# terms

id: PR:O13882
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mrps18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13882"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"37S ribosomal protein S18, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.18c","synonyms":[{"name":"Spom972h-mrps18","type":"exact"}],"termid":"PR:O13882"}


id: PR:Q09890
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC584.16c gene.","definition_xrefs":["UniProtKB:Q09890","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C584.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC584.16c","synonyms":[{"name":"Spom972h-SPCC584.16c","type":"exact"}],"termid":"PR:Q09890"}


id: GO:2000011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adaxial/abaxial pattern formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"adaxial/abaxial pattern specification","termid":"GO:0009955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of adaxial/abaxial pattern formation","synonyms":[{"name":"regulation of adaxial/abaxial pattern specification","type":"related"}],"termid":"GO:2000011"}


id: PBO:0041622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium binding protein, spermatid associated 1","termid":"PBO:0041622"}


id: GO:0150025
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an oxidised low-density lipoprotein particle and delivering the oxidised low-density lipoprotein particle into the cell via endocytosis.","definition_xrefs":["GOC:aruk","PMID:27607416","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle receptor activity","termid":"GO:0030228"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038024"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"oxidised low-density lipoprotein particle receptor activity","synonyms":[{"name":"ox-LDL particle receptor activity","type":"exact"},{"name":"ox-LDL receptor activity","type":"related"},{"name":"oxLDL particle receptor activity","type":"exact"},{"name":"oxLDL receptor activity","type":"related"},{"name":"oxidised LDL particle receptor activity","type":"exact"},{"name":"oxidised LDL receptor activity","type":"related"},{"name":"oxidised low-density lipoprotein receptor activity","type":"related"},{"name":"oxidized LDL particle receptor activity","type":"exact"},{"name":"oxidized LDL receptor activity","type":"related"},{"name":"oxidized low-density lipoprotein particle receptor activity","type":"exact"},{"name":"oxidized low-density lipoprotein receptor activity","type":"related"}],"termid":"GO:0150025"}


id: PBO:0109112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 2B, tRNA N3-cytidine","termid":"PBO:0109112"}


id: GO:0046228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2,4,5-trichlorophenoxyacetic acid, a chlorinated aromatic compound widely used as a herbicide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"2,4,5-trichlorophenoxyacetic acid catabolic process","synonyms":[{"name":"2,4,5-trichlorophenoxyacetic acid breakdown","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid catabolism","type":"exact"},{"name":"2,4,5-trichlorophenoxyacetic acid degradation","type":"exact"}],"termid":"GO:0046228"}


id: GO:0048581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of post-embryonic development. Post-embryonic development is defined as the process whose specific outcome is the progression of the organism over time, from the completion of embryonic development to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"post-embryonic development","termid":"GO:0009791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of post-embryonic development","synonyms":[{"name":"down regulation of post-embryonic development","type":"exact"},{"name":"down-regulation of post-embryonic development","type":"exact"},{"name":"downregulation of post-embryonic development","type":"exact"},{"name":"inhibition of post-embryonic development","type":"narrow"}],"termid":"GO:0048581"}


id: PBO:0028701
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_meiosis","termid":"PBO:0028701"}


id: MONDO:0004395
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mixed oligodendroglioma-astrocytoma (obsolete MONDO:0004395)","termid":"MONDO:0004395","xrefs":{"Monarch":{"xref_id":"0004395"}}}


id: GO:2000814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of barbed-end actin filament capping.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of barbed-end actin filament capping","termid":"GO:2000812"},{"relation_name":"positively_regulates","term_name":"barbed-end actin filament capping","termid":"GO:0051016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0044085","GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"positive regulation of barbed-end actin filament capping","synonyms":[{"name":"positive regulation of barbed-end F-actin capping activity","type":"exact"},{"name":"positive regulation of barbed-end actin capping activity","type":"exact"},{"name":"positive regulation of plus-end F-actin capping activity","type":"exact"},{"name":"positive regulation of plus-end actin filament capping activity","type":"exact"}],"termid":"GO:2000814"}


id: FYPO:0008218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a cell does not execute a mitotic S/G2 cell cycle phase transition normally.","definition_xrefs":["PMID:10947840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle phase transition","termid":"FYPO:0005275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic S/G2 phase transition","termid":"FYPO:0008218"}


id: PBO:0042484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin 9","termid":"PBO:0042484"}


id: MONDO:0022653
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cardiomyopathy due to anthracyclines","secondary_identifiers":["MEDGEN:1755373","UMLS:C5437452","GARD:1107"],"termid":"MONDO:0022653","xrefs":{"Monarch":{"xref_id":"0022653"}}}


id: PBO:0072094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 25","termid":"PBO:0072094"}


id: PBO:0091478
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 Homology Domain","termid":"PBO:0091478"}


id: PBO:0016114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule regulator Mtr1","termid":"PBO:0016114"}


id: PBO:0076230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUPT20H like 1","termid":"PBO:0076230"}


id: GO:0070152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling isoleucine to isoleucyl-tRNA in a mitochondrion, catalyzed by isoleucyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:mah","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoleucyl-tRNA aminoacylation","termid":"GO:0006428"},{"relation_name":"is_a","term_name":"tRNA aminoacylation for mitochondrial protein translation","termid":"GO:0070127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"part_of","termid":"GO:0140053"},{"rel_name":"is_a","termid":"GO:0006399"}],"interesting_parent_ids":["GO:0140053","GO:0010467","GO:0008150","GO:0006520","GO:0006399"],"is_obsolete":false,"name":"mitochondrial isoleucyl-tRNA aminoacylation","termid":"GO:0070152"}


id: PBO:0087358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Splicing factor that reanneals snRNPs during spliceosome recycling; reanneals U4 and U6 snRNPs","termid":"PBO:0087358"}


id: PBO:0039022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGA divergent transcript","termid":"PBO:0039022"}


id: GO:0052578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate = (E,E)-alpha-farnesene + diphosphate.","definition_xrefs":["MetaCyc:RXN-8574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene synthase activity","termid":"GO:0010334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alpha-farnesene synthase activity","secondary_identifiers":["RHEA:27421"],"synonyms":[{"name":"(E,E)-alpha-farnesene synthase activity","type":"exact"}],"termid":"GO:0052578"}


id: PBO:0088305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosomal and vacuolar ubiquitin-protein ligase E3/phosphatidylinositol(3)-phosphate binding protein Pib1","termid":"PBO:0088305"}


id: GO:0015255
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the energy-independent facilitated diffusion of propanediol through a transmembrane aqueous pore or channel.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete propanediol channel activity (obsolete GO:0015255)","termid":"GO:0015255"}


id: PBO:0061124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 13","termid":"PBO:0061124"}


id: PBO:0017791
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heredopathia Atactica Polyneuritiformis","termid":"PBO:0017791"}


id: PBO:0050010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexokinase 2 pseudogene 1","termid":"PBO:0050010"}


id: GO:0051377
data:
  {"annotated_genes":["SJAG_04165","SJAG_02488","SJAG_02523","SJAG_03506"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73842,80218,116845],"is_not":false,"summary":null,"term":"GO:0051377"},{"annotations":[79427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051267"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of ethanolamine phosphate to a mannose residue in the GPI lipid precursor.","definition_xrefs":["PMID:15632136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02488":null,"SJAG_02523":null,"SJAG_03506":null,"SJAG_04165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"}],"interesting_parent_ids":["GO:0003824","GO:0016780","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"mannose-ethanolamine phosphotransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-162798"],"synonyms":[{"name":"EtN-P transferase activity","type":"exact"},{"name":"addition of ethanolamine phosphate to mannose of GPI precursor","type":"exact"},{"name":"ethanolamine phosphate transferase activity","type":"broad"},{"name":"phosphoethanolamine transferase activity","type":"broad"}],"termid":"GO:0051377","terms_by_termid":{"GO:0051267":null,"GO:0051377":null}}


id: FYPO:0002042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to iron ion starvation is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level during cellular response to iron ion starvation","termid":"FYPO:0003196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased RNA level during cellular response to iron ion starvation","synonyms":[{"name":"decreased RNA accumulation during cellular response to iron ion starvation","type":"related"},{"name":"decreased RNA level during cellular response to iron ion depletion","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion deprivation","type":"exact"},{"name":"decreased RNA level during cellular response to iron ion starvation during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during cellular response to iron ion starvation during vegetative growth","type":"exact"},{"name":"decreased RNA level during cellular response to iron starvation","type":"exact"},{"name":"decreased RNA level during iron ion starvation","type":"exact"},{"name":"decreased mRNA level during cellular response to iron ion starvation","type":"narrow"},{"name":"decreased transcript level during cellular response to iron ion starvation","type":"exact"},{"name":"reduced RNA level during cellular response to iron ion starvation","type":"exact"}],"termid":"FYPO:0002042"}


id: FYPO:0005289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of the mitotic actomyosin contractile ring in the correct location is abnormal.","definition_xrefs":["PMID:26132084","GO:0032189","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"actomyosin contractile ring displaced from midpoint","termid":"FYPO:0002026"},{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0000138","FYPO:0000002","FYPO:0000032"],"is_obsolete":false,"name":"actomyosin contractile ring sliding","synonyms":[{"name":"abnormal cytokinetic ring anchoring involved in mitotic cell cycle","type":"related"},{"name":"abnormal maintenance of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"actomyosin contractile ring sliding during mitotic cell cycle","type":"related"},{"name":"actomyosin contractile ring sliding during vegetative growth","type":"exact"}],"termid":"FYPO:0005289"}


id: GO:0097017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which proteins are taken up from the collecting ducts, glomerulus and proximal and distal loops of the nephron. In non-mammalian species, absorption may occur in related structures (e.g. protein absorption is observed in nephrocytes in Drosophila, see PMID:23264686).","definition_xrefs":["PMID:18431508","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal absorption","termid":"GO:0070293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal protein absorption","termid":"GO:0097017"}


id: PBO:0038274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino_acid_insertion_and_deletion","termid":"PBO:0038274"}


id: GO:0046679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a streptomycin stimulus. Streptomycin is a commonly used antibiotic in cell culture media which acts only on prokaryotes and blocks transition from initiation complex to chain elongating ribosome.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to antibiotic","termid":"GO:0046677"},{"relation_name":"is_a","term_name":"response to glycoside","termid":"GO:1903416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to streptomycin","synonyms":[{"name":"streptomycin susceptibility/resistance","type":"related"}],"termid":"GO:0046679"}


id: GO:0047100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + NADP+ + glyceraldehyde-3-phosphate = NADPH + 3-phospho-D-glyceroyl-phosphate.","definition_xrefs":["MetaCyc:1.2.1.13-RXN","EC:1.2.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (phosphorylating) activity","termid":"GO:0043891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP+) (phosphorylating) activity","secondary_identifiers":["RHEA:10296"],"synonyms":[{"name":"D-glyceraldehyde-3-phosphate:NADP+ oxidoreductase (phosphorylating)","type":"related"},{"name":"NADP-dependent glyceraldehyde phosphate dehydrogenase activity","type":"related"},{"name":"NADP-dependent glyceraldehyde-3-phosphate dehydrogenase activity","type":"related"},{"name":"NADP-triose phosphate dehydrogenase activity","type":"related"},{"name":"dehydrogenase, glyceraldehyde phosphate (nicotinamide adenine dinucleotide phosphate) (phosphorylating)","type":"related"},{"name":"glyceraldehyde phosphate dehydrogenase (nicotinamide adenine dinucleotide phosphate) (phosphorylating)","type":"related"},{"name":"triosephosphate dehydrogenase (NADP(+)) activity","type":"related"},{"name":"triosephosphate dehydrogenase (NADP)","type":"related"},{"name":"triosephosphate dehydrogenase (NADP+) activity","type":"related"}],"termid":"GO:0047100"}


id: PBO:0047155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 184 member A","termid":"PBO:0047155"}


id: MOD:02022
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-cervonoyl-L-lysine.","direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-cervonoylated residue","termid":"MOD:02023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-cervonoyl-L-lysine","termid":"MOD:02022"}


id: PBO:0056118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LYR motif containing 4","termid":"PBO:0056118"}


id: PBO:0011974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine diphosphokinase Tnr3/ Nudix hydrolase fusion protein","termid":"PBO:0011974"}


id: GO:0030766
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 11-O-demethyl-17-O-deacetylvindoline = S-adenosyl-L-homocysteine + 17-O-deacetylvindoline.","definition_xrefs":["EC:2.1.1.94"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"11-O-demethyl-17-O-deacetylvindoline O-methyltransferase activity","secondary_identifiers":["RHEA:20992","MetaCyc:2.1.1.94-RXN"],"synonyms":[{"name":"11-demethyl-17-deacetylvindoline 11-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:11-O-demethyl-17-O-deacetylvindoline 11-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:16-hydroxytabersonine 16-O-methyltransferase activity","type":"related"},{"name":"tabersonine 16-O-methyltransferase activity","type":"related"}],"termid":"GO:0030766"}


id: GO:0045724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the formation of a cilium.","definition_xrefs":["GOC:go_curators","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"is_a","term_name":"regulation of cilium assembly","termid":"GO:1902017"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cilium assembly","synonyms":[{"name":"activation of cilium assembly","type":"narrow"},{"name":"positive regulation of flagellum assembly","type":"broad"},{"name":"positive regulation of flagellum biogenesis","type":"related"},{"name":"stimulation of cilium assembly","type":"narrow"},{"name":"up regulation of cilium assembly","type":"exact"},{"name":"up-regulation of cilium assembly","type":"exact"},{"name":"upregulation of cilium assembly","type":"exact"}],"termid":"GO:0045724"}


id: PBO:0082293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Argininosuccinate lyase; catalyzes the final step in the arginine biosynthesis pathway","termid":"PBO:0082293"}


id: PBO:0064875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 35","termid":"PBO:0064875"}


id: GO:0097120
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a receptor is transported to, and/or maintained at the synapse, the junction between a nerve fiber of one neuron and another neuron or muscle fiber or glial cell.","definition_xrefs":["GOC:sjp","PMID:21525273","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization","termid":"GO:0051179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"receptor localization to synapse","synonyms":[{"name":"receptor localisation to synapse","type":"exact"}],"termid":"GO:0097120"}


id: PBO:0072516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 45","termid":"PBO:0072516"}


id: FYPO:0000780
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription occurs to a greater extent than normal. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"},{"relation_name":"is_a","term_name":"abnormal transcription during vegetative growth","termid":"FYPO:0004064"},{"relation_name":"is_a","term_name":"abnormal regulation of transcription during vegetative growth","termid":"FYPO:0004527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0000002","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription during vegetative growth","synonyms":[{"name":"increased transcription during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000780"}


id: MONDO:0030281
data:
  {"annotated_genes":["SJAG_03379"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88510],"is_not":false,"summary":null,"term":"MONDO:0030281"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita","termid":"MONDO:0015168"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03379":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1786758","UMLS:C5543431","DOID:0070336","OMIM:619334"],"synonyms":[{"name":"AMC6","type":"exact"},{"name":"arthrogryposis multiplex congenita 6","type":"exact"}],"termid":"MONDO:0030281","terms_by_termid":{"MONDO:0030281":null},"xrefs":{"Monarch":{"xref_id":"0030281"}}}


id: GO:0034088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the association between sister chromatids of a replicated chromosome is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a mitotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of sister chromatid cohesion","termid":"GO:0034086"},{"relation_name":"part_of","term_name":"mitotic sister chromatid cohesion","termid":"GO:0007064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"maintenance of mitotic sister chromatid cohesion","synonyms":[{"name":"mitotic cohesion stability","type":"related"}],"termid":"GO:0034088"}


id: GO:0060664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells of the submandibular salivary gland, resulting in the expansion of a cell population and the shaping of the gland.","definition_xrefs":["PMID:17336109","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"},{"relation_name":"part_of","term_name":"salivary gland morphogenesis","termid":"GO:0007435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in salivary gland morphogenesis","termid":"GO:0060664"}


id: PBO:0086057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function that associates with ribosomes; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and bud; not an essential gene; protein abundance increases in response to DNA replication stress; YMR295C has a paralog, YGR273C, that arose from the whole genome duplication","termid":"PBO:0086057"}


id: PBO:0058017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3943","termid":"PBO:0058017"}


id: MONDO:0006677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retrograde bile flow. Reflux of bile can be from the duodenum to the stomach (duodenogastric reflux); to the esophagus (gastroesophageal reflux); or to the pancreas.","definition_xrefs":["MESH:D001655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary tract disorder","termid":"MONDO:0004868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile reflux","secondary_identifiers":["MEDGEN:2243","DOID:12237","UMLS:C0005403","EFO:1000838"],"termid":"MONDO:0006677","xrefs":{"Monarch":{"xref_id":"0006677"}}}


id: MONDO:1011584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal nocturnal hemoglobinuria that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal nocturnal hemoglobinuria, non-human animal","termid":"MONDO:1011413"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal nocturnal hemoglobinuria, Rhesus monkey","secondary_identifiers":["OMIA:002372-9544"],"termid":"MONDO:1011584","xrefs":{"Monarch":{"xref_id":"1011584"}}}


id: GO:0160267
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H1 monomethylated at lysine 26.","definition_xrefs":["PMID:17540172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H1 reader activity","termid":"GO:0140128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0030674","GO:0140566","GO:0060090","GO:0003674"],"is_obsolete":false,"name":"histone H1K26me1 reader activity","termid":"GO:0160267"}


id: PBO:0027520
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cell_cycle_phase","termid":"PBO:0027520"}


id: PBO:0070956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a pseudogene 11","termid":"PBO:0070956"}


id: PBO:0034027
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_curator_email","termid":"PBO:0034027"}


id: PBO:0040168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase (glutamine-hydrolyzing)","termid":"PBO:0040168"}


id: GO:0043043
data:
  {"annotated_genes":["SJAG_04031","SJAG_04032","SJAG_03494","SJAG_01351","SJAG_02599","SJAG_00988","SJAG_00469","SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59860,96121,107422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031169"},{"annotations":[80689,58192,110470,79386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006750"},{"annotations":[96067],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptides, compounds of 2 or more (but usually less than 100) amino acids where the alpha carboxyl group of one is bound to the alpha amino group of another. This may include the translation of a precursor protein and its subsequent processing into a functional peptide.","definition_xrefs":["GOC:dph","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide metabolic process","termid":"GO:0006518"},{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00469":null,"SJAG_00792":null,"SJAG_00988":null,"SJAG_01351":null,"SJAG_02599":null,"SJAG_03494":null,"SJAG_04031":null,"SJAG_04032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptide biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9037628"],"synonyms":[{"name":"peptide anabolism","type":"exact"},{"name":"peptide biosynthesis","type":"exact"},{"name":"peptide formation","type":"exact"},{"name":"peptide synthesis","type":"exact"}],"termid":"GO:0043043","terms_by_termid":{"GO:0006750":null,"GO:0031169":null,"GO:1905569":null}}


id: GO:1902544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA N-glycosylase activity.","definition_xrefs":["GOC:rph","PMID:15518571","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA N-glycosylase activity (obsolete GO:1902544)","synonyms":[{"name":"regulation of DNA glycosylase activity","type":"exact"},{"name":"regulation of endonuclease VIII activity","type":"related"}],"termid":"GO:1902544"}


id: GO:0036341
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of hardening of a chitin-based cuticle by protein cross-linking, and the incorporation of phenolic precursors. This mechanism of cuticle hardening occurs in insects and is usually accompanied by darkening of the cuticle.","definition_xrefs":["GOC:bf","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle sclerotization by protein cross-linking","synonyms":[{"name":"chitin-based cuticle sclerotization by protein cross-linking and cuticle tanning","type":"narrow"}],"termid":"GO:0036341"}


id: GO:0008439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Increases the activity of the enzyme monophenol monooxygenase.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete monophenol monooxygenase activator activity (obsolete GO:0008439)","synonyms":[{"name":"monophenol monooxygenase activator activity","type":"exact"},{"name":"prophenol oxidase activator","type":"related"}],"termid":"GO:0008439"}


id: SO:0000196
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence of the five_prime_coding_exon that codes for protein.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coding_region_of_exon","termid":"SO:0001215"},{"relation_name":"part_of","term_name":"five_prime_coding_exon","termid":"SO:0000200"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_coding_exon_coding_region","synonyms":[{"name":"five prime exon coding region","type":"exact"}],"termid":"SO:0000196"}


id: PBO:0049752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxycarboxylic acid receptor 2","termid":"PBO:0049752"}


id: MONDO:0005493
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anoxic encephalopathy resulting from acute CO intoxication, developing within 2-6 weeks of the poisoning event","definition_xrefs":["EFO:0005534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic encephalopathy","termid":"MONDO:0005527"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"carbon monoxide poisoning","termid":"MONDO:0800373"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbon monoxide-induced delayed encephalopathy","synonyms":[{"name":"delayed encephalopathy after acute carbon monoxide poisoning","type":"exact"},{"name":"delayed encephalopathy in patients with acute carbon monoxide poisoning","type":"exact"}],"termid":"MONDO:0005493","xrefs":{"Monarch":{"xref_id":"0005493"}}}


id: PBO:0066400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 3 alpha","termid":"PBO:0066400"}


id: PBO:0013077
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement E. coli hisB","termid":"PBO:0013077"}


id: PBO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aberrent Microtubules when Overexpressed","termid":"PBO:0004317"}


id: GO:0140199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of an adenylate cyclase-activating adrenergic receptor signaling pathway involved in some heart process.","definition_xrefs":["GOC:BHF","GOC:rph","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway","termid":"GO:0071878"},{"relation_name":"negatively_regulates","term_name":"adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0086023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway involved in heart process","termid":"GO:0140199"}


id: PBO:0079874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF3A pseudogene 1","termid":"PBO:0079874"}


id: GO:0030317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, self-propelled movement of a cilium (aka flagellum) that contributes to the movement of a flagellated sperm.","definition_xrefs":["GO_REF:0000060","GOC:krc","GOC:cilia","GOC:TermGenie","PMID:26680031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cilium-dependent cell motility","termid":"GO:0060285"},{"relation_name":"is_a","term_name":"cilium movement involved in cell motility","termid":"GO:0060294"},{"relation_name":"is_a","term_name":"sperm motility","termid":"GO:0097722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flagellated sperm motility","secondary_identifiers":["Wikipedia:Sperm_motility","GO:0097724","GO:1905419"],"synonyms":[{"name":"flagellated sperm movement","type":"exact"},{"name":"sperm flagellum movement","type":"exact"},{"name":"sperm flagellum movement involved in flagellated sperm motility","type":"exact"},{"name":"sperm flagellum movement involved in flagellated sperm movement","type":"exact"},{"name":"sperm motility","type":"broad"},{"name":"sperm movement","type":"broad"}],"termid":"GO:0030317"}


id: PBO:0087382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol deacetylase; component of the sterol acetylation/deacetylation cycle along with Atf2p; active both in the endoplasmic reticulum (ER) and in lipid droplets; integral membrane protein with active site in the ER lumen; green fluorescent protein (GFP)-fusion protein localizes to the ER","termid":"PBO:0087382"}


id: GO:1904616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin binding.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:8621557","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin binding (obsolete GO:1904616)","synonyms":[{"name":"regulation of membrane associated actin binding","type":"narrow"}],"termid":"GO:1904616"}


id: PBO:0054550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1950","termid":"PBO:0054550"}


id: PBO:0056572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK regulated corepressor interacting protein 1","termid":"PBO:0056572"}


id: PBO:0065904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab acceptor 1","termid":"PBO:0065904"}


id: GO:0060705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features that characterize the neurons of the salivary gland.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron differentiation","termid":"GO:0030182"},{"relation_name":"is_a","term_name":"cell differentiation involved in salivary gland development","termid":"GO:0060689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron differentiation involved in salivary gland development","termid":"GO:0060705"}


id: GO:0002178
data:
  {"annotated_genes":["SJAG_01349","SJAG_01857","SJAG_04550","SJAG_02706","SJAG_02305","SJAG_04178","SJAG_00880","SJAG_04451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[112193,76822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031211"},{"annotations":[98910,80856,95558,107561,75046,108017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017059"}]},"cv_name":"cellular_component","definition":"A protein complex with palmitoyltransferase activity.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00880":null,"SJAG_01349":null,"SJAG_01857":null,"SJAG_02305":null,"SJAG_02706":null,"SJAG_04178":null,"SJAG_04451":null,"SJAG_04550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"palmitoyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0002178","terms_by_termid":{"GO:0017059":null,"GO:0031211":null}}


id: FYPO:0000022
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell forms a mating projection with a longer tip than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal shmoo morphology","termid":"FYPO:0000357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000301"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"shmoo with long tip","synonyms":[{"name":"cell morphology, shmoos with long tips","type":"exact"},{"name":"conjugation tube with long tip","type":"exact"},{"name":"long, straight shmoos","type":"exact"},{"name":"mating projection with long tip","type":"exact"},{"name":"straight and long shmoos","type":"exact"}],"termid":"FYPO:0000022"}


id: MONDO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anencephaly","termid":"MONDO:0000819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"anencephaly 2","secondary_identifiers":["UMLS:C5561945","MEDGEN:1794155","OMIM:619452"],"synonyms":[{"name":"ANPH2","type":"exact"},{"name":"anencephaly 2","type":"exact"}],"termid":"MONDO:0030338","xrefs":{"Monarch":{"xref_id":"0030338"}}}


id: PBO:0066137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retina and anterior neural fold homeobox 2","termid":"PBO:0066137"}


id: GO:0044636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the regulation of complement activation via the classical pathway of the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, classical pathway in another organism (obsolete GO:0044636)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, classical pathway in other organism","type":"exact"}],"termid":"GO:0044636"}


id: GO:0060634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of 4,6-pyruvylated galactose residue biosynthetic process, the chemical reactions and pathways resulting in the formation of the pyruvylated galactose residue 4-6-O-[(R)(1-carboxyethylidine)]-Gal-beta-(1->3)-. The galactose residue is part of a larger polysaccharide chain.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide biosynthetic process","termid":"GO:0032885"},{"relation_name":"regulates","term_name":"4,6-pyruvylated galactose residue biosynthetic process","termid":"GO:0051072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of 4,6-pyruvylated galactose residue biosynthetic process","termid":"GO:0060634"}


id: GO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O2 + H+ + palmitate = CO2 + 3 H2O + pentadecanal.","definition_xrefs":["EC:1.11.1.3","RHEA:23960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxidase activity","termid":"GO:0004601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fatty acid peroxidase activity","secondary_identifiers":["KEGG_REACTION:R01703","MetaCyc:FATTY-ACID-PEROXIDASE-RXN"],"synonyms":[{"name":"fatty-acid peroxidase activity","type":"exact"},{"name":"hexadecanoate:hydrogen-peroxide oxidoreductase activity","type":"related"},{"name":"long chain fatty acid peroxidase activity","type":"related"}],"termid":"GO:0047888"}


id: PR:Q92367
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1652.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid permease 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1652.02","synonyms":[{"name":"Spom972h-SPBC1652.02","type":"exact"}],"termid":"PR:Q92367"}


id: PBO:0029703
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-RNA_absent_from_cell_during_nitrogen_starvation","termid":"PBO:0029703"}


id: PBO:0050699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 12B","termid":"PBO:0050699"}


id: PBO:0039073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase 1","termid":"PBO:0039073"}


id: PBO:0044660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DCUN1D2 antisense RNA","termid":"PBO:0044660"}


id: MONDO:0017369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoinflammatory syndrome with immune deficiency (obsolete MONDO:0017369)","secondary_identifiers":["Orphanet:290839"],"termid":"MONDO:0017369","xrefs":{"Monarch":{"xref_id":"0017369"}}}


id: PBO:0074703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 71C","termid":"PBO:0074703"}


id: PBO:0055602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3040","termid":"PBO:0055602"}


id: GO:0141068
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment of epigenetic modifications (imprints) in autosomal (non-sexual) chromosomes during gametogenesis, and propagation of these imprints during the organism's life. Genomic imprinting leads to an asymmetry between the maternal and paternal alleles and differential expression of the corresponding alleles. This can happen through heterochromatin formation or differential chromatin loop formation.","definition_xrefs":["PMID:31782494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic imprinting","termid":"GO:0071514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006325","GO:0010467"],"is_obsolete":false,"name":"autosome genomic imprinting","synonyms":[{"name":"autosomal genomic imprinting","type":"exact"},{"name":"genomic imprinting of autosomal genes","type":"exact"}],"termid":"GO:0141068"}


id: PBO:0080569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDFY3 antisense RNA 1","termid":"PBO:0080569"}


id: PBO:0057906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3609","termid":"PBO:0057906"}


id: GO:1901334
data:
  {"annotated_genes":["SJAG_00265"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070485"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving lactone.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00265":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lactone metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"lactone metabolism","type":"exact"}],"termid":"GO:1901334","terms_by_termid":{"GO:0070485":null}}


id: PR:Q86ZU7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox1102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q86ZU7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rsm22-cox11 tandem protein 2, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19B12.13","synonyms":[{"name":"Spom972h-cox1102","type":"exact"}],"termid":"PR:Q86ZU7"}


id: PBO:0038568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein family member 2","termid":"PBO:0038568"}


id: GO:1903306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of regulated secretory pathway.","definition_xrefs":["GOC:pad","GOC:PARL","GO_REF:0000058","PMID:12526776","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of regulated secretory pathway","termid":"GO:1903305"},{"relation_name":"negatively_regulates","term_name":"regulated exocytosis","termid":"GO:0045055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of regulated secretory pathway","synonyms":[{"name":"down regulation of regulated secretory pathway","type":"exact"},{"name":"down-regulation of regulated secretory pathway","type":"exact"},{"name":"downregulation of regulated secretory pathway","type":"exact"},{"name":"inhibition of regulated secretory pathway","type":"narrow"}],"termid":"GO:1903306"}


id: PBO:0069254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 509, pseudogene","termid":"PBO:0069254"}


id: GO:1901022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-hydroxyphenylacetate.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"4-hydroxyphenylacetate metabolic process","synonyms":[{"name":"4-hydroxyphenylacetate metabolism","type":"exact"}],"termid":"GO:1901022"}


id: GO:0007453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures derived from the clypeo-labral disc are generated and organized. This includes the transformation of a clypeo-labal imaginal disc from a monolayered epithelium in the larvae of holometabolous insects into recognizable adult structures including the labrum, anterior and posterior cibarial plates, fish trap bristles, epistomal sclerite and clypeus.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc morphogenesis","termid":"GO:0007560"},{"relation_name":"part_of","term_name":"clypeo-labral disc development","termid":"GO:0035213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clypeo-labral disc morphogenesis","synonyms":[{"name":"clypeo-labral disc metamorphosis","type":"exact"},{"name":"morphogenesis of structures derived from the clypeo-labral disc","type":"exact"}],"termid":"GO:0007453"}


id: MONDO:0013511
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyanosis, transient neonatal","secondary_identifiers":["OMIM:613977","UMLS:C3151421","MEDGEN:462771"],"synonyms":[{"name":"TNCY","type":"related"},{"name":"cyanosis, transient neonatal","type":"exact"}],"termid":"MONDO:0013511","xrefs":{"Monarch":{"xref_id":"0013511"}}}


id: PBO:0085371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphotyrosine-specific protein phosphatase; major role in the pheromone adaptive response through dephosphorylation of the Fus3p MAPK with a minor role by Ptp2p and Msg5p; minor role in the inactivation of Hog1p MAPK during osmolarity sensing with major role by Ptp2p; dephosphorylates and regulates the localization of Hog1p; minor role in the cell wall integrity pathway through tyrosine dephosphorylation of the MAPK Slt2p while Ptp2p plays a major role; localizes to the cytoplasm","termid":"PBO:0085371"}


id: PBO:0059599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 11","termid":"PBO:0059599"}


id: GO:0046539
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine(1+) + histamine = N(tau)-methylhistamine + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["EC:2.1.1.8","RHEA:19301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"histamine N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02155","MetaCyc:HISTAMINE-N-METHYLTRANSFERASE-RXN","Reactome:R-HSA-175993"],"synonyms":[{"name":"S-adenosyl-L-methionine:histamine N-tele-methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine-histamine N-methyltransferase activity","type":"related"},{"name":"histamine 1-methyltransferase activity","type":"related"},{"name":"histamine methyltransferase activity","type":"related"},{"name":"histamine-methylating enzyme","type":"related"},{"name":"imidazolemethyltransferase activity","type":"related"}],"termid":"GO:0046539"}


id: GO:0120216
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cartilage extracellular matrix complex that mediates interactions between major components of the extracellular matrix such as collagens and proteoglycans and contributes to their fibrillar network. Exists as an obligate homotrimer.","definition_xrefs":["PMID:15075323","PMID:9699631","GOC:bhm","PMID:10367731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"extracellular matrix","termid":"GO:0031012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"matrilin complex","synonyms":[{"name":"matrilin family complex","type":"related"},{"name":"matrilin-1 complex","type":"narrow"},{"name":"matrilin-2 complex","type":"narrow"},{"name":"matrilin-3 complex","type":"narrow"},{"name":"matrilin-4 complex","type":"narrow"}],"termid":"GO:0120216"}


id: PBO:0076143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLG2 pseudogene 2","termid":"PBO:0076143"}


id: PBO:0031446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_double-strand_break_repair_during_vegetative_growth","termid":"PBO:0031446"}


id: PBO:0120012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRABD2B antisense RNA 1","termid":"PBO:0120012"}


id: MONDO:0012197
data:
  {"annotated_genes":["SJAG_04491","SJAG_05979","SJAG_00640","SJAG_00487"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87297,87298,89292,89293],"is_not":false,"summary":null,"term":"MONDO:0012197"}]},"cv_name":"mondo","definition":"Aplastic anemia without a known cause.","definition_xrefs":["NCIT:C61230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired aplastic anemia","termid":"MONDO:0015610"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00487":null,"SJAG_00640":null,"SJAG_04491":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"idiopathic aplastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C538494","GARD:5836","NANDO:2201276","OMIM:609135","ICD10CM:D61.0","SCTID:191256002","ICD10CM:D61.3","UMLS:C0348890","MEDGEN:87595","NANDO:1200296","icd11.foundation:1615519452","Orphanet:88"],"synonyms":[{"name":"anaemia aplastic","type":"related"},{"name":"anemia aplastic","type":"related"},{"name":"aplastic Anemia, susceptibility to","type":"related"},{"name":"aplastic anaemia","type":"related"},{"name":"aplastic anaemia idiopathic","type":"related"},{"name":"aplastic anemia","type":"related"},{"name":"aplastic anemia idiopathic","type":"related"},{"name":"idiopathic aplastic aplasia","type":"exact"},{"name":"idiopathic bone marrow failure","type":"exact"},{"name":"secondary aplastic anaemia","type":"related"},{"name":"secondary aplastic anemia","type":"related"}],"termid":"MONDO:0012197","terms_by_termid":{"MONDO:0012197":null},"xrefs":{"Monarch":{"xref_id":"0012197"}}}


id: GO:0016610
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An enzyme complex composed of two proteins, dinitrogenase and nitrogenase reductase; dinitrogenase is tetrameric with an alpha2-beta2 structure and nitrogenase reductase is a homodimer, and both are associated with metal ions, which differ between species. Both proteins are required for the enzyme activity of the complex, the formation of oxidized ferredoxin and ammonia from reduced ferredoxin and nitrogen.","definition_xrefs":["PMID:10852721"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nitrogenase complex","termid":"GO:0016610"}


id: GO:0007448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the imaginal disc. Imaginal discs are epithelial infoldings in the larvae of holometabolous insects that rapidly develop into adult appendages during metamorphosis from larval to adult form.","definition_xrefs":["ISBN:0879694238","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"anterior/posterior pattern specification","termid":"GO:0009952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"}


id: GO:0002892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of type II hypersensitivity.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hypersensitivity","termid":"GO:0002883"},{"relation_name":"is_a","term_name":"regulation of myeloid leukocyte mediated immunity","termid":"GO:0002886"},{"relation_name":"is_a","term_name":"regulation of immunoglobulin mediated immune response","termid":"GO:0002889"},{"relation_name":"regulates","term_name":"type II hypersensitivity","termid":"GO:0002445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type II hypersensitivity","termid":"GO:0002892"}


id: FYPO:0006316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cells contain more spindle pole bodies (SPBs) than normal during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:29259000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole bodies present in increased numbers during meiosis","termid":"FYPO:0004609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"spindle pole bodies present in increased numbers during meiosis II","synonyms":[{"name":"SPBs present in increased numbers during meiosis II","type":"exact"},{"name":"excess meiotic spindle pole bodies present during meiosis II","type":"exact"},{"name":"excess spindle pole bodies present during meiosis II","type":"exact"},{"name":"extra spindle pole bodies present during meiosis II","type":"exact"},{"name":"spindle pole bodies present in greater numbers during meiosis II","type":"exact"},{"name":"spindle pole bodies present in increased numbers during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006316"}


id: PBO:0027631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_acetylation_at_subtelomere","termid":"PBO:0027631"}


id: PBO:0048325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 36","termid":"PBO:0048325"}


id: PBO:0028447
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_substrate_specificity,_glutathione_synthetase_to_homoglutathione_synthetase_activity","termid":"PBO:0028447"}


id: PBO:0064901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 catalytic subunit alpha","termid":"PBO:0064901"}


id: GO:0071922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a process in which a cohesin complex is transported to, or maintained at, a part of a chromosome that is organized into chromatin.","definition_xrefs":["GOC:mah","GOC:lb","PMID:17113138"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cohesin loading (obsolete GO:0071922)","synonyms":[{"name":"regulation of cohesin association with chromatin","type":"exact"},{"name":"regulation of cohesin localisation to chromatin","type":"exact"},{"name":"regulation of cohesin localization to chromatin","type":"exact"}],"termid":"GO:0071922"}


id: GO:0018894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dibenzo-p-dioxin, a substance composed of two benzene rings linked by two ether bonds. Dibenzo-p-dioxins are generated as by-products in the manufacturing of herbicides, insecticides, fungicides, paper pulp bleaching, and in incineration, and can accumulate in milk and throughout the food chain, creating significant health concern.","definition_xrefs":["UM-BBD_pathwayID:dpd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dibenzo-p-dioxin metabolic process","synonyms":[{"name":"dibenzo-p-dioxin metabolism","type":"exact"},{"name":"oxanthrene metabolic process","type":"exact"},{"name":"oxanthrene metabolism","type":"exact"},{"name":"phenodioxin metabolic process","type":"exact"},{"name":"phenodioxin metabolism","type":"exact"}],"termid":"GO:0018894"}


id: GO:0030932
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An ADPG pyrophosphorylase complex found in the amyloplast.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid ADPG pyrophosphorylase complex","termid":"GO:0031009"},{"relation_name":"part_of","term_name":"amyloplast","termid":"GO:0009501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"amyloplast ADPG pyrophosphorylase complex","termid":"GO:0030932"}


id: GO:0098672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts the CRISPR-cas system of its host. Bacteria and archaea use CRISPR-Cas adaptive immune systems to defend themselves from infection by bacteriophages (phages), and phages have various mechanisms to counter the CRISPR-cas system.","definition_xrefs":["PMID:23446421","PMID:23242138","PMID:26416740","PMID:28749735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host defense response","termid":"GO:0052031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host CRISPR-cas system","secondary_identifiers":["VZ:3962"],"synonyms":[{"name":"CRISPR-cas system evasion by virus","type":"exact"},{"name":"anti-CRISPR","type":"broad"},{"name":"evasion by virus of CRISPR-cas system","type":"related"},{"name":"inhibition of host CRISPR-cas system by virus","type":"related"},{"name":"suppression of host CRISPR-cas system","type":"exact"}],"termid":"GO:0098672"}


id: MONDO:0021285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the urethra.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in situ carcinoma","termid":"MONDO:0004647"},{"relation_name":"is_a","term_name":"carcinoma of urethra","termid":"MONDO:0021327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma in situ of urethra","secondary_identifiers":["NCIT:C4531","SCTID:92784007","MEDGEN:1661236","UMLS:C4721449","ICD9:233.9"],"synonyms":[{"name":"carcinoma in situ of the urethra","type":"exact"},{"name":"carcinoma in situ of urethra","type":"exact"},{"name":"stage 0 urethra carcinoma","type":"exact"},{"name":"stage 0is carcinoma of the urethra","type":"exact"},{"name":"stage 0is carcinoma of urethra","type":"exact"},{"name":"stage 0is urethra carcinoma","type":"exact"},{"name":"stage 0is urethral cancer","type":"exact"},{"name":"stage 0is urethral cancer aJCC v7","type":"exact"},{"name":"stage 0is urethral carcinoma","type":"exact"},{"name":"urethra carcinoma in situ","type":"exact"},{"name":"urethra in situ carcinoma","type":"exact"},{"name":"urethral carcinoma in situ","type":"exact"}],"termid":"MONDO:0021285","xrefs":{"Monarch":{"xref_id":"0021285"}}}


id: GO:1990411
data:
  {"annotated_genes":["SJAG_03856"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72888],"is_not":false,"summary":null,"term":"GO:1990411"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: hercynylcysteine sulfoxide + 2H+ = ergothioneine + pyruvate + ammonium.","definition_xrefs":["PMID:24828577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03856":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hercynylcysteine sulfoxide lyase activity (ergothioneine-forming)","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:RXN-14428","RHEA:42688"],"termid":"GO:1990411","terms_by_termid":{"GO:1990411":null}}


id: GO:0061567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of introducing a phosphate group into dCMP, deoxycytidine monophosphate, to produce dCDP. Addition of two phosphate groups produces dCTP.","definition_xrefs":["GOC:dph","PMID:23416111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate phosphorylation","termid":"GO:0046940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dCMP phosphorylation","termid":"GO:0061567"}


id: GO:0036465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trafficking of synaptic vesicles from the pre-synaptic membrane so the vesicle can dock and prime for another round of exocytosis and neurotransmitter release. Recycling occurs after synaptic vesicle exocytosis, and is necessary to replenish presynaptic vesicle pools, sustain transmitter release and preserve the structural integrity of the presynaptic membrane. Recycling can occur following transient fusion with the presynaptic membrane (kiss and run), or via endocytosis of presynaptic membrane.","definition_xrefs":["GOC:bf","PMID:15217342","GOC:PARL","PMID:22026965","GOC:pad","PMID:23245563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"part_of","term_name":"synaptic vesicle cycle","termid":"GO:0099504"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"synaptic vesicle recycling","synonyms":[{"name":"kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"kiss-and-stay synaptic vesicle recycling","type":"narrow"}],"termid":"GO:0036465"}


id: PR:P87139
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC57A7.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger protein C57A7.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A7.09","synonyms":[{"name":"Spom972h-SPAC57A7.09","type":"exact"}],"termid":"PR:P87139"}


id: PBO:0036386
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Saitoella complicata DPS1","termid":"PBO:0036386"}


id: MONDO:0859275
data:
  {"annotated_genes":["SJAG_04782"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87843],"is_not":false,"summary":null,"term":"MONDO:0859275"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04782":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with spasticity, seizures, and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5774197","MEDGEN:1823970","OMIM:620001"],"termid":"MONDO:0859275","terms_by_termid":{"MONDO:0859275":null},"xrefs":{"Monarch":{"xref_id":"0859275"}}}


id: PBO:0012842
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Renal cell cancer","termid":"PBO:0012842"}


id: GO:0060179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific behavior of a male organism that is associated with reproduction.","definition_xrefs":["GOC:tb","GOC:dph","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mating behavior","termid":"GO:0007617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male mating behavior","termid":"GO:0060179"}


id: PBO:0034296
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_endoparasite","termid":"PBO:0034296"}


id: PBO:0113374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative AMP hydrolase; secreted protein proposed to function as an adenosine monophosphatase in NAD+ degradation, via nucleoside salvage pathway that converts NAD+ to AMP and adenosine; overexpression results in adenosine accumulation and reduced levels of NAD+, deletion results in increased NAD+ and NADH; targeted to vacuole via Vps10p-dependent endosomal vacuolar protein sorting pathway; similar to human NT5E/CD73 gene involved in cancer progression","termid":"PBO:0113374"}


id: GO:0000299
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Integral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; require detergents, such as Triton X-100, to be released from membranes.","definition_xrefs":["PMID:10512869"],"gene_count":0,"genotype_count":0,"name":"obsolete integral to membrane of membrane fraction (obsolete GO:0000299)","synonyms":[{"name":"integral to membrane of membrane fraction","type":"exact"}],"termid":"GO:0000299"}


id: GO:0005190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete seminal fluid protein (obsolete GO:0005190)","synonyms":[{"name":"seminal fluid protein","type":"exact"}],"termid":"GO:0005190"}


id: PBO:0049747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit theta 1","termid":"PBO:0049747"}


id: MONDO:0010032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sjogren-Larsson-like ichthyosis without CNS or eye involvement","secondary_identifiers":["MESH:C536668","OMIM:270220","UMLS:C1849195","MEDGEN:336532"],"synonyms":[{"name":"Sjogren-Larsson-like ichthyosis without CNS or eye involvement","type":"exact"},{"name":"Sjogren-Larsson-like syndrome","type":"related"},{"name":"ichthyosis, Sjogren-Larsson-like, without CNS or eye involvement","type":"related"}],"termid":"MONDO:0010032","xrefs":{"Monarch":{"xref_id":"0010032"}}}


id: GO:0070397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["PMID:14665680","GOC:add","PMID:16020688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid metabolic process","termid":"GO:0046374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wall teichoic acid metabolic process","synonyms":[{"name":"WTA metabolic process","type":"exact"},{"name":"wall teichoic acid metabolism","type":"exact"}],"termid":"GO:0070397"}


id: PBO:0062840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oligosaccharyltransferase complex subunit pseudogene 6","termid":"PBO:0062840"}


id: PBO:0074284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLIT3 antisense RNA 1","termid":"PBO:0074284"}


id: GO:0010690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of RNA from ribosomal protein genes by RNA polymerase II, originating at an RNA polymerase II promoter, as a result of a disturbance in organismal or cellular homeostasis.","definition_xrefs":["GOC:dph","GOC:tb","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ribosomal protein gene transcription by RNA polymerase II","termid":"GO:0010688"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"negative regulation of ribosomal protein gene transcription from RNA polymerase II promoter in response to stress","termid":"GO:0010690"}


id: PBO:0059740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 14","termid":"PBO:0059740"}


id: MONDO:0002283
data:
  {"annotated_genes":["SJAG_03866","SJAG_00115","SJAG_04757","SJAG_05277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88931,88930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011706"},{"annotations":[88916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010476"},{"annotations":[87613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014290"}]},"cv_name":"mondo","definition":"A nonspecific term referring both to the pathologic finding of swelling of distal portions of axons in the brain and to disorders which feature this finding. Neuroaxonal dystrophy is seen in various genetic diseases, vitamin deficiencies, and aging. Infantile neuroaxonal dystrophy is an autosomal recessive disease characterized by arrested psychomotor development at 6 months to 2 years of age, ataxia, brain stem dysfunction, and quadriparesis. Juvenile and adult forms also occur. Pathologic findings include brain atrophy and widespread accumulation of axonal spheroids throughout the neuroaxis, peripheral nerves, and dental pulp. (From Davis & Robertson, Textbook of Neuropathology, 2nd ed, p927)","definition_xrefs":["MESH:D019150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00115":null,"SJAG_03866":null,"SJAG_04757":null,"SJAG_05277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"neuroaxonal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C161542","SCTID:230365004","UMLS:C0338473","DOID:2367","MEDGEN:90924"],"termid":"MONDO:0002283","terms_by_termid":{"MONDO:0010476":null,"MONDO:0011706":null,"MONDO:0014290":null},"xrefs":{"Monarch":{"xref_id":"0002283"}}}


id: FYPO:0006487
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular phosphoinositide level","termid":"FYPO:0001286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"increased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"increased cellular PI(3,4)P2 level","type":"exact"},{"name":"increased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"increased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006487"}


id: PBO:0062186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily N member 5","termid":"PBO:0062186"}


id: GO:1901358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-D-galactofuranose.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galactose biosynthetic process","termid":"GO:0046369"},{"relation_name":"is_a","term_name":"beta-D-galactofuranose metabolic process","termid":"GO:1901356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"beta-D-galactofuranose biosynthetic process","synonyms":[{"name":"beta-D-galactofuranose anabolism","type":"exact"},{"name":"beta-D-galactofuranose biosynthesis","type":"exact"},{"name":"beta-D-galactofuranose formation","type":"exact"},{"name":"beta-D-galactofuranose synthesis","type":"exact"}],"termid":"GO:1901358"}


id: PBO:0120407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTDSP2 antisense RNA 1","termid":"PBO:0120407"}


id: PBO:0030131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_iron_level","termid":"PBO:0030131"}


id: FYPO:0004959
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a specific substance measured in the mitochondrion is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal level of substance in mitochondrion","synonyms":[{"name":"normal level of substance in mitochondria","type":"exact"},{"name":"normal level of substance in mitochondrion during mitotic cell cycle","type":"related"},{"name":"normal level of substance in mitochondrion during vegetative growth","type":"exact"},{"name":"normal mitochondrial level of substance","type":"exact"}],"termid":"FYPO:0004959"}


id: PBO:0082275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Anillin-like protein involved in bud-site selection; required for the axial budding pattern; required for the formation and disassembly of the double septin ring structure, and generally for septin organization; functions as a platform linking the cytokinesis tag septins to the axial landmark through its multiple domains; in vivo substrate of Cdc28p/Clb2p","termid":"PBO:0082275"}


id: FYPO:0009005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in mitotic interphase in which microtubule-based movement oscillations occur at a faster speed than normal in a daughter cell that inherits no mitochondria.","definition_xrefs":["PMID:36633091","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule-based movement during vegetative growth","termid":"FYPO:0005461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased interphase nuclear movement velocity in daughter cell without mitochondria","synonyms":[{"name":"increased interphase nuclear oscillation velocity in daughter cell without mitochondria","type":"exact"}],"termid":"FYPO:0009005"}


id: MONDO:0008109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular cicatricial pemphigoid (OCP) is a form of mucous membrane pemphigoid (a group of rare, chronic autoimmune disorders) that affects the eyes. In the early stages, people with OCPgenerally experience chronic or relapsing conjunctivitis that is often characterized by tearing, irritation, burning, and/or mucus drainage. If left untreated, OCP can progress to severe conjunctiva scarring and vision loss. Involvement of other mucosal sites and the skin may also occur in OCP. The exact underlying cause is currently unknown. The treatment of OCP aims to slow disease progression and prevent complications. This usually involves long-term use of medications called immunomodulators which help regulate or normalize the immune system.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"mucous membrane pemphigoid","termid":"MONDO:0018746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"ocular cicatricial pemphigoid","secondary_identifiers":["MEDGEN:266181","GARD:8759","NCIT:C84939","OMIM:164185","Orphanet:99922","icd11.foundation:953963439","ICD10EXP:L12+","SCTID:314757003","MedDRA:10067776","ICD10EXP:H13.3*","SCTID:34250006","UMLS:C1282359","EFO:0008610"],"synonyms":[{"name":"OCP","type":"related"},{"name":"cicatricial pemphigoid, ocular","type":"related"},{"name":"ocular cicatricial pemphigoid","type":"exact"},{"name":"ocular pemphigoid","type":"exact"},{"name":"pemphigoid, ocular cicatricial","type":"related"}],"termid":"MONDO:0008109","xrefs":{"Monarch":{"xref_id":"0008109"}}}


id: PBO:0078200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 6-2","termid":"PBO:0078200"}


id: PBO:0065446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase 3 pseudogene 1","termid":"PBO:0065446"}


id: PBO:0076346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 13","termid":"PBO:0076346"}


id: GO:0120503
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an (omega-1)-ethyl medium-chain fatty acid + O2 + reduced [NADPH-hemoprotein reductase] = an (omega-1)-hydroxy-medium-chain fatty acid + H+ + H2O + oxidized [NADPH-hemoprotein reductase. A medium-chain fatty acid has an aliphatic tail containing 6 to 12 carbons.","definition_xrefs":["PMID:35934685"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-1 hydroxylase activity","termid":"GO:0120502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"medium-chain fatty acid omega-1 hydroxylase activity","termid":"GO:0120503"}


id: MONDO:0013705
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0037792"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 19","secondary_identifiers":["OMIM:614343","MEDGEN:482171","UMLS:C3280541","GARD:22558"],"synonyms":[{"name":"MRT19","type":"exact"},{"name":"intellectual disability, autosomal recessive 19","type":"exact"},{"name":"mental retardation, autosomal recessive 19","type":"related"}],"termid":"MONDO:0013705","xrefs":{"Monarch":{"xref_id":"0013705"}}}


id: GO:0045155
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons from the CoQH2-cytochrome c reductase complex and the cytochrome c oxidase complex.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter, transferring electrons from CoQH2-cytochrome c reductase complex and cytochrome c oxidase complex activity (obsolete GO:0045155)","synonyms":[{"name":"cytochrome","type":"related"},{"name":"cytochrome c","type":"narrow"}],"termid":"GO:0045155"}


id: PR:Q10360
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrn10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I-specific transcription initiation factor rrn10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.08","synonyms":[{"name":"Spom972h-rrn10","type":"exact"}],"termid":"PR:Q10360"}


id: MONDO:0012936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, chronic lymphocytic, susceptibility to, 5","secondary_identifiers":["UMLS:C2675514","MEDGEN:436452","OMIM:612559"],"synonyms":[{"name":"Clls5","type":"related"},{"name":"leukemia, chronic lymphocytic susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, 5","type":"exact"},{"name":"leukemia, chronic lymphocytic, susceptibility to, type 5","type":"exact"}],"termid":"MONDO:0012936","xrefs":{"Monarch":{"xref_id":"0012936"}}}


id: MONDO:0022736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"},{"relation_name":"is_a","term_name":"occupational disorder","termid":"MONDO:0100366"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occupational lung disease","secondary_identifiers":["UMLS:C0264421","ICD9:508.9","SCTID:86157004","MEDGEN:538557"],"synonyms":[{"name":"Occupational inhalation disease","type":"related"},{"name":"Occupational lung disease","type":"related"},{"name":"Occupational lung disorder","type":"related"},{"name":"Occupational pulmonary disease","type":"related"},{"name":"Occupational respiratory disease","type":"related"}],"termid":"MONDO:0022736","xrefs":{"Monarch":{"xref_id":"0022736"}}}


id: MONDO:0010271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked myotubular myopathy-abnormal genitalia syndrome is a rare chromosomal anomaly, partial deletion of the long arm of chromosome X, characterized by a combination of clinical manifestations of X-linked myotubular myopathy and a 46,XY disorder of sex development. Patients present with severe form of congenital myopathy and abnormal male genitalia.","definition_xrefs":["Orphanet:456328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"X-linked myotubular myopathy","termid":"MONDO:0010683"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome X","termid":"MONDO:0017007"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"X-linked myotubular myopathy-abnormal genitalia syndrome","secondary_identifiers":["MEDGEN:335354","OMIM:300219","UMLS:C1846169","MESH:C564561","GARD:17792"],"synonyms":[{"name":"Xq28 contiguous gene deletion syndrome","type":"exact"},{"name":"myotubular myopathy with abnormal genital development","type":"related"}],"termid":"MONDO:0010271","xrefs":{"Monarch":{"xref_id":"0010271"}}}


id: MOD:01305
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N1'-hexosaminyl-L-tryptophan.","definition_xrefs":["Unimod:454#W"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosaminylated residue","termid":"MOD:00876"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N1'-hexosaminylated tryptophan","synonyms":[{"name":"HexN","type":"related"},{"name":"Hexosamine","type":"related"}],"termid":"MOD:01305"}


id: PBO:0046818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid amide hydrolase pseudogene 1","termid":"PBO:0046818"}


id: PBO:0011482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 lysine methyltransferase Clr4","termid":"PBO:0011482"}


id: PBO:0069083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 330, pseudogene","termid":"PBO:0069083"}


id: PBO:0079304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 2","termid":"PBO:0079304"}


id: GO:0008312
data:
  {"annotated_genes":["SJAG_03684","SJAG_03411","SJAG_01759","SJAG_01282","SJAG_02456","SJAG_01840"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57303,60760,63678,67816,74919,77501],"is_not":false,"summary":null,"term":"GO:0008312"}]},"cv_name":"molecular_function","definition":"Binding to a 7S RNA, the RNA component of the signal recognition particle (SRP).","definition_xrefs":["GOC:jl","PMID:6181418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01282":null,"SJAG_01759":null,"SJAG_01840":null,"SJAG_02456":null,"SJAG_03411":null,"SJAG_03684":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"7S RNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"termid":"GO:0008312","terms_by_termid":{"GO:0008312":null}}


id: MONDO:0011004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by severe microcephaly, agyria, agenesis of the corpus callosum, cerebellar hypoplasia, facial dysmorphology and epiphyseal stippling of the metacarpal bones. It has been described in two brothers. The syndrome is transmitted as an autosomal recessive trait and may be an allelic variant of Neu-Laxova syndrome and Lissencephaly type III with cystic dilations of the cerebellum and fetal akinesia sequence.","definition_xrefs":["Orphanet:86822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly type 3","termid":"MONDO:0015148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly type 3-metacarpal bone dysplasia syndrome","secondary_identifiers":["GARD:16763","MEDGEN:371379","SCTID:718720007","MESH:C563383","OMIM:601160","UMLS:C1832678"],"synonyms":[{"name":"lissencephaly type 3 and bone dysplasia","type":"related"},{"name":"lissencephaly type III and bone dysplasia","type":"related"}],"termid":"MONDO:0011004","xrefs":{"Monarch":{"xref_id":"0011004"}}}


id: MONDO:1011768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone spavin, non-human animal","secondary_identifiers":["OMIA:001232"],"termid":"MONDO:1011768","xrefs":{"Monarch":{"xref_id":"1011768"}}}


id: GO:0000126
data:
  {"annotated_genes":["SJAG_00421","SJAG_03007","SJAG_03120"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73757,79508,97589],"is_not":false,"summary":null,"term":"GO:0000126"}]},"cv_name":"cellular_component","definition":"A transcription factor complex that is involved in regulating transcription from RNA polymerase III (Pol III) promoters. TFIIIB contains the TATA-binding protein (TBP) and two Pol III-specific proteins, B'' and BRF.","definition_xrefs":["GOC:mah","PMID:11433012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulator complex","termid":"GO:0090576"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_03007":null,"SJAG_03120":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"transcription factor TFIIIB complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000126","terms_by_termid":{"GO:0000126":null}}


id: MONDO:0030781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"restrictive dermopathy","termid":"MONDO:0031213"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restrictive dermopathy 2","secondary_identifiers":["DOID:0070370","OMIM:619793","UMLS:C5676942","MEDGEN:1801155"],"synonyms":[{"name":"RSDM2","type":"exact"},{"name":"restrictive dermopathy 2","type":"exact"},{"name":"restrictive dermopathy 2, lethal","type":"exact"}],"termid":"MONDO:0030781","xrefs":{"Monarch":{"xref_id":"0030781"}}}


id: PBO:0054886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2300","termid":"PBO:0054886"}


id: MONDO:1012279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tremor, non-human animal","termid":"MONDO:1011861"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, dog","secondary_identifiers":["OMIA:001016-9615"],"termid":"MONDO:1012279","xrefs":{"Monarch":{"xref_id":"1012279"}}}


id: PBO:0026729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_translation_in_response_to_stress_during_vegetative_growth","termid":"PBO:0026729"}


id: GO:0031138
data:
  {"annotated_genes":["SJAG_01254","SJAG_01311","SJAG_01084","SJAG_04026","SJAG_02921","SJAG_03081","SJAG_02773","SJAG_02592","SJAG_00526","SJAG_02444","SJAG_01919","SJAG_04682","SJAG_00600","SJAG_02266","SJAG_03048","SJAG_00145","SJAG_00472","SJAG_04312","SJAG_02426","SJAG_01754","SJAG_00975","SJAG_04394","SJAG_02730","SJAG_01699","SJAG_01401","SJAG_02723"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61675,67383,90817,98407,103640,104380,106940,118625],"is_not":false,"summary":null,"term":"GO:0031138"},{"annotations":[97172],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140538"},{"annotations":[118130,107933,108879,108683,103868,117595,108529,106520,111055,96237,93418,96378,107836,116529,90212,94937,102561],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010515"}]},"cv_name":"biological_process","definition":"Any process that decreases the rate or frequency of conjugation with cellular fusion.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of conjugation with cellular fusion","termid":"GO:0031137"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"conjugation with cellular fusion","termid":"GO:0000747"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00472":null,"SJAG_00526":null,"SJAG_00600":null,"SJAG_00975":null,"SJAG_01084":null,"SJAG_01254":null,"SJAG_01311":null,"SJAG_01401":null,"SJAG_01699":null,"SJAG_01754":null,"SJAG_01919":null,"SJAG_02266":null,"SJAG_02426":null,"SJAG_02444":null,"SJAG_02592":null,"SJAG_02723":null,"SJAG_02730":null,"SJAG_02773":null,"SJAG_02921":null,"SJAG_03048":null,"SJAG_03081":null,"SJAG_04026":null,"SJAG_04312":null,"SJAG_04394":null,"SJAG_04682":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000747"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0000747"}],"interesting_parent_ids":["GO:0000747","GO:0008150"],"is_obsolete":false,"name":"negative regulation of conjugation with cellular fusion","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"down regulation of conjugation with cellular fusion","type":"exact"},{"name":"down-regulation of conjugation with cellular fusion","type":"exact"},{"name":"downregulation of conjugation with cellular fusion","type":"exact"},{"name":"inhibition of conjugation with cellular fusion","type":"narrow"}],"termid":"GO:0031138","terms_by_termid":{"GO:0010515":null,"GO:0031138":null,"GO:0140538":null}}


id: GO:0033831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: kojibiose + phosphate = beta-D-glucose 1-phosphate + D-glucose.","definition_xrefs":["RHEA:11176","EC:2.4.1.230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosyltransferase activity","termid":"GO:0046527"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"kojibiose phosphorylase activity","secondary_identifiers":["KEGG_REACTION:R07264","MetaCyc:2.4.1.230-RXN"],"synonyms":[{"name":"2-alpha-D-glucosyl-D-glucose:phosphate beta-D-glucosyltransferase activity","type":"related"}],"termid":"GO:0033831"}


id: PBO:0058131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR4432 host gene","termid":"PBO:0058131"}


id: MONDO:0019465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nodal marginal zone B-cell lymphoma is a rare, indolent B-cell non-Hodgkin lymphoma, characterized by abnormal clonal proliferation of mature B-lymphocytes with involvement of the lymph nodes, sometimes the bone marrow, and rarely the blood. Clinically it presents with disseminated peripheral, abdominal and/or thoracic lymphadenopathy. Cytopenia and bulky tumors (greater than 5 cm) are rare. Association with Hepatitis C virus and chronic inflammation has been reported.","definition_xrefs":["Orphanet:86867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"marginal zone lymphoma","termid":"MONDO:0017604"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"nodal marginal zone B-cell lymphoma","secondary_identifiers":["MedDRA:10029460","DOID:0080211","SCTID:277623009","UMLS:C0855139","ONCOTREE:NMZL","icd11.foundation:1720785883","GARD:19075","MEDGEN:208959","NCIT:C8863"],"synonyms":[{"name":"Monocytoid B-cell lymphoma","type":"exact"},{"name":"NMZL","type":"exact"},{"name":"nodal marginal zone B-cell lymph.","type":"exact"},{"name":"nodal marginal zone B-cell lymphoma","type":"exact"},{"name":"nodal marginal zone lymphoma","type":"exact"}],"termid":"MONDO:0019465","xrefs":{"Monarch":{"xref_id":"0019465"}}}


id: PR:Q9Y7Q2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gst1 gene.","definition_xrefs":["UniProtKB:Q9Y7Q2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC191.09c","synonyms":[{"name":"GST-I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gst1","type":"exact"}],"termid":"PR:Q9Y7Q2"}


id: PATO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000111 flooding sensitivity (obsolete PATO:0000111)","termid":"PATO:0000111"}


id: PBO:0027798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_tetraplatin","termid":"PBO:0027798"}


id: PBO:0072577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 homolog, RNA polymerase I transcription factor","termid":"PBO:0072577"}


id: GO:0106082
data:
  {"annotated_genes":["SJAG_03960"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97778],"is_not":false,"summary":null,"term":"GO:0106082"}]},"cv_name":"biological_process","definition":"The directed movement of sucrose from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:11136464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate import across plasma membrane","termid":"GO:0098704"},{"relation_name":"is_a","term_name":"sucrose transmembrane transport","termid":"GO:1904982"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03960":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"sucrose import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106082","terms_by_termid":{"GO:0106082":null}}


id: PBO:0054130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1496","termid":"PBO:0054130"}


id: PBO:0036024
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K9_acetylation_during_vegetative_growth","termid":"PBO:0036024"}


id: PBO:0075915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 7","termid":"PBO:0075915"}


id: PBO:0042448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 pseudogene 1","termid":"PBO:0042448"}


id: PBO:0073976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 23 member 1","termid":"PBO:0073976"}


id: GO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete aryl hydrocarbon receptor nuclear translocator activity (obsolete GO:0005061)","synonyms":[{"name":"aryl hydrocarbon receptor nuclear translocator activity","type":"exact"}],"termid":"GO:0005061"}


id: MONDO:0859242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 24","secondary_identifiers":["MEDGEN:1805365","OMIM:619851","DOID:0070406","UMLS:C5676974"],"termid":"MONDO:0859242","xrefs":{"Monarch":{"xref_id":"0859242"}}}


id: GO:0040031
data:
  {"annotated_genes":["SJAG_03572","SJAG_01234","SJAG_00319","SJAG_00083","SJAG_00566","SJAG_04754","SJAG_01958","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97205],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120049"},{"annotations":[79566,61414,65191,82235,108256,108319,59763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031120"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more nucleotides within snRNA, resulting in a change in the properties of the snRNA.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification","termid":"GO:0009451"},{"relation_name":"is_a","term_name":"snRNA processing","termid":"GO:0016180"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00088":null,"SJAG_00319":null,"SJAG_00566":null,"SJAG_01234":null,"SJAG_01958":null,"SJAG_03572":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016073"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016073","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"snRNA modification","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0040031","terms_by_termid":{"GO:0031120":null,"GO:0120049":null}}


id: GO:0102946
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + soyasapogenol E = UDP + a soyasapogenol E monoglucoside.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete soyasapogenol E UDP-glucosyltransferase activity (obsolete GO:0102946)","termid":"GO:0102946"}


id: GO:0047098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 O2 + donor-H2 + Latia luciferin = light + H2O + acceptor + formate + CO2 + oxidized Latia luciferin.","definition_xrefs":["EC:1.14.99.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"},{"relation_name":"is_a","term_name":"luciferin monooxygenase activity","termid":"GO:0045289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"Latia-luciferin monooxygenase (demethylating) activity","secondary_identifiers":["RHEA:12677","MetaCyc:1.14.99.21-RXN"],"synonyms":[{"name":"Latia luciferin monooxygenase (demethylating)","type":"related"},{"name":"Latia-luciferin,hydrogen-donor:oxygen oxidoreductase (demethylating)","type":"related"},{"name":"luciferase (Latia luciferin)","type":"related"}],"termid":"GO:0047098"}


id: PR:Q09682
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A proteasome subunit alpha type-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00166","PRO:DNx","PANTHER:PTHR11599:SF13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome subunit alpha type-3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.01c","secondary_identifiers":["UniProtKB:Q09682"],"synonyms":[{"name":"Spom972h-PSMA4","type":"exact"}],"termid":"PR:Q09682"}


id: PBO:0056931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermediate peptidase pseudogene 3","termid":"PBO:0056931"}


id: GO:1900318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of methane biosynthetic process from dimethylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"is_a","term_name":"regulation of alkane biosynthetic process","termid":"GO:1901577"},{"relation_name":"regulates","term_name":"methane biosynthetic process from dimethylamine","termid":"GO:2001129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"regulation of methane biosynthetic process from dimethylamine","termid":"GO:1900318"}


id: PBO:0051955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPR2 and SSPN antisense RNA 1","termid":"PBO:0051955"}


id: GO:0060293
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Differentiated cytoplasm associated with a pole of an oocyte, egg or early embryo that will be inherited by the cells that will give rise to the germ line.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pole plasm","termid":"GO:0045495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"germ plasm","secondary_identifiers":["Wikipedia:Germ_plasm"],"termid":"GO:0060293"}


id: GO:0047330
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-D-glucose + long chain polyphosphate = glucose-6-phosphate + long chain polyphosphate.","definition_xrefs":["EC:2.7.1.63","MetaCyc:2.7.1.63-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"polyphosphate-glucose phosphotransferase activity","secondary_identifiers":["RHEA:22036"],"synonyms":[{"name":"polyphosphate glucokinase activity","type":"related"},{"name":"polyphosphate-D-(+)-glucose-6-phosphotransferase activity","type":"related"},{"name":"polyphosphate-glucose 6-phosphotransferase activity","type":"related"},{"name":"polyphosphate:D-glucose 6-phosphotransferase activity","type":"related"}],"termid":"GO:0047330"}


id: GO:0048697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of collateral sprouting in the absence of injury.","definition_xrefs":["GOC:jid","GOC:lm","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of collateral sprouting","termid":"GO:0048672"},{"relation_name":"is_a","term_name":"regulation of collateral sprouting in absence of injury","termid":"GO:0048696"},{"relation_name":"positively_regulates","term_name":"collateral sprouting in absence of injury","termid":"GO:0048669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of collateral sprouting in absence of injury","synonyms":[{"name":"activation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"stimulation of collateral sprouting in the absence of injury","type":"narrow"},{"name":"up regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"up-regulation of collateral sprouting in the absence of injury","type":"exact"},{"name":"upregulation of collateral sprouting in the absence of injury","type":"exact"}],"termid":"GO:0048697"}


id: PBO:0027985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_normal_septum_morphology","termid":"PBO:0027985"}


id: GO:0019888
data:
  {"annotated_genes":["SJAG_00229","SJAG_00526","SJAG_04627","SJAG_00078","SJAG_04999","SJAG_03353","SJAG_02380","SJAG_00369","SJAG_03681","SJAG_00534","SJAG_03793","SJAG_01901","SJAG_04638","SJAG_03940","SJAG_00095","SJAG_03272","SJAG_03309","SJAG_04968","SJAG_01270","SJAG_04871","SJAG_01142"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70257,80193,94993,98347],"is_not":false,"summary":null,"term":"GO:0019888"},{"annotations":[75006,90734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008597"},{"annotations":[120015,99711,74582,94939,80827,78459,117040,76679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072542"},{"annotations":[72252,91389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004864"},{"annotations":[78002,76560,89862],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004865"},{"annotations":[73665,77783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008160"}]},"cv_name":"molecular_function","definition":"Binds to and modulates the activity of a protein phosphatase.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase regulator activity","termid":"GO:0019208"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00095":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_01142":null,"SJAG_01270":null,"SJAG_01901":null,"SJAG_02380":null,"SJAG_03272":null,"SJAG_03309":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04627":null,"SJAG_04638":null,"SJAG_04871":null,"SJAG_04968":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"protein phosphatase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030362","GO:0008599","GO:0030359","Reactome:R-HSA-180038","GO:0008601"],"synonyms":[{"name":"calcineurin regulator activity","type":"narrow"},{"name":"calcineurin, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase 2 regulator activity","type":"narrow"},{"name":"protein phosphatase 2, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase 3 regulator activity","type":"narrow"},{"name":"protein phosphatase 3, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase type 1 regulator activity","type":"narrow"},{"name":"protein phosphatase type 1, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase type 2A regulator activity","type":"narrow"},{"name":"protein phosphatase type 2A, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase type 2B regulator activity","type":"narrow"},{"name":"protein phosphatase type 2B, intrinsic regulator activity","type":"narrow"},{"name":"protein phosphatase type 4 regulator activity","type":"narrow"},{"name":"protein phosphatase type 4, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0019888","terms_by_termid":{"GO:0004864":null,"GO:0004865":null,"GO:0008160":null,"GO:0008597":null,"GO:0019888":null,"GO:0072542":null}}


id: GO:0060200
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A clathrin-sculpted lipid bilayer membrane-enclosed vesicle after clathrin release and containing acetylcholine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"clathrin-sculpted vesicle","termid":"GO:0060198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"clathrin-sculpted acetylcholine transport vesicle","synonyms":[{"name":"clathrin sculpted acetylcholine constitutive secretory pathway transport vesicle","type":"exact"},{"name":"clathrin sculpted acetylcholine transport vesicle","type":"exact"}],"termid":"GO:0060200"}


id: PBO:0049658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 12","termid":"PBO:0049658"}


id: MONDO:0022067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cantu Sanchez-Corona Fragoso syndrome","secondary_identifiers":["MESH:C535571","MEDGEN:419290","UMLS:C2930937"],"synonyms":[{"name":"severe mental deficiency proportionate dwarfism and delayed sexual maturation","type":"related"},{"name":"severe mental deficiency, proportionate dwarfism, and delayed sexual maturation","type":"related"}],"termid":"MONDO:0022067","xrefs":{"Monarch":{"xref_id":"0022067"}}}


id: GO:1900184
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of xanthone-containing compound biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of xanthone-containing compound biosynthetic process","termid":"GO:1900183"},{"relation_name":"negatively_regulates","term_name":"xanthone-containing compound biosynthetic process","termid":"GO:2001307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of xanthone-containing compound biosynthetic process","synonyms":[{"name":"down regulation of xanthone biosynthesis","type":"narrow"},{"name":"down regulation of xanthone biosynthetic process","type":"narrow"},{"name":"down regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"down regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"down regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"down regulation of xanthone-containing compound formation","type":"exact"},{"name":"down regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"down-regulation of xanthone biosynthesis","type":"narrow"},{"name":"down-regulation of xanthone biosynthetic process","type":"narrow"},{"name":"down-regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"down-regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"down-regulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"down-regulation of xanthone-containing compound formation","type":"exact"},{"name":"down-regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"downregulation of xanthone biosynthesis","type":"narrow"},{"name":"downregulation of xanthone biosynthetic process","type":"narrow"},{"name":"downregulation of xanthone-containing compound anabolism","type":"exact"},{"name":"downregulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"downregulation of xanthone-containing compound biosynthetic process","type":"exact"},{"name":"downregulation of xanthone-containing compound formation","type":"exact"},{"name":"downregulation of xanthone-containing compound synthesis","type":"exact"},{"name":"inhibition of xanthone biosynthesis","type":"narrow"},{"name":"inhibition of xanthone biosynthetic process","type":"narrow"},{"name":"inhibition of xanthone-containing compound anabolism","type":"exact"},{"name":"inhibition of xanthone-containing compound biosynthesis","type":"exact"},{"name":"inhibition of xanthone-containing compound biosynthetic process","type":"narrow"},{"name":"inhibition of xanthone-containing compound formation","type":"exact"},{"name":"inhibition of xanthone-containing compound synthesis","type":"exact"},{"name":"negative regulation of xanthone biosynthesis","type":"narrow"},{"name":"negative regulation of xanthone biosynthetic process","type":"narrow"},{"name":"negative regulation of xanthone-containing compound anabolism","type":"exact"},{"name":"negative regulation of xanthone-containing compound biosynthesis","type":"exact"},{"name":"negative regulation of xanthone-containing compound formation","type":"exact"},{"name":"negative regulation of xanthone-containing compound synthesis","type":"exact"},{"name":"negative regulation of xanthones anabolism","type":"exact"}],"termid":"GO:1900184"}


id: PBO:0042676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CEA cell adhesion molecule pseudogene 10","termid":"PBO:0042676"}


id: PBO:0058684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6812","termid":"PBO:0058684"}


id: PBO:0055456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2888","termid":"PBO:0055456"}


id: PBO:0110361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC2 pseudogene 1","termid":"PBO:0110361"}


id: MOD:01200
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-heptosyl-L-threonine.","definition_xrefs":["Unimod:490#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heptosylated residue","termid":"MOD:00925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O-heptosyl-L-threonine","synonyms":[{"name":"Hep","type":"related"},{"name":"Heptose","type":"related"}],"termid":"MOD:01200"}


id: FYPO:0004454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of calcium ions than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0002682","FYPO:0000003"],"is_obsolete":false,"name":"resistance to calcium","synonyms":[{"name":"resistance to calcium during mitotic cell cycle","type":"related"},{"name":"resistance to calcium during vegetative growth","type":"exact"},{"name":"resistance to calcium ion","type":"exact"},{"name":"resistance to calcium ions","type":"exact"},{"name":"resistant to calcium","type":"exact"}],"termid":"FYPO:0004454"}


id: PBO:0057603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 940","termid":"PBO:0057603"}


id: PBO:0087003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein (RhoGAP); contains RhoGAP activity specific for both Rho1p and Cdc42p, and potentially Rho4p; acts with the RhoGAP Bem3p to negatively regulate Cdc42p-dependent signal transduction; involved in the control of cytoskeleton organization and cellular morphogenesis; required for bud emergence and for the morphogenesis checkpoint in response to actin depolymerization; localizes to sites of polarized growth and the plasma membrane","termid":"PBO:0087003"}


id: FYPO:0002427
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and has an abnormal shape. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"is_a","term_name":"inviable spore","termid":"FYPO:0002151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000005"],"is_obsolete":false,"name":"inviable spore with abnormal shape","synonyms":[{"name":"lethal; spore with abnormal shape","type":"exact"}],"termid":"FYPO:0002427"}


id: GO:0004459
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-lactate + NAD+ = pyruvate + NADH + H+.","definition_xrefs":["RHEA:23444"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2-hydroxycarboxylate dehydrogenase (NAD+) activity","termid":"GO:0102443"},{"relation_name":"is_a","term_name":"L-lactate dehydrogenase activity","termid":"GO:0140171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"L-lactate dehydrogenase (NAD+) activity","secondary_identifiers":["Reactome:R-HSA-70510","MetaCyc:L-LACTATE-DEHYDROGENASE-RXN","Reactome:R-HSA-71849","EC:1.1.1.27","Reactome:R-HSA-6807826"],"synonyms":[{"name":"L-lactate dehydrogenase activity","type":"broad"},{"name":"L-lactic acid dehydrogenase activity","type":"related"},{"name":"L-lactic dehydrogenase activity","type":"related"}],"termid":"GO:0004459"}


id: MONDO:1011279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Age-related macular degeneration that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration, non-human animal","termid":"MONDO:1010351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age-related macular degeneration, Rhesus monkey","secondary_identifiers":["OMIA:002142-9544"],"termid":"MONDO:1011279","xrefs":{"Monarch":{"xref_id":"1011279"}}}


id: _global:has_role
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between an independent continuant (the bearer) and a role, in which the role specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"has_characteristic","termid":"_global:has_characteristic"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_role","secondary_identifiers":["RO:0000087"],"termid":"_global:has_role"}


id: GO:0070345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate or extent of fat cell proliferation.","definition_xrefs":["GOC:sl","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of fat cell proliferation","termid":"GO:0070344"},{"relation_name":"negatively_regulates","term_name":"fat cell proliferation","termid":"GO:0070341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of fat cell proliferation","synonyms":[{"name":"down regulation of fat cell proliferation","type":"exact"},{"name":"down-regulation of fat cell proliferation","type":"exact"},{"name":"downregulation of fat cell proliferation","type":"exact"},{"name":"inhibition of fat cell proliferation","type":"narrow"},{"name":"negative regulation of adipocyte proliferation","type":"exact"},{"name":"negative regulation of adipose cell proliferation","type":"exact"}],"termid":"GO:0070345"}


id: PR:Q10134
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fep1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sensing transcription factor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.01","synonyms":[{"name":"Gaf-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-fep1","type":"exact"},{"name":"transcription factor gaf2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10134"}


id: PBO:0002310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate dehydrogenase (NAD+) subunit 1 Idh1","termid":"PBO:0002310"}


id: PBO:0089357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside 2-deoxyribosyltransferase","termid":"PBO:0089357"}


id: MONDO:0957564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital smooth muscle hamartoma, with or without hemihypertrophy","secondary_identifiers":["MEDGEN:1847218","UMLS:C5882676","OMIM:620470"],"termid":"MONDO:0957564","xrefs":{"Monarch":{"xref_id":"0957564"}}}


id: PBO:0080841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 1 pseudogene 5","termid":"PBO:0080841"}


id: GO:0050488
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + ecdysteroid = UDP + glucosyl-ecdysteroid.","definition_xrefs":["PMID:10073711","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"ecdysteroid UDP-glucosyltransferase activity","secondary_identifiers":["GO:0050489"],"synonyms":[{"name":"ecdysteroid UDP-glucosyl/UDP-glucuronosyl transferase activity","type":"related"}],"termid":"GO:0050488"}


id: GO:0035476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of angioblasts, cells involved in blood vessel morphogenesis.","definition_xrefs":["PMID:19815777","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"angioblast cell migration","termid":"GO:0035476"}


id: PBO:0040020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 8 pseudogene 1","termid":"PBO:0040020"}


id: MONDO:1030015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A porphyria disorder that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"porphyria","termid":"MONDO:0037939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"acquired porphyria","secondary_identifiers":["MESH:D011164","NCIT:C97096","UMLS:C0948592","MEDGEN:1853291"],"termid":"MONDO:1030015","xrefs":{"Monarch":{"xref_id":"1030015"}}}


id: PBO:0017476
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-depends_on","termid":"PBO:0017476"}


id: PATO:0000197
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000197 transfer_arousal (obsolete PATO:0000197)","termid":"PATO:0000197"}


id: PBO:0074109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 1 (Augustine blood group)","termid":"PBO:0074109"}


id: PBO:0052943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 27-1","termid":"PBO:0052943"}


id: GO:0102809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + delphinidin 3-O-beta-D-glucoside = H+ + delphinidin 3-O-sophoroside + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete delphinidin 3-O-glucoside 2''-O-glucosyltransferase activity (obsolete GO:0102809)","termid":"GO:0102809"}


id: GO:0019365
data:
  {"annotated_genes":["SJAG_01500","SJAG_00957","SJAG_03298","SJAG_04467"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72763,82014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[91027,111661,92658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019358"}]},"cv_name":"biological_process","definition":"Any process that generates a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base, from derivatives of them without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine nucleotide biosynthetic process","termid":"GO:0019363"},{"relation_name":"is_a","term_name":"nucleotide salvage","termid":"GO:0043173"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01500":null,"SJAG_03298":null,"SJAG_04467":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"pyridine nucleotide salvage","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyridine nucleotide cycling","type":"exact"}],"termid":"GO:0019365","terms_by_termid":{"GO:0019358":null,"GO:0034355":null}}


id: GO:1902973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA ligation involved in mitotic cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete mitotic DNA replication DNA ligation (obsolete GO:1902973)","synonyms":[{"name":"DNA ligation involved in mitotic DNA replication","type":"exact"},{"name":"DNA ligation involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902973"}


id: GO:0080056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vascular tissue pattern formation as it occurs in the petal of vascular plants.","definition_xrefs":["PMID:17369435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylem and phloem pattern formation","termid":"GO:0010051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"petal vascular tissue pattern formation","termid":"GO:0080056"}


id: PBO:0086161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for recombination and meiotic nuclear division; forms a complex with Hop2p, which is involved in chromosome pairing and repair of meiotic double-strand breaks","termid":"PBO:0086161"}


id: PATO:0000195
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000195 startle response (obsolete PATO:0000195)","termid":"PATO:0000195"}


id: GO:0072532
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the meta-hydroxylation of any of the three phenolic rings on triferuloyl spermidine or any of its mono- or di-(hydroxyferuloyl)-spermidine derivatives.","definition_xrefs":["PMID:19779199","GOC:kad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}


id: GO:0010897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of triglyceride.","definition_xrefs":["GOC:rn","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of triglyceride catabolic process","termid":"GO:0010896"},{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"negative regulation of triglyceride metabolic process","termid":"GO:0090209"},{"relation_name":"negatively_regulates","term_name":"triglyceride catabolic process","termid":"GO:0019433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of triglyceride catabolic process","synonyms":[{"name":"negative regulation of triacylglycerol catabolic process","type":"exact"}],"termid":"GO:0010897"}


id: GO:0045025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A mitochondrial protein complex with 3' to 5' exoribonuclease activity that participates in intron-independent turnover and processing of mitochondrial transcripts. In humans, the mitochondrial degradosome is a pentameric complex, and in yeast it exists as a heterodimer.","definition_xrefs":["PMID:9829834","PMID:10397341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"is_a","term_name":"exoribonuclease complex","termid":"GO:1905354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial degradosome","synonyms":[{"name":"mtEXO","type":"exact"}],"termid":"GO:0045025"}


id: PBO:0061273
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOX4 pseudogene 1","termid":"PBO:0061273"}


id: PBO:0056288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MANEAL pseudogene 1","termid":"PBO:0056288"}


id: PBO:0109460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein required for translocation of Man5GlcNac2-PP-Dol from the cytoplasmic side to the lumenal side of the ER Rft1","termid":"PBO:0109460"}


id: PBO:0051378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 5-2","termid":"PBO:0051378"}


id: GO:0002053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of activating or increasing the rate or extent of mesenchymal cell proliferation. Mesenchymal cells are loosely organized embryonic cells.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell proliferation","termid":"GO:0010464"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell proliferation","termid":"GO:0010463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell proliferation","synonyms":[{"name":"activation of mesenchymal cell proliferation","type":"narrow"},{"name":"stimulation of mesenchymal cell proliferation","type":"narrow"},{"name":"up regulation of mesenchymal cell proliferation","type":"exact"},{"name":"up-regulation of mesenchymal cell proliferation","type":"exact"},{"name":"upregulation of mesenchymal cell proliferation","type":"exact"}],"termid":"GO:0002053"}


id: PBO:0052522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 35","termid":"PBO:0052522"}


id: GO:0009829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events resulting in chemical or structural alterations of existing cell walls that contribute to fruit ripening.","definition_xrefs":["GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type cell wall modification","termid":"GO:0009827"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"fruit ripening","termid":"GO:0009835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"cell wall modification involved in fruit ripening","synonyms":[{"name":"cell wall modification during ripening","type":"related"}],"termid":"GO:0009829"}


id: PBO:0059914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 37","termid":"PBO:0059914"}


id: SO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pseudogenic variable region which closely resembles a known functional imunoglobulin variable gene but in which the coding region has stop codons, frameshift mutations or a mutation that effects the initiation codon that rearranges at the DNA level and codes the variable region of an immunoglobulin chain.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_pseudogene","termid":"SO:0002098"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_V_pseudogene","synonyms":[{"name":"IG V pseudogene","type":"exact"},{"name":"IG variable pseudogene","type":"exact"},{"name":"IG_variable_pseudogene","type":"exact"},{"name":"Immunoglobulin variable pseudogene","type":"exact"},{"name":"Immunoglobulin_variable_pseudogene","type":"exact"}],"termid":"SO:0002102"}


id: PBO:0086953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulator of filamentous growth; interacts with FLO11 promoter and regulates FLO11 expression; binds to transcription factors Flo8p and Mss11p; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; YDL233W is not an essential gene","termid":"PBO:0086953"}


id: GO:0045563
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of TRAIL receptor biosynthetic process (obsolete GO:0045563)","synonyms":[{"name":"down regulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"down-regulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"downregulation of TRAIL receptor biosynthetic process","type":"exact"},{"name":"inhibition of TRAIL receptor biosynthetic process","type":"narrow"},{"name":"negative regulation of TRAIL receptor anabolism","type":"exact"},{"name":"negative regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"negative regulation of TRAIL receptor formation","type":"exact"},{"name":"negative regulation of TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045563"}


id: GO:0051416
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to myotilin, a structural component of the Z-discs in human skeletal and cardiac muscle. Its C-terminus contains two immunoglobulin-like domains and the unique N-terminal half has a serine-rich region, with numerous potential phosphorylation sites, and a stretch of hydrophobic amino acids. Myotilin forms homodimers and binds to alpha-actinin, F-actin, and filamin C.","definition_xrefs":["PMID:15752755","PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete myotilin binding (obsolete GO:0051416)","synonyms":[{"name":"myotilin binding","type":"exact"}],"termid":"GO:0051416"}


id: PBO:0087787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sulfite reductase beta subunit; involved in amino acid biosynthesis, transcription repressed by methionine","termid":"PBO:0087787"}


id: PBO:0091270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial GTPase related protein Gep3","termid":"PBO:0091270"}


id: FYPO:0007654
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the maintenance of localization of a protein at a location in heterochromatin at heterochromatin islands occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:32269268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to heterochromatin during vegetative growth","termid":"FYPO:0002385"},{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin island","termid":"FYPO:0008418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to heterochromatin island at meiotic gene during vegetative growth","synonyms":[{"name":"decreased protein localisation to chromatin at heterochromatin island at meiotic gene during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at heterochromatin island at meiosis gene during vegetative growth","type":"exact"},{"name":"decreased protein localization to chromatin at heterochromatin island at meiotic gene during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007654"}


id: PBO:0119270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human REEP1","termid":"PBO:0119270"}


id: PBO:0044813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108B","termid":"PBO:0044813"}


id: MONDO:0015362
data:
  {"annotated_genes":["SJAG_01537","SJAG_01522","SJAG_01352","SJAG_02919","SJAG_03815","SJAG_04567","SJAG_05289","SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[87998,87999,88000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[88614,88615,88613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[88295,88296,88294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[87299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[88150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[87675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[88175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[87200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"}]},"cv_name":"mondo","definition":"Autosomal dominant form of distal hereditary motor neuropathy.","definition_xrefs":["MONDO:patterns/autosomal_dominant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"spinal muscular atrophy","termid":"MONDO:0001516"},{"relation_name":"is_a","term_name":"distal hereditary motor neuropathy","termid":"MONDO:0018894"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01352":null,"SJAG_01522":null,"SJAG_01537":null,"SJAG_02695":null,"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null,"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19926","OMIMPS:182960","Orphanet:140465","MEDGEN:1787720","DOID:0111198","UMLS:C5548212"],"synonyms":[{"name":"autosomal dominant dHMN","type":"exact"},{"name":"autosomal dominant distal hereditary motor neuropathy","type":"exact"},{"name":"autosomal dominant distal spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy, autosomal dominant","type":"exact"}],"termid":"MONDO:0015362","terms_by_termid":{"MONDO:0008025":null,"MONDO:0010043":null,"MONDO:0011879":null,"MONDO:0012080":null,"MONDO:0013243":null,"MONDO:0013884":null,"MONDO:0015353":null,"MONDO:0030860":null,"MONDO:0060585":null},"xrefs":{"Monarch":{"xref_id":"0015362"}}}


id: GO:0051065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dCTP + thioredoxin disulfide + H2O = CTP + thioredoxin. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["MetaCyc:1.17.4.2-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete CTP reductase activity (obsolete GO:0051065)","synonyms":[{"name":"CTP reduction","type":"related"}],"termid":"GO:0051065"}


id: _global:function_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a function and an independent continuant (the bearer), in which the function specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"function_of","secondary_identifiers":["RO:0000079"],"termid":"_global:function_of"}


id: PBO:0048630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIT ArfGAP 1","termid":"PBO:0048630"}


id: PBO:0079615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 K","termid":"PBO:0079615"}


id: PBO:0067343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 440, pseudogene","termid":"PBO:0067343"}


id: GO:0018479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzaldehyde + NAD+ + H2O = benzoate + NADH + H+.","definition_xrefs":["EC:1.2.1.28"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NAD+) activity","termid":"GO:0004029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"benzaldehyde dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN","RHEA:11840","UM-BBD_reactionID:r0269"],"synonyms":[{"name":"benzaldehyde (NAD) dehydrogenase activity","type":"related"},{"name":"benzaldehyde:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018479"}


id: MONDO:0024637
data:
  {"annotated_genes":["SJAG_03689","SJAG_01111","SJAG_04755","SJAG_04213","SJAG_05313","SJAG_00490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88282],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011655"},{"annotations":[87163,87162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012252"},{"annotations":[89336,89335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"},{"annotations":[88934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859046"}]},"cv_name":"mondo","definition":"A malignant neoplasm arising exclusively from the soft tissues.","definition_xrefs":["NCIT:C4867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00490":null,"SJAG_01111":null,"SJAG_03689":null,"SJAG_04213":null,"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant soft tissue neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4551686","SCTID:269469005","MEDGEN:1632429"],"synonyms":[{"name":"malignant neoplasm of soft tissue","type":"exact"},{"name":"malignant neoplasm of the soft tissue","type":"exact"},{"name":"malignant soft tissue neoplasm","type":"exact"},{"name":"malignant soft tissue tumor","type":"exact"},{"name":"malignant soft tissue tumour","type":"exact"},{"name":"malignant tumor of soft tissue","type":"exact"},{"name":"malignant tumor of the soft tissue","type":"exact"},{"name":"malignant tumour of soft tissue","type":"exact"},{"name":"malignant tumour of the soft tissue","type":"exact"}],"termid":"MONDO:0024637","terms_by_termid":{"MONDO:0011655":null,"MONDO:0012252":null,"MONDO:0013224":null,"MONDO:0859046":null},"xrefs":{"Monarch":{"xref_id":"0024637"}}}


id: PBO:0043095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 7","termid":"PBO:0043095"}


id: MONDO:0004169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A combination of distressing physical, psychologic, or behavioral changes that occur during the luteal phase of the menstrual cycle. Symptoms of pms are diverse (such as pain, water-retention, anxiety, cravings, and depression) and they diminish markedly 2 or 3 days after the initiation of menses.","definition_xrefs":["MESH:D011293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premenstrual tension","secondary_identifiers":["DOID:727","MEDGEN:87683","ICD9:625.4","SCTID:82639001","UMLS:C0376356"],"termid":"MONDO:0004169","xrefs":{"Monarch":{"xref_id":"0004169"}}}


id: MONDO:0000490
data:
  {"annotated_genes":["SJAG_04621","SJAG_04001","SJAG_01143","SJAG_00118"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[87913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013589"},{"annotations":[88868,88869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014462"}]},"cv_name":"mondo","definition":"A hardening of the kidney glomerulus caused by scarring of the blood vessels.","definition_xrefs":["NCIT:C120888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_01143":null,"SJAG_04001":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"glomerulosclerosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:197661001","DOID:0050851","icd11.foundation:2068645853","MEDGEN:61248","UMLS:C0178664"],"synonyms":[{"name":"glomerular sclerosis","type":"exact"}],"termid":"MONDO:0000490","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013589":null,"MONDO:0014462":null},"xrefs":{"Monarch":{"xref_id":"0000490"}}}


id: PR:000027567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mei2 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis protein mei2","synonyms":[{"name":"mei2","type":"exact"}],"termid":"PR:000027567"}


id: PBO:0068304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 8","termid":"PBO:0068304"}


id: MONDO:0017633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare intoxication due to medical products (obsolete MONDO:0017633)","secondary_identifiers":["Orphanet:306640"],"termid":"MONDO:0017633","xrefs":{"Monarch":{"xref_id":"0017633"}}}


id: PBO:0072207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 6","termid":"PBO:0072207"}


id: PBO:0109262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory calcium-binding phosphoprotein proline-glutamine rich 1","termid":"PBO:0109262"}


id: FYPO:0001129
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_01745:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01745","name":"lem2delta","uniquename":"SJAG_01745:allele-1"},"SJAG_03783:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03783","name":"vps24delta","uniquename":"SJAG_03783:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"},"SJAG_03892:allele-2":{"allele_type":"amino_acid_mutation","description":"E233Q","gene_uniquename":"SJAG_03892","name":"Vps4-EQ","uniquename":"SJAG_03892:allele-2"},"SJAG_03892:allele-3":{"allele_type":"amino_acid_mutation","description":"I307T L327S","gene_uniquename":"SJAG_03892","name":"vps4-ts","uniquename":"SJAG_03892:allele-3"},"SJAG_04489:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04489","name":"did4delta","uniquename":"SJAG_04489:allele-1"},"SJAG_05207:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_05207","name":"cmp7delta","uniquename":"SJAG_05207:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"}],"single_locus_phenotype":[{"annotations":[121336,121334,121338,121339,121337,121341,121340,121310,121317,121318,121320,121311,121321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007771"},{"annotations":[121314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007073"},{"annotations":[121313],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0003657"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleus","termid":"FYPO:0002956"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03783":null,"SJAG_03892":null,"SJAG_04489":null,"SJAG_05207":null},"genotype_count":9,"genotypes_by_uniquename":{"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"Vps4-EQ(E233Q aa)","display_uniquename":"Vps4-EQ-E233Q-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-2","expression":"Not assayed or wild 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id: PBO:0116478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRR/PPR or ankyrin containing protein","termid":"PBO:0116478"}


id: PBO:0117414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 9","termid":"PBO:0117414"}


id: MONDO:0014568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal dominant spastic paraplegia type 73 (SPG73) is a pure form of hereditary spastic paraplegia characterized by adult onset of crural spastic paraparesis, hyperreflexia, extensor plantar responses, proximal muscle weakness, mild muscle atrophy, decreased vibration sensation at ankles, and mild urinary dysfunction. foot deformities have been reported to eventually occur in some patients. No abnormalities are noted on brain magnetic resonance imaging and peripheral nerve conduction velocity studies.","definition_xrefs":["Orphanet:444099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 73","secondary_identifiers":["MEDGEN:1800404","UMLS:C5568981","OMIM:616282","GARD:17763","DOID:0110818"],"synonyms":[{"name":"CPT1C autosomal dominant pure spastic paraplegia","type":"exact"},{"name":"SPG73","type":"exact"},{"name":"autosomal dominant pure spastic paraplegia caused by mutation in CPT1C","type":"exact"},{"name":"autosomal dominant spastic paraplegia 73","type":"exact"},{"name":"autosomal dominant spastic paraplegia type 73","type":"exact"},{"name":"hereditary spastic paraplegia type 73","type":"exact"},{"name":"spastic paraplegia 73, autosomal dominant","type":"related"}],"termid":"MONDO:0014568","xrefs":{"Monarch":{"xref_id":"0014568"}}}


id: PR:P0CT66
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1801 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S18-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16D10.11c","synonyms":[{"name":"Spom972h-rps1801","type":"exact"}],"termid":"PR:P0CT66"}


id: PBO:0113194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major of three pyruvate decarboxylase isozymes; key enzyme in alcoholic fermentation; decarboxylates pyruvate to acetaldehyde; involved in amino acid catabolism; subject to glucose-, ethanol-, and autoregulation; activated by phosphorylation in response to glucose levels; N-terminally propionylated in vivo; protein tyrosine nitration on Tyr157 or Tyr344 inhibits activity and impairs fermentation","termid":"PBO:0113194"}


id: GO:0042930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the siderochrome enterobactin, a cyclic trimer of 2, 3 dihydroxybenzoylserine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"siderophore transport","termid":"GO:0015891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"enterobactin transport","synonyms":[{"name":"enterochelin transport","type":"exact"}],"termid":"GO:0042930"}


id: GO:0099191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by brain-derived neurotrophic factor (BDNF) crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"trans-synaptic signaling by BDNF","synonyms":[{"name":"trans-synaptic signaling by brain-derived neurotrophic factor","type":"exact"}],"termid":"GO:0099191"}


id: MONDO:0859325
data:
  {"annotated_genes":["SJAG_04853","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87559,87560],"is_not":false,"summary":null,"term":"MONDO:0859325"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 109","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070378","MEDGEN:1824036","UMLS:C5774263","OMIM:620145"],"termid":"MONDO:0859325","terms_by_termid":{"MONDO:0859325":null},"xrefs":{"Monarch":{"xref_id":"0859325"}}}


id: MONDO:0026777
data:
  {"annotated_genes":["SJAG_00853"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87873],"is_not":false,"summary":null,"term":"MONDO:0026777"}]},"cv_name":"mondo","definition":"An adult-onset inflammatory disease that affects only males and is caused by somatic, not germline, mutations. The disorder is characterized by adult onset of rheumatologic symptoms at a mean age of 64 years. Features include recurrent fevers, pulmonary and dermatologic inflammatory manifestations, vasculitis, deep vein thrombosis, arthralgias, and ear and nose chondritis. Laboratory studies indicate hematologic abnormalities, including macrocytic anemia, as well as increased levels of acute-phase reactants; about half of patients have positive autoantibodies. Bone marrow biopsy shows degenerative vacuolization restricted to myeloid and erythroid precursor cells, as well as variable hematopoietic dyspoiesis and dysplasias. The condition does not respond to rheumatologic medications and the features may result in premature death.","definition_xrefs":["OMIM:301054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00853":null},"genotype_count":0,"is_obsolete":false,"name":"VEXAS syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:596753","GARD:15001","MEDGEN:1765785","NCIT:C181924","DOID:0080828","UMLS:C5435753"],"synonyms":[{"name":"VEXAS","type":"exact"},{"name":"VEXAS syndrome, somatic","type":"exact"},{"name":"vacuoles, E1 enzyme, X-linked, autoinflammatory, somatic syndrome","type":"exact"}],"termid":"MONDO:0026777","terms_by_termid":{"MONDO:0026777":null},"xrefs":{"Monarch":{"xref_id":"0026777"}}}


id: MONDO:0010401
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"X-linked myopathy with postural muscle atrophy is a rare progressive muscular dystrophy characterized by an adult-onset scapulo-axio-peroneal myopathy. Clinical presentation includes shoulder girdle atrophy, scapular winging, axial muscular atrophy of postural muscles combined with a generalized hypertrophy. Typically, neck rigidity, rigid spine, Achilles tendon shortening, and respiratory insufficiency later in disease course are present.","definition_xrefs":["Orphanet:178461"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked Emery-Dreifuss muscular dystrophy","termid":"MONDO:0010680"},{"relation_name":"is_a","term_name":"FHL1-related myopathy","termid":"MONDO:0800462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005336"],"is_obsolete":false,"name":"X-linked myopathy with postural muscle atrophy","secondary_identifiers":["OMIM:300696","icd11.foundation:420677690","UMLS:C2678055","GARD:17081","DOID:0070251","MEDGEN:395525"],"synonyms":[{"name":"Ehlers-Danlos syndrome, classic-like, 1","type":"related"},{"name":"Emery-Dreifuss muscular dystrophy 6, X-linked","type":"related"},{"name":"X-linked myopathy with postural muscle atrophy","type":"exact"},{"name":"XMPMA","type":"exact"},{"name":"myopathy, X-linked, with postural muscle atrophy","type":"related"},{"name":"myopathy, X-linked, with postural muscle atrophy, X-linked recessive","type":"exact"}],"termid":"MONDO:0010401","xrefs":{"Monarch":{"xref_id":"0010401"}}}


id: FYPO:0003430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells contain fewer microtubules than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton during vegetative growth","termid":"FYPO:0004315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002399","FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"microtubules present in decreased numbers","synonyms":[{"name":"decreased level of MTs","type":"exact"},{"name":"microtubules present in decreased numbers during mitotic cell cycle","type":"related"},{"name":"microtubules present in decreased numbers during vegetative growth","type":"exact"},{"name":"microtubules present in reduced numbers","type":"exact"}],"termid":"FYPO:0003430"}


id: MONDO:0013979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the LRRC6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 19","secondary_identifiers":["DOID:0110608","OMIM:614935","GARD:15883","UMLS:C3543826","MEDGEN:762332"],"synonyms":[{"name":"CILD19","type":"exact"},{"name":"LRRC6 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 19","type":"related"},{"name":"ciliary dyskinesia, primary, 19, with or without situs inversus","type":"related"},{"name":"ciliary dyskinesia, primary, type 19","type":"exact"},{"name":"primary ciliary dyskinesia 19","type":"exact"},{"name":"primary ciliary dyskinesia 19 with or without situs inversus","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in LRRC6","type":"exact"},{"name":"primary ciliary dyskinesia type 19","type":"exact"}],"termid":"MONDO:0013979","xrefs":{"Monarch":{"xref_id":"0013979"}}}


id: SO:0001249
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A fragment assembly is a genome assembly that orders overlapping fragments of the genome based on landmark sequences. The base pair distance between the landmarks is known allowing additivity of lengths.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly","termid":"SO:0001248"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragment_assembly","synonyms":[{"name":"fragment assembly","type":"exact"},{"name":"physical map","type":"exact"}],"termid":"SO:0001249"}


id: GO:0016171
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cell surface antigen (obsolete GO:0016171)","synonyms":[{"name":"cell surface antigen","type":"exact"}],"termid":"GO:0016171"}


id: MONDO:0033969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease-recurrent sinopulmonary infections syndrome","secondary_identifiers":["Orphanet:529980","GARD:22205","MEDGEN:1799955","UMLS:C5568532"],"termid":"MONDO:0033969","xrefs":{"Monarch":{"xref_id":"0033969"}}}


id: GO:0015049
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methane + NAD(P)H + H+ + O2 = methanol + NAD(P)+ + H2O.","definition_xrefs":["EC:1.14.13.25","PMID:10896210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"methane monooxygenase [NAD(P)H] activity","secondary_identifiers":["UM-BBD_enzymeID:r0237","MetaCyc:METHANE-MONOOXYGENASE-RXN"],"synonyms":[{"name":"methane hydroxylase activity","type":"related"},{"name":"methane,NAD(P)H:oxygen oxidoreductase (hydroxylating)","type":"related"}],"termid":"GO:0015049"}


id: GO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter uptake","termid":"GO:0051580"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"}],"termid":"GO:0051940"}


id: PBO:0087346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sphingoid long-chain base kinase; responsible for synthesis of long-chain base phosphates, which function as signaling molecules, regulates synthesis of ceramide from exogenous long-chain bases, localizes to the Golgi and late endosomes; LCB4 has a paralog, LCB5, that arose from the whole genome duplication","termid":"PBO:0087346"}


id: MONDO:0001206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma","termid":"MONDO:0005041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"aqueous misdirection","secondary_identifiers":["UMLS:C1135189","ICD9:365.83","DOID:11149","MEDGEN:1843475","ICD10CM:H40.83"],"termid":"MONDO:0001206","xrefs":{"Monarch":{"xref_id":"0001206"}}}


id: GO:0021780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a glial cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"glial cell fate commitment","termid":"GO:0021781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell fate specification","termid":"GO:0021780"}


id: PBO:0056804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter A, lysophospholipid","termid":"PBO:0056804"}


id: PBO:0088276
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II complex TFIIS subunit Rpb9","termid":"PBO:0088276"}


id: MONDO:0002746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the fallopian tube","direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"fallopian tube carcinoma","termid":"MONDO:0006206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"fallopian tube adenocarcinoma","secondary_identifiers":["NCIT:C6265","DOID:3706","MEDGEN:232183","UMLS:C1333590"],"synonyms":[{"name":"adenocarcinoma of fallopian tube","type":"exact"},{"name":"adenocarcinoma of the fallopian tube","type":"exact"},{"name":"fallopian tube adenocarcinoma","type":"exact"}],"termid":"MONDO:0002746","xrefs":{"Monarch":{"xref_id":"0002746"}}}


id: PBO:0012226
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-type cyclin pombe","termid":"PBO:0012226"}


id: PBO:0110828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor zf-C2H2 type, Loz1","termid":"PBO:0110828"}


id: GO:0151001
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A dense cluster of elongated, thick microvilli on the apical surface of tuft cells in epithelial tissues, such as the intestine and respiratory tract. The apical tuft extends further into the lumen than typical microvilli, featuring larger, more compact projections with unique actin cores that penetrate deep into the cytoplasm, often reaching the perinuclear region. This distinctive structure, rich in microfilaments and microtubules, supports the chemosensory functions of the cell.","definition_xrefs":["PMID:15817800","PMID:35237268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cluster of actin-based cell projections","termid":"GO:0098862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tuft","termid":"GO:0151001"}


id: GO:0060237
data:
  {"annotated_genes":["SJAG_01181","SJAG_04462","SJAG_00163"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73500,89602,113034],"is_not":false,"summary":null,"term":"GO:0060237"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of the formation, arrangement of constituent parts, or disassembly of the fungal-type cell wall.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"is_a","term_name":"regulation of cell wall organization or biogenesis","termid":"GO:1903338"},{"relation_name":"regulates","term_name":"fungal-type cell wall organization","termid":"GO:0031505"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00163":null,"SJAG_01181":null,"SJAG_04462":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"regulation of fungal-type cell wall organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of fungal-type cell wall organisation","type":"exact"},{"name":"regulation of fungal-type cell wall organization and biogenesis","type":"related"}],"termid":"GO:0060237","terms_by_termid":{"GO:0060237":null}}


id: GO:0098764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A meiotic cell cycle phase prior to a during which some part of meiosis I nuclear division or the proceeding cytokinesis occurs.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle phase","termid":"GO:0098762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiosis I cell cycle phase","termid":"GO:0098764"}


id: PBO:0073725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLAM family member 6 pseudogene 1","termid":"PBO:0073725"}


id: PBO:0084484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis specific DNA helicase; involved in the conversion of double-stranded breaks to later recombination intermediates and in crossover control; catalyzes the unwinding of Holliday junctions; has ssDNA and dsDNA stimulated ATPase activity","termid":"PBO:0084484"}


id: PBO:0073895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 13 member 1","termid":"PBO:0073895"}


id: PBO:0113351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for nuclear envelope integrity; involved in distribution of nuclear pore complexes; interacts with Ulp1p, a Ubl (ubiquitin-like protein)-specific protease for Smt3p protein conjugates; detected in a phosphorylated state in the mitochondrial outer membrane; also detected in ER and nuclear envelope","termid":"PBO:0113351"}


id: PBO:0073427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SF3A2 pseudogene 1","termid":"PBO:0073427"}


id: PBO:0064370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomannomutase 2 pseudogene 2","termid":"PBO:0064370"}


id: PBO:0055984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat transmembrane neuronal 2","termid":"PBO:0055984"}


id: PBO:0090301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase Rrp8","termid":"PBO:0090301"}


id: PBO:0061351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 9","termid":"PBO:0061351"}


id: PBO:0059748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 22","termid":"PBO:0059748"}


id: PBO:0079898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase, complex III subunit X","termid":"PBO:0079898"}


id: PBO:0034353
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_postdisplacement_relationship_with","termid":"PBO:0034353"}


id: MONDO:0015503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nose and cavum anomaly (obsolete MONDO:0015503)","secondary_identifiers":["Orphanet:156246","icd11.foundation:484839707"],"termid":"MONDO:0015503","xrefs":{"Monarch":{"xref_id":"0015503"}}}


id: GO:0140445
data:
  {"annotated_genes":["SJAG_04201","SJAG_02778","SJAG_04186","SJAG_02194","SJAG_02908","SJAG_03287","SJAG_04140","SJAG_00640","SJAG_02116","SJAG_03128","SJAG_04700","SJAG_01698","SJAG_03844","SJAG_02362","SJAG_00378","SJAG_00934","SJAG_03780","SJAG_03460","SJAG_02771","SJAG_06642","SJAG_00364","SJAG_04372","SJAG_03356","SJAG_04205","SJAG_01837","SJAG_00939","SJAG_03982","SJAG_05173","SJAG_02563","SJAG_04245","SJAG_03048","SJAG_00676","SJAG_01864","SJAG_02348","SJAG_05239","SJAG_03298","SJAG_05979","SJAG_05353","SJAG_01378","SJAG_04183","SJAG_04400","SJAG_01675","SJAG_04097","SJAG_05260","SJAG_02872","SJAG_00884","SJAG_02818","SJAG_03855","SJAG_03722","SJAG_04190","SJAG_02768","SJAG_03092","SJAG_01377","SJAG_06560","SJAG_02863","SJAG_04150","SJAG_05105","SJAG_00293","SJAG_03685","SJAG_01605","SJAG_01777","SJAG_03026","SJAG_04863","SJAG_02576","SJAG_02212","SJAG_05372","SJAG_06597","SJAG_00429","SJAG_05373","SJAG_04586","SJAG_02621","SJAG_03720"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73001,89399,90547,91124,92634,93433,94079,94531,99426,100287,101196,101468,101567,101936,102877,103153,104359,106161,106196,108171,108642,109375,110152,110190,111143,112258,113237,113583,113775,114151,114563,114880,114930,114980,114981,114982,114983,114984,115339,118305,118373,120156,120696,58043,58736,59179,59320,59782,59996,60469,60718,61059,62332,64975,67557,67676,67889,68937,71167,71258,71542,79148,118720],"is_not":false,"summary":null,"term":"GO:0140445"},{"annotations":[64506,112419],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990879"},{"annotations":[81796,118000,93850,101734,91773,97100],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070187"},{"annotations":[109969],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000782"}]},"cv_name":"cellular_component","definition":"A complex of DNA and protein that seals the end of a chromosome. The telomeric repeat DNA consists of simple tandemly repeated sequences specific for each species. Typically one strand is G-rich and the other C-rich. The G-rich strand forms a 3'-terminal overhang, the length of which varies with species. The single strand overhang is bound by a variety of proteins, including telomere capping proteins that bind to the single-stranded DNA and seal the telomeric loop.","definition_xrefs":["PMID:11352055","PMID:30208292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome, telomeric region","termid":"GO:0000781"}],"gene_count":72,"genes_by_uniquename":{"SJAG_00293":null,"SJAG_00364":null,"SJAG_00378":null,"SJAG_00429":null,"SJAG_00640":null,"SJAG_00676":null,"SJAG_00884":null,"SJAG_00934":null,"SJAG_00939":null,"SJAG_01377":null,"SJAG_01378":null,"SJAG_01605":null,"SJAG_01675":null,"SJAG_01698":null,"SJAG_01777":null,"SJAG_01837":null,"SJAG_01864":null,"SJAG_02116":null,"SJAG_02194":null,"SJAG_02212":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02563":null,"SJAG_02576":null,"SJAG_02621":null,"SJAG_02768":null,"SJAG_02771":null,"SJAG_02778":null,"SJAG_02818":null,"SJAG_02863":null,"SJAG_02872":null,"SJAG_02908":null,"SJAG_03026":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03128":null,"SJAG_03287":null,"SJAG_03298":null,"SJAG_03356":null,"SJAG_03460":null,"SJAG_03685":null,"SJAG_03720":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03844":null,"SJAG_03855":null,"SJAG_03982":null,"SJAG_04097":null,"SJAG_04140":null,"SJAG_04150":null,"SJAG_04183":null,"SJAG_04186":null,"SJAG_04190":null,"SJAG_04201":null,"SJAG_04205":null,"SJAG_04245":null,"SJAG_04372":null,"SJAG_04400":null,"SJAG_04586":null,"SJAG_04700":null,"SJAG_04863":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05239":null,"SJAG_05260":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_05373":null,"SJAG_05979":null,"SJAG_06560":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"chromosome, telomeric repeat region","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0140445","terms_by_termid":{"GO:0000782":null,"GO:0070187":null,"GO:0140445":null,"GO:1990879":null}}


id: PR:Q92359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf4 gene.","definition_xrefs":["UniProtKB:Q92359","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C6G9.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6G9.14","synonyms":[{"name":"Spom972h-puf4","type":"exact"}],"termid":"PR:Q92359"}


id: GO:0032007
data:
  {"annotated_genes":["SJAG_01142","SJAG_04249","SJAG_00824","SJAG_00875","SJAG_00457","SJAG_00289","SJAG_02231","SJAG_02765","SJAG_03355","SJAG_03072","SJAG_00169","SJAG_01983","SJAG_04910","SJAG_01184","SJAG_00209","SJAG_03974","SJAG_00991","SJAG_02389","SJAG_05346","SJAG_04206","SJAG_03501","SJAG_03089","SJAG_03678","SJAG_03486","SJAG_03799"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75122],"is_not":false,"summary":null,"term":"GO:0032007"},{"annotations":[119108,111312,90029,100890,118189,116634,118544,120302,75501,109182,105029,111718,120108,101586,115215,107160,98112,81864,75608,95337,103475,63143,116034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904262"},{"annotations":[118335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903940"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of TOR signaling.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TOR signaling","termid":"GO:0032006"},{"relation_name":"is_a","term_name":"negative regulation of intracellular signal transduction","termid":"GO:1902532"},{"relation_name":"negatively_regulates","term_name":"TOR signaling","termid":"GO:0031929"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00289":null,"SJAG_00457":null,"SJAG_00824":null,"SJAG_00875":null,"SJAG_00991":null,"SJAG_01142":null,"SJAG_01184":null,"SJAG_01983":null,"SJAG_02231":null,"SJAG_02389":null,"SJAG_02765":null,"SJAG_03072":null,"SJAG_03089":null,"SJAG_03355":null,"SJAG_03486":null,"SJAG_03501":null,"SJAG_03678":null,"SJAG_03799":null,"SJAG_03974":null,"SJAG_04206":null,"SJAG_04249":null,"SJAG_04910":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of TOR signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"down regulation of TOR signaling pathway","type":"exact"},{"name":"down-regulation of TOR signaling pathway","type":"exact"},{"name":"downregulation of TOR signaling pathway","type":"exact"},{"name":"inhibition of TOR signaling pathway","type":"narrow"},{"name":"negative regulation of TOR signaling cascade","type":"related"},{"name":"negative regulation of TOR signaling pathway","type":"exact"},{"name":"negative regulation of TOR signalling pathway","type":"exact"},{"name":"negative regulation of target of rapamycin signaling pathway","type":"exact"},{"name":"negative regulation of target of rapamycin signalling pathway","type":"exact"}],"termid":"GO:0032007","terms_by_termid":{"GO:0032007":null,"GO:1903940":null,"GO:1904262":null}}


id: FYPO:0002352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule disassembly begins later than normal.","definition_xrefs":["PMID:21098141","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal stress granule disassembly","termid":"FYPO:0002351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of stress granule disassembly","synonyms":[{"name":"delayed onset of cytoplasmic stress granule disassembly","type":"exact"},{"name":"delayed onset of stress granule disassembly during mitotic cell cycle","type":"related"},{"name":"delayed onset of stress granule disassembly during vegetative growth","type":"exact"},{"name":"delayed stress granule disassembly","type":"exact"}],"termid":"FYPO:0002352"}


id: GO:0019885
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC class I protein complex. The peptide antigen is typically, but not always, processed from a whole protein. Class I here refers to classical class I molecules.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"},{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous peptide antigen","termid":"GO:0002483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen via MHC class I","secondary_identifiers":["GO:0048004"],"synonyms":[{"name":"antigen presentation, endogenous peptide antigen","type":"broad"},{"name":"antigen processing, endogenous antigen via MHC class I","type":"broad"},{"name":"antigen processing, endogenous antigen via major histocompatibility complex class I","type":"broad"},{"name":"endogenous peptide antigen processing and presentation via MHC class I","type":"exact"}],"termid":"GO:0019885"}


id: MONDO:0000312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete enlarged vestibular aqueduct (obsolete MONDO:0000312)","termid":"MONDO:0000312","xrefs":{"Monarch":{"xref_id":"0000312"}}}


id: GO:0051300
data:
  {"annotated_genes":["SJAG_03915","SJAG_01805","SJAG_04781","SJAG_04745","SJAG_04003","SJAG_04558","SJAG_00719","SJAG_03200","SJAG_04901","SJAG_02529","SJAG_00794","SJAG_03544","SJAG_02795","SJAG_01760","SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91657,97386],"is_not":false,"summary":null,"term":"GO:0051300"},{"annotations":[97323],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140456"},{"annotations":[79763,97324,77767],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"},{"annotations":[95810,117184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990395"},{"annotations":[114697,109464,114900,117185,92137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"},{"annotations":[100284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905047"},{"annotations":[93306,98882,115990],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902441"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the spindle pole body (SPB). The SPB is the microtubule organizing center in fungi, and is functionally homologous to the animal cell centrosome.","definition_xrefs":["GOC:mah","GOC:ai","GOC:jl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"microtubule organizing center organization","termid":"GO:0031023"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00719":null,"SJAG_00773":null,"SJAG_00794":null,"SJAG_01760":null,"SJAG_01805":null,"SJAG_02529":null,"SJAG_02795":null,"SJAG_03200":null,"SJAG_03544":null,"SJAG_03915":null,"SJAG_04003":null,"SJAG_04558":null,"SJAG_04745":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"spindle pole body organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0051426"],"synonyms":[{"name":"SPB maturation","type":"related"},{"name":"SPB organization","type":"exact"},{"name":"spindle pole body maturation","type":"related"},{"name":"spindle pole body organisation","type":"exact"},{"name":"spindle pole body organization and biogenesis","type":"related"}],"termid":"GO:0051300","terms_by_termid":{"GO:0000073":null,"GO:0051300":null,"GO:0140456":null,"GO:1902441":null,"GO:1903087":null,"GO:1905047":null,"GO:1990395":null}}


id: PBO:0035776
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_during_nitrogen_starvation","termid":"PBO:0035776"}


id: GO:0061323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population that contributes to the shaping of the heart.","definition_xrefs":["GOC:dph","GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation involved in heart morphogenesis","termid":"GO:0061323"}


id: PBO:0040912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 16","termid":"PBO:0040912"}


id: MONDO:0018531
data:
  {"annotated_genes":["SJAG_02049"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"}]},"cv_name":"mondo","definition":"A carcinoma that arises from the hepatocytes or intrahepatic bile ducts. The main subtypes are hepatocellular carcinoma (hepatoma) and cholangiocarcinoma.","definition_xrefs":["NCIT:C7927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver cancer","termid":"MONDO:0002691"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02049":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"carcinoma of liver and intrahepatic biliary tract","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:21786","ONCOTREE:HCCIHCH","Orphanet:424936","MEDGEN:78921","UMLS:C0279000"],"synonyms":[{"name":"cancer of liver","type":"broad"},{"name":"cancer of liver and intrahepatic biliary tract","type":"broad"},{"name":"cancer of the liver","type":"broad"},{"name":"cancer of the liver and intrahepatic biliary tract","type":"broad"},{"name":"carcinoma of liver","type":"broad"},{"name":"carcinoma of liver and IBT","type":"exact"},{"name":"hepatic cancer","type":"broad"},{"name":"hepatocellular carcinoma plus intrahepatic cholangiocarcinoma","type":"related"},{"name":"liver and intrahepatic bile duct cancer","type":"broad"},{"name":"liver and intrahepatic bile duct carcinoma","type":"exact"},{"name":"liver and intrahepatic biliary tract cancer","type":"exact"},{"name":"liver and intrahepatic biliary tract carcinoma","type":"exact"},{"name":"liver cancer","type":"broad"},{"name":"liver carcinoma","type":"broad"},{"name":"liver/hepatobiliary cancer","type":"broad"},{"name":"primary liver carcinoma","type":"exact"}],"termid":"MONDO:0018531","terms_by_termid":{"MONDO:0007256":null},"xrefs":{"Monarch":{"xref_id":"0018531"}}}


id: PBO:0031505
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_K-252a","termid":"PBO:0031505"}


id: MONDO:0018031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Granulomatous slack skin (GSS) is a variant of mycosis fungoides (MF), a form of cutaneous T-cell lymphoma, and is characterized by the presence of circumscribed areas of pendulous lax skin.","definition_xrefs":["Orphanet:33111"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mycosis fungoides variant","termid":"MONDO:0045071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"granulomatous slack skin disease","secondary_identifiers":["NCIT:C35464","SCTID:277796003","GARD:10986","ICD10CM:C84.0","UMLS:C0457002","MEDGEN:99139"],"synonyms":[{"name":"granulomatous slack skin","type":"exact"}],"termid":"MONDO:0018031","xrefs":{"Monarch":{"xref_id":"0018031"}}}


id: PBO:0066652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD50 interactor 1","termid":"PBO:0066652"}


id: MONDO:0850058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Niemann-Pick disease","termid":"MONDO:0001982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0002561","MONDO:0005066","MONDO:0005046"],"is_obsolete":false,"name":"chronic neurovisceral acid sphingomyelinase deficiency","secondary_identifiers":["ICD10CM:E75.244","MEDGEN:1842316","UMLS:C5539139","Orphanet:618891","GARD:22456"],"termid":"MONDO:0850058","xrefs":{"Monarch":{"xref_id":"0850058"}}}


id: GO:0008813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: chorismate = 4-hydroxybenzoate + pyruvate.","definition_xrefs":["EC:4.1.3.40","RHEA:16505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxo-acid-lyase activity","termid":"GO:0016833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"chorismate lyase activity","secondary_identifiers":["KEGG_REACTION:R01302","MetaCyc:CHORPYRLY-RXN"],"synonyms":[{"name":"4-hydroxybenzoate synthetase activity","type":"exact"},{"name":"CL","type":"related"},{"name":"CPL","type":"related"},{"name":"UbiC","type":"related"},{"name":"chorismate pyruvate lyase activity","type":"exact"},{"name":"chorismate pyruvate-lyase (4-hydroxybenzoate-forming) activity","type":"related"}],"termid":"GO:0008813"}


id: GO:0031486
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XVI myosin heavy chains and associated light chains; myosin XVI heavy chains contain ankyrin repeat.","definition_xrefs":["PMID:32451869","PMID:11294886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0015629"],"is_obsolete":false,"name":"myosin XVI complex","termid":"GO:0031486"}


id: PBO:0003839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-isopropylmalate dehydrogenase Leu1","termid":"PBO:0003839"}


id: PBO:0062246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BM member 1 pseudogene","termid":"PBO:0062246"}


id: GO:0051222
data:
  {"annotated_genes":["SJAG_04464","SJAG_03453","SJAG_04312","SJAG_03048","SJAG_01805","SJAG_01245","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102461,103871,95818,113067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046827"},{"annotations":[92857,96382,104401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042307"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of a protein into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of protein transport","termid":"GO:0051223"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"is_a","term_name":"positive regulation of establishment of protein localization","termid":"GO:1904951"},{"relation_name":"positively_regulates","term_name":"protein transport","termid":"GO:0015031"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01245":null,"SJAG_01805":null,"SJAG_02592":null,"SJAG_03048":null,"SJAG_03453":null,"SJAG_04312":null,"SJAG_04464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of protein transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of protein transport","type":"narrow"},{"name":"stimulation of protein transport","type":"narrow"},{"name":"up regulation of protein transport","type":"exact"},{"name":"up-regulation of protein transport","type":"exact"},{"name":"upregulation of protein transport","type":"exact"}],"termid":"GO:0051222","terms_by_termid":{"GO:0042307":null,"GO:0046827":null}}


id: MONDO:0024982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections in animals with bacteria of the genus salmonella.","definition_xrefs":["MESH:D012481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease, non-human animal","termid":"MONDO:0700050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"salmonella infections, animal","synonyms":[{"name":"Salmonella infection, animal","type":"related"},{"name":"animal Salmonella infection","type":"related"},{"name":"animal Salmonella infections","type":"related"},{"name":"infection, animal Salmonella","type":"related"},{"name":"infections, animal Salmonella","type":"related"},{"name":"salmonellosis, non-human animal","type":"exact"}],"termid":"MONDO:0024982","xrefs":{"Monarch":{"xref_id":"0024982"}}}


id: PBO:0043577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XI alpha 1 chain","termid":"PBO:0043577"}


id: FYPO:0003420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glutathione (GSH) measured in a cell is higher than normal during a cellular response to cadmium.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular glutathione level during vegetative growth","termid":"FYPO:0001521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased cellular glutathione level during cellular response to cadmium ion","synonyms":[{"name":"increased cellular GSH level during cellular response to cadmium","type":"exact"},{"name":"increased cellular L-gamma-glutamyl-L-cysteinylglycine level during cellular response to cadmium","type":"exact"},{"name":"increased cellular glutathione level during cellular response to cadmium","type":"exact"},{"name":"increased cellular glutathione level during cellular response to cadmium during mitotic cell cycle","type":"related"},{"name":"increased cellular glutathione level during cellular response to cadmium during vegetative growth","type":"exact"},{"name":"increased cellular reduced glutathione level during cellular response to cadmium","type":"exact"},{"name":"increased glutathione accumulation during cellular response to cadmium","type":"related"}],"termid":"FYPO:0003420"}


id: PATO:0002212
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's being small or narrow in circumference or width in proportion to length or height.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/slender"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"slender","synonyms":[{"name":"gracile","type":"related"}],"termid":"PATO:0002212"}


id: GO:0033358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of UDP-L-arabinose, uridinediphosphoarabinose, a substance composed of arabinose in glycosidic linkage with uridine diphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"UDP-L-arabinose metabolic process","termid":"GO:0033356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"UDP-L-arabinose biosynthetic process","synonyms":[{"name":"UDP-L-arabinose anabolism","type":"exact"},{"name":"UDP-L-arabinose biosynthesis","type":"exact"},{"name":"UDP-L-arabinose formation","type":"exact"},{"name":"UDP-L-arabinose synthesis","type":"exact"}],"termid":"GO:0033358"}


id: MONDO:0014806
data:
  {"annotated_genes":["SJAG_02096"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87783],"is_not":false,"summary":null,"term":"MONDO:0014806"}]},"cv_name":"mondo","definition":"Any prenatal-onset spinal muscular atrophy with congenital bone fractures in which the cause of the disease is a mutation in the TRIP4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenatal-onset spinal muscular atrophy with congenital bone fractures","termid":"MONDO:0000209"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002320"],"is_obsolete":false,"name":"spinal muscular atrophy with congenital bone fractures 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:271225","OMIM:616866","UMLS:C4225177","GARD:4947","MEDGEN:896011","MESH:C564805"],"synonyms":[{"name":"SMA1 with congenital bone fractures","type":"related"},{"name":"SMABF1","type":"exact"},{"name":"TRIP4 prenatal-onset spinal muscular atrophy with congenital bone fractures","type":"exact"},{"name":"prenatal-onset spinal muscular atrophy with congenital bone fractures caused by mutation in TRIP4","type":"exact"},{"name":"spinal muscular atrophy type 1 with congenital bone fractures","type":"related"},{"name":"spinal muscular atrophy with congenital bone fractures 1","type":"exact"},{"name":"spinal muscular atrophy with congenital bone fractures type 1","type":"exact"},{"name":"spinal muscular atrophy, type I, with congenital bone fractures","type":"exact"}],"termid":"MONDO:0014806","terms_by_termid":{"MONDO:0014806":null},"xrefs":{"Monarch":{"xref_id":"0014806"}}}


id: PBO:0080284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 47 pseudogene","termid":"PBO:0080284"}


id: GO:0018596
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dimethylsilanediol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylmethylsilanediol.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dimethylsilanediol hydroxylase activity (obsolete GO:0018596)","synonyms":[{"name":"DMSD hydroxylase activity","type":"exact"}],"termid":"GO:0018596"}


id: MONDO:0010701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete opticoacoustic nerve atrophy with dementia (obsolete MONDO:0010701)","termid":"MONDO:0010701","xrefs":{"Monarch":{"xref_id":"0010701"}}}


id: GO:0009447
data:
  {"annotated_genes":["SJAG_03288"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89410],"is_not":false,"summary":null,"term":"GO:0009447"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of putrescine, 1,4-diaminobutane; putrescine is the metabolic precursor of spermidine and spermine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"putrescine metabolic process","termid":"GO:0009445"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03288":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"putrescine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"putrescine breakdown","type":"exact"},{"name":"putrescine catabolism","type":"exact"},{"name":"putrescine degradation","type":"exact"}],"termid":"GO:0009447","terms_by_termid":{"GO:0009447":null}}


id: FYPO:0006087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA resection does not occur upstream of a stalled replication fork. DNA resection is the 5'-to-3' degradation of one strand of DNA, leaving a stretch of single-stranded DNA.","definition_xrefs":["PomBase:mah","PMID:28475874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abolished DNA resection during replication fork processing","synonyms":[{"name":"DNA resection during replication fork processing abolished","type":"exact"},{"name":"abolished DNA resection during replication fork processing during mitotic cell cycle","type":"related"},{"name":"abolished DNA resection during replication fork processing during vegetative growth","type":"exact"},{"name":"abolished DNA resectioning during replication fork processing","type":"exact"},{"name":"abolished exonucleolytic DNA cleavage during replication fork processing","type":"exact"}],"termid":"FYPO:0006087"}


id: PBO:0027165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_sporulation_resulting_in_formation_of_azygotic_ascus_with_more_than_four_spores","termid":"PBO:0027165"}


id: PBO:0048790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha i2 pseudogene 1","termid":"PBO:0048790"}


id: PBO:0027678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitochondrial_translation","termid":"PBO:0027678"}


id: GO:0005839
data:
  {"annotated_genes":["SJAG_04541","SJAG_00778","SJAG_05316","SJAG_04306","SJAG_02562","SJAG_01014","SJAG_02502","SJAG_04229","SJAG_04888","SJAG_00128","SJAG_04357","SJAG_04969","SJAG_00808","SJAG_03151"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71759,77111,77512,80340,73865,74462,74999],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019773"},{"annotations":[62613,65585,71387,64697,62124,57588,57780],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0019774"}]},"cv_name":"cellular_component","definition":"A multisubunit barrel shaped endoprotease complex, which is the core of the proteasome complex.","definition_xrefs":["GOC:rb","PMID:10806206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"proteasome complex","termid":"GO:0000502"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00128":null,"SJAG_00778":null,"SJAG_00808":null,"SJAG_01014":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_03151":null,"SJAG_04229":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_04541":null,"SJAG_04888":null,"SJAG_04969":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome core complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0000503"],"synonyms":[{"name":"20S core complex","type":"narrow"},{"name":"20S proteasome","type":"narrow"},{"name":"PA28gamma-20S proteasome","type":"narrow"},{"name":"macropain","type":"exact"}],"termid":"GO:0005839","terms_by_termid":{"GO:0019773":null,"GO:0019774":null}}


id: GO:0140222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The enclosed volume within the sealed membrane of a pathogen-containing vacuole.","definition_xrefs":["PMID:26842840","PMID:10560000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane-enclosed lumen","termid":"GO:0031974"},{"relation_name":"part_of","term_name":"pathogen-containing vacuole","termid":"GO:0140220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pathogen-containing vacuole lumen","synonyms":[{"name":"lumen of a pathogen-containing vacuole","type":"exact"},{"name":"pathogen inclusion lumen","type":"related"},{"name":"pathogen-containing compartment lumen","type":"exact"},{"name":"pathogen-containing vacuolar lumen","type":"exact"}],"termid":"GO:0140222"}


id: PBO:0067011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 19, pseudogene","termid":"PBO:0067011"}


id: MONDO:0700142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemangiosarcoma occurring in a dog. It is an incurable tumor of vascular endothelial cells and occurs more commonly in dogs beyond middle age, and is especially common in certain breeds. Most hemangiosarcomas do not have a known cause.","definition_xrefs":["NCIT:C122783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine soft tissue sarcoma","termid":"MONDO:0700156"},{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"},{"relation_name":"is_a","term_name":"hemangiosarcoma, non-human animal","termid":"MONDO:1011823"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine hemangiosarcoma","secondary_identifiers":["OMIA:001813-9615"],"termid":"MONDO:0700142","xrefs":{"Monarch":{"xref_id":"0700142"}}}


id: MONDO:0043209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital disorder characterized by partial or complete absence of melanin pigment in the eyes, hair, or skin.","definition_xrefs":["NCIT:C84543-modified"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic skin disease (obsolete MONDO:0024255)","termid":"MONDO:0024255"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"albinism","secondary_identifiers":["ICD10CM:E70.3","MESH:D000417","NCIT:C84543","GARD:5768","SCTID:15890002","UMLS:C0001916","MEDGEN:182"],"synonyms":[{"name":"albinism","type":"exact"}],"termid":"MONDO:0043209","xrefs":{"Monarch":{"xref_id":"0043209"}}}


id: PBO:0047649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 4 pseudogene 2","termid":"PBO:0047649"}


id: PBO:0048931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi phosphoprotein 3","termid":"PBO:0048931"}


id: PBO:0042470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle associated 7 like","termid":"PBO:0042470"}


id: PBO:0064791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase, Mg2+/Mn2+ dependent 1K","termid":"PBO:0064791"}


id: GO:0141194
data:
  {"annotated_genes":["SJAG_04030","SJAG_02725","SJAG_02594","SJAG_00756","SJAG_04061","SJAG_01008","SJAG_01540","SJAG_05247","SJAG_03916","SJAG_01601","SJAG_02119","SJAG_03193","SJAG_00414","SJAG_04574","SJAG_00087","SJAG_03689","SJAG_01331","SJAG_00058","SJAG_01062","SJAG_02409","SJAG_03042","SJAG_04253","SJAG_03680","SJAG_03356","SJAG_02621","SJAG_04141"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116049],"is_not":false,"summary":null,"term":"GO:0141194"},{"annotations":[108338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902795"},{"annotations":[96104,120900,93283,120169,119765,98742,101580,90784,113264,115731,116626,117486,108583,97352,112538,114269,112706,101140,116367,120050,90841,118047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140727"},{"annotations":[95723,101141,111738],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140185"}]},"cv_name":"biological_process","definition":"The formation of heterochromatin into a heterochromatin domain by a process mediated by a small interfering siRNA.","definition_xrefs":["GOC:pg","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory ncRNA-mediated heterochromatin formation","termid":"GO:0031048"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00087":null,"SJAG_00414":null,"SJAG_00756":null,"SJAG_01008":null,"SJAG_01062":null,"SJAG_01331":null,"SJAG_01540":null,"SJAG_01601":null,"SJAG_02119":null,"SJAG_02409":null,"SJAG_02594":null,"SJAG_02621":null,"SJAG_02725":null,"SJAG_03042":null,"SJAG_03193":null,"SJAG_03356":null,"SJAG_03680":null,"SJAG_03689":null,"SJAG_03916":null,"SJAG_04030":null,"SJAG_04061":null,"SJAG_04141":null,"SJAG_04253":null,"SJAG_04574":null,"SJAG_05247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325"],"is_obsolete":false,"name":"siRNA-mediated heterochromatin formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0141194","terms_by_termid":{"GO:0140185":null,"GO:0140727":null,"GO:0141194":null,"GO:1902795":null}}


id: GO:0052790
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: chitooligosaccharide with N-acetylglucosamine at nonreducing terminal + H2O = chitooligosaccharide with glucosamine at nonreducing terminal + acetate. This reaction is the deacetylation of a chitooligosaccharide at the nonreducing N-acetylglucosamine residue; chitooligosaccharide are composed of (1->4)-linked D-glucosamine (GlcN) and N-acetyl-D-glucosamine (GlcNAc) in varying proportions.","definition_xrefs":["PMID:8986807","GOC:mengo_curators","PMID:8421697"],"gene_count":0,"genotype_count":0,"name":"obsolete chitooligosaccharide deacetylase activity (obsolete GO:0052790)","termid":"GO:0052790"}


id: CHEBI:26271
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline","termid":"CHEBI:26271"}


id: PBO:0064887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 2 regulatory subunit Bbeta","termid":"PBO:0064887"}


id: FYPO:0006958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 2-oxoglutarate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular 2-oxoglutarate level","synonyms":[{"name":"increased 2-oxoglutarate accumulation","type":"related"},{"name":"increased cellular 2-oxoglutarate level during mitotic cell cycle","type":"related"},{"name":"increased cellular 2-oxoglutarate level during vegetative growth","type":"exact"}],"termid":"FYPO:0006958"}


id: MONDO:0957875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant 11","secondary_identifiers":["DOID:0081400","OMIM:620528","UMLS:C5882697","MEDGEN:1849676"],"termid":"MONDO:0957875","xrefs":{"Monarch":{"xref_id":"0957875"}}}


id: GO:0022601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of physiological phases, occurring in the endometrium during the menstrual cycle that recur at regular intervals during the reproductive years. The menstrual cycle is an ovulation cycle where the endometrium is shed if pregnancy does not occur.","definition_xrefs":["GOC:isa_complete","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"menstrual cycle phase","termid":"GO:0022601"}


id: PBO:0032702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9K14_acetylation","termid":"PBO:0032702"}


id: GO:0001068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a RNA region within the transcript that regulates the transcription of a gene, cistron, or operon.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory region RNA binding","termid":"GO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"transcription regulatory region RNA binding","termid":"GO:0001068"}


id: FYPO:0002665
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide-serine-N-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"}


id: PBO:0016992
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein, flocculin, related to Gsf2","termid":"PBO:0016992"}


id: PBO:0057148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 296","termid":"PBO:0057148"}


id: PBO:0059929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 15","termid":"PBO:0059929"}


id: GO:1900669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endocrocin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of endocrocin biosynthetic process","termid":"GO:1900667"},{"relation_name":"positively_regulates","term_name":"endocrocin biosynthetic process","termid":"GO:1900602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of endocrocin biosynthetic process","synonyms":[{"name":"activation of endocrocin anabolism","type":"exact"},{"name":"activation of endocrocin biosynthesis","type":"exact"},{"name":"activation of endocrocin biosynthetic process","type":"narrow"},{"name":"activation of endocrocin formation","type":"exact"},{"name":"activation of endocrocin synthesis","type":"exact"},{"name":"positive regulation of endocrocin anabolism","type":"exact"},{"name":"positive regulation of endocrocin biosynthesis","type":"exact"},{"name":"positive regulation of endocrocin formation","type":"exact"},{"name":"positive regulation of endocrocin synthesis","type":"exact"},{"name":"up regulation of endocrocin anabolism","type":"exact"},{"name":"up regulation of endocrocin biosynthesis","type":"exact"},{"name":"up regulation of endocrocin biosynthetic process","type":"exact"},{"name":"up regulation of endocrocin formation","type":"exact"},{"name":"up regulation of endocrocin synthesis","type":"exact"},{"name":"up-regulation of endocrocin anabolism","type":"exact"},{"name":"up-regulation of endocrocin biosynthesis","type":"exact"},{"name":"up-regulation of endocrocin biosynthetic process","type":"exact"},{"name":"up-regulation of endocrocin formation","type":"exact"},{"name":"up-regulation of endocrocin synthesis","type":"exact"},{"name":"upregulation of endocrocin anabolism","type":"exact"},{"name":"upregulation of endocrocin biosynthesis","type":"exact"},{"name":"upregulation of endocrocin biosynthetic process","type":"exact"},{"name":"upregulation of endocrocin formation","type":"exact"},{"name":"upregulation of endocrocin synthesis","type":"exact"}],"termid":"GO:1900669"}


id: FYPO:0000290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle that affects DNA-dependent transcription.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000294"],"is_obsolete":false,"name":"transcription phenotype during vegetative growth","synonyms":[{"name":"transcription phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000290"}


id: MONDO:0956967
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma non-WNT/non-SHH that is characterized as a molecular subtype by the absence of MYC amplifications and TP53 mutations, while chromosome 17 abnormalities may be present.","definition_xrefs":["DOID:0080708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma non-WNT/non-SHH","termid":"MONDO:0850198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma non-WNT/non-SHH group 4","secondary_identifiers":["MEDGEN:1377534","NCIT:C129446","UMLS:C4330666"],"termid":"MONDO:0956967","xrefs":{"Monarch":{"xref_id":"0956967"}}}


id: PBO:0073189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein T","termid":"PBO:0073189"}


id: PBO:0004588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCNA","termid":"PBO:0004588"}


id: GO:0030823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving cGMP.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cGMP metabolic process (obsolete GO:0030823)","synonyms":[{"name":"regulation of cGMP metabolism","type":"exact"}],"termid":"GO:0030823"}


id: PBO:0042981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain helicase DNA binding protein 7","termid":"PBO:0042981"}


id: GO:0002840
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a T cell mediated immune response to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immunity","termid":"GO:0002709"},{"relation_name":"is_a","term_name":"regulation of immune response to tumor cell","termid":"GO:0002837"},{"relation_name":"regulates","term_name":"T cell mediated immune response to tumor cell","termid":"GO:0002424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell mediated immune response to tumor cell","synonyms":[{"name":"regulation of T cell mediated immune response to tumour cell","type":"exact"},{"name":"regulation of T lymphocyte mediated immune response to tumor cell","type":"exact"},{"name":"regulation of T-cell mediated immune response to tumor cell","type":"exact"},{"name":"regulation of T-lymphocyte mediated immune response to tumor cell","type":"exact"}],"termid":"GO:0002840"}


id: GO:0004640
data:
  {"annotated_genes":["SJAG_01455"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70277],"is_not":false,"summary":null,"term":"GO:0004640"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-(5-phospho-beta-D-ribosyl)anthranilate = 1-(2-carboxyphenylamino)-1-deoxy-D-ribulose 5-phosphate.","definition_xrefs":["RHEA:21540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoribosylanthranilate isomerase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:5.3.1.24","KEGG_REACTION:R03509","MetaCyc:PRAISOM-RXN"],"synonyms":[{"name":"IGPS:PRAI (indole-3-glycerol-phosphate synthetase/N-5'-phosphoribosylanthranilate isomerase complex)","type":"related"},{"name":"N-(5'-phosphoribosyl)anthranilate isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate aldose-ketose-isomerase activity","type":"related"},{"name":"N-(5-phospho-beta-D-ribosyl)anthranilate ketol-isomerase activity","type":"related"},{"name":"PRA isomerase activity","type":"related"},{"name":"PRAI activity","type":"related"}],"termid":"GO:0004640","terms_by_termid":{"GO:0004640":null}}


id: GO:1903556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tumor necrosis factor superfamily cytokine production.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24187568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903555"},{"relation_name":"negatively_regulates","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tumor necrosis factor superfamily cytokine production","synonyms":[{"name":"down regulation of TNF superfamily production","type":"related"},{"name":"down regulation of TNFSF cytokine production","type":"exact"},{"name":"down regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"down-regulation of TNF superfamily production","type":"related"},{"name":"down-regulation of TNFSF cytokine production","type":"exact"},{"name":"down-regulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"downregulation of TNF superfamily production","type":"related"},{"name":"downregulation of TNFSF cytokine production","type":"exact"},{"name":"downregulation of tumor necrosis factor superfamily cytokine production","type":"exact"},{"name":"inhibition of TNF superfamily production","type":"related"},{"name":"inhibition of TNFSF cytokine production","type":"narrow"},{"name":"inhibition of tumor necrosis factor superfamily cytokine production","type":"narrow"},{"name":"negative regulation of TNF superfamily production","type":"related"},{"name":"negative regulation of TNFSF cytokine production","type":"exact"}],"termid":"GO:1903556"}


id: PBO:0041330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 88","termid":"PBO:0041330"}


id: PBO:0052505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 18","termid":"PBO:0052505"}


id: GO:0006541
data:
  {"annotated_genes":["SJAG_02276","SJAG_03266","SJAG_04054","SJAG_00392","SJAG_00359","SJAG_00964"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58100,73858,74306],"is_not":false,"summary":null,"term":"GO:0006541"},{"annotations":[119799,96280,74093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[73431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glutamine, 2-amino-4-carbamoylbutanoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00359":null,"SJAG_00392":null,"SJAG_00964":null,"SJAG_02276":null,"SJAG_03266":null,"SJAG_04054":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"glutamine metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutamine metabolism","type":"exact"}],"termid":"GO:0006541","terms_by_termid":{"GO:0006541":null,"GO:0006542":null,"GO:0019676":null}}


id: MONDO:0010693
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital nystagmus in which the cause of the disease is a mutation in the FRMD7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nystagmus","termid":"MONDO:0005712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"nystagmus 1, congenital, X-linked","secondary_identifiers":["UMLS:C1839580","MESH:C537853","MEDGEN:333352","DOID:0111790","OMIM:310700"],"synonyms":[{"name":"FRMD7 congenital nystagmus","type":"exact"},{"name":"NYS1","type":"related"},{"name":"NYSTAGMUS 1, congenital, X-linked","type":"related"},{"name":"Nystagmus 1, congenital, X- linked","type":"related"},{"name":"Nystagmus 1, infantile, X-linked","type":"related"},{"name":"Nystagmus, congenital motor, 1","type":"related"},{"name":"Nystagmus, infantile idiopathic","type":"related"},{"name":"Nystagmus, infantile idiopathic, formerly","type":"related"},{"name":"Nystagmus, infantile periodic alternating, X-linked","type":"related"},{"name":"Xlpan","type":"related"},{"name":"congenital nystagmus caused by mutation in FRMD7","type":"exact"},{"name":"nystagmus 1, congenital, X-linked","type":"exact"}],"termid":"MONDO:0010693","xrefs":{"Monarch":{"xref_id":"0010693"}}}


id: PBO:0004293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rad23 homolog Rhp23","termid":"PBO:0004293"}


id: FYPO:0005739
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation results in the division of chromosomes into two distinct unequal masses containing unseparated sister chromatids, located at or near the ends of an elongated mitotic spindle.","definition_xrefs":["PMID:11792803","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complete but unequal mitotic sister chromatid segregation","termid":"FYPO:0001270"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0000641"],"is_obsolete":false,"name":"complete but unequal mitotic sister chromatid segregation with unseparated chromosomes","termid":"FYPO:0005739"}


id: FYPO:0003748
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to nuclear bodies is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to nuclear body","synonyms":[{"name":"abnormal protein localisation to nuclear body","type":"exact"},{"name":"abnormal protein localization to nuclear body during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nuclear body during vegetative growth","type":"exact"}],"termid":"FYPO:0003748"}


id: PBO:0031785
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cytokinesis","termid":"PBO:0031785"}


id: MONDO:0007453
data:
  {"annotated_genes":["SJAG_04495","SJAG_04334"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87118,87119],"is_not":false,"summary":null,"term":"MONDO:0007453"}]},"cv_name":"mondo","definition":"Monogenic diabetes caused by inactivating mutation(s) in the GCK gene, encoding glucokinase. Heterozygous GCK mutations may manifest as mild hyperglycemia, which is not progressive, and usually requires no treatment. Homozygous GCK mutations result in permanent neonatal diabetes.","definition_xrefs":["NCIT:C129741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04334":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0005015"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792","MONDO:0005015","MONDO:0004335","MONDO:0019254"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2201070","OMIM:125851","MEDGEN:87434","SCTID:237604008","DOID:0111100","UMLS:C0342277","GARD:10657"],"synonyms":[{"name":"GCK maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"GCK-associated diabetes mellitus","type":"exact"},{"name":"MODY 2 monogenic diabetes type 2","type":"exact"},{"name":"MODY glucokinase-related","type":"exact"},{"name":"MODY type 2","type":"exact"},{"name":"MODY, glucokinase-related","type":"related"},{"name":"MODY, type 2","type":"related"},{"name":"MODY, type II","type":"exact"},{"name":"MODY2","type":"exact"},{"name":"diabetes mellitus MODY type 2","type":"related"},{"name":"glucokinase-associated diabetes mellitus","type":"exact"},{"name":"maturity onset diabetes of the Young, type 2","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in GCK","type":"exact"},{"name":"maturity-onset diabetes of the young, type 2","type":"related"},{"name":"type 2 maturity-onset diabetes of the young","type":"related"}],"termid":"MONDO:0007453","terms_by_termid":{"MONDO:0007453":null},"xrefs":{"Monarch":{"xref_id":"0007453"}}}


id: PBO:0042599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 15","termid":"PBO:0042599"}


id: PBO:0077703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"troponin C2, fast skeletal type","termid":"PBO:0077703"}


id: FYPO:0005879
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are curved to form a \\\"C\\\" shape, i.e. they follow a smooth bend rather than a straight line, with the curve centered at or near the midpoint of the microtubule, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curved interphase microtubules","termid":"FYPO:0003327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"C-shaped interphase microtubules","synonyms":[{"name":"C-shaped cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"C-shaped interphase cytoplasmic microtubules","type":"exact"},{"name":"C-shaped interphase microtubules during mitotic cell cycle","type":"related"},{"name":"C-shaped interphase microtubules during vegetative growth","type":"exact"},{"name":"curved C-shaped interphase microtubules","type":"exact"}],"termid":"FYPO:0005879"}


id: PBO:0075190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 2","termid":"PBO:0075190"}


id: MONDO:0020069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Chronic form of encephalitis.","definition_xrefs":["MONDO:patterns/chronic"],"gene_count":0,"genotype_count":0,"name":"obsolete chronic encephalitis (obsolete MONDO:0020069)","secondary_identifiers":["Orphanet:98255"],"synonyms":[{"name":"encephalitis, chronic","type":"exact"}],"termid":"MONDO:0020069","xrefs":{"Monarch":{"xref_id":"0020069"}}}


id: PBO:0090458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 small nuclear RNA auxiliary factor small subunit, U2AF-59","termid":"PBO:0090458"}


id: GO:0004888
data:
  {"annotated_genes":["SJAG_02258","SJAG_01978","SJAG_01345","SJAG_01699"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[77338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[90151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"},{"annotations":[110487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140897"}]},"cv_name":"molecular_function","definition":"Combining with an extracellular or intracellular signal and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity or state as part of signal transduction.","definition_xrefs":["Wikipedia:Transmembrane_receptor","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null,"SJAG_02258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"transmembrane signaling receptor activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-193672","GO:0099600","GO:0004926"],"synonyms":[{"name":"transmembrane receptor activity","type":"broad"},{"name":"transmembrane signalling receptor activity","type":"exact"}],"termid":"GO:0004888","terms_by_termid":{"GO:0004932":null,"GO:0036320":null,"GO:0140897":null,"GO:1990576":null}}


id: PBO:0001685
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains DRE element","termid":"PBO:0001685"}


id: MONDO:0017800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian benign neoplasm","termid":"MONDO:0000646"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudo-Meigs syndrome","secondary_identifiers":["UMLS:C5190824","GARD:21373","MEDGEN:1678402","Orphanet:314459"],"synonyms":[{"name":"pseudo-Demons-Meigs syndrome","type":"exact"}],"termid":"MONDO:0017800","xrefs":{"Monarch":{"xref_id":"0017800"}}}


id: PBO:0077995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha constant","termid":"PBO:0077995"}


id: PBO:0079218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 3","termid":"PBO:0079218"}


id: MONDO:0002843
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gastritis resulting from fungi.","definition_xrefs":["NCIT:C27342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"gastritis","termid":"MONDO:0004966"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"fungal gastritis","secondary_identifiers":["SCTID:723097009","UMLS:C0948638","DOID:4034","MEDGEN:181761"],"synonyms":[{"name":"Fungi caused gastritis (disease)","type":"exact"},{"name":"Fungi gastritis (disease)","type":"exact"},{"name":"fungal gastritis","type":"exact"}],"termid":"MONDO:0002843","xrefs":{"Monarch":{"xref_id":"0002843"}}}


id: GO:0046779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that discriminates against and subsequently inhibits host transcripts containing introns, thus allowing only intronless viral mRNA to be fully processed.","definition_xrefs":["PMID:11598019"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of expression of host genes with introns (obsolete GO:0046779)","synonyms":[{"name":"negative regulation by virus of expression of host genes with introns","type":"exact"},{"name":"viral inhibition of expression of host genes with introns","type":"exact"}],"termid":"GO:0046779"}


id: GO:0062201
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular anatomical entity that is part of the actin cytoskeleton and results in a wave-like propagation of actin networks. It consists of dynamic structures traveling on the ventral (substrate-attached) side of the cell during cell migration, cytokinesis, adhesion and neurogenesis.","definition_xrefs":["PMID:31230946","PMID:31390543","PMID:26190109","PMID:31774725","PMID:31678045"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actin wave","termid":"GO:0062201"}


id: PBO:0087342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Spermidine synthase; involved in biosynthesis of spermidine and also in biosynthesis of pantothenic acid; spermidine is required for growth of wild-type cells","termid":"PBO:0087342"}


id: MONDO:0003779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gliomatosis cerebri (obsolete MONDO:0003779)","termid":"MONDO:0003779","xrefs":{"Monarch":{"xref_id":"0003779"}}}


id: PBO:0003249
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.12","termid":"PBO:0003249"}


id: GO:0097137
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BAD-BCL-xl complex","termid":"GO:0097137"}


id: PBO:0035830
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_serine_phosphorylation_at_RxxS_site_during_vegetative_growth","termid":"PBO:0035830"}


id: GO:0052352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont resulting in the formation of substances. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete biosynthesis by host of substance in symbiont (obsolete GO:0052352)","termid":"GO:0052352"}


id: PATO:0002476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position quality inhering in a bearer by virtue of the bearer's forming the end of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal","termid":"PATO:0002476"}


id: PBO:0063792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 20 like 1","termid":"PBO:0063792"}


id: GO:0120160
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an intraciliary transport particle A (IFT A) complex.","definition_xrefs":["PMID:20889716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"intraciliary transport particle A binding","synonyms":[{"name":"IFT A complex binding","type":"related"},{"name":"intraciliary transport complex A binding","type":"exact"},{"name":"intraflagellar transport complex A binding","type":"exact"},{"name":"intraflagellar transport particle A binding","type":"exact"}],"termid":"GO:0120160"}


id: PBO:0087606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CoA-Synthesizing Protein Complex (CoA-SPC); subunits of this complex are: Cab2p, Cab3p, Cab4p, Cab5p, Sis2p and Vhs3p; probable dephospho-CoA kinase (DPCK) that catalyzes the last step in coenzyme A biosynthesis; involved in histone acylation; null mutant lethality is complemented by human homolog DCAKD and by E. coli coaE (encoding DPCK); detected in purified mitochondria in high-throughput studies; also localized to lipid droplets","termid":"PBO:0087606"}


id: MONDO:1012713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epilepsy that occurs in dogs due to a mutation in the LGI2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy, dog","termid":"MONDO:1010411"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign familial juvenile epilepsy, LGI2-related, dog","secondary_identifiers":["OMIA:001596-9615"],"synonyms":[{"name":"BFJE","type":"exact"},{"name":"epilepsy, benign familial juvenile, LGI2-related, dog","type":"exact"}],"termid":"MONDO:1012713","xrefs":{"Monarch":{"xref_id":"1012713"}}}


id: PATO:0000946
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a somewhat elongated form with approximately parallel sides.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D shape","termid":"PATO:0002006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblong","termid":"PATO:0000946"}


id: MONDO:0700182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Erythroleukemia that occurs in a cat.","definition_xrefs":["NCIT:C134770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline erythroleukemia","termid":"MONDO:0700182","xrefs":{"Monarch":{"xref_id":"0700182"}}}


id: PBO:0040279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATOX1 antisense RNA 1","termid":"PBO:0040279"}


id: GO:0009600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a nematode is received and converted into a molecular signal.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of other organism","termid":"GO:0098543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of nematode","synonyms":[{"name":"perception of nematode","type":"related"}],"termid":"GO:0009600"}


id: PBO:0085290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pex3p interacting protein, required for pexophagy; interacts with Atg8p and Atg11p; mRNA is weakly cell cycle regulated, peaking in G2 phase; YJL185C is a non-essential gene","termid":"PBO:0085290"}


id: MONDO:0100214
data:
  {"annotated_genes":["SJAG_02206","SJAG_03626"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100215"},{"annotations":[87839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100220"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02206":null,"SJAG_03626":null},"genotype_count":0,"is_obsolete":false,"name":"Rajab interstitial lung disease with brain calcifications","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:462260","OMIMPS:613658","UMLS:C3150910"],"termid":"MONDO:0100214","terms_by_termid":{"MONDO:0100215":null,"MONDO:0100220":null},"xrefs":{"Monarch":{"xref_id":"0100214"}}}


id: PBO:0089666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent chromatin remodeller/ubiquitin-protein ligase E3 Rad8","termid":"PBO:0089666"}


id: MONDO:0006390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuroendocrine carcinoma of the prostate gland with unfavorable prognosis, composed of small cells containing neurosecretory granules. Approximately half of the cases show a mixture of small cells and adenocarcinoma cells.","definition_xrefs":["NCIT:C6766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"prostate neuroendocrine neoplasm","termid":"MONDO:0002477"},{"relation_name":"is_a","term_name":"prostate carcinoma","termid":"MONDO:0005159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate small cell carcinoma","secondary_identifiers":["EFO:1000499","DOID:7141","ONCOTREE:PRSCC","MEDGEN:266251","SCTID:396198006","UMLS:C1300585"],"synonyms":[{"name":"Oat cell carcinoma of prostate","type":"exact"},{"name":"Oat cell carcinoma of the prostate","type":"exact"},{"name":"PRSCC","type":"related"},{"name":"prostate Oat cell carcinoma","type":"exact"},{"name":"prostate gland small cell carcinoma","type":"exact"},{"name":"prostate oat cell carcinoma","type":"exact"},{"name":"prostate small cell NEC","type":"exact"},{"name":"prostate small cell carcinoma","type":"exact"},{"name":"prostate small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of prostate","type":"exact"},{"name":"small cell carcinoma of prostate gland","type":"exact"},{"name":"small cell carcinoma of the prostate","type":"exact"}],"termid":"MONDO:0006390","xrefs":{"Monarch":{"xref_id":"0006390"}}}


id: GO:2000789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of venous endothelial cell fate commitment.","definition_xrefs":["PMID:11585794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"positive regulation of blood vessel endothelial cell differentiation","termid":"GO:0110058"},{"relation_name":"is_a","term_name":"regulation of venous endothelial cell fate commitment","termid":"GO:2000787"},{"relation_name":"positively_regulates","term_name":"venous endothelial cell fate commitment","termid":"GO:0060845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of venous endothelial cell fate commitment","termid":"GO:2000789"}


id: FYPO:0006754
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which promoter-enhancer looping occurs to a lower extent than normal when the cell is subject to glucose starvation. Promoter-enhancer looping is mediated by interactions between proteins bound to DNA at promoters and at enhancers, or by a single protein binding at both sites.","definition_xrefs":["PomBase:mah","PMID:28934464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromosome organization","termid":"FYPO:0000641"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"decreased promoter-enhancer looping during glucose starvation","synonyms":[{"name":"decreased promoter-enhancer looping during glucose depletion","type":"exact"},{"name":"decreased promoter-enhancer looping during glucose deprivation","type":"exact"}],"termid":"FYPO:0006754"}


id: GO:0047060
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-pantolactone + A = 2-dehydropantolactone + AH(2).","definition_xrefs":["EC:1.1.99.27","RHEA:21004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(R)-pantolactone dehydrogenase (flavin) activity","secondary_identifiers":["KEGG_REACTION:R03156","MetaCyc:1.1.99.27-RXN"],"synonyms":[{"name":"(R)-pantolactone:acceptor oxidoreductase (flavin-containing)","type":"related"},{"name":"(R)-pantoyllactone dehydrogenase (flavin) activity","type":"related"},{"name":"2-dehydropantolactone reductase (flavin) activity","type":"related"},{"name":"2-dehydropantoyl-lactone reductase (flavin) activity","type":"related"}],"termid":"GO:0047060"}


id: MONDO:0002078
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431","SJAG_03145","SJAG_02730"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87941,87942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013567"},{"annotations":[87316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013011"},{"annotations":[88642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"},{"annotations":[88641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013769"}]},"cv_name":"mondo","definition":"A congenital disorder characterized by the presence of an abnormal communication between the atria or the ventricles of the heart due to defects in the cardiac septum.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_02730":null,"SJAG_03145":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart septal defect","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6752","NCIT:C84482","ICD9:745.9","SCTID:253273004","UMLS:C0018816","ICD9:745.8","DOID:1681","MESH:D006343"],"synonyms":[{"name":"Cardiac septal defects","type":"exact"},{"name":"congenital septal defect","type":"exact"},{"name":"congenital septal defect of heart","type":"exact"},{"name":"holes in the heart","type":"exact"},{"name":"septal defect","type":"exact"}],"termid":"MONDO:0002078","terms_by_termid":{"MONDO:0013011":null,"MONDO:0013567":null,"MONDO:0013769":null,"MONDO:0013770":null},"xrefs":{"Monarch":{"xref_id":"0002078"}}}


id: GO:0099030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic specialization membrane (obsolete GO:0099030)","termid":"GO:0099030"}


id: MONDO:0957572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 9","secondary_identifiers":["MEDGEN:1844414","UMLS:C5882678","OMIM:620478"],"termid":"MONDO:0957572","xrefs":{"Monarch":{"xref_id":"0957572"}}}


id: FYPO:0002438
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form actin cables that are shorter than normal and abnormally oriented within the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"short actin cables","termid":"FYPO:0002434"},{"relation_name":"has_part","term_name":"misoriented actin cables","termid":"FYPO:0002436"},{"relation_name":"is_a","term_name":"short actin cables","termid":"FYPO:0002434"},{"relation_name":"is_a","term_name":"misoriented actin cables","termid":"FYPO:0002436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0004803","FYPO:0001985"],"is_obsolete":false,"name":"short, misoriented actin cables","synonyms":[{"name":"short, abnormally oriented actin cables","type":"exact"},{"name":"short, misoriented actin cables during mitotic cell cycle","type":"related"},{"name":"short, misoriented actin cables during vegetative growth","type":"exact"},{"name":"short, misoriented formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0002438"}


id: PBO:0049554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 16, pseudogene","termid":"PBO:0049554"}


id: GO:0010844
data:
  {"annotated_genes":["SJAG_00266","SJAG_02311"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[94769,110020],"is_not":false,"summary":null,"term":"GO:0010844"}]},"cv_name":"molecular_function","definition":"Binding to a genomic region which promotes recombination.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_02311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"recombination hotspot binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA binding, recombination hotspot","type":"exact"}],"termid":"GO:0010844","terms_by_termid":{"GO:0010844":null}}


id: GO:0030539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the male genitalia over time, from its formation to the mature structure.","definition_xrefs":["GOC:ems","ISBN:0140512888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia development","termid":"GO:0048806"},{"relation_name":"is_a","term_name":"reproductive system development","termid":"GO:0061458"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male genitalia development","synonyms":[{"name":"male genital development","type":"exact"}],"termid":"GO:0030539"}


id: GO:1901532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic progenitor cell differentiation.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"hematopoietic progenitor cell differentiation","termid":"GO:0002244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic progenitor cell differentiation","synonyms":[{"name":"regulation of haematopoietic progenitor cell differentiation","type":"exact"},{"name":"regulation of haemopoietic progenitor cell differentiation","type":"exact"},{"name":"regulation of hemopoietic progenitor cell differentiation","type":"exact"}],"termid":"GO:1901532"}


id: GO:0034096
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the extent to which the association between sister chromatids of a replicated chromosome is maintained during a meiotic cell cycle.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of maintenance of sister chromatid cohesion","termid":"GO:0034093"},{"relation_name":"is_a","term_name":"regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034094"},{"relation_name":"positively_regulates","term_name":"maintenance of meiotic sister chromatid cohesion","termid":"GO:0034090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of maintenance of meiotic sister chromatid cohesion","termid":"GO:0034096"}


id: PBO:0113104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase eta (pol eta); involved in translesion synthesis during post-replication repair; catalyzes synthesis of DNA opposite cyclobutane pyrimidine dimers and other lesions; involved in formation of post-replicative damage-induced genome-wide cohesion; may also have role in protection against mitochondrial mutagenesis; may possibly be involved in meiosis; mutations in human pol eta are responsible for XPV","termid":"PBO:0113104"}


id: PBO:0084342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kynurenine aminotransferase; catalyzes formation of kynurenic acid from kynurenine; potential Cdc28p substrate","termid":"PBO:0084342"}


id: MONDO:0009253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fryns syndrome (FS) is a multiple congenital anomaly syndrome characterized by dysmorphic facial features, congenital diaphragmatic hernia, pulmonary hypoplasia, and distal limb hypoplasia, in addition to variable expression of additional malformations.","definition_xrefs":["Orphanet:2059"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fryns syndrome","secondary_identifiers":["NCIT:C98932","icd11.foundation:1327847749","ICD9:759.89","GARD:3699","MEDGEN:65088","MESH:C538070","NORD:1167","OMIM:229850","SCTID:702432006","UMLS:C0220730"],"synonyms":[{"name":"FRNS","type":"related"},{"name":"Fryns syndrome","type":"exact"},{"name":"Moerman Van den Berghe Fryns syndrome","type":"related"},{"name":"diaphragmatic hernia, abnormal face, and distal limb anomalies","type":"related"},{"name":"diaphragmatic hernia-abnormal face-distal limb anomalies syndrome","type":"exact"}],"termid":"MONDO:0009253","xrefs":{"Monarch":{"xref_id":"0009253"}}}


id: PBO:0056579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple C2 and transmembrane domain containing 2","termid":"PBO:0056579"}


id: FYPO:0001553
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which RNA processing is abnormal. RNA processing is the conversion of one or more primary RNA transcripts into one or more mature RNA molecules.","definition_xrefs":["GO:0006396","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000294","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abnormal RNA processing","synonyms":[{"name":"abnormal RNA processing during mitotic cell cycle","type":"related"},{"name":"abnormal RNA processing during vegetative growth","type":"exact"}],"termid":"FYPO:0001553"}


id: GO:0046204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nor-spermidine, a compound related to spermidine, N-(3-aminopropyl)-1,4-diaminobutane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nor-spermidine metabolic process","synonyms":[{"name":"nor-spermidine metabolism","type":"exact"}],"termid":"GO:0046204"}


id: PBO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snu2 transcription termination requires hairpin structure cleaved by Pac1","termid":"PBO:0016901"}


id: GO:0106293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + O2 = NAD + hydrogen peroxide (H2O2).","definition_xrefs":["GOC:rynl"],"gene_count":0,"genotype_count":0,"name":"obsolete NADH oxidase H202-forming activity (obsolete GO:0106293)","termid":"GO:0106293"}


id: PBO:0000732
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.2.1.16","termid":"PBO:0000732"}


id: GO:0032286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure and material content of mature central nervous system myelin is kept in a functional state.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelin maintenance","termid":"GO:0043217"},{"relation_name":"part_of","term_name":"central nervous system myelination","termid":"GO:0022010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"central nervous system myelin maintenance","synonyms":[{"name":"central nervous system myelin sheath maintenance","type":"exact"},{"name":"myelin maintenance in central nervous system","type":"exact"}],"termid":"GO:0032286"}


id: PBO:0114524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex WD repeat subunit Hif2","termid":"PBO:0114524"}


id: GO:0047779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + citrate + CoA = (3S)-citryl-CoA + ADP + H+ + phosphate.","definition_xrefs":["EC:6.2.1.18","RHEA:21472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-thiol ligase activity","termid":"GO:0016878"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"citrate-CoA ligase activity","secondary_identifiers":["KEGG_REACTION:R01322","MetaCyc:CITRATE--COA-LIGASE-RXN"],"synonyms":[{"name":"citrate thiokinase activity","type":"related"},{"name":"citrate:CoA ligase (ADP-forming)","type":"related"},{"name":"citrate:CoA ligase activity","type":"related"},{"name":"citryl-CoA synthetase activity","type":"related"}],"termid":"GO:0047779"}


id: MONDO:0850082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic bicoronal and metopic craniosynostosis","secondary_identifiers":["Orphanet:620198","UMLS:C5680394","MEDGEN:1843005","GARD:22479"],"termid":"MONDO:0850082","xrefs":{"Monarch":{"xref_id":"0850082"}}}


id: MOD:00271
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, the C-3' of a tyrosine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:9095195","PubMed:8325841","RESID:AA0266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-tyrosine residue","termid":"MOD:02075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-tyrosine","synonyms":[{"name":"(10S,11S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-10-(2-hydroxy-5-[(S)-2-amino-2-carboxy]ethylphenyl)-3,8,13,17-tetramethyl-21H,23H-10,11-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-(tyros-3'-yl)-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-tyrosine","type":"exact"}],"termid":"MOD:00271"}


id: GO:0010329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, out of a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"auxin efflux transmembrane transporter activity","synonyms":[{"name":"auxin efflux carrier","type":"related"},{"name":"auxin efflux facilitator","type":"related"}],"termid":"GO:0010329"}


id: GO:2001014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"skeletal muscle cell differentiation","termid":"GO:0035914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"}


id: MONDO:0005963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from infection with the second stage larvae of the parasite Spirometra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cestode infectious disease","termid":"MONDO:0042488"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sparganosis","secondary_identifiers":["ICD9:123.5","MESH:D013031","NCIT:C35030","EFO:0007488","icd11.foundation:22873958","SCTID:31659000","UMLS:C0037753","ICD10CM:B70.1","MEDGEN:52426","DOID:10080"],"synonyms":[{"name":"Spirometra caused disease or disorder","type":"exact"},{"name":"Spirometra disease or disorder","type":"exact"},{"name":"Spirometra infectious disease","type":"exact"},{"name":"infection by sparganum","type":"exact"},{"name":"sparganosis [larval diphyllobothriasis]","type":"exact"}],"termid":"MONDO:0005963","xrefs":{"Monarch":{"xref_id":"0005963"}}}


id: GO:0097573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: protein-S-S-glutathione + glutathione-SH = protein-SH + glutathione-S-S-glutathione.","definition_xrefs":["PMID:18992757","GOC:jd"],"gene_count":0,"genotype_count":0,"name":"obsolete glutathione oxidoreductase activity (obsolete GO:0097573)","termid":"GO:0097573"}


id: PBO:0075366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX5 antisense RNA 1","termid":"PBO:0075366"}


id: GO:1990556
data:
  {"annotated_genes":["SJAG_00671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90422],"is_not":false,"summary":null,"term":"GO:1990556"}]},"cv_name":"biological_process","definition":"The process in which 2-isopropylmalate(2-) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-isopropylmalate(2-) transmembrane transport","termid":"GO:1902357"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"mitochondrial isopropylmalate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990556","terms_by_termid":{"GO:1990556":null}}


id: GO:0047312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyruvate + L-phenylalanine = phenylpyruvate + L-alanine.","definition_xrefs":["RHEA:13053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aromatic-amino-acid transaminase activity","termid":"GO:0008793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"L-phenylalanine-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.58-RXN","Reactome:R-HSA-893593","KEGG_REACTION:R00692"],"synonyms":[{"name":"L-histidine:pyruvate aminotransferase activity","type":"related"},{"name":"L-phenylalanine(L-histidine):pyruvate aminotransferase activity","type":"broad"},{"name":"L-phenylalanine:pyruvate aminotransferase activity","type":"exact"},{"name":"L-phenylalanine:pyruvate transaminase activity","type":"exact"},{"name":"histidine aminotransferase activity","type":"related"},{"name":"histidine:pyruvate aminotransferase activity","type":"related"},{"name":"phenylalanine (histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) aminotransferase activity","type":"broad"},{"name":"phenylalanine(histidine) transaminase activity","type":"broad"},{"name":"phenylalanine(histidine):pyruvate aminotransferase activity","type":"broad"}],"termid":"GO:0047312"}


id: GO:0102241
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-L-rhamnose + soyasaponin III = H+ + UDP + soyasaponin I.","definition_xrefs":["EC:2.4.1.273","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"soyasaponin III rhamnosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12320","RHEA:31491"],"termid":"GO:0102241"}


id: PBO:0088478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sister chromatid separation inhibitor, securin","termid":"PBO:0088478"}


id: MONDO:0017834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypereosinophilic syndrome","termid":"MONDO:0015691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"secondary hypereosinophilic syndrome","secondary_identifiers":["UMLS:C5679897","Orphanet:314962","GARD:21396","MEDGEN:1814441"],"synonyms":[{"name":"HES-R","type":"exact"},{"name":"reactive hypereosinophilic syndrome","type":"exact"},{"name":"secondary HES","type":"exact"}],"termid":"MONDO:0017834","xrefs":{"Monarch":{"xref_id":"0017834"}}}


id: GO:0072690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of population growth during which single celled organisms reproduce by budding, fission, or other asexual methods.","definition_xrefs":["GOC:mah","GOV:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological phase","termid":"GO:0044848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"single-celled organism vegetative growth phase","secondary_identifiers":["GO:0062178"],"synonyms":[{"name":"stationary phase","type":"narrow"},{"name":"vegetative growth of a single-celled organism","type":"exact"}],"termid":"GO:0072690"}


id: PBO:0067416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 530, pseudogene","termid":"PBO:0067416"}


id: MONDO:0012406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated hyperparathyroidism","termid":"MONDO:0015027"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"abnormal mineralization disorder","termid":"MONDO:0800096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparathyroidism 3","secondary_identifiers":["UMLS:C1864729","MEDGEN:355277","MESH:C566450","GARD:18255","OMIM:610071"],"synonyms":[{"name":"HRPT3","type":"exact"},{"name":"hyperparathyroidism 3","type":"exact"},{"name":"hyperparathyroidism, familial isolated","type":"related"}],"termid":"MONDO:0012406","xrefs":{"Monarch":{"xref_id":"0012406"}}}


id: MONDO:0005811
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A viral infectious disease that results in infection located in eyes or located in upper respiratory tract of domestic rabbits, has material basis in Myxoma virus, which is transmitted by mosquitos, transmitted by biting flies or transmitted by direct contact. The infection has symptom conjunctivitis with a milky discharge from the inflamed eye and has symptom breathing difficulties.","definition_xrefs":["EFO:0007327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious myxomatosis","secondary_identifiers":["MESH:D009234"],"termid":"MONDO:0005811","xrefs":{"Monarch":{"xref_id":"0005811"}}}


id: GO:1901649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of actomyosin contractile ring localization.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of actomyosin contractile ring localization (obsolete GO:1901649)","termid":"GO:1901649"}


id: PBO:0081848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 781","termid":"PBO:0081848"}


id: PBO:0052616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kringle containing transmembrane protein 1","termid":"PBO:0052616"}


id: FYPO:0000676
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which protein targeting to the vacuole is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vacuolar transport during vegetative growth","termid":"FYPO:0000597"},{"relation_name":"is_a","term_name":"abnormal protein targeting during vegetative growth","termid":"FYPO:0000675"},{"relation_name":"is_a","term_name":"abnormal protein localization to vacuole","termid":"FYPO:0005490"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein targeting to vacuole","synonyms":[{"name":"abnormal protein targeting to vacuole during mitotic cell cycle","type":"related"},{"name":"abnormal protein targeting to vacuole during vegetative growth","type":"exact"},{"name":"abnormal vacuolar protein sorting","type":"exact"}],"termid":"FYPO:0000676"}


id: GO:0140486
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95784,95785],"is_not":false,"summary":null,"term":"GO:0140486"}]},"cv_name":"molecular_function","definition":"Binding to a zinc ion to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:12050156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion sequestering activity","termid":"GO:0140487"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140313"}],"interesting_parent_ids":["GO:0003674","GO:0140313"],"is_obsolete":false,"name":"zinc ion sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140486","terms_by_termid":{"GO:0140486":null}}


id: FYPO:0004485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the deacetylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein deacetylation during vegetative growth","synonyms":[{"name":"abnormal protein deacetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004485"}


id: GO:0004023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: an alcohol + NAD+ = an aldehyde or ketone + NADH + H+; can proceed in the absence of a metal ion.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol dehydrogenase (NAD+) activity, metal ion-independent (obsolete GO:0004023)","synonyms":[{"name":"alcohol dehydrogenase activity, metal ion-independent","type":"broad"}],"termid":"GO:0004023"}


id: PBO:0048146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FXYD domain containing ion transport regulator 6 pseudogene 2","termid":"PBO:0048146"}


id: PBO:0048190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type B receptor subunit 2","termid":"PBO:0048190"}


id: MOD:00944
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["Unimod:477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-trimethylammoniumbutanoyl derivatized residue","termid":"MOD:00943"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"d9-4-trimethylammoniumbutanoyl derivatized residue","synonyms":[{"name":"TMAB:2H(9)","type":"related"},{"name":"d9-4-trimethyllammoniumbutyryl-","type":"related"}],"termid":"MOD:00944"}


id: PBO:0071929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 6","termid":"PBO:0071929"}


id: PBO:0000209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intergenic RNA (predicted), possible alternative UTR","termid":"PBO:0000209"}


id: PBO:0045106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diencephalon/mesencephalon homeobox 1","termid":"PBO:0045106"}


id: PBO:0065970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD51 paralog D","termid":"PBO:0065970"}


id: GO:0009862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by salicylic acid involved in systemic acquired resistance.","definition_xrefs":["GOC:jy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salicylic acid mediated signaling pathway","termid":"GO:0009863"},{"relation_name":"part_of","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"systemic acquired resistance, salicylic acid mediated signaling pathway","synonyms":[{"name":"salicylic acid mediated signaling pathway (systemic acquired resistance)","type":"exact"},{"name":"systemic acquired resistance, salicylic acid mediated signalling pathway","type":"exact"}],"termid":"GO:0009862"}


id: PBO:0063056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) specific ribonuclease subunit PAN3","termid":"PBO:0063056"}


id: PBO:0058223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4513","termid":"PBO:0058223"}


id: GO:0004114
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004115"},{"annotations":[80989],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047555"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a nucleoside 3',5'-cyclic phosphate + H2O = a nucleoside 5'-phosphate.","definition_xrefs":["PMID:35216259","RHEA:14653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclic-nucleotide phosphodiesterase activity","termid":"GO:0004112"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016788","GO:0003674"],"is_obsolete":false,"name":"3',5'-cyclic-nucleotide phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:3.1.4.17","MetaCyc:3.1.4.17-RXN","Reactome:R-HSA-162425"],"synonyms":[{"name":"3', 5'-cyclic nucleoside monophosphate phosphodiesterase activity","type":"related"},{"name":"3',5' cyclic-nucleotide phosphodiesterase activity","type":"exact"},{"name":"3',5'-cyclic-nucleotide 5'-nucleotidohydrolase activity","type":"related"},{"name":"3',5'-cyclonucleotide phosphodiesterase activity","type":"related"},{"name":"3',5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"3': 5'-monophosphate phosphodiesterase (cyclic CMP) activity","type":"related"},{"name":"3':5'-cyclic nucleotide 5'-nucleotidohydrolase activity","type":"related"},{"name":"PDE","type":"related"},{"name":"cyclic 3',5'-mononucleotide phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5'-phosphodiesterase activity","type":"related"},{"name":"cyclic 3',5-nucleotide monophosphate phosphodiesterase activity","type":"related"},{"name":"cyclic AMP phosphodiesterase activity","type":"narrow"},{"name":"cyclic nucleotide phosphodiesterase activity","type":"related"},{"name":"cytidine 3':5'-monophosphate phosphodiesterase (cyclic CMP) activity","type":"related"},{"name":"nucleoside 3',5'-cyclic phosphate diesterase activity","type":"related"},{"name":"nucleoside-3',5-monophosphate phosphodiesterase activity","type":"related"}],"termid":"GO:0004114","terms_by_termid":{"GO:0004115":null,"GO:0047555":null}}


id: GO:0160189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An organelle membrane contact site between peroxisomal membrane and mitochondrial outer membrane.","definition_xrefs":["PMID:29684109","PMID:38669296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"peroxisomal-mitochondrial contact site","synonyms":[{"name":"PerMit contact","type":"exact"},{"name":"PerMit contact site","type":"exact"}],"termid":"GO:0160189"}


id: MONDO:0005132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A herpesvirus infection caused by Cytomegalovirus. Healthy individuals generally do not produce symptoms. However, the infection may be life-threatening in affected immunocompromised patients. The virus may cause retinitis, esophagitis, gastritis, and colitis. Morphologically, it is characterized by the presence of intranuclear inclusion bodies.","definition_xrefs":["NCIT:C53649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytomegalovirus infection","secondary_identifiers":["MEDGEN:8239","UMLS:C0010823","SCTID:28944009","MESH:D003586","ICD9:078.5","EFO:0001062"],"synonyms":[{"name":"CMV infection","type":"exact"},{"name":"Cytomegaloviral infection","type":"exact"},{"name":"HCMV infection","type":"exact"}],"termid":"MONDO:0005132","xrefs":{"Monarch":{"xref_id":"0005132"}}}


id: GO:0018303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0285"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulfide (obsolete GO:0018303)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-N3'-histidino tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018303"}


id: PATO:0002196
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality which inheres in a molecular entity by virtue of the molecular entity possessing more electrons overall than protons, thus having an overall negative charge.","definition_xrefs":["PATOC:JH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"electric charge","termid":"PATO:0002193"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative charge","termid":"PATO:0002196"}


id: MONDO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A paralytic poliomyelitis in which the site of paralysis is the bulbospinal tract.","direct_ancestors":[{"relation_name":"is_a","term_name":"paralytic poliomyelitis","termid":"MONDO:0000341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"bulbospinal polio","secondary_identifiers":["DOID:0050514"],"termid":"MONDO:0000340","xrefs":{"Monarch":{"xref_id":"0000340"}}}


id: MONDO:0008064
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal bones, absence of","secondary_identifiers":["OMIM:161480","MEDGEN:90946","MESH:C562753","UMLS:C0339851"],"synonyms":[{"name":"nasal bones, absence of","type":"exact"}],"termid":"MONDO:0008064","xrefs":{"Monarch":{"xref_id":"0008064"}}}


id: PBO:0017016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster protein (predicted)","termid":"PBO:0017016"}


id: PBO:0112851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asynchronous replication autosomal RNA 15-1","termid":"PBO:0112851"}


id: GO:0031461
data:
  {"annotated_genes":["SJAG_03219","SJAG_01801","SJAG_04661","SJAG_01956","SJAG_02837","SJAG_00615","SJAG_02044","SJAG_03680","SJAG_00666","SJAG_00756","SJAG_01022","SJAG_00439","SJAG_00192","SJAG_04574","SJAG_04853","SJAG_02119","SJAG_01573","SJAG_03651","SJAG_04142","SJAG_00146","SJAG_03575","SJAG_00071","SJAG_02186","SJAG_03858","SJAG_03351","SJAG_03728","SJAG_01540","SJAG_04335","SJAG_02162","SJAG_04540","SJAG_02822","SJAG_02651","SJAG_00341","SJAG_05236","SJAG_05297","SJAG_05329","SJAG_03037","SJAG_03417","SJAG_03350","SJAG_04520","SJAG_04087","SJAG_03561","SJAG_03454","SJAG_03809","SJAG_01480","SJAG_04971","SJAG_03130","SJAG_02591"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91255],"is_not":false,"summary":null,"term":"GO:0031461"},{"annotations":[72814,97178,80932,78528,81067,75112,65765,74991,75926,81041,72583,81889,67735,58344,79767,82325,72037,80321],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005680"},{"annotations":[96352,98732,120890,112529,116038,119756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043494"},{"annotations":[76869],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031463"},{"annotations":[107366,92868,92915,98690,72802,78161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080008"},{"annotations":[71955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031464"},{"annotations":[81265,81453,77900,99501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035361"},{"annotations":[92608,96355,111117,112368,99782,106891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043224"},{"annotations":[61491,90571,76022,97553,104885,82287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019005"}]},"cv_name":"cellular_component","definition":"Any ubiquitin ligase complex in which the catalytic core consists of a member of the cullin family and a RING domain protein; the core is associated with one or more additional proteins that confer substrate specificity.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin ligase complex","termid":"GO:0000151"}],"gene_count":48,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00146":null,"SJAG_00192":null,"SJAG_00341":null,"SJAG_00439":null,"SJAG_00615":null,"SJAG_00666":null,"SJAG_00756":null,"SJAG_01022":null,"SJAG_01480":null,"SJAG_01540":null,"SJAG_01573":null,"SJAG_01801":null,"SJAG_01956":null,"SJAG_02044":null,"SJAG_02119":null,"SJAG_02162":null,"SJAG_02186":null,"SJAG_02591":null,"SJAG_02651":null,"SJAG_02822":null,"SJAG_02837":null,"SJAG_03037":null,"SJAG_03130":null,"SJAG_03219":null,"SJAG_03350":null,"SJAG_03351":null,"SJAG_03417":null,"SJAG_03454":null,"SJAG_03561":null,"SJAG_03575":null,"SJAG_03651":null,"SJAG_03680":null,"SJAG_03728":null,"SJAG_03809":null,"SJAG_03858":null,"SJAG_04087":null,"SJAG_04142":null,"SJAG_04335":null,"SJAG_04520":null,"SJAG_04540":null,"SJAG_04574":null,"SJAG_04661":null,"SJAG_04853":null,"SJAG_04971":null,"SJAG_05236":null,"SJAG_05297":null,"SJAG_05329":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cullin-RING ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"CRL complex","type":"exact"},{"name":"cullin complex","type":"exact"},{"name":"cullin-RING ligase","type":"related"}],"termid":"GO:0031461","terms_by_termid":{"GO:0005680":null,"GO:0019005":null,"GO:0031461":null,"GO:0031463":null,"GO:0031464":null,"GO:0035361":null,"GO:0043224":null,"GO:0043494":null,"GO:0080008":null}}


id: MONDO:0011814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Smith-McCort dysplasia in which the cause of the disease is a mutation in the DYM gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Smith-McCort dysplasia","termid":"MONDO:0015799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Smith-McCort dysplasia 1","secondary_identifiers":["MEDGEN:854757","DOID:0081270","GARD:15411","OMIM:607326","UMLS:C3888088"],"synonyms":[{"name":"DYM Smith-McCort dysplasia","type":"exact"},{"name":"SMC","type":"related"},{"name":"SMITH-McCort dysplasia 1","type":"related"},{"name":"Smc1","type":"related"},{"name":"Smith-McCort dysplasia","type":"broad"},{"name":"Smith-McCort dysplasia 1","type":"exact"},{"name":"Smith-McCort dysplasia caused by mutation in DYM","type":"exact"},{"name":"Smith-McCort dysplasia type 1","type":"exact"}],"termid":"MONDO:0011814","xrefs":{"Monarch":{"xref_id":"0011814"}}}


id: FYPO:0006218
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to potassium ion starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to potassium ion starvation","synonyms":[{"name":"decreased growth during cellular response to potassium ion starvation","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to potassium ion starvation","type":"exact"},{"name":"hypersensitive to potassium ion starvation","type":"exact"},{"name":"reduced growth in low potassium","type":"related"},{"name":"sensitive to potassium ion depletion","type":"exact"},{"name":"sensitive to potassium ion deprivation","type":"exact"},{"name":"sensitive to potassium ion starvation during mitotic cell cycle","type":"related"},{"name":"sensitive to potassium ion starvation during vegetative growth","type":"exact"},{"name":"sensitive to potassium starvation","type":"exact"}],"termid":"FYPO:0006218"}


id: PBO:0046718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 4","termid":"PBO:0046718"}


id: MONDO:0019623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary angioedema (HAE) is a genetic disease characterized by the occurrence of transitory and recurrent subcutaneous and/or submucosal edemas resulting in swelling and/or abdominal pain.","definition_xrefs":["Orphanet:91378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angioedema","termid":"MONDO:0010481"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hereditary angioedema","secondary_identifiers":["OMIMPS:106100","NCIT:C84758","MedDRA:10019860","NANDO:1200365","NANDO:2200795","GARD:5979","MEDGEN:9229","MESH:D054179","DOID:14735","UMLS:C0019243","icd11.foundation:795969334","SCTID:82966003"],"synonyms":[{"name":"HAE","type":"exact"},{"name":"HANE","type":"exact"},{"name":"angioedema, hereditary","type":"related"},{"name":"deficiency of C1 esterase inhibitor","type":"related"},{"name":"familial angioneurotic edema","type":"exact"},{"name":"familial angioneurotic oedema","type":"exact"},{"name":"hereditary angioedema","type":"exact"},{"name":"hereditary angioneurotic edema","type":"exact"},{"name":"hereditary angioneurotic oedema","type":"exact"},{"name":"hereditary bradykinine-induced angioedema","type":"exact"},{"name":"hereditary non histamine-induced angioedema","type":"exact"}],"termid":"MONDO:0019623","xrefs":{"Monarch":{"xref_id":"0019623"}}}


id: GO:0015984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of noncoupled solute translocation or facilitated diffusion.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete uniport (obsolete GO:0015984)","synonyms":[{"name":"uniport","type":"exact"}],"termid":"GO:0015984"}


id: PBO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced transmembrane protein 1","termid":"PBO:0050915"}


id: PBO:0089792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit 7a","termid":"PBO:0089792"}


id: PBO:0057994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3918","termid":"PBO:0057994"}


id: FYECO:0000254
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in medium containing glucose, salts, water and with ammonium as the nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose MM, ammonium nitrogen source","termid":"FYECO:0000254"}


id: PBO:0005798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-X (predicted)","termid":"PBO:0005798"}


id: GO:0099002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry of a symbiont's genome into the host cell through the host cell envelope via a short tail ejection system consisting a central tube, the connector which attaches the tail to the phage capsid and releases inner core proteins. Upon binding to the host cell surface, the phage displays a tube-like extension of its short tail that penetrates both host membranes. This tail extension comes from the release of viral core proteins with channel forming properties. Occurs in non-enveloped prokaryotic viruses.","definition_xrefs":["PMID:22297513","VZ:3954","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont genome ejection through host cell envelope","termid":"GO:0039678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont genome ejection through host cell envelope, short tail mechanism","synonyms":[{"name":"viral genome ejection through host cell envelope, short tail mechanism","type":"related"},{"name":"viral short tail ejection system","type":"exact"}],"termid":"GO:0099002"}


id: GO:0035441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the differentiation of an endothelial cell that will form de novo blood vessels and tubes.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"vasculogenesis","termid":"GO:0001570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in vasculogenesis","termid":"GO:0035441"}


id: FYPO:0008069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at the mating type locus is observed over an increased portion of the mating-type region.","definition_xrefs":["PMID:18030666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0005065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"increased spatial extent of histone H3-K9 methylation at mating type locus during vegetative growth","termid":"FYPO:0008069"}


id: GO:0070398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of wall teichoic acid, which is a major component of the cell wall of Gram-positive bacteria and typically consists of a polymer of glycerol-phosphate or ribitol-phosphate to which are attached glycosyl and D-alanyl ester residues and which is covalently linked to peptidoglycan.","definition_xrefs":["GOC:add","PMID:14665680","PMID:16020688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teichoic acid biosynthetic process","termid":"GO:0019350"},{"relation_name":"is_a","term_name":"wall teichoic acid metabolic process","termid":"GO:0070397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0071554","GO:0044281","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"wall teichoic acid biosynthetic process","synonyms":[{"name":"WTA biosynthetic process","type":"exact"},{"name":"wall teichoic acid anabolism","type":"exact"},{"name":"wall teichoic acid biosynthesis","type":"exact"},{"name":"wall teichoic acid formation","type":"exact"},{"name":"wall teichoic acid synthesis","type":"exact"}],"termid":"GO:0070398"}


id: MONDO:0004634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vein.","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vein disorder","secondary_identifiers":["DOID:866","ICD9:453","NCIT:C35279","MEDGEN:115992","UMLS:C0235522","SCTID:90507008"],"synonyms":[{"name":"disease of vein","type":"exact"},{"name":"disease or disorder of vein","type":"exact"},{"name":"disorder of vein","type":"exact"},{"name":"vein disease","type":"exact"},{"name":"vein disease or disorder","type":"exact"}],"termid":"MONDO:0004634","xrefs":{"Monarch":{"xref_id":"0004634"}}}


id: PBO:0066489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A like 1","termid":"PBO:0066489"}


id: PBO:0060423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAALADL2 antisense RNA 2","termid":"PBO:0060423"}


id: FYPO:0001416
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of sulfide:quinone oxidoreductase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased oxidoreductase activity","termid":"FYPO:0000690"},{"relation_name":"is_a","term_name":"abnormal sulfide:quinone oxidoreductase activity","termid":"FYPO:0001415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"decreased sulfide:quinone oxidoreductase activity","synonyms":[{"name":"decreased sulfide-quinone reductase activity","type":"exact"},{"name":"decreased sulfide:quinone reductase activity","type":"exact"},{"name":"decreased sulphide:quinone oxidoreductase activity","type":"exact"},{"name":"reduced sulfide:quinone oxidoreductase activity","type":"exact"}],"termid":"FYPO:0001416"}


id: MONDO:0007753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autonomic disorder characterized by excessive sweating of the forehead, upper lip, perioral region, or sternum subsequent to gustatory stimuli. The auriculotemporal syndrome features facial flushing or sweating limited to the distribution of the auriculotemporal nerve and may develop after trauma to the parotid gland, in association with parotid neoplasms, or following their surgical removal. (From Ann Neurol 1997 Dec;42(6):973-5)","definition_xrefs":["MESH:D013547"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Frey syndrome","secondary_identifiers":["MEDGEN:21041","Orphanet:662240","UMLS:C0038994","OMIM:144100","DOID:11599","EFO:1000940","SCTID:238758008"],"synonyms":[{"name":"Baillarger syndrome","type":"exact"},{"name":"Frey syndrome","type":"exact"},{"name":"Frey's syndrome","type":"related"},{"name":"HYPRG","type":"related"},{"name":"auriculotemporal nerve syndrome","type":"related"},{"name":"gustatory hyperhidrosis","type":"exact"},{"name":"gustatory sweating","type":"exact"},{"name":"hyperhidrosis gustatory","type":"related"},{"name":"hyperhidrosis, gustatory","type":"related"}],"termid":"MONDO:0007753","xrefs":{"Monarch":{"xref_id":"0007753"}}}


id: MONDO:1012801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mitochondrial disease characterized by central nervous system development delay that occurs in pigs due to a mutation in the SURF1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:29601977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"mitochondrial disease, non-human animal","termid":"MONDO:1011332"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leigh syndrome, SURF1-related, pig","secondary_identifiers":["OMIA:002147-9823"],"termid":"MONDO:1012801","xrefs":{"Monarch":{"xref_id":"1012801"}}}


id: PBO:0029331
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H2A_phosphorylation","termid":"PBO:0029331"}


id: GO:0014810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of skeletal muscle contraction via the regulation of the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol. The sarcoplasmic reticulum is the endoplasmic reticulum of striated muscle, specialised for the sequestration of calcium ions that are released upon receipt of a signal relayed by the T tubules from the neuromuscular junction.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014809"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of skeletal muscle contraction by regulation of release of sequestered calcium ion","termid":"GO:0014810"}


id: GO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Blocks the binding of interleukin-1 to the interleukin-1 receptor complex.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"interleukin-1 binding","termid":"GO:0019966"},{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0098772","GO:0140678"],"is_obsolete":false,"name":"interleukin-1 receptor antagonist activity","synonyms":[{"name":"IL-1ra","type":"exact"}],"termid":"GO:0005152"}


id: FYPO:0004587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing urea as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0001985","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"abolished cell population growth on urea nitrogen source","synonyms":[{"name":"abolished urea utilization","type":"related"},{"name":"abolished vegetative cell population growth on urea nitrogen source","type":"exact"},{"name":"cell population growth on urea nitrogen source abolished","type":"exact"}],"termid":"FYPO:0004587"}


id: PBO:0075211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntrophin beta 1","termid":"PBO:0075211"}


id: PBO:0047610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin homology 2 domain containing 1","termid":"PBO:0047610"}


id: PBO:0061195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide nucleotide transhydrogenase","termid":"PBO:0061195"}


id: PBO:0005866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell surface glycoprotein (predicted), DUF1773 family protein 5","termid":"PBO:0005866"}


id: PBO:0076227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT16 homolog, facilitates chromatin remodeling subunit","termid":"PBO:0076227"}


id: GO:0140469
data:
  {"annotated_genes":["SJAG_02072","SJAG_05000","SJAG_04873","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71925,82292,101450,111714],"is_not":false,"summary":null,"term":"GO:0140469"}]},"cv_name":"biological_process","definition":"A series of reactions in which a signal is passed on to downstream proteins within the cell via GCN2 (also known as EIF2AK4), an intracellular protein kinase that is activated by stress signals, such as amino acid starvation.","definition_xrefs":["PMID:27629041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrated stress response signaling","termid":"GO:0140467"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_02072":null,"SJAG_04873":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"GCN2-mediated signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0060733"],"synonyms":[{"name":"EIF2AK4-mediated signaling","type":"exact"},{"name":"regulation of eIF2 alpha phosphorylation by amino acid starvation","type":"narrow"}],"termid":"GO:0140469","terms_by_termid":{"GO:0140469":null}}


id: MONDO:0008296
data:
  {"annotated_genes":["SJAG_04109"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87694],"is_not":false,"summary":null,"term":"MONDO:0008296"}]},"cv_name":"mondo","definition":"An instance of porphyria cutanea tarda that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyria cutanea tarda","termid":"MONDO:0015104"},{"relation_name":"is_a","term_name":"UROD-related inherited porphyria","termid":"MONDO:0100498"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019142"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005093","MONDO:0019142","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"familial porphyria cutanea tarda","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:75669","SCTID:59229005","OMIM:176100","EFO:0009043","GARD:17750","Orphanet:443062","UMLS:C0268323","icd11.foundation:1318287619"],"synonyms":[{"name":"PCT","type":"related"},{"name":"PCT, 'familial' type","type":"related"},{"name":"PCT, type 2","type":"related"},{"name":"Urod deficiency","type":"related"},{"name":"hereditary porphyria cutanea tarda","type":"exact"},{"name":"porphyria cutanea tarda","type":"related"},{"name":"porphyria cutanea tarda type II","type":"exact"},{"name":"porphyria cutanea tarda, susceptibility to","type":"exact"},{"name":"porphyria cutanea tarda, type 2","type":"related"},{"name":"porphyria, Hepatocutaneous type","type":"related"},{"name":"porphyria, hepatoerythropoietic","type":"related"},{"name":"uroporphyrinogen decarboxylase deficiency","type":"related"}],"termid":"MONDO:0008296","terms_by_termid":{"MONDO:0008296":null},"xrefs":{"Monarch":{"xref_id":"0008296"}}}


id: GO:0099046
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A defense process that protects an organism from DNA or RNA from an invading organism.","definition_xrefs":["GO:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"clearance of foreign intracellular nucleic acids","termid":"GO:0099046"}


id: PBO:0086215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that binds to Fpr1p; confers rapamycin resistance by competing with rapamycin for Fpr1p binding; accumulates in the nucleus upon treatment of cells with rapamycin; has similarity to D. melanogaster shuttle craft and human NFX1","termid":"PBO:0086215"}


id: PBO:0085663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in N-glycosylation; deletion mutation confers sensitivity to exidative stress and shows synthetic lethality with mutations in the spindle checkpoint genes BUB3 and MAD1; YNL080C is not an essential gene","termid":"PBO:0085663"}


id: GO:0033569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of lactoferrin from one side of a membrane to the other.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transmembrane transporter activity","termid":"GO:0008320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140318","GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"lactoferrin transmembrane transporter activity","termid":"GO:0033569"}


id: MONDO:0001246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of infectious diseases that include epidemic typhus, scrub typhus and murine typhus.","definition_xrefs":["Wikipedia:Typhus"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Rickettsiaceae infectious disease","termid":"MONDO:0006927"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"typhus","secondary_identifiers":["ICD10CM:A75","icd11.foundation:292650041","DOID:11256","EFO:0009117","Orphanet:102023","UMLS:C0041471","MEDGEN:11976","ICD9:081.0","ICD9:080","SCTID:240613006","ICD9:081.9","GARD:19829"],"synonyms":[{"name":"European typhus","type":"related"},{"name":"Mexican typhus","type":"related"},{"name":"Moscow typhus","type":"related"},{"name":"Urban typhus","type":"related"},{"name":"classical typhus","type":"related"},{"name":"classical typhus (fever)","type":"related"},{"name":"endemic flea-borne typhus","type":"narrow"},{"name":"endemic typhus fever","type":"narrow"},{"name":"epidemic (louse-borne) typhus","type":"related"},{"name":"epidemic louse-borne typhus","type":"narrow"},{"name":"epidemic louse-borne typhus fever due to Rickettsia prowazekii","type":"related"},{"name":"exanthematic typhus fever","type":"narrow"},{"name":"exanthematous typhus","type":"related"},{"name":"famine fever","type":"related"},{"name":"flea typhus","type":"narrow"},{"name":"flea-borne rickettsiosis","type":"related"},{"name":"flea-borne typhus","type":"related"},{"name":"gaol fever","type":"related"},{"name":"hospital fever","type":"related"},{"name":"jail fever","type":"related"},{"name":"louse-borne [epidemic] typhus","type":"narrow"},{"name":"louse-borne rickettsiosis","type":"related"},{"name":"louse-borne typhus","type":"related"},{"name":"murine [endemic] typhus","type":"narrow"},{"name":"murine typhus","type":"related"},{"name":"petechial fever","type":"related"},{"name":"prison fever","type":"related"},{"name":"rat flea typhus","type":"related"},{"name":"ship fever","type":"related"},{"name":"shop typhus","type":"related"},{"name":"typhus exanthematique","type":"related"},{"name":"typhus fever","type":"exact"},{"name":"typhus-group rickettsiae disease","type":"exact"},{"name":"typhus-group rickettsiosis","type":"exact"}],"termid":"MONDO:0001246","xrefs":{"Monarch":{"xref_id":"0001246"}}}


id: MONDO:1010548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diprosopus that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diprosopus, non-human animal","termid":"MONDO:1010045"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diprosopus, cattle","secondary_identifiers":["OMIA:000290-9913"],"termid":"MONDO:1010548","xrefs":{"Monarch":{"xref_id":"1010548"}}}


id: GO:0043981
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the addition of an acetyl group to a lysine residue at position 5 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K5 acetylation (obsolete GO:0043981)","synonyms":[{"name":"histone H4 acetylation at K5","type":"exact"}],"termid":"GO:0043981"}


id: GO:0016099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monoterpenoid compounds, terpenoids having a C10 skeleton.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoterpenoid metabolic process","termid":"GO:0016098"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"monoterpenoid biosynthetic process","secondary_identifiers":["MetaCyc:PWY-3041"],"synonyms":[{"name":"monoterpenoid anabolism","type":"exact"},{"name":"monoterpenoid biosynthesis","type":"exact"},{"name":"monoterpenoid formation","type":"exact"},{"name":"monoterpenoid synthesis","type":"exact"}],"termid":"GO:0016099"}


id: FYPO:0003155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cells grow from one end, and do not grow continuously, but instead oscillate between periods of growth and pauses during which no growth occurs.","definition_xrefs":["PomBase:mah","PMID:24146635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell growth","termid":"FYPO:0003154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"intermittent monopolar cell growth","synonyms":[{"name":"intermittent monopolar vegetative cell growth","type":"exact"}],"termid":"FYPO:0003155"}


id: MONDO:0022109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete catatrichy (obsolete MONDO:0022109)","secondary_identifiers":["MESH:C535346","OMIM:116850"],"synonyms":[{"name":"forelock","type":"related"}],"termid":"MONDO:0022109","xrefs":{"Monarch":{"xref_id":"0022109"}}}


id: PBO:0003601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type I ribosomal protein arginine N-methyltransferase Rmt3","termid":"PBO:0003601"}


id: PBO:0113145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding protein of the rho subfamily of Ras-like small GTPases; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p); positive regulatory subunit of the 1,3-beta-D-glucan synthase complex, activating 1,3-beta-glucan synthase (Fks1p and Gsc2p), an enzyme involved in cell wall biosynthesis","termid":"PBO:0113145"}


id: MONDO:0005532
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Crohn's disease affecting the colon.","definition_xrefs":["NCIT:C35211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Crohn disease","termid":"MONDO:0005011"},{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"Crohn's colitis","secondary_identifiers":["DOID:0060192","NANDO:1200446","EFO:0005622","ICD9:555.1","MEDGEN:57618","UMLS:C0156147"],"synonyms":[{"name":"Crohn colitis","type":"exact"}],"termid":"MONDO:0005532","xrefs":{"Monarch":{"xref_id":"0005532"}}}


id: PBO:0084422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Major isomaltase (alpha-1,6-glucosidase/alpha-methylglucosidase); required for isomaltose utilization; preferred specificity for isomaltose, alpha-methylglucoside, and palatinose, but also exhibits alpha-1,2 glucosidase activity on sucrose and kojibiose, and can cleave the 1,3-alpha linkage of nigerose and turanose and the alpha-1,5 linkage of leucrose in vitro; member of the IMA isomaltase family","termid":"PBO:0084422"}


id: PATO:0001824
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A wetness quality inhering in a bearer by virtue of the bearer's not being covered by a liquid.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"wetness","termid":"PATO:0001822"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dry","termid":"PATO:0001824"}


id: PBO:0064457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POGLUT2 pseudogene 1","termid":"PBO:0064457"}


id: MONDO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ariboflavinosis","termid":"MONDO:0004573"},{"relation_name":"is_a","term_name":"disorder of metabolite absorption and transport","termid":"MONDO:0017757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"maternal riboflavin deficiency","secondary_identifiers":["MEDGEN:1657395","UMLS:C4750953","GARD:17686","Orphanet:411712"],"synonyms":[{"name":"RBFVD","type":"broad"},{"name":"maternal riboflavin deficiency","type":"exact"},{"name":"riboflavin deficiency","type":"broad"}],"termid":"MONDO:0014013","xrefs":{"Monarch":{"xref_id":"0014013"}}}


id: GO:1905014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of 'de novo' NAD biosynthetic process from L-tryptophan.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:bf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of L-tryptophan metabolic process","termid":"GO:0090358"},{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide biosynthetic process","termid":"GO:1900373"},{"relation_name":"is_a","term_name":"positive regulation of NAD metabolic process","termid":"GO:1902690"},{"relation_name":"is_a","term_name":"regulation of 'de novo' NAD biosynthetic process from L-tryptophan","termid":"GO:1905012"},{"relation_name":"positively_regulates","term_name":"'de novo' NAD+ biosynthetic process from L-tryptophan","termid":"GO:0034354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"positive regulation of 'de novo' NAD biosynthetic process from L-tryptophan","synonyms":[{"name":"activation of 'de novo' NAD biosynthetic process from tryptophan","type":"narrow"},{"name":"activation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"positive regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"broad"},{"name":"positive regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"up-regulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"up-regulation of de novo NAD biosynthetic process from tryptophan","type":"related"},{"name":"upregulation of 'de novo' NAD biosynthetic process from tryptophan","type":"exact"},{"name":"upregulation of de novo NAD biosynthetic process from tryptophan","type":"related"}],"termid":"GO:1905014"}


id: FYPO:0004950
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell is elongated, and the nucleus is longer than normal and undergoes oscillatory movement.","definition_xrefs":["PomBase:mah","PMID:16611238","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"elongated nucleus during vegetative growth","termid":"FYPO:0000832"},{"relation_name":"is_a","term_name":"elongated vegetative cell with oscillating nucleus","termid":"FYPO:0005002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002403","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"elongated vegetative cell with elongated oscillating nucleus","synonyms":[{"name":"elongated cell with elongated oscillating nucleus during vegetative growth","type":"exact"},{"name":"elongated vegetative cell with elongated oscillating nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004950"}


id: GO:0033273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nutrient","termid":"GO:0007584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin","termid":"GO:0033273"}


id: PBO:0061636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUDT16 divergent transcript","termid":"PBO:0061636"}


id: GO:0046436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-alanine, the D-enantiomer of the amino acid alanine, i.e. (2R)-2-aminopropanoic acid.","definition_xrefs":["GOC:ai","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine metabolic process","termid":"GO:0006522"},{"relation_name":"is_a","term_name":"D-amino acid metabolic process","termid":"GO:0046416"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-alanine metabolic process","synonyms":[{"name":"D-alanine metabolism","type":"exact"}],"termid":"GO:0046436"}


id: PBO:0085781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the mitochondrial outer surface; links the Arp2/3 complex with the mitochondria during anterograde mitochondrial movement; also binds to and promotes degradation of mRNAs for select nuclear-encoded mitochondrial proteins; translationally represses oxidative stress-linked genes; regulates CoQ biosynthesis","termid":"PBO:0085781"}


id: GO:0004941
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with epinephrine or norepinephrine to initiate a change in cell activity via activation of a G protein, with pharmacological characteristics of beta2-adrenergic receptors.","definition_xrefs":["GOC:mah","IUPHAR_GPCR:1274"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-adrenergic receptor activity","termid":"GO:0004939"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"beta2-adrenergic receptor activity","synonyms":[{"name":"beta2 adrenoceptor","type":"exact"}],"termid":"GO:0004941"}


id: GO:1902366
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Notch signaling pathway involved in somitogenesis.","definition_xrefs":["PMID:21795391","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Notch signaling pathway","termid":"GO:0008593"},{"relation_name":"regulates","term_name":"Notch signaling pathway involved in somitogenesis","termid":"GO:1902359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of Notch signaling pathway involved in somitogenesis","synonyms":[{"name":"regulation of N signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of N signaling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of N signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of N signalling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch receptor signalling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch signalling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch-receptor signaling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch-receptor signaling pathway involved in somitogenesis","type":"exact"},{"name":"regulation of Notch-receptor signalling pathway involved in formation of mesodermal clusters","type":"exact"},{"name":"regulation of Notch-receptor signalling pathway involved in somitogenesis","type":"exact"}],"termid":"GO:1902366"}


