3p to the bud neck and tip","termid":"PBO:0084099"}


id: FYPO:0002971
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body is decreased during telophase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to mitotic spindle pole body during mitosis","termid":"FYPO:0002822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to mitotic spindle pole body during telophase","synonyms":[{"name":"decreased protein localisation to mitotic spindle pole body during telophase","type":"exact"},{"name":"decreased protein localization to mitotic SPB during telophase","type":"exact"},{"name":"decreased protein localization to mitotic spindle pole body during mitotic telophase","type":"exact"},{"name":"decreased protein localization to spindle pole body during telophase during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitotic spindle pole body during telophase","type":"exact"}],"termid":"FYPO:0002971"}


id: PBO:0079421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta pseudogene 4","termid":"PBO:0079421"}


id: PBO:0069835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1121, pseudogene","termid":"PBO:0069835"}


id: GO:0010127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions using mycothiol to convert an alkylating agent to an S-conjugate of mycothiol. The latter is cleaved to release mercapturic acid which is excreted from the cell.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification","termid":"GO:0098754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"mycothiol-dependent detoxification","synonyms":[{"name":"mycothiol-dependent detoxification of alkylating agent","type":"narrow"}],"termid":"GO:0010127"}


id: PR:O43042
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrpl3 gene.","definition_xrefs":["UniProtKB:O43042","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L3, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.14c","synonyms":[{"name":"Spom972h-mrpl3","type":"exact"}],"termid":"PR:O43042"}


id: PBO:0027417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth","termid":"PBO:0027417"}


id: MONDO:0020640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the brain secondary to an immune response triggered by the body itself.","definition_xrefs":["NCIT:C122414"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disorder of central nervous system","termid":"MONDO:0000568"},{"relation_name":"is_a","term_name":"encephalitis","termid":"MONDO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune encephalitis","secondary_identifiers":["NANDO:2200902","UMLS:C5671289","MEDGEN:1804547","NANDO:2100248","GARD:11979","icd11.foundation:241281019","Orphanet:622014","SCTID:95643007"],"synonyms":[{"name":"autoimmune encephalitis","type":"exact"}],"termid":"MONDO:0020640","xrefs":{"Monarch":{"xref_id":"0020640"}}}


id: FYPO:0004797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is normal (i.e. indistinguishable from wild type) during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PomBase:mah","PMID:25891897","PMID:22558440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis I","termid":"FYPO:0003563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal azygotic meiosis I","synonyms":[{"name":"normal azygotic first meiotic nuclear division","type":"exact"},{"name":"normal meiosis I during azygotic meiosis","type":"exact"}],"termid":"FYPO:0004797"}


id: PBO:0028337
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_spatial_extent_of_CENP-A_containing_nucleosome_assembly","termid":"PBO:0028337"}


id: GO:0016601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An intracellular signaling cassette in which a small monomeric GTPase of the Rac subfamily relays a signal.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Rac protein signal transduction","secondary_identifiers":["Reactome:R-HSA-428540"],"synonyms":[{"name":"Rac mediated signal transduction","type":"exact"}],"termid":"GO:0016601"}


id: SO:0002130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that contains a CDS but has no stop codon before the polyA site is reached.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSD_transcript","synonyms":[{"name":"non_stop_decay_transcript","type":"exact"}],"termid":"SO:0002130"}


id: PBO:0028190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_branched,_elongated,_multiseptate_vegetative_cell","termid":"PBO:0028190"}


id: PBO:0088133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein of unknown function; member of the multidrug resistance family; YCR023C is not an essential gene","termid":"PBO:0088133"}


id: GO:0140327
data:
  {"annotated_genes":["SJAG_05209","SJAG_02516","SJAG_03050","SJAG_01731","SJAG_02897","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76704,74315],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015247"},{"annotations":[96438,99940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140351"},{"annotations":[101489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180013"},{"annotations":[99942,96440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140345"},{"annotations":[96442,99944,101491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090555"},{"annotations":[101492,114557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of lipids from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["PMID:25284293","PMID:20043909","Wikipedia:Flippase"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled intramembrane lipid transporter activity","termid":"GO:0140326"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01731":null,"SJAG_01945":null,"SJAG_02516":null,"SJAG_02897":null,"SJAG_03050":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0140303","GO:0005215"],"is_obsolete":false,"name":"flippase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"flippase activity (exoplasmic to cytosolic leaflet)","type":"exact"}],"termid":"GO:0140327","terms_by_termid":{"GO:0015247":null,"GO:0090555":null,"GO:0140345":null,"GO:0140346":null,"GO:0140351":null,"GO:0180013":null}}


id: PBO:0030351
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_kinetochore_during_vegetative_growth","termid":"PBO:0030351"}


id: MOD:00586
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:264"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation to pyridyl thiol","synonyms":[{"name":"PET","type":"related"},{"name":"phosphorylation to pyridyl thiol","type":"related"}],"termid":"MOD:00586"}


id: MOD:00643
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Artifact","definition_xrefs":["Unimod:337","PubMed:11968134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylamine Michael addition derivatized residue","synonyms":[{"name":"Methylamine","type":"related"},{"name":"Michael addition with methylamine","type":"related"}],"termid":"MOD:00643"}


id: MONDO:0000858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"colonic disorder","termid":"MONDO:0003409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neuronal intestinal dysplasia","secondary_identifiers":["ICD9:751.5","DOID:0080072","SCTID:253783001","UMLS:C0345244","MEDGEN:576840"],"termid":"MONDO:0000858","xrefs":{"Monarch":{"xref_id":"0000858"}}}


id: GO:0072225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric late distal convoluted tubule over time, from its formation to the mature structure. The metanephric late distal convoluted tubule contains metanephric DCT cells and intercalated (IC) alpha and beta cells and is vasopressin-sensitive.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late distal convoluted tubule development","termid":"GO:0072068"},{"relation_name":"is_a","term_name":"metanephric nephron epithelium development","termid":"GO:0072243"},{"relation_name":"part_of","term_name":"metanephric distal convoluted tubule development","termid":"GO:0072221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric late distal convoluted tubule development","termid":"GO:0072225"}


id: PBO:0040333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 1 pseudogene 8","termid":"PBO:0040333"}


id: GO:0097444
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialization of the endomembrane system found in some classes of dendritic spines consisting of two or more closely apposed lamellae with interspersed electron dense material. The endomembrane component is continuous with the smooth endoplasmic reticulum.","definition_xrefs":["PMID:20400711","NIF_Subcellular:sao725931194","PMID:8987748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-bounded organelle","termid":"GO:0043227"},{"relation_name":"part_of","term_name":"endomembrane system","termid":"GO:0012505"},{"relation_name":"part_of","term_name":"dendritic spine","termid":"GO:0043197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"spine apparatus","synonyms":[{"name":"dense material","type":"narrow"}],"termid":"GO:0097444"}


id: PBO:0077361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 101","termid":"PBO:0077361"}


id: MONDO:0021452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the cornea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cornea neoplasm","termid":"MONDO:0021238"},{"relation_name":"is_a","term_name":"benign neoplasm of eye","termid":"MONDO:0021454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"benign neoplasm of cornea","secondary_identifiers":["SCTID:92070006","MEDGEN:57579","UMLS:C0154026","ICD10CM:D31.1","ICD9:224.4","NCIT:C3623","icd11.foundation:568257604"],"synonyms":[{"name":"benign cornea neoplasm","type":"exact"},{"name":"benign cornea tumor","type":"exact"},{"name":"benign cornea tumour","type":"exact"},{"name":"benign corneal neoplasm","type":"exact"},{"name":"benign corneal tumor","type":"exact"},{"name":"benign corneal tumour","type":"exact"},{"name":"benign neoplasm of the cornea","type":"exact"},{"name":"benign tumor of cornea","type":"exact"},{"name":"benign tumor of the cornea","type":"exact"},{"name":"benign tumour of cornea","type":"exact"},{"name":"benign tumour of the cornea","type":"exact"},{"name":"cornea benign neoplasm","type":"exact"}],"termid":"MONDO:0021452","xrefs":{"Monarch":{"xref_id":"0021452"}}}


id: MONDO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"is_a","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"9q33.3q34.11 microdeletion syndrome","secondary_identifiers":["GARD:22009","Orphanet:495818","UMLS:C5680085","MEDGEN:1811810"],"synonyms":[{"name":"9q33.3-q34.11 microdeletion syndrome","type":"exact"},{"name":"Del(9)(q33.3q34.11)","type":"exact"},{"name":"deletion 9q33.3q34.11","type":"exact"},{"name":"monosomy 9q33.3-q34.11","type":"exact"},{"name":"monosomy 9q33.3q34.11","type":"exact"}],"termid":"MONDO:0044641","xrefs":{"Monarch":{"xref_id":"0044641"}}}


id: MONDO:0850130
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"gastroesophageal adenocarcinoma","secondary_identifiers":["DOID:0080375"],"termid":"MONDO:0850130","xrefs":{"Monarch":{"xref_id":"0850130"}}}


id: MONDO:0004729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders affecting the motor function of the upper esophageal sphincter; lower esophageal sphincter; the esophagus body, or a combination of these parts. The failure of the sphincters to maintain a tonic pressure may result in gastric reflux of food and acid into the esophagus (gastroesophageal reflux). Other disorders include hypermotility (spastic disorders) and markedly increased amplitude in contraction (nutcracker esophagus).","definition_xrefs":["MESH:D015154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"dyskinesia of esophagus","secondary_identifiers":["ICD10CM:K22.4","MEDGEN:41868","UMLS:C0014858","DOID:9192","ICD9:530.5","SCTID:266434009"],"synonyms":[{"name":"dyskinesia of esophagus","type":"exact"},{"name":"esophageal dysmotility","type":"exact"},{"name":"esophageal motility disorder","type":"exact"},{"name":"oesophageal dysmotility","type":"exact"},{"name":"oesophageal motor disorder","type":"exact"}],"termid":"MONDO:0004729","xrefs":{"Monarch":{"xref_id":"0004729"}}}


id: MOD:00503
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-(cis-delta 5)-tetradecaenoylglycine.","definition_xrefs":["PubMed:11955008","RESID:AA0059#var","PubMed:6436247","PubMed:1326520","Unimod:134#G","OMSSA:78","PubMed:7543369","PubMed:11955007","PubMed:1386601"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(cis-delta 5)-tetradecaenoylglycine","synonyms":[{"name":"(cis-delta 5)-tetradecaenoyl","type":"related"},{"name":"Myristoleyl","type":"related"},{"name":"N-(C14:1 aliphatic acyl)glycine","type":"exact"},{"name":"myristoleylation (one double bond)","type":"exact"},{"name":"ntermpepmyristoyeylationg","type":"exact"}],"termid":"MOD:00503"}


id: FYPO:0007957
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which microtubule rescue (the transition from shrinkage to growth) is abnormal. The frequency of rescues as well as the organisation can be affected.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule dynamics during vegetative growth","termid":"FYPO:0000901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"abnormal microtubule rescue","termid":"FYPO:0007957"}


id: GO:7770009
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholate + L-tryptophan = L-tryptophocholate + H2O.","definition_xrefs":["PMID:40446798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid conjugated cholate hydrolase activity","termid":"GO:7770003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016810"],"is_obsolete":false,"name":"L-tryptophan conjugated cholate hydrolase activity","secondary_identifiers":["CHEBI:234456"],"termid":"GO:7770009"}


id: MONDO:0008781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A juvenile amyotrophic lateral sclerosis that is slowly progressive with concomitantly progressive dementia.","definition_xrefs":["DOID:0110067","PMID:5692341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile amyotrophic lateral sclerosis","termid":"MONDO:0017593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"juvenile amyotrophic lateral sclerosis with dementia","secondary_identifiers":["MESH:C565956","OMIM:205200","UMLS:C1859806","MEDGEN:395347"],"synonyms":[{"name":"ALS-dementia Complex","type":"related"},{"name":"ALS-dementia complex","type":"exact"},{"name":"amyotrophic lateral sclerosis, juvenile, with dementia","type":"related"}],"termid":"MONDO:0008781","xrefs":{"Monarch":{"xref_id":"0008781"}}}


id: GO:0016174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD(P)H + H+ + O2 = NAD(P)+ + hydrogen peroxide.","definition_xrefs":["PMID:10601291","EC:1.6.3.1","PMID:10401672","PMID:11822874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor","termid":"GO:0050664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NAD(P)H oxidase H2O2-forming activity","secondary_identifiers":["Reactome:R-HSA-5693681","Reactome:R-HSA-9698758"],"synonyms":[{"name":"NAD(P)H oxidase activity","type":"broad"},{"name":"NAD(P)H:oxygen oxidoreductase activity","type":"related"},{"name":"NADPH oxidase","type":"broad"},{"name":"THOX2 activity","type":"narrow"},{"name":"ThOX activity","type":"narrow"},{"name":"dual oxidase activity","type":"related"},{"name":"p138tox","type":"related"},{"name":"thyroid NADPH oxidase activity","type":"narrow"},{"name":"thyroid oxidase 2 activity","type":"narrow"},{"name":"thyroid oxidase activity","type":"narrow"}],"termid":"GO:0016174"}


id: GO:0051057
data:
  {"annotated_genes":["SJAG_00082","SJAG_01805","SJAG_04776","SJAG_03048","SJAG_03936"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112576,92012,104402,95819,89537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of small GTPase mediated signal transduction.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of small GTPase mediated signal transduction","termid":"GO:0051056"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"small GTPase-mediated signal transduction","termid":"GO:0007264"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03936":null,"SJAG_04776":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of small GTPase mediated signal transduction","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of small GTPase mediated signal transduction","type":"narrow"},{"name":"positive regulation of small GTPase-mediated signal transduction","type":"exact"},{"name":"stimulation of small GTPase mediated signal transduction","type":"narrow"},{"name":"up regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"up-regulation of small GTPase mediated signal transduction","type":"exact"},{"name":"upregulation of small GTPase mediated signal transduction","type":"exact"}],"termid":"GO:0051057","terms_by_termid":{"GO:0031031":null}}


id: PBO:0114296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double strand break localizing protein Dbl1, implicated in DNA repair","termid":"PBO:0114296"}


id: PBO:0042364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD163 molecule","termid":"PBO:0042364"}


id: PBO:0001639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1212 family protein","termid":"PBO:0001639"}


id: GO:1990576
data:
  {"annotated_genes":["SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117596],"is_not":false,"summary":null,"term":"GO:1990576"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular glucose molecule and transmitting the signal across the membrane by activating an associated G-protein; promotes the exchange of GDP for GTP on the alpha subunit of a heterotrimeric G-protein complex.","definition_xrefs":["PMID:15667320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01699":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled glucose receptor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"G-protein coupled glucose receptor activity","type":"exact"}],"termid":"GO:1990576","terms_by_termid":{"GO:1990576":null}}


id: PBO:0114475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tandem fusion lysine methyltransferase/ citidine deaminase involved in riboflavin biosynthesis","termid":"PBO:0114475"}


id: GO:0035340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the purine ribonucleoside inosine, also known as hypoxanthine riboside, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:19135251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside transport","termid":"GO:0015858"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"inosine transport","synonyms":[{"name":"hypoxanthine riboside transport","type":"exact"}],"termid":"GO:0035340"}


id: PBO:0038960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenosine kinase","termid":"PBO:0038960"}


id: GO:0050178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: keto-phenylpyruvate = enol-phenylpyruvate.","definition_xrefs":["RHEA:17097"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phenylpyruvate tautomerase activity","secondary_identifiers":["EC:5.3.2.1","MetaCyc:PHENYLPYRUVATE-TAUTOMERASE-RXN"],"synonyms":[{"name":"phenylpyruvate keto--enol tautomerase activity","type":"exact"},{"name":"phenylpyruvate keto-enol-isomerase activity","type":"exact"},{"name":"phenylpyruvic keto--enol isomerase activity","type":"exact"}],"termid":"GO:0050178"}


id: PBO:0003971
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab Escort Protein","termid":"PBO:0003971"}


id: PBO:0077486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 205","termid":"PBO:0077486"}


id: MONDO:0011555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome is characterized by the association of proximal fusion of the radius and ulna with congenital amegakaryocytic thrombocytopaenia. Less than 10 cases have been reported in the literature so far. The syndrome is transmitted as an autosomal dominant trait and is caused by mutations in the HOXA11 gene (7p15).","definition_xrefs":["Orphanet:71289"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"syndromic constitutional thrombocytopenia","termid":"MONDO:0018795"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005570"],"is_obsolete":false,"name":"radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome","secondary_identifiers":["OMIMPS:605432","SCTID:721882001","UMLS:C1854273","MEDGEN:340183","GARD:16687","MESH:C565328","NANDO:2200660"],"synonyms":[{"name":"ATRUS syndrome","type":"exact"},{"name":"RUSAT","type":"related"},{"name":"radioulnar synostosis with amegakaryocytic thrombocytopenia","type":"related"}],"termid":"MONDO:0011555","xrefs":{"Monarch":{"xref_id":"0011555"}}}


id: MONDO:0013697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 29","secondary_identifiers":["DOID:0081192","MEDGEN:482155","OMIM:614333","GARD:22554","UMLS:C3280525"],"synonyms":[{"name":"MRT29","type":"exact"},{"name":"intellectual disability, autosomal recessive 29","type":"exact"},{"name":"mental retardation, autosomal recessive 29","type":"related"}],"termid":"MONDO:0013697","xrefs":{"Monarch":{"xref_id":"0013697"}}}


id: PBO:0044946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 1","termid":"PBO:0044946"}


id: GO:0071981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from diapause","termid":"GO:0071981"}


id: GO:0019314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving D-allose, the D-enantiomer of allo-hexose, an aldohexose similar to glucose.","definition_xrefs":["GOC:jsg","GOC:ai","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete D-allose metabolic process (obsolete GO:0019314)","synonyms":[{"name":"D-allose metabolism","type":"exact"}],"termid":"GO:0019314"}


id: MONDO:0016707
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Astroblastoma is a very rare glial neoplasm of the central nervous system, most often with an intra-axial peripheral supratentorial location in one hemisphere of the frontal or parietal lobes and usually presenting in infants and young adults with symptoms of vomiting, loss of consciousness, epileptic seizures and headaches.","definition_xrefs":["Orphanet:251679"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"astrocytoma (excluding glioblastoma)","termid":"MONDO:0019781"},{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astroblastoma","secondary_identifiers":["ICDO:9430/3","icd11.foundation:2011571705","icd11.foundation:96344074","ONCOTREE:ASTB","DOID:7305","GARD:10635","NCIT:C4324","UMLS:C0334587","MEDGEN:90811"],"synonyms":[{"name":"AstB","type":"related"},{"name":"astroblastoma","type":"exact"},{"name":"astroblastoma (morphologic abnormality)","type":"exact"},{"name":"cerebral astroblastoma","type":"related"}],"termid":"MONDO:0016707","xrefs":{"Monarch":{"xref_id":"0016707"}}}


id: MONDO:0023089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical term that refers to the presence of a red flat and well defined lesion on the oral mucosa that is not caused by trauma, vascular, or inflammatory processes. It is a precancerous condition and is seen more commonly in middle aged or older males. It is associated with tobacco and alcohol consumption. Microscopic examination reveals severe epithelial dysplasia, carcinoma in situ, or invasive squamous cell carcinoma.","definition_xrefs":["NCIT:C3025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erythroplakia","secondary_identifiers":["MEDGEN:41862","UMLS:C0014818"],"synonyms":[{"name":"erythroplakia","type":"exact"}],"termid":"MONDO:0023089","xrefs":{"Monarch":{"xref_id":"0023089"}}}


id: MOD:00407
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a carboxyl group with a carboxy methyl ester group. OBSOLETE because Unimod:14 merged with entry 34, remap to MOD:00599.","definition_xrefs":["PubMed:18688235"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:00407 residue methyl ester (obsolete MOD:00407)","synonyms":[{"name":"ResOMe","type":"exact"}],"termid":"MOD:00407"}


id: PBO:0031151
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_papulacandin_B","termid":"PBO:0031151"}


id: PBO:0088427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic cortical anchoring factor for dynein Mcp5/Num1","termid":"PBO:0088427"}


id: PBO:0029841
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_maintenance_of_protein_localization_to_heterochromatin_at_centromere_outer_repeat","termid":"PBO:0029841"}


id: PBO:0038906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E1","termid":"PBO:0038906"}


id: GO:0102267
data:
  {"annotated_genes":["SJAG_01041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61437],"is_not":false,"summary":null,"term":"GO:0102267"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil20b in tRNA + NAD(P) = H+ + a uracil20b in tRNA + NAD(P)H.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01041":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140101","GO:0140098","GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tRNA-dihydrouridine20b synthase activity","references_by_uniquename":{"GO_REF:0000117":null},"secondary_identifiers":["MetaCyc:RXN-12476"],"termid":"GO:0102267","terms_by_termid":{"GO:0102267":null}}


id: GO:0015259
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete glutamate channel activity (obsolete GO:0015259)","synonyms":[{"name":"glutamate channel activity","type":"exact"}],"termid":"GO:0015259"}


id: MONDO:0968978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aplasia cutis-enamel dysplasia syndrome","secondary_identifiers":["MEDGEN:1854704","OMIM:620789","UMLS:C5935608"],"termid":"MONDO:0968978","xrefs":{"Monarch":{"xref_id":"0968978"}}}


id: FYPO:0009085
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of higher concentrations of lithium chloride and sodium dodecyl sulfate than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to lithium chloride and sodium dodecyl sulfate","synonyms":[{"name":"resistance to lithium chloride and SDS","type":"exact"},{"name":"resistance to lithium chloride and SDS during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and SDS in combination","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"resistance to lithium chloride and sodium dodecyl sulfate in combination","type":"exact"},{"name":"resistant to lithium chloride and SDS","type":"exact"},{"name":"resistant to lithium chloride and sodium dodecyl sulfate","type":"exact"}],"termid":"FYPO:0009085"}


id: PBO:0040173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASNS pseudogene 4","termid":"PBO:0040173"}


id: MONDO:0100119
data:
  {"annotated_genes":["SJAG_00845","SJAG_02878"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89155,89156],"is_not":false,"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Knobloch syndrome","termid":"MONDO:0800166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Knobloch syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1812153","OMIM:618458","UMLS:C5676897"],"termid":"MONDO:0100119","terms_by_termid":{"MONDO:0100119":null},"xrefs":{"Monarch":{"xref_id":"0100119"}}}


id: FYPO:0001844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ansamitocin P-3. Cells stop growing (and may die) at a concentration of ansamitocin P-3 that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002683","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to ansamitocin P-3","synonyms":[{"name":"hypersensitive to ansamitocin P-3","type":"exact"},{"name":"sensitive to ansamitocin P-3 during mitotic cell cycle","type":"related"},{"name":"sensitive to ansamitocin P-3 during vegetative growth","type":"exact"}],"termid":"FYPO:0001844"}


id: PBO:0046224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 17","termid":"PBO:0046224"}


id: GO:1905568
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferrichrome biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:al","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of siderophore biosynthetic process","termid":"GO:1900704"},{"relation_name":"regulates","term_name":"ferrichrome biosynthetic process","termid":"GO:0031169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of ferrichrome biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of ferrichrome anabolism","type":"exact"},{"name":"regulation of ferrichrome biosynthesis","type":"exact"},{"name":"regulation of ferrichrome biosynthetic process, peptide formation","type":"narrow"},{"name":"regulation of ferrichrome biosynthetic process, peptide modification","type":"narrow"},{"name":"regulation of ferrichrome formation","type":"exact"},{"name":"regulation of ferrichrome synthesis","type":"exact"}],"termid":"GO:1905568","terms_by_termid":{"GO:1905569":null}}


id: MONDO:0030048
data:
  {"annotated_genes":["SJAG_04944"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87393],"is_not":false,"summary":null,"term":"MONDO:0030048"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"CPOX-related hereditary coproporphyria","termid":"MONDO:0800180"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04944":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0019142","MONDO:0005066"],"is_obsolete":false,"name":"harderoporphyria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C562816","OMIM:618892","Orphanet:659672","UMLS:C0342859","icd11.foundation:1664486132","MEDGEN:137981"],"synonyms":[{"name":"HARDEROPORPHYRIA","type":"exact"},{"name":"HARPO","type":"exact"},{"name":"harderoporphyria","type":"exact"}],"termid":"MONDO:0030048","terms_by_termid":{"MONDO:0030048":null},"xrefs":{"Monarch":{"xref_id":"0030048"}}}


id: GO:0005142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an interleukin-11 receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"interleukin-11 receptor binding","synonyms":[{"name":"IL-11","type":"narrow"},{"name":"interleukin-11 receptor ligand","type":"narrow"}],"termid":"GO:0005142"}


id: MONDO:0034976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acquired Creutzfeldt-Jakob disease","termid":"MONDO:0018686"},{"relation_name":"is_a","term_name":"nosocomial infection","termid":"MONDO:0043544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic Creutzfeldt-Jakob disease","secondary_identifiers":["NANDO:1200193","Orphanet:576379","MEDGEN:908476","icd11.foundation:437591130","GARD:22329","UMLS:C2349757"],"termid":"MONDO:0034976","xrefs":{"Monarch":{"xref_id":"0034976"}}}


id: PBO:0090558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS complex N(6)-L-threonylcarbamoyladenine synthase subunit","termid":"PBO:0090558"}


id: FYPO:0007035
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing 5-fluorouracil.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on 5-fluorouracil","synonyms":[{"name":"normal cell population growth in presence of 5-fluorouracil","type":"exact"},{"name":"normal cell population growth on 5-FU","type":"exact"},{"name":"normal cell population growth on 5-fluorouracil","type":"exact"},{"name":"normal vegetative cell population growth on 5-fluorouracil","type":"exact"}],"termid":"FYPO:0007035"}


id: PBO:0110064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RQT complex subunit Rqt4","termid":"PBO:0110064"}


id: GO:0033632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion","termid":"GO:0022407"},{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033632"}


id: PBO:0030164
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_trehalose_level_during_sporulation","termid":"PBO:0030164"}


id: MONDO:0004952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heterogeneous group of malignant lymphoid neoplasms of B-cell origin characterized histologically by the presence of Hodgkin and Reed-Sternberg (HRS) cells in the vast majority of cases. There are two distinct subtypes: nodular lymphocyte predominant Hodgkin lymphoma and classical Hodgkin lymphoma. Hodgkin lymphoma involves primarily lymph nodes.","definition_xrefs":["NCIT:C9357","Orphanet:98293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated lymphoproliferative disorder","termid":"MONDO:0017343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Hodgkins lymphoma","secondary_identifiers":["icd11.foundation:1528863768","ICDO:9650/3","ICD9:201.9","NORD:1246","GARD:2714","DOID:8567","EFO:0000183","ICD9:201","MESH:D006689","NANDO:2200024","ICD9:201.2","ICD9:201.0","ICD9:201.1","ICD10CM:C81","ONCOTREE:HL","ICD9:201.90"],"synonyms":[{"name":"HL","type":"exact"},{"name":"Hodgkin disease","type":"exact"},{"name":"Hodgkin lymphoma","type":"exact"},{"name":"Hodgkin's Disease","type":"exact"},{"name":"Hodgkin's disease","type":"exact"},{"name":"Hodgkin's lymphoma","type":"exact"},{"name":"Hodgkin's sarcoma","type":"related"},{"name":"Hodgkins lymphoma","type":"exact"},{"name":"lymphoma, Hodgkin's","type":"related"},{"name":"stage I subdiaphragmatic Hodgkin lymphoma","type":"narrow"},{"name":"stage II subdiaphragmatic Hodgkin lymphoma","type":"narrow"}],"termid":"MONDO:0004952","xrefs":{"Monarch":{"xref_id":"0004952"}}}


id: MONDO:0016279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Adenosarcoma of the cervix uteri is a rare subtype of malignant mixed epithelial and mesenchymal tumor composed of benign or mildly atypical glandular elements and a surrounding low-grade malignant stroma, often containing heterologous elements, such as areas of sex-cord-like or smooth muscle differentiation. It usually presents with vaginal bleeding or discharge, lower abdominal pain and/or a cervical mass or polyp. The tumor may arise from pre-existing endometriosis and patients may have a history of recurrent cervical polyps.","definition_xrefs":["Orphanet:213792"],"gene_count":0,"genotype_count":0,"name":"obsolete adenosarcoma of the cervix uteri (obsolete MONDO:0016279)","termid":"MONDO:0016279","xrefs":{"Monarch":{"xref_id":"0016279"}}}


id: PBO:0064497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit A","termid":"PBO:0064497"}


id: MONDO:0100056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare disorder in which anaphylaxis occurs in association with physical activity.","definition_xrefs":["GARD:0006392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphylaxis","termid":"MONDO:0100053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"exercise-induced anaphylaxis","secondary_identifiers":["icd11.foundation:1069179856","MEDGEN:576137","UMLS:C0344183"],"synonyms":[{"name":"EIAn","type":"exact"}],"termid":"MONDO:0100056","xrefs":{"Monarch":{"xref_id":"0100056"}}}


id: GO:0120099
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a chaperone or scaffold for centriolar proteins during the maturation of the procentriole. Some of its members may become integrated into the growing centriole. Examples are the CPAP(CENPJ)-STIL complex, CEP192-PLK4 complex or CEP152-PLK4 complex in vertebrates.","definition_xrefs":["PMID:22020124","PMID:24997597","PMID:18207742","PMID:21059844","GOC:bhm","PMID:17576815"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"procentriole replication complex","termid":"GO:0120099"}


id: FYPO:0000130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0005447","FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0000002"],"is_obsolete":false,"name":"short spindle","synonyms":[{"name":"decreased spindle length","type":"exact"},{"name":"short spindles","type":"exact"},{"name":"spindle defects, short spindles","type":"exact"}],"termid":"FYPO:0000130"}


id: PBO:0047639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 1A pseudogene 2","termid":"PBO:0047639"}


id: MONDO:0019896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"Kleefstra syndrome","termid":"MONDO:0012455"},{"relation_name":"is_a","term_name":"partial monosomy of the long arm of chromosome 9","termid":"MONDO:0016908"},{"relation_name":"is_a","term_name":"Kleefstra syndrome 1","termid":"MONDO:0027407"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kleefstra syndrome due to 9q34 microdeletion","secondary_identifiers":["DECIPHER:52","GARD:16846","Orphanet:96147"],"synonyms":[{"name":"9q subtelomeric deletion syndrome","type":"exact"},{"name":"9qSTDS","type":"exact"},{"name":"Kleefstra syndrome due to 9q subtelomeric deletion","type":"exact"},{"name":"Kleefstra syndrome due to del(9)(q34)","type":"exact"},{"name":"Kleefstra syndrome due to monosomy 9q34","type":"exact"}],"termid":"MONDO:0019896","xrefs":{"Monarch":{"xref_id":"0019896"}}}


id: MONDO:0011933
data:
  {"annotated_genes":["SJAG_03056"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88864],"is_not":false,"summary":null,"term":"MONDO:0011933"},{"annotations":[87389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014543"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by iris coloboma, cataract, infantile spasms, developmental delay and abnormal coagulation factors. The disease is caused by loss-of-function mutations in the gene ALG2 (9q31.1). Transmission is autosomal recessive.","definition_xrefs":["Orphanet:79326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03056":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"ALG2-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080561","GARD:9836","OMIM:607906","MEDGEN:334618","UMLS:C1842836"],"synonyms":[{"name":"ALG2-CDG","type":"exact"},{"name":"ALG2-CDG (CDG-II)","type":"related"},{"name":"ALG2-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1I","type":"exact"},{"name":"CDG Ii","type":"exact"},{"name":"CDG syndrome type Ii","type":"exact"},{"name":"CDG1I","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ii","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1I","type":"related"},{"name":"congenital disorder of glycosylation type 1i","type":"exact"},{"name":"congenital disorder of glycosylation type Ii","type":"exact"},{"name":"congenital disorder of glycosylation, type Ii","type":"exact"},{"name":"mannosyltransferase 2 deficiency","type":"exact"}],"termid":"MONDO:0011933","terms_by_termid":{"MONDO:0011933":null,"MONDO:0014543":null},"xrefs":{"Monarch":{"xref_id":"0011933"}}}


id: GO:0005579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex produced by sequentially activated components of the complement cascade inserted into a target cell membrane and forming a pore leading to cell lysis via ion and water flow.","definition_xrefs":["GOC:add","ISBN:068340007X","ISBN:0198547684","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pore complex","termid":"GO:0046930"},{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"membrane attack complex","secondary_identifiers":["Wikipedia:Complement_membrane_attack_complex"],"synonyms":[{"name":"MAC","type":"exact"},{"name":"TCC","type":"exact"},{"name":"membrane attack complex protein alphaM chain","type":"narrow"},{"name":"membrane attack complex protein beta2 chain","type":"narrow"},{"name":"terminal complement complex","type":"exact"}],"termid":"GO:0005579"}


id: PBO:0087250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Serine-threonine protein kinase; component of a glucose-sensing system that inhibits growth in response to glucose availability; upon nutrient deprivation Yak1p phosphorylates Pop2p to regulate mRNA deadenylation, the co-repressor Crf1p to inhibit transcription of ribosomal genes, and the stress-responsive transcription factors Hsf1p and Msn2p; nuclear localization negatively regulated by the Ras/PKA signaling pathway in the presence of glucose","termid":"PBO:0087250"}


id: PR:O42861
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fft3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent helicase fft3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25A8.01c","synonyms":[{"name":"Fun thirty-related protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fft3","type":"exact"}],"termid":"PR:O42861"}


id: PBO:0042658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule 7","termid":"PBO:0042658"}


id: GO:0036438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process in which the lens is maintained in a highly refractive, transparent state to allow for optimal focusing of light on the retina.","definition_xrefs":["PMID:22095752","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue homeostasis","termid":"GO:0001894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of lens transparency","synonyms":[{"name":"maintenance of ocular lens transparency","type":"exact"},{"name":"preservation of lens transparency","type":"exact"}],"termid":"GO:0036438"}


id: PBO:0062302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 13 pseudogene","termid":"PBO:0062302"}


id: GO:0055044
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The interconnected cell membranes and intracellular regions of a plant. The interconnections occur via the plasmodesmata.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"symplast","secondary_identifiers":["Wikipedia:Symplast"],"termid":"GO:0055044"}


id: GO:0003212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the left cardiac atrium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac atrium morphogenesis","termid":"GO:0003209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac left atrium morphogenesis","termid":"GO:0003212"}


id: MONDO:0014798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any brachydactyly type A1 in which the cause of the disease is a mutation in the BMPR1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brachydactyly type A1","termid":"MONDO:0007215"},{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A1D","secondary_identifiers":["UMLS:C4225183","GARD:16164","DOID:0110978","OMIM:616849","MEDGEN:903193"],"synonyms":[{"name":"BDA1D","type":"exact"},{"name":"BMPR1B brachydactyly type A1","type":"exact"},{"name":"brachydactyly type A1 caused by mutation in BMPR1B","type":"exact"},{"name":"brachydactyly, type A1, D","type":"exact"}],"termid":"MONDO:0014798","xrefs":{"Monarch":{"xref_id":"0014798"}}}


id: MONDO:0010656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked dominant condition caused by mutation(s) in the IQSEC2 gene, encoding IQ motif and SEC7 domain-containing protein 2. It is characterized by substantially impaired intellectual functioning and behavioral abnormalities.","definition_xrefs":["NCIT:C133729"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 1","secondary_identifiers":["OMIM:309530","Orphanet:397933","MESH:C564489","DOID:0112038","MESH:C567906","UMLS:C2931498","GARD:22699","MEDGEN:444070"],"synonyms":[{"name":"IQSEC2","type":"related"},{"name":"IQSEC2-related disorder","type":"exact"},{"name":"IQSEC2-related epilepsy","type":"related"},{"name":"IQSEC2-related intellectual disability","type":"related"},{"name":"IQSEC2-related syndromic intellectual disability","type":"exact"},{"name":"MRX","type":"exact"},{"name":"MRX1","type":"exact"},{"name":"MRX78","type":"exact"},{"name":"X-linked intellectual disability 1","type":"related"},{"name":"X-linked intellectual disability 1/78","type":"related"},{"name":"X-linked intellectual disability 78","type":"related"},{"name":"intellectual developmental disorder, X-linked 1, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 1","type":"exact"},{"name":"mental retardation, X-linked 1","type":"exact"},{"name":"mental retardation, X-linked 18","type":"exact"},{"name":"mental retardation, X-linked 78","type":"exact"},{"name":"mental retardation, X-linked type 1","type":"exact"},{"name":"severe intellectual disability-progressive postnatal microcephaly-midline stereotypic hand movements syndrome","type":"related"}],"termid":"MONDO:0010656","xrefs":{"Monarch":{"xref_id":"0010656"}}}


id: MONDO:0011387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"psoriasis, susceptibility to","termid":"MONDO:0100171"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"psoriasis 4, susceptibility to","secondary_identifiers":["UMLS:C1858958","DOID:0111280","MEDGEN:347765","OMIM:603935"],"synonyms":[{"name":"PSORS4","type":"exact"},{"name":"psoriasis 4, susceptibility to","type":"exact"},{"name":"psoriasis susceptibility 4","type":"exact"}],"termid":"MONDO:0011387","xrefs":{"Monarch":{"xref_id":"0011387"}}}


id: PBO:0084167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of the mitochondrial pyruvate carrier (MPC); expressed during growth on fermentable carbon sources, and heterodimerizes with Mpc1p to form the fermentative isoform of MPC; MPC localizes to the mitochondrial inner membrane and mediates pyruvate uptake; MPC2 paralog, MPC3, heterodimerizes with Mpc1p to form the respiratory MPC isoform","termid":"PBO:0084167"}


id: PATO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A paedomorphic growth quality which is due to a delayed onset.","definition_xrefs":["PATOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paedomorphic growth","termid":"PATO:0001749"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postdisplaced growth","termid":"PATO:0001750"}


id: GO:0042556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulates the activity of the enzyme eukaryotic elongation factor-2 kinase.","definition_xrefs":["GOC:jl","PMID:11904175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0003674","GO:0098772"],"is_obsolete":false,"name":"eukaryotic elongation factor-2 kinase regulator activity","synonyms":[{"name":"eEF-2 kinase regulator","type":"exact"}],"termid":"GO:0042556"}


id: PBO:0063171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXIP1 divergent transcript","termid":"PBO:0063171"}


id: MONDO:0009108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperdibasic aminoaciduria, type 1 is characterized by increased renal clearance of lysine, ornithine and arginine, in the presence of normal concentrations of cystine. Heterozygous individuals are asymptomatic but homozygotes display intellectual deficit. To date, 25 heterozygotes and one homozygote have been reported.","definition_xrefs":["Orphanet:1032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hyperdibasic aminoaciduria type 1","secondary_identifiers":["UMLS:C2673736","icd11.foundation:1522058907","GARD:1854","MEDGEN:435997","MESH:C567132","OMIM:222690"],"synonyms":[{"name":"dibasic amino aciduria 1","type":"related"},{"name":"dibasic amino aciduria I","type":"related"},{"name":"dibasic amino aciduria type 1","type":"exact"},{"name":"dibasic aminoaciduria 1","type":"related"}],"termid":"MONDO:0009108","xrefs":{"Monarch":{"xref_id":"0009108"}}}


id: MONDO:0017559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital elbow dislocation","termid":"MONDO:0017469"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital elbow dislocation, bilateral","secondary_identifiers":["MEDGEN:1757455","UMLS:C5437776","Orphanet:295227","GARD:21224","icd11.foundation:1454955344"],"termid":"MONDO:0017559","xrefs":{"Monarch":{"xref_id":"0017559"}}}


id: PBO:0070101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 15 pseudogene","termid":"PBO:0070101"}


id: PBO:0017904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NST UDP-N-acetylglucosamine transmembrane transporter (predicted)","termid":"PBO:0017904"}


id: MONDO:0024643
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859173"}]},"cv_name":"mondo","definition":"A disorder that affects the muscle tissue of the heart. Representative examples include myocardial infarction, myocarditis, and cardiomyopathy.","definition_xrefs":["NCIT:C35544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"myocardial disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:57809008","UMLS:C3241958","MEDGEN:469033"],"synonyms":[{"name":"disease of myocardium","type":"exact"},{"name":"disease or disorder of myocardium","type":"exact"},{"name":"disorder of heart muscle","type":"related"},{"name":"disorder of myocardium","type":"exact"},{"name":"myocardial disease","type":"exact"},{"name":"myocardial disorder","type":"exact"},{"name":"myocardium disease","type":"exact"},{"name":"myocardium disease or disorder","type":"exact"}],"termid":"MONDO:0024643","terms_by_termid":{"MONDO:0859173":null},"xrefs":{"Monarch":{"xref_id":"0024643"}}}


id: PBO:0011076
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Defect in REplication","termid":"PBO:0011076"}


id: GO:0000451
data:
  {"annotated_genes":["SJAG_02350","SJAG_00744","SJAG_00943","SJAG_03410","SJAG_02377"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100808,113402,96137,112246,61907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000452"}]},"cv_name":"biological_process","definition":"The addition of a methyl group to the 2'-oxygen atom of a nucleotide residue in an rRNA molecule during ribosome biogenesis.","definition_xrefs":["ISBN:1555811337","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA methylation","termid":"GO:0031167"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00744":null,"SJAG_00943":null,"SJAG_02350":null,"SJAG_02377":null,"SJAG_03410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"rRNA 2'-O-methylation","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0000451","terms_by_termid":{"GO:0000452":null}}


id: PBO:0052196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily M regulatory beta subunit 4","termid":"PBO:0052196"}


id: PBO:0121097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PIGY pseudogene 1","termid":"PBO:0121097"}


id: PATO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's lacking or not exhibiting variation of shape.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"variability of shape","termid":"PATO:0001929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invariant shape","termid":"PATO:0001931"}


id: MONDO:0013915
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hypogonadotropic hypogonadism in which the cause of the disease is a mutation in the KISS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 13 with or without anosmia","secondary_identifiers":["OMIM:614842","UMLS:C3541462","ICD10CM:E23.0","MEDGEN:762090","GARD:18601","DOID:0090073"],"synonyms":[{"name":"HH13","type":"related"},{"name":"KISS1 hypogonadotropic hypogonadism","type":"exact"},{"name":"hypogonadotropic hypogonadism 13 with or without anosmia","type":"exact"},{"name":"hypogonadotropic hypogonadism caused by mutation in KISS1","type":"exact"}],"termid":"MONDO:0013915","xrefs":{"Monarch":{"xref_id":"0013915"}}}


id: GO:0048888
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuromast mantle cell. Mantle cells are non-sensory cells that surround the sensory strip, separating the neuromast from the epidermis. Mantle cells secrete the cupula in which the ciliary bundles of all of the hair cells are embedded.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"neuromast development","termid":"GO:0048884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast mantle cell differentiation","termid":"GO:0048888"}


id: PBO:0003243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S16 (predicted)","termid":"PBO:0003243"}


id: GO:0060362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Self-propelled movement of an organism from one location to another through the air that is part of the organism's response to external or internal stimuli resulting in flight.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotion involved in locomotory behavior","termid":"GO:0031987"},{"relation_name":"is_a","term_name":"flight","termid":"GO:0060361"},{"relation_name":"part_of","term_name":"flight behavior","termid":"GO:0007629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flight involved in flight behavior","termid":"GO:0060362"}


id: PBO:0044681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage inducible transcript 4","termid":"PBO:0044681"}


id: PBO:0030788
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_volume_spherical_vegetative_cell","termid":"PBO:0030788"}


id: GO:1902620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of microtubule minus-end binding.","definition_xrefs":["GO_REF:0000059","GOC:di","GOC:TermGenie","PMID:22939623"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microtubule minus-end binding (obsolete GO:1902620)","synonyms":[{"name":"activation of microtubule minus-end binding","type":"narrow"},{"name":"up regulation of microtubule minus-end binding","type":"exact"},{"name":"up-regulation of microtubule minus-end binding","type":"exact"},{"name":"upregulation of microtubule minus-end binding","type":"exact"}],"termid":"GO:1902620"}


id: PBO:0064592
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member K, pseudogene","termid":"PBO:0064592"}


id: PBO:0083348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene ECM38","termid":"PBO:0083348"}


id: MONDO:0015525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital pseudoarthrosis of the limbs","secondary_identifiers":["GARD:20015","Orphanet:157808","UMLS:C5190522","MESH:C535762","MEDGEN:1680202"],"synonyms":[{"name":"congenital pseudarthrosis of the limbs","type":"exact"},{"name":"congenital pseudoarthrosis","type":"related"}],"termid":"MONDO:0015525","xrefs":{"Monarch":{"xref_id":"0015525"}}}


id: GO:0140267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into the cytoplasm of a host cell, triggered by an interaction between the bilayer of a host membrane and a membrane-penetration symbiont protein. This process mediates the entry of some non-enveloped virus into host cells, and results in the release of the virus contents into the host cell cytoplasm.","definition_xrefs":["VZ:985","PMID:20427561","PMID:25055856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"},{"relation_name":"part_of","term_name":"symbiont entry into host cell","termid":"GO:0046718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of host membrane","synonyms":[{"name":"viral entry via permeabilization of host membrane","type":"narrow"}],"termid":"GO:0140267"}


id: PR:G2TRU9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- wtf6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRU9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein wtf6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC553.05c","synonyms":[{"name":"Spom972h-wtf6","type":"exact"}],"termid":"PR:G2TRU9"}


id: MONDO:0005583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that occurs in animals.","definition_xrefs":["EFO:0005932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease","termid":"MONDO:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-human animal disease","secondary_identifiers":["MESH:D000820"],"synonyms":[{"name":"animal disease","type":"exact"},{"name":"diseases, animal","type":"exact"}],"termid":"MONDO:0005583","xrefs":{"Monarch":{"xref_id":"0005583"}}}


id: GO:0033180
data:
  {"annotated_genes":["SJAG_00212","SJAG_04955","SJAG_01471","SJAG_04015","SJAG_01817","SJAG_00136","SJAG_01447","SJAG_01397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104685,111917,90042,61314,73169,98622,120808,100928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting V-type ATPase and catalyzes ATP hydrolysis. The V1 complex consists of: (1) a globular headpiece with three alternating copies of subunits A and B that form a ring, (2) a central rotational stalk composed of single copies of subunits D and F, and (3) a peripheral stalk made of subunits C, E, G and H. Subunits A and B mediate the hydrolysis of ATP at three reaction sites associated with subunit A.","definition_xrefs":["GOC:mah","ISBN:0716743663","PMID:16449553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex, catalytic domain","termid":"GO:0033178"},{"relation_name":"part_of","term_name":"proton-transporting V-type ATPase complex","termid":"GO:0033176"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting V-type ATPase, V1 domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033180","terms_by_termid":{"GO:0000221":null}}


id: GO:0035168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell derived from the larval lymph gland acquires the specialized features of a mature hemocyte. The lymph gland consists of three to six bilaterally paired lobes that are attached to the cardioblasts during larval stages, and it degenerates during pupal stages. Hemocytes are blood cells associated with a hemocoel (the cavity containing most of the major organs of the arthropod body) which are involved in defense and clotting of hemolymph, but not involved in transport of oxygen. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["PMID:14602069","GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemocyte differentiation","termid":"GO:0042386"},{"relation_name":"part_of","term_name":"larval lymph gland hemopoiesis","termid":"GO:0035167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval lymph gland hemocyte differentiation","synonyms":[{"name":"larval lymph gland arthropod blood cell differentiation","type":"exact"}],"termid":"GO:0035168"}


id: PBO:0052159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ6 antisense RNA 1","termid":"PBO:0052159"}


id: PR:O94296
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC887.12 gene.","definition_xrefs":["UniProtKB:O94296","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid-transporting ATPase C887.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC887.12","synonyms":[{"name":"Spom972h-SPBC887.12","type":"exact"}],"termid":"PR:O94296"}


id: FYPO:0000836
data:
  {"alleles_by_uniquename":{"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T ts","gene_uniquename":"SJAG_03351","name":"cut23-415","uniquename":"SJAG_03351:allele-1"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121722,121724,121723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001327"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered protein level","termid":"FYPO:0000834"},{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01956":null,"SJAG_03198":null,"SJAG_03351":null,"SJAG_03575":null},"genotype_count":3,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]}]},"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut23-415(A186T ts)","display_uniquename":"cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03351:allele-1","expression":"Not assayed or wild type"}]}]},"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"nuc2-1051(E405K ts)","display_uniquename":"nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01956:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"increased protein level","references_by_uniquename":{"PMID:23786411":null},"single_locus_annotated_genes":["SJAG_03351","SJAG_01956","SJAG_03575"],"single_locus_genotype_uniquenames":["cut23-415-A186T_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","nuc2-1051-E405K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type","apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased protein accumulation","type":"related"},{"name":"protein/peptide accumulation: increased","type":"related"}],"termid":"FYPO:0000836","terms_by_termid":{"FYECO:0000006":null,"FYECO:0000137":null,"FYPO:0001327":null}}


id: PBO:0054094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1447","termid":"PBO:0054094"}


id: PR:Q8TFG3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB18E9.05c gene.","definition_xrefs":["UniProtKB:Q8TFG3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein PB18E9.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.05c","synonyms":[{"name":"Spom972h-SPAPB18E9.05c","type":"exact"}],"termid":"PR:Q8TFG3"}


id: PATO:0001382
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing four homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Tetraploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraploid","termid":"PATO:0001382"}


id: MONDO:0003050
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A poorly differentiated non-small cell lung carcinoma composed of large polygonal cells without evidence of glandular or squamous differentiation. There is a male predilection.","definition_xrefs":["NCIT:C4450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large cell carcinoma","termid":"MONDO:0005232"},{"relation_name":"is_a","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung large cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0345958","ICD9:162.9","ONCOTREE:LCLC","MONDO:0006024","MEDGEN:91060","SCTID:254629004","DOID:4556","EFO:0003050"],"synonyms":[{"name":"LCLC","type":"related"},{"name":"anaplastic lung carcinoma","type":"exact"},{"name":"large cell carcinoma of lung","type":"exact"},{"name":"large cell carcinoma of the lung","type":"exact"},{"name":"large cell lung cancer","type":"exact"},{"name":"large cell lung carcinoma","type":"exact"},{"name":"large cell undifferentiated lung carcinoma","type":"exact"},{"name":"lung large cell carcinoma","type":"exact"}],"termid":"MONDO:0003050","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0003050"}}}


id: PBO:0113220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; binds to the 3'UTR of cell wall-related mRNAs and stabilizes these mRNAs, acting in parallel to cell wall integrity signaling to maintain expression of cell wall genes during stress; acts antagonistically to Nab6p; deletion mutants display increased sensitivity to some cell wall disrupting agents; expression negatively regulated by cAMP","termid":"PBO:0113220"}


id: FYPO:0005320
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during metaphase of mitosis is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal protein level during mitotic metaphase","synonyms":[{"name":"normal protein accumulation during mitotic metaphase","type":"related"},{"name":"normal protein level during metaphase of mitotic cell cycle","type":"exact"},{"name":"normal protein level during mitotic metaphase during vegetative growth","type":"exact"}],"termid":"FYPO:0005320"}


id: GO:0001962
data:
  {"annotated_genes":["SJAG_03149","SJAG_03150"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112760,112766],"is_not":false,"summary":null,"term":"GO:0001962"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a galactose residue from a donor molecule, such as GDP-galactose or UDP-galactose, to an oligosaccharide, forming an alpha-(1->3) linkage.","definition_xrefs":["GOC:hjd","PMID:10854427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactosyltransferase activity","termid":"GO:0008378"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03149":null,"SJAG_03150":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"isoglobotriaosylceramide synthase","type":"narrow"}],"termid":"GO:0001962","terms_by_termid":{"GO:0001962":null}}


id: PBO:0083717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein that functions in assembly of the V0 sector of V-ATPase; functions with other assembly factors; null mutation enhances the vacuolar ATPase (V-ATPase) deficiency of a vma21 mutant impaired in endoplasmic reticulum (ER) retrieval","termid":"PBO:0083717"}


id: MONDO:0010038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Growth delay due to IGF-I resistance is characterized by variable intrauterine and postnatal growth retardation and elevated serum IGF-I levels. Addition features include variable degrees of intellectual deficit, microcephaly and dysmorphism (broad nasal bridge and tip, smooth philtrum, thin upper and everted lower lips, short fingers, clinodactyly, wide-set nipples and pectus excavatum).","definition_xrefs":["Orphanet:73273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"growth hormone insensitivity syndrome","termid":"MONDO:0015892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth delay due to insulin-like growth factor I resistance","secondary_identifiers":["MESH:C564816","MEDGEN:338622","icd11.foundation:272435490","NANDO:2200320","UMLS:C1849157","GARD:10609","SCTID:715625007","OMIM:270450"],"synonyms":[{"name":"IGF-1 resistance","type":"related"},{"name":"IGF-I resistance","type":"related"},{"name":"IGF1RES","type":"related"},{"name":"Somatomedin end-organ insensitivity to","type":"related"},{"name":"Somatomedin, end-organ insensitivity to","type":"related"},{"name":"Somatomedin-C, resistance to","type":"related"},{"name":"Somatomedin-c resistance to","type":"related"},{"name":"growth delay due to insulin-like growth factor I resistance","type":"exact"},{"name":"insulin-like Growth Factor I, resistance to, due to increased binding Protein","type":"related"},{"name":"insulin-like growth factor 1 resistance to","type":"related"},{"name":"insulin-like growth factor I, resistance to","type":"related"},{"name":"resistance to IGF-1","type":"exact"}],"termid":"MONDO:0010038","xrefs":{"Monarch":{"xref_id":"0010038"}}}


id: PBO:0002928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase Mtg2 (predicted)","termid":"PBO:0002928"}


id: MONDO:0100241
data:
  {"annotated_genes":["SJAG_02431","SJAG_02509","SJAG_01852","SJAG_02951","SJAG_04621","SJAG_04387","SJAG_03818","SJAG_01732","SJAG_03703","SJAG_02744","SJAG_04003","SJAG_04509","SJAG_01784"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88337,88338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015912"},{"annotations":[88623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800047"},{"annotations":[88954,88955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030827"},{"annotations":[87879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014757"},{"annotations":[87131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014078"},{"annotations":[89199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010743"},{"annotations":[89159,89158,89157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958333"},{"annotations":[88286],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012775"},{"annotations":[89091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"}]},"cv_name":"mondo","definition":"An instance of thrombocytopenia that is inherited.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia","termid":"MONDO:0002049"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":13,"genes_by_uniquename":{"SJAG_01732":null,"SJAG_01784":null,"SJAG_01852":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02744":null,"SJAG_02951":null,"SJAG_03703":null,"SJAG_03818":null,"SJAG_04003":null,"SJAG_04387":null,"SJAG_04509":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"inherited thrombocytopenia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:313900"],"synonyms":[{"name":"hereditary thrombocytopenia","type":"exact"}],"termid":"MONDO:0100241","terms_by_termid":{"MONDO:0010121":null,"MONDO:0010743":null,"MONDO:0012775":null,"MONDO:0014078":null,"MONDO:0014757":null,"MONDO:0015912":null,"MONDO:0030827":null,"MONDO:0800047":null,"MONDO:0958333":null},"xrefs":{"Monarch":{"xref_id":"0100241"}}}


id: GO:0018021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of peptidyl-L-histidine to form peptidyl-L-1'-methyl-L-histidine (otherwise known as tau-methylhistidine, tele-methylhistidine) or peptidyl-L-3'-methyl-L-histidine (otherwise known as pi-methylhistidine, pros-methylhistidine).","definition_xrefs":["RESID:AA0073","RESID:AA0317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein methylation","termid":"GO:0006479"},{"relation_name":"is_a","term_name":"peptidyl-histidine modification","termid":"GO:0018202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine methylation","termid":"GO:0018021"}


id: PBO:0052216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 3","termid":"PBO:0052216"}


id: MOD:00739
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a cluster of iron and sulfur atoms for hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron containing modified residue","termid":"MOD:00738"},{"relation_name":"is_a","term_name":"sulfur containing modified residue","termid":"MOD:00860"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster containing modification","synonyms":[{"name":"FeSRes","type":"exact"}],"termid":"MOD:00739"}


id: PR:Q9UUI3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sap145 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUI3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor sap145 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.10c","synonyms":[{"name":"Spom972h-sap145","type":"exact"},{"name":"spliceosome-associated protein 145 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUI3"}


id: MONDO:0007252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare multiple congenital malformation syndrome characterized by congenital contractures of hand and feet with variable degrees of severity of camptodactyly, clubfoot and, less frequently, cleft palate. Intelligence is normal but in some cases, additional abnormalities, such as short stature, kyphoscoliosis, ptosis, micrognathia, and cryptorchidism may also be present. Gordon syndrome, Marden-Walker syndrome and arthrogryposis with oculomotor limitation and electroretinal anomalies clinically and genetically overlap, and could represent variable expressions of the same condition.","definition_xrefs":["Orphanet:376"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gordon syndrome","secondary_identifiers":["MESH:C537288","SCTID:237850008","DOID:0111607","GARD:2553","ICD9:579.8","OMIM:114300","UMLS:C0220666","MEDGEN:66314","NORD:1199"],"synonyms":[{"name":"DA3","type":"related"},{"name":"Gordon syndrome","type":"exact"},{"name":"arthrogryposis distal type 3","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2A","type":"related"},{"name":"arthrogryposis, distal, type 3","type":"related"},{"name":"camptodactyly, cleft palate, and clubfoot","type":"related"},{"name":"camptodactyly-cleft palate-clubfoot syndrome","type":"exact"},{"name":"distal arthrogryposis type 3","type":"exact"},{"name":"distal arthrogryposis type IIA","type":"exact"}],"termid":"MONDO:0007252","xrefs":{"Monarch":{"xref_id":"0007252"}}}


id: PBO:0090657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome complex subunit alpha 6 Pre5","termid":"PBO:0090657"}


id: PBO:0005858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein Rpp1-3","termid":"PBO:0005858"}


id: PBO:0089627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-1 alpha folding chaperone, zinc finger protein Zpr1","termid":"PBO:0089627"}


id: PBO:0078089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex 2 pseudogene 6","termid":"PBO:0078089"}


id: GO:0046541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of saliva from the salivary glands. In man, the saliva is a turbid and slightly viscous fluid, generally of an alkaline reaction, and is secreted by the parotid, submaxillary, and sublingual glands. In the mouth the saliva is mixed with the secretion from the buccal glands. In man and many animals, saliva is an important digestive fluid on account of the presence of the peculiar enzyme, ptyalin.","definition_xrefs":["GOC:curators","UBERON:0001836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"digestive system process","termid":"GO:0022600"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"saliva secretion","secondary_identifiers":["Wikipedia:Salivation"],"synonyms":[{"name":"salivation","type":"exact"}],"termid":"GO:0046541"}


id: PBO:0005365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase, Arb family ABCF1-like (predicted)","termid":"PBO:0005365"}


id: PBO:0111739
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dh repeats","termid":"PBO:0111739"}


id: FYPO:0004185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which cells show increased sensitivity to myriocin during mating. Cells stop growing (and may die) at a concentration of myriocin that allows wild type cells to grow.","definition_xrefs":["PMID:24514900","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical","termid":"FYPO:0002683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to myriocin during mating","synonyms":[{"name":"sensitive to myriocin during conjugation with cellular fusion","type":"exact"},{"name":"sensitivity to chemicals interfering with lipids during mating","type":"broad"}],"termid":"FYPO:0004185"}


id: MONDO:0008595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichoepitheliomas, multiple desmoplastic","secondary_identifiers":["UMLS:C1860849","MESH:C566034","OMIM:190345","MEDGEN:348200"],"synonyms":[{"name":"trichoepitheliomas, multiple desmoplastic","type":"exact"}],"termid":"MONDO:0008595","xrefs":{"Monarch":{"xref_id":"0008595"}}}


id: PBO:0057381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aw","termid":"PBO:0057381"}


id: PBO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine","termid":"PBO:0002055"}


id: GO:0120197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The respiratory system process driven by motile cilia on epithelial cells of the respiratory tract by which mucus and associated inhaled particles and pathogens trapped within it are moved out of the airways.","definition_xrefs":["PMID:27864314","GOC:krc","PMID:24119105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system process","termid":"GO:0003016"},{"relation_name":"is_a","term_name":"epithelial cilium movement involved in extracellular fluid movement","termid":"GO:0003351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"mucociliary clearance","synonyms":[{"name":"MCC","type":"related"},{"name":"MCT","type":"related"},{"name":"mucociliary transport","type":"exact"}],"termid":"GO:0120197"}


id: PBO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_proton_transport","termid":"PBO:0030636"}


id: FYPO:0000234
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules is abnormal during interphase of the mitotic cell cycle. Normally, microtubules are nucleated from interphase microtubule organizing centers (iMTOCs) and from the cytoplasmic face of the spindle pole body (SPB).","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal cytoplasmic interphase microtubule nucleation","synonyms":[{"name":"abnormal cytoplasmic interphase microtubule nucleation during vegetative growth","type":"exact"},{"name":"abnormal cytoplasmic microtubule nucleation during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal cytoplasmic microtubule nucleation during mitotic interphase","type":"exact"},{"name":"abnormal interphase cytoplasmic microtubule nucleation","type":"exact"},{"name":"abnormal interphase microtubule nucleation","type":"exact"}],"termid":"FYPO:0000234"}


id: PBO:0086561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR082C is not an essential gene","termid":"PBO:0086561"}


id: PBO:0072226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 1","termid":"PBO:0072226"}


id: PBO:0091246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dehydrogenase, (Old yellow enzyme) involved in small alpha,beta-unsaturated carbonyl compounds","termid":"PBO:0091246"}


id: MONDO:0012832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the IRF5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 14","secondary_identifiers":["MEDGEN:436860","OMIM:612245","MESH:C567383","DOID:0110895","UMLS:C2677100"],"synonyms":[{"name":"IBD14","type":"exact"},{"name":"IRF5 inflammatory bowel disease","type":"exact"},{"name":"inflammatory bowel disease 14","type":"exact"},{"name":"inflammatory bowel disease caused by mutation in IRF5","type":"exact"},{"name":"inflammatory bowel disease type 14","type":"exact"}],"termid":"MONDO:0012832","xrefs":{"Monarch":{"xref_id":"0012832"}}}


id: GO:1901142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving insulin.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"insulin metabolic process","synonyms":[{"name":"insulin metabolism","type":"exact"}],"termid":"GO:1901142"}


id: GO:0009510
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tightly wound cylinder of membrane that is located within the plasmodesmal pore and runs the length of the plasmodesma. The desmotubule likely provides a rigid stability to plasmodesmata and confers a fixed diameter and pore size to the plasmodesmal canal, and is linked to the endoplasmic reticulum in each of the adjacent cell.","definition_xrefs":["PMID:29880547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"endoplasmic reticulum","termid":"GO:0005783"},{"relation_name":"part_of","term_name":"plasma membrane","termid":"GO:0005886"},{"relation_name":"part_of","term_name":"plasmodesma","termid":"GO:0009506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005886","GO:0005783","GO:0005575"],"is_obsolete":false,"name":"plasmodesmatal desmotubule","secondary_identifiers":["GO:0009572"],"synonyms":[{"name":"desmotubule central rod","type":"related"}],"termid":"GO:0009510"}


id: GO:2001164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues.","definition_xrefs":["PMID:15149594"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phosphorylation of RNA polymerase II C-terminal domain serine 2 residues (obsolete GO:2001164)","termid":"GO:2001164"}


id: GO:0099592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which endocytosed synaptic vesicles fuse to the presynaptic endosome followed by sorting of synaptic vesicle components and budding of new synaptic vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"},{"relation_name":"is_a","term_name":"synaptic vesicle endosomal processing","termid":"GO:0099532"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"endocytosed synaptic vesicle processing via endosome","synonyms":[{"name":"synaptic vesicle processing via endosome involved in synaptic vesicle recycling","type":"exact"}],"termid":"GO:0099592"}


id: PR:O74922
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC757.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC757.12","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC757.12","type":"exact"}],"termid":"PR:O74922"}


id: GO:0072192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an epithelial cell in the urothelium. The urothelium is the epithelial tube of the ureter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"ureter urothelium development","termid":"GO:0072190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter epithelial cell differentiation","termid":"GO:0072192"}


id: PBO:0027775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_2-bromo-1-(4-methoxyphenyl)-3-((4-methylphenyl)sulfonyl)-1-propanone","termid":"PBO:0027775"}


id: PATO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000196 vocalization (obsolete PATO:0000196)","termid":"PATO:0000196"}


id: FYPO:0005895
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to centromeric chromatin is decreased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin during mitotic G1 phase","termid":"FYPO:0005896"},{"relation_name":"is_a","term_name":"decreased protein localization to centromeric chromatin during vegetative growth","termid":"FYPO:0006599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to centromeric chromatin during mitotic G1 phase","synonyms":[{"name":"decreased protein localisation to centromeric chromatin during mitotic G1 phase","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"decreased protein localization to centromeric chromatin during G1 phase of mitotic cell cycle","type":"related"},{"name":"reduced protein localization to centromeric chromatin during mitotic G1 phase","type":"exact"}],"termid":"FYPO:0005895"}


id: MONDO:0024348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pityriasis capitis (obsolete MONDO:0024348)","secondary_identifiers":["SCTID:400201008"],"synonyms":[{"name":"pityriasis capitis","type":"exact"}],"termid":"MONDO:0024348","xrefs":{"Monarch":{"xref_id":"0024348"}}}


id: GO:0044161
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle formed of membrane or protein, found in the cytoplasm of a host cell.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell cytoplasmic vesicle","termid":"GO:0044161"}


id: PBO:0052699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17","termid":"PBO:0052699"}


id: GO:0090307
data:
  {"annotated_genes":["SJAG_00794","SJAG_02336","SJAG_00773","SJAG_02609","SJAG_01546","SJAG_04901","SJAG_03073","SJAG_03062","SJAG_03835","SJAG_01215","SJAG_03540","SJAG_01224","SJAG_04464","SJAG_02332","SJAG_04841","SJAG_01297","SJAG_04745","SJAG_03116","SJAG_02761","SJAG_07018","SJAG_02246","SJAG_01613"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98881,103012,111654,112636,120747],"is_not":false,"summary":null,"term":"GO:0090307"},{"annotations":[79763,77767,97324],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[101237,76037,98780,105067],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990810"},{"annotations":[100637,103463,101872,99292,102406,105916,110301],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061804"},{"annotations":[101243,103464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140641"},{"annotations":[99293,79120,96790,101244,110897],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051256"},{"annotations":[113491],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0110161"},{"annotations":[73397],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1901673"}]},"cv_name":"biological_process","definition":"Mitotic bipolar spindle assembly begins with spindle microtubule nucleation from the separated spindle pole body, includes spindle elongation during prometaphase, and is complete when all kinetochores are stably attached the spindle, and the spindle assembly checkpoint is satisfied.","definition_xrefs":["GOC:vw","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic spindle organization","termid":"GO:0007052"},{"relation_name":"is_a","term_name":"spindle assembly","termid":"GO:0051225"},{"relation_name":"part_of","term_name":"mitotic sister chromatid segregation","termid":"GO:0000070"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_01215":null,"SJAG_01224":null,"SJAG_01297":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_02246":null,"SJAG_02332":null,"SJAG_02336":null,"SJAG_02609":null,"SJAG_02761":null,"SJAG_03062":null,"SJAG_03073":null,"SJAG_03116":null,"SJAG_03540":null,"SJAG_03835":null,"SJAG_04464":null,"SJAG_04745":null,"SJAG_04841":null,"SJAG_04901":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0000070"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0007010","GO:0008150","GO:0044085","GO:0000226"],"is_obsolete":false,"name":"mitotic spindle assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"spindle assembly involved in mitosis","type":"exact"}],"termid":"GO:0090307","terms_by_termid":{"GO:0000073":null,"GO:0051256":null,"GO:0061804":null,"GO:0090307":null,"GO:0110161":null,"GO:0140641":null,"GO:1901673":null,"GO:1990810":null}}


id: MONDO:0008644
data:
  {"annotated_genes":["SJAG_02317"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89138],"is_not":false,"summary":null,"term":"MONDO:0008644"}]},"cv_name":"mondo","definition":"A chromosomal disease that has material basis in deletion polymorphisms at chromosome location 22q11 and is characterized by variable developmental problems and schizoid features.","definition_xrefs":["DOID:12583","PMID:19243607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"22q11.2 deletion syndrome","termid":"MONDO:0018923"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"velocardiofacial syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D004062","NANDO:1200339","OMIM:192430","NANDO:2200712","ICD9:758.32","UMLS:C0220704","GARD:15123","MEDGEN:65085","NANDO:1200688"],"synonyms":[{"name":"22q11 deletion syndrome","type":"exact"},{"name":"Shprintzen VCF syndrome","type":"exact"},{"name":"Shprintzen syndrome","type":"related"},{"name":"VCF syndrome","type":"exact"},{"name":"VCF-velocardiofacial syndrome","type":"exact"},{"name":"chromosome 22Q11.2 deletion syndrome","type":"related"},{"name":"deletion 22q11.2 syndrome","type":"exact"},{"name":"velocardiofacial syndrome","type":"exact"}],"termid":"MONDO:0008644","terms_by_termid":{"MONDO:0008644":null},"xrefs":{"Monarch":{"xref_id":"0008644"}}}


id: PBO:0083143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps 5' end of ORF YMR317W","termid":"PBO:0083143"}


id: PBO:0083257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; large scale expression analysis showed an increase in mRNA accumulation in strains mutant for exosome components","termid":"PBO:0083257"}


id: PBO:0079273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 39D, pseudogene","termid":"PBO:0079273"}


id: PBO:0030612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_galactomannan_level","termid":"PBO:0030612"}


id: MONDO:0017885
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromophobe renal cell carcinoma is a rare subtype of renal cell carcinoma, originating from the intercalating cells of the collecting ducts and macroscopically manifesting as a well-circumscribed, highly lobulated, solid tumor that is usually diagnosed at an early stage. It is frequently asymptomatic, or may present with nonspecific symptoms, such as weight loss, fever or fatigue. The classic presentation observed in renal tumors (hematuria, flank pain and palpable mass) is occasionally observed and usually indicates an advanced stage of the disease. It is most frequently sporadic however, several familial cases, associated with Birt-Hogg DubC) syndrome, have been described.","definition_xrefs":["Orphanet:319303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell adenocarcinoma","termid":"MONDO:0005549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"chromophobe renal cell carcinoma","secondary_identifiers":["EFO:0000335","ICDO:8270/3","ICDO:8317/3","UMLS:C1266042","MEDGEN:266091","GARD:6064","DOID:4471","ONCOTREE:CHRCC","SCTID:733471003","NCIT:C4146"],"synonyms":[{"name":"CHRCC","type":"related"},{"name":"CRCC","type":"related"},{"name":"ChRCC","type":"related"},{"name":"chromophobe adenocarcinoma","type":"exact"},{"name":"chromophobe carcinoma","type":"exact"},{"name":"chromophobe carcinoma of kidney","type":"exact"},{"name":"chromophobe carcinoma of the kidney","type":"exact"},{"name":"chromophobe cell carcinoma of kidney","type":"exact"},{"name":"chromophobe cell carcinoma of the kidney","type":"exact"},{"name":"chromophobe renal cell adenocarcinoma","type":"exact"},{"name":"chromophobe renal cell cancer","type":"exact"},{"name":"chromophobe renal cell carcinoma","type":"exact"},{"name":"kidney chromophobe","type":"exact"},{"name":"renal cell carcinoma, chromophobe cell","type":"exact"},{"name":"renal cell carcinoma, chromophobe type","type":"exact"}],"termid":"MONDO:0017885","xrefs":{"Monarch":{"xref_id":"0017885"}}}


id: FYECO:0000088
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 2-oxoglutarate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 2-OG","synonyms":[{"name":"2-OG present","type":"exact"},{"name":"2-oxoglutarate added","type":"exact"},{"name":"2-oxoglutarate present","type":"exact"}],"termid":"FYECO:0000088"}


id: PBO:0069990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1285, pseudogene","termid":"PBO:0069990"}


id: GO:2001300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a lipoxin. A lipoxin is a non-classic eicosanoid and signaling molecule that has four conjugated double bonds and is derived from arachidonic acid.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid derivative metabolic process","termid":"GO:1901568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipoxin metabolic process","synonyms":[{"name":"lipoxin metabolism","type":"exact"}],"termid":"GO:2001300"}


id: GO:0034270
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the Cvt pathway. In budding yeast, the Cvt complex consists of multimers of preApe1p.","definition_xrefs":["GOC:rb","PMID:15659643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"Cvt complex","synonyms":[{"name":"cytoplasm to vacuole targeting complex","type":"exact"},{"name":"cytoplasm-to-vacuole targeting complex","type":"exact"}],"termid":"GO:0034270"}


id: FYPO:0003599
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which formation of the mature 3' end of an snRNA molecule is normal (i.e. indistinguishable from wild type).","definition_xrefs":["GO:0034472","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA processing","termid":"FYPO:0001980"},{"relation_name":"is_a","term_name":"normal RNA metabolic process","termid":"FYPO:0004850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal snRNA 3'-end processing","synonyms":[{"name":"normal snRNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"normal snRNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0003599"}


id: PBO:0113138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; protein abundance increases in response to DNA replication stress; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bacteria","termid":"PBO:0113138"}


id: GO:0044070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of anions, atoms or small molecules with a net negative charge into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"monoatomic anion transport","termid":"GO:0006820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of monoatomic anion transport","synonyms":[{"name":"regulation of anion transport","type":"broad"}],"termid":"GO:0044070"}


id: MONDO:0020135
data:
  {"annotated_genes":["SJAG_04067","SJAG_04123","SJAG_01791","SJAG_04084","SJAG_01260","SJAG_04902","SJAG_04321","SJAG_03601","SJAG_03328","SJAG_05277","SJAG_00653","SJAG_04824","SJAG_04907","SJAG_01970","SJAG_01818","SJAG_00639","SJAG_00754","SJAG_01645","SJAG_00900"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014349"},{"annotations":[88291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[89078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[89082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[88412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014370"},{"annotations":[87528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009166"},{"annotations":[87304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012438"},{"annotations":[87293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012683"},{"annotations":[89041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013990"},{"annotations":[88382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014351"},{"annotations":[88237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032643"},{"annotations":[88940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032831"},{"annotations":[88491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030258"},{"annotations":[88492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030259"},{"annotations":[88205,88204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030438"},{"annotations":[88896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[88375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054844"},{"annotations":[88493],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030261"},{"annotations":[88073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasias (PCH) are a rare heterogeneous group of diseases characterized by hypoplasia and atrophy and/or early neurodegeneration of the cerebellum and pons. Eight subtypes named type 1-8 have been described, generally inherited in an autosomal recessive pattern.","definition_xrefs":["Orphanet:98523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00639":null,"SJAG_00653":null,"SJAG_00754":null,"SJAG_00900":null,"SJAG_01260":null,"SJAG_01645":null,"SJAG_01791":null,"SJAG_01818":null,"SJAG_01970":null,"SJAG_03328":null,"SJAG_03601":null,"SJAG_04067":null,"SJAG_04084":null,"SJAG_04123":null,"SJAG_04321":null,"SJAG_04824":null,"SJAG_04902":null,"SJAG_04907":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:10977","SCTID:45163000","icd11.foundation:1565266279","MESH:C580383","UMLS:C1261175","DOID:0060264","MEDGEN:224703","NORD:1596","OMIMPS:607596"],"synonyms":[{"name":"PCH","type":"exact"},{"name":"isolated pontocerebellar hypoplasia","type":"narrow"},{"name":"nonsyndromic pontocerebellar hypoplasia","type":"narrow"},{"name":"pontocerebellar hypoplasia","type":"exact"},{"name":"pontoneocerebellar atrophy","type":"exact"},{"name":"pontoneocerebllar hypoplasia","type":"exact"}],"termid":"MONDO:0020135","terms_by_termid":{"MONDO:0009166":null,"MONDO:0010190":null,"MONDO:0012438":null,"MONDO:0012683":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0013853":null,"MONDO:0013990":null,"MONDO:0014349":null,"MONDO:0014351":null,"MONDO:0014370":null,"MONDO:0014485":null,"MONDO:0014874":null,"MONDO:0030258":null,"MONDO:0030259":null,"MONDO:0030261":null,"MONDO:0030438":null,"MONDO:0032643":null,"MONDO:0032831":null,"MONDO:0054844":null},"xrefs":{"Monarch":{"xref_id":"0020135"}}}


id: PBO:0012250
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterodimeric","termid":"PBO:0012250"}


id: GO:0002204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immunoglobulin genes are formed through recombination of the germline genetic elements, also known as immunoglobulin gene segments, within a single locus following the induction of and contributing to an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immunoglobulins involved in immune response","termid":"GO:0002208"},{"relation_name":"is_a","term_name":"somatic recombination of immunoglobulin gene segments","termid":"GO:0016447"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"somatic recombination of immunoglobulin genes involved in immune response","synonyms":[{"name":"somatic recombination of antibody genes during immune response","type":"related"},{"name":"somatic recombination of immunoglobulin genes during immune response","type":"related"}],"termid":"GO:0002204"}


id: PBO:0002826
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulates pss1","termid":"PBO:0002826"}


id: MONDO:0043512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Encephalopathy resulting from trauma.","definition_xrefs":["NCIT:C35542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"traumatic encephalopathy","secondary_identifiers":["icd11.foundation:1673722101","SCTID:230282000","MEDGEN:536661","UMLS:C0236959"],"synonyms":[{"name":"dementia due to head trauma","type":"narrow"},{"name":"post-traumatic brain syndrome","type":"narrow"},{"name":"post-traumatic dementia","type":"narrow"},{"name":"traumatic encephalopathy","type":"exact"}],"termid":"MONDO:0043512","xrefs":{"Monarch":{"xref_id":"0043512"}}}


id: MONDO:0021670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"post-infectious disorder","termid":"MONDO:0021669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-infectious syndrome","termid":"MONDO:0021670","xrefs":{"Monarch":{"xref_id":"0021670"}}}


id: PBO:0088843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase, Sirtuin family, NAD-dependent Hst2","termid":"PBO:0088843"}


id: GO:0071810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or extent of fever generation via regulation of the frequency, rate or extent of the regulated release of a prostaglandin from a cell.","definition_xrefs":["GOC:mah","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fever generation","termid":"GO:0031620"},{"relation_name":"is_a","term_name":"regulation of prostaglandin secretion","termid":"GO:0032306"},{"relation_name":"regulates","term_name":"regulation of fever generation by prostaglandin secretion","termid":"GO:0100009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of fever generation by regulation of prostaglandin secretion","termid":"GO:0071810"}


id: GO:0097354
data:
  {"annotated_genes":["SJAG_03810","SJAG_02583"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62211,69722],"is_not":false,"summary":null,"term":"GO:0097354"}]},"cv_name":"biological_process","definition":"The covalent attachment of a prenyl group to a molecule; geranyl, farnesyl, or geranylgeranyl groups may be added.","definition_xrefs":["GOC:di","PMID:22660767","PMID:21351751","PMID:22642693","PMID:18029206","PMID:22123822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_03810":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prenylation","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0097354","terms_by_termid":{"GO:0097354":null}}


id: GO:1905109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of pulmonary blood vessel remodeling.","definition_xrefs":["GOC:bc","GO_REF:0000058","GOC:TermGenie","GOC:BHF_miRNA","PMID:22161164","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of blood vessel remodeling","termid":"GO:0060312"},{"relation_name":"regulates","term_name":"pulmonary blood vessel remodeling","termid":"GO:0101010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of pulmonary blood vessel remodeling","synonyms":[{"name":"regulation of pulmonary blood vessel remodelling","type":"exact"}],"termid":"GO:1905109"}


id: GO:0033755
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 sulfur + 4 H2O + O2 = 2 hydrogen sulfide + 2 bisulfite + 2 H+.","definition_xrefs":["EC:1.13.11.55","PMID:1522063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"sulfur oxygenase/reductase activity","secondary_identifiers":["RHEA:13957","MetaCyc:1.13.11.55-RXN"],"synonyms":[{"name":"SOR","type":"related"},{"name":"sulfur oxygenase activity","type":"broad"},{"name":"sulfur:oxygen oxidoreductase (hydrogen-sulfide- and sulfite-forming) activity","type":"related"},{"name":"sulphur oxygenase/reductase activity","type":"exact"}],"termid":"GO:0033755"}


id: MONDO:0003413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm arising from the hair follicle.","definition_xrefs":["NCIT:C7367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hair follicle neoplasm","secondary_identifiers":["DOID:5375","MEDGEN:167814","UMLS:C0859920"],"synonyms":[{"name":"hair follicle neoplasm","type":"exact"},{"name":"hair follicle neoplasm (disease)","type":"exact"},{"name":"hair follicle tumor","type":"exact"},{"name":"hair follicle tumour","type":"exact"},{"name":"hair matrix neoplasm","type":"related"},{"name":"hair matrix tumor","type":"related"},{"name":"hair matrix tumour","type":"related"},{"name":"neoplasm of hair follicle","type":"exact"},{"name":"neoplasm of the hair follicle","type":"exact"},{"name":"tumor of hair follicle","type":"exact"},{"name":"tumour of hair follicle","type":"exact"}],"termid":"MONDO:0003413","xrefs":{"Monarch":{"xref_id":"0003413"}}}


id: PBO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence updated","termid":"PBO:0002438"}


id: PBO:0013110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead transcription factor Fkh2","termid":"PBO:0013110"}


id: PBO:0053164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor adaptor protein 1","termid":"PBO:0053164"}


id: PBO:0055838
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and guanylate kinase domain containing","termid":"PBO:0055838"}


id: MONDO:0100500
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id: MONDO:0019394
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Boichis syndrome consists of the association of congenital nephronophthisis leading to renal failure, and hepatic fibrosis. It has been described in five members of one family, two of whom died from renal failure. The association of Boichis syndrome with tapetoretinal degeneration and intellectual deficit has also been reported in one family: the so-called Senior-Boichis syndrome could be in fact the same entity, and was later reported in a 12 year-old child.","definition_xrefs":["Orphanet:84081"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"Senior-Boichis syndrome","secondary_identifiers":["UMLS:C4274018","SCTID:717187000","GARD:16730","MEDGEN:902988"],"synonyms":[{"name":"Boichis disease","type":"exact"},{"name":"nephronophthisis-hepatic fibrosis syndrome","type":"exact"}],"termid":"MONDO:0019394","xrefs":{"Monarch":{"xref_id":"0019394"}}}


id: MONDO:0011106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome is a syndromic developmental defect of the eye characterized by dislocated or subluxated crystalline lenses, anterior segment abnormalities, and distinctive facial features such as flat cheeks and a prominent, beaked nose. Affected individuals may develop nontraumatic conjunctival cysts, also referred to as filtering blebs.","definition_xrefs":["Orphanet:412022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lens disorder","termid":"MONDO:0001176"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome","secondary_identifiers":["MEDGEN:330396","OMIM:601552","UMLS:C1832167","MESH:C563293","GARD:17688"],"synonyms":[{"name":"FDLAB","type":"related"},{"name":"FDLAB syndrome","type":"exact"},{"name":"Traboulsi syndrome","type":"exact"},{"name":"ectopia lentis, spontaneous filtering blebs, and craniofacial Dysmorphism","type":"related"},{"name":"facial dysmorphism, lens dislocation, anterior segment abnormalities, and spontaneous filtering blebs","type":"related"},{"name":"facial dysmorphism-lens dislocation-anterior segment abnormalities-nontraumatic conjunctive cysts syndrome","type":"exact"},{"name":"facial dysmorphism-lens dislocation-anterior segment abnormalities-spontaneous filtering blebs syndrome","type":"exact"}],"termid":"MONDO:0011106","xrefs":{"Monarch":{"xref_id":"0011106"}}}


id: PomGeneEx:0000006
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneEx","definition":"A gene expression qualifier that indicates that an RNA or protein is not detectable under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"absent","synonyms":[{"name":"gene expression absent","type":"exact"},{"name":"gene product absent","type":"exact"}],"termid":"PomGeneEx:0000006"}


id: FYPO:0008260
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cell surface is decreased, and the localizatiion to the endoplasmic reticulum is increased. The cell surface refers to the external part of the cell wall and/or plasma membrane.","definition_xrefs":["PMID:22848669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cell surface","termid":"FYPO:0008258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to cell surface, protein mislocalized to endoplasmic reticulum","termid":"FYPO:0008260"}


id: GO:0034461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a uropod detaches from the cell substrate and retracts the rear of a migrating cell.","definition_xrefs":["PMID:10704379","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uropod organization","termid":"GO:0032796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uropod retraction","termid":"GO:0034461"}


id: PBO:0067384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 488, pseudogene","termid":"PBO:0067384"}


id: MONDO:0032578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical dysplasia, complex, with other brain malformations 9","secondary_identifiers":["MEDGEN:1648399","OMIM:618174","UMLS:C4748540"],"synonyms":[{"name":"CDCBM9","type":"related"},{"name":"CORTICAL DYSPLASIA, COMPLEX, WITH OTHER BRAIN MALFORMATIONS 9","type":"related"}],"termid":"MONDO:0032578","xrefs":{"Monarch":{"xref_id":"0032578"}}}


id: PBO:0049996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeodomain interacting protein kinase 2","termid":"PBO:0049996"}


id: GO:2000027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of animal organ morphogenesis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of animal organ morphogenesis","synonyms":[{"name":"regulation of histogenesis and organogenesis","type":"related"}],"termid":"GO:2000027"}


id: MONDO:0002937
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal cell carcinoma of the skin that often appears as elevated nodules which may become ulcerated.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"nodular basal cell carcinoma","secondary_identifiers":["NCIT:C5568","MEDGEN:908229","UMLS:C4083056","DOID:4280","SCTID:403910009"],"synonyms":[{"name":"Nodulo-ulcerative basal cell carcinoma","type":"exact"},{"name":"Rodent Ulcer","type":"exact"},{"name":"basal cell carcinoma, nodular","type":"exact"},{"name":"basal cell carcinoma, nodular (morphologic abnormality)","type":"exact"},{"name":"circumscribed solid basal cell carcinoma","type":"exact"},{"name":"skin nodulo-ulcerative basal cell carcinoma","type":"exact"},{"name":"skin solid (nodular) basal cell carcinoma","type":"exact"}],"termid":"MONDO:0002937","xrefs":{"Monarch":{"xref_id":"0002937"}}}


id: PBO:0035803
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_glutamate-ammonia_ligase_activity_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0035803"}


id: GO:0106201
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of amino acids and peptides linked to the hydrolysis of a diphosphate.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on amino acids and peptides linked to the hydrolysis of a diphosphate (obsolete GO:0106201)","termid":"GO:0106201"}


id: PBO:0046219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 12","termid":"PBO:0046219"}


id: PBO:0089501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Ace2","termid":"PBO:0089501"}


id: PBO:0074933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 100","termid":"PBO:0074933"}


id: PBO:0048778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine monophosphate synthase","termid":"PBO:0048778"}


id: GO:1904387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a L-phenylalanine derivative stimulus.","definition_xrefs":["GOC:TermGenie","PMID:12112407","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"response to L-phenylalanine derivative","termid":"GO:1904386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to L-phenylalanine derivative","termid":"GO:1904387"}


id: PR:O14357
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gpi1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosaminyl-phosphatidylinositol biosynthetic protein gpi1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC30D10.11","synonyms":[{"name":"Spom972h-gpi1","type":"exact"}],"termid":"PR:O14357"}


id: MONDO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphopenic hypergammaglobulinemia, antibody deficiency, autoimmune hemolytic anemia, and glomerulonephritis","secondary_identifiers":["OMIM:247800","UMLS:C1855470","MEDGEN:340877","MESH:C565427"],"synonyms":[{"name":"lymphopenic hypergammaglobulinemia, antibody deficiency, autoimmune hemolytic anemia, and glomerulonephritis","type":"exact"}],"termid":"MONDO:0009541","xrefs":{"Monarch":{"xref_id":"0009541"}}}


id: GO:0052557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the immune response of the symbiont organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of symbiont immune response (obsolete GO:0052557)","synonyms":[{"name":"positive regulation by organism of symbiont immune response","type":"exact"}],"termid":"GO:0052557"}


id: PBO:0080718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat and SOCS box containing 2","termid":"PBO:0080718"}


id: PBO:0084729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein with similarity to Mdm31p; required for normal mitochondrial morphology and inheritance; interacts genetically with MMM1, MDM10, MDM12, and MDM34; variation between SK1 and S288C at residues 182 and 262 impacts invasive growth and mitochondrial network structure","termid":"PBO:0084729"}


id: MONDO:0850074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unilambdoid craniosynostosis","secondary_identifiers":["Orphanet:620113","GARD:22471","MEDGEN:1842908","UMLS:C5680402"],"termid":"MONDO:0850074","xrefs":{"Monarch":{"xref_id":"0850074"}}}


id: GO:0071801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of podosome assembly.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"podosome assembly","termid":"GO:0071800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of podosome assembly","termid":"GO:0071801"}


id: PBO:0047880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, BrdU type, common, fra(5)(p13)","termid":"PBO:0047880"}


id: PBO:0062337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 76","termid":"PBO:0062337"}


id: PBO:0005180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation elongation factor 2 (EF-2) Eft2,B","termid":"PBO:0005180"}


id: GO:0035560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pheophorbide a + H2O = pyropheophorbide a + methanol + CO2. The reaction occurs in two steps; pheophoridase catalyzes the conversion of pheophorbide a to a precursor of pyropheophorbide a, C-13(2)-carboxylpyropheophorbide a, by demethylation, and then the precursor is decarboxylated non-enzymatically to yield pyropheophorbide a.","definition_xrefs":["RHEA:32483","PMID:16228561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"pheophorbidase activity","secondary_identifiers":["EC:3.1.1.82"],"synonyms":[{"name":"PPD activity","type":"related"},{"name":"phedase activity","type":"related"},{"name":"pheophoridase activity","type":"related"}],"termid":"GO:0035560"}


id: PBO:0084901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial tRNA:pseudouridine synthase; acts at positions 27 and 28, but not at position 72; efficiently and rapidly targeted to mitochondria, specifically dedicated to mitochondrial tRNA modification; mutation also affects pseudouridylation of some nuclear-encoded mRNAs; PUS2 has a paralog, PUS1, that arose from the whole genome duplication","termid":"PBO:0084901"}


id: GO:1902198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 3-methylbut-2-enoyl-CoA(4-).","definition_xrefs":["PMID:11231285","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty-acyl-CoA metabolic process","termid":"GO:0035337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086","GO:0006629","GO:0006790"],"is_obsolete":false,"name":"3-methylbut-2-enoyl-CoA(4-) metabolic process","synonyms":[{"name":"3-methylbut-2-enoyl-CoA(4-) metabolism","type":"exact"}],"termid":"GO:1902198"}


id: PBO:0067372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 473, pseudogene","termid":"PBO:0067372"}


id: MONDO:0011250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, macrotia, and intellectual disability","secondary_identifiers":["MEDGEN:355403","OMIM:602555","MESH:C566525","UMLS:C1865204"],"synonyms":[{"name":"microcephaly, macrotia, and intellectual disability","type":"exact"},{"name":"microcephaly, macrotia, and mental retardation","type":"exact"}],"termid":"MONDO:0011250","xrefs":{"Monarch":{"xref_id":"0011250"}}}


id: PBO:0087676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the mitochondrial alpha-ketoglutarate dehydrogenase; recruits E3 subunit (Lpd1p) to the E1-E2 (Kgd1p, Kgd2p) core; exists in two forms derived from a single mRNA translated from two alternative start sites; has similarity to human mitochondrial ribosomal protein MRP-S36","termid":"PBO:0087676"}


id: MONDO:0009693
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89337],"is_not":false,"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A bone marrow-based plasma cell neoplasm characterized by a serum monoclonal protein and skeletal destruction with osteolytic lesions, pathological fractures, bone pain, hypercalcemia, and anemia. Clinical variants include non-secretory myeloma, smoldering myeloma, indolent myeloma, and plasma cell leukemia. (WHO, 2001)","definition_xrefs":["NCIT:C3242"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system cancer","termid":"MONDO:0000621"},{"relation_name":"is_a","term_name":"plasma cell neoplasm","termid":"MONDO:0004959"},{"relation_name":"is_a","term_name":"myeloid neoplasm","termid":"MONDO:0005170"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"plasma cell myeloma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:7108","EFO:0001378","Orphanet:29073","UMLS:C0026764","DOID:9538","ICD9:203.0","icd11.foundation:526287100","MESH:D009101","OMIM:254500","NORD:1469","ICD10CM:C90.0","ICDO:9732/3","MedDRA:10028228","icd11.foundation:1582389689","ONCOTREE:PCM","MEDGEN:10122"],"synonyms":[{"name":"Al amyloidosis","type":"related"},{"name":"Kahler disease","type":"exact"},{"name":"Kahler's disease","type":"exact"},{"name":"Multiple Myeloma","type":"exact"},{"name":"amyloidosis, systemic","type":"related"},{"name":"medullary plasmacytoma","type":"exact"},{"name":"multiple myeloma","type":"exact"},{"name":"multiple myeloma, resistance to, Somatic mutation","type":"exact"},{"name":"multiple myeloma, susceptibility to, Somatic mutation","type":"exact"},{"name":"multiple myeloma/plasma cell myeloma","type":"exact"},{"name":"myeloid neoplasm of plasma cell","type":"exact"},{"name":"myeloma","type":"exact"},{"name":"myeloma - multiple","type":"related"},{"name":"myeloma, multiple","type":"exact"},{"name":"myeloma, plasma cell, malignant","type":"exact"},{"name":"myelomatosis","type":"exact"},{"name":"plasma cell myeloid neoplasm","type":"exact"},{"name":"plasma cell myeloma","type":"exact"}],"termid":"MONDO:0009693","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0009693"}}}


id: MONDO:0035337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neurologic disease characterized by the presence of Duane retraction syndrome (i. e. a congenital cranial dysinnervation disorder with unilateral or bilateral limitation of abduction and/or adduction of the eye, as well as globe retraction and palpebral fissure narrowing on attempted adduction) in combination with congenital unilateral or bilateral hearing loss. The sidedness of hearing loss corresponds to the sidedness of the retraction syndrome.","definition_xrefs":["Orphanet:529574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Duane retraction syndrome","termid":"MONDO:0007473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Duane retraction syndrome with congenital deafness","secondary_identifiers":["UMLS:C5680193","GARD:17968","MEDGEN:1804304"],"synonyms":[{"name":"DRS with deafness","type":"exact"},{"name":"DRS with hearing loss","type":"exact"},{"name":"DURS with deafness","type":"exact"},{"name":"DURS with hearing loss","type":"exact"},{"name":"Duane retraction syndrome with congenital hearing loss","type":"exact"}],"termid":"MONDO:0035337","xrefs":{"Monarch":{"xref_id":"0035337"}}}


id: PBO:0053179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LEM domain nuclear envelope protein 2","termid":"PBO:0053179"}


id: GO:0061546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a tyramine by a cell in which the tyramine acts as a neurotransmitter.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amine secretion, neurotransmission","termid":"GO:0061532"},{"relation_name":"is_a","term_name":"tyramine secretion","termid":"GO:0061545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"tyramine secretion, neurotransmission","termid":"GO:0061546"}


id: MONDO:0006075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign soft tissue lesion arising from the adrenal gland. It is composed of mature adipose and hematopoietic/lymphoid tissues.","definition_xrefs":["NCIT:C3736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm of adrenal gland","termid":"MONDO:0021511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal gland myelolipoma","secondary_identifiers":["UMLS:C0206635","MESH:D018209","ICDO:8870/0","MEDGEN:64623","EFO:1000074","SCTID:719049003"],"synonyms":[{"name":"MYELOLIPOMA, benign","type":"exact"},{"name":"Myelolipoma","type":"exact"},{"name":"adrenal gland myelolipoma","type":"exact"}],"termid":"MONDO:0006075","xrefs":{"Monarch":{"xref_id":"0006075"}}}


id: PR:C6Y4A8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23D3.16 gene.","definition_xrefs":["UniProtKB:C6Y4A8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23D3.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23D3.16","synonyms":[{"name":"Spom972h-SPAC23D3.16","type":"exact"}],"termid":"PR:C6Y4A8"}


id: PBO:0041776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 15","termid":"PBO:0041776"}


id: GO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of antifungal peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antimicrobial peptide production","termid":"GO:0002785"},{"relation_name":"is_a","term_name":"regulation of antifungal peptide production","termid":"GO:0002788"},{"relation_name":"negatively_regulates","term_name":"antifungal peptide production","termid":"GO:0002781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of antifungal peptide production","synonyms":[{"name":"down regulation of antifungal peptide production","type":"exact"},{"name":"down-regulation of antifungal peptide production","type":"exact"},{"name":"downregulation of antifungal peptide production","type":"exact"},{"name":"inhibition of antifungal peptide production","type":"narrow"}],"termid":"GO:0002789"}


id: GO:0047467
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (E)-4-hydroxyphenylacetaldehyde oxime = (Z)-4-hydroxyphenylacetaldehyde oxime.","definition_xrefs":["MetaCyc:5.2.1.11-RXN","EC:5.2.1.11"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-hydroxyphenylacetaldehyde-oxime isomerase activity (obsolete GO:0047467)","termid":"GO:0047467"}


id: GO:0030861
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of polarized epithelial cell differentiation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell differentiation","termid":"GO:0030857"},{"relation_name":"is_a","term_name":"regulation of polarized epithelial cell differentiation","termid":"GO:0030860"},{"relation_name":"negatively_regulates","term_name":"polarized epithelial cell differentiation","termid":"GO:0030859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of polarized epithelial cell differentiation","synonyms":[{"name":"down regulation of polarized epithelial cell differentiation","type":"exact"},{"name":"down-regulation of polarized epithelial cell differentiation","type":"exact"},{"name":"downregulation of polarized epithelial cell differentiation","type":"exact"},{"name":"inhibition of polarized epithelial cell differentiation","type":"narrow"}],"termid":"GO:0030861"}


id: PBO:0046646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 27","termid":"PBO:0046646"}


id: PBO:0066293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member U, pseudogene","termid":"PBO:0066293"}


id: MONDO:0008849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis pilaris atrophicans","termid":"MONDO:0018855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"atrophoderma vermiculata","secondary_identifiers":["OMIM:209700","DOID:0080756","Orphanet:79100","UMLS:C0263429","SCTID:2736005","MEDGEN:82666","GARD:9744","ICD9:701.8"],"synonyms":[{"name":"Atrophodermia reticulata","type":"related"},{"name":"Atrophodermia reticulata symmetrica faciei","type":"related"},{"name":"Atrophodermia vermiculata","type":"related"},{"name":"atrophoderma vermiculata","type":"exact"},{"name":"atrophoderma vermiculatum","type":"related"},{"name":"ava","type":"related"},{"name":"folliculitis ulerythematosa","type":"related"},{"name":"folliculitis ulerythematosa reticulata","type":"related"},{"name":"folliculitis ulerythematosa reticulate","type":"exact"},{"name":"honeycomb atrophy","type":"related"}],"termid":"MONDO:0008849","xrefs":{"Monarch":{"xref_id":"0008849"}}}


id: _global:level_fluctuates_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification site occupancy is observed to vary.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"level_fluctuates_during","synonyms":[{"name":"occupancy_fluctuates_during","type":"exact"}],"termid":"_global:level_fluctuates_during"}


id: PBO:0017945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding methyltransferase Abp140 (predicted)","termid":"PBO:0017945"}


id: GO:1990176
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex involved in maltose transport through the plasma membrane. In E. coli, the complex is a tetramer and consists of a cytoplasmic ATPase MalK homodimer together with a heterodimeric transmembrane subunit MalF-MalG.","definition_xrefs":["PMID:19250913","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"maltose transport complex","termid":"GO:1990060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MalFGK2 complex","synonyms":[{"name":"MalF-MalG-MalK(2) complex","type":"exact"},{"name":"MalF-MalG-MalK-MalK complex","type":"exact"},{"name":"MalFGK(2) complex","type":"exact"},{"name":"maltose transport MalFGK2 complex","type":"exact"},{"name":"maltose transport complex, core subunit","type":"exact"}],"termid":"GO:1990176"}


id: PR:O74215
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A triokinase/FMN cyclase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00019","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.16c","secondary_identifiers":["UniProtKB:O74215"],"synonyms":[{"name":"DHA kinase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-TKFC","type":"exact"},{"name":"glycerone kinase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"triokinase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"triose kinase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74215"}


id: MONDO:0018434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia with t(9;11)(p22;q23)","secondary_identifiers":["GARD:21711","MEDGEN:753997","Orphanet:402017","UMLS:C2919692"],"synonyms":[{"name":"AML with t(9;11)(p22;q23)","type":"exact"}],"termid":"MONDO:0018434","xrefs":{"Monarch":{"xref_id":"0018434"}}}


id: GO:0099623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a change in membrane potential in the polarizing direction towards the resting potential in a cardiomyocyte.","definition_xrefs":["GOC:dos","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane repolarization","termid":"GO:0060306"},{"relation_name":"regulates","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell membrane repolarization","synonyms":[{"name":"heart repolarization","type":"related"},{"name":"regulation of cardiac muscle cell repolarization","type":"exact"},{"name":"regulation of cardiomyocyte membrane repolarization","type":"exact"}],"termid":"GO:0099623"}


id: PBO:0002842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme Ubc14 (predicted)","termid":"PBO:0002842"}


id: PBO:0064849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP1R14B antisense RNA 1","termid":"PBO:0064849"}


id: GO:0036315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sterol stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to sterol","termid":"GO:0036314"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sterol","termid":"GO:0036315"}


id: PBO:0031571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_small_vegetative_cell","termid":"PBO:0031571"}


id: MOD:01856
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by rearrangement and condensation of a cysteine with the carbonyl of the preceding residue to form a 1,3-oxazole-4-carbothionic acid.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues","termid":"MOD:01419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"}


id: PBO:0077273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 14B","termid":"PBO:0077273"}


id: PBO:0040044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 2/3 complex subunit 1A","termid":"PBO:0040044"}


id: PBO:0061719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT family member 2D","termid":"PBO:0061719"}


id: PBO:0048288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin like peptide","termid":"PBO:0048288"}


id: MONDO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inability to efficiently utilize and/or sustain binocular vision.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"strabismus","termid":"MONDO:0003432"},{"relation_name":"is_a","term_name":"vision disorder","termid":"MONDO:0021084"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"binocular vision disease","secondary_identifiers":["SCTID:83275001","EFO:0009535","UMLS:C0005461","MEDGEN:571","DOID:12667","NCIT:C34422","ICD9:368.30"],"synonyms":[{"name":"binocular vision disorder","type":"exact"},{"name":"simultaneous visual perception without fusion","type":"narrow"}],"termid":"MONDO:0001564","xrefs":{"Monarch":{"xref_id":"0001564"}}}


id: _global:spatially_disjoint_from
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"A is spatially_disjoint_from B if and only if they have no parts in common","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"_global:mereotopologically_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spatially_disjoint_from","secondary_identifiers":["RO:0002163"],"termid":"_global:spatially_disjoint_from"}


id: GO:0042713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expulsion of seminal fluid, thick white fluid containing spermatozoa, from the male genital tract.","definition_xrefs":["GOC:jl","PMID:26385403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal reproductive process","termid":"GO:0048609"},{"relation_name":"part_of","term_name":"insemination","termid":"GO:0007320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm ejaculation","termid":"GO:0042713"}


id: PBO:0074830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 26","termid":"PBO:0074830"}


id: PBO:0089755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate 1-dehydrogenase","termid":"PBO:0089755"}


id: PBO:0045618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 29 (pseudogene)","termid":"PBO:0045618"}


id: PBO:0039240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member A1","termid":"PBO:0039240"}


id: PBO:0088916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase/ lysophospholipase fusion protein Dfr1","termid":"PBO:0088916"}


id: GO:1902025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitrate into a cell or organelle.","definition_xrefs":["PMID:22658680","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nitrate import","synonyms":[{"name":"nitrate influx","type":"exact"},{"name":"nitrate uptake","type":"exact"}],"termid":"GO:1902025"}


id: PBO:0045380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DPP3 pseudogene 1","termid":"PBO:0045380"}


id: GO:0031322
data:
  {"annotated_genes":["SJAG_04010","SJAG_04901","SJAG_04271","SJAG_02529","SJAG_02248","SJAG_00405","SJAG_03746","SJAG_05309","SJAG_00486","SJAG_01483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94301,98880,99564,101850,101851,104936,106145,108865,109751,115989],"is_not":false,"summary":null,"term":"GO:0031322"}]},"cv_name":"biological_process","definition":"A spindle pole body (SPB) organization process that takes place during the second meiotic division during ascospore formation and results in the structural reorganization of the SPB; includes the recruitment of sporulation-specific proteins to the outer plaque to form the meiotic outer plaque (MOP).","definition_xrefs":["PMID:14702385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"part_of","term_name":"ascospore-type prospore assembly","termid":"GO:0031321"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_00486":null,"SJAG_01483":null,"SJAG_02248":null,"SJAG_02529":null,"SJAG_03746":null,"SJAG_04010":null,"SJAG_04271":null,"SJAG_04901":null,"SJAG_05309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030437"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0044085","GO:0007049","GO:0000226","GO:0030437","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"ascospore-type prospore-specific spindle pole body remodeling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ascospore-type prospore-specific spindle pole body modification","type":"related"},{"name":"ascospore-type prospore-specific spindle pole body remodelling","type":"exact"},{"name":"forespore specific spindle pole body remodeling","type":"exact"},{"name":"forespore-specific spindle pole body remodeling","type":"exact"},{"name":"prospore-specific spindle pole body remodeling","type":"exact"},{"name":"sporulation-specific spindle pole body remodeling","type":"exact"}],"termid":"GO:0031322","terms_by_termid":{"GO:0031322":null}}


id: PBO:0047576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor receptor 1","termid":"PBO:0047576"}


id: PBO:0063660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase family member 4 pseudogene 1","termid":"PBO:0063660"}


id: GO:0005700
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of chromosome in a polyploid cell, formed when multiple copies of homologous chromosomes are aligned side by side to give a giant chromosome in which distinct chromosome bands are readily visible.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"polytene chromosome","secondary_identifiers":["Wikipedia:Polytene_chromosome"],"termid":"GO:0005700"}


id: PBO:0120242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthase related protein","termid":"PBO:0120242"}


id: GO:0043859
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolytic cleavage of multi-L-arginyl-poly-L-aspartic acid (cyanophycin; a water-insoluble reserve polymer) into aspartate-arginine dipeptides.","definition_xrefs":["PMID:10429200"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanophycinase activity (obsolete GO:0043859)","synonyms":[{"name":"cyanophycinase activity","type":"exact"}],"termid":"GO:0043859"}


id: PBO:0042675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 9","termid":"PBO:0042675"}


id: PBO:0113423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase subunit ABC10-alpha, found in RNA pol I, II, and III; relocalizes from nucleolus to cytoplasm upon DNA replication stress; localizes to the peroxisome in a Pex5p-dependent manner","termid":"PBO:0113423"}


id: PBO:0003674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional coactivator, multiprotein bridging factor Mbf1 (predicted)","termid":"PBO:0003674"}


id: PBO:0017507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human DDB1 and CUL4-associated factor 4 ortholog Wdr21","termid":"PBO:0017507"}


id: PBO:0074457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphingomyelin phosphodiesterase 2","termid":"PBO:0074457"}


id: GO:0038085
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vascular endothelial growth factor.","definition_xrefs":["PMID:17470632"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth factor binding","termid":"GO:0019838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"vascular endothelial growth factor binding","synonyms":[{"name":"VEGF binding","type":"exact"}],"termid":"GO:0038085"}


id: PR:O94282
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytoplasmic tRNA 2-thiolation protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03335","PANTHER:PTHR11807:SF3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic tRNA 2-thiolation protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G5.03","secondary_identifiers":["UniProtKB:O94282"],"synonyms":[{"name":"Spom972h-CTU1","type":"exact"},{"name":"cytoplasmic tRNA adenylyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94282"}


id: PBO:0087765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TORC2 (Tor2p-Lst8p-Avo1-Avo2-Tsc11p-Bit61p); TORC2 is a membrane-associated complex that regulates actin cytoskeletal dynamics during polarized growth and cell wall integrity; involved in sphingolipid metabolism; contains a RasGEFN domain","termid":"PBO:0087765"}


id: GO:0043665
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The soluble material inside the peribacteroid membrane, but outside of the bacteroid, within a bacteroid-containing symbiosome of a host cell.","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"},{"relation_name":"part_of","term_name":"host bacteroid-containing symbiosome","termid":"GO:0043663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host peribacteroid fluid","termid":"GO:0043665"}


id: MONDO:0010025
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-obesity syndrome","secondary_identifiers":["MESH:C564821","MEDGEN:341410","OMIM:269870","UMLS:C1849235"],"synonyms":[{"name":"SSOS","type":"related"},{"name":"short stature-obesity syndrome","type":"exact"}],"termid":"MONDO:0010025","xrefs":{"Monarch":{"xref_id":"0010025"}}}


id: PBO:0111646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Bur6","termid":"PBO:0111646"}


id: PBO:0051279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-12","termid":"PBO:0051279"}


id: PBO:0044733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 18 pseudogene 1","termid":"PBO:0044733"}


id: MOD:01773
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Covalent modification of a trimethyllysine residue with secondary loss of a neutral trimethylamine molecular fragment.","definition_xrefs":["PubMed:17205979","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"N6,N6,N6-trimethyl-L-lysine","termid":"MOD:00083"},{"relation_name":"is_a","term_name":"modified residue with a secondary neutral loss","termid":"MOD:00431"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6,N6,N6-trimethyl-L-lysine with neutral loss of trimethylamine","synonyms":[{"name":"dMe3N6Me3+Lys","type":"exact"}],"termid":"MOD:01773"}


id: GO:1902915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein polyubiquitination.","definition_xrefs":["GOC:di","GO_REF:0000058","GOC:TermGenie","PMID:23645667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein ubiquitination","termid":"GO:0031397"},{"relation_name":"is_a","term_name":"regulation of protein polyubiquitination","termid":"GO:1902914"},{"relation_name":"negatively_regulates","term_name":"protein polyubiquitination","termid":"GO:0000209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"negative regulation of protein polyubiquitination","synonyms":[{"name":"down regulation of polyubiquitin","type":"related"},{"name":"down regulation of protein polyubiquitination","type":"exact"},{"name":"down regulation of protein polyubiquitinylation","type":"exact"},{"name":"down regulation of protein polyubiquitylation","type":"exact"},{"name":"down-regulation of polyubiquitin","type":"related"},{"name":"down-regulation of protein polyubiquitination","type":"exact"},{"name":"down-regulation of protein polyubiquitinylation","type":"exact"},{"name":"down-regulation of protein polyubiquitylation","type":"exact"},{"name":"downregulation of polyubiquitin","type":"related"},{"name":"downregulation of protein polyubiquitination","type":"exact"},{"name":"downregulation of protein polyubiquitinylation","type":"exact"},{"name":"downregulation of protein polyubiquitylation","type":"exact"},{"name":"inhibition of polyubiquitin","type":"related"},{"name":"inhibition of protein polyubiquitination","type":"narrow"},{"name":"inhibition of protein polyubiquitinylation","type":"narrow"},{"name":"inhibition of protein polyubiquitylation","type":"narrow"},{"name":"negative regulation of polyubiquitin","type":"related"},{"name":"negative regulation of protein polyubiquitinylation","type":"exact"},{"name":"negative regulation of protein polyubiquitylation","type":"exact"}],"termid":"GO:1902915"}


id: PBO:0002320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Obg-Like ATPase (predicted)","termid":"PBO:0002320"}


id: PR:P36591
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dfr1 gene.","definition_xrefs":["UniProtKB:P36591","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1223.08c","synonyms":[{"name":"Spom972h-dfr1","type":"exact"}],"termid":"PR:P36591"}


id: GO:0072688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a SHREC complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"SHREC complex localization","synonyms":[{"name":"SHREC complex localisation","type":"exact"},{"name":"establishment and maintenance of SHREC complex localization","type":"exact"}],"termid":"GO:0072688"}


id: MONDO:0017643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete frontotemporal neurodegeneration with movement disorder (obsolete MONDO:0017643)","secondary_identifiers":["Orphanet:306708"],"termid":"MONDO:0017643","xrefs":{"Monarch":{"xref_id":"0017643"}}}


id: GO:1902051
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to (25S)-Delta(4)-dafachronate.","definition_xrefs":["GOC:TermGenie","PMID:16529801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"(25S)-Delta(4)-dafachronate binding","termid":"GO:1902051"}


id: GO:0050153
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10-hydroxydecanoate + NAD+ = 10-oxodecanoate + H+ + NADH.","definition_xrefs":["EC:1.1.1.66","RHEA:20880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"omega-hydroxydecanoate dehydrogenase activity","secondary_identifiers":["MetaCyc:OMEGA-HYDROXYDECANOATE-DEHYDROGENASE-RXN","KEGG_REACTION:R03886"],"synonyms":[{"name":"10-hydroxydecanoate:NAD+ 10-oxidoreductase activity","type":"related"},{"name":"w-hydroxydecanoate dehydrogenase activity","type":"exact"}],"termid":"GO:0050153"}


id: PBO:0064195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A and acyltransferase 3","termid":"PBO:0064195"}


id: PBO:0054442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1839","termid":"PBO:0054442"}


id: FYPO:0002730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the total amount of DNA in a cell is greater than normal when the cell is in a culture in stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA content increased","termid":"FYPO:0002729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"DNA content increased during stationary phase","synonyms":[{"name":"increased DNA content during stationary phase","type":"exact"},{"name":"increased DNA level during stationary phase","type":"exact"}],"termid":"FYPO:0002730"}


id: PBO:0077346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 87A","termid":"PBO:0077346"}


id: MONDO:0850371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A coronary artery disease that is characterized by atherosclerotic plaque that would not be expected to obstruct blood flow or result in anginal symptoms and stenosis of coronary artery less than 50 percent.","definition_xrefs":["DOID:0080938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coronary artery disorder","termid":"MONDO:0005010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"nonobstructive coronary artery disease","termid":"MONDO:0850371","xrefs":{"Monarch":{"xref_id":"0850371"}}}


id: PBO:0035974
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_acetaldehyde","termid":"PBO:0035974"}


id: PATO:0001725
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male receptivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male receptivity","termid":"PATO:0001721"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased male receptivity","synonyms":[{"name":"high male receptivity","type":"exact"}],"termid":"PATO:0001725"}


id: PBO:0027242
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_nucleolus_inheritance","termid":"PBO:0027242"}


id: MONDO:1011353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Radiculitis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiculitis, non-human animal","termid":"MONDO:1011353","xrefs":{"Monarch":{"xref_id":"1011353"}}}


id: PBO:0065750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyrin domain containing 2","termid":"PBO:0065750"}


id: PBO:0059951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 37","termid":"PBO:0059951"}


id: FYPO:0001184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of maltose alpha-glucosidase (also known as maltase) activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal alpha-glucosidase activity","termid":"FYPO:0001183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal maltase activity","synonyms":[{"name":"abnormal maltose alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001184"}


id: GO:0009656
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Pigment-protein complex primarily associated to PSII in plants, green algae and cyanobacteria. Involved in state transitions that cause migration to PSI under certain environmental conditions such as high light.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chloroplast thylakoid membrane protein complex","termid":"GO:0098807"},{"relation_name":"part_of","term_name":"PSII associated light-harvesting complex II","termid":"GO:0009517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"PSII associated light-harvesting complex II, peripheral complex","termid":"GO:0009656"}


id: PATO:0001999
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The bearer of this quality has_part < n of the indicated entity type, where n is the normal amount for a comparable organism. Note that the bearer of the quality is the whole, not the part. Formally: If a bearer entity e has fewer parts of type X at time t, then the number of instances x of X at t such that x part_of e is < n, where n is either the normal number for comparable entities, or n is stated explicitly. This case includes the limit case, where the bearer lacks all parts of the specified type.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered number of","termid":"PATO:0002083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lacks parts or has fewer parts of type","synonyms":[{"name":"loss of","type":"exact"}],"termid":"PATO:0001999"}


id: PBO:0108989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilizer of axonemal microtubules 5","termid":"PBO:0108989"}


id: MONDO:0002137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"noninfectious dermatoses of eyelid","secondary_identifiers":["MEDGEN:509831","DOID:1894","UMLS:C0155176","ICD10CM:H01.1","ICD9:373.3","SCTID:111524003","icd11.foundation:849793428"],"synonyms":[{"name":"non-infected eyelid dermatoses","type":"exact"}],"termid":"MONDO:0002137","xrefs":{"Monarch":{"xref_id":"0002137"}}}


id: GO:2000787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"is_a","term_name":"regulation of blood vessel endothelial cell differentiation","termid":"GO:0110057"},{"relation_name":"regulates","term_name":"venous endothelial cell fate commitment","termid":"GO:0060845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of venous endothelial cell fate commitment","termid":"GO:2000787"}


id: GO:0060829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of the Wnt signaling pathway through beta-catenin in the anterior end of the neural plate. This regulation sets up a Wnt signaling gradient along the anterior/posterior axis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of canonical Wnt signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060829)","synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway through beta-catenin involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signaling pathway involved in neural plate anterior/posterior pattern","type":"exact"},{"name":"negative regulation of canonical Wnt receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"},{"name":"negative regulation of canonical Wnt-activated signaling pathway involved in neural plate anterior/posterior pattern","type":"exact"}],"termid":"GO:0060829"}


id: PBO:0064451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POF1B actin binding protein","termid":"PBO:0064451"}


id: PBO:0039124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIFM1 pseudogene 1","termid":"PBO:0039124"}


id: PBO:0069334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 593, pseudogene","termid":"PBO:0069334"}


id: PBO:0029785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_septated_vegetative_cell_with_abnormal_cell_morphology","termid":"PBO:0029785"}


id: GO:0010959
data:
  {"annotated_genes":["SJAG_03631","SJAG_04551","SJAG_00296"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93227,115419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[104162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of metal ion transport. Metal ion transport is the directed movement of metal ions, any metal ion with an electric charge, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transport","termid":"GO:0043269"},{"relation_name":"regulates","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of metal ion transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010959","terms_by_termid":{"GO:1905665":null,"GO:1905949":null}}


id: GO:0052435
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of symbiont MAP kinase-mediated signal transduction pathways during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of defense-related symbiont MAP kinase-mediated signal transduction pathway (obsolete GO:0052435)","synonyms":[{"name":"modulation of defense-related symbiont MAPK-mediated signal transduction pathway by organism","type":"exact"},{"name":"modulation of defense-related symbiont mitogen activated protein kinase-mediated signal transduction pathway by organism","type":"exact"}],"termid":"GO:0052435"}


id: PBO:0068896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 138, pseudogene","termid":"PBO:0068896"}


id: GO:0048504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of animal organ formation at a consistent predetermined time point during development.","definition_xrefs":["GOC:dph","GOC:bf","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ formation","termid":"GO:0003156"},{"relation_name":"is_a","term_name":"regulation of development, heterochronic","termid":"GO:0040034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of timing of animal organ formation","synonyms":[{"name":"timing of organ biosynthesis","type":"related"},{"name":"timing of organ formation","type":"related"}],"termid":"GO:0048504"}


id: PBO:0049649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 3","termid":"PBO:0049649"}


id: PBO:0031342
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_hydroxyurea","termid":"PBO:0031342"}


id: GO:0044800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The membrane organization process that joins two lipid bilayers to form a single membrane, involving more than one organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism membrane fusion (obsolete GO:0044800)","termid":"GO:0044800"}


id: MONDO:0013088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"follicular lymphoma","termid":"MONDO:0018906"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular lymphoma, susceptibility to, 1","secondary_identifiers":["MEDGEN:442784","OMIM:613024","UMLS:C2751665"],"synonyms":[{"name":"FL1","type":"exact"},{"name":"follicular lymphoma, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0013088","xrefs":{"Monarch":{"xref_id":"0013088"}}}


id: GO:0060735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of eIF2 alpha phosphorylation as a cellular response to double-stranded RNA.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein phosphorylation","termid":"GO:0001932"},{"relation_name":"is_a","term_name":"regulation of translational initiation","termid":"GO:0006446"},{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"part_of","term_name":"cellular response to dsRNA","termid":"GO:0071359"},{"relation_name":"regulates","term_name":"regulation of translational initiation by eIF2 alpha phosphorylation","termid":"GO:0010998"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of eIF2 alpha phosphorylation by dsRNA","synonyms":[{"name":"regulation of eIF2 alpha phosphorylation by PKR","type":"narrow"},{"name":"regulation of eIF2 alpha phosphorylation by double-stranded RNA","type":"exact"}],"termid":"GO:0060735"}


id: PBO:0089762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,6- mannanase","termid":"PBO:0089762"}


id: GO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A macromolecular complex containing protein, DNA, and RNA molecules.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein-DNA-RNA complex","termid":"GO:0001114"}


id: GO:0140598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to and carrying a lipoprotein between two different cellular locations by moving along with the target lipoprotein.","definition_xrefs":["PMID:7628437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140104"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140597"}],"interesting_parent_ids":["GO:0003674","GO:0140597","GO:0140104"],"is_obsolete":false,"name":"lipoprotein carrier activity","termid":"GO:0140598"}


id: PBO:0075743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 68 pseudogene 2","termid":"PBO:0075743"}


id: MONDO:0007536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital lobar emphysema (CLE) is a respiratory abnormality characterized by respiratory distress due to hyperinflation of one or more affected lobes of the lung.","definition_xrefs":["Orphanet:1928"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital lobar emphysema","secondary_identifiers":["OMIM:130710","SCTID:66987001","icd11.foundation:685349915","GARD:2104","MESH:C535735","MEDGEN:120557","UMLS:C0265797","MedDRA:10010456","NORD:1085","NCIT:C98895"],"synonyms":[{"name":"CLE","type":"exact"},{"name":"Emphysema, Congenital Lobar","type":"exact"},{"name":"congenital lobar hyperinflation","type":"exact"},{"name":"emphysema, congenital lobar","type":"exact"},{"name":"infantile lobar hyperinflation","type":"exact"}],"termid":"MONDO:0007536","xrefs":{"Monarch":{"xref_id":"0007536"}}}


id: PBO:0082686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the GARP (Golgi-associated retrograde protein) complex; GARP is required for the recycling of proteins from endosomes to the late Golgi, and for mitosis after DNA damage induced checkpoint arrest; links the (VFT/GARP) complex to the SNARE Tlg1p; members of the GARP complex are Vps51p-Vps52p-Vps53p-Vps54p","termid":"PBO:0082686"}


id: PBO:0062457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 130 pseudogene","termid":"PBO:0062457"}


id: PR:Q9Y7J3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.07 gene.","definition_xrefs":["UniProtKB:Q9Y7J3","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnosine N-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.07","synonyms":[{"name":"Spom972h-SPBC1778.07","type":"exact"}],"termid":"PR:Q9Y7J3"}


id: GO:1901893
data:
  {"annotated_genes":["SJAG_03048","SJAG_01114","SJAG_03631","SJAG_03704","SJAG_04468","SJAG_05290","SJAG_01188","SJAG_00082","SJAG_00514","SJAG_01805","SJAG_04666","SJAG_03936","SJAG_04776","SJAG_03342"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107209,91880,95815,94428,117534,109078,79886,119955,108416,115421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[92012,104402,95819,112576,89537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell septum assembly.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"is_a","term_name":"regulation of cell septum assembly","termid":"GO:1901891"},{"relation_name":"positively_regulates","term_name":"cell septum assembly","termid":"GO:0090529"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01805":null,"SJAG_03048":null,"SJAG_03342":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell septum assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"activation of cell septum assembly","type":"narrow"},{"name":"up regulation of cell septum assembly","type":"exact"},{"name":"up-regulation of cell septum assembly","type":"exact"},{"name":"upregulation of cell septum assembly","type":"exact"}],"termid":"GO:1901893","terms_by_termid":{"GO:0031031":null,"GO:0140281":null}}


id: PBO:0079873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A regulator of nonsense mediated mRNA decay","termid":"PBO:0079873"}


id: GO:0080024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indolebutyric acid, a compound that serves as an active or storage form of the hormone indole-3-acetic acid (an auxin) in many plants.","definition_xrefs":["PMID:18725356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin metabolic process","termid":"GO:0009850"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"indolebutyric acid metabolic process","synonyms":[{"name":"IBA metabolic process","type":"exact"},{"name":"IBA metabolism","type":"exact"},{"name":"indole-3-butyric acid metabolic process","type":"narrow"}],"termid":"GO:0080024"}


id: PBO:0089961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ domain","termid":"PBO:0089961"}


id: FYPO:0007736
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin along the length of genes that can be transcribed by RNA polymerase II is altered such that more of the protein is present at the 5' end, and less at the 3' end, than normal during metaphase of the mitotic cell cycle.","definition_xrefs":["PMID:33771877","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein distribution along RNA polymerase II-transcribed genes","termid":"FYPO:0006020"},{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin at 3' end of genes","termid":"FYPO:0007733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","synonyms":[{"name":"condensin displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"narrow"},{"name":"decreased protein localization to chromatin at 3' end of RNA polymerase II-transcribed genes during metaphase with increased localization towards 5' end","type":"exact"},{"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase during metaphase of mitotic cell cycle","type":"exact"},{"name":"protein displaced from 3' end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase during vegetative growth","type":"exact"},{"name":"protein displaced from downstream end to 5' end of RNA polymerase II-transcribed genes during mitotic metaphase","type":"exact"}],"termid":"FYPO:0007736"}


id: GO:2000726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cardiac muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of striated muscle cell differentiation","termid":"GO:0051154"},{"relation_name":"is_a","term_name":"negative regulation of cardiocyte differentiation","termid":"GO:1905208"},{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell differentiation","termid":"GO:2000725"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle cell differentiation","synonyms":[{"name":"negative regulation of cardiomyocyte differentiation","type":"exact"},{"name":"negative regulation of heart muscle cell differentiation","type":"related"}],"termid":"GO:2000726"}


id: GO:1990736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the depolarizing direction away from the resting potential in a vascular smooth muscle cell.","definition_xrefs":["PMID:20826763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization","termid":"GO:0051899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vascular associated smooth muscle cell membrane depolarization","synonyms":[{"name":"regulation of vascular smooth muscle cell membrane depolarization","type":"exact"}],"termid":"GO:1990736"}


id: PBO:0068089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 395","termid":"PBO:0068089"}


id: PBO:0083481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene SYM1, a mitochondrial protein involved in ethanol metabolism","termid":"PBO:0083481"}


id: PBO:0003259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S17 (predicted)","termid":"PBO:0003259"}


id: GO:0099644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a presynaptic membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to membrane","termid":"GO:0072657"},{"relation_name":"is_a","term_name":"protein localization to presynapse","termid":"GO:1905383"},{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to presynaptic membrane","synonyms":[{"name":"protein localisation in presynaptic membrane","type":"exact"},{"name":"protein localisation to presynaptic membrane","type":"exact"},{"name":"protein localization in presynaptic membrane","type":"exact"}],"termid":"GO:0099644"}


id: GO:0010880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of release of sequestered calcium ion into cytosol by the sarcoplasmic reticulum, the process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of release of sequestered calcium ion into cytosol","termid":"GO:0051279"},{"relation_name":"regulates","term_name":"release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0014808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","termid":"GO:0010880"}


id: MONDO:0008951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebrocortical degeneration of infancy","secondary_identifiers":["MESH:C565863","UMLS:C1859257","MEDGEN:347837","OMIM:213950"],"synonyms":[{"name":"cerebrocortical degeneration of infancy","type":"exact"}],"termid":"MONDO:0008951","xrefs":{"Monarch":{"xref_id":"0008951"}}}


id: PBO:0041971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC13 antisense RNA 1","termid":"PBO:0041971"}


id: GO:0044432
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the endoplasmic reticulum, the irregular network of unit membranes, visible only by electron microscopy, that occurs in the cytoplasm of many eukaryotic cells. The membranes form a complex meshwork of tubular channels, which are often expanded into slitlike cavities called cisternae.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete endoplasmic reticulum part (obsolete GO:0044432)","synonyms":[{"name":"ER component","type":"exact"}],"termid":"GO:0044432"}


id: GO:0007394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in shape of cells at the dorsal-most (leading) edge of the epidermis from being polygonal to being elongated in the dorsal/ventral axis.","definition_xrefs":["PMID:12147138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"},{"relation_name":"is_a","term_name":"regulation of embryonic cell shape","termid":"GO:0016476"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"initiation of dorsal closure","termid":"GO:0007392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, elongation of leading edge cells","termid":"GO:0007394"}


id: GO:0002424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by a T cell triggered in response to the presence of a tumor cell.","definition_xrefs":["GOC:add","PMID:16730260","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response to tumor cell","termid":"GO:0002418"},{"relation_name":"is_a","term_name":"T cell mediated immunity","termid":"GO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}


id: PBO:0076046
data:
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id: RO:0002131
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x overlaps y if and only if there exists some z such that x has part z and z part of y","direct_ancestors":[{"relation_name":"is_a","term_name":"mereotopologically_related_to","termid":"RO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlaps","termid":"RO:0002131"}


id: MONDO:0021758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Agranulocytosis that is autoimmune in origin.","definition_xrefs":["PMID:443260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agranulocytosis","termid":"MONDO:0001609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acquired agranulocytosis","secondary_identifiers":["GARD:5717","MEDGEN:115995","NORD:743","SCTID:72050006","UMLS:C0235585","MESH:C538171"],"synonyms":[{"name":"Agranulocytosis, Acquired","type":"exact"},{"name":"agranulocytic angina","type":"related"},{"name":"agranulocytosis, acquired","type":"related"},{"name":"granulocytopenia, primary","type":"related"},{"name":"neutropenia, malignant","type":"related"}],"termid":"MONDO:0021758","xrefs":{"Monarch":{"xref_id":"0021758"}}}


id: MONDO:0000496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the bladder resulting in bloody urine.","definition_xrefs":["NCIT:C114666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystitis","termid":"MONDO:0006032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhagic cystitis","secondary_identifiers":["DOID:0050859","MEDGEN:508360","SCTID:87696004","UMLS:C0085692"],"termid":"MONDO:0000496","xrefs":{"Monarch":{"xref_id":"0000496"}}}


id: MONDO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma characterized by the presence of a villous architectural pattern. It may arise from a villous adenoma.","definition_xrefs":["NCIT:C4142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"villous adenocarcinoma","secondary_identifiers":["ICDO:8262/3","DOID:4917","MEDGEN:137741","UMLS:C0334306"],"synonyms":[{"name":"villous adenocarcinoma","type":"exact"},{"name":"villous adenocarcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003204","xrefs":{"Monarch":{"xref_id":"0003204"}}}


id: PR:O36025
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mpd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GYF domain-containing protein mpd2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.13c","synonyms":[{"name":"Spom972h-mpd2","type":"exact"}],"termid":"PR:O36025"}


id: GO:0015226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of carnitine across a membrane. Carnitine is a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"carnitine transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-164967","Reactome:R-HSA-5625674","Reactome:R-HSA-549297","Reactome:R-HSA-165026"],"synonyms":[{"name":"vitamin Bt transporter activity","type":"exact"}],"termid":"GO:0015226"}


id: PBO:0051792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQCH antisense RNA 1","termid":"PBO:0051792"}


id: GO:0044501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in a signal transduction process - a cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell - in a second organism.","definition_xrefs":["GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of signal transduction in another organism (obsolete GO:0044501)","synonyms":[{"name":"modulation of signal transduction in another organism","type":"exact"},{"name":"modulation of signal transduction in other organism","type":"exact"}],"termid":"GO:0044501"}


id: PR:O13701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptr6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13F5.02c","synonyms":[{"name":"Spom972h-ptr6","type":"exact"},{"name":"TAFII-55 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID 55 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13701"}


id: GO:0090411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a brassinosteroid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"brassinosteroid binding","termid":"GO:0090411"}


id: MOD:01794
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the methyl group of a residue containing common isotopes with a 1x(13)C,3x(2)H labeled monomethylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"(13)C labeled residue","termid":"MOD:00842"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,3x(2)H labeled monomethylated residue","synonyms":[{"name":"Methyl:2H(3)13C(1)","type":"related"}],"termid":"MOD:01794"}


id: MONDO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A senile cataract that involves the lens nucleus.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"senile cataract","termid":"MONDO:0004847"},{"relation_name":"is_a","term_name":"nuclear cataract","termid":"MONDO:0045050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nuclear senile cataract","secondary_identifiers":["UMLS:C0271166","MEDGEN:543204","DOID:13963","ICD9:366.16","SCTID:193589009"],"synonyms":[{"name":"Senile nuclear cataract","type":"exact"},{"name":"Senile nuclear sclerosis","type":"exact"},{"name":"lens nucleus senile cataract","type":"exact"},{"name":"senile cataract of lens nucleus","type":"exact"}],"termid":"MONDO:0001847","xrefs":{"Monarch":{"xref_id":"0001847"}}}


id: GO:0015419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + sulfate(out) = ADP + phosphate + sulfate(in).","definition_xrefs":["RHEA:10192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfate transmembrane transporter activity","termid":"GO:0015116"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"ABC-type sulfate transporter activity","secondary_identifiers":["MetaCyc:ABC-70-RXN"],"synonyms":[{"name":"ATPase-coupled sulfate transmembrane transporter activity","type":"related"},{"name":"sulfate ABC transporter","type":"exact"},{"name":"sulfate transmembrane-transporting ATPase activity","type":"related"},{"name":"sulfate-transporting ATPase activity","type":"related"},{"name":"sulfate/thiosulfate porter activity","type":"broad"},{"name":"sulphate transporting ATPase activity","type":"related"}],"termid":"GO:0015419"}


id: MONDO:0100625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dementia beginning in childhood or adolescence. This term denotes a group of conditions that cause early-onset progressive neurocognitive decline.","definition_xrefs":["PMID:37471493","PMID:37806042","PMID:39948021","PMID:39986708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"childhood-onset dementia","synonyms":[{"name":"childhood dementia","type":"exact"},{"name":"pediatric dementia","type":"exact"}],"termid":"MONDO:0100625","xrefs":{"Monarch":{"xref_id":"0100625"}}}


id: PBO:0065802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1A pseudogene 2","termid":"PBO:0065802"}


id: PBO:0027459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_rotenone","termid":"PBO:0027459"}


id: SO:0000315
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The first base where RNA polymerase begins to synthesize the RNA transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"},{"relation_name":"is_a","term_name":"core_promoter_element","termid":"SO:0002309"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSS","synonyms":[{"name":"INSDC_feature:misc_feature","type":"broad"},{"name":"INSDC_note:transcription_start_site","type":"exact"},{"name":"transcription start site","type":"exact"},{"name":"transcription_start_site","type":"exact"}],"termid":"SO:0000315"}


id: PBO:0120453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BACH transcriptional regulator 2","termid":"PBO:0120453"}


id: GO:1904258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a nuclear dicing body.","definition_xrefs":["PMID:25902521","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear body organization","termid":"GO:0030575"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"nuclear dicing body assembly","synonyms":[{"name":"D body assembly","type":"exact"},{"name":"D body formation","type":"exact"},{"name":"nuclear dicing body formation","type":"exact"}],"termid":"GO:1904258"}


id: PBO:0091562
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FolliculiN-interacting Protein","termid":"PBO:0091562"}


id: GO:1903468
data:
  {"annotated_genes":["SJAG_03160","SJAG_03695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114094,119345],"is_not":false,"summary":null,"term":"GO:1903468"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of DNA replication initiation involved in mitotic DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie","GO_REF:0000058","PMID:1234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle DNA replication","termid":"GO:1903465"},{"relation_name":"is_a","term_name":"regulation of mitotic DNA replication initiation","termid":"GO:1903466"},{"relation_name":"positively_regulates","term_name":"mitotic DNA replication initiation","termid":"GO:1902975"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03160":null,"SJAG_03695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006260"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0007049","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of DNA replication initiation","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of DNA replication initiation involved in mitotic DNA replication","type":"narrow"},{"name":"activation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"narrow"},{"name":"positive regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"up-regulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic DNA replication","type":"exact"},{"name":"upregulation of DNA replication initiation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1903468","terms_by_termid":{"GO:1903468":null}}


