# terms

id: PR:O43059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeletal protein syp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.06","synonyms":[{"name":"Spom972h-syp1","type":"exact"}],"termid":"PR:O43059"}


id: PBO:0084228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Htz1p-binding component of the SWR1 complex; exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; may function as a lock that prevents removal of H2AZ from nucleosomes; required for vacuolar protein sorting","termid":"PBO:0084228"}


id: PBO:0075878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3 beta-galactoside alpha-2,3-sialyltransferase 5","termid":"PBO:0075878"}


id: PBO:0057350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 544b","termid":"PBO:0057350"}


id: MONDO:0012457
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hypertrophic pyloric stenosis","termid":"MONDO:0100239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pyloric stenosis, infantile hypertrophic, 2","secondary_identifiers":["UMLS:C1853228","MEDGEN:339934","MESH:C565208","OMIM:610260"],"synonyms":[{"name":"IHPS2","type":"exact"},{"name":"pyloric stenosis, infantile hypertrophic, 2","type":"exact"}],"termid":"MONDO:0012457","xrefs":{"Monarch":{"xref_id":"0012457"}}}


id: PBO:0005102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steroid oxidoreductase superfamily protein (predicted)","termid":"PBO:0005102"}


id: PBO:0044203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin L pseudogene 1","termid":"PBO:0044203"}


id: MONDO:0017949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary cerebral hemorrhage with amyloidosis (HCHWA), Arctic type is a form of HCHWA characterized by an age of onset of 54-61 years and progressive Alzheimer's disease-like dementia, without intracerebral hemorrhages.","definition_xrefs":["Orphanet:324723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, APP-related","termid":"MONDO:0011583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"ABeta amyloidosis, Arctic type","secondary_identifiers":["GARD:17493","ICD10EXP:E85.4+","UMLS:C2751494","ICD10EXP:I68.0*","MEDGEN:414032"],"synonyms":[{"name":"ABetaE22G amyloidosis","type":"exact"},{"name":"HCHWA, Arctic type","type":"exact"},{"name":"cerebral amyloid angiopathy, APP-related, Arctic variant","type":"exact"},{"name":"hereditary cerebral haemorrhage with amyloidosis, Arctic type","type":"exact"},{"name":"hereditary cerebral hemorrhage with amyloidosis, Arctic type","type":"exact"}],"termid":"MONDO:0017949","xrefs":{"Monarch":{"xref_id":"0017949"}}}


id: PBO:0060707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A5 pseudogene 4","termid":"PBO:0060707"}


id: PBO:0057379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548au","termid":"PBO:0057379"}


id: FYECO:0000410
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3,4-dihydrocoumarin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3,4-dihydrocoumarin","synonyms":[{"name":"3,4-dihydrocoumarin added","type":"exact"}],"termid":"FYECO:0000410"}


id: PBO:0061844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OIP5 antisense RNA 1","termid":"PBO:0061844"}


id: PBO:0063996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 30","termid":"PBO:0063996"}


id: GO:0044828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism interferes with, inhibits or disrupts viral genome replication.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of viral process","termid":"GO:0044788"},{"relation_name":"negatively_regulates","term_name":"viral genome replication","termid":"GO:0019079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated suppression of viral genome replication","synonyms":[{"name":"negative regulation by host of viral genome replication","type":"exact"}],"termid":"GO:0044828"}


id: GO:0035908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the ventral aorta over time, from its initial formation to the mature structure. The ventral aorta is a blood vessel in a single-pass circulatory system that carries de-oxygenated blood from the heart to the gills. In a single-pass circulatory system blood passes once through the heart to supply the body once.","definition_xrefs":["UBERON:0003085","GOC:bf","Wikipedia:Aorta","GOC:dgh","ZFA:0000604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aorta development","termid":"GO:0035904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral aorta development","termid":"GO:0035908"}


id: PR:O94687
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tas3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94687"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-induced transcriptional silencing complex protein tas3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.03c","synonyms":[{"name":"RITS protein tas3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-tas3","type":"exact"}],"termid":"PR:O94687"}


id: PBO:0048548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth factor independent 1B transcriptional repressor","termid":"PBO:0048548"}


id: MONDO:0003985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lymphoma that affects the structures of the chest wall. The majority of cases are diffuse large B-cell lymphomas.","definition_xrefs":["NCIT:C6712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"},{"relation_name":"is_a","term_name":"malignant neoplasm of chest wall","termid":"MONDO:0021323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"chest wall lymphoma","secondary_identifiers":["UMLS:C1332933","MEDGEN:232053","DOID:6758"],"synonyms":[{"name":"chest wall cancer","type":"broad"},{"name":"chest wall lymphoma","type":"exact"},{"name":"lymphoma of chest wall","type":"exact"},{"name":"lymphoma of the chest wall","type":"exact"},{"name":"malignant tumour of chest wall","type":"related"},{"name":"primary chest wall lymphoma","type":"exact"}],"termid":"MONDO:0003985","xrefs":{"Monarch":{"xref_id":"0003985"}}}


id: PBO:0061755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acyltransferase like, pseudogene","termid":"PBO:0061755"}


id: MONDO:0013954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency in which the cause of the disease is a mutation in the IL12B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to mycobacterial diseases","termid":"MONDO:0019146"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mendelian susceptibility to mycobacterial diseases due to complete IL12B deficiency","secondary_identifiers":["DOID:0111950","MEDGEN:862385","Orphanet:319558","UMLS:C4013948","OMIM:614890"],"synonyms":[{"name":"IL12B autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency","type":"exact"},{"name":"IL12B deficiency","type":"related"},{"name":"IMD29","type":"related"},{"name":"MSMD due to complete IL12B deficiency","type":"exact"},{"name":"MSMD due to complete interleukin 12B deficiency","type":"exact"},{"name":"Mendelian susceptibility to mycobacterial diseases due to complete interleukin 12B deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a complete deficiency caused by mutation in IL12B","type":"exact"},{"name":"immunodeficiency 29","type":"related"},{"name":"immunodeficiency 29, mycobacteriosis","type":"exact"},{"name":"immunodeficiency type 29","type":"exact"}],"termid":"MONDO:0013954","xrefs":{"Monarch":{"xref_id":"0013954"}}}


id: GO:0050281
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + glyoxylate = 3-hydroxypyruvate + glycine.","definition_xrefs":["EC:2.6.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016769","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"L-serine-glyoxylate transaminase activity","secondary_identifiers":["MetaCyc:SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN","RHEA:19125"],"synonyms":[{"name":"L-serine:glyoxylate aminotransferase activity","type":"related"},{"name":"SGAT activity","type":"related"},{"name":"serine--glyoxylate aminotransferase activity","type":"exact"}],"termid":"GO:0050281"}


id: FYPO:0006702
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of adenine measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular adenine level","synonyms":[{"name":"decreased cellular adenine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular adenine level during vegetative growth","type":"exact"},{"name":"reduced cellular adenine level","type":"exact"}],"termid":"FYPO:0006702"}


id: FYPO:0004162
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0005231"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable when cells the population are subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"loss of viability upon nutrient depletion","termid":"FYPO:0000244"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability upon glucose starvation","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"decreased viability upon glucose starvation","type":"exact"},{"name":"loss of cell population viability upon glucose starvation","type":"exact"},{"name":"loss of viability upon glucose depletion","type":"exact"},{"name":"loss of viability upon glucose deprivation","type":"exact"},{"name":"loss of viability upon glucose limitation","type":"related"},{"name":"reduced viability upon glucose starvation","type":"exact"}],"termid":"FYPO:0004162","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0005231":null}}


id: GO:2000006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric comma-shaped body morphogenesis.","definition_xrefs":["GOC:obol","GOC:yaf","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"metanephric comma-shaped body morphogenesis","termid":"GO:0072278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric comma-shaped body morphogenesis","termid":"GO:2000006"}


id: PBO:0053546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 552","termid":"PBO:0053546"}


id: PBO:0078697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (AAG) 8-1","termid":"PBO:0078697"}


id: PBO:0112489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane protein, palmitoylated, Uvi15","termid":"PBO:0112489"}


id: PBO:0071095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 97","termid":"PBO:0071095"}


id: GO:0004401
data:
  {"annotated_genes":["SJAG_00248"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78556],"is_not":false,"summary":null,"term":"GO:0004401"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-histidinol phosphate + H2O = L-histidinol + phosphate.","definition_xrefs":["EC:3.1.3.15","RHEA:14465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00248":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histidinol-phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R03013","MetaCyc:HISTIDPHOS-RXN"],"synonyms":[{"name":"HPpase activity","type":"related"},{"name":"L-histidinol phosphate phosphatase activity","type":"related"},{"name":"L-histidinol-phosphate phosphohydrolase activity","type":"related"},{"name":"histidinol phosphate phosphatase activity","type":"related"},{"name":"histidinolphosphatase activity","type":"related"},{"name":"histidinolphosphate phosphatase activity","type":"related"}],"termid":"GO:0004401","terms_by_termid":{"GO:0004401":null}}


id: GO:0034346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of type III interferon production. Interferon lambda is the only member of the type III interferon found so far.","definition_xrefs":["ISBN:0126896631","GOC:add","PMID:15546383","PMID:16734557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of type III interferon production","termid":"GO:0034344"},{"relation_name":"positively_regulates","term_name":"type III interferon production","termid":"GO:0034343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of type III interferon production","synonyms":[{"name":"activation of type III interferon production","type":"narrow"},{"name":"positive regulation of type III IFN production","type":"exact"},{"name":"stimulation of type III interferon production","type":"narrow"},{"name":"up regulation of type III interferon production","type":"exact"},{"name":"up-regulation of type III interferon production","type":"exact"},{"name":"upregulation of type III interferon production","type":"exact"}],"termid":"GO:0034346"}


id: MONDO:8000023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, primary immunodeficiency. It is caused by a currently undetermined defect in the Fas-induced apoptosis pathway. No mutations in Fas, FASLG or CASP10 are detectable. Disruption of Fas-induced apoptosis impairs lymphocyte homeostasis and immune tolerance. Characteristic laboratory findings include an increase in circulating, double-negative (CD4-/CD8-) T cells in the setting of immune-mediated anemia, thrombocytopenia and neutropenia. Clinical signs present in childhood include fatigue, pallor, bruising, hepatosplenomegaly and chronic, non-malignant, non-infectious lymphadenopathy. The clinical course is influenced by a strong association with other autoimmune disorders and an increased risk for developing Hodgkin and non-Hodgkin lymphoma.","definition_xrefs":["NCIT:C39577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune lymphoproliferative syndrome","termid":"MONDO:0017979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type 3 autoimmune lymphoproliferative syndrome","secondary_identifiers":["MEDGEN:274327","UMLS:C1519711"],"termid":"MONDO:8000023","xrefs":{"Monarch":{"xref_id":"8000023"}}}


id: GO:1900936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nonadec-1-ene biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of olefin biosynthetic process","termid":"GO:1900912"},{"relation_name":"is_a","term_name":"negative regulation of nonadec-1-ene metabolic process","termid":"GO:1900933"},{"relation_name":"is_a","term_name":"regulation of nonadec-1-ene biosynthetic process","termid":"GO:1900935"},{"relation_name":"negatively_regulates","term_name":"nonadec-1-ene biosynthetic process","termid":"GO:1900877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nonadec-1-ene biosynthetic process","synonyms":[{"name":"down regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down regulation of nonadec-1-ene formation","type":"exact"},{"name":"down regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"down-regulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"down-regulation of nonadec-1-ene formation","type":"exact"},{"name":"down-regulation of nonadec-1-ene synthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene anabolism","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"downregulation of nonadec-1-ene biosynthetic process","type":"exact"},{"name":"downregulation of nonadec-1-ene formation","type":"exact"},{"name":"downregulation of nonadec-1-ene synthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene anabolism","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthesis","type":"exact"},{"name":"inhibition of nonadec-1-ene biosynthetic process","type":"narrow"},{"name":"inhibition of nonadec-1-ene formation","type":"exact"},{"name":"inhibition of nonadec-1-ene synthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene anabolism","type":"exact"},{"name":"negative regulation of nonadec-1-ene biosynthesis","type":"exact"},{"name":"negative regulation of nonadec-1-ene formation","type":"exact"},{"name":"negative regulation of nonadec-1-ene synthesis","type":"exact"}],"termid":"GO:1900936"}


id: PBO:0031791
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle","termid":"PBO:0031791"}


id: GO:0036051
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained at, the trailing edge. The trailing edge is the area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pf","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein localization","termid":"GO:0008104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to trailing edge","synonyms":[{"name":"protein localisation to trailing edge","type":"exact"}],"termid":"GO:0036051"}


id: GO:1901980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of inward rectifier potassium channel activity.","definition_xrefs":["GOC:TermGenie","PMID:23449501"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of inward rectifier potassium channel activity (obsolete GO:1901980)","synonyms":[{"name":"activation of Kir channel activity","type":"exact"},{"name":"activation of inward rectifier potassium channel activity","type":"narrow"},{"name":"positive regulation of Kir channel activity","type":"exact"},{"name":"up regulation of Kir channel activity","type":"exact"},{"name":"up regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"up-regulation of Kir channel activity","type":"exact"},{"name":"up-regulation of inward rectifier potassium channel activity","type":"exact"},{"name":"upregulation of Kir channel activity","type":"exact"},{"name":"upregulation of inward rectifier potassium channel activity","type":"exact"}],"termid":"GO:1901980"}


id: GO:0015642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Acts as to cause lysis of bacterial cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete bacteriolytic toxin activity (obsolete GO:0015642)","synonyms":[{"name":"bacteriolytic toxin activity","type":"exact"}],"termid":"GO:0015642"}


id: PBO:0091292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipase Plb3","termid":"PBO:0091292"}


id: PBO:0087957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane osmosensor for filamentous growth and HOG pathways; involved in activation of the Cdc42p- and MAP kinase-dependent filamentous growth pathway and the high-osmolarity glycerol (HOG) response pathway; phosphorylated by Hog1p; interacts with Pbs2p, Msb2p, Hkr1p, and Ste11p","termid":"PBO:0087957"}


id: MONDO:0003736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An overwhelming, irrational, and persistent fear of being diagnosed with cancer.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nosophobia","termid":"MONDO:0000600"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancerophobia","secondary_identifiers":["UMLS:C0233705","DOID:602","MEDGEN:115929","NCIT:C35492"],"synonyms":[{"name":"Cancerphobia","type":"exact"},{"name":"cancer phobia","type":"exact"},{"name":"fear of getting cancer","type":"exact"},{"name":"fear of getting cancer (finding)","type":"exact"}],"termid":"MONDO:0003736","xrefs":{"Monarch":{"xref_id":"0003736"}}}


id: PBO:0028830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_RNA_localization","termid":"PBO:0028830"}


id: PBO:0000051
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally repressed by Rik1","termid":"PBO:0000051"}


id: GO:0003832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanyl-dopamine + H2O = dopamine + beta-alanine.","definition_xrefs":["RHEA:73467","PMID:16299587"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"beta-alanyl-dopamine hydrolase activity","synonyms":[{"name":"N-beta-alanyl-dopamine hydrolase activity","type":"exact"},{"name":"NBAD hydrolase activity","type":"exact"}],"termid":"GO:0003832"}


id: PBO:0075717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serglycin pseudogene 1","termid":"PBO:0075717"}


id: GO:0052033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent induction by symbiont of host innate immune response (obsolete GO:0052033)","synonyms":[{"name":"MAMP dependent activation of host innate immunity","type":"exact"},{"name":"MAMP dependent induction of host innate immunity","type":"exact"},{"name":"PAMP dependent activation of host innate immunity","type":"exact"},{"name":"PAMP dependent induction of host innate immunity","type":"exact"},{"name":"PTI","type":"related"},{"name":"general elicitor-dependent activation of host innate immunity","type":"exact"},{"name":"general elicitor-dependent induction of host innate immunity","type":"exact"},{"name":"pathogen-associated molecular pattern dependent activation by organism of host innate immunity","type":"exact"},{"name":"pathogen-associated molecular pattern dependent induction by symbiont of host innate immunity","type":"exact"},{"name":"pattern-triggered immunity","type":"related"}],"termid":"GO:0052033"}


id: PBO:0079108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TSC22 domain family member 3","termid":"PBO:0079108"}


id: PBO:0064148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plakophilin 1","termid":"PBO:0064148"}


id: GO:0097228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The segment of the sperm flagellum where the mitochondrial sheath ends, and the outer dense fibers (ODFs) associated with outer axonemal doublets 3 and 8 are replaced by the 2 longitudinal columns of the fibrous sheath (FS) which run the length of the principal piece and are stabilized by circumferential ribs. The principal piece makes up ~2/3 of the length of the sperm flagellum and is defined by the presence of the FS and of only 7 (rather than 9) ODFs which taper and then terminate near the distal end of the principal piece.","definition_xrefs":["MP:0009836","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"sperm flagellum","termid":"GO:0036126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm principal piece","termid":"GO:0097228"}


id: GO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a phytoceramide + H2O = a fatty acid + phytosphingosine.","definition_xrefs":["GOC:pde","PMID:11356846"],"gene_count":0,"genotype_count":0,"name":"obsolete phytoceramidase activity (obsolete GO:0070774)","secondary_identifiers":["Reactome:R-HSA-428262"],"termid":"GO:0070774"}


id: PBO:0016562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein Nap2","termid":"PBO:0016562"}


id: GO:0015068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arginine + glycine = L-ornithine + guanidinoacetate.","definition_xrefs":["RHEA:13201"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amidinotransferase activity","termid":"GO:0015067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"glycine amidinotransferase activity","secondary_identifiers":["MetaCyc:GLYCINE-AMIDINOTRANSFERASE-RXN","EC:2.1.4.1","Reactome:R-HSA-71275"],"synonyms":[{"name":"L-arginine:glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine amidinotransferase activity","type":"related"},{"name":"arginine-glycine transamidinase activity","type":"related"},{"name":"glycine transamidinase activity","type":"related"}],"termid":"GO:0015068"}


id: PBO:0045016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent protein kinase domain 1A","termid":"PBO:0045016"}


id: GO:0044194
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory lysosome that is present in cells with cytolytic capability such as cytotoxic T lymphocytes and natural killer cells. Cytolytic granules mediate the storage and regulated excretion of lytic molecules for killing of target cells.","definition_xrefs":["PMID:11052265","GOC:jl","PMID:12766758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome","termid":"GO:0005764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"cytolytic granule","termid":"GO:0044194"}


id: PBO:0063235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin alpha cluster, complex locus","termid":"PBO:0063235"}


id: MONDO:0012333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the COL11A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 53","secondary_identifiers":["UMLS:C1864746","GARD:22616","DOID:0110509","OMIM:609706","MEDGEN:400602","MESH:C566453"],"synonyms":[{"name":"COL11A2 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB53","type":"narrow"},{"name":"autosomal recessive deafness 53","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 53","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in COL11A2","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 53","type":"narrow"},{"name":"deafness, autosomal recessive 53","type":"narrow"},{"name":"deafness, autosomal recessive type 53","type":"narrow"}],"termid":"MONDO:0012333","xrefs":{"Monarch":{"xref_id":"0012333"}}}


id: SO:0001432
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001432 sequence_variant_affecting_polyadenylation (obsolete SO:0001432)","synonyms":[{"name":"mutation affecting polyadenylation","type":"related"},{"name":"sequence variant affecting polyadenylation","type":"exact"}],"termid":"SO:0001432"}


id: PBO:0073042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scleraxis bHLH transcription factor","termid":"PBO:0073042"}


id: PR:000050494
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe) that has been phosphorylated at either position 2, 5, or 7 of one or more C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:28367989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe)","termid":"PR:000044736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S2,S5,S7)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:CTD","type":"exact"},{"name":"rpb1/Phos(CTD-S2,S5,S7)","type":"exact"}],"termid":"PR:000050494"}


id: GO:0070155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling methionine to methionyl-tRNA in a mitochondrion, catalyzed by methionyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methionyl-tRNA aminoacylation","termid":"GO:0006431"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399","GO:0006520","GO:0140053"],"is_obsolete":false,"name":"mitochondrial methionyl-tRNA aminoacylation","termid":"GO:0070155"}


id: PBO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxymuconolactone decarboxylase-like protein, Pxp2","termid":"PBO:0089719"}


id: MONDO:0030512
data:
  {"annotated_genes":["SJAG_01854"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88067],"is_not":false,"summary":null,"term":"MONDO:0030512"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01854":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 85, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:631082","UMLS:C5562053","MEDGEN:1794263","OMIM:619686","DOID:0112345"],"synonyms":[{"name":"SPG85","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 85","type":"exact"}],"termid":"MONDO:0030512","terms_by_termid":{"MONDO:0030512":null},"xrefs":{"Monarch":{"xref_id":"0030512"}}}


id: GO:0098858
data:
  {"annotated_genes":["SJAG_04001"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005902"}]},"cv_name":"cellular_component","definition":"A cell projection supported by an assembly of actin filaments, and which lacks microtubules.","definition_xrefs":["PMID:15661519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"actin-based cell projection","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0098858","terms_by_termid":{"GO:0005902":null}}


id: PBO:0089600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDP dissociation inhibitor Gdi1","termid":"PBO:0089600"}


id: GO:1901336
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lactone anabolism","type":"exact"},{"name":"lactone biosynthesis","type":"exact"},{"name":"lactone formation","type":"exact"},{"name":"lactone synthesis","type":"exact"}],"termid":"GO:1901336","terms_by_termid":{"GO:0070485":null}}


id: GO:0097289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving alpha-ribazole, the benzimidazole nucleoside in adenosyl cobalamin (vitamin B12).","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosyl compound metabolic process","termid":"GO:1901657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-ribazole metabolic process","synonyms":[{"name":"alpha-ribazole metabolism","type":"exact"}],"termid":"GO:0097289"}


id: PBO:0044040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 4 pseudogene 12","termid":"PBO:0044040"}


id: FYPO:0004800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which premeiotic DNA replication does not occur during a cycle of azygotic meiosis and sporulation. Azygotic meiosis and sporulation occur when meiosis takes place within a diploid cell rather than in a zygote produced by sporulation. Zygotes can resume vegetative growth and form colonies of diploid cells if returned to rich media before commitment to meiosis; under nitrogen starvation, diploid cells heterozygous for mating type will undergo azygotic meiosis. Azygotic asci have a characteristic linear morphology resembling that of a single vegetatively growing cell.","definition_xrefs":["PMID:22558440","PMID:25891897","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished premeiotic DNA replication","termid":"FYPO:0002044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abolished premeiotic DNA replication during azygotic meiotic cell cycle","synonyms":[{"name":"abolished DNA replication before azygotic meiotic cell cycle","type":"exact"},{"name":"abolished premeiotic DNA replication during azygotic meiosis","type":"related"},{"name":"abolished premeiotic DNA replication during azygotic meiosis and sporulation","type":"exact"},{"name":"absent premeiotic DNA replication during azygotic meiotic cell cycle","type":"exact"},{"name":"premeiotic DNA replication abolished during azygotic meiotic cell cycle","type":"exact"}],"termid":"FYPO:0004800"}


id: PBO:0013815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog Lvs1 (predicted)","termid":"PBO:0013815"}


id: FYPO:0008199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 at the centromere outer repeat is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 trimethylation at centromere outer repeat during vegetative growth","termid":"FYPO:0008199"}


id: PBO:0003146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein (predicted)","termid":"PBO:0003146"}


id: MONDO:0009129
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dwarfism, proportionate, with hip dislocation","secondary_identifiers":["OMIM:223550","UMLS:C1857196","MEDGEN:347392","MESH:C565614"],"synonyms":[{"name":"dwarfism, proportionate with hip dislocation","type":"related"},{"name":"dwarfism, proportionate, with hip dislocation","type":"exact"}],"termid":"MONDO:0009129","xrefs":{"Monarch":{"xref_id":"0009129"}}}


id: GO:1904384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium phosphate stimulus.","definition_xrefs":["PMID:24625659","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to salt","termid":"GO:1902075"},{"relation_name":"is_a","term_name":"response to sodium phosphate","termid":"GO:1904383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to sodium phosphate","termid":"GO:1904384"}


id: MONDO:0018580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete PURA-related severe neonatal hypotonia-seizures-encephalopathy syndrome (obsolete MONDO:0018580)","termid":"MONDO:0018580","xrefs":{"Monarch":{"xref_id":"0018580"}}}


id: PBO:0040751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxybutyrate dehydrogenase 2, pseudogene 1","termid":"PBO:0040751"}


id: GO:0018614
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ethylbenzene + O2 + NADH + H+ = NAD+ + cis-2,3-dihydroxy-2,3-dihydroethylbenzene.","definition_xrefs":["UM-BBD_reactionID:r0247"],"gene_count":0,"genotype_count":0,"name":"obsolete ethylbenzene dioxygenase activity (obsolete GO:0018614)","termid":"GO:0018614"}


id: GO:0043507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of JUN kinase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of MAP kinase activity","termid":"GO:0043406"},{"relation_name":"is_a","term_name":"regulation of JUN kinase activity","termid":"GO:0043506"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of JUN kinase activity","synonyms":[{"name":"positive regulation of JUNK activity","type":"exact"},{"name":"stimulation of JNK activity","type":"narrow"},{"name":"up regulation of JNK activity","type":"exact"},{"name":"up-regulation of JNK activity","type":"exact"},{"name":"upregulation of JNK activity","type":"exact"}],"termid":"GO:0043507"}


id: GO:0018286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 3Fe-3S iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide. The three-iron three-sulfur cluster probably does not exist except as an intermediate form.","definition_xrefs":["RESID:AA0138"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide (obsolete GO:0018286)","synonyms":[{"name":"iron incorporation into iron-sulfur cluster via hexakis-L-cysteinyl triiron trisulfide","type":"exact"},{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl triiron trisulphide","type":"exact"}],"termid":"GO:0018286"}


id: MONDO:0002968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cystic lesion containing lymph. It usually results from injury, gynecologic surgery, or urologic surgery.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic system disorder","termid":"MONDO:0005833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lymphocele","secondary_identifiers":["MESH:D008210","DOID:4347","icd11.foundation:1806199285","UMLS:C0024248","ICD9:457.8","SCTID:234110002","MEDGEN:7414"],"synonyms":[{"name":"lymph cyst","type":"exact"}],"termid":"MONDO:0002968","xrefs":{"Monarch":{"xref_id":"0002968"}}}


id: GO:1905958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to alcohol.","definition_xrefs":["GOC:TermGenie","PMID:26434723","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to alcohol","termid":"GO:1901420"},{"relation_name":"is_a","term_name":"regulation of cellular response to alcohol","termid":"GO:1905957"},{"relation_name":"negatively_regulates","term_name":"cellular response to alcohol","termid":"GO:0097306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to alcohol","synonyms":[{"name":"down regulation of cellular response to alcohol","type":"exact"},{"name":"down-regulation of cellular response to alcohol","type":"exact"},{"name":"downregulation of cellular response to alcohol","type":"exact"},{"name":"inhibition of cellular response to alcohol","type":"narrow"}],"termid":"GO:1905958"}


id: GO:0050318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: digallate + H2O = 2 gallate + H+.","definition_xrefs":["EC:3.1.1.20","RHEA:16365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"tannase activity","secondary_identifiers":["MetaCyc:TANNASE-RXN","KEGG_REACTION:R00053"],"synonyms":[{"name":"tannase S","type":"related"},{"name":"tannin acetylhydrolase activity","type":"related"},{"name":"tannin acylhydrolase activity","type":"related"}],"termid":"GO:0050318"}


id: SO:0001071
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Arrangement of the polypeptide with respect to the lipid bilayer.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_structural_region","termid":"SO:0001070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"membrane_structure","secondary_identifiers":["BS:00128"],"synonyms":[{"name":"membrane structure","type":"exact"}],"termid":"SO:0001071"}


id: PBO:0044381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily D member 1, pseudogene","termid":"PBO:0044381"}


id: PBO:0060777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8 pseudogene 3","termid":"PBO:0060777"}


id: FYPO:0001434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of N,N'-(p-xylylidene)bis-aminoguanidine 2HCl than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl","synonyms":[{"name":"resistance to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl during mitotic cell cycle","type":"related"},{"name":"resistance to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl during vegetative growth","type":"exact"},{"name":"resistant to N,N'-(p-xylylidene)bis-aminoguanidine 2HCl","type":"exact"}],"termid":"FYPO:0001434"}


id: PBO:0113502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA 2'-phosphotransferase; catalyzes the final step in tRNA splicing, transferring the 2'-PO(4) from the splice junction to NAD(+), forming ADP-ribose 1''-2''cyclic phosphate and nicotinamide; ADP-ribosyltransferase that ADP-ribosylates 5'-phosphorylated ssDNA and ssRNAs; human and mouse orthologs complement the inviability of the yeast null mutant","termid":"PBO:0113502"}


id: PR:000027595
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3 that is a translation product of the Schizosaccharomyces pombe 972h- hht3 gene or a 1:1 ortholog thereof in fungi.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.3","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"hht3","type":"exact"}],"termid":"PR:000027595"}


id: SO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The possible discontinous stretch of DNA that encompass all the TFRSs that regulate a promoter.","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"has_part","term_name":"transcription_factor_regulatory_site","termid":"SO:0002295"},{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFRS_collection","synonyms":[{"name":"TFRS collection","type":"exact"},{"name":"transcription factor regulatory site collection","type":"exact"}],"termid":"SO:0002297"}


id: PBO:0065546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 synthase","termid":"PBO:0065546"}


id: PBO:0064473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 4, accessory subunit","termid":"PBO:0064473"}


id: GO:0061133
data:
  {"annotated_genes":["SJAG_04484","SJAG_04211"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76202,80099],"is_not":false,"summary":null,"term":"GO:0061133"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of an endopeptidase.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase activator activity","termid":"GO:0016504"},{"relation_name":"is_a","term_name":"endopeptidase regulator activity","termid":"GO:0061135"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04211":null,"SJAG_04484":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"endopeptidase activator activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0061133","terms_by_termid":{"GO:0061133":null}}


id: MONDO:0021048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized mast cell neoplasm without metastatic potential.","definition_xrefs":["NCIT:C3217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mastocytoma","termid":"MONDO:0003079"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"benign mastocytoma","secondary_identifiers":["UMLS:C2242987","MEDGEN:384518","DOID:4658"],"synonyms":[{"name":"MAST cell tumor, benign","type":"exact"},{"name":"benign mastocytoma","type":"exact"},{"name":"mastocytoma, benign","type":"exact"}],"termid":"MONDO:0021048","xrefs":{"Monarch":{"xref_id":"0021048"}}}


id: PBO:0027319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_electron_transport,_succinate_to_ubiquinone","termid":"PBO:0027319"}


id: GO:1904143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of carotenoid biosynthetic process.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25675505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of isoprenoid metabolic process","termid":"GO:0045828"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"positively_regulates","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of carotenoid biosynthetic process","synonyms":[{"name":"activation of carotenoid anabolism","type":"narrow"},{"name":"activation of carotenoid biosynthesis","type":"narrow"},{"name":"activation of carotenoid biosynthetic process","type":"narrow"},{"name":"activation of carotenoid formation","type":"narrow"},{"name":"activation of carotenoid synthesis","type":"narrow"},{"name":"positive regulation of carotenoid anabolism","type":"exact"},{"name":"positive regulation of carotenoid biosynthesis","type":"exact"},{"name":"positive regulation of carotenoid formation","type":"exact"},{"name":"positive regulation of carotenoid synthesis","type":"exact"},{"name":"up regulation of carotenoid anabolism","type":"exact"},{"name":"up regulation of carotenoid biosynthesis","type":"exact"},{"name":"up regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up regulation of carotenoid formation","type":"exact"},{"name":"up regulation of carotenoid synthesis","type":"exact"},{"name":"up-regulation of carotenoid anabolism","type":"exact"},{"name":"up-regulation of carotenoid biosynthesis","type":"exact"},{"name":"up-regulation of carotenoid biosynthetic process","type":"exact"},{"name":"up-regulation of carotenoid formation","type":"exact"},{"name":"up-regulation of carotenoid synthesis","type":"exact"},{"name":"upregulation of carotenoid anabolism","type":"exact"},{"name":"upregulation of carotenoid biosynthesis","type":"exact"},{"name":"upregulation of carotenoid biosynthetic process","type":"exact"},{"name":"upregulation of carotenoid formation","type":"exact"},{"name":"upregulation of carotenoid synthesis","type":"exact"}],"termid":"GO:1904143"}


id: MONDO:0011659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 3, autosomal","secondary_identifiers":["UMLS:C1853444","DOID:0051018","MEDGEN:339983","MESH:C565237","OMIM:606325"],"synonyms":[{"name":"HTX3","type":"exact"},{"name":"heterotaxy, visceral, 3, autosomal","type":"exact"}],"termid":"MONDO:0011659","xrefs":{"Monarch":{"xref_id":"0011659"}}}


id: PR:Q9UU96
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- grc3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polynucleotide 5'-hydroxyl-kinase grc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC830.03","synonyms":[{"name":"Spom972h-grc3","type":"exact"}],"termid":"PR:Q9UU96"}


id: MONDO:1010978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Huntington disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Huntington disease, non-human animal","termid":"MONDO:1010231"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Huntington disease, sheep","secondary_identifiers":["OMIA:000485-9940"],"termid":"MONDO:1010978","xrefs":{"Monarch":{"xref_id":"1010978"}}}


id: PBO:0018290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THO complex subunit Tho1 (predicted)","termid":"PBO:0018290"}


id: PBO:0031817
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_autophagy","termid":"PBO:0031817"}


id: PBO:0109224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex component 5","termid":"PBO:0109224"}


id: PBO:0059747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 21","termid":"PBO:0059747"}


id: PBO:0086046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function involved in RNA metabolism; has structural similarity to SBDS, the human protein mutated in Shwachman-Diamond Syndrome (the yeast SBDS ortholog is SDO1); null mutation suppresses cdc13-1 temperature sensitivity; protein abundance increases in response to DNA replication stress","termid":"PBO:0086046"}


id: MONDO:0004414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of endometrial abnormalities that occur in women who use tamoxifen to treat or prevent the development of breast cancer. These abnormalities include endometrial polyps, endometrial hyperplasia, and endometrial carcinoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometrial disorder","termid":"MONDO:0000931"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tamoxifen-related endometrial lesion","secondary_identifiers":["NCIT:C40159","DOID:7962","MEDGEN:271571","UMLS:C1515212"],"synonyms":[{"name":"tamoxifen-related endometrial disorder","type":"exact"}],"termid":"MONDO:0004414","xrefs":{"Monarch":{"xref_id":"0004414"}}}


id: GO:0009485
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: 4 ferrocytochrome c + O2 = 4 ferricytochrome c + 2 H2O.","definition_xrefs":["EC:1.9.3.1"],"gene_count":0,"genotype_count":0,"name":"obsolete cbb3-type cytochrome c oxidase (obsolete GO:0009485)","synonyms":[{"name":"cbb3-type cytochrome c oxidase","type":"exact"}],"termid":"GO:0009485"}


id: PBO:0069955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1248, pseudogene","termid":"PBO:0069955"}


id: MONDO:0006921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the order actinomycetales.","definition_xrefs":["MESH:D000193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gram-positive bacterial infections","termid":"MONDO:0021679"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Actinomycetales infectious disease","secondary_identifiers":["MEDGEN:1732","ICD9:039.8","SCTID:721751007","SCTID:11817007","EFO:1001122","NCIT:C84534","UMLS:C0001255","ICD9:039.9"],"synonyms":[{"name":"actinomycetales caused disease or disorder","type":"exact"},{"name":"actinomycetales disease or disorder","type":"exact"},{"name":"actinomycetales infection","type":"exact"},{"name":"actinomycetales infections","type":"exact"},{"name":"actinomycete infection","type":"exact"},{"name":"actinomycete infections","type":"exact"},{"name":"actinomycosis","type":"related"},{"name":"actinomycotic infection","type":"exact"},{"name":"actinomycotic infectious disease","type":"exact"},{"name":"infection caused by actinomycetales","type":"related"},{"name":"infection, actinomycetales","type":"exact"},{"name":"infection, actinomycete","type":"exact"},{"name":"infections, actinomycetales","type":"exact"},{"name":"infections, actinomycete","type":"exact"}],"termid":"MONDO:0006921","xrefs":{"Monarch":{"xref_id":"0006921"}}}


id: PBO:0070069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 26, pseudogene","termid":"PBO:0070069"}


id: GO:0047019
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93832],"is_not":false,"summary":null,"term":"GO:0047019"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-ethanol + NADP+ = (indol-3-yl)acetaldehyde + H+ + NADPH.","definition_xrefs":["RHEA:17037","EC:1.1.1.191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"indole-3-acetaldehyde reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:1.1.1.191-RXN","KEGG_REACTION:R02680"],"synonyms":[{"name":"(indol-3-yl)ethanol:NADP+ oxidoreductase activity","type":"related"},{"name":"indole-3-ethanol:NADP+ oxidoreductase activity","type":"related"},{"name":"indoleacetaldehyde (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"}],"termid":"GO:0047019","terms_by_termid":{"GO:0047019":null}}


id: GO:0050964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events that contribute to electroception in which an electrical stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of electrical stimulus involved in sensory perception","termid":"GO:0050963"},{"relation_name":"part_of","term_name":"electroception","termid":"GO:0050956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of electrical stimulus involved in electroception","synonyms":[{"name":"detection of electrical stimulus during electroreception","type":"related"},{"name":"electroception, detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory detection of electrical stimulus","type":"exact"},{"name":"electroception, sensory transduction","type":"exact"},{"name":"electroception, sensory transduction of electrical stimulus","type":"exact"},{"name":"sensory detection of electrical stimulus during electroception","type":"related"},{"name":"sensory transduction of electrical stimulus during electroception","type":"related"}],"termid":"GO:0050964"}


id: PBO:0056496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 3 like 1","termid":"PBO:0056496"}


id: PBO:0055137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2556","termid":"PBO:0055137"}


id: PBO:0053162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low density lipoprotein receptor class A domain containing 4","termid":"PBO:0053162"}


id: PBO:0053387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 314","termid":"PBO:0053387"}


id: MONDO:0013117
data:
  {"annotated_genes":["SJAG_00885"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87511],"is_not":false,"summary":null,"term":"MONDO:0013117"}]},"cv_name":"mondo","definition":"Any progressive external ophthalmoplegia with mitochondrial DNA deletions in which the cause of the disease is a mutation in the RRM2B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant progressive external ophthalmoplegia","termid":"MONDO:0008003"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0000426","MONDO:0002320","MONDO:0005066","MONDO:0005336"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:413981","GARD:16501","DOID:0111518","OMIM:613077","UMLS:C2751319","MESH:C567768"],"synonyms":[{"name":"PEOA5","type":"related"},{"name":"RRM2B progressive external ophthalmoplegia with mitochondrial DNA deletions","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions caused by mutation in RRM2B","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant 5","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal dominant type 5","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal dominant 5","type":"related"}],"termid":"MONDO:0013117","terms_by_termid":{"MONDO:0013117":null},"xrefs":{"Monarch":{"xref_id":"0013117"}}}


id: PBO:0058561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6503","termid":"PBO:0058561"}


id: MONDO:0006757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Impairment of the bile flow caused by an obstruction in the portion of the bile duct system located outside of the liver.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholestasis","termid":"MONDO:0001751"},{"relation_name":"is_a","term_name":"non-neoplastic bile duct disorder","termid":"MONDO:0006322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic cholestasis","secondary_identifiers":["MESH:D001651","SCTID:8262006","UMLS:C0005398","MEDGEN:2241","MedDRA:10008637","EFO:1000933","DOID:13619"],"synonyms":[{"name":"cholestasis of extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct cholestasis","type":"exact"},{"name":"extrahepatic biliary stasis","type":"exact"},{"name":"extrahepatic cholestasis (finding)","type":"exact"},{"name":"extrahepatic obstructive biliary disease","type":"exact"}],"termid":"MONDO:0006757","xrefs":{"Monarch":{"xref_id":"0006757"}}}


id: PBO:0117057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK2 antisense RNA 1","termid":"PBO:0117057"}


id: GO:1904495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of substance P secretion, neurotransmission.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:15292051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of substance P secretion","termid":"GO:1904459"},{"relation_name":"is_a","term_name":"regulation of substance P secretion, neurotransmission","termid":"GO:1904494"},{"relation_name":"negatively_regulates","term_name":"substance P secretion, neurotransmission","termid":"GO:1990793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of substance P secretion, neurotransmission","synonyms":[{"name":"down regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"down-regulation of substance P secretion, neurotransmission","type":"exact"},{"name":"downregulation of substance P secretion, neurotransmission","type":"exact"},{"name":"inhibition of substance P secretion, neurotransmission","type":"narrow"}],"termid":"GO:1904495"}


id: PBO:0081642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 568","termid":"PBO:0081642"}


id: MONDO:0032906
data:
  {"annotated_genes":["SJAG_04628"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88685],"is_not":false,"summary":null,"term":"MONDO:0032906"}]},"cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is an autosomal recessive mutation in the PCYT2 gene.","definition_xrefs":["MONDO:patterns/hereditary","PMID:31637422"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04628":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 82, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112343","Orphanet:631073","MEDGEN:1710411","OMIM:618770","UMLS:C5394037"],"synonyms":[{"name":"SPG82","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 82","type":"exact"},{"name":"spastic paraplegia 82, autosomal recessive","type":"exact"}],"termid":"MONDO:0032906","terms_by_termid":{"MONDO:0032906":null},"xrefs":{"Monarch":{"xref_id":"0032906"}}}


id: PBO:0073726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 7","termid":"PBO:0073726"}


id: GO:0030906
data:
  {"annotated_genes":["SJAG_01039"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71161],"is_not":false,"summary":null,"term":"GO:0030906"}]},"cv_name":"cellular_component","definition":"The trimeric subcomplex of the retromer, believed to be closely associated with the membrane. This trimeric complex is responsible for recognizing and binding to cargo molecules. The complex comprises three Vps proteins in both yeast and mammalian cells: Vps35p, Vps29p, and Vps26p in yeast, and VPS35, VPS29 and VPS26A or VPS26B in mammals.","definition_xrefs":["PMID:11102511","PMID:26220253","GOC:bf","PMID:9700157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"retromer complex","termid":"GO:0030904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"retromer, cargo-selective complex","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"cargo-selective retromer subcomplex","type":"exact"},{"name":"retromer CSC","type":"exact"},{"name":"retromer complex, inner shell","type":"exact"},{"name":"retromer, CRC","type":"exact"},{"name":"retromer, cargo recognition complex","type":"exact"}],"termid":"GO:0030906","terms_by_termid":{"GO:0030906":null}}


id: MONDO:0011281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital myasthenic syndrome caused by mutation(s) in the COLQ gene, encoding acetylcholinesterase collagenic tail peptide. It is inherited in an autosomal recessive manner.","definition_xrefs":["NCIT:C129304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myasthenic syndrome 5","secondary_identifiers":["GARD:18210","UMLS:C1864233","DOID:0110667","MEDGEN:400481","MESH:C566415","NANDO:1201056","OMIM:603034"],"synonyms":[{"name":"CMS Ic","type":"exact"},{"name":"CMS5","type":"exact"},{"name":"COLQ congenital myasthenic syndrome","type":"exact"},{"name":"Cms Ic","type":"related"},{"name":"Cms Ic, formerly","type":"related"},{"name":"EAD","type":"exact"},{"name":"Engel congenital myasthenic syndrome","type":"exact"},{"name":"congenital myasthenic syndrome 5","type":"exact"},{"name":"congenital myasthenic syndrome Engel type","type":"exact"},{"name":"congenital myasthenic syndrome caused by mutation in COLQ","type":"exact"},{"name":"congenital myasthenic syndrome type 5","type":"exact"},{"name":"congenital myasthenic syndrome type Ic","type":"exact"},{"name":"congenital myasthenic syndrome type Ic, formerly","type":"related"},{"name":"end plate acetylcholinesterase deficiency","type":"exact"},{"name":"endplate acetylcholinesterase deficiency","type":"related"},{"name":"myasthenic syndrome, congenital, 5","type":"related"},{"name":"myasthenic syndrome, congenital, Engel type","type":"related"},{"name":"myasthenic syndrome, congenital, type 5","type":"exact"}],"termid":"MONDO:0011281","xrefs":{"Monarch":{"xref_id":"0011281"}}}


id: GO:0036512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of the second alpha-1,2-linked mannose from the A-chain of a glycoprotein oligosaccharide in the endoplasmic reticulum.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:12829701"],"gene_count":0,"genotype_count":0,"name":"obsolete trimming of second mannose on A branch (obsolete GO:0036512)","synonyms":[{"name":"conversion of (Man)8A(GlcNAc)2 to (Man)7AA(GlcNAc)2","type":"related"},{"name":"conversion of M8A to M7AA","type":"related"},{"name":"glycoprotein mannose trimming on A branch","type":"broad"}],"termid":"GO:0036512"}


id: MONDO:8000031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete subtype of a disorder (obsolete MONDO:8000031)","secondary_identifiers":["Orphanet:557494"],"termid":"MONDO:8000031","xrefs":{"Monarch":{"xref_id":"8000031"}}}


id: PBO:0073134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 6","termid":"PBO:0073134"}


id: GO:0015160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of beta-glucans from one side of a membrane to the other. Beta-glucans are compounds composed of glucose residues linked by beta-glucosidic bonds.","definition_xrefs":["GOC:ai","ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"beta-glucan transmembrane transporter activity","termid":"GO:0015160"}


id: PBO:0076024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 19B (pseudogene)","termid":"PBO:0076024"}


id: PBO:0077144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidine kinase 1","termid":"PBO:0077144"}


id: PBO:0016109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 reductase Cbr1 (predicted)","termid":"PBO:0016109"}


id: MONDO:0005706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infection caused by Coccidioides immitis. Affected individuals usually have mild flu-like symptoms. However, pneumonia and systemic involvement with the formation of abscesses may develop as complications of the disease.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"},{"relation_name":"is_a","term_name":"parasitic infectious disease","termid":"MONDO:0005135"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coccidioidomycosis","secondary_identifiers":["MESH:D003047","DOID:13450","ICD9:114.9","ICD9:114","UMLS:C0009186","ICD9:114.1","MEDGEN:3137","SCTID:23247008","EFO:0007211","GARD:9525","ICD10CM:B38","ICD10WHO:B38","icd11.foundation:132287989","MedDRA:10009825","Orphanet:228123","NCIT:C84642"],"synonyms":[{"name":"California disease","type":"exact"},{"name":"Coccidioides immitis caused disease or disorder","type":"exact"},{"name":"Coccidioides immitis disease or disorder","type":"exact"},{"name":"Coccidioides immitis infectious disease","type":"exact"},{"name":"Coccidioides infection","type":"exact"},{"name":"San Joaquin valley fever","type":"exact"},{"name":"Valley fever","type":"exact"},{"name":"desert fever","type":"exact"},{"name":"desert rheumatism","type":"exact"},{"name":"primary extrapulmonary coccidioidomycosis","type":"exact"}],"termid":"MONDO:0005706","xrefs":{"Monarch":{"xref_id":"0005706"}}}


id: MONDO:0017285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Penoscrotal transposition (PST) is a rare congenital genital anomaly in which the scrotum is positioned superior and anterior to the penis. PST may present with a broad spectrum of anomalies ranging from simple shawl scrotum (doughnut scrotum) to very complex extreme transposition with craniofacial, central nervous system, cardiac, gastrointestinal, urological, and other genital (undescended testicles, hypospadias, chordee) malformations. Growth deficiency and intellectual disability may also be noticed (60% of cases).","definition_xrefs":["Orphanet:2842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive system disorder","termid":"MONDO:0003150"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"penoscrotal transposition","secondary_identifiers":["MEDGEN:357036","MedDRA:10067287","SCTID:312005008","UMLS:C1868854","HP:0100600","icd11.foundation:1417779551","MESH:C536650","GARD:4273","NCIT:C99010"],"synonyms":[{"name":"Prepenile scrotum","type":"related"},{"name":"congenital penoscrotal transposition","type":"exact"},{"name":"congenital transposition of the penis","type":"related"},{"name":"penoscrotal transposition","type":"exact"},{"name":"penoscrotal transposition (disease)","type":"exact"}],"termid":"MONDO:0017285","xrefs":{"Monarch":{"xref_id":"0017285"}}}


id: GO:0006857
data:
  {"annotated_genes":["SJAG_03497","SJAG_01660","SJAG_01344","SJAG_02139","SJAG_03577","SJAG_05213","SJAG_05182","SJAG_02602","SJAG_01983","SJAG_00922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140206"},{"annotations":[120427,120428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035442"},{"annotations":[97537],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098709"},{"annotations":[115189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160007"},{"annotations":[120276,98085,99061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071996"},{"annotations":[77574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090374"},{"annotations":[99062,98086,120277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036246"},{"annotations":[110025],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901583"},{"annotations":[105030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140207"}]},"cv_name":"biological_process","definition":"The directed movement of oligopeptides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide transport","termid":"GO:0015833"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00922":null,"SJAG_01344":null,"SJAG_01660":null,"SJAG_01983":null,"SJAG_02139":null,"SJAG_02602":null,"SJAG_03497":null,"SJAG_03577":null,"SJAG_05182":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"oligopeptide transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0006857","terms_by_termid":{"GO:0035442":null,"GO:0036246":null,"GO:0071996":null,"GO:0090374":null,"GO:0098709":null,"GO:0140206":null,"GO:0140207":null,"GO:0160007":null,"GO:1901583":null}}


id: PATO:0000983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A permeability quality inhering in a bearer by virtue of the bearer's being incapable of being permeated or pervaded by a liquid (as by osmosis or diffusion).","definition_xrefs":["Biology-online:Biology-online"],"direct_ancestors":[{"relation_name":"is_a","term_name":"permeability","termid":"PATO:0000970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"impermeable","termid":"PATO:0000983"}


id: PBO:0049924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocyte growth factor","termid":"PBO:0049924"}


id: GO:0140511
data:
  {"annotated_genes":["SJAG_00680"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95846],"is_not":false,"summary":null,"term":"GO:0140511"}]},"cv_name":"cellular_component","definition":"Either of the regions of a mitotic nuclear bridge proximal to the main portion of each daughter nucleus. The nuclear envelope in the stalk regions is depleted of nuclear pore complexes.","definition_xrefs":["PMID:32848252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitotic nuclear bridge","termid":"GO:0140510"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic nuclear bridge stalk","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140511","terms_by_termid":{"GO:0140511":null}}


id: PBO:0052069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine acetyltransferase 8","termid":"PBO:0052069"}


id: PATO:0000868
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000868 vibrissae reflex value (obsolete PATO:0000868)","termid":"PATO:0000868"}


id: PBO:0077801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"torsin family 4 member A","termid":"PBO:0077801"}


id: PBO:0051161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-42 (pseudogene)","termid":"PBO:0051161"}


id: PBO:0050153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 9","termid":"PBO:0050153"}


id: GO:0035066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the addition of an acetyl group to a histone protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone acetylation (obsolete GO:0035066)","synonyms":[{"name":"activation of histone acetylation","type":"narrow"},{"name":"stimulation of histone acetylation","type":"narrow"},{"name":"up regulation of histone acetylation","type":"exact"},{"name":"up-regulation of histone acetylation","type":"exact"},{"name":"upregulation of histone acetylation","type":"exact"}],"termid":"GO:0035066"}


id: PBO:0083338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the uncharacterized ORFs YLR462W and YLR464W","termid":"PBO:0083338"}


id: GO:0061201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of the clathrin-sculpted gamma-aminobutyric acid transport vesicle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"clathrin-sculpted gamma-aminobutyric acid transport vesicle","termid":"GO:0061200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"clathrin-sculpted gamma-aminobutyric acid transport vesicle lumen","synonyms":[{"name":"clathrin sculpted GABA transport vesicle lumen","type":"exact"},{"name":"clathrin sculpted gamma-aminobutyric acid transport vesicle lumen","type":"exact"}],"termid":"GO:0061201"}


id: PBO:0087354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor and component of snRNP U5; factor involved in the positioning of the 3' splice site during the second catalytic step of splicing; interacts with Slu7p","termid":"PBO:0087354"}


id: GO:0006836
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a neurotransmitter into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Neurotransmitters are any chemical substance that is capable of transmitting (or inhibiting the transmission of) a nerve impulse from a neuron to another cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter transport","secondary_identifiers":["Reactome:R-HSA-181430","Reactome:R-HSA-181429","Reactome:R-HSA-210500","Reactome:R-HSA-212676","Reactome:R-HSA-264642"],"synonyms":[{"name":"sodium:neurotransmitter transport","type":"narrow"}],"termid":"GO:0006836"}


id: PBO:0068874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 114, pseudogene","termid":"PBO:0068874"}


id: GO:0005587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type IV alpha chains; [alpha1(IV)]2alpha2(IV) trimers are commonly observed, although more type IV alpha chains exist and may be present in type IV trimers; type IV collagen triple helices associate to form 3 dimensional nets within basement membranes.","definition_xrefs":["PMID:19693541","PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"network-forming collagen trimer","termid":"GO:0098642"},{"relation_name":"part_of","term_name":"basement membrane","termid":"GO:0005604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"collagen type IV trimer","secondary_identifiers":["Wikipedia:Collagen_type_IV"],"termid":"GO:0005587"}


id: PR:Q09783
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tim8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G6.04","synonyms":[{"name":"Spom972h-tim8","type":"exact"}],"termid":"PR:Q09783"}


id: FYPO:0001111
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione disulfide (GSSG) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutathione disulfide level","synonyms":[{"name":"increased cellular GSSG level","type":"exact"},{"name":"increased cellular glutathione disulfide level during mitotic cell cycle","type":"related"},{"name":"increased cellular glutathione disulfide level during vegetative growth","type":"exact"},{"name":"increased cellular glutathione disulphide level","type":"exact"},{"name":"increased cellular oxidised glutathione level","type":"exact"},{"name":"increased glutathione disulfide accumulation","type":"related"}],"termid":"FYPO:0001111"}


id: MONDO:0014406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pancreatic agenesis in which the cause of the disease is a mutation in the PTF1A gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic agenesis","termid":"MONDO:0009832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreatic agenesis 2","secondary_identifiers":["UMLS:C4014737","OMIM:615935","DOID:0060988","GARD:16033","MEDGEN:863174"],"synonyms":[{"name":"PAGEN2","type":"related"},{"name":"PTF1A pancreatic agenesis","type":"exact"},{"name":"pancreatic agenesis 2","type":"exact"},{"name":"pancreatic agenesis caused by mutation in PTF1A","type":"exact"},{"name":"pancreatic agenesis type 2","type":"exact"},{"name":"pancreatic hypoplasia, congenital 2","type":"related"}],"termid":"MONDO:0014406","xrefs":{"Monarch":{"xref_id":"0014406"}}}


id: MONDO:0600014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of interstitial and vascular lung disease that presents as severe pulmonary hypertension and refractory hypoxemia early in life that is characterized by a lack of misalignment of the pulmonary veins.","definition_xrefs":["PMID:33766794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins anomaly","termid":"MONDO:0020295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"alveolar capillary dysplasia without misalignment of pulmonary veins","synonyms":[{"name":"ACD without misalignment","type":"exact"}],"termid":"MONDO:0600014","xrefs":{"Monarch":{"xref_id":"0600014"}}}


id: MONDO:0002365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangiopericytoma arising from the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney hemangiopericytoma","secondary_identifiers":["UMLS:C5848097","NCIT:C4527","DOID:262","SCTID:254923001","MEDGEN:1847044"],"synonyms":[{"name":"hemangiopericytoma of kidney","type":"exact"},{"name":"hemangiopericytoma of the kidney","type":"exact"},{"name":"kidney hemangiopericytoma","type":"exact"},{"name":"kidney spindle cell tumor","type":"exact"},{"name":"kidney spindle cell tumour","type":"exact"},{"name":"renal hemangiopericytoma","type":"exact"}],"termid":"MONDO:0002365","xrefs":{"Monarch":{"xref_id":"0002365"}}}


id: FYPO:0000161
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}],"single_locus_phenotype":[{"annotations":[121353,121366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121257,121427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which contractile ring assembly is abnormal. Contractile ring assembly is the part of cytokinesis in which the actomyosin contractile ring is formed of actin, myosin, and associated proteins.","definition_xrefs":["PomBase:mah","GO:1903475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null},"genotype_count":3,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0005447","FYPO:0004803","FYPO:0001320","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_02392","SJAG_01143"],"name":"abnormal actomyosin contractile ring assembly","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_01143","SJAG_02592"],"single_locus_genotype_uniquenames":["sty1delta","mid1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring assembly during vegetative growth","type":"exact"},{"name":"abnormal actomyosin contractile ring formation","type":"related"},{"name":"abnormal contractile ring assembly","type":"exact"},{"name":"abnormal cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic contractile ring assembly","type":"exact"},{"name":"abnormal cytokinetic ring assembly","type":"related"},{"name":"abnormal cytokinetic ring formation","type":"related"},{"name":"abnormal mitotic contractile ring assembly","type":"exact"}],"termid":"FYPO:0000161","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000248":null,"FYPO:0000729":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null}}


id: PBO:0087373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR protein kinase (SRPK); involved in mRNA 3' splice site recognition with Prp8p and Cdc40p; phosphorylates one or more SR dipeptides on mRNA export factors Npl3p and Gbp2p to stimulate cytoplasmic release of mRNA and Mtr10p-mediated nuclear reimport; component of stress granules that regulates granule disassembly during recovery from stress; modulates cation uptake and homeostasis through membrane transporters; contains prion-like domains; similar to human SRPK1","termid":"PBO:0087373"}


id: PBO:0044540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DXZ4 associated non-coding transcript 1, proximal","termid":"PBO:0044540"}


id: FYPO:0007194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more mitochondria than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"mitochondria present in increased numbers","synonyms":[{"name":"extra mitochondria during vegetative growth","type":"exact"},{"name":"increased number of mitochondria during vegetative growth","type":"exact"},{"name":"mitochondria present in increased numbers during mitotic cell cycle","type":"related"},{"name":"mitochondria present in increased numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0007194"}


id: PR:O13973
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrp10 gene.","definition_xrefs":["UniProtKB:O13973","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein mrp10, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.13c","synonyms":[{"name":"Spom972h-mrp10","type":"exact"}],"termid":"PR:O13973"}


id: PBO:0109024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HHLA1 neighbor of OC90","termid":"PBO:0109024"}


id: PBO:0081709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF628 divergent transcript","termid":"PBO:0081709"}


id: FYPO:0000221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A transcription regulation phenotype observed in the vegetative growth phase of the life cycle in which the transcription of specific genes is regulated in response to the loss of mitochondrial DNA.","definition_xrefs":["PomBase:mah","PMID:17868468"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription regulation phenotype, adaptive response to loss of mtDNA (obsolete FYPO:0000221)","synonyms":[{"name":"adaptive expression responses","type":"exact"},{"name":"fission yeast transcription regulation phenotype, adaptive response to loss of mtDNA","type":"exact"},{"name":"transcription regulation phenotype, adaptive response to loss of mtDNA during mitotic cell cycle","type":"related"},{"name":"transcription regulation phenotype, adaptive response to loss of mtDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0000221"}


id: GO:0061395
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter in response to arsenic-containing substance (obsolete GO:0061395)","termid":"GO:0061395"}


id: PBO:0057419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548u","termid":"PBO:0057419"}


id: PBO:0034493
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore_during_meiosis_I","termid":"PBO:0034493"}


id: PBO:0078222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 10-3","termid":"PBO:0078222"}


id: PBO:0079246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 21A","termid":"PBO:0079246"}


id: SO:0001204
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region (DNA) to which Bacteriophage RNA polymerase binds, to begin transcription.","definition_xrefs":["xenbase:jb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral_promoter","termid":"SO:0002311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phage_RNA_Polymerase_Promoter","synonyms":[{"name":"Phage RNA Polymerase Promoter","type":"exact"}],"termid":"SO:0001204"}


id: PBO:0031737
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mating_type_switching","termid":"PBO:0031737"}


id: GO:0098506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of removing one or more phosphate groups from the 3' end of a polynucleotide.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound metabolic process","termid":"GO:0006139"},{"relation_name":"is_a","term_name":"dephosphorylation","termid":"GO:0016311"},{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polynucleotide 3' dephosphorylation","termid":"GO:0098506"}


id: MOD:00827
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and an L-cysteine residue by a thioester bond to form S-(L-tyrosyl)-L-cysteine.","definition_xrefs":["RESID:AA0416","PubMed:11807079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioester crosslinked residues","termid":"MOD:00395"},{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(L-tyrosyl)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-([(2S)-2-amino-3-(4-hydroxyphenyl)propanoyl]sulfanyl)propanoic acid","type":"exact"},{"name":"CROSSLNK Tyrosyl cysteine thioester (Cys-Tyr)","type":"exact"},{"name":"S-(L-tyrosyl)-L-cysteine","type":"exact"},{"name":"S-[2-amino-3-(4-hydoxyphenyl)propanoyl]cysteine","type":"exact"},{"name":"XLNK1TyrSCys","type":"exact"},{"name":"tyrosine cysteine thioester","type":"exact"}],"termid":"MOD:00827"}


id: GO:0021624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the oculomotor nerve. This process pertains to the physical shaping of a rudimentary structure. This motor nerve innervates all extraocular muscles except the superior oblique and the lateral rectus muscles. The superior division supplies the levator palpebrae superioris and superior rectus muscles. The inferior division supplies the medial rectus, inferior rectus and inferior oblique muscles. This nerve also innervates the striated muscles of the eyelid. Pupillary constriction and lens movement are mediated by this nerve for near vision. In the orbit the inferior division sends branches that enter the ciliary ganglion where they form functional contacts (synapses) with the ganglion cells. The ganglion cells send nerve fibers into the back of the eye where they travel to ultimately innervate the ciliary muscle and the constrictor pupillae muscle.","definition_xrefs":["GOC:jid","ISBN:0838580343","GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve structural organization","termid":"GO:0021604"},{"relation_name":"part_of","term_name":"oculomotor nerve morphogenesis","termid":"GO:0021622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oculomotor nerve structural organization","synonyms":[{"name":"CN III structural organization","type":"related"},{"name":"oculomotor nerve structural organisation","type":"exact"}],"termid":"GO:0021624"}


id: MONDO:0008418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic sclerosis","termid":"MONDO:0005100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"scleroderma, familial progressive","secondary_identifiers":["UMLS:C1866983","OMIM:181750","MEDGEN:356661"],"synonyms":[{"name":"Crest syndrome","type":"related"},{"name":"scleroderma, familial progressive","type":"exact"},{"name":"systemic sclerosis, susceptibility to","type":"related"}],"termid":"MONDO:0008418","xrefs":{"Monarch":{"xref_id":"0008418"}}}


id: PBO:0041835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 15","termid":"PBO:0041835"}


id: GO:0033606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a chemokine receptor within a lipid bilayer.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport within lipid bilayer","termid":"GO:0032594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"chemokine receptor transport within lipid bilayer","synonyms":[{"name":"chemokine receptor translocation within membrane","type":"exact"}],"termid":"GO:0033606"}


id: GO:0030366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the conversion of precursor Z to molybdopterin, the final step in molybdopterin biosynthesis.","definition_xrefs":["PMID:8514783","PMID:18154309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfurtransferase activity","termid":"GO:0016783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016782","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"molybdopterin synthase activity","secondary_identifiers":["EC:2.8.1.12","Reactome:R-HSA-947541","RHEA:26333"],"termid":"GO:0030366"}


id: PBO:0058450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5089","termid":"PBO:0058450"}


id: SO:0001033
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the genome of a chloroplast, a photosynthetic plastid.","direct_ancestors":[{"relation_name":"has_quality","term_name":"DNA","termid":"SO:0000352"},{"relation_name":"is_a","term_name":"chloroplast_sequence","termid":"SO:0000745"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_DNA","synonyms":[{"name":"chloroplast DNA","type":"exact"}],"termid":"SO:0001033"}


id: SO:0001082
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Incompatibility in the sequence due to some experimental problem.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"remark","termid":"SO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polypeptide_sequencing_information","secondary_identifiers":["BS:00125"],"synonyms":[{"name":"sequencing_information","type":"exact"}],"termid":"SO:0001082"}


id: FYPO:0006462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which histone H2A phosphorylation occurs to a greater extent than normal at the silent mating-type cassette during the first meiotic nuclear division. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PMID:19965387","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein phosphorylation during meiosis I","termid":"FYPO:0003565"},{"relation_name":"is_a","term_name":"abnormal protein modification during meiotic cell cycle","termid":"FYPO:0006459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H2A phosphorylation at silent mating-type cassette during meiosis I","synonyms":[{"name":"increased histone H2A phosphorylation at silent mating-type cassette during first meiotic nuclear division","type":"exact"},{"name":"increased histone H2A phosphorylation at silent mating-type region during meiosis I","type":"exact"}],"termid":"FYPO:0006462"}


id: PBO:0054534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1934","termid":"PBO:0054534"}


id: PBO:0039904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac/Cdc42 guanine nucleotide exchange factor 6","termid":"PBO:0039904"}


id: PR:Q9P6N2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ptf1 gene.","definition_xrefs":["UniProtKB:Q9P6N2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pdp3-interacting factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC823.14","synonyms":[{"name":"Spom972h-ptf1","type":"exact"}],"termid":"PR:Q9P6N2"}


id: MONDO:0017634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior uveitis","termid":"MONDO:0006651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"non-infectious anterior uveitis","secondary_identifiers":["Orphanet:306648","UMLS:C0339317","MEDGEN:573080","SCTID:267619000","GARD:21260"],"synonyms":[{"name":"non-infectious iridocyclitis","type":"exact"}],"termid":"MONDO:0017634","xrefs":{"Monarch":{"xref_id":"0017634"}}}


id: MONDO:0001027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A gonorrhea that involves the seminal vesicle.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"vesiculitis","termid":"MONDO:0004767"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gonococcal seminal vesiculitis","secondary_identifiers":["SCTID:301990003","UMLS:C0578661","DOID:10400","icd11.foundation:1226540022","MEDGEN:662073"],"synonyms":[{"name":"gonococcal seminal vesiculitis (acute)","type":"exact"},{"name":"gonorrhea of seminal vesicle","type":"exact"},{"name":"gonorrhoea of seminal vesicle","type":"exact"},{"name":"seminal vesicle gonorrhea","type":"exact"},{"name":"seminal vesicle gonorrhoea","type":"exact"}],"termid":"MONDO:0001027","xrefs":{"Monarch":{"xref_id":"0001027"}}}


id: GO:0030875
data:
  {"annotated_genes":["SJAG_05180","SJAG_03603","SJAG_04210","SJAG_05237"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[101291,103189,117334,121214],"is_not":false,"summary":null,"term":"GO:0030875"}]},"cv_name":"cellular_component","definition":"Any of the tandem arrays of rDNA localized at the periphery of the nucleus and protruding into the nucleolus, and associated proteins. May be visible as a single or double spot by DAPI staining.","definition_xrefs":["PMID:1629244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"nucleolar chromatin","termid":"GO:0030874"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03603":null,"SJAG_04210":null,"SJAG_05180":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005730"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005730","GO:0005575","GO:0005634","GO:0005694"],"is_obsolete":false,"name":"rDNA protrusion","references_by_uniquename":{"GO_REF:0000107":null,"PMID:24184107":null},"synonyms":[{"name":"ribosomal DNA protrusion","type":"exact"}],"termid":"GO:0030875","terms_by_termid":{"GO:0030875":null}}


id: GO:2000712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of maintenance of meiotic sister chromatid cohesion along the chromosome arms.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:2000712)","synonyms":[{"name":"regulation of maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"regulation of maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:2000712"}


id: GO:0050366
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-CoA + tyramine = CoA + N-feruloyltyramine.","definition_xrefs":["EC:2.3.1.110","MetaCyc:TYRAMINE-N-FERULOYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tyramine N-feruloyltransferase activity","secondary_identifiers":["RHEA:19685"],"synonyms":[{"name":"feruloyl-CoA tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"feruloyl-CoA:tyramine N-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"feruloyltyramine synthase activity","type":"related"},{"name":"tyramine N-feruloyl-CoA transferase activity","type":"related"},{"name":"tyramine feruloyltransferase activity","type":"related"}],"termid":"GO:0050366"}


id: PBO:0031329
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_chlorpropham","termid":"PBO:0031329"}


id: MONDO:0023609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"le Marec-Bracq-Picaud syndrome","secondary_identifiers":["MEDGEN:444043","MESH:C536997","UMLS:C2931385"],"synonyms":[{"name":"complex malformation syndrome with brachymesomelia","type":"related"}],"termid":"MONDO:0023609","xrefs":{"Monarch":{"xref_id":"0023609"}}}


id: MONDO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the kidney. Representative examples include cystic nephroma, metanephric adenoma, oncocytoma, and urothelial papilloma of the renal pelvis.","definition_xrefs":["NCIT:C4778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign urinary system neoplasm","termid":"MONDO:0004180"},{"relation_name":"is_a","term_name":"kidney neoplasm","termid":"MONDO:0021163"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"kidney benign neoplasm","secondary_identifiers":["ICD9:223.0","MEDGEN:96926","UMLS:C0496892","SCTID:92165001","DOID:3116","ICD10CM:D30.0"],"synonyms":[{"name":"benign kidney neoplasm","type":"exact"},{"name":"benign kidney tumor","type":"exact"},{"name":"benign kidney tumour","type":"exact"},{"name":"benign neoplasm of kidney","type":"exact"},{"name":"benign neoplasm of the kidney","type":"exact"},{"name":"benign renal neoplasm","type":"exact"},{"name":"benign renal tumor","type":"exact"},{"name":"benign renal tumour","type":"exact"},{"name":"benign tumor of kidney","type":"exact"},{"name":"benign tumor of the kidney","type":"exact"},{"name":"benign tumour of kidney","type":"exact"},{"name":"benign tumour of the kidney","type":"exact"},{"name":"kidney benign neoplasm","type":"exact"},{"name":"renal and ureteral tumor","type":"exact"},{"name":"renal and ureteral tumour","type":"exact"},{"name":"renal neoplasm, benign","type":"exact"},{"name":"renal tumor, benign","type":"exact"}],"termid":"MONDO:0002513","xrefs":{"Monarch":{"xref_id":"0002513"}}}


id: GO:0061649
data:
  {"annotated_genes":["SJAG_04574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112552],"is_not":false,"summary":null,"term":"GO:0061649"}]},"cv_name":"molecular_function","definition":"A histone reader that recognizes a histone bearing a ubiquinated lysine residue.","definition_xrefs":["PMID:24526689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-modified protein reader activity","termid":"GO:0140036"},{"relation_name":"is_a","term_name":"histone reader activity","termid":"GO:0140566"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030674","GO:0060090","GO:0140566","GO:0003674"],"is_obsolete":false,"name":"ubiquitin-modified histone reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ubiquitin modification-dependent histone binding","type":"exact"},{"name":"ubiquitinated histone binding","type":"related"}],"termid":"GO:0061649","terms_by_termid":{"GO:0061649":null}}


id: PBO:0086892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative transmembrane protein involved in the biotin biosynthesis; responsible for uptake of 7-keto 8-aminopelargonic acid; BIO5 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis","termid":"PBO:0086892"}


id: PBO:0044055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin SA","termid":"PBO:0044055"}


id: GO:0019184
data:
  {"annotated_genes":["SJAG_00792","SJAG_00469","SJAG_01351","SJAG_00988","SJAG_02599","SJAG_03494","SJAG_04031","SJAG_04032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96121,107422,59860],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[58192,79386,80689,110470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[96067],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The biosynthetic process in which peptide bond formation occurs in the absence of the translational machinery. Examples include the synthesis of antibiotic peptides, and glutathione.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide biosynthetic process","termid":"GO:0043043"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonribosomal peptide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"non-ribosomal peptide biosynthesis","type":"exact"},{"name":"non-ribosomal peptide biosynthetic process","type":"exact"},{"name":"non-ribosomal peptide formation","type":"exact"},{"name":"non-ribosomal peptide synthesis","type":"exact"},{"name":"nonribosomal peptide anabolism","type":"exact"},{"name":"nonribosomal peptide biosynthesis","type":"exact"},{"name":"nonribosomal peptide formation","type":"exact"},{"name":"nonribosomal peptide synthesis","type":"exact"},{"name":"nonribosomal peptide synthetase","type":"related"}],"termid":"GO:0019184","terms_by_termid":{"GO:0006750":null,"GO:0031169":null,"GO:1905569":null}}


id: PBO:0058636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6768","termid":"PBO:0058636"}


id: PBO:0031269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actomyosin_contractile_ring_assembly","termid":"PBO:0031269"}


id: PBO:0083308
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps chromosome XII telomeric element core sequences","termid":"PBO:0083308"}


id: GO:0004791
data:
  {"annotated_genes":["SJAG_04399","SJAG_03653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75202,81568],"is_not":false,"summary":null,"term":"GO:0004791"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: thioredoxin-dithiol + NADP+ = thioredoxin-disulfide + H+ + NADPH.","definition_xrefs":["RHEA:20345"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antioxidant activity","termid":"GO:0016209"},{"relation_name":"is_a","term_name":"protein-disulfide reductase [NAD(P)H] activity","termid":"GO:0047134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03653":null,"SJAG_04399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0015036"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0140096","GO:0015036","GO:0003824"],"is_obsolete":false,"name":"thioredoxin-disulfide reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-73646","Reactome:R-HSA-9617735","EC:1.8.1.9","KEGG_REACTION:R02016","MetaCyc:THIOREDOXIN-REDUCT-NADPH-RXN","Reactome:R-HSA-1222485","Reactome:R-HSA-3323050"],"synonyms":[{"name":"NADPH:oxidized thioredoxin oxidoreductase activity","type":"exact"},{"name":"thioredoxin disulfide reductase activity","type":"broad"},{"name":"thioredoxin reductase (NADPH) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase (NADP) activity","type":"exact"},{"name":"thioredoxin-disulfide reductase activity","type":"broad"},{"name":"thioredoxin-disulphide reductase activity","type":"broad"}],"termid":"GO:0004791","terms_by_termid":{"GO:0004791":null}}


id: PR:O13739
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- aro7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.04c","synonyms":[{"name":"CM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-aro7","type":"exact"}],"termid":"PR:O13739"}


id: GO:0048830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of adventitious root over time, from its formation to the mature structure. Adventitious roots are post-embryonic roots that develop from the plant shoot.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adventitious root development","termid":"GO:0048830"}


id: MONDO:0010059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete spinal muscular atrophy, type I, with congenital bone fractures (obsolete MONDO:0010059)","termid":"MONDO:0010059","xrefs":{"Monarch":{"xref_id":"0010059"}}}


id: PBO:0057958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3680-2","termid":"PBO:0057958"}


id: GO:0042643
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The actin part of any complex of actin, myosin, and accessory proteins.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete actomyosin, actin portion (obsolete GO:0042643)","termid":"GO:0042643"}


id: PBO:0055509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2943","termid":"PBO:0055509"}


id: PBO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease MRP complex subunit (predicted)","termid":"PBO:0002288"}


id: GO:0042326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or decreases the rate of addition of phosphate groups to a molecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"negatively_regulates","term_name":"phosphorylation","termid":"GO:0016310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of phosphorylation","synonyms":[{"name":"down regulation of phosphorylation","type":"exact"},{"name":"down-regulation of phosphorylation","type":"exact"},{"name":"downregulation of phosphorylation","type":"exact"},{"name":"inhibition of phosphorylation","type":"narrow"}],"termid":"GO:0042326"}


id: GO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: peptidyl-tRNA(1) + aminoacyl-tRNA(2) = tRNA(1) + peptidylaminoacyl-tRNA(2). This reaction is catalyzed by a ribozyme.","definition_xrefs":["PMID:11433365","PMID:9242921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016740","GO:0140101","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"peptidyltransferase activity","secondary_identifiers":["MetaCyc:PEPTIDYLTRANSFERASE-RXN","Reactome:R-HSA-156912","EC:2.3.2.12"],"termid":"GO:0000048"}


id: MOD:01056
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-dibromo-L-tyrosine","termid":"MOD:01023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(79)Br labeled 3',5'-dibromotyrosine","termid":"MOD:01056"}


id: PBO:0061255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide synthase trafficking","termid":"PBO:0061255"}


id: GO:0000316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of sulfite into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"sulfite transmembrane transport","synonyms":[{"name":"sulphite transport","type":"exact"}],"termid":"GO:0000316"}


id: PBO:0054410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1806","termid":"PBO:0054410"}


id: MONDO:0003109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the foramen magnum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foramen magnum meningioma","secondary_identifiers":["NCIT:C5280","UMLS:C1333630","DOID:4708","MEDGEN:232512"],"synonyms":[{"name":"foramen magnum meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of foramen magnum","type":"exact"},{"name":"meningioma of Foramen magnum","type":"exact"},{"name":"meningioma of the Foramen magnum","type":"exact"}],"termid":"MONDO:0003109","xrefs":{"Monarch":{"xref_id":"0003109"}}}


id: GO:0018795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-hydroxy-2-methyl-1,3-dicarbonate + H+ = CO2 + L-lactate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-hydroxy-2-methyl-1,3-dicarbonate decarboxylase activity (obsolete GO:0018795)","termid":"GO:0018795"}


id: MONDO:0014348
data:
  {"annotated_genes":["SJAG_01570"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88379],"is_not":false,"summary":null,"term":"MONDO:0014348"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the PGAP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01570":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 42","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014343","MEDGEN:862780","GARD:22564","OMIM:615802"],"synonyms":[{"name":"MRT42","type":"related"},{"name":"PGAP1 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in PGAP1","type":"exact"},{"name":"glycosylphosphatidylinositol biosynthesis defect 9","type":"related"},{"name":"intellectual disability, autosomal recessive 42","type":"exact"},{"name":"intellectual disability, autosomal recessive type 42","type":"exact"},{"name":"mental retardation, autosomal recessive 42","type":"related"},{"name":"mental retardation, autosomal recessive type 42","type":"exact"},{"name":"neurodevelopmental disorder with dysmorphic features, spasticity, and brain abnormalities","type":"exact"}],"termid":"MONDO:0014348","terms_by_termid":{"MONDO:0014348":null},"xrefs":{"Monarch":{"xref_id":"0014348"}}}


id: PBO:0067300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 385, pseudogene","termid":"PBO:0067300"}


id: MONDO:0006709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumor or cancer of the common bile duct including the ampulla of vater and the sphincter of oddi.","definition_xrefs":["MESH:D003138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"common bile duct disorder","termid":"MONDO:0002886"},{"relation_name":"is_a","term_name":"extrahepatic bile duct neoplasm","termid":"MONDO:0021385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"common bile duct neoplasm","secondary_identifiers":["SCTID:126857009","UMLS:C0009442","DOID:4608","MEDGEN:3178"],"synonyms":[{"name":"common bile duct neoplasm (disease)","type":"exact"},{"name":"common bile duct tumor","type":"exact"},{"name":"common bile duct tumour","type":"exact"},{"name":"neoplasm of common bile duct","type":"exact"},{"name":"tumor of common bile duct","type":"exact"},{"name":"tumour of common bile duct","type":"exact"}],"termid":"MONDO:0006709","xrefs":{"Monarch":{"xref_id":"0006709"}}}


id: PBO:0035802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H2A_phosphorylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035802"}


id: GO:0044441
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a cilium, a specialized eukaryotic organelle that consists of a filiform extrusion of the cell surface. Each cilium is bounded by an extrusion of the cytoplasmic (plasma) membrane, and contains a regular longitudinal array of microtubules, anchored basally in a centriole.","definition_xrefs":["GOC:cilia","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete ciliary part (obsolete GO:0044441)","synonyms":[{"name":"cilial part","type":"exact"},{"name":"cilium part","type":"exact"},{"name":"flagellar part","type":"narrow"},{"name":"flagellum component","type":"narrow"},{"name":"flagellum part","type":"narrow"},{"name":"microtubule-based flagellum part","type":"exact"}],"termid":"GO:0044441"}


id: PBO:0042631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 6 pseudogene","termid":"PBO:0042631"}


id: MONDO:0012865
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pseudofolliculitis barbae","secondary_identifiers":["MEDGEN:107807","MESH:C563016","UMLS:C0549150","icd11.foundation:336055701","OMIM:612318","ICD10CM:L73.1"],"synonyms":[{"name":"PFB","type":"related"},{"name":"Pseudofolliculitis barbae","type":"exact"},{"name":"ingrown hairs","type":"related"},{"name":"pili Incarnati","type":"related"},{"name":"pseudofolliculitis barbae, susceptibility to","type":"related"}],"termid":"MONDO:0012865","xrefs":{"Monarch":{"xref_id":"0012865"}}}


id: MONDO:1011557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metabolic syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic syndrome, non-human animal","termid":"MONDO:1011404"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic syndrome, horse","secondary_identifiers":["OMIA:001898-9796"],"termid":"MONDO:1011557","xrefs":{"Monarch":{"xref_id":"1011557"}}}


id: GO:0010623
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of endogenous cellular processes that result in the death of a cell as part of its development.","definition_xrefs":["GOC:tb","GOC:dph","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"is_a","term_name":"cellular developmental process","termid":"GO:0048869"},{"relation_name":"part_of","term_name":"cell development","termid":"GO:0048468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death involved in cell development","synonyms":[{"name":"developmental programmed cell death","type":"broad"},{"name":"programmed cell death involved in development","type":"broad"}],"termid":"GO:0010623"}


id: PBO:0032728
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_from_MCB_promoter","termid":"PBO:0032728"}


id: GO:0007517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the muscle over time, from its formation to the mature structure. The muscle is an organ consisting of a tissue made up of various elongated cells that are specialized to contract and thus to produce movement and mechanical work.","definition_xrefs":["GOC:jid","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle organ development","termid":"GO:0007517"}


id: SO:0001931
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA sequence produced from some base calling or alignment algorithm which uses aligned or assembled multiple gDNA sequences as input.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"consensus_region","termid":"SO:0000994"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"consensus_gDNA","synonyms":[{"name":"consensus gDNA","type":"exact"},{"name":"consensus genomic DNA","type":"exact"}],"termid":"SO:0001931"}


id: PBO:0044897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEPTOR antisense RNA 1","termid":"PBO:0044897"}


id: MONDO:0859689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"hepatobiliary benign neoplasm","secondary_identifiers":["DOID:3117"],"termid":"MONDO:0859689","xrefs":{"Monarch":{"xref_id":"0859689"}}}


id: PBO:0034221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_muscle_insertion","termid":"PBO:0034221"}


id: PBO:0048342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 53","termid":"PBO:0048342"}


id: GO:0098675
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the neuronal dense core vesicle membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:mah","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of neuronal dense core vesicle membrane (obsolete GO:0098675)","synonyms":[{"name":"intrinsic to neuronal dense core granule membrane","type":"exact"}],"termid":"GO:0098675"}


id: GO:0009917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a C-5 double bond in the B ring of a sterol.","definition_xrefs":["ISBN:0943088399"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol 5-alpha reductase activity (obsolete GO:0009917)","termid":"GO:0009917"}


id: GO:0016839
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a carbon-oxygen bond. Enzymes with this activity are 'miscellaneous' carbon-oxygen lyases that cannot be grouped into one of the specific subclasses of the carbon-oxygen lyases.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-oxygen lyase activity (obsolete GO:0016839)","synonyms":[{"name":"other carbon-oxygen lyase activity","type":"exact"}],"termid":"GO:0016839"}


id: PBO:0065142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prolactin releasing hormone","termid":"PBO:0065142"}


id: PBO:0078703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (CAA) 5-1","termid":"PBO:0078703"}


id: GO:0004587
data:
  {"annotated_genes":["SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80343],"is_not":false,"summary":null,"term":"GO:0004587"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-oxocarboxylate + L-ornithine = an L-alpha-amino acid + L-glutamate 5-semialdehyde.","definition_xrefs":["EC:2.6.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"ornithine aminotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:13877","Reactome:R-HSA-70654","Reactome:R-HSA-70666","MetaCyc:ORNITHINE--OXO-ACID-AMINOTRANSFERASE-RXN"],"synonyms":[{"name":"GabT","type":"related"},{"name":"L-ornithine 5-aminotransferase activity","type":"related"},{"name":"L-ornithine aminotransferase activity","type":"related"},{"name":"L-ornithine:2-oxo-acid aminotransferase activity","type":"related"},{"name":"L-ornithine:alpha-ketoglutarate delta-aminotransferase activity","type":"related"},{"name":"OAT","type":"related"},{"name":"ornithine 5-aminotransferase activity","type":"related"},{"name":"ornithine delta-transaminase activity","type":"related"},{"name":"ornithine ketoacid aminotransferase activity","type":"related"},{"name":"ornithine transaminase activity","type":"related"},{"name":"ornithine(lysine) transaminase activity","type":"related"},{"name":"ornithine--2-oxoacid aminotransferase activity","type":"related"},{"name":"ornithine--alpha-ketoglutarate aminotransferase activity","type":"related"},{"name":"ornithine--keto acid aminotransferase activity","type":"related"},{"name":"ornithine--keto acid transaminase activity","type":"related"},{"name":"ornithine--ketoglutarate aminotransferase activity","type":"related"},{"name":"ornithine--oxo acid aminotransferase activity","type":"related"},{"name":"ornithine--oxo-acid transaminase activity","type":"related"},{"name":"ornithine-oxo-acid aminotransferase activity","type":"exact"},{"name":"ornithine-oxo-acid transaminase activity","type":"related"},{"name":"ornithine:alpha-oxoglutarate transaminase activity","type":"related"}],"termid":"GO:0004587","terms_by_termid":{"GO:0004587":null}}


id: PBO:0004652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortical component Lsb5 (predicted)","termid":"PBO:0004652"}


id: SO:0001134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type I:A motif of four consecutive residues that may contain one H-bond, which, if present, is between the main-chain CO of the first residue and the main-chain NH of the fourth. It is characterized by the dihedral angles:- Residue(i+1): -140 degrees > phi > -20 degrees, -90 degrees > psi > +40 degrees. Residue(i+2): -140 degrees > phi > -20 degrees, -90 degrees > psi > +40 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_turn","termid":"SO:0001133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_turn_left_handed_type_one","secondary_identifiers":["BS:00215"],"synonyms":[{"name":"beta turn left handed type one","type":"exact"},{"name":"beta_turn_il","type":"exact"},{"name":"type I' beta turn","type":"exact"},{"name":"type I' turn","type":"exact"}],"termid":"SO:0001134"}


id: PBO:0061629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 12","termid":"PBO:0061629"}


id: GO:0034633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of retinol into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Retinol is vitamin A1, 2,6,6-trimethyl-1-(9'-hydroxy-3',7'-dimethylnona-1',3',5',7'-tetraenyl)cyclohex-1-ene, one of the three components that makes up vitamin A.","definition_xrefs":["GOC:vk","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"terpenoid transport","termid":"GO:0046865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"retinol transport","synonyms":[{"name":"vitamin A1 transport","type":"exact"}],"termid":"GO:0034633"}


id: MONDO:1010558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spina bifida that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida, non-human animal","termid":"MONDO:1010047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spina bifida, cattle","secondary_identifiers":["OMIA:000933-9913"],"termid":"MONDO:1010558","xrefs":{"Monarch":{"xref_id":"1010558"}}}


id: GO:0160080
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + indole(in) = ADP + phosphate + indole(out).","definition_xrefs":["PMID:37146609"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type indole transporter activity","termid":"GO:0160080"}


id: PBO:0076345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 12","termid":"PBO:0076345"}


id: PBO:0043186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citron rho-interacting serine/threonine kinase","termid":"PBO:0043186"}


id: PBO:0067642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 815, pseudogene","termid":"PBO:0067642"}


id: GO:0061698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a glutaryl group (CO-CH2-CH2-CH2-CO) from a residue in a peptide or protein.","definition_xrefs":["PMID:24703693","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deacylation","termid":"GO:0035601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein deglutarylation","termid":"GO:0061698"}


id: GO:1902124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-pinoresinol.","definition_xrefs":["PMID:8910615","GOC:TermGenie","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan metabolic process","termid":"GO:0009806"},{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-pinoresinol metabolic process","synonyms":[{"name":"(+)-pinoresinol metabolism","type":"exact"}],"termid":"GO:1902124"}


id: MONDO:0009586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mesangial sclerosis, diffuse renal, with ocular abnormalities (obsolete MONDO:0009586)","termid":"MONDO:0009586","xrefs":{"Monarch":{"xref_id":"0009586"}}}


id: GO:0018644
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: toluene + H+ + NADH + O2 = 2-hydroxytoluene + H2O + NAD+.","definition_xrefs":["RHEA:20349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"toluene 2-monooxygenase activity","secondary_identifiers":["MetaCyc:TOLUENE-2-MONOOXYGENASE-RXN","UM-BBD_enzymeID:r0260","EC:1.14.13.243"],"termid":"GO:0018644"}


id: PBO:0063900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class W","termid":"PBO:0063900"}


id: PBO:0075636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2F","termid":"PBO:0075636"}


id: PBO:0084183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone deacetylase and subunit of Set3 and Rpd3L complexes; required for gene activation via specific deacetylation of lysines in H3 and H4 histone tails; subunit of the Set3 complex, a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; co-localizes with Cmr1p in nuclear foci in response to DNA damage by MMS","termid":"PBO:0084183"}


id: SO:0000001
data:
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id: MONDO:0024280
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arthritis affecting five or more separate joints.","definition_xrefs":["NCIT:C26996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarticular arthritis","secondary_identifiers":["MEDGEN:56408","SCTID:416956002","UMLS:C0162323"],"synonyms":[{"name":"polyarthritis","type":"exact"},{"name":"polyarticular arthritis","type":"exact"}],"termid":"MONDO:0024280","xrefs":{"Monarch":{"xref_id":"0024280"}}}


id: MOD:01954
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  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-selenocysteine residue to dehydroalanine.","definition_xrefs":["PubMed:22031445","ChEBI:17123","PubMed:20805503","PubMed:21420488","PubMed:7947813","PubMed:1547888","PubMed:10220322","PubMed:8239649","PubMed:1815586","RESID:AA0181","PubMed:12781460","PubMed:2914619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-selenocysteine residue","termid":"MOD:01158"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Sec)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dha","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"dehydroalanine","type":"exact"}],"termid":"MOD:01954"}


id: GO:0046179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of keto-D-gluconate, the anion of keto-D-gluconic acid, an aldonic acid derived from glucose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketogluconate biosynthetic process","termid":"GO:0046180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"keto-D-gluconate biosynthetic process","synonyms":[{"name":"keto-D-gluconate anabolism","type":"exact"},{"name":"keto-D-gluconate biosynthesis","type":"exact"},{"name":"keto-D-gluconate formation","type":"exact"},{"name":"keto-D-gluconate synthesis","type":"exact"}],"termid":"GO:0046179"}


id: PBO:0046275
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"essential meiotic structure-specific endonuclease subunit 2","termid":"PBO:0046275"}


id: PBO:0042647
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 22 pseudogene","termid":"PBO:0042647"}


id: GO:0016241
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  {"annotated_genes":["SJAG_04496","SJAG_04435","SJAG_02723","SJAG_01716","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108684],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016242"},{"annotations":[99634],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901098"},{"annotations":[77346,108289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016239"},{"annotations":[91532],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of macroautophagy.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"regulates","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01716":null,"SJAG_02433":null,"SJAG_02723":null,"SJAG_04435":null,"SJAG_04496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of macroautophagy","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of starvation-induced autophagy","type":"exact"}],"termid":"GO:0016241","terms_by_termid":{"GO:0016239":null,"GO:0016242":null,"GO:0140501":null,"GO:1901098":null}}


id: GO:0000449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage of a pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the Large Subunit (LSU) rRNA, and the 5S rRNA, in that order, from 5' to 3' along the primary transcript. For example, primary ribosomal RNA transcripts containing three genes, in this order, are produced in E. coli and other prokaryotic species. Note that the use of the word tricistronic refers only to the number of mature rRNA molecules which will be produced from the primary transcript and ignores tRNAs that may also be present within the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0042254","GO:0044085"],"is_obsolete":false,"name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, LSU-rRNA, 5S)","termid":"GO:0000449"}


id: FYPO:0000390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which traversing the start control point of the mitotic cell cycle begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"},{"relation_name":"is_a","term_name":"premature cell cycle phase transition","termid":"FYPO:0000827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000631","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"premature passage through START of mitotic cell cycle","synonyms":[{"name":"advanced passage through START of mitotic cell cycle","type":"exact"},{"name":"cell cycle passage through START: increased rate","type":"related"},{"name":"premature mitotic cell cycle passage through START","type":"exact"},{"name":"premature passage through START of mitotic cell cycle during vegetative growth","type":"exact"}],"termid":"FYPO:0000390"}


id: GO:0010232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances, into, out of or within a cell, either in a vascular tissue or in the vascular membrane.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular process in circulatory system","termid":"GO:0003018"},{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"vascular transport","termid":"GO:0010232"}


id: MONDO:0015847
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare vaginal malformation (obsolete MONDO:0015847)","secondary_identifiers":["Orphanet:180151"],"termid":"MONDO:0015847","xrefs":{"Monarch":{"xref_id":"0015847"}}}


id: MONDO:0017893
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of acute myeloid leukemia that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"inherited acute myeloid leukemia","secondary_identifiers":["MEDGEN:1634915","UMLS:C4707228","Orphanet:319465","GARD:17450","NCIT:C7175","SCTID:764940002"],"synonyms":[{"name":"Pure familial AML","type":"exact"},{"name":"Pure familial acute myeloid leukaemia","type":"exact"},{"name":"Pure familial acute myeloid leukemia","type":"exact"},{"name":"familial AML","type":"exact"},{"name":"hereditary acute myeloid leukaemia","type":"exact"},{"name":"hereditary acute myeloid leukemia","type":"exact"},{"name":"inherited AML","type":"exact"}],"termid":"MONDO:0017893","xrefs":{"Monarch":{"xref_id":"0017893"}}}


id: PBO:0003938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II accessory factor, Cdc73 family (predicted)","termid":"PBO:0003938"}


id: PBO:0038317
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"authors","termid":"PBO:0038317"}


id: PBO:0080488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 7","termid":"PBO:0080488"}


id: PBO:0028179
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_splicing","termid":"PBO:0028179"}


id: GO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a transmembrane ephrin to initiate a change in cell activity.","definition_xrefs":["PMID:9530499","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ephrin receptor activity","termid":"GO:0005003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0016740","GO:0003674","GO:0038023","GO:0016301","GO:0004672","GO:0003824"],"is_obsolete":false,"name":"transmembrane-ephrin receptor activity","synonyms":[{"name":"transmembrane-Eph receptor activity","type":"exact"}],"termid":"GO:0005005"}


id: PBO:0110980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fucosyltransferase 2 (H blood group)","termid":"PBO:0110980"}


id: MONDO:0017616
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked intellectual disability, Schutz type","secondary_identifiers":["Orphanet:3062"],"termid":"MONDO:0017616","xrefs":{"Monarch":{"xref_id":"0017616"}}}


id: GO:0046545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary female sexual characteristics over time, from their formation to the mature structure. The primary female sexual characteristics are the ovaries, and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of primary sexual characteristics","termid":"GO:0045137"},{"relation_name":"part_of","term_name":"female sex differentiation","termid":"GO:0046660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary female sexual characteristics","termid":"GO:0046545"}


id: PBO:0047360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 14","termid":"PBO:0047360"}


id: MONDO:0007896
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute monoblastic leukemia (AML-M5), is one of the most common subtypes of acute myeloid leukemia (AML) that is either comprised of more than 80% of monoblasts (AML-M5a) or 30-80% monoblasts with (pro)monocytic differentiation (AML-M5b). AML-M5 presents with asthenia, pallor, fever, and dizziness. Specific features of AML-M5 include hyperleukocytosis, propensity for extramedullary infiltrates, coagulation abnormalities including disseminated intravascular coagulation and neurological disorders. Leukemia cutis and gingival infiltration can also be seen. A characteristic translocation observed in AML-M5 is t(9;11).","definition_xrefs":["Orphanet:514"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bilineal acute myeloid leukemia","termid":"MONDO:0011118"},{"relation_name":"is_a","term_name":"monocytic leukemia","termid":"MONDO:0004600"},{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"acute monocytic leukemia","secondary_identifiers":["MedDRA:10059439","EFO:0000221","icd11.foundation:517546180","GARD:525","ICD9:206.0","CSP:2004-2820","MEDGEN:7319","UMLS:C0023465","DOID:8864","ICDO:9891/3","MedDRA:10000871","ICD10CM:C93.0","SCTID:413441006","NANDO:2200008","NANDO:2200009","OMIM:151380","NCIT:C4861","ONCOTREE:AMOL","MESH:D007948"],"synonyms":[{"name":"AML M5","type":"exact"},{"name":"AML-M5","type":"related"},{"name":"acute monoblastic leukaemia","type":"related"},{"name":"acute monoblastic leukaemia and acute monocytic leukaemia","type":"exact"},{"name":"acute monoblastic leukemia","type":"related"},{"name":"acute monoblastic leukemia and acute monocytic leukemia","type":"exact"},{"name":"acute monoblastic/monocytic leukaemia","type":"related"},{"name":"acute monoblastic/monocytic leukemia","type":"related"},{"name":"acute monocytic leukaemia (FAB M5B)","type":"exact"},{"name":"acute monocytic leukaemia (FAB M5b)","type":"exact"},{"name":"acute monocytic leukaemia without mention of remission","type":"exact"},{"name":"acute monocytic leukemia","type":"exact"},{"name":"acute monocytic leukemia (FAB M5B)","type":"exact"},{"name":"acute monocytic leukemia (FAB M5b)","type":"exact"},{"name":"acute monocytic leukemia without mention of remission","type":"exact"},{"name":"acute monocytic leukemia, FAB M5","type":"exact"},{"name":"acute monocytic leukemia, morphology","type":"exact"},{"name":"acute monocytic leukemia, morphology (morphologic abnormality)","type":"exact"},{"name":"acute myeloblastic leukaemia type 5","type":"related"},{"name":"acute myeloblastic leukemia type 5","type":"related"},{"name":"leukemia, acute monocytic","type":"related"},{"name":"leukemia, monocytic, malignant","type":"exact"},{"name":"monocytic leukaemia","type":"broad"},{"name":"monocytic leukemia","type":"broad"},{"name":"monocytic leukemia, acute","type":"exact"}],"termid":"MONDO:0007896","xrefs":{"Monarch":{"xref_id":"0007896"}}}


id: PBO:0113313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in proteolytic activation of Rim101p; part of response to alkaline pH; PalA/AIP1/Alix family member; interaction with the ESCRT-III subunit Snf7p suggests a relationship between pH response and multivesicular body formation; localizes to cytosol, nucleus and peroxisomes","termid":"PBO:0113313"}


id: MONDO:0100505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dermatitis caused by an allergic reaction to ingested food.","definition_xrefs":["NCIT:C34534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"food dermatitis","synonyms":[{"name":"dermatitis due to food taken internally","type":"exact"}],"termid":"MONDO:0100505","xrefs":{"Monarch":{"xref_id":"0100505"}}}


id: FYPO:0001756
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal protein phosphatase activity","synonyms":[{"name":"abnormal phosphoprotein phosphatase activity","type":"exact"}],"termid":"FYPO:0001756"}


id: PBO:0072463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 27","termid":"PBO:0072463"}


id: GO:0009326
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the dehydrogenation of formate to produce carbon dioxide (CO2).","definition_xrefs":["PMID:1504073","PMID:8566699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"formate dehydrogenase complex","termid":"GO:0009326"}


id: GO:0001559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the size of the nucleus with respect to the cytoplasm modulates the frequency, rate or extent of cell growth, the irreversible increase in size of a cell over time.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cell growth by detection of nuclear:cytoplasmic ratio (obsolete GO:0001559)","synonyms":[{"name":"detection of nuclear:cytoplasmic ratio to regulate cell growth","type":"exact"},{"name":"interpretation of nuclear:cytoplasmic ratio to regulate cell growth","type":"exact"},{"name":"regulation of cell growth by nuclear:cytoplasmic ratio","type":"exact"},{"name":"regulation of cell growth by sensing of nuclear:cytoplasmic ratio","type":"exact"}],"termid":"GO:0001559"}


id: PBO:0044558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein assembly factor with WD repeats 1","termid":"PBO:0044558"}


id: PBO:0064633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPARG coactivator 1 beta","termid":"PBO:0064633"}


id: PBO:0042547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 11B","termid":"PBO:0042547"}


id: MONDO:0008704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short-limb skeletal dysplasia with severe combined immunodeficiency is an extremely rare type of SCID characterized by the classical signs of T-B- SCID (severe and recurrent infections, diarrhea, failure to thrive, absence of T and B lymphocytes), associated with skeletal anomalies like short stature, bowing of the long bones and metaphyseal abnormalities of variable degree of severity.","definition_xrefs":["Orphanet:935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"short-limb skeletal dysplasia with severe combined immunodeficiency","secondary_identifiers":["icd11.foundation:469016488","MEDGEN:348040","GARD:2988","MESH:C565984","UMLS:C1860168","OMIM:200900"],"synonyms":[{"name":"SLSD with SCID","type":"related"},{"name":"Slsd with SCID","type":"related"},{"name":"achondroplasia and Swiss type agammaglobulinemia","type":"related"},{"name":"achondroplasia and Swiss-type agammaglobulinemia","type":"related"},{"name":"achondroplasia and severe combined immunodeficiency","type":"related"},{"name":"achondroplasia so-called and severe combined immunodeficiency","type":"related"},{"name":"achondroplasia, so-called, and severe combined immunodeficiency","type":"related"},{"name":"achondroplasia-SCID syndrome","type":"exact"},{"name":"achondroplasia-Swiss type agammaglobulinemia syndrome","type":"exact"},{"name":"achondroplasia-severe combined immunodeficiency syndrome","type":"exact"},{"name":"agammaglobulinemia and achondroplasia","type":"related"},{"name":"immunodeficiency-short limb dwarfism syndrome","type":"exact"},{"name":"short limb skeletal dysplasia with SCID","type":"exact"},{"name":"short-limb skeletal dysplasia with severe combined immunodeficiency","type":"exact"}],"termid":"MONDO:0008704","xrefs":{"Monarch":{"xref_id":"0008704"}}}


id: PBO:0017881
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"itsy bitsy phosphatase","termid":"PBO:0017881"}


id: PBO:0074855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 43","termid":"PBO:0074855"}


id: MONDO:1012451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal cobalamin (vitamin B12) malabsorption, non-human animal","termid":"MONDO:1011719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intestinal cobalamin (vitamin B12) malabsorption, dog","secondary_identifiers":["OMIA:001791-9615"],"termid":"MONDO:1012451","xrefs":{"Monarch":{"xref_id":"1012451"}}}


id: PBO:0002400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia induced family protein","termid":"PBO:0002400"}


id: PBO:0040781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bet1 golgi vesicular membrane trafficking protein like","termid":"PBO:0040781"}


id: PBO:0039646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP1B1 pseudogene 2","termid":"PBO:0039646"}


id: PBO:0083436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the uncharacterized ORF YNL108C","termid":"PBO:0083436"}


id: GO:0005225
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a monoatomic anion by a volume-sensitive channel. A volume-sensitive channel is a channel that responds to changes in the volume of a cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion channel activity","termid":"GO:0005253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"volume-sensitive anion channel activity","secondary_identifiers":["Reactome:R-HSA-8941543"],"synonyms":[{"name":"volume-regulated channel","type":"broad"}],"termid":"GO:0005225"}


id: MONDO:0002143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare yolk sac tumor that arises from the vagina. Patients present with abnormal vaginal bleeding or bloody discharge.","definition_xrefs":["NCIT:C6379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yolk sac tumor","termid":"MONDO:0005744"},{"relation_name":"is_a","term_name":"vaginal germ cell malignant tumor","termid":"MONDO:0016094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vaginal yolk sac tumor","secondary_identifiers":["MEDGEN:234985","DOID:1910","ONCOTREE:VYST","UMLS:C1336945"],"synonyms":[{"name":"vaginal endodermal sinus neoplasm","type":"exact"},{"name":"vaginal endodermal sinus tumor","type":"exact"},{"name":"vaginal endodermal sinus tumour","type":"exact"},{"name":"vaginal yolk Sac neoplasm","type":"exact"},{"name":"vaginal yolk Sac tumor","type":"exact"},{"name":"vaginal yolk Sac tumour","type":"exact"},{"name":"yolk sac tumor","type":"related"},{"name":"yolk sac tumour","type":"related"}],"termid":"MONDO:0002143","xrefs":{"Monarch":{"xref_id":"0002143"}}}


id: GO:0070770
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphaIIb-beta3 integrin complex bound to the cell surface antigen CD47 and the kinase FAK.","definition_xrefs":["PMID:9169439"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"alphaIIb-beta3 integrin-CD47-FAK complex","synonyms":[{"name":"ITGA2b-ITGB3-CD47-FAK complex","type":"narrow"}],"termid":"GO:0070770"}


id: PBO:0082299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aromatic aminotransferase II; catalyzes the first step of tryptophan, phenylalanine, and tyrosine catabolism; involved with Aro8p in production of kynurenic acid to detoxify excess tryptophan","termid":"PBO:0082299"}


id: MONDO:0007004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Group of diseases mediated by the deposition of large soluble complexes of antigen and antibody with resultant damage to tissue. Besides serum sickness and the arthus reaction, evidence supports a pathogenic role for immune complexes in many other immune system diseases including glomerulonephritis, systemic lupus erythematosus (lupus erythematosus, systemic) and polyarteritis nodosa.","definition_xrefs":["MESH:D007105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type III hypersensitivity disease","secondary_identifiers":["NCIT:C114346","MedDRA:10045265","DOID:1557","EFO:1001222","MEDGEN:7021","UMLS:C0020951"],"synonyms":[{"name":"disorder of type III hypersensitivity","type":"exact"},{"name":"hypersensitivity reaction type III disease","type":"related"},{"name":"immune complex disease","type":"exact"},{"name":"type 3 hypersensitivity reaction","type":"exact"},{"name":"type III hypersensitivity","type":"exact"},{"name":"type III hypersensitivity reaction","type":"exact"}],"termid":"MONDO:0007004","xrefs":{"Monarch":{"xref_id":"0007004"}}}


id: PBO:0046260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embigin pseudogene 1","termid":"PBO:0046260"}


id: PBO:0063194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated transcript 7","termid":"PBO:0063194"}


id: PR:Q9UU76
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UU76"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio homology domain family member 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP1E11.11","synonyms":[{"name":"Spom972h-puf6","type":"exact"}],"termid":"PR:Q9UU76"}


id: GO:1904763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a chaperone-mediated autophagy translocation complex.","definition_xrefs":["GOC:TermGenie","GO_REF:0000079","GOC:pad","GOC:PARL","PMID:18644871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0030163"},{"rel_name":"part_of","termid":"GO:0006914"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085","GO:0030163","GO:0006914"],"is_obsolete":false,"name":"chaperone-mediated autophagy translocation complex assembly","synonyms":[{"name":"CMA receptor complex assembly","type":"related"},{"name":"CMA receptor complex formation","type":"related"},{"name":"CMA translocation complex assembly","type":"exact"},{"name":"CMA translocation complex formation","type":"exact"},{"name":"chaperone-mediated autophagy receptor complex assembly","type":"related"},{"name":"chaperone-mediated autophagy receptor complex formation","type":"related"},{"name":"chaperone-mediated autophagy translocation complex formation","type":"exact"}],"termid":"GO:1904763"}


id: PBO:0027008
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-irregular_ascospore_wall","termid":"PBO:0027008"}


id: PATO:0000769
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A coordination quality of inhering in a bearer by virtue of the bearer's having skillful and effective interaction of movement.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coordination","termid":"PATO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coordinated","termid":"PATO:0000769"}


id: GO:2001105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltoheptaoseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptasaccharide transport","termid":"GO:2001104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"maltoheptaose transport","termid":"GO:2001105"}


id: GO:0060695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of cholesterol transporter activity.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cholesterol transporter activity (obsolete GO:0060695)","termid":"GO:0060695"}


id: GO:0051197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving a coenzyme.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of coenzyme metabolic process (obsolete GO:0051197)","synonyms":[{"name":"activation of coenzyme metabolic process","type":"narrow"},{"name":"positive regulation of coenzyme and prosthetic group metabolic process","type":"broad"},{"name":"positive regulation of coenzyme and prosthetic group metabolism","type":"broad"},{"name":"positive regulation of coenzyme metabolism","type":"exact"},{"name":"stimulation of coenzyme metabolic process","type":"narrow"},{"name":"up regulation of coenzyme metabolic process","type":"exact"},{"name":"up-regulation of coenzyme metabolic process","type":"exact"},{"name":"upregulation of coenzyme metabolic process","type":"exact"}],"termid":"GO:0051197"}


id: GO:1904376
data:
  {"annotated_genes":["SJAG_02392","SJAG_03970","SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[96419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[97866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to cell periphery.","definition_xrefs":["PMID:18216290","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"negatively_regulates","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to cell periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localization to cell periphery","type":"exact"},{"name":"down-regulation of protein localization to cell periphery","type":"exact"},{"name":"downregulation of protein localization to cell periphery","type":"exact"},{"name":"inhibition of protein localization to cell periphery","type":"narrow"}],"termid":"GO:1904376","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: MONDO:0975756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"benign vascular tumor","termid":"MONDO:0971115"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reactive angioendotheliomatosis","secondary_identifiers":["MEDGEN:418935","Orphanet:673574","UMLS:C2930870"],"termid":"MONDO:0975756","xrefs":{"Monarch":{"xref_id":"0975756"}}}


id: GO:1905397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in an activated CD8-positive, alpha-beta T cell.","definition_xrefs":["GO_REF:0000085","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell apoptotic process","termid":"GO:0070231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"activated CD8-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"activated CD8-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"activated CD8-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905397"}


id: GO:0016413
data:
  {"annotated_genes":["SJAG_04305","SJAG_02654","SJAG_03305","SJAG_00395"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72504,72040],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016287"},{"annotations":[78292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004414"},{"annotations":[78100],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009001"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acetyl group to an oxygen atom on the acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"},{"relation_name":"is_a","term_name":"acetyltransferase activity","termid":"GO:0016407"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00395":null,"SJAG_02654":null,"SJAG_03305":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"O-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016413","terms_by_termid":{"GO:0004414":null,"GO:0009001":null,"GO:0016287":null}}


id: GO:0120081
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of microfilament motor activity.","definition_xrefs":["GOC:mah","PMID:20705471","PMID:8621557"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of microfilament motor activity (obsolete GO:0120081)","synonyms":[{"name":"activation of actin-activated ATPase activity","type":"narrow"},{"name":"activation of actin-dependent ATPase activity","type":"narrow"},{"name":"positive regulation of actin filament motor activity","type":"exact"},{"name":"positive regulation of actin-activated ATPase activity","type":"related"},{"name":"positive regulation of actin-dependent ATPase activity","type":"related"},{"name":"positive regulation of actin-filament motor activity","type":"exact"},{"name":"positive regulation of muscle motor activity","type":"narrow"},{"name":"positive regulation of myosin ATPase activity","type":"broad"},{"name":"upregulation of actin-dependent ATPase activity","type":"narrow"}],"termid":"GO:0120081"}


id: MONDO:0020493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Haddad syndrome is a rare congenital disorder in which congenital central hypoventilation syndrome (CCHS), or Ondine syndrome, occurs concurrently with Hirschsprung disease.","definition_xrefs":["Orphanet:99803"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal motility disease","termid":"MONDO:0021189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Haddad syndrome","secondary_identifiers":["UMLS:C1859049","MEDGEN:347052","ICD10CM:G47.3","GARD:16909","icd11.foundation:1685926536","SCTID:719972004"],"synonyms":[{"name":"Haddad syndrome","type":"exact"},{"name":"congenital central alveolar hypoventilation-Hirschsprung disease syndrome","type":"exact"},{"name":"ondine-Hirschsprung disease","type":"exact"},{"name":"ondine-Hirschsprung syndrome","type":"exact"}],"termid":"MONDO:0020493","xrefs":{"Monarch":{"xref_id":"0020493"}}}


id: FYPO:0005902
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actin filament-based movement is decreased. Actin filament-based movement is the movement of organelles or other particles along actin filaments, or sliding of actin filaments past each other, mediated by motor proteins.","definition_xrefs":["GO:0030048","PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin filament-based movement","termid":"FYPO:0005900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of actin filament-based movement","synonyms":[{"name":"decreased rate of actin filament-based movement during mitotic cell cycle","type":"related"},{"name":"decreased rate of actin filament-based movement during vegetative growth","type":"exact"},{"name":"reduced rate of actin filament-based movement","type":"exact"}],"termid":"FYPO:0005902"}


id: PR:000027506
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc25 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase inducer phosphatase","pombase_gene_id":"SPAC24H6.05","synonyms":[{"name":"CDC25","type":"related"},{"name":"MIH1","type":"related"},{"name":"Mitosis initiation protein","type":"exact"},{"name":"P80","type":"exact"},{"name":"cdc25","type":"exact"}],"termid":"PR:000027506"}


id: GO:0046232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carbazole, a heterocyclic aromatic compound containing a dibenzopyrrole system that is produced during coal gasification and is present in cigarette smoke. Coal tar produced at high temperature contains an average of 1.5% carbazole. It is used widely in synthesis of dyes, pharmaceuticals, and plastics and is a suspected carcinogen.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbazole catabolic process","synonyms":[{"name":"carbazole breakdown","type":"exact"},{"name":"carbazole catabolism","type":"exact"},{"name":"carbazole degradation","type":"exact"}],"termid":"GO:0046232"}


id: PATO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001157 absolute concentration value (obsolete PATO:0001157)","termid":"PATO:0001157"}


id: GO:0047466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-2-chloro-4-carboxymethylenebut-2-en-1,4-olide = trans-2-chloro-4-carboxymethylenebut-2-en-1,4-olide.","definition_xrefs":["RHEA:10924","EC:5.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-trans isomerase activity","termid":"GO:0016859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"2-chloro-4-carboxymethylenebut-2-en-1,4-olide isomerase activity","secondary_identifiers":["GO:0018840","KEGG_REACTION:R04576","UM-BBD_reactionID:r0278","MetaCyc:5.2.1.10-RXN"],"synonyms":[{"name":"2-chloro-4-carboxymethylenebut-2-en-1,4-olide cis-trans-isomerase activity","type":"related"},{"name":"2-chlorocarboxymethylenebutenolide isomerase activity","type":"related"},{"name":"chlorodienelactone isomerase activity","type":"related"}],"termid":"GO:0047466"}


id: PBO:0077188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 12, pseudogene","termid":"PBO:0077188"}


id: GO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein translocon complex at the chloroplast outer membrane.","definition_xrefs":["PMID:10646606"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"chloroplast outer membrane","termid":"GO:0009707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Toc complex","termid":"GO:0010006"}


id: GO:1904875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","GOC:BHF_telomere","GOC:rl","PMID:17389648","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA ligase activity (obsolete GO:1904875)","termid":"GO:1904875"}


id: GO:0003258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the differentiation of an endocardial precursor cell.","definition_xrefs":["GOC:mtg_heart"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in endocardial precursor cell differentiation (obsolete GO:0003258)","termid":"GO:0003258"}


id: MONDO:0021568
data:
  {"annotated_genes":["SJAG_02977","SJAG_01183","SJAG_03375","SJAG_03371","SJAG_01896","SJAG_04978","SJAG_01370","SJAG_00516","SJAG_04260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[89049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[88906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[87571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[88655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013163"},{"annotations":[89233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010645"},{"annotations":[86972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"},{"annotations":[87409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"},{"annotations":[88119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"},{"annotations":[88808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"A disease that involves the renal tubule.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00516":null,"SJAG_01183":null,"SJAG_01370":null,"SJAG_01896":null,"SJAG_02977":null,"SJAG_03371":null,"SJAG_03375":null,"SJAG_04260":null,"SJAG_04978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal tubule disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0151747","EFO:0009566","ICD9:588.89","SCTID:95568003","MEDGEN:57484"],"synonyms":[{"name":"disease of renal tubule","type":"exact"},{"name":"disease or disorder of renal tubule","type":"exact"},{"name":"disorder of renal tubule","type":"exact"},{"name":"renal tubular disease","type":"exact"},{"name":"renal tubular disorder","type":"exact"},{"name":"renal tubule disease","type":"exact"},{"name":"renal tubule disease or disorder","type":"exact"}],"termid":"MONDO:0021568","terms_by_termid":{"MONDO:0010359":null,"MONDO:0010645":null,"MONDO:0011268":null,"MONDO:0011301":null,"MONDO:0011422":null,"MONDO:0013163":null,"MONDO:0013458":null,"MONDO:0044726":null,"MONDO:0054565":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0021568"}}}


id: PBO:0078549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM39-RPP21 readthrough","termid":"PBO:0078549"}


id: PBO:0006379
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"confirmed intron","termid":"PBO:0006379"}


id: GO:0019334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of p-cymene, 1-methyl-4-isopropylbenzene, one of the alkyl-substituted aromatic hydrocarbons found in volatile oils from over 100 plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpene catabolic process","termid":"GO:0043694"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"p-cymene catabolic process","secondary_identifiers":["MetaCyc:PWY-741"],"synonyms":[{"name":"p-cymene breakdown","type":"exact"},{"name":"p-cymene catabolism","type":"exact"},{"name":"p-cymene degradation","type":"exact"}],"termid":"GO:0019334"}


id: PBO:0069066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 313, pseudogene","termid":"PBO:0069066"}


id: GO:0070369
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains beta-catenin and TCF7L2 (TCF4), binds to the TCF DNA motif within a promoter element, and is involved in the regulation of WNT target gene transcription.","definition_xrefs":["PMID:9065402","GOC:rl","PMID:9065401","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catenin-TCF7L2 complex","termid":"GO:0071664"},{"relation_name":"is_a","term_name":"beta-catenin-TCF complex","termid":"GO:1990907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"beta-catenin-TCF7L2 complex","synonyms":[{"name":"beta-catenin-TCF4 complex","type":"exact"}],"termid":"GO:0070369"}


id: GO:0051783
data:
  {"annotated_genes":["SJAG_04287","SJAG_02169","SJAG_01805","SJAG_02336","SJAG_04999","SJAG_03353","SJAG_01297","SJAG_04968","SJAG_04573","SJAG_02712","SJAG_03681","SJAG_04259","SJAG_02380","SJAG_01837","SJAG_01082","SJAG_04884","SJAG_01680","SJAG_00666","SJAG_04699","SJAG_03438","SJAG_03126","SJAG_02451","SJAG_02058","SJAG_03327","SJAG_00364","SJAG_04126","SJAG_01679","SJAG_02498","SJAG_03048","SJAG_00266","SJAG_00883","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[92730,105908,109264,101602,114016,115842,117961,116329,110292],"is_not":false,"rel_names":["negatively_regulates","regulates","is_a"],"summary":null,"term":"GO:1902426"},{"annotations":[108345,116556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[118119,108648,116319,91068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051598"},{"annotations":[117619,101444,103817,108347,111953,116559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[96208],"is_not":false,"rel_names":["regulates","is_a","negatively_regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[110009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[115847],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[118737],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[104397,113430,99708,102163,95816,104125,116825],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045842"},{"annotations":[91070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"},{"annotations":[103359],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:1905325"},{"annotations":[98948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0040020"},{"annotations":[112980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007088"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear division, the partitioning of the nucleus and its genetic information.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"nuclear division","termid":"GO:0000280"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00364":null,"SJAG_00666":null,"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01680":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_02058":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02380":null,"SJAG_02451":null,"SJAG_02498":null,"SJAG_02712":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_03327":null,"SJAG_03353":null,"SJAG_03438":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04287":null,"SJAG_04573":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of nuclear division","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051783","terms_by_termid":{"GO:0007088":null,"GO:0007094":null,"GO:0010845":null,"GO:0010846":null,"GO:0040020":null,"GO:0045128":null,"GO:0045842":null,"GO:0051598":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: GO:0045900
data:
  {"annotated_genes":["SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77308],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001125"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of translational elongation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"is_a","term_name":"negative regulation of translation","termid":"GO:0017148"},{"relation_name":"negatively_regulates","term_name":"translational elongation","termid":"GO:0006414"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of translational elongation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of translational elongation","type":"exact"},{"name":"down-regulation of translational elongation","type":"exact"},{"name":"downregulation of translational elongation","type":"exact"},{"name":"inhibition of translational elongation","type":"narrow"}],"termid":"GO:0045900","terms_by_termid":{"GO:2001125":null}}


id: MONDO:0018440
data:
  {"annotated_genes":["SJAG_00136","SJAG_00516"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009968"},{"annotations":[88119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"}]},"cv_name":"mondo","definition":"Autosomal recessive distal renal tubular acidosis (AR dRTA) is an inherited form of distal renal tubular acidosis (dRTA) characterized by hypokalemic hyperchloremic metabolic acidosis. Deafness often occurs either early or later on in life but may be absent or never be diagnosed.","definition_xrefs":["Orphanet:402041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"distal renal tubular acidosis","termid":"MONDO:0015827"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"autosomal recessive distal renal tubular acidosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:4666","MEDGEN:351142","UMLS:C1864498"],"synonyms":[{"name":"AR dRTA","type":"exact"},{"name":"autosomal recessive distal RTA","type":"exact"},{"name":"autosomal recessive distal renal tubular acidosis (disease)","type":"exact"},{"name":"distal renal tubular acidosis (disease), autosomal recessive","type":"exact"}],"termid":"MONDO:0018440","terms_by_termid":{"MONDO:0009968":null,"MONDO:0011268":null},"xrefs":{"Monarch":{"xref_id":"0018440"}}}


id: MONDO:0010717
data:
  {"annotated_genes":["SJAG_02006"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88421],"is_not":false,"summary":null,"term":"MONDO:0010717"}]},"cv_name":"mondo","definition":"Pyruvate dehydrogenase E1-alpha deficiency is the most frequent form of pyruvate dehydrogenase deficiency (PDHD) characterized by variable lactic acidosis, impaired psychomotor development, hypotonia and neurological dysfunction.","definition_xrefs":["Orphanet:79243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate dehydrogenase deficiency","termid":"MONDO:0019169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0005244","MONDO:0004069"],"is_obsolete":false,"name":"pyruvate dehydrogenase E1-alpha deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1839413","OMIM:312170","GARD:4620","ICD9:277.6","MEDGEN:326486","MESH:C564071","SCTID:124593001"],"synonyms":[{"name":"PDH deficiency","type":"related"},{"name":"PDHAD","type":"exact"},{"name":"ataxia with lactic acidosis 1","type":"related"},{"name":"ataxia, intermittent, with abnormal pyruvate metabolism","type":"related"},{"name":"ataxia, intermittent, with pyruvate dehydrogenase deficiency","type":"related"},{"name":"ataxia, intermittent, with pyruvate dehydrogenase, or decarboxylase, deficiency","type":"related"},{"name":"lactic acidemia, thiamine-responsive","type":"related"},{"name":"pyruvate decarboxylase deficiency","type":"broad"},{"name":"pyruvate dehydrogenase Complex deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-ALPHA deficiency","type":"related"},{"name":"pyruvate dehydrogenase E1-alpha deficiency","type":"exact"},{"name":"pyruvate dehydrogenase complex E1 component subunit alpha deficiency","type":"exact"},{"name":"pyruvate dehydrogenase e1-alpha deficiency, X-linked dominant","type":"exact"}],"termid":"MONDO:0010717","terms_by_termid":{"MONDO:0010717":null},"xrefs":{"Monarch":{"xref_id":"0010717"}}}


id: MONDO:0005762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with viruses of the family filoviridae. The infections in humans consist of a variety of clinically similar viral hemorrhagic fevers but the natural reservoir host is unknown.","definition_xrefs":["MESH:D018702"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mononegavirales infectious disease","termid":"MONDO:0005856"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Filoviridae infectious disease","secondary_identifiers":["UMLS:C0242917","MEDGEN:67006"],"synonyms":[{"name":"Filoviridae caused disease or disorder","type":"exact"},{"name":"Filoviridae disease or disorder","type":"exact"}],"termid":"MONDO:0005762","xrefs":{"Monarch":{"xref_id":"0005762"}}}


id: FYPO:0000223
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is longer, and has a greater length:diameter ratio, than normal, and has more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"multiseptate vegetative cell","termid":"FYPO:0000118"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000005","FYPO:0005447"],"is_obsolete":false,"name":"elongated multiseptate vegetative cell","synonyms":[{"name":"elongated multiseptate cell during mitotic cell cycle","type":"related"},{"name":"elongated multiseptate cells during vegetative growth","type":"exact"},{"name":"long multiseptate cells","type":"exact"}],"termid":"FYPO:0000223"}


id: MONDO:1012107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperkinesis, non-human animal","termid":"MONDO:1011626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperkinesis, dog","secondary_identifiers":["OMIA:000503-9615"],"termid":"MONDO:1012107","xrefs":{"Monarch":{"xref_id":"1012107"}}}


id: PBO:0004228
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.27.9","termid":"PBO:0004228"}


id: PBO:0057819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3139","termid":"PBO:0057819"}


id: MONDO:0006174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma of the adrenal cortex that produces cortisol. It may be associated with Cushing syndrome. Clinical presentation includes weight gain, round face, easy bruising, muscle weakness, emotional changes, hirsutism, and hypertension.","definition_xrefs":["NCIT:C48449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal cortex adenoma","termid":"MONDO:0003924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortisol-producing adrenal cortex adenoma","secondary_identifiers":["MEDGEN:353568","UMLS:C1707525","EFO:1000208"],"synonyms":[{"name":"cortisol producing adrenal cortex adenoma","type":"exact"},{"name":"cortisol producing adrenal cortical adenoma","type":"exact"},{"name":"cortisol-producing adrenal cortex adenoma","type":"exact"}],"termid":"MONDO:0006174","xrefs":{"Monarch":{"xref_id":"0006174"}}}


id: MONDO:0018059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute bacterial disease caused by Neisseria meningitides that presents usually, but not always, with a rash (non blanching petechial or purpuric rash), progressively developing signs of meningitis (fever, vomiting, headache, photophobia, and neck stiffness) and later leading to confusion, delirium and drowsiness. Neck stiffness and photophobia are often absent in infants and young children who may manifest nonspecific signs such as irritability, inconsolable crying, poor feeding, and a bulging fontanel. Meningococcal meningitis may also present as part of early or late onset sepsis in neonates. The disease is potentially fatal. Surviving patients may develop neurological sequelae that include sensorineural hearing loss, seizures, spasticity, attention deficits and intellectual disability.","definition_xrefs":["Orphanet:33475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningococcal infection","termid":"MONDO:0005373"},{"relation_name":"is_a","term_name":"bacterial meningitis","termid":"MONDO:0006670"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningococcal meningitis","secondary_identifiers":["ICD10CM:A39.0","MESH:D008585","NORD:1438","UMLS:C0025294","EFO:1001040","icd11.foundation:516585689","DOID:0080176","MEDGEN:6299","ICD9:036.0","MedDRA:10027249","GARD:18809","ICD10EXP:G01*","SCTID:192644005","ICD10EXP:A39.0+","MedDRA:10027276"],"termid":"MONDO:0018059","xrefs":{"Monarch":{"xref_id":"0018059"}}}


id: SO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A single stranded oligo used for polymerase chain reaction.","direct_ancestors":[{"relation_name":"has_quality","term_name":"forward","termid":"SO:0001030"},{"relation_name":"is_a","term_name":"primer","termid":"SO:0000112"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forward_primer","synonyms":[{"name":"DNA forward primer","type":"exact"},{"name":"forward DNA primer","type":"exact"},{"name":"forward primer","type":"exact"},{"name":"forward primer oligo","type":"exact"},{"name":"forward primer oligonucleotide","type":"exact"},{"name":"forward primer polynucleotide","type":"exact"},{"name":"forward primer sequence","type":"exact"}],"termid":"SO:0000121"}


id: PBO:0072865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAM and SH3 domain containing 3","termid":"PBO:0072865"}


id: PBO:0088552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gpl1-Gih35-Wdr83 complex WD repeat subunit Wdr83","termid":"PBO:0088552"}


id: GO:0001506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of neurotransmitters and the storage of the synthesized molecules.","definition_xrefs":["GOC:go_curators","ISBN:0123668387"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter biosynthetic process and storage (obsolete GO:0001506)","synonyms":[{"name":"neurotransmitter anabolism and storage","type":"exact"},{"name":"neurotransmitter biosynthetic process and storage","type":"exact"},{"name":"neurotransmitter formation and storage","type":"exact"},{"name":"neurotransmitter synthesis and storage","type":"exact"}],"termid":"GO:0001506"}


id: PBO:0039045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 5","termid":"PBO:0039045"}


id: PBO:0062140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 7 pseudogene","termid":"PBO:0062140"}


id: PBO:0049835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high density lipoprotein binding protein","termid":"PBO:0049835"}


id: GO:0106059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cytidine56 in tRNA= S-adenosyl-L-homocysteine + 2'-O-methylcytidine56 in tRNA.","definition_xrefs":["RHEA:42968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0140098","GO:0140101","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tRNA (cytidine(56)-2'-O)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.206","MetaCyc:RXN-11869"],"synonyms":[{"name":"tRNA (cytidine 56-2'-O)-methyltransferase activity","type":"exact"}],"termid":"GO:0106059"}


id: FYPO:0007200
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches cluster together more than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:30201262"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aggregated actin cortical patches during vegetative growth","termid":"FYPO:0005430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0004803","FYPO:0001320"],"is_obsolete":false,"name":"aggregated actin cortical patches during mitotic interphase","synonyms":[{"name":"actin cortical patch aggregation during mitotic interphase during vegetative growth","type":"related"},{"name":"aggregated F-actin patches during mitotic interphase","type":"exact"},{"name":"aggregated actin cortical patch distribution during mitotic interphase","type":"exact"},{"name":"aggregated actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"aggregated actin cortical patch localization during mitotic interphase","type":"exact"},{"name":"aggregated actin cortical patches during interphase of mitotic cell cycle","type":"exact"},{"name":"aggregated actin patches during mitotic interphase","type":"exact"}],"termid":"FYPO:0007200"}


id: PBO:0058752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6876","termid":"PBO:0058752"}


id: GO:0070268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of programmed cell death that occurs in the epidermis, morphologically and biochemically distinct from apoptosis. It leads to the formation of corneocytes, i.e. dead keratinocytes containing an amalgam of specific proteins (e.g., keratin, loricrin, SPR and involucrin) and lipids (e.g., fatty acids and ceramides), which are necessary for the function of the cornified skin layer (mechanical resistance, elasticity, water repellence and structural stability).","definition_xrefs":["PMID:18846107","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"keratinization","termid":"GO:0031424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cornification","secondary_identifiers":["Reactome:R-HSA-6809371"],"termid":"GO:0070268"}


id: MONDO:0012432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CEP290 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with oculorenal defect","termid":"MONDO:0009480"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"},{"relation_name":"is_a","term_name":"CEP290-related ciliopathy","termid":"MONDO:0100451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Joubert syndrome 5","secondary_identifiers":["MEDGEN:347545","MESH:C537688","UMLS:C1857780","OMIM:610188","DOID:0111000","GARD:15475"],"synonyms":[{"name":"CEP290 Joubert syndrome","type":"exact"},{"name":"JBTS5","type":"exact"},{"name":"Joubert syndrome 5","type":"exact"},{"name":"Joubert syndrome caused by mutation in CEP290","type":"exact"},{"name":"Joubert syndrome type 5","type":"exact"}],"termid":"MONDO:0012432","xrefs":{"Monarch":{"xref_id":"0012432"}}}


id: MONDO:0018785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A self-limiting, rapidly growing, non-encapsulated benign neoplasm that arises from the soft tissues. It is characterized by the presence of plump spindle-shaped fibroblasts, multinucleated osteoclast-like giant cells, chronic inflammatory infiltrate, red blood cell extravasation, and high mitotic activity.","definition_xrefs":["NCIT:C3827"],"gene_count":0,"genotype_count":0,"name":"obsolete nodular fasciitis (obsolete MONDO:0018785)","termid":"MONDO:0018785","xrefs":{"Monarch":{"xref_id":"0018785"}}}


id: PBO:0038413
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-causal_relation_between_entities","termid":"PBO:0038413"}


id: GO:0042722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of alpha-beta T cells resulting from exposure to a superantigen, a microbial antigen with an extremely potent activating effect on T cells that bear a specific variable region.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-beta T cell activation","termid":"GO:0046631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alpha-beta T cell activation by superantigen","synonyms":[{"name":"alpha-beta T lymphocyte activation by superantigen","type":"exact"},{"name":"alpha-beta T-cell activation by superantigen","type":"exact"},{"name":"alpha-beta T-lymphocyte activation by superantigen","type":"exact"}],"termid":"GO:0042722"}


id: PBO:0081320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 106","termid":"PBO:0081320"}


id: PBO:0081769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 701","termid":"PBO:0081769"}


id: MONDO:1012461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiosarcoma, horse","secondary_identifiers":["OMIA:001813-9796"],"termid":"MONDO:1012461","xrefs":{"Monarch":{"xref_id":"1012461"}}}


id: PBO:0001618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Sds22","termid":"PBO:0001618"}


id: PBO:0114849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and nucleatr DNA polymerase zeta subunit Rev7","termid":"PBO:0114849"}


id: GO:0035423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that terminates the activity of the active enzyme MAP kinase in the context of an innate immune response, a defense response mediated by germline encoded components that directly recognize components of potential pathogens.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK activity involved in innate immune response (obsolete GO:0035423)","termid":"GO:0035423"}


id: PBO:0062115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 14 pseudogene","termid":"PBO:0062115"}


id: PBO:0031625
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_ascospore_wall_assembly","termid":"PBO:0031625"}


id: MONDO:0005666
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete berylliosis (obsolete MONDO:0005666)","termid":"MONDO:0005666","xrefs":{"Monarch":{"xref_id":"0005666"}}}


id: GO:1902235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway.","definition_xrefs":["PMID:20160352","GOC:BHF","GOC:rl","GOC:mtg_apoptosis","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","termid":"GO:0070059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of endoplasmic reticulum stress-induced intrinsic apoptotic signaling pathway","synonyms":[{"name":"regulation of ER stress-induced apoptosis","type":"exact"},{"name":"regulation of apoptosis in response to ER stress","type":"exact"},{"name":"regulation of apoptosis in response to endoplasmic reticulum stress","type":"broad"},{"name":"regulation of apoptosis triggered by ER stress","type":"exact"},{"name":"regulation of endoplasmic reticulum stress-induced apoptosis","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway in response to endoplasmic reticulum stress","type":"exact"},{"name":"regulation of intrinsic apoptotic signaling pathway induced by endoplasmic reticulum stress","type":"exact"}],"termid":"GO:1902235"}


id: MONDO:0017035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary interstitial lung disease in childhood and adulthood associated with a systemic disease (obsolete MONDO:0017035)","secondary_identifiers":["Orphanet:264949"],"synonyms":[{"name":"secondary ILD in childhood and adulthood associated with a systemic disease","type":"exact"}],"termid":"MONDO:0017035","xrefs":{"Monarch":{"xref_id":"0017035"}}}


id: SO:0001927
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-coding transcript derived from the transcript of the telomere.","definition_xrefs":["PMID:22139915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomeric_transcript","synonyms":[{"name":"telomeric transcript","type":"exact"}],"termid":"SO:0001927"}


id: MONDO:0012282
data:
  {"annotated_genes":["SJAG_00183"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87024],"is_not":false,"summary":null,"term":"MONDO:0012282"}]},"cv_name":"mondo","definition":"An autosomal recessive syndrome characterized by joint contractures, skeletal abnormalities, anterior segment anomalies of the eye and early lethality.","definition_xrefs":["PMID:10319196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"B3GALT6-congenital disorder of glycosylation","termid":"MONDO:0100586"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"Al-Gazali syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C536817","OMIM:609465","MEDGEN:373020","Orphanet:2725","UMLS:C1836121","GARD:10054"],"synonyms":[{"name":"Al Gazali Al Talabani syndrome","type":"related"},{"name":"Al Gazali syndrome","type":"related"},{"name":"Al-Gazali syndrome","type":"exact"},{"name":"eye defects arachnodactyly cardiopathy","type":"related"}],"termid":"MONDO:0012282","terms_by_termid":{"MONDO:0012282":null},"xrefs":{"Monarch":{"xref_id":"0012282"}}}


id: PBO:0086861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative SCF ubiquitin ligase F-box protein; interacts physically with both Cdc53p and Skp1 and genetically with CDC34; similar to putative F-box protein YDR131C","termid":"PBO:0086861"}


id: MONDO:0004146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I meningioma characterized by the coexistence of meningothelial cells and fibrous architectural patterns.","definition_xrefs":["NCIT:C4333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transitional meningioma","secondary_identifiers":["MEDGEN:83174","ICDO:9537/0","UMLS:C0334611","DOID:7213"],"synonyms":[{"name":"mixed meningioma","type":"exact"},{"name":"transitional (mixed) meningioma","type":"exact"},{"name":"transitional meningioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0004146","xrefs":{"Monarch":{"xref_id":"0004146"}}}


id: GO:0015645
data:
  {"annotated_genes":["SJAG_00947","SJAG_03909","SJAG_03471"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031956"},{"annotations":[115482,107622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090432"},{"annotations":[107623],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090434"},{"annotations":[107624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090433"}]},"cv_name":"molecular_function","definition":"Catalysis of the ligation of a fatty acid to an acceptor, coupled to the hydrolysis of ATP.","definition_xrefs":["GOC:cjk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"},{"relation_name":"is_a","term_name":"ATP-dependent activity","termid":"GO:0140657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00947":null,"SJAG_03471":null,"SJAG_03909":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fatty acid ligase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"fatty acid CoA ligase activity","type":"related"},{"name":"fatty acyl-coenzyme A synthetase activity","type":"related"},{"name":"fatty-acid ligase activity","type":"exact"}],"termid":"GO:0015645","terms_by_termid":{"GO:0031956":null,"GO:0090432":null,"GO:0090433":null,"GO:0090434":null}}


id: PBO:0043665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q8B","termid":"PBO:0043665"}


id: PBO:0056762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase like 15 pseudogene 1","termid":"PBO:0056762"}


id: PBO:0077538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 250","termid":"PBO:0077538"}


id: PBO:0050092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 1","termid":"PBO:0050092"}


id: FYECO:0000244
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which 3MB-PP1 was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ 3MB-PP1","termid":"FYECO:0000244"}


id: PBO:0064355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase M20 domain containing 2","termid":"PBO:0064355"}


id: PBO:0041896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caveolae associated protein 2","termid":"PBO:0041896"}


id: MONDO:0015977
data:
  {"annotated_genes":["SJAG_02330","SJAG_02208","SJAG_00222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030519"},{"annotations":[88080,88079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958013"}]},"cv_name":"mondo","definition":"A decreased level of serum immunoglobulins. It may be inherited or acquired. It is caused by decreased or inefficient production of immunoglobulins from B cells or by a decrease in the numbers of B cells themselves. Low levels of immunoglobulins will affect the immune system's ability to combat bacterial infection. Supplementation of immunoglobulins is needed to prevent worsening outcomes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell deficiency","termid":"MONDO:0002211"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00222":null,"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"agammaglobulinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:20320","MESH:D000361","OMIMPS:601495","Orphanet:183669","DOID:2583","MEDGEN:168","ICD9:279.00","MedDRA:10001471","UMLS:C0001768"],"synonyms":[{"name":"Gammaglobulin Deficiency","type":"related"},{"name":"IGHM","type":"exact"},{"name":"Immunoglobulin Deficiency","type":"related"},{"name":"agammaglobulinemia","type":"exact"},{"name":"antibody Deficiency","type":"related"},{"name":"hypogammaglobulinemia","type":"exact"},{"name":"mu heavy chain deficiency","type":"exact"}],"termid":"MONDO:0015977","terms_by_termid":{"MONDO:0030519":null,"MONDO:0958013":null},"xrefs":{"Monarch":{"xref_id":"0015977"}}}


id: PBO:0061564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5' nucleotidase, ecto-like, pseudogene","termid":"PBO:0061564"}


id: FYPO:0005561
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which stable microtubule bundles are longer than normal. Stable microtubule bundles, also called Q-MT bundles, are found in quiescent cells.","definition_xrefs":["PomBase:mah","PMID:26124291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal microtubule bundle","termid":"FYPO:0005558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0001320"],"is_obsolete":false,"name":"long stable microtubule bundle","synonyms":[{"name":"elongated stable microtubule bundle","type":"exact"},{"name":"increased stable microtubule bundle length","type":"exact"},{"name":"long Q-MT bundles","type":"exact"},{"name":"long quiescent cell MT bundle","type":"exact"},{"name":"long quiescent cell microtubule bundle","type":"exact"},{"name":"long stable microtubule array","type":"related"},{"name":"long static microtubule bundle","type":"exact"}],"termid":"FYPO:0005561"}


id: PR:Q9Y7J0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH pyrophosphatase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.03c","synonyms":[{"name":"Spom972h-SPBC1778.03c","type":"exact"}],"termid":"PR:Q9Y7J0"}


id: MONDO:0009671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intellectual disability-myopathy-short stature-endocrine defect syndrome is a rare congenital myopathy syndrome characterized by nonprogressive myopathy (manifesting with mild facial and generalized weakness, bilateral ptosis, and severe lumbar lordosis), severe intellectual disability, short stature, and sexual infantilism (due to hypogonadotropic hypogonadism). The presence of a small pituitary fossa was also noted. There have been no further descriptions in the literature since 1985.","definition_xrefs":["Orphanet:3068"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital myopathy","termid":"MONDO:0019952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"intellectual disability-myopathy-short stature-endocrine defect syndrome","secondary_identifiers":["UMLS:C1854663","OMIM:253320","SCTID:764959000","MEDGEN:381471","GARD:1358","MESH:C535458"],"synonyms":[{"name":"Chudley Rozdilsky syndrome","type":"related"},{"name":"Chudley syndrome","type":"related"},{"name":"Chudley-Rozdilsky syndrome","type":"exact"},{"name":"multicore myopathy with intellectual disability, short stature, and hypogonadotropic hypogonadism","type":"related"},{"name":"multicore myopathy with mental retardation, short stature, and hypogonadotropic hypogonadism","type":"related"}],"termid":"MONDO:0009671","xrefs":{"Monarch":{"xref_id":"0009671"}}}


id: PR:P22774-2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:P22774-2.","definition_xrefs":["PRO:DNx","UniProtKB:P22774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heat shock 70 kDa protein, mitochondrial (Schizosaccharomyces pombe 972h-)","termid":"PR:P22774"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock 70 kDa protein, mitochondrial isoform Short (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:P22774-2"],"synonyms":[{"name":"Spom972h-HSPA9/iso:Short","type":"exact"}],"termid":"PR:P22774-2"}


id: GO:0022832
data:
  {"annotated_genes":["SJAG_05229","SJAG_00048"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008331"},{"annotations":[73638],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008308"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel whose open state is dependent on the voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00048":null,"SJAG_05229":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"voltage-gated channel activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0022832","terms_by_termid":{"GO:0008308":null,"GO:0008331":null}}


id: PBO:0031435
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation","termid":"PBO:0031435"}


id: PBO:0069410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 670, pseudogene","termid":"PBO:0069410"}


id: GO:1903121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of TRAIL-activated apoptotic signaling pathway.","definition_xrefs":["GO_REF:0000058","GOC:bf","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extrinsic apoptotic signaling pathway via death domain receptors","termid":"GO:1902041"},{"relation_name":"regulates","term_name":"TRAIL-activated apoptotic signaling pathway","termid":"GO:0036462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of TRAIL-activated apoptotic signaling pathway","synonyms":[{"name":"regulation of TRAIL-activated extrinsic apoptotic signaling pathway","type":"exact"},{"name":"regulation of TRAIL-induced apoptotic signaling pathway","type":"exact"},{"name":"regulation of tumor necrosis factor-related apoptosis-inducing ligand apoptotic signaling pathway","type":"exact"}],"termid":"GO:1903121"}


id: PBO:0059902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 25","termid":"PBO:0059902"}


id: MONDO:0001036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of pus in the anterior chamber of the eye.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious anterior uveitis","termid":"MONDO:0017210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"hypopyon","secondary_identifiers":["ICD10CM:H20.05","icd11.foundation:803985395","MEDGEN:43802","ICD9:364.05","NCIT:C50593","SCTID:87807004","UMLS:C0020641","DOID:10443"],"termid":"MONDO:0001036","xrefs":{"Monarch":{"xref_id":"0001036"}}}


id: PBO:0027554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_chromatin_binding_during_recovery_from_nitrogen_starvation","termid":"PBO:0027554"}


id: PBO:0034349
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-derived_by_descent_from","termid":"PBO:0034349"}


id: GO:0046685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an arsenic stimulus from compounds containing arsenic, including arsenates, arsenites, and arsenides.","definition_xrefs":["GOC:hjd","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to arsenic-containing substance","synonyms":[{"name":"arsenate sensitivity/resistance","type":"related"},{"name":"response to arsenic","type":"exact"}],"termid":"GO:0046685"}


id: MONDO:0032903
data:
  {"annotated_genes":["SJAG_00875"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88680],"is_not":false,"summary":null,"term":"MONDO:0032903"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00875":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita 4, neurogenic, with agenesis of the corpus callosum","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080980","OMIM:618766","UMLS:C5231494","MEDGEN:1684706"],"synonyms":[{"name":"AMCNACC","type":"exact"},{"name":"Zain Syndrome","type":"related"},{"name":"arthrogryposis multiplex congenita, neurogenic, with agenesis of the corpus callosum","type":"exact"}],"termid":"MONDO:0032903","terms_by_termid":{"MONDO:0032903":null},"xrefs":{"Monarch":{"xref_id":"0032903"}}}


id: PBO:0000366
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses fip1","termid":"PBO:0000366"}


id: GO:0052111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an organism effects a change that impairs the structure or function of an anatomical structure of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disruption of anatomical structure in another organism","termid":"GO:0141060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated disruption of host anatomical structure","synonyms":[{"name":"cytopathogenic effect","type":"related"},{"name":"disruption by symbiont of host anatomical structure","type":"exact"},{"name":"modification by symbiont of host anatomical structure","type":"exact"},{"name":"modification by symbiont of host structure","type":"related"}],"termid":"GO:0052111"}


id: PBO:0044454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 33, pseudogene","termid":"PBO:0044454"}


id: PBO:0085219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Palmitoyltransferase that acts on transmembrane proteins; including the SNAREs Snc1p, Syn8p, Tlg1p and likely all SNAREs; contains an Asp-His-His-Cys-cysteine rich (DHHC-CRD) domain; may have a role in vacuole fusion","termid":"PBO:0085219"}


id: GO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol hexakisphosphate + ATP = 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate + ADP.","definition_xrefs":["RHEA:12793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol hexakisphosphate kinase activity","termid":"GO:0000828"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"inositol hexakisphosphate 5-kinase activity","secondary_identifiers":["MetaCyc:2.7.1.152-RXN","KEGG_REACTION:R09087"],"synonyms":[{"name":"ATP:1D-myo-inositol-hexakisphosphate 5-phosphotransferase activity","type":"exact"}],"termid":"GO:0000832"}


id: FYPO:0001593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of valine into the cell occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased amino acid import during vegetative growth","termid":"FYPO:0001360"},{"relation_name":"is_a","term_name":"abnormal valine import","termid":"FYPO:0001658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000138"],"is_obsolete":false,"name":"decreased valine import","synonyms":[{"name":"decreased L-valine import","type":"exact"},{"name":"decreased L-valine import across plasma membrane","type":"exact"},{"name":"decreased valine import during mitotic cell cycle","type":"related"},{"name":"decreased valine import during vegetative growth","type":"exact"},{"name":"decreased valine import into cell","type":"exact"},{"name":"decreased valine uptake","type":"exact"},{"name":"reduced valine import","type":"exact"}],"termid":"FYPO:0001593"}


id: MONDO:0018764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microcephalic primordial dwarfism due to RTTN deficiency is a rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by primary microcephaly, profound short stature, moderate to severe intellectual disability, global developmental delay, craniofacial dysmorphism (e.g. sloping forehead, high and broad nasal bridge) and variable brain malformations, including simplified gyration, pachygyria, polymicrogyria, reduced sulcation, dysgenesis of corpus callosum and deformed ventricles. Renal anomalies, bilateral hearing loss, multiple joint contractures, severe failure to thrive and a sacral lesion cephalad to the gluteal crease have also been reported.","definition_xrefs":["Orphanet:468631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephalic primordial dwarfism due to RTTN deficiency","secondary_identifiers":["UMLS:C3553831","OMIM:614833","GARD:17841","MEDGEN:766745"],"termid":"MONDO:0018764","xrefs":{"Monarch":{"xref_id":"0018764"}}}


id: GO:1901951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterograde dense core granule transport.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:23358451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"is_a","term_name":"regulation of dense core granule transport","termid":"GO:1904809"},{"relation_name":"regulates","term_name":"anterograde neuronal dense core vesicle transport","termid":"GO:1990048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of anterograde dense core granule transport","termid":"GO:1901951"}


id: PATO:0002252
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's being flattened along the antero-posterior axis.","definition_xrefs":["PATOC:JC"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flattened","termid":"PATO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antero-posteriorly flattened","synonyms":[{"name":"antero-posteriorly compressed","type":"exact"}],"termid":"PATO:0002252"}


id: PBO:0000076
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan","termid":"PBO:0000076"}


id: MONDO:0015549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic hematologic disease (obsolete MONDO:0015549)","secondary_identifiers":["Orphanet:158300"],"termid":"MONDO:0015549","xrefs":{"Monarch":{"xref_id":"0015549"}}}


id: MONDO:0002470
data:
  {"annotated_genes":["SJAG_00995","SJAG_03206","SJAG_01207"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011125"},{"annotations":[87272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014615"},{"annotations":[87273],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014619"}]},"cv_name":"mondo","definition":"A trichothiodystrophy that is photosensitive, and caused by defects in the NER pathway","definition_xrefs":["Wikipedia:Trichothiodystrophy#Photosensitive_forms"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"},{"relation_name":"is_a","term_name":"DNA repair disease","termid":"MONDO:0021190"},{"relation_name":"is_a","term_name":"radiation-induced disorder","termid":"MONDO:0043459"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00995":null,"SJAG_01207":null,"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0021190","MONDO:0005066"],"is_obsolete":false,"name":"photosensitive trichothiodystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:336339","UMLS:C1848412","DOID:2960","NCIT:C4924","Orphanet:453","NANDO:1200626"],"synonyms":[{"name":"IBIDS syndrome","type":"exact"},{"name":"Ichtyosis, brittle hair, intellectual impairment, decreased fertility, and short stature","type":"related"},{"name":"Tay syndrome","type":"exact"},{"name":"sulfur-deficient brittle hair syndrome","type":"exact"},{"name":"trichothiodystrophy","type":"broad"},{"name":"trichothiodystrophy with congenital ichthyosis","type":"broad"},{"name":"trichothiodystrophy with congenital ichtyosis","type":"related"}],"termid":"MONDO:0002470","terms_by_termid":{"MONDO:0011125":null,"MONDO:0014615":null,"MONDO:0014619":null},"xrefs":{"Monarch":{"xref_id":"0002470"}}}


id: GO:0010585
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled release of glutamine by a cell.","definition_xrefs":["PMID:15208395"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine transport","termid":"GO:0006868"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"glutamine secretion","termid":"GO:0010585"}


id: MONDO:0000081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ovarian dysgenesis (obsolete MONDO:0000081)","termid":"MONDO:0000081","xrefs":{"Monarch":{"xref_id":"0000081"}}}


id: PBO:0046784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EYA transcriptional coactivator and phosphatase 4","termid":"PBO:0046784"}


id: PBO:0000532
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitotic Catastrophe Suppressor","termid":"PBO:0000532"}


id: PBO:0081468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 341","termid":"PBO:0081468"}


id: GO:1990279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor MBF.","definition_xrefs":["PMID:24006488"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of MBF transcription factor activity (obsolete GO:1990279)","synonyms":[{"name":"negative regulation of MBF transcription factor activity","type":"exact"}],"termid":"GO:1990279"}


id: PBO:0030274
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nucleus_during_vegetative_growth","termid":"PBO:0030274"}


id: FYPO:0004382
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which a single kinetochore becomes attached to both spindle poles, and sister chromatids do not move towards the spindle poles at the same time during mitosis prior to completion of chromosome segregation.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"has_part","term_name":"lagging mitotic chromosomes","termid":"FYPO:0000228"},{"relation_name":"has_part","term_name":"merotelic kinetochore attachment during mitosis","termid":"FYPO:0004381"},{"relation_name":"is_a","term_name":"abnormal attachment of mitotic spindle microtubules to kinetochore","termid":"FYPO:0004213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000337","FYPO:0000641","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"meroterically attached lagging mitotic chromosomes","synonyms":[{"name":"abnormal mitotic sister chromatid segregation, with merotelic kinetochore attachment and lagging mitotic chromosomes","type":"exact"},{"name":"lagging mitotic chromosomes with merotelic kinetochore attachment","type":"exact"},{"name":"lagging mitotic sister chromatids, with merotelic kinetochore attachment","type":"exact"},{"name":"merotelic kinetochore attachment with lagging mitotic chromosomes","type":"exact"},{"name":"meroterically attached lagging mitotic chromosomes during mitotic cell cycle","type":"related"},{"name":"meroterically attached lagging mitotic chromosomes during vegetative growth","type":"exact"}],"termid":"FYPO:0004382"}


id: PR:O74443
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- laf2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74443"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWIRM domain-containing protein laf2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1682.13","synonyms":[{"name":"Spom972h-laf2","type":"exact"},{"name":"clr6 L-associated factor 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74443"}


id: GO:0106425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-dopa + O2 + H2O + H+ = 3,4-dihydroxyphenylacetaldehyde + CO2 + NH(4)+ + H2O2.","definition_xrefs":["PMID:21283636","RHEA:55524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"3,4-dihydroxyphenylacetaldehyde synthase activity","secondary_identifiers":["EC:4.1.1.107"],"synonyms":[{"name":"DHPAA synthase","type":"exact"}],"termid":"GO:0106425"}


id: PBO:0085304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85p cyclin of the Pho80p subfamily; forms the major Glc8p kinase together with Pcl7p and Pho85p; involved in the control of glycogen storage by Pho85p; stabilized by Elongin C binding; PCL6 has a paralog, PCL7, that arose from the whole genome duplication","termid":"PBO:0085304"}


id: PBO:0050408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C pseudogene 10","termid":"PBO:0050408"}


id: MONDO:0017295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile glycerol kinase deficiency (GKD) is an uncommon form of GKD characterized by Reye-like clinical manifestations including episodic vomiting, acidemia, and disorders of consciousness.","definition_xrefs":["Orphanet:284411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated glycerol kinase deficiency","termid":"MONDO:0018459"},{"relation_name":"is_a","term_name":"disorder of gluconeogenesis","termid":"MONDO:0019225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycerol kinase deficiency, juvenile form","secondary_identifiers":["UMLS:C5681029","MEDGEN:1842281","GARD:17316"],"termid":"MONDO:0017295","xrefs":{"Monarch":{"xref_id":"0017295"}}}


id: PBO:0061368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 28","termid":"PBO:0061368"}


id: GO:1900123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nodal receptor complex assembly.","definition_xrefs":["GOC:TermGenie","GOC:signaling","PMID:15062104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"nodal receptor complex assembly","termid":"GO:0038099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"regulation of nodal receptor complex assembly","synonyms":[{"name":"regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"regulation of nodal receptor complex formation","type":"exact"}],"termid":"GO:1900123"}


id: PBO:0028267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitochondrial_RNA_level","termid":"PBO:0028267"}


id: GO:0016929
data:
  {"annotated_genes":["SJAG_02214","SJAG_16454"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71931,92276],"is_not":false,"summary":null,"term":"GO:0016929"}]},"cv_name":"molecular_function","definition":"An thiol-dependent isopeptidase activity that cleaves SUMO from a target protein to which it is conjugated.","definition_xrefs":["GOC:rn","PMID:11031248","PMID:11265250","PMID:10094048","PMID:23746258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteine-type peptidase activity","termid":"GO:0008234"},{"relation_name":"is_a","term_name":"ubiquitin-like protein peptidase activity","termid":"GO:0019783"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02214":null,"SJAG_16454":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008233"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0003674","GO:0016787","GO:0008233"],"is_obsolete":false,"name":"deSUMOylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0070140"],"synonyms":[{"name":"SUMO-specific isopeptidase activity","type":"exact"},{"name":"SUMO-specific protease activity","type":"exact"},{"name":"SUSP","type":"narrow"},{"name":"ULP","type":"narrow"}],"termid":"GO:0016929","terms_by_termid":{"GO:0016929":null}}


id: FYPO:0007030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the levels and proportions of monosaccharides in the cell wall are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:30389790","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cell wall monosaccharide composition during vegetative growth","synonyms":[{"name":"normal cell wall monosaccharide composition during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007030"}


id: PBO:0054358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1751","termid":"PBO:0054358"}


id: PBO:0068115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 422","termid":"PBO:0068115"}


id: MONDO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cholesterol embolism that involves the kidney.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"cholesterol embolism","termid":"MONDO:0005568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"atheroembolism of kidney","secondary_identifiers":["ICD10CM:I75.81","DOID:1460","MEDGEN:541484","UMLS:C0268792"],"synonyms":[{"name":"cholesterol embolism of kidney","type":"exact"},{"name":"kidney cholesterol embolism","type":"exact"}],"termid":"MONDO:0002004","xrefs":{"Monarch":{"xref_id":"0002004"}}}


id: PBO:0057934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3660","termid":"PBO:0057934"}


id: PBO:0108897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 10","termid":"PBO:0108897"}


id: MONDO:0009448
data:
  {"annotated_genes":["SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88207],"is_not":false,"summary":null,"term":"MONDO:0009448"}]},"cv_name":"mondo","definition":"A metabolic disorder resulting from defective renal tube reabsorption of proline, hydroxyproline and glycine. The prevalence is estimated at around 1 in 15 000. The disorder is usually asymptomatic and is identified fortuitously by detection of increased levels of the imino acids and glycine in the urine. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:42062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"iminoglycinuria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:242600","GARD:8424","DOID:0112265","MEDGEN:124342","SCTID:84121007","MESH:C536285","ICD9:270.8","UMLS:C0268654","icd11.foundation:664428532"],"synonyms":[{"name":"iminoglycinuria","type":"exact"},{"name":"iminoglycinuria, digenic","type":"exact"}],"termid":"MONDO:0009448","terms_by_termid":{"MONDO:0009448":null},"xrefs":{"Monarch":{"xref_id":"0009448"}}}


id: PBO:0042196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin D1 binding protein 1","termid":"PBO:0042196"}


id: GO:1903392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of adherens junction organization.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:21724833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of adherens junction organization","termid":"GO:1903391"},{"relation_name":"negatively_regulates","term_name":"adherens junction organization","termid":"GO:0034332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of adherens junction organization","synonyms":[{"name":"down regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"down regulation of adherens junction organisation","type":"exact"},{"name":"down regulation of adherens junction organization","type":"exact"},{"name":"down-regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"down-regulation of adherens junction organisation","type":"exact"},{"name":"down-regulation of adherens junction organization","type":"exact"},{"name":"downregulation of adherens junction assembly and maintenance","type":"exact"},{"name":"downregulation of adherens junction organisation","type":"exact"},{"name":"downregulation of adherens junction organization","type":"exact"},{"name":"inhibition of adherens junction assembly and maintenance","type":"narrow"},{"name":"inhibition of adherens junction organisation","type":"narrow"},{"name":"inhibition of adherens junction organization","type":"narrow"},{"name":"negative regulation of adherens junction assembly and maintenance","type":"exact"},{"name":"negative regulation of adherens junction organisation","type":"exact"}],"termid":"GO:1903392"}


id: FYPO:0000674
data:
  {"alleles_by_uniquename":{"SJAG_01946:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01946","name":"cem1delta","uniquename":"SJAG_01946:allele-1"},"SJAG_03198:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03198","name":"oar2delta","uniquename":"SJAG_03198:allele-1"},"SJAG_03198:allele-2":{"allele_type":"amino_acid_mutation","description":"Y189D cold sensitive","gene_uniquename":"SJAG_03198","name":"oar2-51","uniquename":"SJAG_03198:allele-2"},"SJAG_03198:allele-3":{"allele_type":"amino_acid_mutation","description":"R72A,L75A,R106A,L109A","gene_uniquename":"SJAG_03198","name":"oar2-dm12","synonyms":[{"name":"destruction box mutations","reference":"PMID:23786411","type":"exact"}],"uniquename":"SJAG_03198:allele-3"},"SJAG_03575:allele-1":{"allele_type":"amino_acid_mutation","description":"E548K ts","gene_uniquename":"SJAG_03575","name":"apc2-361","uniquename":"SJAG_03575:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121717,121718,121719,121721],"is_not":false,"summary":null,"term":"FYPO:0000674"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) at a high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01946":null,"SJAG_03198":null,"SJAG_03575":null},"genotype_count":4,"genotypes_by_uniquename":{"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta":{"display_name":"apc2-361(E548K ts) cem1delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__cem1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01946:allele-1","expression":"Null"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"apc2-361(E548K ts) oar2-51(Y189D cold sensitive)","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-51-Y189D_cold_sensitive-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-2","expression":"Not assayed or wild type"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression":{"display_name":"apc2-361(E548K ts) oar2-dm12(R72A,L75A,R106A,L109A aa)[Overexpression]","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2-dm12-R72A,L75A,R106A,L109A-amino_acid_mutation-expression-overexpression","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-3","expression":"Overexpression"}]}]},"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta":{"display_name":"apc2-361(E548K ts) oar2delta","display_uniquename":"apc2-361-E548K_ts-amino_acid_mutation-expression-not_assayed_or_wild_type__oar2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03575:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03198:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03198","SJAG_01946","SJAG_03575"],"name":"normal cell population growth at high temperature","references_by_uniquename":{"PMID:23786411":null},"synonyms":[{"name":"heat sensitivity: normal","type":"related"},{"name":"normal growth at high temperature","type":"broad"},{"name":"normal vegetative cell population growth at high temperature","type":"exact"}],"termid":"FYPO:0000674","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0000674":null}}


id: GO:0060219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell in a camera-type eye.","definition_xrefs":["GOC:dph","GOC:ascb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"},{"relation_name":"part_of","term_name":"neural retina development","termid":"GO:0003407"},{"relation_name":"part_of","term_name":"retina morphogenesis in camera-type eye","termid":"GO:0060042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"camera-type eye photoreceptor cell differentiation","termid":"GO:0060219"}


id: MONDO:1010982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in golden hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, golden hamster","secondary_identifiers":["OMIA:000487-10036"],"termid":"MONDO:1010982","xrefs":{"Monarch":{"xref_id":"1010982"}}}


id: GO:0007004
data:
  {"annotated_genes":["SJAG_03685","SJAG_03855","SJAG_05979","SJAG_01378","SJAG_02194","SJAG_01677","SJAG_04266","SJAG_04586","SJAG_00939"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71594,72627,82165,82228,92646,110156,115884,118007],"is_not":false,"summary":null,"term":"GO:0007004"},{"annotations":[78999],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032210"}]},"cv_name":"biological_process","definition":"The maintenance of proper telomeric length by the addition of telomeric repeats by telomerase.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-templated DNA biosynthetic process","termid":"GO:0006278"},{"relation_name":"is_a","term_name":"telomere maintenance via telomere lengthening","termid":"GO:0010833"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00939":null,"SJAG_01378":null,"SJAG_01677":null,"SJAG_02194":null,"SJAG_03685":null,"SJAG_03855":null,"SJAG_04266":null,"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0032200","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"telomere maintenance via telomerase","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-171319"],"synonyms":[{"name":"telomerase-dependent telomere maintenance","type":"exact"}],"termid":"GO:0007004","terms_by_termid":{"GO:0007004":null,"GO:0032210":null}}


id: FYPO:0006121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which membrane raft distribution, i.e. the process that establishes the spatial arrangement of membrane rafts within a cellular membrane, is abnormal.","definition_xrefs":["PomBase:mah","GO:0031580","PMID:19808887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"abnormal membrane organization during vegetative growth","termid":"FYPO:0001351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abnormal membrane raft distribution","synonyms":[{"name":"abnormal lipid raft distribution","type":"exact"},{"name":"abnormal membrane raft distribution during mitotic cell cycle","type":"related"},{"name":"abnormal membrane raft distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0006121"}


id: FYPO:0006116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to actin cortical patch","termid":"FYPO:0000742"},{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to actin cortical patch","synonyms":[{"name":"abolished protein localisation to actin cortical patch","type":"exact"},{"name":"abolished protein localization to actin cortical patch during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actin cortical patch during vegetative growth","type":"exact"},{"name":"abolished protein localization to actin patch","type":"exact"},{"name":"protein localization to actin cortical patch abolished","type":"exact"}],"termid":"FYPO:0006116"}


id: MONDO:0004586
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rheumatoid lung disease is a group of lung problems related to rheumatoid arthritis.","definition_xrefs":["PMID:17684286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"rheumatoid lung disease","secondary_identifiers":["ICD9:714.81","MEDGEN:681135","UMLS:C0994344","DOID:849","SCTID:398726004"],"synonyms":[{"name":"rheumatoid lung","type":"exact"}],"termid":"MONDO:0004586","xrefs":{"Monarch":{"xref_id":"0004586"}}}


id: GO:0001149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a sequence of DNA that is a termination site for bacterial-type RNA polymerase in order to promote transcription termination by bacterial-type RNA polymerase.","definition_xrefs":["GOC:txnOH","PMID:18280161"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, bacterial-type RNA polymerase termination site sequence-specific binding (obsolete GO:0001149)","synonyms":[{"name":"bacterial-type RNA polymerase termination site sequence-specific DNA binding transcription factor activity","type":"exact"}],"termid":"GO:0001149"}


id: SO:0000600
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000600 edited_by_A_to_I_substitution (obsolete SO:0000600)","termid":"SO:0000600"}


id: MONDO:0011473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the LCA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"LCA5-related retinopathy","termid":"MONDO:0100445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 5","secondary_identifiers":["UMLS:C1858301","DOID:0110215","MEDGEN:388031","MESH:C536602","OMIM:604537","GARD:9983","ICD10CM:H35.5"],"synonyms":[{"name":"LCA5","type":"exact"},{"name":"LCA5 Leber congenital amaurosis","type":"exact"},{"name":"Leber congenital amaurosis 5","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in LCA5","type":"exact"},{"name":"Leber congenital amaurosis type 5","type":"exact"},{"name":"amaurosis congenita of Leber, type 5","type":"related"}],"termid":"MONDO:0011473","xrefs":{"Monarch":{"xref_id":"0011473"}}}


id: MOD:01795
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue containing common isotopes to 1x(13)C,3x(2)H C(6)-labeled L-methionine.","definition_xrefs":["PubMed:15782174","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(2)H deuterium labeled residue","termid":"MOD:00839"},{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"1x(13)C,3x(2)H labeled monomethylated residue","termid":"MOD:01794"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1x(13)C,3x(2)H C(6)-labeled L-methionine","synonyms":[{"name":"Methyl:2H(3)13C(1)","type":"related"}],"termid":"MOD:01795"}


id: GO:0160005
data:
  {"annotated_genes":["SJAG_03930","SJAG_05414"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93254,110437],"is_not":false,"summary":null,"term":"GO:0160005"}]},"cv_name":"cellular_component","definition":"A transmembrane protein complex located in the endoplasmic reticulum (ER) involved in the correct folding of multipass membrane proteins in the ER membrane. In human, the substrate-binding Asterix (PAT10, WDR83OS) forms an obligate heterodimer with CCDC47.","definition_xrefs":["PMID:33960686","PMID:32814900","PMID:33082068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03930":null,"SJAG_05414":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"part_of","termid":"GO:0005783"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005789","GO:0005575","GO:0005783"],"is_obsolete":false,"name":"PAT complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160005","terms_by_termid":{"GO:0160005":null}}


id: MONDO:0009763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypoventilation syndrome in very obese persons with excessive adipose tissue around the abdomen and diaphragm is characterized by diminished to absent ventilatory chemoresponsiveness; chronic hypoxia; hypercapnia; polycythemia; and long periods of sleep during day and night (hypersomnolence). It is a condition often related to obstructive sleep apnea but can occur separately.","definition_xrefs":["MESH:D010845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity-hypoventilation syndrome","secondary_identifiers":["SCTID:190966007","ICD9:786.09","MEDGEN:18472","UMLS:C0031880","OMIM:257500","EFO:1001382","NANDO:1200752"],"synonyms":[{"name":"Pickwickian syndrome","type":"related"},{"name":"obesity-hypoventilation syndrome","type":"exact"}],"termid":"MONDO:0009763","xrefs":{"Monarch":{"xref_id":"0009763"}}}


id: PBO:0047710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 1","termid":"PBO:0047710"}


id: PBO:0067518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 659, pseudogene","termid":"PBO:0067518"}


id: PBO:0073810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC6A14 pseudogene 1","termid":"PBO:0073810"}


id: MOD:00497
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod [(35)S]dithiobis(succinimidyl propionate) crosslinking","definition_xrefs":["Unimod:126","PubMed:957432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-sulfanylpropanoyl (N-term and Lys)","synonyms":[{"name":"3,3-Dithio-bis-(sulfosuccinimidyl)propionate","type":"related"},{"name":"3-sulfanylpropanoyl","type":"related"},{"name":"Thioacyl","type":"related"}],"termid":"MOD:00497"}


id: GO:0022000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The close range interaction of the anterior neural ridge to the caudal region of the neural plate that specifies the forebrain fate.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"forebrain induction by the anterior neural ridge","termid":"GO:0022000"}


id: FYPO:0003313
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and in which the nucleus does not divide. The cell does not divide, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell","termid":"FYPO:0004255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0000004"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, mononucleate cell with elongated germ tube","synonyms":[{"name":"inviable after spore germination, without cell division, elongated mononucleate cell","type":"exact"},{"name":"inviable germinated spore, without cell division, mononucleate cell with elongated germ tube","type":"exact"},{"name":"inviable mononucleate germinated spore with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, mononucleate cell with elongated germ tube","type":"exact"},{"name":"mononucleate after spore germination with elongated germ tube","type":"exact"}],"termid":"FYPO:0003313"}


id: PBO:0089971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smaug family RNA-binding protein Vts1","termid":"PBO:0089971"}


id: PATO:0001141
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001141 ig a concentration value (obsolete PATO:0001141)","termid":"PATO:0001141"}


id: MONDO:0006732
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal movements, including hyperkinesis; hypokinesia; tremor; and dystonia, associated with the use of certain medications or drugs. Muscles of the face, trunk, neck, and extremities are most commonly affected. Tardive dyskinesia refers to abnormal hyperkinetic movements of the muscles of the face, tongue, and neck associated with the use of neuroleptic agents (see antipsychotic agents). (Adams et al., Principles of Neurology, 6th ed, p1199)","definition_xrefs":["MESH:D004409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"drug-induced dyskinesia","secondary_identifiers":["MedDRA:10013916","MEDGEN:3935","SCTID:102448004","UMLS:C0013386","EFO:1000904","ICD9:333.99"],"termid":"MONDO:0006732","xrefs":{"Monarch":{"xref_id":"0006732"}}}


id: PBO:0082550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Central component of the peroxisomal importomer complex; peroxisomal protein import machinery docking complex component; interacts with both PTS1 (Pex5p) and PTS2 (Pex7p) peroxisomal matrix protein signal recognition factors and membrane receptor Pex13p","termid":"PBO:0082550"}


id: GO:1900702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of orcinol biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of orcinol biosynthetic process","termid":"GO:1900701"},{"relation_name":"negatively_regulates","term_name":"orcinol biosynthetic process","termid":"GO:0046197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of orcinol biosynthetic process","synonyms":[{"name":"down regulation of orcinol anabolism","type":"exact"},{"name":"down regulation of orcinol biosynthesis","type":"exact"},{"name":"down regulation of orcinol biosynthetic process","type":"exact"},{"name":"down regulation of orcinol formation","type":"exact"},{"name":"down regulation of orcinol synthesis","type":"exact"},{"name":"down-regulation of orcinol anabolism","type":"exact"},{"name":"down-regulation of orcinol biosynthesis","type":"exact"},{"name":"down-regulation of orcinol biosynthetic process","type":"exact"},{"name":"down-regulation of orcinol formation","type":"exact"},{"name":"down-regulation of orcinol synthesis","type":"exact"},{"name":"downregulation of orcinol anabolism","type":"exact"},{"name":"downregulation of orcinol biosynthesis","type":"exact"},{"name":"downregulation of orcinol biosynthetic process","type":"exact"},{"name":"downregulation of orcinol formation","type":"exact"},{"name":"downregulation of orcinol synthesis","type":"exact"},{"name":"inhibition of orcinol anabolism","type":"exact"},{"name":"inhibition of orcinol biosynthesis","type":"exact"},{"name":"inhibition of orcinol biosynthetic process","type":"narrow"},{"name":"inhibition of orcinol formation","type":"exact"},{"name":"inhibition of orcinol synthesis","type":"exact"},{"name":"negative regulation of orcinol anabolism","type":"exact"},{"name":"negative regulation of orcinol biosynthesis","type":"exact"},{"name":"negative regulation of orcinol formation","type":"exact"},{"name":"negative regulation of orcinol synthesis","type":"exact"}],"termid":"GO:1900702"}


id: GO:0032898
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of a neurotrophin due to biosynthesis or secretion by cells in a neuron's target field, resulting in an increase in its intracellular or extracellular levels. A neurotrophin is any of a family of growth factors that prevent apoptosis in neurons and promote nerve growth.","definition_xrefs":["GOC:ecd","GOC:mah","GOC:mtg_MIT_16mar07"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurotrophin production","termid":"GO:0032898"}


id: FYPO:0000650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the septation index is higher than normal. The septation index is the proportion of the population undergoing septation at any given time, and is usually around 10% (varying between 7-15%) for wild type.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"increased septation index","synonyms":[{"name":"increased number of septated cells","type":"exact"},{"name":"increased septation","type":"related"},{"name":"septated","type":"related"}],"termid":"FYPO:0000650"}


id: PBO:0029554
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethyl_methanesulfonate","termid":"PBO:0029554"}


id: PBO:0088811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport protein Sft2","termid":"PBO:0088811"}


id: GO:0050624
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,2-dihydrovomilenine + NADP+ = H+ + NADPH + vomilenine.","definition_xrefs":["EC:1.5.1.32","RHEA:16409"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"vomilenine reductase activity","secondary_identifiers":["MetaCyc:1.5.1.32-RXN","KEGG_REACTION:R05878"],"synonyms":[{"name":"1,2-dihydrovomilenine:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0050624"}


id: MONDO:1011554
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ligneous membranitis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligneous membranitis, non-human animal","termid":"MONDO:1011459"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligneous membranitis, dog","secondary_identifiers":["OMIA:002020-9615"],"termid":"MONDO:1011554","xrefs":{"Monarch":{"xref_id":"1011554"}}}


id: PBO:0086429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative hydrolase acting on ester bonds","termid":"PBO:0086429"}


id: PBO:0043506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 1","termid":"PBO:0043506"}


id: PBO:0040340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit c locus 3","termid":"PBO:0040340"}


id: PR:P0CT83
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1201 gene.","definition_xrefs":["UniProtKB:P0CT83","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L12-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.13c","synonyms":[{"name":"Spom972h-rpl1201","type":"exact"}],"termid":"PR:P0CT83"}


id: MONDO:1011593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Portosystemic shunt that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"portosystemic shunt, non-human animal","termid":"MONDO:1011409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic shunt, pig","secondary_identifiers":["OMIA:000817-9823"],"termid":"MONDO:1011593","xrefs":{"Monarch":{"xref_id":"1011593"}}}


id: MONDO:0003111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm with neuroendocrine differentiation that arises from the stomach. It includes well differentiated neuroendocrine tumors (low and intermediate grade) and poorly differentiated neuroendocrine carcinomas (high grade).","definition_xrefs":["NCIT:C5696"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete gastrointestinal neuroendocrine benign tumor (obsolete MONDO:0002891)","termid":"MONDO:0002891"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"},{"relation_name":"is_a","term_name":"digestive system neuroendocrine neoplasm","termid":"MONDO:0024503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastric neuroendocrine neoplasm","secondary_identifiers":["Orphanet:100075","SCTID:721194008","MEDGEN:232548","DOID:4715","GARD:19750","UMLS:C1333783"],"synonyms":[{"name":"NET of stomach","type":"exact"},{"name":"gastric neuroendocrine neoplasm","type":"exact"},{"name":"neuroendocrine neoplasm of stomach","type":"exact"},{"name":"neuroendocrine neoplasm of the stomach","type":"exact"},{"name":"neuroendocrine tumor of stomach","type":"related"},{"name":"neuroendocrine tumor of the stomach","type":"exact"},{"name":"neuroendocrine tumour of stomach","type":"related"},{"name":"neuroendocrine tumour of the stomach","type":"exact"},{"name":"stomach NET","type":"exact"},{"name":"stomach neuroendocrine neoplasm","type":"exact"},{"name":"stomach neuroendocrine tumor","type":"exact"},{"name":"stomach neuroendocrine tumor, well differentiated, low or intermediate grade","type":"exact"},{"name":"stomach neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0003111","xrefs":{"Monarch":{"xref_id":"0003111"}}}


id: PR:Q9US05
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein AATF that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00701","PANTHER:PTHR15565:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein bfr2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC664.08c","secondary_identifiers":["UniProtKB:Q9US05"],"synonyms":[{"name":"Spom972h-AATF","type":"exact"}],"termid":"PR:Q9US05"}


id: GO:0009864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by jasmonic acid involved in induced systemic resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activation of innate immune response","termid":"GO:0002218"},{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"jasmonic acid mediated signaling pathway","termid":"GO:0009867"},{"relation_name":"part_of","term_name":"induced systemic resistance","termid":"GO:0009682"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"induced systemic resistance, jasmonic acid mediated signaling pathway","synonyms":[{"name":"induced systemic resistance, jasmonic acid mediated signalling pathway","type":"exact"},{"name":"jasmonic acid mediated signaling pathway (induced systemic resistance)","type":"exact"}],"termid":"GO:0009864"}


id: GO:0004593
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantothenate + H2O = (R)-pantoate + beta-alanine.","definition_xrefs":["RHEA:12448","EC:3.5.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"pantothenase activity","secondary_identifiers":["KEGG_REACTION:R02474","MetaCyc:PANTOTHENASE-RXN"],"synonyms":[{"name":"(R)-pantothenate amidohydrolase activity","type":"related"},{"name":"pantothenate amidohydrolase activity","type":"related"},{"name":"pantothenate hydrolase activity","type":"related"}],"termid":"GO:0004593"}


id: GO:1903499
data:
  {"annotated_genes":["SJAG_01805","SJAG_03048","SJAG_02838","SJAG_00082","SJAG_00845","SJAG_01787","SJAG_02392","SJAG_04597","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95821,121355],"is_not":false,"summary":null,"term":"GO:1903499"},{"annotations":[96379,92776,104383,105710,112817,97864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[96421,92008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic actomyosin contractile ring assembly.","definition_xrefs":["GOC:vw","GOC:al","GOC:mtg_cell_cycle","GOC:TermGenie","PMID:18256290","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"is_a","term_name":"regulation of cytokinesis, actomyosin contractile ring assembly","termid":"GO:2000431"},{"relation_name":"regulates","term_name":"mitotic actomyosin contractile ring assembly","termid":"GO:1903475"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00845":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0030036","GO:0008150","GO:0007010","GO:0000281","GO:0044085"],"is_obsolete":false,"name":"regulation of mitotic actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000107":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of actomyosin contractile ring assembly involved in cytokinesis after mitosis","type":"exact"},{"name":"regulation of contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"regulation of cytokinesis, actomyosin contractile ring assembly involved in mitotic cytokinesis","type":"exact"},{"name":"regulation of mitotic cytokinesis, actomyosin contractile ring assembly","type":"exact"}],"termid":"GO:1903499","terms_by_termid":{"GO:0120306":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: PBO:0061531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase","termid":"PBO:0061531"}


id: PBO:0072972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretoglobin family 1D member 2","termid":"PBO:0072972"}


id: MONDO:0016971
data:
  {"annotated_genes":["SJAG_03470","SJAG_04228","SJAG_04316","SJAG_04053","SJAG_01491","SJAG_03188","SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87659],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0021018"},{"annotations":[87764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012034"},{"annotations":[87174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[88652,88653],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[87922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[88551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957270"}]},"cv_name":"mondo","definition":"Limb-girdle muscular dystrophy (LGMD) is a heterogeneous group of muscular dystrophies characterized by proximal weakness affecting the pelvic and shoulder girdles. Cardiac and respiratory impairment may be observed in certain forms of LGMD.","definition_xrefs":["Orphanet:263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_03470":null,"SJAG_03715":null,"SJAG_04053":null,"SJAG_04228":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"limb-girdle muscular dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0686353","SCTID:78468005","DOID:11724","NANDO:1200490","MESH:D049288","NCIT:C84828","MEDGEN:151940","icd11.foundation:887807212","NANDO:2200858","GARD:6907"],"synonyms":[{"name":"LGMD","type":"exact"},{"name":"Leyden-Mbius muscular dystrophy","type":"exact"},{"name":"Leyden-Mobius muscular dystrophy","type":"exact"},{"name":"erb's muscular dystrophy","type":"exact"},{"name":"limb girdle muscular dystrophy","type":"exact"},{"name":"limb-girdle muscular dystrophy","type":"exact"}],"termid":"MONDO:0016971","terms_by_termid":{"MONDO:0012034":null,"MONDO:0012248":null,"MONDO:0013162":null,"MONDO:0014142":null,"MONDO:0021018":null,"MONDO:0957270":null},"xrefs":{"Monarch":{"xref_id":"0016971"}}}


id: MONDO:0044762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diarrhea that results from increased motility in the bowel; significant increases in bowel motility can deliver excessively large volumes of stool to the colon. Diarrhea can result when the maximum colonic absorptive capacity of 4 liters a day is exceeded. Also, an alteration in colonic motility such that bowel contents are emptied before adequate absorption can occur has been offered as a possible explanation for the diarrhea associated with irritable bowel disease.","direct_ancestors":[{"relation_name":"is_a","term_name":"diarrheal disease secondary to altered bowel motility","termid":"MONDO:0000251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrheal disease secondary to increased bowel motility","secondary_identifiers":["DOID:0050131"],"synonyms":[{"name":"diarrhea from increased bowel motility","type":"exact"},{"name":"diarrhoea from increased bowel motility","type":"exact"},{"name":"motility-related diarrhea","type":"broad"},{"name":"motility-related diarrhoea","type":"broad"}],"termid":"MONDO:0044762","xrefs":{"Monarch":{"xref_id":"0044762"}}}


id: GO:0140542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a piRNA.","definition_xrefs":["PMID:28847004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"piRNA transcription","termid":"GO:0140541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006355","GO:0006351"],"is_obsolete":false,"name":"regulation of piRNA transcription","termid":"GO:0140542"}


id: PBO:0005713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine-N7-)-methyltransferase subunit Trm82 (predicted)","termid":"PBO:0005713"}


id: PBO:0087488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of COMPASS (Set1C) complex; COMPASS methylates Lys4 of histone H3 and functions in silencing at telomeres; has a C-terminal Sdc1 Dpy-30 Interaction (SDI) domain that mediates binding to Sdc1p; similar to trithorax-group protein ASH2L","termid":"PBO:0087488"}


id: PBO:0029200
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_clotrimazole","termid":"PBO:0029200"}


id: PR:O43089
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cbp6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome B pre-mRNA-processing protein 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.14c","synonyms":[{"name":"Spom972h-cbp6","type":"exact"}],"termid":"PR:O43089"}


id: PBO:0034126
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_target_start_location","termid":"PBO:0034126"}


id: PBO:0042256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 3","termid":"PBO:0042256"}


id: PBO:0065311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 33","termid":"PBO:0065311"}


id: GO:0052598
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histamine + O2 = H2O2 + imidazole-4-acetaldehyde + NH4+.","definition_xrefs":["RHEA:25625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diamine oxidase activity","termid":"GO:0052597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"histamine oxidase activity","secondary_identifiers":["MetaCyc:RXN-9600","Reactome:R-HSA-5696131","KEGG_REACTION:R02150"],"synonyms":[{"name":"1H-Imidazole-4-ethanamine oxidase activity","type":"exact"},{"name":"1H-Imidazole-4-ethanamine:oxygen oxidoreductase (deaminating) activity","type":"exact"},{"name":"histamine:oxygen oxidoreductase (deaminating) activity","type":"exact"}],"termid":"GO:0052598"}


id: PBO:0039812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 3","termid":"PBO:0039812"}


id: PBO:0089160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S16","termid":"PBO:0089160"}


id: GO:0050653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The elongation of chondroitin sulfate proteoglycan chains by alternate addition of N-acetylhexosamine and GlcUA residues to the GAG-protein linkage region tetrasaccharide of chondroitin sulfate.","definition_xrefs":["GOC:ai","PMID:11788602"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate proteoglycan biosynthetic process, chain elongation (obsolete GO:0050653)","synonyms":[{"name":"chondroitin sulfate proteoglycan anabolism, polysaccharide chain anabolism","type":"exact"},{"name":"chondroitin sulfate proteoglycan biosynthetic process, polysaccharide chain biosynthetic process","type":"exact"},{"name":"chondroitin sulfate proteoglycan chain elongation","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulfate proteoglycan formation, polysaccharide chain formation","type":"exact"},{"name":"chondroitin sulfate proteoglycan synthesis, polysaccharide chain synthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthesis","type":"exact"},{"name":"chondroitin sulphate proteoglycan biosynthesis, polysaccharide chain biosynthetic process","type":"exact"}],"termid":"GO:0050653"}


id: GO:0043077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The activation of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of acetate catabolic process","termid":"GO:0045754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"initiation of acetate catabolic process","synonyms":[{"name":"initiation of acetate breakdown","type":"exact"},{"name":"initiation of acetate catabolism","type":"exact"},{"name":"initiation of acetate degradation","type":"exact"}],"termid":"GO:0043077"}


id: GO:0002154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a thyroid hormone  binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone-mediated signaling pathway","termid":"GO:0009755"},{"relation_name":"is_a","term_name":"nuclear receptor-mediated signaling pathway","termid":"GO:0141193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"thyroid hormone receptor signaling pathway","synonyms":[{"name":"thyroid hormone mediated signalling pathway","type":"exact"}],"termid":"GO:0002154"}


id: PBO:0074455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine oxidase","termid":"PBO:0074455"}


id: GO:0048054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire the specialized features of R2 and R5 photoreceptors. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor cell differentiation","termid":"GO:0001751"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R2/R5 cell differentiation","termid":"GO:0048054"}


id: GO:0072365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a cellular ketone metabolic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular ketone metabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072365)","synonyms":[{"name":"regulation of cellular ketone metabolic process by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"},{"name":"regulation of cellular ketone metabolism by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072365"}


id: PBO:0056690
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple EGF like domains 11","termid":"PBO:0056690"}


id: MONDO:1010579
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes mellitus that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes mellitus, non-human animal","termid":"MONDO:1010052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes mellitus, rabbit","secondary_identifiers":["OMIA:000279-9986"],"termid":"MONDO:1010579","xrefs":{"Monarch":{"xref_id":"1010579"}}}


id: GO:1905939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gonad development.","definition_xrefs":["GOC:TermGenie","PMID:15342467","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"gonad development","termid":"GO:0008406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gonad development","synonyms":[{"name":"regulation of gonadogenesis","type":"exact"}],"termid":"GO:1905939"}


id: PBO:0004477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nem1-Spo7 phosphatase complex catalytic subunit Nem1 (predicted)","termid":"PBO:0004477"}


id: MONDO:0017598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary cutaneous anaplastic large cell lymphoma (C-ALCL) is a rare T-cell non-Hodgkin lymphoma that affects the skin and generally shows no extracutaneous involvement at presentation. It belongs to the spectrum of primary cutaneous CD30+ lymphoproliferative disorders along with lymphomatoid papulosis with which it shares overlapping clinical and histopathologic features.","definition_xrefs":["Orphanet:300865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell non-Hodgkin lymphoma","termid":"MONDO:0000607"},{"relation_name":"is_a","term_name":"primary cutaneous CD30+ T-cell lymphoproliferative disease","termid":"MONDO:0018897"},{"relation_name":"is_a","term_name":"anaplastic large cell lymphoma","termid":"MONDO:0020325"},{"relation_name":"is_a","term_name":"anaplastic cancer","termid":"MONDO:0020633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"primary cutaneous anaplastic large cell lymphoma","secondary_identifiers":["MESH:D054446","ONCOTREE:PCALCL","UMLS:C1301362","NCIT:C6860","MEDGEN:266255","GARD:21247","MedDRA:10065863","icd11.foundation:1972636482"],"synonyms":[{"name":"ALCL, cutaneous","type":"exact"},{"name":"C-ALCL","type":"exact"},{"name":"anaplastic large-cell lymphoma, primary cutaneous type","type":"exact"},{"name":"primary C-ALCL","type":"exact"},{"name":"primary anaplastic large cell lymphoma of skin","type":"exact"},{"name":"primary anaplastic large cell lymphoma of the skin","type":"exact"},{"name":"primary cutaneous CD30 Positive anaplastic large cell lymphoma","type":"exact"},{"name":"primary cutaneous CD30+ ALCL","type":"exact"},{"name":"primary cutaneous CD30+ anaplastic large cell lymphoma","type":"exact"},{"name":"regressive atypical histiocytosis","type":"exact"}],"termid":"MONDO:0017598","xrefs":{"Monarch":{"xref_id":"0017598"}}}


id: PBO:0069131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 381, pseudogene","termid":"PBO:0069131"}


id: MONDO:0013441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy has material basis in compound heterozygous mutation in the TTC21B gene on chromosome 2q24.","definition_xrefs":["DOID:0110088","PMID:21258341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"asphyxiating thoracic dystrophy 4","secondary_identifiers":["GARD:15718","OMIM:613819","UMLS:C3151185","MEDGEN:462535"],"synonyms":[{"name":"ATD4","type":"exact"},{"name":"SRTD4","type":"exact"},{"name":"asphyxiating thoracic dystrophy 4","type":"exact"},{"name":"asphyxiating thoracic dystrophy type 4","type":"exact"},{"name":"short-rib thoracic dysplasia 4 with or without polydactyly","type":"exact"}],"termid":"MONDO:0013441","xrefs":{"Monarch":{"xref_id":"0013441"}}}


id: MONDO:0023472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrodysplasia","termid":"MONDO:0022723"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia situs inversus imperforate anus polydactyly","synonyms":[{"name":"impossible syndrome","type":"related"}],"termid":"MONDO:0023472","xrefs":{"Monarch":{"xref_id":"0023472"}}}


id: GO:0051193
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving a cofactor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cofactor metabolic process (obsolete GO:0051193)","synonyms":[{"name":"regulation of cofactor metabolism","type":"exact"}],"termid":"GO:0051193"}


id: GO:0097355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, or maintained at, a part of a chromosome that is organized into heterochromatin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chromatin","termid":"GO:0071168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to heterochromatin","synonyms":[{"name":"protein localisation to heterochromatin","type":"exact"}],"termid":"GO:0097355"}


id: GO:0030036
data:
  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process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising actin filaments and their associated proteins.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"is_a","term_name":"actin filament-based 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id: MONDO:1010281
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Testicular regression syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"hypogonadism, non-human animal","termid":"MONDO:1010276"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular regression syndrome, non-human animal","secondary_identifiers":["OMIA:001535"],"termid":"MONDO:1010281","xrefs":{"Monarch":{"xref_id":"1010281"}}}


id: PR:O42932
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome b-c1 complex subunit 6, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15336:SF0","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b-c1 complex subunit 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16C6.08c","secondary_identifiers":["UniProtKB:O42932"],"synonyms":[{"name":"SPBC16C6.08c","type":"related"},{"name":"Spom972h-UQCRH","type":"exact"},{"name":"complex III subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"mitochondrial hinge protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquinol-cytochrome c reductase complex subunit 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42932"}


id: PBO:0116604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung cancer associated lncRNA targeting TOP2A","termid":"PBO:0116604"}


id: GO:0003277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process that contributes to the shaping of an endocardial cushion. The endocardial cushion is a specialized region of mesenchymal cells that will give rise to the heart septa and valves.","definition_xrefs":["GOC:mtg_heart","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process involved in heart morphogenesis","termid":"GO:0003278"},{"relation_name":"part_of","term_name":"endocardial cushion morphogenesis","termid":"GO:0003203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apoptotic process involved in endocardial cushion morphogenesis","synonyms":[{"name":"apoptosis involved in endocardial cushion morphogenesis","type":"narrow"}],"termid":"GO:0003277"}


id: MONDO:0005894
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic fungal infection caused by Paracoccidioides brasiliensis that is most often seen in immunocompromised patients. It affects the mucous membranes, lymph nodes, lungs and bones.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paracoccidioidomycosis","secondary_identifiers":["MedDRA:10061906","Orphanet:73260","ICD10CM:B41","GARD:7323","NORD:1553","EFO:0007417","ICD10WHO:B41","icd11.foundation:268777657","MEDGEN:14601","NCIT:C34891","MESH:D010229","DOID:12662","ICD9:116.1","SCTID:36866003","UMLS:C0030409"],"synonyms":[{"name":"Lutz-Splendore-Almeida disease","type":"related"},{"name":"PCM","type":"related"},{"name":"Paracoccidioidal granuloma","type":"related"},{"name":"South American blastomycosis","type":"related"},{"name":"lobo disease","type":"related"},{"name":"mucocutaneous-lymphangitic paracoccidioidomycosis","type":"exact"},{"name":"paracoccidioidal mycosis","type":"exact"}],"termid":"MONDO:0005894","xrefs":{"Monarch":{"xref_id":"0005894"}}}


id: GO:0010520
data:
  {"annotated_genes":["SJAG_03438","SJAG_01677","SJAG_02592","SJAG_01401","SJAG_04205","SJAG_03699","SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91178,96387,103643,118346,119140],"is_not":false,"summary":null,"term":"GO:0010520"},{"annotations":[110006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010846"},{"annotations":[110009],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045128"},{"annotations":[91070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010845"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of recombination during meiosis. Reciprocal meiotic recombination is the cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA recombination","termid":"GO:0000018"},{"relation_name":"is_a","term_name":"regulation of cell cycle process","termid":"GO:0010564"},{"relation_name":"is_a","term_name":"regulation of reproductive process","termid":"GO:2000241"},{"relation_name":"regulates","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_01401":null,"SJAG_01677":null,"SJAG_02592":null,"SJAG_03438":null,"SJAG_03699":null,"SJAG_04205":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0007049","GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"regulation of reciprocal meiotic recombination","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010520","terms_by_termid":{"GO:0010520":null,"GO:0010845":null,"GO:0010846":null,"GO:0045128":null}}


id: PBO:0059129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPHOSPH6 divergent transcript","termid":"PBO:0059129"}


id: PBO:0058404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4774","termid":"PBO:0058404"}


id: GO:0033145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the activity of any intracellular steroid hormone receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular steroid hormone receptor signaling pathway","termid":"GO:0033143"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of intracellular steroid hormone receptor signaling pathway","synonyms":[{"name":"positive regulation of steroid hormone receptor signaling pathway","type":"broad"},{"name":"positive regulation of steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0033145"}


id: MONDO:1012287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive ataxia, non-human animal","termid":"MONDO:1011633"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive ataxia, dog","secondary_identifiers":["OMIA:001091-9615"],"termid":"MONDO:1012287","xrefs":{"Monarch":{"xref_id":"1012287"}}}


id: PBO:0042028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 85C","termid":"PBO:0042028"}


id: GO:0052485
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism stops, prevents, or reduces the frequency, rate or extent of the inflammatory response of a symbiont organism; the inflammatory response is the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of symbiont inflammatory response (obsolete GO:0052485)","synonyms":[{"name":"negative regulation by organism of symbiont inflammatory response","type":"exact"}],"termid":"GO:0052485"}


id: GO:0097431
data:
  {"annotated_genes":["SJAG_02761","SJAG_02624"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102392,120212],"is_not":false,"summary":null,"term":"GO:0097431"}]},"cv_name":"cellular_component","definition":"Either of the ends of a mitotic spindle, a spindle that forms as part of mitosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02624":null,"SJAG_02761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0072686","GO:0015630"],"is_obsolete":false,"name":"mitotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0097431","terms_by_termid":{"GO:0097431":null}}


id: MONDO:0024857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immature teratoma that develops as a primary tumor in an anatomic site other than the testis or ovary.","definition_xrefs":["NCIT:C8884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant teratoma","termid":"MONDO:0003514"},{"relation_name":"is_a","term_name":"extragonadal nonseminomatous germ cell tumor","termid":"MONDO:0003578"},{"relation_name":"is_a","term_name":"immature teratoma","termid":"MONDO:0024746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"immature extragonadal teratoma","secondary_identifiers":["MEDGEN:167781","UMLS:C0855163"],"synonyms":[{"name":"extragonadal primary malignant teratoma","type":"exact"},{"name":"immature extragonadal teratoma","type":"exact"},{"name":"malignant extragonadal teratoma","type":"exact"},{"name":"primary malignant extragonadal teratoma","type":"exact"}],"termid":"MONDO:0024857","xrefs":{"Monarch":{"xref_id":"0024857"}}}


id: MONDO:0035362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the TRIM22 gene.","definition_xrefs":["PMID:26836588","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"TRIM22-related inflammatory bowel disease","secondary_identifiers":["UMLS:C5680271","MEDGEN:1842464","Orphanet:597201","GARD:22395"],"synonyms":[{"name":"TRIM22-related IBD","type":"exact"}],"termid":"MONDO:0035362","xrefs":{"Monarch":{"xref_id":"0035362"}}}


id: GO:0061970
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The organization process that preserves the right sidedness in an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["GOC:BHF","PMID:18629866"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of left/right asymmetry","termid":"GO:0061968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of right sidedness","termid":"GO:0061970"}


id: PBO:0002560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-alpha-hydroxytetrahydrobiopterin dehydratase (predicted)","termid":"PBO:0002560"}


id: MONDO:0019654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial idiopathic steroid-resistant nephrotic syndrome with diffuse mesangial sclerosis","secondary_identifiers":["NANDO:2200111","Orphanet:93217"],"termid":"MONDO:0019654","xrefs":{"Monarch":{"xref_id":"0019654"}}}


id: GO:0001774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a microglial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["PMID:10695728","PMID:12580336","PMID:10626665","PMID:9893949","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte activation involved in inflammatory response","termid":"GO:0002269"},{"relation_name":"is_a","term_name":"macrophage activation","termid":"GO:0042116"},{"relation_name":"is_a","term_name":"glial cell activation","termid":"GO:0061900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"microglial cell activation","termid":"GO:0001774"}


id: PBO:0081479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 354C","termid":"PBO:0081479"}


id: PBO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 61","termid":"PBO:0050358"}


id: PBO:0110345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDCA7 pseudogene 1","termid":"PBO:0110345"}


id: GO:0032177
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Two separate septin rings that are formed from the septin collar at the time of cytokinesis in cells that divide by budding. These two rings are thought to delineate a special compartment in which factors involved in cytokinesis are concentrated.","definition_xrefs":["GOC:krc","PMID:16009555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular bud neck septin structure","termid":"GO:0000399"},{"relation_name":"is_a","term_name":"cleavage apparatus septin structure","termid":"GO:0032161"},{"relation_name":"is_a","term_name":"split septin rings","termid":"GO:0032176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cellular bud neck split septin rings","termid":"GO:0032177"}


id: MONDO:0100158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spectrum of presentations resulting from biallelic protein-altering variation in CHRNG. Inactivation of the receptor during early development leads to prenatal hypo-akinesia; subsequent phenotypes are a consequence of this hypo-akinesia and are thought to be dependent upon timing and severity of the anomaly at the neuromuscular junction. A range of phenotypes varying in severity (including both lethal and non-lethal presentations) have been reported, but typically include joint contractures, pterygia, dysmorphic features, vertebral and thoracic anomalies, and additional variable abnormalities. There are no clear genotype-phenotype correlations between the lethal and non-lethal presentations of this spectrum; both inter- and intra-familial variability have been reported, with the same variants being observed in both lethal and non-lethal cases.","definition_xrefs":["PMID:22167768","PMID:30868735","PMID:16826531","PMID:16826520"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple pterygium syndrome","termid":"MONDO:0017415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHRNG-associated hypo-akinesia disorder of prenatal onset","termid":"MONDO:0100158","xrefs":{"Monarch":{"xref_id":"0100158"}}}


id: PBO:0059928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 14","termid":"PBO:0059928"}


id: PBO:0044879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENN domain containing 6A","termid":"PBO:0044879"}


id: PBO:0001757
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-expressed with adjacent gene","termid":"PBO:0001757"}


id: PBO:0004965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleotide-sugar 4,6-dehydratase (predicted)","termid":"PBO:0004965"}


id: MONDO:0007270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated restrictive cardiomyopathy in which the cause of the disease is a mutation in the TNNI3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial restrictive cardiomyopathy","termid":"MONDO:0016340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy, familial restrictive, 1","secondary_identifiers":["MESH:C566168","GARD:18070","MEDGEN:396236","UMLS:C1861861","DOID:0111425","OMIM:115210"],"synonyms":[{"name":"RCM1","type":"related"},{"name":"Rcm","type":"related"},{"name":"TNNI3 familial isolated restrictive cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, familial restrictive, 1","type":"exact"},{"name":"cardiomyopathy, familial restrictive, type 1","type":"exact"},{"name":"familial isolated restrictive cardiomyopathy caused by mutation in TNNI3","type":"exact"}],"termid":"MONDO:0007270","xrefs":{"Monarch":{"xref_id":"0007270"}}}


id: PBO:0121027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTN4IP1 pseudogene 1","termid":"PBO:0121027"}


id: PBO:0081012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 46","termid":"PBO:0081012"}


id: GO:0050230
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: DNA 4,6-diamino-5-formamidopyrimidine = DNA adenine + H2O.","definition_xrefs":["MetaCyc:PURINE-IMIDAZOLE-RING-CYCLASE-RXN","EC:4.3.2.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"amidine-lyase activity","termid":"GO:0016842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0009975","GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"purine imidazole-ring cyclase activity","synonyms":[{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine 8-C,9-N-lyase (cyclizing; DNA-adenine-forming)","type":"related"},{"name":"DNA-4,6-diamino-5-formamidopyrimidine C8-N9-lyase (cyclizing; DNA-adenine-forming)","type":"related"}],"termid":"GO:0050230"}


