# terms

id: MONDO:0005081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Preeclampsia is a hypertensive disorder of pregnancy that is characterized by new-onset hypertension with proteinuria presenting after 20 weeks of gestation, and depending on mild or severe forms may initially present with severe headache, visual disturbances, and hyperreflexia.","definition_xrefs":["Orphanet:275555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"toxemia of pregnancy","termid":"MONDO:0045048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preeclampsia","secondary_identifiers":["GARD:12924","NCIT:C85021","ICD9:642.42","ICD9:642.41","MEDGEN:18608","OMIMPS:189800","UMLS:C0032914","DOID:10591","EFO:0000668","ICD9:642.44","MedDRA:10036485","ICD9:642.43","SCTID:398254007","ICD10CM:O14","ICD9:642.40","MESH:D011225"],"synonyms":[{"name":"gestational hypertension","type":"exact"},{"name":"hypertension induced by pregnancy","type":"exact"},{"name":"pre-eclampsia","type":"exact"},{"name":"pre-eclamptic toxaemia","type":"exact"},{"name":"pre-eclamptic toxemia","type":"exact"},{"name":"preeclampsia","type":"exact"},{"name":"preeclampsia/eclampsia","type":"exact"},{"name":"pregnancy associated hypertension","type":"exact"},{"name":"pregnancy toxaemia","type":"exact"},{"name":"pregnancy toxemia","type":"exact"},{"name":"proteinuric hypertension of pregnancy","type":"exact"},{"name":"toxaemia of pregnancy","type":"related"},{"name":"toxemia of pregnancy","type":"related"}],"termid":"MONDO:0005081","xrefs":{"Monarch":{"xref_id":"0005081"}}}


id: PBO:0120071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-fucosyltransferase 3","termid":"PBO:0120071"}


id: PBO:0000372
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constitutive","termid":"PBO:0000372"}


id: GO:1902608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of large conductance calcium-activated potassium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:23407708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of large conductance calcium-activated potassium channel activity","synonyms":[{"name":"activation of BK KCa channels","type":"narrow"},{"name":"activation of BK calcium-activated potassium channel activity","type":"narrow"},{"name":"activation of BK channel activity","type":"related"},{"name":"activation of large conductance KCa channels","type":"narrow"},{"name":"activation of large conductance calcium-activated potassium channel activity","type":"narrow"},{"name":"positive regulation of BK KCa channels","type":"exact"},{"name":"positive regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"positive regulation of BK channel activity","type":"related"},{"name":"positive regulation of large conductance KCa channels","type":"exact"},{"name":"up regulation of BK KCa channels","type":"exact"},{"name":"up regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"up regulation of BK channel activity","type":"related"},{"name":"up regulation of large conductance KCa channels","type":"exact"},{"name":"up regulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"up-regulation of BK KCa channels","type":"exact"},{"name":"up-regulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"up-regulation of BK channel activity","type":"related"},{"name":"up-regulation of large conductance KCa channels","type":"exact"},{"name":"up-regulation of large conductance calcium-activated potassium channel activity","type":"exact"},{"name":"upregulation of BK KCa channels","type":"exact"},{"name":"upregulation of BK calcium-activated potassium channel activity","type":"exact"},{"name":"upregulation of BK channel activity","type":"related"},{"name":"upregulation of large conductance KCa channels","type":"exact"},{"name":"upregulation of large conductance calcium-activated potassium channel activity","type":"exact"}],"termid":"GO:1902608"}


id: MONDO:0041879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An pneumonia caused by infection with Staphylococcus aureus.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"staphylococcus aureus infection","termid":"MONDO:0005545"},{"relation_name":"is_a","term_name":"staphylococcal pneumonia","termid":"MONDO:0005970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"staphylococcus aureus pneumonia","secondary_identifiers":["SCTID:441658007","MEDGEN:167803","UMLS:C0857862","ICD10CM:J15.21"],"synonyms":[{"name":"Staphylococcus aureus caused pneumonia","type":"exact"},{"name":"Staphylococcus aureus pneumonia","type":"exact"},{"name":"pneumonia caused by staphylococcus aureus","type":"related"},{"name":"pneumonia due to staphylococcus aureus","type":"exact"},{"name":"staphylococcus aureus pneumonia","type":"exact"}],"termid":"MONDO:0041879","xrefs":{"Monarch":{"xref_id":"0041879"}}}


id: PBO:0074644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 36A","termid":"PBO:0074644"}


id: MONDO:0014419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ataxia-intellectual disability-oculomotor apraxia-cerebellar cysts syndrome is a rare neuro-ophthalmological disease characterized by nonprogressive cerebellar ataxia, delayed motor and language development, and intellectual disability in addition to ophthalmological abnormalities (e.g. oculomotor apraxia, strabismus, amblyopia, retinal dystrophy, and myopia). Cerebellar cysts, cerebellar dysplasia and cerebellar vermis hypoplasia, seen on magnetic resonance imaging, are also characteristic of the disease.","definition_xrefs":["Orphanet:370022"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"ataxia - intellectual disability - oculomotor apraxia - cerebellar cysts syndrome","secondary_identifiers":["OMIM:615960","UMLS:C4014821","GARD:17597","MEDGEN:863258"],"synonyms":[{"name":"PORETTI-Boltshauser syndrome","type":"related"},{"name":"PTBHS","type":"related"},{"name":"Poretti-Boltshauser syndrome","type":"exact"},{"name":"ataxia - intellectual disability - oculomotor apraxia - cerebellar cysts syndrome","type":"exact"}],"termid":"MONDO:0014419","xrefs":{"Monarch":{"xref_id":"0014419"}}}


id: MONDO:0011304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial cerebral cavernous malformation in which the cause of the disease is a mutation in the CCM2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"famililal cerebral cavernous malformations","termid":"MONDO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cerebral cavernous malformation 2","secondary_identifiers":["GARD:18313","MEDGEN:400438","OMIM:603284","MESH:C566394","UMLS:C1864041","DOID:0060670"],"synonyms":[{"name":"CCM2","type":"exact"},{"name":"CCM2 familial cerebral cavernous malformation","type":"exact"},{"name":"cerebral cavernous malformation 2","type":"exact"},{"name":"cerebral cavernous malformation type 2","type":"exact"},{"name":"cerebral cavernous malformations 2","type":"related"},{"name":"cerebral cavernous malformations type 2","type":"exact"},{"name":"cerebral cavernous malformations-2","type":"exact"},{"name":"familial cerebral cavernous malformation caused by mutation in CCM2","type":"exact"}],"termid":"MONDO:0011304","xrefs":{"Monarch":{"xref_id":"0011304"}}}


id: MOD:01965
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 2xC(13),3x(2)H labeled N6-acetyl-L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acetyl-L-lysine","termid":"MOD:00064"},{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(2)H deuterium tagged reagent","termid":"MOD:01431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"},{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875","MOD:00408"],"is_obsolete":false,"name":"2xC(13),3x(2)H labeled N6-acetyl-L-lysine","synonyms":[{"name":"Acetate labeling reagent (K) (heavy form, +5amu)","type":"exact"},{"name":"COFRADIC heavy acetyl 13C2 2H3","type":"exact"}],"termid":"MOD:01965"}


id: MONDO:0023557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious process affecting the vagina. Symptoms include pain and purulent discharge.","definition_xrefs":["NCIT:C84353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginitis","termid":"MONDO:0002234"},{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infective vaginitis","secondary_identifiers":["UMLS:C0404521","MEDGEN:140795","icd11.foundation:1436361154","SCTID:237091009"],"synonyms":[{"name":"Infective vaginitis","type":"related"},{"name":"PV - Vaginal infection","type":"related"},{"name":"Vaginal Infection","type":"related"},{"name":"Vaginal infection","type":"related"},{"name":"vaginal infection","type":"exact"}],"termid":"MONDO:0023557","xrefs":{"Monarch":{"xref_id":"0023557"}}}


id: GO:0047161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: hydroxymalonate + sinapoyl-CoA = CoA + sinapoyltartronate.","definition_xrefs":["RHEA:10952","EC:2.3.1.106"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tartronate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.106-RXN","KEGG_REACTION:R03965"],"synonyms":[{"name":"hydroxycinnamoyl-coenzyme-A:tartronate hydroxycinnamoyltransferase activity","type":"related"},{"name":"sinapoyl-CoA:2-hydroxymalonate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"tartronate sinapoyltransferase activity","type":"related"}],"termid":"GO:0047161"}


id: MONDO:0009350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by Potter sequence, heart defect, cleft palate, polydactyly, and skeletal defects.","definition_xrefs":["PMID:3232694","DOID:0060566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holzgreve-Wagner-Rehder syndrome","secondary_identifiers":["GARD:2728","MESH:C535327","MEDGEN:344650","OMIM:236110","Orphanet:2167","UMLS:C1856095"],"synonyms":[{"name":"Complex congenital heart defect, renal agenesis and cleft lip and palate","type":"related"},{"name":"Holzgreve Wagner Rehder syndrome","type":"exact"},{"name":"Holzgreve syndrome","type":"exact"},{"name":"cleft palate-Potter sequence-congenital heart anomalies-mesoaxial polydactyly-multiple malformations syndrome","type":"exact"}],"termid":"MONDO:0009350","xrefs":{"Monarch":{"xref_id":"0009350"}}}


id: PBO:0042617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corneodesmosin","termid":"PBO:0042617"}


id: PBO:0062044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 29","termid":"PBO:0062044"}


id: GO:0099045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a filamentous phage particle is released from a bacterial host cell via a concerted mechanism of assembly and secretion. Neosynthesized virions are coordinately exported as they are assembled at the cell surface in a secretory process that leaves the host cell fully viable. Non-capsid proteins form structures that facilitate translocation through the inner membrane and outer membranes. A viral single-stranded DNA binding protein coats progeny viral DNA molecules to generate the intracellular precursor for assembly of phage particles as they are extruded through the membranes of the bacterial host. The structural proteins of the virus are anchored in the inner membrane before their incorporation into the phage particle. As assembly proceeds, the phage genome traverses the inner and outer membranes until the entire DNA molecule has been coated and extruded.","definition_xrefs":["VZ:3951","PMID:15567492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-lytic viral release","termid":"GO:0046753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral extrusion","termid":"GO:0099045"}


id: GO:0036093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of germ cells, reproductive cells in multicellular organisms, resulting in the expansion of a cell population.","definition_xrefs":["CL:0000586","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ cell proliferation","termid":"GO:0036093"}


id: GO:0030796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + cycloartenol = (24R)-24-methylcycloart-25-en-3beta-ol + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:13137","EC:2.1.1.142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cycloartenol 24-C-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.142-RXN","KEGG_REACTION:R05760"],"synonyms":[{"name":"S-adenosyl-L-methionine:cycloartenol 24-C-methyltransferase activity","type":"related"},{"name":"sterol C-methyltransferase activity","type":"broad"}],"termid":"GO:0030796"}


id: PBO:0082447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bZIP transcriptional activator of amino acid biosynthetic genes;  activator responds to amino acid starvation; expression is tightly regulated at both the transcriptional and translational levels; contains four upstream open reading frames (uORFs) in 5' untranslated region which regulate translation","termid":"PBO:0082447"}


id: GO:0034763
data:
  {"annotated_genes":["SJAG_03631","SJAG_00296","SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115419,93227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"},{"annotations":[90097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[90098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905530"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of a solute from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transport","termid":"GO:0034762"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"negatively_regulates","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null,"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"negative regulation of transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane transport","type":"exact"},{"name":"inhibition of transmembrane transport","type":"narrow"},{"name":"negative regulation of membrane transport","type":"exact"}],"termid":"GO:0034763","terms_by_termid":{"GO:1905530":null,"GO:1905533":null,"GO:1905949":null}}


id: PBO:0051324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-4 (pseudogene)","termid":"PBO:0051324"}


id: FYPO:0002261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which N-glycan processing is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal N-glycan processing","synonyms":[{"name":"abnormal N-glycan catabolism","type":"related"},{"name":"abnormal N-glycan degradation","type":"related"},{"name":"abnormal N-glycan processing during mitotic cell cycle","type":"related"},{"name":"abnormal N-glycan processing during vegetative growth","type":"exact"},{"name":"abnormal N-linked glycoprotein maturation","type":"exact"}],"termid":"FYPO:0002261"}


id: PBO:0057238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 425","termid":"PBO:0057238"}


id: MONDO:0007542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camurati-Englemann disease (CED) is a rare, clinically variable bone dysplasia syndrome characterized by hyperostosis of the long bones, skull, spine and pelvis, associated with severe pain in the extremities, a wide-based waddling gait, joint contractures, muscle weakness and easy fatigability.","definition_xrefs":["Orphanet:1328"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteosclerosis","termid":"MONDO:0002933"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","termid":"MONDO:0019703"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Camurati-Engelmann disease","secondary_identifiers":["UMLS:C0011989","SCTID:318761000119105","NORD:885","NCIT:C84610","OMIM:131300","ICD10CM:Q78.3","DOID:4997","GARD:1072","ICD9:756.59","MEDGEN:4268","NANDO:2200970"],"synonyms":[{"name":"CAEND","type":"related"},{"name":"CED","type":"related"},{"name":"Camurati-Engelmann disease","type":"exact"},{"name":"Camurati-Engelmann syndrome","type":"exact"},{"name":"Camurati-Englemann disease","type":"exact"},{"name":"DPD1","type":"related"},{"name":"Engelman's disease","type":"exact"},{"name":"Engelmann disease","type":"related"},{"name":"diaphyseal dysplasia","type":"exact"},{"name":"diaphyseal dysplasia 1, progressive","type":"related"},{"name":"progressive diaphyseal dysplasia","type":"exact"}],"termid":"MONDO:0007542","xrefs":{"Monarch":{"xref_id":"0007542"}}}


id: PBO:0079262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat domain 33","termid":"PBO:0079262"}


id: SO:0001120
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of two consecutive residues with dihedral angles. Nest should not have Proline as any residue. Nests frequently occur as parts of other motifs such as Schellman loops.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"polypeptide_nest_motif","secondary_identifiers":["BS:00223"],"synonyms":[{"name":"nest","type":"related"},{"name":"nest_motif","type":"exact"},{"name":"polypeptide nest motif","type":"related"}],"termid":"SO:0001120"}


id: GO:0047099
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + NAD(P)+ + CDP-4-dehydro-3,6-dideoxy-D-glucose = NAD(P)H + CDP-4-dehydro-6-deoxy-D-glucose.","definition_xrefs":["EC:1.17.1.1","MetaCyc:1.17.1.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"CDP-4-dehydro-6-deoxyglucose reductase activity","synonyms":[{"name":"CDP-4-dehydro-3,6-dideoxy-D-glucose:NAD(P)+ 3-oxidoreductase activity","type":"related"},{"name":"CDP-4-keto-6-deoxy-D-glucose-3-dehydrogenase system activity","type":"related"},{"name":"CDP-4-keto-6-deoxyglucose reductase activity","type":"related"},{"name":"CDP-4-keto-deoxy-glucose reductase activity","type":"related"},{"name":"NAD(P)H:CDP-4-keto-6-deoxy-D-glucose oxidoreductase activity","type":"related"},{"name":"cytidine diphosphate 4-keto-6-deoxy-D-glucose-3-dehydrogenase activity","type":"related"},{"name":"cytidine diphospho-4-keto-6-deoxy-D-glucose reductase activity","type":"related"}],"termid":"GO:0047099"}


id: MONDO:0020782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic painless inflammation of the gums. It is characterized by erythema and edema of the gums and bleeding while brushing the teeth.","definition_xrefs":["NCIT:C34474"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingivitis","termid":"MONDO:0002508"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic gingivitis","secondary_identifiers":["icd11.foundation:1542018172","ICD9:523.10","SCTID:72621003","ICD9:523.1","MEDGEN:965","ICD10CM:K05.1","UMLS:C0008684"],"synonyms":[{"name":"Chronic Gingivitis","type":"related"},{"name":"Chronic gingivitis","type":"related"},{"name":"chronic gingivitis","type":"exact"}],"termid":"MONDO:0020782","xrefs":{"Monarch":{"xref_id":"0020782"}}}


id: PBO:0062640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily K member 1 pseudogene","termid":"PBO:0062640"}


id: MONDO:0010947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Budd-Chiari syndrome (BCS) is caused by obstruction of hepatic venous outflow involving either the hepatic veins or the terminal segment of the inferior vena cava.","definition_xrefs":["Orphanet:131"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatic vascular disorder","termid":"MONDO:0002405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"Budd-Chiari syndrome","secondary_identifiers":["ICD10CM:I82.0","NANDO:1200437","SCTID:82385007","MedDRA:10006537","UMLS:C0856761","icd11.foundation:1300118676","ICD9:453.0","GARD:5968","MEDGEN:163632","MESH:D006502","OMIM:600880"],"synonyms":[{"name":"BDCHS","type":"related"},{"name":"Budd-Chiari syndrome","type":"exact"},{"name":"Budd-Chiari syndrome, somatic","type":"exact"},{"name":"membranous obstruction of Inferior vena cava","type":"related"},{"name":"membranous obstruction of the inferior vena cava","type":"related"}],"termid":"MONDO:0010947","xrefs":{"Monarch":{"xref_id":"0010947"}}}


id: GO:1904326
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of circadian sleep/wake cycle, wakefulness.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:10923657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, wakefulness","termid":"GO:0010840"},{"relation_name":"is_a","term_name":"negative regulation of circadian rhythm","termid":"GO:0042754"},{"relation_name":"is_a","term_name":"negative regulation of behavior","termid":"GO:0048521"},{"relation_name":"negatively_regulates","term_name":"circadian sleep/wake cycle, wakefulness","termid":"GO:0042746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of circadian sleep/wake cycle, wakefulness","synonyms":[{"name":"down regulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"down-regulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"downregulation of circadian sleep/wake cycle, wakefulness","type":"exact"},{"name":"inhibition of circadian sleep/wake cycle, wakefulness","type":"narrow"}],"termid":"GO:1904326"}


id: GO:0099003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any vesicle-mediated transport that occurs in a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport","termid":"GO:0016192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"vesicle-mediated transport in synapse","termid":"GO:0099003"}


id: MONDO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pleural cancer (obsolete MONDO:0003309)","termid":"MONDO:0003309","xrefs":{"Monarch":{"xref_id":"0003309"}}}


id: PBO:0042760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 43","termid":"PBO:0042760"}


id: GO:0102709
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N,N-dimethyl-beta-alanine + S-adenosyl-L-methionine = H+ + beta-alanine betaine + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete S-adenosyl-L-methionine:N,N-dimethyl-beta-alanine N-methyltransferase activity (obsolete GO:0102709)","termid":"GO:0102709"}


id: PBO:0050207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 24","termid":"PBO:0050207"}


id: PBO:0056084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LY75-CD302 readthrough","termid":"PBO:0056084"}


id: GO:0070803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of metula development, a process that leads to the formation of metulae. Metulae are elongated mononucleate cells that bud from the surface of the conidiophore tip.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of metula development","termid":"GO:0070802"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"metula development","termid":"GO:0070789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of metula development","termid":"GO:0070803"}


id: PBO:0018028
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae POL2","termid":"PBO:0018028"}


id: FYPO:0008151
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is lower than normal in the pericentromeres. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:21211723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning in heterochromatin","termid":"FYPO:0000855"},{"relation_name":"is_a","term_name":"decreased nucleosome occupancy","termid":"FYPO:0004491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased nucleosome occupancy at centromeric heterochromatin","synonyms":[{"name":"decreased nucleosome occupancy at centromeric region","type":"related"}],"termid":"FYPO:0008151"}


id: GO:0000285
data:
  {"annotated_genes":["SJAG_00638"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74593],"is_not":false,"summary":null,"term":"GO:0000285"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,5-bisphosphate + ADP + H+.","definition_xrefs":["RHEA:13609","EC:2.7.1.150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 5-kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1675910","Reactome:R-HSA-1675921","Reactome:R-HSA-1676168","Reactome:R-HSA-1676134","KEGG_REACTION:R05802","MetaCyc:2.7.1.150-RXN"],"synonyms":[{"name":"ATP:1-phosphatidyl-1D-myo-inositol-3-phosphate 5-phosphotransferase activity","type":"related"},{"name":"phosphatidylinositol 3-phosphate 5-kinase activity","type":"related"},{"name":"phosphatidylinositol-3-phosphate 5-kinase activity","type":"exact"},{"name":"type III PIP kinase activity","type":"related"}],"termid":"GO:0000285","terms_by_termid":{"GO:0000285":null}}


id: PR:Q9P6P8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein YIPF6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21236:SF1","OMA:SCHPO01130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein YIP4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC644.13c","secondary_identifiers":["UniProtKB:Q9P6P8"],"synonyms":[{"name":"Spom972h-YIPF6","type":"exact"},{"name":"YPT-interacting protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P6P8"}


id: GO:0033882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: choloyl-CoA + H2O = cholate + CoA.","definition_xrefs":["EC:3.1.2.27"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"choloyl-CoA hydrolase activity","secondary_identifiers":["RHEA:14541","MetaCyc:3.1.2.27-RXN"],"synonyms":[{"name":"PTE-2","type":"related"},{"name":"chenodeoxycholoyl-coenzyme A thioesterase activity","type":"related"},{"name":"choloyl-coenzyme A thioesterase activity","type":"related"},{"name":"peroxisomal acyl-CoA thioesterase 2 activity","type":"narrow"}],"termid":"GO:0033882"}


id: MONDO:0031057
data:
  {"annotated_genes":["SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87715],"is_not":false,"summary":null,"term":"MONDO:0031057"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, digenic","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620040","UMLS:C5774217","MEDGEN:1823990","DOID:0060984"],"synonyms":[{"name":"DKCD","type":"exact"},{"name":"dyskeratosis congenita, digenic","type":"exact"}],"termid":"MONDO:0031057","terms_by_termid":{"MONDO:0031057":null},"xrefs":{"Monarch":{"xref_id":"0031057"}}}


id: PBO:0045061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG2 antisense RNA 1","termid":"PBO:0045061"}


id: PBO:0048083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 4","termid":"PBO:0048083"}


id: PBO:0001933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PINc domain","termid":"PBO:0001933"}


id: SO:0000427
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The R segment of the three-prime long terminal repeat.","direct_ancestors":[{"relation_name":"is_a","term_name":"R_LTR_region","termid":"SO:0000423"},{"relation_name":"is_a","term_name":"five_prime_LTR_component","termid":"SO:0000850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R_five_prime_LTR_region","synonyms":[{"name":"R 5' long term repeat region","type":"exact"},{"name":"R five prime LTR region","type":"exact"}],"termid":"SO:0000427"}


id: MONDO:1012198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ocular squamous cell carcinoma, non-human animal","termid":"MONDO:1011812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular squamous cell carcinoma, goat","secondary_identifiers":["OMIA:000735-9925"],"termid":"MONDO:1012198","xrefs":{"Monarch":{"xref_id":"1012198"}}}


id: MONDO:0031054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 48, without situs inversus","secondary_identifiers":["OMIM:620032","UMLS:C5774214","MEDGEN:1823987"],"synonyms":[{"name":"CILD48","type":"exact"},{"name":"ciliary dyskinesia, primary, 48, without situs inversus","type":"exact"}],"termid":"MONDO:0031054","xrefs":{"Monarch":{"xref_id":"0031054"}}}


id: PBO:0049259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"goosecoid homeobox","termid":"PBO:0049259"}


id: PR:O74737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-binding protein rid1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1709.12","synonyms":[{"name":"Spom972h-rid1","type":"exact"}],"termid":"PR:O74737"}


id: FYPO:0006411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype in which the levels of RNAs that encode histones, which normally vary over the course of the mitotic cell cycle, remain constant. All RNAs encoding histones, or one or more specific histone RNA, may be affected.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA level oscillation during mitotic cell cycle","termid":"FYPO:0004988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished histone RNA level oscillation during mitotic cell cycle","synonyms":[{"name":"abolished histone RNA level fluctuation during mitotic cell cycle","type":"exact"},{"name":"abolished histone RNA level oscillation during vegetative growth","type":"related"},{"name":"abolished histone mRNA level oscillation during mitotic cell cycle","type":"exact"},{"name":"abolished histone transcript level oscillation during mitotic cell cycle","type":"exact"},{"name":"abolished periodic expression of histone RNA during mitotic cell cycle","type":"exact"},{"name":"histone RNA level oscillation abolished during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0006411"}


id: FYPO:0005793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is bent along the long axis. In a bent cell, the long axis has one or more angles, rather than following a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"bent cell","synonyms":[{"name":"cell morphology, bent","type":"exact"}],"termid":"FYPO:0005793"}


id: PBO:0078984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon TGA) 4-1","termid":"PBO:0078984"}


id: GO:0035527
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-hydroxypropanoate + NADP+ = 3-oxopropanoate + H+ + NADPH.","definition_xrefs":["RHEA:26438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3-hydroxypropionate dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.298","KEGG_REACTION:R09289","MetaCyc:RXN-8974"],"synonyms":[{"name":"3-hydroxypropanoate dehydrogenase (NADP+) activity","type":"exact"},{"name":"3-hydroxypropanoate:NADP+ oxidoreductase","type":"related"},{"name":"3-hydroxypropionate:NADP+ oxidoreductase","type":"related"}],"termid":"GO:0035527"}


id: PBO:0051783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F1","termid":"PBO:0051783"}


id: GO:1990306
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of RSP5 and BUL components. It polyubiquinates plasma membrane transporters and permeases, required for their endocytosis and subsequent degradation in the vacuole. BUL1 or BUL2, respectively, bind to the target protein, enabling ubiquitylation by Rsp5. Phosphorylation of BUL proteins results in binding to 14-3-3 proteins, protecting the permeases from down-regulation.","definition_xrefs":["GOC:bhm","PMID:9931424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RSP5-BUL ubiquitin ligase complex","synonyms":[{"name":"RSP5-BUL1 complex","type":"exact"},{"name":"RSP5-BUL2 complex","type":"related"}],"termid":"GO:1990306"}


id: PBO:0048468
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glial cells missing transcription factor 1","termid":"PBO:0048468"}


id: PBO:0068215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 522","termid":"PBO:0068215"}


id: GO:0005813
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structure comprised of a core structure (in most organisms, a pair of centrioles) and peripheral material from which a microtubule-based structure, such as a spindle apparatus, is organized. Centrosomes occur close to the nucleus during interphase in many eukaryotic cells, though in animal cells it changes continually during the cell-division cycle.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"centrosome","secondary_identifiers":["Wikipedia:Centrosome"],"termid":"GO:0005813"}


id: PBO:0040348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 5","termid":"PBO:0040348"}


id: PBO:0079280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase","termid":"PBO:0079280"}


id: MONDO:1012962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cataract that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract, non-human animal","termid":"MONDO:1012962","xrefs":{"Monarch":{"xref_id":"1012962"}}}


id: PBO:0090088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-glycosylation protein Eos1","termid":"PBO:0090088"}


id: FYPO:0006073
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of an RNA catabolic process that specifically degrades small RNA molecules is decreased.","definition_xrefs":["PomBase:mah","PMID:28541282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process during vegetative growth","termid":"FYPO:0002137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased small RNA degradation","synonyms":[{"name":"decreased degradation of sRNA","type":"exact"},{"name":"decreased sRNA 3' degradation","type":"exact"},{"name":"decreased small RNA catabolic process","type":"exact"},{"name":"decreased small RNA catabolism","type":"exact"},{"name":"decreased small RNA degradation during mitotic cell cycle","type":"related"},{"name":"decreased small RNA degradation during vegetative growth","type":"exact"},{"name":"decreased small regulatory RNA 3' degradation","type":"exact"},{"name":"reduced small RNA degradation","type":"exact"}],"termid":"FYPO:0006073"}


id: GO:0016664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces an iron-sulfur protein.","definition_xrefs":["EC:1.7.7.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","termid":"GO:0016661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulfur protein as acceptor","synonyms":[{"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, iron-sulphur protein as acceptor","type":"exact"}],"termid":"GO:0016664"}


id: PR:O13988
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protection of telomeres protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR14513:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protection of telomeres protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26H5.06","secondary_identifiers":["UniProtKB:O13988"],"synonyms":[{"name":"SPAC26H5.06","type":"related"},{"name":"Spom972h-POT1","type":"exact"}],"termid":"PR:O13988"}


id: PBO:0059818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 44","termid":"PBO:0059818"}


id: GO:0046902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the passage or uptake of molecules by the mitochondrial membrane.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial membrane organization","termid":"GO:0007006"},{"relation_name":"is_a","term_name":"regulation of membrane permeability","termid":"GO:0090559"},{"relation_name":"part_of","term_name":"mitochondrial transport","termid":"GO:0006839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0007005","GO:0061024","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability","synonyms":[{"name":"regulation of mitochondrial envelope permeability","type":"related"},{"name":"regulation of transport across mitochondrial membrane","type":"exact"}],"termid":"GO:0046902"}


id: PATO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000697 relative texture value (obsolete PATO:0000697)","termid":"PATO:0000697"}


id: GO:0052155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which an organism effects a change that affects cell-based immune response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete perturbation of host cell-mediated immune response (obsolete GO:0052155)","synonyms":[{"name":"modulation by organism of cell-mediated immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by organism of host cell-based immune response","type":"exact"},{"name":"modulation by symbiont of host cell-mediated immune response","type":"exact"}],"termid":"GO:0052155"}


id: PBO:0087150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-dependent DExD/H-box ATPase; required for activation of spliceosome before first transesterification step in RNA splicing; implicated in rearranging and proofreading snRNA structure in catalytic activation of spliceosome; ortholog of human protein DHX16","termid":"PBO:0087150"}


id: PBO:0108895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 8","termid":"PBO:0108895"}


id: MONDO:0008122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete olivopontocerebellar atrophy 5 (obsolete MONDO:0008122)","termid":"MONDO:0008122","xrefs":{"Monarch":{"xref_id":"0008122"}}}


id: MONDO:0025556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"allergic asthma","termid":"MONDO:0004784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"isocyanate induced asthma","secondary_identifiers":["ICD9:506.3","SCTID:404808000","DOID:0040041","MEDGEN:729881","UMLS:C1321273"],"synonyms":[{"name":"isocyanates allergic asthma","type":"related"}],"termid":"MONDO:0025556","xrefs":{"Monarch":{"xref_id":"0025556"}}}


id: PBO:0058889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10526","termid":"PBO:0058889"}


id: PBO:0063555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternally expressed 13","termid":"PBO:0063555"}


id: GO:0008768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-sugar + H2O = UMP + sugar 1-phosphate.","definition_xrefs":["EC:3.6.1.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"UDP-sugar diphosphatase activity","secondary_identifiers":["Reactome:R-HSA-6810464","MetaCyc:UDPSUGARHYDRO-RXN"],"synonyms":[{"name":"UDP-sugar hydrolase activity","type":"related"},{"name":"UDP-sugar pyrophosphatase activity","type":"related"},{"name":"UDP-sugar sugarphosphohydrolase activity","type":"related"},{"name":"nucleosidediphosphate-sugar diphosphatase activity","type":"broad"},{"name":"nucleosidediphosphate-sugar pyrophosphatase activity","type":"broad"}],"termid":"GO:0008768"}


id: MOD:01079
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-[(acetylamino)methyl]-L-cysteine.","definition_xrefs":["PubMed:8572278","DeltaMass:218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(acetylamino)methyl-L-cysteine","synonyms":[{"name":"Acetamidomethyl Cystenyl","type":"exact"},{"name":"Acm-Cys","type":"exact"},{"name":"N-(hydroxymethyl)acetamide derivatized L-cysteine","type":"exact"},{"name":"S-(acetamido)methyl-L-cysteine","type":"exact"}],"termid":"MOD:01079"}


id: GO:0035078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process induced by the steroid hormone 20-hydroxyecdysone (ecdysone) that directly activates any of the steps required for programmed cell death.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"induction of programmed cell death by hormones","termid":"GO:0035081"},{"relation_name":"part_of","term_name":"response to ecdysone","termid":"GO:0035075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of programmed cell death by ecdysone","termid":"GO:0035078"}


id: GO:0052222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052222)","synonyms":[{"name":"negative aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052222"}


id: SO:0001889
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature amplification of a region containing a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_amplification","termid":"SO:0001880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_amplification","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:transcript_amplification","type":"exact"},{"name":"transcript amplification","type":"exact"}],"termid":"SO:0001889"}


id: PATO:0002035
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being on the same side in relation to another structure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ipsilateral to","synonyms":[{"name":"ipsilateral","type":"exact"}],"termid":"PATO:0002035"}


id: GO:0034315
data:
  {"annotated_genes":["SJAG_03455"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of actin nucleation mediated by the Arp2/3 complex and interacting proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin nucleation","termid":"GO:0051125"},{"relation_name":"regulates","term_name":"Arp2/3 complex-mediated actin nucleation","termid":"GO:0034314"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03455":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010","GO:0030036"],"is_obsolete":false,"name":"regulation of Arp2/3 complex-mediated actin nucleation","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0034315","terms_by_termid":{"GO:0034316":null}}


id: PBO:0056600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm1 nuclear protein","termid":"PBO:0056600"}


id: MONDO:0019872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal trisomy 3p is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 3, with highly variable phenotype principally characterized by craniofacial dysmorphism (incl. brachy-/microcephaly, square facies, frontal bossing, bitemporal indentation, hypertelorism/telecanthus, low-set and/or dysmorphic ears, short nose with broad, flat nasal bridge, prominent cheeks and philtrum, downturned corners of mouth, micrognathia/retrognathia, short neck) associated with psychomotor delay, moderate to severe intellectual disability, cardiac (e.g. patent ductus arteriosus) and urogenital (e.g. renal hypoplasia, hypogenitalism) abnormalities, as well as seizures and presence of whorls on fingers.","definition_xrefs":["Orphanet:96071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 3","termid":"MONDO:0016940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal trisomy 3p","secondary_identifiers":["SCTID:764519007","MEDGEN:1637379","GARD:19305","UMLS:C4706938"],"synonyms":[{"name":"distal duplication 3p","type":"exact"},{"name":"distal trisomy type 3p","type":"exact"},{"name":"telomeric duplication 3p","type":"exact"},{"name":"trisomy 3pter","type":"exact"}],"termid":"MONDO:0019872","xrefs":{"Monarch":{"xref_id":"0019872"}}}


id: MONDO:0957294
data:
  {"annotated_genes":["SJAG_00566"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88312],"is_not":false,"summary":null,"term":"MONDO:0957294"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure syndrome, telomere-related, 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620400","UMLS:C5830560","MEDGEN:1841196"],"termid":"MONDO:0957294","terms_by_termid":{"MONDO:0957294":null},"xrefs":{"Monarch":{"xref_id":"0957294"}}}


id: GO:0140134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism alters or subverts the circulation of blood in another organism via the action of a venom.","definition_xrefs":["PMID:31370142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of biological process","termid":"GO:0035738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated perturbation of blood circulation","synonyms":[{"name":"venom-mediated perturbation of cardiovascular system","type":"broad"},{"name":"venom-mediated perturbation of circulatory system process","type":"broad"}],"termid":"GO:0140134"}


id: PBO:0050298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 like 3","termid":"PBO:0050298"}


id: GO:0103092
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(7'-methylthio)heptylmalate = 3-(7'-methylthio)heptylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthioalkylmalate isomerase activity (obsolete GO:0103092)","termid":"GO:0103092"}


id: PBO:0087822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIID subunit (65 kDa); involved in RNA polymerase II transcription initiation","termid":"PBO:0087822"}


id: PBO:0090789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII vesicle coat component Erp5/Erp6/Erp1","termid":"PBO:0090789"}


id: GO:0035285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Division of an appendage, an organ or part that is attached to the main body of an organism, into a series of semi-repetitive parts or segments. Most arthropod appendages, such as the legs and antennae, are visibly segmented.","definition_xrefs":["PMID:10357895"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segmentation","termid":"GO:0035282"},{"relation_name":"part_of","term_name":"appendage morphogenesis","termid":"GO:0035107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"appendage segmentation","termid":"GO:0035285"}


id: GO:1901965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endoplasmic reticulum to chloroplast.","definition_xrefs":["GOC:TermGenie","PMID:18689504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"endoplasmic reticulum to chloroplast transport","synonyms":[{"name":"ER to chloroplast transport","type":"exact"}],"termid":"GO:1901965"}


id: PBO:0001225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein (predicted)","termid":"PBO:0001225"}


id: MONDO:0031169
data:
  {"annotated_genes":["SJAG_04528"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100325"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondylometaphyseal dysplasia","termid":"MONDO:0016763"},{"relation_name":"is_a","term_name":"TRIP11-related skeletal dysplasia","termid":"MONDO:1040009"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04528":null},"genotype_count":0,"is_obsolete":false,"name":"odontochondrodysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:411198","UMLS:C2745953","OMIMPS:184260"],"termid":"MONDO:0031169","terms_by_termid":{"MONDO:0100325":null},"xrefs":{"Monarch":{"xref_id":"0031169"}}}


id: MONDO:0006437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete superficial fibromatosis (obsolete MONDO:0006437)","termid":"MONDO:0006437","xrefs":{"Monarch":{"xref_id":"0006437"}}}


id: GO:1900487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of [2Fe-2S] cluster assembly.","definition_xrefs":["GOC:TermGenie","GOC:pr","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron-sulfur cluster assembly","termid":"GO:1903329"},{"relation_name":"regulates","term_name":"[2Fe-2S] cluster assembly","termid":"GO:0044571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016226"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016226","GO:0044085"],"is_obsolete":false,"name":"regulation of [2Fe-2S] cluster assembly","synonyms":[{"name":"regulation of 2Fe-2S cluster assembly","type":"exact"},{"name":"regulation of [2Fe-2S] cluster biosynthetic process","type":"related"}],"termid":"GO:1900487"}


id: PBO:0041434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C9","termid":"PBO:0041434"}


id: MONDO:0020261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurological disease with abnormal eye movements (obsolete MONDO:0020261)","secondary_identifiers":["Orphanet:98691"],"synonyms":[{"name":"abnormal eye movements","type":"exact"}],"termid":"MONDO:0020261","xrefs":{"Monarch":{"xref_id":"0020261"}}}


id: PBO:0085602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in cellular response to oxidative stress; required for oxidation of specific cysteine residues of transcription factor Yap1p, resulting in nuclear localization of Yap1p in response to stress; YBP1 has a paralog, YBP2, that arose from the whole genome duplication","termid":"PBO:0085602"}


id: PBO:0075450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 3","termid":"PBO:0075450"}


id: PBO:0038271
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_doi","termid":"PBO:0038271"}


id: MONDO:0007125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A developmental abnormality in which the bottom of the tongue is attached to the floor of the mouth.","definition_xrefs":["NCIT:C124538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tongue disorder","termid":"MONDO:0001165"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyloglossia","secondary_identifiers":["MESH:C562396","ICD9:750.0","SCTID:67787004","icd11.foundation:1838543063","UMLS:C0152415","MESH:D000072676","ICD10CM:Q38.1","MEDGEN:56288","DOID:0060604","OMIM:106280"],"synonyms":[{"name":"'tongue-Tie'","type":"related"},{"name":"FUSED to floor of mouth","type":"exact"},{"name":"ankyloglossia","type":"exact"},{"name":"tongue-tie","type":"exact"}],"termid":"MONDO:0007125","xrefs":{"Monarch":{"xref_id":"0007125"}}}


id: GO:0004409
data:
  {"annotated_genes":["SJAG_01574"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65558],"is_not":false,"summary":null,"term":"GO:0004409"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (-)-homoisocitrate = cis-homoaconitate + H2O.","definition_xrefs":["EC:4.2.1.36","RHEA:15485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"homoaconitate hydratase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R04371","MetaCyc:HOMOACONITATE-HYDRATASE-RXN"],"synonyms":[{"name":"(1R,2S)-1-hydroxybutane-1,2,4-tricarboxylate hydro-lyase [(Z)-but-1-ene-1,2,4-tricarboxylate-forming]","type":"related"},{"name":"2-hydroxybutane-1,2,4-tricarboxylate hydro-lyase activity","type":"related"},{"name":"HACN activity","type":"related"},{"name":"Lys4","type":"related"},{"name":"LysF","type":"related"},{"name":"cis-homoaconitase activity","type":"related"},{"name":"homoaconitase activity","type":"related"}],"termid":"GO:0004409","terms_by_termid":{"GO:0004409":null}}


id: PBO:0045412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental pluripotency associated 4 pseudogene 1","termid":"PBO:0045412"}


id: PBO:0058500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692b","termid":"PBO:0058500"}


id: GO:0030543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which copies of the 2-micrometer plasmid, found in fungi such as Saccharomyces, are distributed to daughter cells upon cell division.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasmid partitioning","termid":"GO:0030541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-micrometer plasmid partitioning","termid":"GO:0030543"}


id: PBO:0047405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 43","termid":"PBO:0047405"}


id: MONDO:0014687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the HGSNAT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"HGSNAT-related retinopathy","termid":"MONDO:1040040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 73","secondary_identifiers":["ICD10CM:H35.5","DOID:0110389","MEDGEN:907690","OMIM:616544","UMLS:C4225287","GARD:16135"],"synonyms":[{"name":"HGSNAT retinitis pigmentosa","type":"exact"},{"name":"RP73","type":"exact"},{"name":"retinitis pigmentosa 73","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in HGSNAT","type":"exact"},{"name":"retinitis pigmentosa type 73","type":"exact"}],"termid":"MONDO:0014687","xrefs":{"Monarch":{"xref_id":"0014687"}}}


id: GO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the second transesterification reaction of U2-type spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure. The catalytic site is thought to be formed by U6 and/or U2 snRNAs and/or associated proteins.","definition_xrefs":["GOC:krc","ISBN:0879695897"],"gene_count":0,"genotype_count":0,"name":"obsolete second U2-type spliceosomal transesterification activity (obsolete GO:0000364)","synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"second U2-type spliceosomal transesterification activity","type":"exact"}],"termid":"GO:0000364"}


id: MONDO:0002160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral palsy (obsolete MONDO:0002160)","termid":"MONDO:0002160","xrefs":{"Monarch":{"xref_id":"0002160"}}}


id: PBO:0116774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste receptor cell gene 1, pseudogene","termid":"PBO:0116774"}


id: GO:0047371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetate + butanoyl-CoA = acetoacetyl-CoA + butanoate.","definition_xrefs":["RHEA:12961","EC:2.8.3.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016782"],"is_obsolete":false,"name":"butyrate-acetoacetate CoA-transferase activity","secondary_identifiers":["KEGG_REACTION:R01365","MetaCyc:2.8.3.9-RXN"],"synonyms":[{"name":"butanoyl-CoA:acetoacetate CoA-transferase activity","type":"related"},{"name":"butyryl coenzyme A-acetoacetate coenzyme A-transferase activity","type":"related"},{"name":"butyryl-CoA-acetoacetate CoA-transferase activity","type":"related"}],"termid":"GO:0047371"}


id: GO:0008863
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formate + NAD+ = CO2 + NADH.","definition_xrefs":["EC:1.17.1.9","RHEA:15985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"formate dehydrogenase (NAD+) activity","secondary_identifiers":["GO:0018476","KEGG_REACTION:R00519","UM-BBD_reactionID:r0103","MetaCyc:1.2.1.2-RXN"],"synonyms":[{"name":"NAD-dependent formate dehydrogenase","type":"related"},{"name":"NAD-formate dehydrogenase","type":"related"},{"name":"formate dehydrogenase (NAD)","type":"related"},{"name":"formate hydrogenlyase","type":"related"},{"name":"formate-NAD oxidoreductase","type":"related"},{"name":"formic acid dehydrogenase","type":"related"},{"name":"formic hydrogen-lyase","type":"related"}],"termid":"GO:0008863"}


id: PBO:0067474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 605, pseudogene","termid":"PBO:0067474"}


id: GO:0047934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucose + NAD+ = D-glucono-1,5-lactone + NADH.","definition_xrefs":["EC:1.1.1.118","MetaCyc:GLUCOSE-1-DEHYDROGENASE-NAD+-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose 1-dehydrogenase [NAD(P)+] activity","termid":"GO:0047936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glucose 1-dehydrogenase (NAD+) activity","secondary_identifiers":["RHEA:14293"],"synonyms":[{"name":"D-aldohexose dehydrogenase activity","type":"related"},{"name":"D-glucose:NAD oxidoreductase activity","type":"related"},{"name":"D-glucose:NAD+ 1-oxidoreductase activity","type":"related"}],"termid":"GO:0047934"}


id: GO:0009750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fructose stimulus.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to fructose","synonyms":[{"name":"response to fructose stimulus","type":"exact"}],"termid":"GO:0009750"}


id: GO:0033549
data:
  {"annotated_genes":["SJAG_02000","SJAG_03185","SJAG_03893","SJAG_02433","SJAG_03263","SJAG_02013"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99639],"is_not":false,"summary":null,"term":"GO:0033549"},{"annotations":[119147,97987],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990439"},{"annotations":[73036,97049,93679],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033550"},{"annotations":[73031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017017"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a phosphorylated MAP kinase + H2O = a MAP kinase + phosphate.","definition_xrefs":["PMID:12184814","PMID:17208316","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoprotein phosphatase activity","termid":"GO:0004721"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02000":null,"SJAG_02013":null,"SJAG_02433":null,"SJAG_03185":null,"SJAG_03263":null,"SJAG_03893":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0004721","GO:0016787","GO:0016788","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"MAP kinase phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"MAPK phosphatase activity","type":"exact"}],"termid":"GO:0033549","terms_by_termid":{"GO:0017017":null,"GO:0033549":null,"GO:0033550":null,"GO:1990439":null}}


id: GO:1901190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of formation of translation initiation ternary complex.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"formation of translation initiation ternary complex","termid":"GO:0001677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"regulation of formation of translation initiation ternary complex","synonyms":[{"name":"regulation of translation initiation ternary complex assembly","type":"exact"}],"termid":"GO:1901190"}


id: GO:0097069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a thyroxine stimulus.","definition_xrefs":["PMID:9916872","GOC:sjw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"cellular response to thyroid hormone stimulus","termid":"GO:0097067"},{"relation_name":"is_a","term_name":"response to thyroxine","termid":"GO:0097068"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"cellular response to L-phenylalanine derivative","termid":"GO:1904387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to thyroxine stimulus","synonyms":[{"name":"cellular response to T4 stimulus","type":"exact"}],"termid":"GO:0097069"}


id: MOD:00706
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts L-tyrosine to 2,3-didehydrotyrosine.","definition_xrefs":["Unimod:401#Y"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenated tyrosine","synonyms":[{"name":"MOD_RES 2,3-didehydrotyrosine","type":"exact"},{"name":"dHTyr","type":"exact"}],"termid":"MOD:00706"}


id: GO:0031541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of anthocyanins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of flavonoid biosynthetic process","termid":"GO:0009964"},{"relation_name":"is_a","term_name":"negative regulation of anthocyanin metabolic process","termid":"GO:0031538"},{"relation_name":"is_a","term_name":"regulation of anthocyanin biosynthetic process","termid":"GO:0031540"},{"relation_name":"negatively_regulates","term_name":"anthocyanin-containing compound biosynthetic process","termid":"GO:0009718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of anthocyanin biosynthetic process","synonyms":[{"name":"down regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"down-regulation of anthocyanin biosynthetic process","type":"exact"},{"name":"downregulation of anthocyanin biosynthetic process","type":"exact"},{"name":"inhibition of anthocyanin biosynthetic process","type":"narrow"},{"name":"negative regulation of anthocyanin anabolism","type":"exact"},{"name":"negative regulation of anthocyanin biosynthesis","type":"exact"},{"name":"negative regulation of anthocyanin formation","type":"exact"},{"name":"negative regulation of anthocyanin synthesis","type":"exact"}],"termid":"GO:0031541"}


id: PR:O74316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15D4.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C15D4.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15D4.11c","synonyms":[{"name":"Spom972h-SPBC15D4.11c","type":"exact"}],"termid":"PR:O74316"}


id: PBO:0079090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-3","termid":"PBO:0079090"}


id: SO:0001630
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant in which a change has occurred within the region of the splice site, either within 1-3 bases of the exon or 3-8 bases of the intron.","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_region_variant","secondary_identifiers":["http://snpeff.sourceforge.net/SnpEff_manual.html","http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"ANNOVAR:splicing","type":"related"},{"name":"Jannovar:splice_region_variant","type":"exact"},{"name":"VAAST:splice_region_variant","type":"exact"},{"name":"VEP:splice_region_variant","type":"exact"},{"name":"snpEff:SPLICE_SITE_BRANCH","type":"related"},{"name":"snpEff:SPLICE_SITE_BRANCH_U12","type":"related"},{"name":"snpEff:SPLICE_SITE_REGION","type":"exact"},{"name":"splice region variant","type":"exact"}],"termid":"SO:0001630"}


id: PBO:0000888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial coenzyme A/ diphosphate transporter (predicted)","termid":"PBO:0000888"}


id: GO:0035656
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The activity of linking kinesins, cytoplasmic proteins responsible for moving vesicles and organelles towards the distal end of microtubules, to melanosomes.","definition_xrefs":["PMID:19841138"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin-associated melanosomal adaptor activity (obsolete GO:0035656)","synonyms":[{"name":"kinesin-melanosome adaptor activity","type":"exact"}],"termid":"GO:0035656"}


id: MONDO:0006912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The presence of gas within the wall of the large or small intestine.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"pneumatosis cystoides intestinalis","secondary_identifiers":["ICD9:569.89","SCTID:17465007","DOID:13249","EFO:1001113","MedDRA:10049732","UMLS:C0032266","MESH:D011006","MEDGEN:18527"],"termid":"MONDO:0006912","xrefs":{"Monarch":{"xref_id":"0006912"}}}


id: PBO:0066009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RALY heterogeneous nuclear ribonucleoprotein","termid":"PBO:0066009"}


id: PBO:0116764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNTB1 antisense RNA 1","termid":"PBO:0116764"}


id: PBO:0067701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal pseudogene 9","termid":"PBO:0067701"}


id: PBO:0068701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 82, pseudogene","termid":"PBO:0068701"}


id: GO:0070990
data:
  {"annotated_genes":["SJAG_02279","SJAG_03291","SJAG_04914","SJAG_02558"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72420,89433],"is_not":false,"summary":null,"term":"GO:0070990"},{"annotations":[72214,115916],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990446"},{"annotations":[115917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990447"}]},"cv_name":"molecular_function","definition":"Binding to a small nuclear ribonucleoprotein particle.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02279":null,"SJAG_02558":null,"SJAG_03291":null,"SJAG_04914":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"snRNP binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070990","terms_by_termid":{"GO:0070990":null,"GO:1990446":null,"GO:1990447":null}}


id: FYPO:0002236
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more sterol esters measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular sterol ester level","synonyms":[{"name":"normal cellular sterol ester level during mitotic cell cycle","type":"related"},{"name":"normal cellular sterol ester level during vegetative growth","type":"exact"},{"name":"normal level of sterol ester in cell","type":"exact"}],"termid":"FYPO:0002236"}


id: PBO:0086127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for high temperature survival during stationary phase; not required for growth on nonfermentable carbon sources","termid":"PBO:0086127"}


id: PBO:0074429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 29","termid":"PBO:0074429"}


id: PBO:0071584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a like","termid":"PBO:0071584"}


id: GO:0015182
data:
  {"annotated_genes":["SJAG_04725","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104819,112075],"is_not":false,"summary":null,"term":"GO:0015182"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-asparagine from one side of a membrane to the other. L-asparagine is the L-enantiomer of alpha-aminosuccinamic acid.","definition_xrefs":["ISBN:0198506732","ISBN:0815340729","GOC:go_curators","GOC:jsg","GOC:mah","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"neutral L-amino acid transmembrane transporter activity","termid":"GO:0015175"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"L-asparagine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-asparagine transporter activity","type":"broad"},{"name":"asparagine/glutamine permease activity","type":"narrow"}],"termid":"GO:0015182","terms_by_termid":{"GO:0015182":null}}


id: PBO:0064040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 74","termid":"PBO:0064040"}


id: GO:0060100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the internalization of bacteria, immune complexes and other particulate matter or of an apoptotic cell by phagocytosis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of phagocytosis, engulfment","termid":"GO:0060099"},{"relation_name":"is_a","term_name":"positive regulation of membrane invagination","termid":"GO:1905155"},{"relation_name":"positively_regulates","term_name":"phagocytosis, engulfment","termid":"GO:0006911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phagocytosis, engulfment","termid":"GO:0060100"}


id: MONDO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A fruit allergy triggered by Cucumis melo plant fruit food product.","definition_xrefs":["DOID:0060509"],"gene_count":0,"genotype_count":0,"name":"obsolete melon allergy (obsolete MONDO:0000784)","synonyms":[{"name":"Cucumis melo fruit allergy","type":"exact"}],"termid":"MONDO:0000784","xrefs":{"Monarch":{"xref_id":"0000784"}}}


id: MONDO:0975875
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 10, autosomal recessive","secondary_identifiers":["OMIM:621018"],"termid":"MONDO:0975875","xrefs":{"Monarch":{"xref_id":"0975875"}}}


id: PBO:0077449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 182","termid":"PBO:0077449"}


id: GO:0031605
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The subunits forming the outer ring of the core complex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome core complex, alpha-subunit complex (obsolete GO:0031605)","termid":"GO:0031605"}


id: PBO:0034608
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_number_of_cells_with_1C_DNA_content","termid":"PBO:0034608"}


id: PBO:0047423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and WD repeat domain containing 12","termid":"PBO:0047423"}


id: MONDO:0012083
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant nonsyndromic deafness in which the cause of the disease is a mutation in the GRHL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0019497"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 28","secondary_identifiers":["MESH:C563890","OMIM:608641","UMLS:C1837640","MEDGEN:324846","DOID:0110557","GARD:18124"],"synonyms":[{"name":"DFNA28","type":"narrow"},{"name":"GRHL2 autosomal dominant nonsyndromic deafness","type":"narrow"},{"name":"autosomal dominant deafness 28","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 28","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness caused by mutation in GRHL2","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 28","type":"narrow"},{"name":"deafness, autosomal dominant 28","type":"narrow"},{"name":"deafness, autosomal dominant type 28","type":"narrow"}],"termid":"MONDO:0012083","xrefs":{"Monarch":{"xref_id":"0012083"}}}


id: MONDO:0005325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the radius bone in which the continuity of the bone is broken.","definition_xrefs":["EFO:0003957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radius fracture","secondary_identifiers":["MESH:D011885","SCTID:12676007"],"termid":"MONDO:0005325","xrefs":{"Monarch":{"xref_id":"0005325"}}}


id: PBO:0075191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 3","termid":"PBO:0075191"}


id: PBO:0087642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GINS complex (Sld5p, Psf1p, Psf2p, Psf3p); complex is localized to DNA replication origins and implicated in assembly of the DNA replication machinery","termid":"PBO:0087642"}


id: SO:0000694
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"SNPs are single base pair positions in genomic DNA at which different sequence alternatives exist in normal individuals in some population(s), wherein the least frequent variant has an abundance of 1% or greater.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SNV","termid":"SO:0001483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNP","synonyms":[{"name":"single nucleotide polymorphism","type":"exact"}],"termid":"SO:0000694"}


id: PBO:0073139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B2, pseudogene","termid":"PBO:0073139"}


id: PATO:0001178
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A resistance quality inhering in a bearer by virtue of the bearer's resistance to a stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to","termid":"PATO:0001046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"resistant to","synonyms":[{"name":"resistant","type":"exact"}],"termid":"PATO:0001178"}


id: PBO:0082006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 5 pseudogene 2","termid":"PBO:0082006"}


id: GO:0051403
data:
  {"annotated_genes":["SJAG_01787","SJAG_04522","SJAG_01181","SJAG_00424","SJAG_04825","SJAG_02392","SJAG_00610","SJAG_01114","SJAG_03263","SJAG_04666","SJAG_04551","SJAG_03753","SJAG_03969","SJAG_03705","SJAG_05000"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104159,113031,66494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000196"},{"annotations":[101451,105815,120398,109645,109077,97862],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903138"},{"annotations":[92777,94427,91446,90091,119971,69627],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"A MAPK cascade that starts with the activation of a stress-activated MAP kinase cascade.","definition_xrefs":["PMID:15936270","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"MAPK cascade","termid":"GO:0000165"},{"relation_name":"is_a","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01181":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03705":null,"SJAG_03753":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"stress-activated MAPK cascade","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-450294"],"synonyms":[{"name":"MAPK11 cascade","type":"narrow"},{"name":"MAPK12 cascade","type":"narrow"},{"name":"MAPK13 cascade","type":"narrow"},{"name":"MAPK14 cascade","type":"related"},{"name":"SAPK cascade","type":"broad"},{"name":"stress-activated MAPK signaling pathway","type":"exact"},{"name":"stress-activated MAPK signalling pathway","type":"exact"},{"name":"stress-activated MAPKKK cascade","type":"exact"},{"name":"stress-activated MAPKKK signaling pathway","type":"exact"},{"name":"stress-activated MAPKKK signalling pathway","type":"exact"}],"termid":"GO:0051403","terms_by_termid":{"GO:0000196":null,"GO:1903138":null,"GO:1903139":null}}


id: PBO:0050870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDH1 antisense RNA 1","termid":"PBO:0050870"}


id: PBO:0088505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine-3) methyltransferase Trm140","termid":"PBO:0088505"}


id: PATO:0001555
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"The number of parts of a particular type that the bearer entity has. This is a relational quality, and thus holds between two entities: the bearer of the quality, and the type of parts.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical object quality","termid":"PATO:0001241"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has number of","secondary_identifiers":["OBO_REL:has_part"],"synonyms":[{"name":"cardinality","type":"related"},{"name":"extra or missing physical or functional parts","type":"exact"},{"name":"has or lacks parts of type","type":"exact"},{"name":"mereological quality","type":"exact"},{"name":"number","type":"related"},{"name":"number of","type":"exact"}],"termid":"PATO:0001555"}


id: PBO:0042270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6 pseudogene 5","termid":"PBO:0042270"}


id: PBO:0084718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane Mg(2+) channel; required for maintenance of intramitochondrial Mg(2+) concentrations at the correct level to support splicing of group II introns; similar to bacterial CorA","termid":"PBO:0084718"}


id: PBO:0004162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule affinity-regulating kinase Kin1","termid":"PBO:0004162"}


id: MONDO:0007641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Futcher line (obsolete MONDO:0007641)","secondary_identifiers":["OMIM:137000"],"synonyms":[{"name":"Futcher line","type":"exact"},{"name":"Voigt lines","type":"exact"},{"name":"pigmentary demarcation lines","type":"exact"}],"termid":"MONDO:0007641","xrefs":{"Monarch":{"xref_id":"0007641"}}}


id: SO:0000686
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation whereby the chromosomes carrying non-homologous centromeres may be recovered independently. These chromosomes are described as translocation elements. This occurs for some translocations, particularly but not exclusively, reciprocal translocations.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation_element","synonyms":[{"name":"translocation element","type":"exact"}],"termid":"SO:0000686"}


id: PBO:0072992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm polycomb group protein like 1","termid":"PBO:0072992"}


id: GO:0102208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-(all-trans-polyprenyl)benzene-1,2-diol + S-adenosyl-L-methionine = a 2-methoxy-6-(all-trans-polyprenyl)phenol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz","RHEA:31411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"2-polyprenyl-6-hydroxyphenol methylase activity","secondary_identifiers":["MetaCyc:RXN-12160","EC:2.1.1.222"],"termid":"GO:0102208"}


id: PR:O59826
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A voltage-gated potassium channel subunit beta-1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage-gated potassium channel subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.06","secondary_identifiers":["UniProtKB:O59826"],"synonyms":[{"name":"K(+) channel subunit beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-KCNAB1","type":"exact"}],"termid":"PR:O59826"}


id: GO:0031509
data:
  {"annotated_genes":["SJAG_04574","SJAG_03844","SJAG_02409","SJAG_03680","SJAG_03982","SJAG_02401","SJAG_04186","SJAG_00341","SJAG_04039","SJAG_01675","SJAG_00756","SJAG_02778","SJAG_03042","SJAG_03916","SJAG_00934","SJAG_00676","SJAG_03128","SJAG_02621","SJAG_02576","SJAG_03997","SJAG_01601","SJAG_02119","SJAG_01579","SJAG_01540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60713,61542,74367,79295,92221,93284,94089,96093,96360,98743,100264,101142,106111,110200,112539,113328,114168,114270,115353,115732,116050,119766,120170,120901],"is_not":false,"summary":null,"term":"GO:0031509"}]},"cv_name":"biological_process","definition":"The compaction of chromatin into heterochromatin at the subtelomeric region.","definition_xrefs":["GOC:mah","PMID:10219245","PMID:26205977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constitutive heterochromatin formation","termid":"GO:0140719"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00341":null,"SJAG_00676":null,"SJAG_00756":null,"SJAG_00934":null,"SJAG_01540":null,"SJAG_01579":null,"SJAG_01601":null,"SJAG_01675":null,"SJAG_02119":null,"SJAG_02401":null,"SJAG_02409":null,"SJAG_02576":null,"SJAG_02621":null,"SJAG_02778":null,"SJAG_03042":null,"SJAG_03128":null,"SJAG_03680":null,"SJAG_03844":null,"SJAG_03916":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04574":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006325"],"is_obsolete":false,"name":"subtelomeric heterochromatin formation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0035390","GO:0099114","GO:0006348"],"synonyms":[{"name":"Telomere Position Effect","type":"exact"},{"name":"chromatin silencing at subtelomere","type":"related"},{"name":"chromatin silencing at telomere","type":"exact"},{"name":"establishment of chromatin silencing at telomere","type":"related"},{"name":"heterochromatic silencing at subtelomere","type":"related"},{"name":"heterochromatic silencing at telomere","type":"exact"},{"name":"regulation of chromatin silencing at telomere","type":"related"},{"name":"regulation of subtelomeric heterochromatin assembly","type":"related"},{"name":"subtelomere chromatin silencing","type":"related"},{"name":"subtelomeric heterochromatin assembly","type":"exact"},{"name":"subtelomeric silencing","type":"exact"},{"name":"telomere chromatin silencing","type":"exact"},{"name":"telomeric heterochromatin assembly","type":"related"},{"name":"telomeric heterochromatin formation","type":"related"},{"name":"telomeric silencing","type":"exact"}],"termid":"GO:0031509","terms_by_termid":{"GO:0031509":null}}


id: PBO:0088425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADP binding superfamily, implicated in heme catabolism","termid":"PBO:0088425"}


id: PBO:0081870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 812, pseudogene","termid":"PBO:0081870"}


id: MONDO:0015079
data:
  {"annotated_genes":["SJAG_00260","SJAG_03920","SJAG_02398"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87378,87377,87379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011740"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited neuroendocrine tumor (obsolete MONDO:0025511)","termid":"MONDO:0025511"},{"relation_name":"is_a","term_name":"polyendocrinopathy","termid":"MONDO:0015126"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"multiple polyglandular tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:100094","icd11.foundation:1316827435","ICD10WHO:D44.8","UMLS:C5848154","GARD:19766","MEDGEN:1863613"],"termid":"MONDO:0015079","terms_by_termid":{"MONDO:0011740":null},"xrefs":{"Monarch":{"xref_id":"0015079"}}}


id: PATO:0000950
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color between white and black colors.","direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grey","synonyms":[{"name":"plumbeous","type":"related"}],"termid":"PATO:0000950"}


id: PBO:0050954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFNG antisense RNA 1","termid":"PBO:0050954"}


id: PBO:0044555
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 1","termid":"PBO:0044555"}


id: GO:1901717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gamma-aminobutyric acid catabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of amino acid metabolic process","termid":"GO:0045764"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of gamma-aminobutyric acid catabolic process","termid":"GO:1901715"},{"relation_name":"positively_regulates","term_name":"gamma-aminobutyric acid catabolic process","termid":"GO:0009450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"positive regulation of gamma-aminobutyric acid catabolic process","synonyms":[{"name":"activation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"activation of 4-aminobutanoate catabolism","type":"exact"},{"name":"activation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"activation of 4-aminobutyrate catabolism","type":"exact"},{"name":"activation of GABA catabolic process","type":"exact"},{"name":"activation of GABA catabolism","type":"exact"},{"name":"activation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"activation of gamma-aminobutyric acid catabolic process","type":"narrow"},{"name":"activation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"activation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"positive regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"positive regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"positive regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"positive regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"positive regulation of GABA catabolic process","type":"exact"},{"name":"positive regulation of GABA catabolism","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"positive regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"up regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"up regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"up regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"up regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"up regulation of GABA catabolic process","type":"exact"},{"name":"up regulation of GABA catabolism","type":"exact"},{"name":"up regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"up regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"up regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"up regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"up-regulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"up-regulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"up-regulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"up-regulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"up-regulation of GABA catabolic process","type":"exact"},{"name":"up-regulation of GABA catabolism","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"up-regulation of gamma-aminobutyric acid degradation","type":"exact"},{"name":"upregulation of 4-aminobutanoate catabolic process","type":"exact"},{"name":"upregulation of 4-aminobutanoate catabolism","type":"exact"},{"name":"upregulation of 4-aminobutyrate catabolic process","type":"exact"},{"name":"upregulation of 4-aminobutyrate catabolism","type":"exact"},{"name":"upregulation of GABA catabolic process","type":"exact"},{"name":"upregulation of GABA catabolism","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid breakdown","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid catabolic process","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid catabolism","type":"exact"},{"name":"upregulation of gamma-aminobutyric acid degradation","type":"exact"}],"termid":"GO:1901717"}


id: PBO:0083064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydroorotate dehydrogenase; catalyzes the fourth enzymatic step in the de novo biosynthesis of pyrimidines, converting dihydroorotic acid into orotic acid","termid":"PBO:0083064"}


id: MOD:01663
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-(ADP-ribosyl)-L-threonine.","definition_xrefs":["RESID:AA0519","PubMed:20185726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenosine diphosphoribosyl (ADP-ribosyl) modified residue","termid":"MOD:00752"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(ADP-ribosyl)-L-threonine","synonyms":[{"name":"(S)-2-amino-3-([adenosine 5'-(trihydrogen diphosphate) 5'->5'-ester with alpha-D-ribofuranosyl]oxy)-butanoic acid","type":"exact"},{"name":"O-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-(ADP-ribosyl)-L-threonine","type":"exact"},{"name":"O3-[alpha-D-ribofuranoside 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)]-L-threonine","type":"exact"},{"name":"O3-alpha-D-ribofuranosyl-L-threonine 5'->5'-ester with adenosine 5'-(trihydrogen diphosphate)","type":"exact"}],"termid":"MOD:01663"}


id: GO:0003132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from mesodermal cells to endodermal cells that contributes to heart induction.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal-endodermal cell signaling","termid":"GO:0003131"},{"relation_name":"part_of","term_name":"heart induction","termid":"GO:0003129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mesodermal-endodermal cell signaling involved in heart induction","synonyms":[{"name":"mesodermal-endodermal cell signalling involved in heart induction","type":"exact"}],"termid":"GO:0003132"}


id: MONDO:0022495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arthritis short stature deafness (obsolete MONDO:0022495)","termid":"MONDO:0022495","xrefs":{"Monarch":{"xref_id":"0022495"}}}


id: GO:0002356
data:
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id: PBO:0080387
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id: PBO:0040812
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id: PBO:0048852
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id: PBO:0070399
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id: PBO:0075277
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id: GO:0003122
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id: PBO:0055634
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id: GO:0003316
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id: PBO:0047046
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id: MONDO:0971006
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id: GO:1903472
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id: GO:0034314
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id: PBO:0030941
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id: GO:0034195
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id: PBO:0079020
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id: PBO:0073089
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id: MONDO:0005503
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disorder of mental health","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:315.8","SCTID:129104009","DOID:0060037","UMLS:C1263839","MEDGEN:688110"],"synonyms":[{"name":"developmental disorder of mental health","type":"exact"},{"name":"developmental mental 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id: GO:0050226
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenosine 5'-phosphosulfate + galactosylsphingosine = adenosine 3',5'-bisphosphate + psychosine sulfate.","definition_xrefs":["MetaCyc:PSYCHOSINE-SULFOTRANSFERASE-RXN","EC:2.8.2.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016782","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"psychosine sulfotransferase activity","secondary_identifiers":["RHEA:14137"],"synonyms":[{"name":"3'-phosphoadenosine 5'-phosphosulfate-psychosine sulphotransferase activity","type":"related"},{"name":"3'-phosphoadenylyl-sulfate:galactosylsphingosine sulfotransferase activity","type":"related"},{"name":"PAPS:psychosine sulphotransferase activity","type":"related"},{"name":"psychosine sulphotransferase activity","type":"exact"}],"termid":"GO:0050226"}


id: GO:0042368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of vitamin D, any of a group of related, fat-soluble compounds that are derived from delta-5,7 steroids and play a central role in calcium metabolism. Specific forms of vitamin D include calciferol (ergocalciferol; vitamin D2) and cholecalciferol (calciol; vitamin D3).","definition_xrefs":["GOC:mah","ISBN:0471331309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid biosynthetic process","termid":"GO:0006694"},{"relation_name":"is_a","term_name":"vitamin D metabolic process","termid":"GO:0042359"},{"relation_name":"is_a","term_name":"fat-soluble vitamin biosynthetic process","termid":"GO:0042362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"vitamin D biosynthetic process","synonyms":[{"name":"calciferol biosynthesis","type":"narrow"},{"name":"calciferol biosynthetic process","type":"narrow"},{"name":"cholecalciferol biosynthesis","type":"narrow"},{"name":"cholecalciferol biosynthetic process","type":"narrow"},{"name":"ergocalciferol biosynthesis","type":"narrow"},{"name":"ergocalciferol biosynthetic process","type":"narrow"},{"name":"vitamin D anabolism","type":"exact"},{"name":"vitamin D biosynthesis","type":"exact"},{"name":"vitamin D formation","type":"exact"},{"name":"vitamin D synthesis","type":"exact"}],"termid":"GO:0042368"}


id: MOD:00072
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-methylglycine.","definition_xrefs":["PubMed:1593629","RESID:AA0063","DeltaMass:0","ChEBI:15611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at 71.037114 Da","termid":"MOD:00570"},{"relation_name":"is_a","term_name":"methylated glycine","termid":"MOD:00714"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylglycine","synonyms":[{"name":"L-sarcosine","type":"exact"},{"name":"MOD_RES N-methylglycine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"Methylation","type":"related"},{"name":"N-methylated glycine","type":"exact"},{"name":"N-methylglycine","type":"exact"},{"name":"NMe1Gly","type":"exact"},{"name":"Sar","type":"exact"},{"name":"Sarcosine","type":"exact"},{"name":"Sarcosyl","type":"exact"},{"name":"methylaminoacetic acid","type":"exact"},{"name":"methylaminoethanoic acid","type":"exact"}],"termid":"MOD:00072"}


id: PBO:0054594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1997","termid":"PBO:0054594"}


id: MONDO:0056799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the layer of synovial tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovium disorder","secondary_identifiers":["UMLS:C0263945","SCTID:3519007","ICD9:727.89","ICD9:727.9","MEDGEN:538212"],"synonyms":[{"name":"disease of layer of synovial tissue","type":"exact"},{"name":"disease or disorder of layer of synovial tissue","type":"exact"},{"name":"disorder of layer of synovial tissue","type":"exact"},{"name":"disorder of synovium","type":"exact"},{"name":"layer of synovial tissue disease","type":"exact"},{"name":"layer of synovial tissue disease or disorder","type":"exact"}],"termid":"MONDO:0056799","xrefs":{"Monarch":{"xref_id":"0056799"}}}


id: GO:0018643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: carbon disulfide + NADH + H+ + O2 = [S] + H2O + NAD+ + carbonyl sulfide.","definition_xrefs":["UM-BBD_reactionID:r0599"],"gene_count":0,"genotype_count":0,"name":"obsolete carbon disulfide oxygenase activity (obsolete GO:0018643)","synonyms":[{"name":"carbon disulphide oxygenase activity","type":"exact"}],"termid":"GO:0018643"}


id: GO:2000741
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mesenchymal stem cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of stem cell differentiation","termid":"GO:2000738"},{"relation_name":"is_a","term_name":"regulation of mesenchymal stem cell differentiation","termid":"GO:2000739"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal stem cell differentiation","termid":"GO:2000741"}


id: PBO:0011962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"other","termid":"PBO:0011962"}


id: PBO:0031778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_endocytosis_during_vegetative_growth","termid":"PBO:0031778"}


id: FYPO:0003144
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to methyl methanesulfonate is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal protein accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"normal protein level during cellular response to MMS","type":"exact"},{"name":"normal protein level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"normal protein level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"normal protein level during cellular response to methyl methanesulphonate","type":"exact"}],"termid":"FYPO:0003144"}


id: MONDO:0017257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic posterior uveitis is a rare, potentially sight-threatening, ocular disease, not attributed to any specific ocular or systemic cause, characterized by focal, multifocal or diffuse non-infectious inflammation in the posterior uvea (i.e. choroiditis, chorioretinitis, retinitis and neuroretinitis). Visual morbidity due to complications (including cystoid macular edema and choroidal neovascularization) has been reported.","definition_xrefs":["Orphanet:280917"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"choroiditis","termid":"MONDO:0001280"},{"relation_name":"is_a","term_name":"uveitis","termid":"MONDO:0020283"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"idiopathic posterior uveitis","secondary_identifiers":["MEDGEN:1657160","GARD:21099","UMLS:C4751435"],"termid":"MONDO:0017257","xrefs":{"Monarch":{"xref_id":"0017257"}}}


id: GO:0035291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of the intercalary segment of the anterior head, following establishment of segment boundaries. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["ISBN:0878932437","PMID:10477305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of segmental identity, head","termid":"GO:0007380"},{"relation_name":"part_of","term_name":"anterior head segmentation","termid":"GO:0035288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, intercalary segment","termid":"GO:0035291"}


id: PBO:0061321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member A8","termid":"PBO:0061321"}


id: SO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intron located in the untranslated region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_intron","synonyms":[{"name":"UTR intron","type":"exact"}],"termid":"SO:0000446"}


id: PBO:0081988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZSCAN16 antisense RNA 1","termid":"PBO:0081988"}


id: MONDO:0012805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of paroxysmal dyskinesia, characterized by painless attacks of dystonia of the extremities triggered by prolonged physical activities.","definition_xrefs":["Orphanet:98811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GLUT1 deficiency syndrome","termid":"MONDO:0000188"},{"relation_name":"is_a","term_name":"paroxysmal dyskinesia","termid":"MONDO:0015427"},{"relation_name":"is_a","term_name":"disorder of carbohydrate transmembrane transport and absorption","termid":"MONDO:0017706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0005027","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"childhood onset GLUT1 deficiency syndrome 2","secondary_identifiers":["UMLS:C1842534","MESH:C564288","DOID:0090045","NANDO:1200531","GARD:10541","SCTID:724072002","OMIM:612126","MEDGEN:330866"],"synonyms":[{"name":"DYT-SLC2A1","type":"related"},{"name":"DYT18","type":"exact"},{"name":"GLUT1 deficiency syndrome 2","type":"related"},{"name":"GLUT1 deficiency syndrome 2, childhood onset","type":"exact"},{"name":"GLUT1 deficiency syndrome type 2","type":"exact"},{"name":"GLUT1DS2","type":"related"},{"name":"PED","type":"exact"},{"name":"PxMD-SLC2A1","type":"exact"},{"name":"childhood onset GLUT1 deficiency syndrome 2","type":"exact"},{"name":"childhood onset GLUT1 deficiency syndrome type 2","type":"exact"},{"name":"dystonia 18","type":"exact"},{"name":"paroxysmal exercise-induced dyskinesia with or without epilepsy and/or hemolytic Anaemia","type":"related"},{"name":"paroxysmal exercise-induced dyskinesia with or without epilepsy and/or hemolytic Anemia","type":"related"},{"name":"paroxysmal exercise-induced dystonia","type":"exact"},{"name":"paroxysmal exertion-induced dyskinesia","type":"related"},{"name":"paroxysmal exertion-induced dystonia with or without epilepsy and/or hemolytic Anaemia","type":"related"},{"name":"paroxysmal exertion-induced dystonia with or without epilepsy and/or hemolytic Anemia","type":"related"},{"name":"ped","type":"exact"},{"name":"ped with or without epilepsy and/or hemolytic Anaemia","type":"related"},{"name":"ped with or without epilepsy and/or hemolytic Anemia","type":"related"}],"termid":"MONDO:0012805","xrefs":{"Monarch":{"xref_id":"0012805"}}}


id: PBO:0044691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"discoidin domain receptor tyrosine kinase 2","termid":"PBO:0044691"}


id: FYPO:0002537
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abnormal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm","termid":"FYPO:0002529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000138","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","synonyms":[{"name":"abnormal protein localisation to nucleoplasm during cellular response to hydroxyurea","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to HU","type":"exact"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea during vegetative growth","type":"exact"}],"termid":"FYPO:0002537"}


id: PBO:0028282
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_mating-type_region_heterochromatin","termid":"PBO:0028282"}


id: GO:0034815
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-4-(8-hydroxypyren-7-yl)-2-oxobut-3-enoate = 10-oxabenzo(def)chrysen-9-one + formate + H+.","definition_xrefs":["UM-BBD_reactionID:r1135"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-4-(8-hydroxypyren-7-yl)-2-oxobut-3-enoate lyase activity (obsolete GO:0034815)","termid":"GO:0034815"}


id: MONDO:0100533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited disease susceptibility or predisposition to developing intracerebral hemorrhage.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"},{"relation_name":"is_a","term_name":"COL4A1/A2-related disorder","termid":"MONDO:1010150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhage, intracerebral, susceptibility to","secondary_identifiers":["OMIM:614519","MEDGEN:482735","UMLS:C3281105"],"synonyms":[{"name":"ICH","type":"exact"}],"termid":"MONDO:0100533","xrefs":{"Monarch":{"xref_id":"0100533"}}}


id: PBO:0059417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S36 pseudogene 3","termid":"PBO:0059417"}


id: MONDO:0013939
data:
  {"annotated_genes":["SJAG_05950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89235],"is_not":false,"summary":null,"term":"MONDO:0013939"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX26 defect","termid":"MONDO:0100271"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005559","MONDO:0006025","MONDO:0005244","MONDO:0019053"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 7B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C155761","GARD:15867","OMIM:614873","MEDGEN:766865","DOID:0081436","UMLS:C3553951"],"synonyms":[{"name":"PBD7B","type":"related"},{"name":"peroxisome biogenesis disorder 7B","type":"exact"},{"name":"peroxisome biogenesis disorder type 7B","type":"exact"}],"termid":"MONDO:0013939","terms_by_termid":{"MONDO:0013939":null},"xrefs":{"Monarch":{"xref_id":"0013939"}}}


id: MONDO:0000141
data:
  {"annotated_genes":["SJAG_04884","SJAG_00213","SJAG_02795","SJAG_01082","SJAG_03436","SJAG_04699"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859575"},{"annotations":[87591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859576"},{"annotations":[88770,88769],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009759"},{"annotations":[87904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013582"},{"annotations":[87589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859346"}]},"cv_name":"mondo","definition":"Mosaic variegated aneuploidy (MVA) syndrome is a chromosomal anomaly characterized by multiple mosaic aneuploidies that leads to a variety of phenotypic abnormalities and cancer predisposition.","definition_xrefs":["Orphanet:1052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00213":null,"SJAG_01082":null,"SJAG_02795":null,"SJAG_03436":null,"SJAG_04699":null,"SJAG_04884":null},"genotype_count":0,"is_obsolete":false,"name":"mosaic variegated aneuploidy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080688","MESH:C536987","GARD:3007","icd11.foundation:398235351","OMIMPS:257300","MEDGEN:1641418","UMLS:C4551972","ICD9:758.89","SCTID:700056005"],"synonyms":[{"name":"Warburton-Anyane-Yeboa syndrome","type":"exact"}],"termid":"MONDO:0000141","terms_by_termid":{"MONDO:0009759":null,"MONDO:0013582":null,"MONDO:0859346":null,"MONDO:0859575":null,"MONDO:0859576":null},"xrefs":{"Monarch":{"xref_id":"0000141"}}}


id: GO:1901632
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of synaptic vesicle membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"synaptic vesicle membrane organization","termid":"GO:0048499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"regulation of synaptic vesicle membrane organization","synonyms":[{"name":"regulation of SLMV biogenesis","type":"narrow"},{"name":"regulation of synaptic vesicle membrane organisation","type":"exact"},{"name":"regulation of synaptic vesicle membrane organization and biogenesis","type":"related"}],"termid":"GO:1901632"}


id: MONDO:0035584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare ophthalmic disorder characterized by typically bilateral, asymmetric, yellowish, punctate chorioretinal lesions of the posterior pole forming a linear branching pattern and progressing to atrophic scars. Subretinal neovascular membranes occur in many cases. Vitritis is always absent. Patients may present with blurred vision, scotoma, floaters, photopsia, and metamorphopsia. Choroidal neovascular membrane formation and subretinal fibrosis are the major causes of visual loss. The condition predominantly occurs in young myopic females.","definition_xrefs":["Orphanet:580951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"punctate inner choroidopathy","secondary_identifiers":["ICD10CM:H31.0","MEDGEN:152679","UMLS:C0730321","icd11.foundation:1322994548","GARD:7503"],"termid":"MONDO:0035584","xrefs":{"Monarch":{"xref_id":"0035584"}}}


id: PBO:0067101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 143, pseudogene","termid":"PBO:0067101"}


id: PBO:0087454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex with Ctf8p and Ctf18p; shares some components with Replication Factor C; required for sister chromatid cohesion and telomere length maintenance","termid":"PBO:0087454"}


id: MONDO:0017902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic variant of Mendelian susceptibility to mycobacterial diseases characterized by a partial deficiency in IFN-gammaR2, leading to a residual response to IFN-gamma and consequently to recurrent, moderately severe infections with bacillus Calmette-Guerin (BCG) and other environmental mycobacteria (EM).","definition_xrefs":["Orphanet:319574"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immunodeficiency 28","termid":"MONDO:0013953"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autosomal recessive Mendelian susceptibility to mycobacterial diseases due to partial IFNgammaR2 deficiency","secondary_identifiers":["MEDGEN:1387677","UMLS:C4511098"],"synonyms":[{"name":"IFNGR2 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial IFNgammaR2 deficiency","type":"exact"},{"name":"autosomal recessive MSMD due to partial interferon gamma receptor 2 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in IFNGR2","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to partial interferon gamma receptor 2 deficiency","type":"exact"}],"termid":"MONDO:0017902","xrefs":{"Monarch":{"xref_id":"0017902"}}}


id: PBO:0072775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A4, constitutive","termid":"PBO:0072775"}


id: PR:O14423
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A major centromere autoantigen B that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-B homolog protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9E9.10c","secondary_identifiers":["UniProtKB:O14423"],"synonyms":[{"name":"CBHP-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC9E9.10c","type":"related"},{"name":"Spom972h-CENPB","type":"exact"},{"name":"cbh","type":"related"}],"termid":"PR:O14423"}


id: GO:0070864
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular structure that includes cytoskeletal components and part of the cell membrane. Forms at the nuclear end of a male germline syncytium, or cyst, and translocates the over the length of the syncytium in the course of sperm individualization. Each complex contains an array of 64 investment cones, one per nucleus, that move synchronously along the spermatogenic cyst.","definition_xrefs":["GOC:sart","PMID:9550716","PMID:10588662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"sperm individualization complex","termid":"GO:0070864"}


id: PBO:0085823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expression is regulated by phosphate levels; green fluorescent protein (GFP)-fusion protein localizes to the cell periphery and vacuole; protein abundance increases in response to DNA replication stress","termid":"PBO:0085823"}


id: MONDO:0012530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Palmoplantar keratoderma-XX sex reversal-predisposition to squamous cell carcinoma syndrome is characterized by sex reversal in males with a 46, XX (SRY-negative) karyotype, palmoplantar hyperkeratosis and a predisposition to squamous cell carcinoma. To date, five cases (four of whom were brothers) have been described. The etiology is unknown.","definition_xrefs":["Orphanet:85112"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"},{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratoderma-XX sex reversal-predisposition to squamous cell carcinoma syndrome","secondary_identifiers":["GARD:16733","OMIM:610644","MESH:C567165","MEDGEN:461281","UMLS:C3149931"],"synonyms":[{"name":"palmoplantar hyperkeratosis and true hermaphroditism","type":"related"},{"name":"palmoplantar hyperkeratosis with squamous cell carcinoma of skin and 46,XX SEX reversal","type":"related"},{"name":"palmoplantar hyperkeratosis with squamous cell carcinoma of skin and sex reversal","type":"exact"},{"name":"palmoplantar hyperkeratosis-XX sex reversal-predisposition to squamous cell carcinoma syndrome","type":"exact"}],"termid":"MONDO:0012530","xrefs":{"Monarch":{"xref_id":"0012530"}}}


id: PBO:0088143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar serine-type carboxypeptidase; involved, along with functional homolog Prc1p, in vacuolar zymogen activation, breakdown of the autophagic body, and autophagosome-dependent protein synthesis; role in phytochelatin synthesis; localizes to the vacuole lumen; expression induced by nitrogen limitation in a GLN3, GAT1-independent manner; N-glycosylated","termid":"PBO:0088143"}


id: PBO:0075265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 18 pseudogene 18","termid":"PBO:0075265"}


id: GO:1902809
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle fiber differentiation.","definition_xrefs":["GOC:mr","GOC:TermGenie","GO_REF:0000058","PMID:17879321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"regulation of skeletal muscle cell differentiation","termid":"GO:2001014"},{"relation_name":"regulates","term_name":"skeletal muscle fiber differentiation","termid":"GO:0098528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle fiber differentiation","termid":"GO:1902809"}


id: PBO:0120018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein regulatory complex subunit 11 like","termid":"PBO:0120018"}


id: MONDO:0019781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, and subependymal giant cell astrocytoma.","definition_xrefs":["NCIT:C60781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"astrocytic tumor","termid":"MONDO:0021636"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrocytoma (excluding glioblastoma)","secondary_identifiers":["MESH:D001254","EFO:0000272","ICDO:9400/3","MEDGEN:438","ONCOTREE:ASTR","UMLS:C0004114","SCTID:147101000119108"],"synonyms":[{"name":"astrocytoma","type":"exact"}],"termid":"MONDO:0019781","xrefs":{"Monarch":{"xref_id":"0019781"}}}


id: MONDO:0859169
data:
  {"annotated_genes":["SJAG_03454"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88318],"is_not":false,"summary":null,"term":"MONDO:0859169"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03454":null},"genotype_count":0,"is_obsolete":false,"name":"White-Kernohan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619426","UMLS:C5543635","MEDGEN:1785087"],"termid":"MONDO:0859169","terms_by_termid":{"MONDO:0859169":null},"xrefs":{"Monarch":{"xref_id":"0859169"}}}


id: PBO:0068298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 5","termid":"PBO:0068298"}


id: MONDO:0004011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial melanoma (obsolete MONDO:0004011)","termid":"MONDO:0004011","xrefs":{"Monarch":{"xref_id":"0004011"}}}


id: FYPO:0004611
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are longer than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long cytoplasmic microtubules","termid":"FYPO:0000233"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","termid":"FYPO:0003625"},{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0001985","FYPO:0002399","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"long interphase microtubules","synonyms":[{"name":"elongated interphase cytoplasmic microtubules","type":"exact"},{"name":"long cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"long cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"long interphase cytoplasmic microtubules","type":"exact"},{"name":"long interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0004611"}


id: MONDO:0011949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thai symphalangism syndrome","secondary_identifiers":["UMLS:C1842679","MESH:C564303","MEDGEN:374990","OMIM:608028"],"synonyms":[{"name":"Thai symphalangism syndrome","type":"exact"}],"termid":"MONDO:0011949","xrefs":{"Monarch":{"xref_id":"0011949"}}}


id: MONDO:0019956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute inflammatory process affecting the brain parenchyma. Causes include viral infections and less frequently bacterial infections, toxins, and immune-mediated processes.","definition_xrefs":["NCIT:C26760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"encephalomyelitis","termid":"MONDO:0005156"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalitis","secondary_identifiers":["ICD10CM:A85","ICD9:323.9","MESH:D004660","ICD9:323.8","Orphanet:97275","DOID:9588","UMLS:C0014038","ICD9:323.0","MEDGEN:4027","MedDRA:10014581","SCTID:45170000"],"synonyms":[{"name":"brain inflammation","type":"broad"}],"termid":"MONDO:0019956","xrefs":{"Monarch":{"xref_id":"0019956"}}}


id: MONDO:0002876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare malignant mixed epithelial and mesenchymal neoplasm that arises from the cervix and is characterized by the presence of malignant mesenchymal elements and benign epithelial elements.","definition_xrefs":["NCIT:C40229"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cervical carcinosarcoma","termid":"MONDO:0002877"},{"relation_name":"is_a","term_name":"adenosarcoma","termid":"MONDO:0005636"},{"relation_name":"is_a","term_name":"malignant mixed epithelial and mesenchymal tumor of cervix uteri","termid":"MONDO:0016277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical adenosarcoma","secondary_identifiers":["UMLS:C1516426","DOID:4111","GARD:20492","ICD10CM:C53.0","MEDGEN:308948","SCTID:764847000","Orphanet:213792"],"synonyms":[{"name":"adenosarcoma of the cervix uteri","type":"exact"},{"name":"adenosarcoma of uterine cervix","type":"exact"},{"name":"cervical Muellerian adenosarcoma","type":"exact"},{"name":"cervical Mullerian adenosarcoma","type":"exact"},{"name":"cervical Müllerian adenosarcoma","type":"exact"},{"name":"cervical adenosarcoma","type":"exact"},{"name":"uterine cervix adenosarcoma","type":"exact"}],"termid":"MONDO:0002876","xrefs":{"Monarch":{"xref_id":"0002876"}}}


id: GO:0051167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving D-xylulose 5-phosphate, a derivative of the ketopentose xylulose phosphorylated at the 5 carbon; it is an intermediate in the pentose phosphate pathway.","definition_xrefs":["ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate-containing compound metabolic process","termid":"GO:0006796"},{"relation_name":"is_a","term_name":"organophosphate metabolic process","termid":"GO:0019637"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"D-xylulose 5-phosphate metabolic process","synonyms":[{"name":"D-xylulose 5-phosphate metabolism","type":"exact"},{"name":"D-xylulose-5-phosphate metabolic process","type":"exact"},{"name":"D-xylulose-5-phosphate metabolism","type":"exact"},{"name":"xylulose 5-phosphate metabolic process","type":"exact"},{"name":"xylulose 5-phosphate metabolism","type":"exact"},{"name":"xylulose-5-phosphate metabolic process","type":"exact"},{"name":"xylulose-5-phosphate metabolism","type":"exact"}],"termid":"GO:0051167"}


id: GO:0022834
data:
  {"annotated_genes":["SJAG_02322","SJAG_03895"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74988,81776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005227"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a solute by a channel that opens when a specific ligand has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02322":null,"SJAG_03895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ligand-gated channel activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0022834","terms_by_termid":{"GO:0005227":null}}


id: GO:0102848
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:2-digalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-18:2-digalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:2-digalactosyldiacylglycerol desaturase activity (obsolete GO:0102848)","termid":"GO:0102848"}


id: PBO:0045658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled segment polarity protein 2","termid":"PBO:0045658"}


id: PBO:0054216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1596","termid":"PBO:0054216"}


id: FYPO:0003639
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cell wall biogenesis is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished cell wall biogenesis","synonyms":[{"name":"abolished fungal-type cell wall biogenesis","type":"exact"},{"name":"fungal-type cell wall biogenesis abolished","type":"exact"}],"termid":"FYPO:0003639"}


id: PBO:0078735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 7-1","termid":"PBO:0078735"}


id: PBO:0053361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 268-2, pseudogene","termid":"PBO:0053361"}


id: GO:0004442
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: D-myo-inositol 1,3-bisphosphate + H2O = D-myo-inositol 1-monophosphate + phosphate.","definition_xrefs":["EC:3.1.3.65","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol-1,4,-bisphosphate 3-phosphatase (obsolete GO:0004442)","synonyms":[{"name":"inositol-1,4,-bisphosphate 3-phosphatase","type":"exact"}],"termid":"GO:0004442"}


id: PBO:0042440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC42 binding protein kinase gamma","termid":"PBO:0042440"}


id: FYPO:0000791
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of actin cortical patches is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton morphology during vegetative growth","termid":"FYPO:0000350"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch","termid":"FYPO:0003987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actin cortical patch morphology","synonyms":[{"name":"abnormal F-actin patch morphology","type":"exact"},{"name":"abnormal actin cortical patch morphology during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch morphology during vegetative growth","type":"exact"},{"name":"abnormal actin patch morphology","type":"exact"}],"termid":"FYPO:0000791"}


id: MONDO:0001139
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent sexual urges, fantasies, or behaviors involving the act (real, not simulated) of being humiliated, beaten, bound, or otherwise made to suffer.","definition_xrefs":["NCIT:C94356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual disorder","termid":"MONDO:0000595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sexual masochism disorder","secondary_identifiers":["DOID:10849","ICD9:302.83","MESH:D008398","SCTID:51239001","UMLS:C0036908","MEDGEN:20727","ICD10CM:F65.51"],"synonyms":[{"name":"sexual masochism","type":"exact"}],"termid":"MONDO:0001139","xrefs":{"Monarch":{"xref_id":"0001139"}}}


id: SO:0000102
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A match to an EST or cDNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide_match","termid":"SO:0000347"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressed_sequence_match","synonyms":[{"name":"expressed sequence match","type":"exact"}],"termid":"SO:0000102"}


id: GO:0090735
data:
  {"annotated_genes":["SJAG_01708","SJAG_03221","SJAG_02708","SJAG_01410","SJAG_04530","SJAG_02079","SJAG_02267","SJAG_00757"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77060,67196,66364,74262,77731],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[80490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[112352,109697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a DNA repair complex.","definition_xrefs":["PMID:27113759","PMID:27233470","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01708":null,"SJAG_02079":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_03221":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"DNA repair complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090735","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0010772":null}}


id: FYPO:0005543
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of actomyosin contractile ring contraction is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0004803","FYPO:0000631"],"is_obsolete":false,"name":"increased duration of actomyosin contractile ring contraction","synonyms":[{"name":"increased duration of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased duration of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased duration of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"prolonged actomyosin contractile ring contraction","type":"exact"}],"termid":"FYPO:0005543"}


id: PR:000050454
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein rnc1 (Schizosaccharomyces pombe) that has not been phosphorylated at the position equivalent to Thr-50 of the amino acid sequence represented by UniProtKB:O74919. Example: UniProtKB:O74919, Thr-50, PR:000026291.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:31911490"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA-binding protein rnc1 (Schizosaccharomyces pombe)","termid":"PR:000050452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rnc1/UnPhos(T50)","pombase_gene_id":"SPCC757.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: RNA-binding protein rnc1 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rnc1/UnPhos:1","type":"exact"},{"name":"UniProtKB:O74919, Thr-50, PR:000026291","type":"narrow"},{"name":"rnc1/UnPhos(T50)","type":"exact"}],"termid":"PR:000050454"}


id: PBO:0083356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified gene NUM1/YDR150W; null mutation blocks anaerobic growth","termid":"PBO:0083356"}


id: GO:1903069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ER-associated ubiquitin-dependent protein catabolic process.","definition_xrefs":["PMID:17872946","GOC:TermGenie","GOC:rph","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ER-associated ubiquitin-dependent protein catabolic process (obsolete GO:1903069)","termid":"GO:1903069"}


id: PBO:0083873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein required for both the G1/S and G2/M phase transitions; modular substrate specificity factor which associates with core SCF (Cdc53p, Skp1p and Hrt1p/Rbx1p) to form the SCFCdc4 complex; SCFCdc4 acts as a ubiquitin-protein ligase directing ubiquitination of cyclin-dependent kinase (CDK) phosphorylated substrates, such as: Sic1p, Far1p, Cdc6p, Clb6p, and Cln3p","termid":"PBO:0083873"}


id: GO:0102747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + chlorophyllide a(1-) + 2-trans,6-trans,10-trans-geranylgeranyl diphosphate(3-) = geranylgeranyl-chlorophyll a + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete chlorophyllide-a:geranyl-geranyl diphosphate geranyl-geranyl transferase activity (obsolete GO:0102747)","termid":"GO:0102747"}


id: PBO:0057385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548b","termid":"PBO:0057385"}


id: PBO:0061046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA like domain containing 2","termid":"PBO:0061046"}


id: MONDO:0033013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"erythrokeratodermia variabilis","termid":"MONDO:0017851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"erythrokeratodermia variabilis et progressiva 3","secondary_identifiers":["MEDGEN:1380593","DOID:0080249","GARD:18589","UMLS:C4479619","OMIM:617525"],"synonyms":[{"name":"EKVP3","type":"related"},{"name":"erythrokeratodermia variabilis ET progressiva 3","type":"related"}],"termid":"MONDO:0033013","xrefs":{"Monarch":{"xref_id":"0033013"}}}


id: GO:0010449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a root meristem, a population of undifferentiated cells in a plant root which maintains a continuous balance between the production of stem cells and the incorporation of their derivatives into the growth of the root.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meristem growth","termid":"GO:0035266"},{"relation_name":"part_of","term_name":"root development","termid":"GO:0048364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"root meristem growth","termid":"GO:0010449"}


id: GO:0071224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a peptidoglycan stimulus. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptidoglycan","termid":"GO:0032494"},{"relation_name":"is_a","term_name":"cellular response to molecule of bacterial origin","termid":"GO:0071219"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to peptidoglycan","termid":"GO:0071224"}


id: PBO:0067373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 474, pseudogene","termid":"PBO:0067373"}


id: PBO:0017029
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human MARK3","termid":"PBO:0017029"}


id: GO:0035801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the adrenal cortex over time, from its formation to the mature structure. The adrenal cortex is located at the periphery of the adrenal gland and controls glucose and electrolyte metabolism, response to stress and sexual development through the production of different classes of steroid hormones (glucocorticoids, mineralocorticoids and androgens).","definition_xrefs":["PMID:21115154","PMID:12185666","Wikipedia:Adrenal_cortex"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"adrenal gland development","termid":"GO:0030325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adrenal cortex development","synonyms":[{"name":"adrenal gland cortex development","type":"exact"}],"termid":"GO:0035801"}


id: GO:0051709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the killing by an organism of cells in another organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell killing","termid":"GO:0031341"},{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"},{"relation_name":"regulates","term_name":"killing of cells of another organism","termid":"GO:0031640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of killing of cells of another organism","secondary_identifiers":["GO:0044531","GO:0052459","GO:0052433","GO:0052248"],"synonyms":[{"name":"modulation by organism of apoptotic process in other organism involved in symbiotic interaction","type":"narrow"},{"name":"modulation of programmed cell death in other organism","type":"narrow"},{"name":"modulation of programmed cell death in other organism involved in symbiotic interaction","type":"narrow"},{"name":"regulation of killing of cells of other organism","type":"exact"}],"termid":"GO:0051709"}


id: GO:0016342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex of peripheral cytoplasmic proteins (alpha-, beta- and gamma-catenin) that interact with the cytoplasmic region of uvomorulin/E-cadherin to connect it to the actin cytoskeleton.","definition_xrefs":["ISBN:0198599323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"extrinsic component of plasma membrane","termid":"GO:0019897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"catenin complex","termid":"GO:0016342"}


id: FYPO:0007112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process in which depolymerization (i.e. removal of tubulin dimers) of microtubules occurs at a lower rate, or speed, as part of centromere clustering during meiotic prophase I.","definition_xrefs":["PMID:23770679","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization","termid":"FYPO:0007111"},{"relation_name":"is_a","term_name":"decreased microtubule depolymerisation involved in meitotic centromere clustering during meiotic prophase I","termid":"FYPO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","synonyms":[{"name":"decreased microtubule depolymerisation speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule depolymerization speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased microtubule shrinkage speed involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerisation involved in meiotic centromere clustering during meiotic prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic centromere clustering during prophase I","type":"exact"},{"name":"decreased rate of microtubule depolymerization involved in meiotic chromosome clustering during meiotic prophase I","type":"related"},{"name":"decreased rate of microtubule depolymerization involved in meiotic kinetochore retrieval during meiotic prophase I","type":"related"},{"name":"reduced rate of microtubule depolymerization involved in meiotic centromere clustering during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007112"}


id: GO:0039682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process of unidirectional viral DNA replication that takes place on a circular DNA to rapidly produce numerous copies of the viral genome. Involves creating a nick in one strand of the circular DNA molecule at the origin of replication. DNA is then synthesized by DNA polymerase. Using the non-nicked strand as a template, replication proceeds around the circular DNA molecule, displacing the nicked strand as single-stranded DNA.","definition_xrefs":["GOC:bf","Wikipedia:Rolling_circle_replication","GOC:jl","VZ:915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral DNA strand displacement replication","termid":"GO:0039687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"rolling circle viral DNA replication","termid":"GO:0039682"}


id: PBO:0058329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4703","termid":"PBO:0058329"}


id: PBO:0050717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family D (Hsp60) member 1 pseudogene 3","termid":"PBO:0050717"}


id: PBO:0072350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 36","termid":"PBO:0072350"}


id: GO:0036342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a post-anal tail is generated and organized. A post-anal tail is a muscular region of the body that extends posterior to the anus. The post-anal tail may aid locomotion and balance.","definition_xrefs":["GOC:kmv","Wikipedia:Chordate","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anal tail morphogenesis","termid":"GO:0036342"}


id: PATO:0001539
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A compositional quality inhering in an bearer by virtue of the bearer's quantities or relative ratios of amylose of the inhering entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amylose composition","synonyms":[{"name":"amylose compositionality","type":"exact"}],"termid":"PATO:0001539"}


id: GO:0036514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemotaxis process that directs the migration of an axon growth cone of a dopaminergic neuron to a specific target site in response to a combination of attractive and repulsive cues.","definition_xrefs":["GOC:PARL","PMID:23517308","GOC:bf","PMID:21106844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dopaminergic neuron axon guidance","synonyms":[{"name":"DA axon guidance","type":"exact"},{"name":"dopaminergic axon guidance","type":"exact"},{"name":"mdDA axon guidance","type":"exact"}],"termid":"GO:0036514"}


id: PBO:0043027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"charged multivesicular body protein 2B","termid":"PBO:0043027"}


id: GO:0075152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075152)","synonyms":[{"name":"negative regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075152"}


id: PBO:0069684
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 961, pseudogene","termid":"PBO:0069684"}


id: SO:0000774
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transmissible element containing genes involved in metabolism, analogous to the pathogenicity islands of gram negative bacteria.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genomic_island","termid":"SO:0000772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolic_island","synonyms":[{"name":"metabolic island","type":"exact"}],"termid":"SO:0000774"}


id: GO:1903246
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of adrenergic receptor signaling pathway involved in positive regulation of heart rate.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11","PMID:17242280","GO_REF:0000058","GOC:rl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate (obsolete GO:1903246)","synonyms":[{"name":"down regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"down regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"down-regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"down-regulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"down-regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"downregulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"downregulation of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"downregulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"inhibition of adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"inhibition of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"},{"name":"negative regulation of Gs-coupled adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"negative regulation of If activation by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of activation of funny current by beta-adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of adenylate cyclase-activating cardiac adrenergic receptor signaling pathway","type":"related"},{"name":"negative regulation of adrenergic receptor signalling pathway involved in positive regulation of heart rate","type":"exact"},{"name":"negative regulation of beta adrenergic receptor signaling pathway involved in positive regulation of heart rate","type":"narrow"}],"termid":"GO:1903246"}


id: PBO:0028513
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_domain","termid":"PBO:0028513"}


id: PATO:0000210
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000210 excretory function (obsolete PATO:0000210)","termid":"PATO:0000210"}


id: MONDO:0004784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A asthma with a basis in a pathological type I hypersensitivity reaction.","definition_xrefs":["MONDO:patterns/allergic_form_of_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic respiratory disease","termid":"MONDO:0000771"},{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"allergic asthma","secondary_identifiers":["icd11.foundation:1870104478","ICD9:493.0","UMLS:C0155877","SCTID:389145006","MEDGEN:102343","DOID:9415"],"synonyms":[{"name":"allergic form of asthma","type":"exact"},{"name":"atopic asthma","type":"related"},{"name":"extrinsic asthma with acute exacerbation","type":"exact"},{"name":"extrinsic asthma with status asthmaticus","type":"exact"}],"termid":"MONDO:0004784","xrefs":{"Monarch":{"xref_id":"0004784"}}}


id: PBO:0091682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antisense RNA (CUT) Cti6","termid":"PBO:0091682"}


id: GO:0150202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transport across blood-brain barrier.","definition_xrefs":["GOC:aruk","PMID:30280653","PMID:29377008","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"negatively_regulates","term_name":"transport across blood-brain barrier","termid":"GO:0150104"},{"relation_name":"part_of","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of transport across blood-brain barrier","termid":"GO:0150202"}


id: PBO:0082260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Amino acid permease; involved in uptake of cysteine, leucine, isoleucine and valine; BAP3 has a paralog, BAP2, that arose from the whole genome duplication","termid":"PBO:0082260"}


id: GO:0015440
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + peptide(in) = ADP + phosphate + peptide(out). Peptides exported include alpha-hemolysin, cyclolysin, colicin V and siderophores from Gram-negative bacteria, and bacteriocin, subtilin, competence factor and pediocin from Gram-positive bacteria.","definition_xrefs":["EC:7.4.2.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"},{"relation_name":"is_a","term_name":"peptide transmembrane transporter activity","termid":"GO:1904680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ABC-type peptide transporter activity","synonyms":[{"name":"ATP-dependent peptide transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled peptide transmembrane transporter activity","type":"related"},{"name":"peptide ABC transporter","type":"exact"},{"name":"peptide-transporting ATPase activity","type":"related"}],"termid":"GO:0015440"}


id: MONDO:0020162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary ectropion (obsolete MONDO:0020162)","secondary_identifiers":["Orphanet:98571"],"termid":"MONDO:0020162","xrefs":{"Monarch":{"xref_id":"0020162"}}}


id: PR:Q09829
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- puf5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09829"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pumilio domain-containing protein C4G8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.03c","synonyms":[{"name":"Spom972h-puf5","type":"exact"}],"termid":"PR:Q09829"}


id: PBO:0062811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 2","termid":"PBO:0062811"}


id: PBO:0063677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 4 pseudogene 1","termid":"PBO:0063677"}


id: PBO:0068529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 130, pseudogene","termid":"PBO:0068529"}


id: PBO:0048699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosylated lysosomal membrane protein","termid":"PBO:0048699"}


id: PBO:0113096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrosphingosine phosphate lyase; regulates intracellular levels of sphingolipid long-chain base phosphates (LCBPs), degrades phosphorylated long chain bases, prefers C16 dihydrosphingosine-l-phosphate as a substrate; localizes to the ER and to the peroxisome","termid":"PBO:0113096"}


id: GO:0031102
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regrowth of neuronal processes such as axons or dendrites in response to their loss or damage.","definition_xrefs":["GOC:dph","GOC:tb","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regeneration","termid":"GO:0031099"},{"relation_name":"is_a","term_name":"neuron projection development","termid":"GO:0031175"},{"relation_name":"is_a","term_name":"cellular response to stress","termid":"GO:0033554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection regeneration","synonyms":[{"name":"neurite regeneration","type":"narrow"}],"termid":"GO:0031102"}


id: PBO:0031736
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_mitotic_recombination","termid":"PBO:0031736"}


id: PR:O13741
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA-binding protein 34 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01463","PRO:DNx","PANTHER:PTHR24011:SF57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.06c","secondary_identifiers":["UniProtKB:O13741"],"synonyms":[{"name":"Spom972h-RBM34","type":"exact"}],"termid":"PR:O13741"}


id: PBO:0029584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_catabolic_process_during_vegetative_growth","termid":"PBO:0029584"}


id: PBO:0003044
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae thi7","termid":"PBO:0003044"}


id: GO:0044052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released via symbiont membrane budding, the evagination of a membrane resulting in formation of a vesicle.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via substance released by membrane budding (obsolete GO:0044052)","synonyms":[{"name":"interaction with host via substance released by symbiont membrane budding","type":"exact"}],"termid":"GO:0044052"}


id: PBO:0047174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 197 Y-linked member 7","termid":"PBO:0047174"}


id: PBO:0060798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S5 pseudogene 4","termid":"PBO:0060798"}


id: GO:0060071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of non-canonical Wnt signaling pathway in which Wnt binding to its receptor on the surface of a target cell results in the activation small G proteins such as Rho, Rac, and Cdc42 which, in turn activate effectors, including C-Jun N-terminal kinase (JNK) and Rho kinase (Rok). The signaling ends with change in the transcription of target genes and/or reorganisation of the cytoskeleton.","definition_xrefs":["PMID:11532397","PMID:28293032","PMID:25349257","PMID:37804416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-canonical Wnt signaling pathway","termid":"GO:0035567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"Wnt signaling pathway, planar cell polarity pathway","secondary_identifiers":["Reactome:R-HSA-4086400"],"synonyms":[{"name":"PCP pathway","type":"exact"},{"name":"Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"Wnt-JNK signaling pathway","type":"related"},{"name":"Wnt-PCP signaling pathway","type":"related"},{"name":"Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"non-canonical Wnt signaling pathway","type":"related"},{"name":"planar cell polarity pathway","type":"exact"}],"termid":"GO:0060071"}


id: GO:0021762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the substantia nigra over time from its initial formation until its mature state. The substantia nigra is the layer of gray substance that separates the posterior parts of the cerebral peduncles (tegmentum mesencephali) from the anterior parts; it normally includes a posterior compact part with many pigmented cells (pars compacta) and an anterior reticular part whose cells contain little pigment (pars reticularis).","definition_xrefs":["ISBN:0878937420","GOC:cls","GO_REF:0000021","ISBN:0838580343","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substantia nigra development","termid":"GO:0021762"}


id: GO:0034147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 5 signaling pathway.","definition_xrefs":["PMID:17328678","PMID:16551253","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pattern recognition receptor signaling pathway","termid":"GO:0062207"},{"relation_name":"regulates","term_name":"toll-like receptor 5 signaling pathway","termid":"GO:0034146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 5 signaling pathway","synonyms":[{"name":"regulation of TLR5 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 5 signalling pathway","type":"exact"}],"termid":"GO:0034147"}


id: GO:0051187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a cofactor, a substance that is required for the activity of an enzyme or other protein.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor catabolic process (obsolete GO:0051187)","synonyms":[{"name":"cofactor breakdown","type":"exact"},{"name":"cofactor catabolism","type":"exact"},{"name":"cofactor degradation","type":"exact"}],"termid":"GO:0051187"}


id: GO:0042497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide containing a nonprotein moiety consisting of three acyl groups.","definition_xrefs":["PMID:12524386","PMID:12077222","PMID:2757794","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopeptide binding","termid":"GO:0071723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"triacyl lipopeptide binding","synonyms":[{"name":"bacterial triacyl lipopeptide binding","type":"narrow"},{"name":"bacterial triacyl lipoprotein binding","type":"related"},{"name":"triacylated lipopeptide binding","type":"exact"}],"termid":"GO:0042497"}


id: PBO:0039885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP42 pseudogene 2","termid":"PBO:0039885"}


id: PBO:0066187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 10","termid":"PBO:0066187"}


id: GO:0031022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the nucleus along microfilaments within the cell, mediated by motor proteins.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"},{"relation_name":"is_a","term_name":"actin filament-based transport","termid":"GO:0099515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nuclear migration along microfilament","synonyms":[{"name":"nuclear migration, microfilament-mediated","type":"exact"}],"termid":"GO:0031022"}


id: GO:0019837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete herbicide susceptibility/resistance (obsolete GO:0019837)","synonyms":[{"name":"herbicide susceptibility/resistance","type":"exact"}],"termid":"GO:0019837"}


id: PBO:0056519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin basic protein","termid":"PBO:0056519"}


id: MONDO:0018099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Whipple disease (obsolete MONDO:0018099)","termid":"MONDO:0018099","xrefs":{"Monarch":{"xref_id":"0018099"}}}


id: FYPO:0001896
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic mRNA processing bodies (P-bodies) are larger than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"enlarged P-bodies","synonyms":[{"name":"enhanced P-body formation","type":"related"},{"name":"enlarged P bodies","type":"exact"},{"name":"enlarged P-bodies during mitotic cell cycle","type":"related"},{"name":"enlarged P-bodies during vegetative growth","type":"exact"},{"name":"enlarged P-body","type":"exact"},{"name":"enlarged cytoplasmic mRNA processing bodies","type":"exact"}],"termid":"FYPO:0001896"}


id: GO:1990145
data:
  {"annotated_genes":["SJAG_00269","SJAG_06284","SJAG_03262"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76436,97803,114351],"is_not":false,"summary":null,"term":"GO:1990145"}]},"cv_name":"biological_process","definition":"Suppression of the occurrence of translational errors, such as codon-anticodon mis-paring, during the process of translation of a protein using an mRNA template.","definition_xrefs":["ISBN:9781936113460","PMID:21841312","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule biosynthetic process","termid":"GO:0009059"},{"relation_name":"part_of","term_name":"translation","termid":"GO:0006412"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00269":null,"SJAG_03262":null,"SJAG_06284":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"maintenance of translational fidelity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990145","terms_by_termid":{"GO:1990145":null}}


id: PBO:0087852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator; binds specific gene recruitment sequences and is required for DNA zip code-mediated targeting of genes to nuclear periphery; regulates proline utilization genes, constitutively binds PUT1 and PUT2 promoters as a dimer, undergoes conformational change to form active state; binds other promoters only under activating conditions; differentially phosphorylated in presence of different nitrogen sources; has a Zn(2)-Cys(6) binuclear cluster domain","termid":"PBO:0087852"}


id: PBO:0085677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in pre-rRNA processing; associated with U3 snRNP; component of small ribosomal subunit (SSU) processosome; ortholog of the human U3-55k protein","termid":"PBO:0085677"}


id: MONDO:0958188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"C1Q deficiency","termid":"MONDO:0013343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"C1Q deficiency 3","secondary_identifiers":["MEDGEN:1841059","OMIM:620322","UMLS:C5830423"],"termid":"MONDO:0958188","xrefs":{"Monarch":{"xref_id":"0958188"}}}


id: PBO:0074596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 9","termid":"PBO:0074596"}


id: PBO:0027961
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_polymerase_II_core_promoter_proximal_region_sequence-specific_DNA_binding","termid":"PBO:0027961"}


id: GO:0140024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of an endosome towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of an endosome to a microtubule, and ends when the endosome reaches its final destination.","definition_xrefs":["PMID:24803650","PMID:25706234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plus-end-directed vesicle transport along microtubule","termid":"GO:0072383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"plus-end-directed endosome transport along mitotic spindle midzone microtubule","termid":"GO:0140024"}


id: MONDO:0015964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete obsolete rare genetic palpebral, lacrimal system and conjunctival disease (obsolete MONDO:0015964)","secondary_identifiers":["Orphanet:183598"],"termid":"MONDO:0015964","xrefs":{"Monarch":{"xref_id":"0015964"}}}


id: PBO:0083134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; dephosphorylates T1 and S5 in  C-terminal domain (CTD) of RNA polymerase II largest subunit, Rpo21p; autoregulates turnover of its mRNA; has a cysteine-rich motif required for function and conserved in eukaryotes; shuttles between the nucleus and cytoplasm; RTR1 has a paralog, RTR2, that arose from the whole genome duplication","termid":"PBO:0083134"}


id: PATO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality that inheres in a bearer by virtue of the bearer's amount of force per unit area it exerts.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pressure","termid":"PATO:0001025"}


id: GO:0047982
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-homocysteine + H2O = sulfide + NH3 + 2-oxobutanoate.","definition_xrefs":["MetaCyc:HOMOCYSTEINE-DESULFHYDRASE-RXN","EC:4.4.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"homocysteine desulfhydrase activity","secondary_identifiers":["Reactome:R-HSA-1614631","RHEA:14501"],"synonyms":[{"name":"L-homocysteine hydrogen-sulfide-lyase (deaminating)","type":"related"},{"name":"L-homocysteine hydrogen-sulfide-lyase (deaminating; 2-oxobutanoate-forming)","type":"related"},{"name":"homocysteine desulfurase activity","type":"related"}],"termid":"GO:0047982"}


id: MONDO:0018792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Moyamoya syndrome (obsolete MONDO:0018792)","secondary_identifiers":["Orphanet:477771"],"synonyms":[{"name":"rare disorder with a Moyamoya angiopathy","type":"related"}],"termid":"MONDO:0018792","xrefs":{"Monarch":{"xref_id":"0018792"}}}


id: PBO:0084338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinetochore localized protein of unknown function; interacts with Cnn1p (CENP-T); orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-W and fission yeast new1","termid":"PBO:0084338"}


id: PBO:0080533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH complex subunit 4","termid":"PBO:0080533"}


id: GO:0061692
data:
  {"annotated_genes":["SJAG_04823","SJAG_01216","SJAG_02515","SJAG_00141","SJAG_04953","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97210,102020,107075,110875,119435,120372],"is_not":false,"summary":null,"term":"GO:0061692"}]},"cv_name":"biological_process","definition":"Any process that reduces or removes the toxicity of hydrogen peroxide in a cell. These include transport of hydrogen peroxide away from sensitive areas and to compartments or complexes whose purpose is sequestration.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detoxification of hydrogen peroxide","termid":"GO:0061691"},{"relation_name":"is_a","term_name":"cellular oxidant detoxification","termid":"GO:0098869"},{"relation_name":"part_of","term_name":"cellular response to hydrogen peroxide","termid":"GO:0070301"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_04823":null,"SJAG_04953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098754"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular detoxification of hydrogen peroxide","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061692","terms_by_termid":{"GO:0061692":null}}


id: PBO:0062118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily C member 45 (gene/pseudogene)","termid":"PBO:0062118"}


id: GO:0005650
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete importin, alpha-subunit transport factor (obsolete GO:0005650)","synonyms":[{"name":"CAS","type":"related"},{"name":"importin, alpha-subunit transport factor","type":"exact"}],"termid":"GO:0005650"}


id: PBO:0113119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epsin-like protein required for endocytosis and actin patch assembly; K48-, K63-specific Ub chain binding protein that functions as an endocytic adaptor; contains clathrin-binding motif at C-terminus; functionally redundant with Ent1p; ENT2 has a paralog, ENT1, that arose from the whole genome duplication","termid":"PBO:0113119"}


id: SO:0002250
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a propeptide of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propeptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:propeptide","type":"exact"},{"name":"propeptide region of CDS","type":"exact"}],"termid":"SO:0002250"}


id: GO:0050594
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + NADPH + O2 + tabersonine = 16-hydroxytabersonine + H2O + NADP+.","definition_xrefs":["EC:1.14.14.103","RHEA:14133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tabersonine 16-hydroxylase activity","secondary_identifiers":["MetaCyc:1.14.13.73-RXN","KEGG_REACTION:R05855"],"synonyms":[{"name":"tabersonine,NADPH:oxygen oxidoreductase (16-hydroxylating)","type":"related"}],"termid":"GO:0050594"}


id: GO:0016295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetradecanoyl-[ACP] + H2O = tetradecanoate + holo-[ACP] + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete myristoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0016295)","synonyms":[{"name":"myristoyl-ACP hydrolase activity","type":"exact"},{"name":"myristoyl-[acyl-carrier protein] hydrolase activity","type":"exact"},{"name":"tetradecanoyl-ACP hydrolase activity","type":"exact"},{"name":"tetradecanoyl-[acyl-carrier-protein] hydrolase activity","type":"exact"}],"termid":"GO:0016295"}


id: PBO:0030003
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-P-bodies_present_in_increased_numbers","termid":"PBO:0030003"}


id: PBO:0071740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 38","termid":"PBO:0071740"}


id: PBO:0083034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Delta(24)-sterol C-methyltransferase; converts zymosterol to fecosterol in the ergosterol biosynthetic pathway by methylating position C-24; localized to lipid particles, the plasma membrane-associated endoplasmic reticulum, and the mitochondrial outer membrane","termid":"PBO:0083034"}


id: FYPO:0009071
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to itraconazole. Cells stop growing (and may die) at a concentration of itraconazole that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to itraconazole","synonyms":[{"name":"hypersensitive to itraconazole","type":"exact"},{"name":"sensitive to itraconazole during mitotic cell cycle","type":"related"},{"name":"sensitive to itraconazole during vegetative growth","type":"exact"}],"termid":"FYPO:0009071"}


id: MOD:01280
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:11857757","PubMed:12175151","Unimod:118#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EDT-iodo-PEO-biotin","termid":"MOD:00490"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDT-iodo-PEO-biotin - site T","synonyms":[{"name":"EDT-iodo-PEO-biotin","type":"related"},{"name":"EDT-iodoacetyl-PEO-biotin","type":"related"}],"termid":"MOD:01280"}


id: FYPO:0000185
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A DNA recombination phenotype observed in the vegetative growth phase of the life cycle in which gene conversion occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA recombination during vegetative growth","termid":"FYPO:0002340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000293","FYPO:0001985"],"is_obsolete":false,"name":"decreased gene conversion during vegetative growth","synonyms":[{"name":"DNA recombination defects, gene conversion, reduced","type":"exact"},{"name":"decreased gene conversion during mitotic cell cycle","type":"related"},{"name":"reduced gene conversion during vegetative growth","type":"exact"}],"termid":"FYPO:0000185"}


id: PBO:0073003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sodium voltage-gated channel beta subunit 3","termid":"PBO:0073003"}


id: GO:0050161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: oxalate + succinyl-CoA = oxalyl-CoA + succinate.","definition_xrefs":["EC:2.8.3.2","RHEA:23588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-transferase activity","termid":"GO:0008410"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016782"],"is_obsolete":false,"name":"succinyl-CoA:oxalate CoA-transferase","secondary_identifiers":["KEGG_REACTION:R01559","MetaCyc:OXALATE-COA-TRANSFERASE-RXN"],"synonyms":[{"name":"oxalate CoA-transferase activity","type":"related"},{"name":"oxalate coenzyme A-transferase activity","type":"related"},{"name":"succinyl-CoA:oxalate CoA-transferase activity","type":"related"},{"name":"succinyl-beta-ketoacyl-CoA transferase activity","type":"related"}],"termid":"GO:0050161"}


id: GO:0030227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with apolipoprotein E to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete apolipoprotein E receptor activity (obsolete GO:0030227)","synonyms":[{"name":"ApoE receptor","type":"exact"},{"name":"apolipoprotein E receptor activity","type":"exact"}],"termid":"GO:0030227"}


id: GO:0021739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mesencephalic trigeminal nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:curators","GOC:dph","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal sensory nucleus development","termid":"GO:0021730"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesencephalic trigeminal nucleus development","termid":"GO:0021739"}


id: PBO:0039756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APP divergent transcript","termid":"PBO:0039756"}


id: GO:1903258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which sorbose is transported from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:2878925","GO_REF:0000075"],"gene_count":0,"genotype_count":0,"name":"obsolete sorbose import across plasma membrane (obsolete GO:1903258)","synonyms":[{"name":"sorbose import into cell","type":"exact"}],"termid":"GO:1903258"}


id: PBO:0064219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C beta 4","termid":"PBO:0064219"}


id: PBO:0057870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3179-3","termid":"PBO:0057870"}


id: PATO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000084 relative rhythym (obsolete PATO:0000084)","termid":"PATO:0000084"}


id: GO:1905782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phosphatidylserine exposure on apoptotic cell surface.","definition_xrefs":["PMID:17401362","GO_REF:0000058","GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phospholipid translocation","termid":"GO:0061092"},{"relation_name":"is_a","term_name":"regulation of phosphatidylserine exposure on apoptotic cell surface","termid":"GO:1905780"},{"relation_name":"positively_regulates","term_name":"phosphatidylserine exposure on apoptotic cell surface","termid":"GO:0070782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phosphatidylserine exposure on apoptotic cell surface","synonyms":[{"name":"activation of externalization of phosphatidylserine","type":"narrow"},{"name":"activation of phosphatidylserine exposure on apoptotic cell surface","type":"narrow"},{"name":"positive regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"up-regulation of externalization of phosphatidylserine","type":"exact"},{"name":"up-regulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"},{"name":"upregulation of externalization of phosphatidylserine","type":"exact"},{"name":"upregulation of phosphatidylserine exposure on apoptotic cell surface","type":"exact"}],"termid":"GO:1905782"}


id: PBO:0066348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCCD1 and UNC45A antisense RNA 1","termid":"PBO:0066348"}


id: MONDO:0033563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 90","secondary_identifiers":["UMLS:C5436588","OMIM:619007","DOID:0112147","MEDGEN:1733837"],"synonyms":[{"name":"RETINITIS PIGMENTOSA 90","type":"related"},{"name":"RP90","type":"related"}],"termid":"MONDO:0033563","xrefs":{"Monarch":{"xref_id":"0033563"}}}


id: PBO:0024870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar aminopeptidase","termid":"PBO:0024870"}


id: GO:0010831
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of myotube differentiation. Myotube differentiation is the process in which a relatively unspecialized cell acquires specialized features of a myotube cell. Myotubes are multinucleated cells that are formed when proliferating myoblasts exit the cell cycle, differentiate and fuse.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myotube differentiation","termid":"GO:0010830"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle cell differentiation","termid":"GO:0051155"},{"relation_name":"positively_regulates","term_name":"myotube differentiation","termid":"GO:0014902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myotube differentiation","termid":"GO:0010831"}


id: FYPO:0003424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial RNA measured in a cell is greater than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"},{"relation_name":"is_a","term_name":"altered RNA level in mitochondrion","termid":"FYPO:0004958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased mitochondrial RNA level","synonyms":[{"name":"increased RNA level in mitochondrion","type":"exact"},{"name":"increased mitochondrial RNA accumulation","type":"related"},{"name":"increased mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"increased mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"increased mitochondrial transcript level","type":"exact"}],"termid":"FYPO:0003424"}


id: PBO:0062045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 32 pseudogene","termid":"PBO:0062045"}


id: GO:1905771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mesodermal cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:23765923","GOC:BHF","GOC:BHF_miRNA","GO_REF:0000058","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of mesodermal cell differentiation","termid":"GO:1905770"},{"relation_name":"negatively_regulates","term_name":"mesodermal cell differentiation","termid":"GO:0048333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesodermal cell differentiation","synonyms":[{"name":"down regulation of mesoderm cell differentiation","type":"exact"},{"name":"down regulation of mesodermal cell differentiation","type":"exact"},{"name":"down-regulation of mesoderm cell differentiation","type":"exact"},{"name":"down-regulation of mesodermal cell differentiation","type":"exact"},{"name":"downregulation of mesoderm cell differentiation","type":"exact"},{"name":"downregulation of mesodermal cell differentiation","type":"exact"},{"name":"inhibition of mesoderm cell differentiation","type":"narrow"},{"name":"inhibition of mesodermal cell differentiation","type":"narrow"},{"name":"negative regulation of mesoderm cell differentiation","type":"exact"}],"termid":"GO:1905771"}


id: RO:0002213
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Process(P1) postively regulates process(P2) iff: P1 initiates P2, or P1 increases the the frequency of initiation of P2 or the magnitude or rate of output of P2.","direct_ancestors":[{"relation_name":"is_a","term_name":"regulates","termid":"RO:0002211"},{"relation_name":"is_a","term_name":"causally_upstream_of,_positive_effect","termid":"RO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulates","termid":"RO:0002213"}


id: GO:0046546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the primary male sexual characteristics over time, from their formation to the mature structures. The primary male sexual characteristics are the testes, and they develop in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of primary sexual characteristics","termid":"GO:0045137"},{"relation_name":"part_of","term_name":"male sex differentiation","termid":"GO:0046661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of primary male sexual characteristics","termid":"GO:0046546"}


id: GO:1903054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of extracellular matrix organization.","definition_xrefs":["GOC:BHF","PMID:22357537","GOC:TermGenie","GO_REF:0000058","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"negatively_regulates","term_name":"extracellular matrix organization","termid":"GO:0030198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of extracellular matrix organization","synonyms":[{"name":"down regulation of extracellular matrix organisation","type":"exact"},{"name":"down regulation of extracellular matrix organization","type":"exact"},{"name":"down regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"down-regulation of extracellular matrix organisation","type":"exact"},{"name":"down-regulation of extracellular matrix organization","type":"exact"},{"name":"down-regulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"downregulation of extracellular matrix organisation","type":"exact"},{"name":"downregulation of extracellular matrix organization","type":"exact"},{"name":"downregulation of extracellular matrix organization and biogenesis","type":"related"},{"name":"inhibition of extracellular matrix organisation","type":"narrow"},{"name":"inhibition of extracellular matrix organization","type":"narrow"},{"name":"inhibition of extracellular matrix organization and biogenesis","type":"related"},{"name":"negative regulation of extracellular matrix organisation","type":"exact"},{"name":"negative regulation of extracellular matrix organization and biogenesis","type":"related"}],"termid":"GO:1903054"}


id: PBO:0042427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 27 pseudogene 11","termid":"PBO:0042427"}


id: PBO:0079719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBR5 divergent transcript","termid":"PBO:0079719"}


id: GO:1902329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA replication termination that is involved in bacterial-type DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication termination","termid":"GO:1902294"},{"relation_name":"part_of","term_name":"bacterial-type DNA replication","termid":"GO:0044787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"bacterial-type DNA replication termination","synonyms":[{"name":"DNA replication termination involved in bacterial-type DNA replication","type":"exact"}],"termid":"GO:1902329"}


id: MONDO:0015265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung disorder that is mainly associated with chronic allograft dysfunction after lung transplantation and that is characterized by inflammation and fibrosis of bronchiolar walls that reduce the diameter of the bronchioles and result in progressive and irreversible airflow obstruction.","definition_xrefs":["Orphanet:1303"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"},{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiolitis obliterans syndrome","secondary_identifiers":["icd11.foundation:592711730","ICD9:466.19","MEDGEN:665","DOID:2799","NANDO:2100039","NANDO:2200209","GARD:5961","NANDO:1200745","SCTID:40100001","UMLS:C0006272","EFO:0007183","HP:0011946","ICD9:491.8"],"synonyms":[{"name":"BO","type":"related"},{"name":"BOOP","type":"exact"},{"name":"bronchiolitis exudativa","type":"related"},{"name":"bronchiolitis fibrosa obliterans","type":"exact"},{"name":"bronchiolitis obliterans","type":"related"},{"name":"bronchiolitis obliterans with obstructive pulmonary disease","type":"narrow"},{"name":"constrictive bronchiolitis","type":"exact"},{"name":"obliterative bronchiolitis","type":"related"},{"name":"organised pneumonia","type":"exact"},{"name":"organising pneumonia","type":"related"},{"name":"organized pneumonia","type":"exact"},{"name":"organizing pneumonia","type":"related"}],"termid":"MONDO:0015265","xrefs":{"Monarch":{"xref_id":"0015265"}}}


id: PBO:0005216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf element Wtf10","termid":"PBO:0005216"}


id: PR:000050515
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A microtubule protein alp7 (Schizosaccharomyces pombe) that has been phosphorylated at the positions equivalent to Ser-248, Thr-297, Thr-351 and Ser-402 of the amino acid sequence represented by UniProtKB:Q9URY2. Example: UniProtKB:Q9URY2, Ser-248/Ser-402, MOD:00046|Thr-297/Thr-351, MOD:00047.","definition_xrefs":["PMID:23770679","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule protein alp7 (Schizosaccharomyces pombe)","termid":"PR:000050514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alp7/Phos:(S248,T297,T351,S402)","pombase_gene_id":"SPAC890.02c","synonyms":[{"name":"PomBase_original_PRO_term_name: microtubule protein alp7 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-alp7/Phos:1","type":"exact"},{"name":"UniProtKB:Q9URY2, Ser-248/Ser-402, MOD:00046|Thr-297/Thr-351, MOD:00047","type":"narrow"},{"name":"alp7/Phos:(S248,T297,T351,S402)","type":"exact"}],"termid":"PR:000050515"}


id: PBO:0001737
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae YER125W","termid":"PBO:0001737"}


id: GO:0004978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with corticotropin to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocortin receptor activity","termid":"GO:0004977"},{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"corticotropin receptor activity","synonyms":[{"name":"ACTH receptor activity","type":"exact"},{"name":"adrenocorticotropic hormone receptor activity","type":"exact"},{"name":"adrenocorticotropin receptor activity","type":"exact"}],"termid":"GO:0004978"}


id: PBO:0016908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug125","termid":"PBO:0016908"}


id: FYPO:0007346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0002057","FYPO:0000257","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth during cellular response to DNA damage","synonyms":[{"name":"normal cell population growth during cellular response to DNA damage","type":"exact"},{"name":"normal cellular response to DNA damage","type":"related"},{"name":"normal sensitivity to DNA damage","type":"related"},{"name":"normal vegetative cell population growth during cellular response to DNA damage","type":"exact"}],"termid":"FYPO:0007346"}


id: PBO:0040012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat containing 1","termid":"PBO:0040012"}


id: GO:1902407
data:
  {"annotated_genes":["SJAG_00279","SJAG_04887","SJAG_03045","SJAG_03025","SJAG_01787","SJAG_02431","SJAG_00268","SJAG_04597","SJAG_03048","SJAG_00082","SJAG_01943","SJAG_01732","SJAG_03703","SJAG_04703","SJAG_04930","SJAG_00700","SJAG_04982","SJAG_00228","SJAG_01805","SJAG_02831","SJAG_04498","SJAG_02392","SJAG_02700","SJAG_04077","SJAG_00845","SJAG_02838","SJAG_02592","SJAG_01143","SJAG_03596","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76898,94551,113922,97302,114363,121258,60223,70831,120545,100913,68756,99660,104580,112852,77519,59069,74498,78268,99931,90267],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[79366],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[97864,104383,96379,92776,105710,112817],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[96421,92008],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[121355,95821],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"Any assembly of mitotic cytokinetic actomyosin apparatus.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in cytokinesis","termid":"GO:0000912"},{"relation_name":"is_a","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00845":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0044085","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"assembly of actomyosin apparatus involved in mitotic cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:27059155":null,"PMID:32915139":null},"synonyms":[{"name":"actomyosin apparatus assembly involved in cytokinesis involved in mitotic cell cycle","type":"exact"},{"name":"cytokinesis, formation of actomyosin apparatus involved in mitotic cell cycle","type":"exact"},{"name":"formation of actomyosin apparatus involved in cytokinesis involved in mitotic cell cycle","type":"related"}],"termid":"GO:1902407","terms_by_termid":{"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null}}


id: MONDO:1012217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyarthritis, non-human animal","termid":"MONDO:1011952"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyarthritis, dog","secondary_identifiers":["OMIA:000805-9615"],"termid":"MONDO:1012217","xrefs":{"Monarch":{"xref_id":"1012217"}}}


id: PBO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI coat complex subunit beta 1","termid":"PBO:0043629"}


id: PBO:0065983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1G","termid":"PBO:0065983"}


id: MONDO:0007012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of Creutzfeldt-Jakob disease that is most commonly contracted after consuming meat from an animal suffering from bovine spongiform encephalopathy.","definition_xrefs":["NCIT:C128438"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"prion disease","termid":"MONDO:0005429"},{"relation_name":"is_a","term_name":"acquired Creutzfeldt-Jakob disease","termid":"MONDO:0018686"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant Creutzfeldt-Jakob disease","secondary_identifiers":["MESH:D016643","NANDO:1200194","EFO:1001233","ICD10CM:A81.01","NCIT:C26802","ICD9:046.11","SCTID:304603007","MEDGEN:138163","MedDRA:10064199","Orphanet:576370","GARD:9550","UMLS:C0376329","DOID:5435","icd11.foundation:378572696"],"synonyms":[{"name":"vCJD","type":"exact"}],"termid":"MONDO:0007012","xrefs":{"Monarch":{"xref_id":"0007012"}}}


id: MONDO:0003359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyosarcoma characterized by the presence of cellular pleomorphism, malignant cells with large nuclei, and a myxoid stroma.","definition_xrefs":["NCIT:C3701"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"myxoid leiomyosarcoma","secondary_identifiers":["UMLS:C0205816","MEDGEN:104725","ICDO:8896/3","DOID:5268"],"synonyms":[{"name":"myxoid leiomyosarcoma","type":"exact"},{"name":"myxoid leiomyosarcoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003359","xrefs":{"Monarch":{"xref_id":"0003359"}}}


id: GO:0031106
data:
  {"annotated_genes":["SJAG_00663","SJAG_01658","SJAG_00514","SJAG_01143","SJAG_00118","SJAG_02683","SJAG_04375"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72103,99830,103787,119101],"is_not":false,"summary":null,"term":"GO:0031106"},{"annotations":[74339,105937,61337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000921"}]},"cv_name":"biological_process","definition":"Control of the formation, spatial distribution, and breakdown of the septin ring.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton organization","termid":"GO:0032185"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00118":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_01143":null,"SJAG_01658":null,"SJAG_02683":null,"SJAG_04375":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"septin ring organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"septin ring organisation","type":"exact"}],"termid":"GO:0031106","terms_by_termid":{"GO:0000921":null,"GO:0031106":null}}


id: GO:0036215
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stem cell factor (SCF) stimulus.","definition_xrefs":["GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to stem cell factor","synonyms":[{"name":"response to KIT ligand","type":"exact"},{"name":"response to SCF","type":"exact"},{"name":"response to hematopoietic growth factor KL","type":"exact"},{"name":"response to stem cell factor stimulus","type":"exact"}],"termid":"GO:0036215"}


id: PR:Q09685
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dre4 gene.","definition_xrefs":["UniProtKB:Q09685","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor dre4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13C5.02","synonyms":[{"name":"DNA replication protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dre4","type":"exact"},{"name":"hyphal growth protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09685"}


id: MONDO:0013409
data:
  {"annotated_genes":["SJAG_04114"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89357],"is_not":false,"summary":null,"term":"MONDO:0013409"}]},"cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing age related macular degeneration in which the cause of the disease is a mutation in the ERCC6 gene.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"age-related macular degeneration","termid":"MONDO:0005150"},{"relation_name":"is_a","term_name":"age related macular degeneration, susceptibility to","termid":"MONDO:0100174"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04114":null},"genotype_count":0,"is_obsolete":false,"name":"age related macular degeneration 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613761","DOID:0110028","MEDGEN:462413","UMLS:C3151063"],"synonyms":[{"name":"ARMD5","type":"exact"},{"name":"ERCC6 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 5","type":"exact"},{"name":"age-related macular degeneration caused by mutation in ERCC6","type":"exact"},{"name":"macular Degeneration, age-related, type 5","type":"exact"},{"name":"macular degeneration, age-related, 5","type":"related"},{"name":"macular degeneration, age-related, susceptibility to, 5","type":"exact"}],"termid":"MONDO:0013409","terms_by_termid":{"MONDO:0013409":null},"xrefs":{"Monarch":{"xref_id":"0013409"}}}


id: FYPO:0005194
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is decreased during S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein degradation during vegetative growth","termid":"FYPO:0000846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein degradation during mitotic S phase","synonyms":[{"name":"decreased protein breakdown during mitotic S phase","type":"exact"},{"name":"decreased protein catabolic process during mitotic S phase","type":"exact"},{"name":"decreased protein catabolism during mitotic S phase","type":"exact"},{"name":"decreased protein degradation during S phase during mitotic cell cycle","type":"related"},{"name":"decreased protein degradation during mitotic S phase during vegetative growth","type":"exact"},{"name":"reduced protein degradation during mitotic S phase","type":"exact"}],"termid":"FYPO:0005194"}


id: FYPO:0000730
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the spindle is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0002399","FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0005447"],"is_obsolete":false,"name":"long spindle","synonyms":[{"name":"elongated spindle","type":"exact"},{"name":"increased spindle length","type":"exact"},{"name":"long spindles","type":"exact"}],"termid":"FYPO:0000730"}


id: PBO:0069669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 946, pseudogene","termid":"PBO:0069669"}


id: PBO:0114868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex assembly factor/arginine methyltransferase, human NDUFAF7 ortholog","termid":"PBO:0114868"}


id: PBO:0031861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_component_organization","termid":"PBO:0031861"}


id: PBO:0038794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 1A (pseudogene)","termid":"PBO:0038794"}


id: MONDO:0003954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiokeratoma that is located on the scrotum or vulva.","direct_ancestors":[{"relation_name":"is_a","term_name":"angiokeratoma","termid":"MONDO:0003143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angiokeratoma of Fordyce","secondary_identifiers":["UMLS:C0263639","SCTID:6331000","icd11.foundation:410953318","MEDGEN:75529","DOID:664"],"synonyms":[{"name":"Fordyce angiokeratoma","type":"exact"},{"name":"Fordyce's spot","type":"exact"},{"name":"Fordyce-type angiokeratoma of scrotum","type":"narrow"}],"termid":"MONDO:0003954","xrefs":{"Monarch":{"xref_id":"0003954"}}}


id: PBO:0054035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1366","termid":"PBO:0054035"}


id: GO:1901092
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein tetramerization.","definition_xrefs":["GOC:TermGenie","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein oligomerization","termid":"GO:0032461"},{"relation_name":"is_a","term_name":"regulation of protein tetramerization","termid":"GO:1901090"},{"relation_name":"positively_regulates","term_name":"protein tetramerization","termid":"GO:0051262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"positive regulation of protein tetramerization","synonyms":[{"name":"activation of protein tetramer assembly","type":"narrow"},{"name":"activation of protein tetramer biosynthesis","type":"narrow"},{"name":"activation of protein tetramer biosynthetic process","type":"narrow"},{"name":"activation of protein tetramer formation","type":"narrow"},{"name":"activation of protein tetramerization","type":"narrow"},{"name":"positive regulation of protein tetramer assembly","type":"exact"},{"name":"positive regulation of protein tetramer biosynthesis","type":"exact"},{"name":"positive regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"positive regulation of protein tetramer formation","type":"exact"},{"name":"up regulation of protein tetramer assembly","type":"exact"},{"name":"up regulation of protein tetramer biosynthesis","type":"exact"},{"name":"up regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"up regulation of protein tetramer formation","type":"exact"},{"name":"up regulation of protein tetramerization","type":"exact"},{"name":"up-regulation of protein tetramer assembly","type":"exact"},{"name":"up-regulation of protein tetramer biosynthesis","type":"exact"},{"name":"up-regulation of protein tetramer biosynthetic process","type":"exact"},{"name":"up-regulation of protein tetramer formation","type":"exact"},{"name":"up-regulation of protein tetramerization","type":"exact"},{"name":"upregulation of protein tetramer assembly","type":"exact"},{"name":"upregulation of protein tetramer biosynthesis","type":"exact"},{"name":"upregulation of protein tetramer biosynthetic process","type":"exact"},{"name":"upregulation of protein tetramer formation","type":"exact"},{"name":"upregulation of protein tetramerization","type":"exact"}],"termid":"GO:1901092"}


id: GO:0003920
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: IMP + NADP+ + NH4 = GMP + 2 H+ + NADPH.","definition_xrefs":["EC:1.7.1.7","RHEA:17185"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"GMP reductase activity","secondary_identifiers":["KEGG_REACTION:R01134","Reactome:R-HSA-514604","MetaCyc:GMP-REDUCT-RXN"],"synonyms":[{"name":"NADPH2:guanosine-5'-phosphate oxidoreductase (deaminating)","type":"related"},{"name":"NADPH:GMP oxidoreductase (deaminating) activity","type":"related"},{"name":"NADPH:guanosine-5'-phosphate oxidoreductase (deaminating) activity","type":"related"},{"name":"guanosine 5'-monophosphate oxidoreductase activity","type":"related"},{"name":"guanosine 5'-monophosphate reductase activity","type":"related"},{"name":"guanosine 5'-phosphate reductase activity","type":"related"},{"name":"guanosine monophosphate reductase activity","type":"related"},{"name":"guanylate reductase activity","type":"related"},{"name":"inosine-5'-phosphate:NADP+ oxidoreductase (aminating)","type":"related"}],"termid":"GO:0003920"}


id: PBO:0039499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 22","termid":"PBO:0039499"}


id: MONDO:1012876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease that occurs in rhesus monkeys due to a mutation in the PINK1 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parkinson disease, non-human animal","termid":"MONDO:1012984"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease, PINK1-related, rhesus monkey","secondary_identifiers":["OMIA:002361-9544"],"termid":"MONDO:1012876","xrefs":{"Monarch":{"xref_id":"1012876"}}}


id: PBO:0048261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose mutarotase","termid":"PBO:0048261"}


id: MONDO:0002611
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete benign epilepsy with centrotemporal spikes (obsolete MONDO:0002611)","termid":"MONDO:0002611","xrefs":{"Monarch":{"xref_id":"0002611"}}}


id: PBO:0031163
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glycine_import","termid":"PBO:0031163"}


id: GO:0097321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell switches from growing as a filament (elongated cells attached end-to-end) to growing as a round budding cell. An example of this is observed in Candida albicans.","definition_xrefs":["GOC:di","PMID:14617167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell growth mode switching, filamentous to budding","termid":"GO:0097321"}


id: FYPO:0004060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which endocytosis does not occur during meiotic interphase II, i.e. the phase between the end of meiosis I cytokinesis the beginning of meiosis II prophase. A phenotype may affect endocytosis of all cargoes, or of specific cargo such as a particular protein.","definition_xrefs":["GO:0044844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal endocytosis","termid":"FYPO:0003886"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished endocytosis during meiotic interphase II","synonyms":[{"name":"abolished actin-mediated endocytosis during meiotic interphase II","type":"exact"},{"name":"abolished protein internalization during meiotic interphase II","type":"narrow"},{"name":"absent endocytosis during meiotic interphase II","type":"exact"},{"name":"endocytosis abolished during meiotic interphase II","type":"exact"}],"termid":"FYPO:0004060"}


id: MONDO:0018793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"temporomandibular joint disorder","termid":"MONDO:0005473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary condylar hyperplasia","secondary_identifiers":["Orphanet:477781","UMLS:C5568570","GARD:21966","MEDGEN:1799993"],"synonyms":[{"name":"type 1 condylar hyperplasia","type":"exact"}],"termid":"MONDO:0018793","xrefs":{"Monarch":{"xref_id":"0018793"}}}


id: PBO:0088000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Twin Cx(9)C protein involved in cytochrome c oxidase organization; organization includes assembly or stability; localizes to the mitochondrial intermembrane space via the Mia40p-Erv1p system; interacts genetically with CYC1 and with cytochrome c oxidase assembly factors","termid":"PBO:0088000"}


id: GO:0016128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving phytosteroids, steroids of higher plants that differ from animal steroids in having substitutions at C24 and/or a double bond at C22. Phytosteroids are so named because they occur in higher plants; some, notably ergosterol, are also found in fungi.","definition_xrefs":["GOC:mah","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete phytosteroid metabolic process (obsolete GO:0016128)","synonyms":[{"name":"phytosteroid metabolism","type":"exact"}],"termid":"GO:0016128"}


id: GO:0051186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving a cofactor, a substance that is required for the activity of an enzyme or other protein. Cofactors may be inorganic, such as the metal atoms zinc, iron, and copper in certain forms, or organic, in which case they are referred to as coenzymes. Cofactors may either be bound tightly to active sites or bind loosely with the substrate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cofactor metabolic process (obsolete GO:0051186)","synonyms":[{"name":"cofactor metabolism","type":"exact"}],"termid":"GO:0051186"}


id: GO:0102942
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3,5-dimethoxyphenol + S-adenosyl-L-methionine = H+ + 1,3,5-trimethoxybenzene + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 3,5-dimethoxyphenol O-methyltransferase activity (obsolete GO:0102942)","termid":"GO:0102942"}


id: MONDO:0003497
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the renal pelvis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"renal pelvis carcinoma","termid":"MONDO:0005519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"renal pelvis squamous cell carcinoma","secondary_identifiers":["NCIT:C7732","MEDGEN:66769","UMLS:C0238409","DOID:5534"],"synonyms":[{"name":"epidermoid carcinoma of kidney pelvis","type":"exact"},{"name":"epidermoid carcinoma of renal pelvis","type":"exact"},{"name":"epidermoid carcinoma of the kidney pelvis","type":"exact"},{"name":"epidermoid carcinoma of the renal pelvis","type":"exact"},{"name":"kidney pelvis epidermoid carcinoma","type":"exact"},{"name":"kidney pelvis squamous cell carcinoma","type":"exact"},{"name":"kidney renal pelvis squamous cell cancer","type":"exact"},{"name":"renal pelvis epidermoid carcinoma","type":"exact"},{"name":"renal pelvis squamous cell cancer","type":"exact"},{"name":"renal pelvis squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of kidney pelvis","type":"exact"},{"name":"squamous cell carcinoma of renal pelvis","type":"exact"},{"name":"squamous cell carcinoma of the kidney pelvis","type":"exact"},{"name":"squamous cell carcinoma of the renal pelvis","type":"exact"}],"termid":"MONDO:0003497","xrefs":{"Monarch":{"xref_id":"0003497"}}}


id: MONDO:1011327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammatory disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inflammatory disease, non-human animal","termid":"MONDO:1011327","xrefs":{"Monarch":{"xref_id":"1011327"}}}


id: GO:0099117
data:
  {"annotated_genes":["SJAG_00851"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105762],"is_not":false,"summary":null,"term":"GO:0099117"}]},"cv_name":"biological_process","definition":"The movement of a protein along a microtubule to the cell-tip, mediated by motor proteins.","definition_xrefs":["PMID:15177031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport along microtubule","termid":"GO:0098840"},{"relation_name":"is_a","term_name":"protein localization to cell tip","termid":"GO:1990151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"protein transport along microtubule to cell tip","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0099117","terms_by_termid":{"GO:0099117":null}}


id: GO:0001195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Suppression of the occurrence of transcriptional errors, such as substitutions and/or insertions of nucleotides that do not correctly match the template base, during the process of transcription elongation from a RNA polymerase III promoter.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of transcriptional fidelity during transcription elongation","termid":"GO:0001192"},{"relation_name":"part_of","term_name":"transcription elongation by RNA polymerase III","termid":"GO:0006385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"maintenance of transcriptional fidelity during transcription elongation by RNA polymerase III","synonyms":[{"name":"maintenance of transcriptional fidelity during DNA-dependent transcription elongation from RNA polymerase III promoter","type":"exact"},{"name":"maintenance of transcriptional fidelity during DNA-templated transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0001195"}


id: MONDO:0000503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A localized non-invasive adenocarcinoma of the lung measuring 3 cm or less. It is characterized by a pure lepidic growth pattern and the lack of stromal, vascular, or pleural invasion.","definition_xrefs":["NCIT:C136486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma in situ","termid":"MONDO:0003218"},{"relation_name":"is_a","term_name":"lung carcinoma in situ","termid":"MONDO:0004660"},{"relation_name":"is_a","term_name":"lung adenocarcinoma","termid":"MONDO:0005061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung adenocarcinoma in situ","secondary_identifiers":["ONCOTREE:LAIS","UMLS:C4521520","NCIT:C8748","MEDGEN:1620128","DOID:0050870"],"synonyms":[{"name":"adenosquamous cell carcinoma in situ of lung","type":"related"},{"name":"adenosquamous cell carcinoma in situ of the lung","type":"related"},{"name":"bronchioalveolar carcinoma","type":"related"},{"name":"bronchioloalveolar carcinoma","type":"narrow"},{"name":"in situ pulmonary adenocarcinoma","type":"related"},{"name":"lung adenocarcinoma In situ","type":"exact"},{"name":"lung adenosquamous cell carcinoma in situ","type":"related"},{"name":"stage 0 adenosquamous cell carcinoma of lung","type":"related"},{"name":"stage 0 adenosquamous cell carcinoma of the lung","type":"related"},{"name":"stage 0 adenosquamous cell lung carcinoma","type":"related"},{"name":"stage 0 adenosquamous lung cancer","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v6","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v6 and v7","type":"related"},{"name":"stage 0 adenosquamous lung carcinoma aJCC v7","type":"related"}],"termid":"MONDO:0000503","xrefs":{"Monarch":{"xref_id":"0000503"}}}


id: PBO:0089439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII adaptor Erv29","termid":"PBO:0089439"}


id: MONDO:0800356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short rib dysplasia","termid":"MONDO:0019691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short-rib thoracic dysplasia 7/20 with polydactyly, digenic","secondary_identifiers":["MEDGEN:1662086","UMLS:C4747658"],"synonyms":[{"name":"SRTD7/20","type":"exact"}],"termid":"MONDO:0800356","xrefs":{"Monarch":{"xref_id":"0800356"}}}


id: MONDO:0005640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by a silent and inert state without voluntary motor activity despite preserved sensorimotor pathways and vigilance. Bilateral frontal lobe dysfunction involving the anterior cingulate gyrus and related brain injuries are associated with this condition. This may result in impaired abilities to communicate and initiate motor activities. (From Adams et al., Principles of Neurology, 6th ed, p348; Fortschr Neurol Psychiatr 1995 Feb;63(2):59-67)","definition_xrefs":["MESH:D000405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"akinetic mutism","secondary_identifiers":["MEDGEN:7942","icd11.foundation:1448580674","EFO:0007138","UMLS:C0001889","DOID:4267","SCTID:53333005"],"synonyms":[{"name":"Coma vigilans","type":"exact"},{"name":"Coma vigilans (finding)","type":"exact"}],"termid":"MONDO:0005640","xrefs":{"Monarch":{"xref_id":"0005640"}}}


id: PBO:0035867
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_intracellular_protein_transport_during_vegetative_growth","termid":"PBO:0035867"}


id: PBO:0017453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-interacts_with_via_parasite-host_interaction","termid":"PBO:0017453"}


id: PBO:0043835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleavage and polyadenylation specific factor 7","termid":"PBO:0043835"}


id: GO:0034807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4,5-dihydroxybenzo(a)pyrene + C1 unit = hydroxymethoxybenzo(a)pyrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4,5-dihydroxybenzo(a)pyrene methyltransferase activity (obsolete GO:0034807)","termid":"GO:0034807"}


id: PBO:0065046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B","termid":"PBO:0065046"}


id: MONDO:0006947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"High blood pressure secondary to renal artery stenosis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypertension","termid":"MONDO:0001105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renovascular hypertension","secondary_identifiers":["MEDGEN:43786","DOID:1591","NANDO:2200141","SCTID:123799005","NANDO:2100016","ICD9:405.91","UMLS:C0020545","EFO:1001153","HP:0100817","ICD10CM:I15.0"],"synonyms":[{"name":"renovascular hypertension","type":"exact"},{"name":"renovascular hypertension (disease)","type":"exact"}],"termid":"MONDO:0006947","xrefs":{"Monarch":{"xref_id":"0006947"}}}


id: PBO:0004763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase I complex subunit Rpa43","termid":"PBO:0004763"}


id: GO:0005077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to MAP kinase and anchors it to a particular subcellular location.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP-kinase anchoring activity (obsolete GO:0005077)","synonyms":[{"name":"MAP-kinase anchor protein activity","type":"exact"},{"name":"MAP-kinase anchoring activity","type":"exact"}],"termid":"GO:0005077"}


id: PBO:0060429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleic acid binding protein 2","termid":"PBO:0060429"}


id: GO:0010839
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of keratinocyte proliferation. Keratinocyte proliferation is the multiplication or reproduction of keratinocytes, resulting in the expansion of a cell population.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of keratinocyte proliferation","termid":"GO:0010837"},{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"negatively_regulates","term_name":"keratinocyte proliferation","termid":"GO:0043616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of keratinocyte proliferation","termid":"GO:0010839"}


id: PATO:0000788
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000788 reproductive function value (obsolete PATO:0000788)","termid":"PATO:0000788"}


id: PBO:0004635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal docking protein Pex14","termid":"PBO:0004635"}


id: MONDO:0023227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of diabetes insipidus that manifests during pregnancy (or in some cases, after pregnancy). It is characterized by theappearance of a polyuric-polydipsic syndrome that resultsin fluid intake ranging from 3 to 20 L/day. It is also charac-terized by excretion of abnormally high volumes of dilutedurine. This polyuria is insipid, i.e., the urine concentrationof dissolved substances is very low.","definition_xrefs":["PMID:20500966"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diabetes insipidus","termid":"MONDO:0004782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"gestational diabetes insipidus","secondary_identifiers":["MESH:C548014","UMLS:C2932666","DOID:0081057","MEDGEN:444359"],"synonyms":[{"name":"Gestagenic diabetes insipidus","type":"related"},{"name":"diabetes insipidus gestational","type":"related"}],"termid":"MONDO:0023227","xrefs":{"Monarch":{"xref_id":"0023227"}}}


id: MONDO:0019891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"monosomy","termid":"MONDO:0020639"},{"relation_name":"is_a","term_name":"chromosome 22 disorder","termid":"MONDO:0700026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"monosomy 22","secondary_identifiers":["Orphanet:96123","GARD:19324","MEDGEN:208644","NCIT:C36461","UMLS:C0795878"],"synonyms":[{"name":"Del(22)","type":"exact"},{"name":"deletion 22","type":"exact"},{"name":"monosomy type 22","type":"exact"}],"termid":"MONDO:0019891","xrefs":{"Monarch":{"xref_id":"0019891"}}}


id: PBO:0018177
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human B'd","termid":"PBO:0018177"}


id: PBO:0089544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WD repeat protein Swd3","termid":"PBO:0089544"}


id: PBO:0065542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphotriesterase related","termid":"PBO:0065542"}


id: GO:0042869
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which aldarate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"aldarate transmembrane transport","synonyms":[{"name":"aldarate transport","type":"related"}],"termid":"GO:0042869"}


id: MONDO:0034189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cholangitis","termid":"MONDO:0004789"},{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"primary biliary cholangitis/primary sclerosing cholangitis and autoimmune hepatitis overlap syndrome","secondary_identifiers":["Orphanet:562639","GARD:22250","MEDGEN:1812237","UMLS:C5680117"],"termid":"MONDO:0034189","xrefs":{"Monarch":{"xref_id":"0034189"}}}


id: PBO:0044000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase lysine methyltransferase","termid":"PBO:0044000"}


id: FYPO:0006825
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle pole body does not occur during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to mitotic spindle pole body","termid":"FYPO:0000941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to mitotic spindle pole body during mitosis","synonyms":[{"name":"abolished protein localisation to mitotic spindle pole body during mitosis","type":"exact"},{"name":"abolished protein localization to mitotic SPB during mitosis","type":"exact"},{"name":"abolished protein localization to mitotic spindle pole body during mitotic M phase","type":"related"},{"name":"abolished protein localization to mitotic spindle pole body during mitotic M-phase","type":"related"},{"name":"abolished protein localization to mitotic spindle pole body during mitotic nuclear division","type":"exact"},{"name":"protein absent from mitotic spindle pole body during mitosis","type":"related"},{"name":"protein localisation to mitotic spindle pole body abolished during mitosis","type":"exact"},{"name":"protein localization to mitotic spindle pole body abolished during mitosis","type":"exact"},{"name":"protein localization to spindle pole body abolished during mitosis during vegetative growth","type":"exact"}],"termid":"FYPO:0006825"}


id: GO:0140767
data:
  {"annotated_genes":["SJAG_03218","SJAG_02822","SJAG_02753","SJAG_00192","SJAG_02162","SJAG_00651","SJAG_01392","SJAG_04035","SJAG_00262","SJAG_02651","SJAG_03535","SJAG_00656","SJAG_00117","SJAG_01617","SJAG_01022","SJAG_03651","SJAG_01068","SJAG_00354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103121,103779,120602],"is_not":false,"summary":null,"term":"GO:0140767"},{"annotations":[101648,106902,111131,97555,117858,103495,117713,106616,61493,113088,99786,109241,109260,118914,118813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990756"}]},"cv_name":"molecular_function","definition":"An adaptor that brings together an enzyme and its substrate. Adaptors recruit the substrate to its enzyme, thus contributing to substrate selection and specificity.","definition_xrefs":["PMID:16250895","PMID:34358446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_00192":null,"SJAG_00262":null,"SJAG_00354":null,"SJAG_00651":null,"SJAG_00656":null,"SJAG_01022":null,"SJAG_01068":null,"SJAG_01392":null,"SJAG_01617":null,"SJAG_02162":null,"SJAG_02651":null,"SJAG_02753":null,"SJAG_02822":null,"SJAG_03218":null,"SJAG_03535":null,"SJAG_03651":null,"SJAG_04035":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"enzyme-substrate adaptor activity","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-202137"],"synonyms":[{"name":"protein substrate chaperone activity","type":"related"},{"name":"protein-substrate adaptor activity","type":"broad"}],"termid":"GO:0140767","terms_by_termid":{"GO:0140767":null,"GO:1990756":null}}


id: PBO:0027032
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_nuclear_envelope","termid":"PBO:0027032"}


id: PBO:0018220
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression","termid":"PBO:0018220"}


id: GO:0047413
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-benzyloxycarbonyl-L-leucine + H2O + H+ = L-leucine + benzyl alcohol + CO2.","definition_xrefs":["EC:3.5.1.64","RHEA:18901"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N(alpha)-benzyloxycarbonylleucine hydrolase activity","secondary_identifiers":["KEGG_REACTION:R02552","MetaCyc:3.5.1.64-RXN"],"synonyms":[{"name":"alpha-N-benzyloxycarbonyl-L-leucine urethanehydrolase activity","type":"related"},{"name":"benzyloxycarbonylleucine hydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonyl amino acid urethane hydrolase IV","type":"related"},{"name":"nalpha-benzyloxycarbonyl-L-leucine urethanehydrolase activity","type":"related"},{"name":"nalpha-benzyloxycarbonylleucine hydrolase activity","type":"related"}],"termid":"GO:0047413"}


id: GO:0051491
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of a filopodium, a thin, stiff protrusion extended by the leading edge of a motile cell such as a crawling fibroblast or amoeba, or an axonal growth cone.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filopodium assembly","termid":"GO:0051489"},{"relation_name":"is_a","term_name":"positive regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120034"},{"relation_name":"positively_regulates","term_name":"filopodium assembly","termid":"GO:0046847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"positive regulation of filopodium assembly","synonyms":[{"name":"activation of filopodium formation","type":"narrow"},{"name":"positive regulation of filopodia biosynthesis","type":"exact"},{"name":"positive regulation of filopodia formation","type":"exact"},{"name":"positive regulation of filopodium formation","type":"exact"},{"name":"stimulation of filopodium formation","type":"narrow"},{"name":"up regulation of filopodium formation","type":"exact"},{"name":"up-regulation of filopodium formation","type":"exact"},{"name":"upregulation of filopodium formation","type":"exact"}],"termid":"GO:0051491"}


id: PBO:0083679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endosomal protein that forms a complex with Hse1p; required for recycling Golgi proteins, forming lumenal membranes and sorting ubiquitinated proteins destined for degradation; has Ubiquitin Interaction Motifs which bind ubiquitin (Ubi4p)","termid":"PBO:0083679"}


id: SO:0000447
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron located in the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_intron","termid":"SO:0000446"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_UTR_intron","synonyms":[{"name":"five prime UTR intron","type":"exact"}],"termid":"SO:0000447"}


id: PBO:0047608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"four and a half LIM domains 3","termid":"PBO:0047608"}


id: PBO:0038332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-connecting_branch_of","termid":"PBO:0038332"}


id: MONDO:0015344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic acute transverse myelitis (ATM) is an immune-mediated inflammatory demyelinating disorder of the spinal cord with motor, sensory and autonomic involvement.","definition_xrefs":["Orphanet:139423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute transverse myelitis","termid":"MONDO:0015342"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic acute transverse myelitis","secondary_identifiers":["GARD:19914"],"synonyms":[{"name":"ATM/TM","type":"exact"}],"termid":"MONDO:0015344","xrefs":{"Monarch":{"xref_id":"0015344"}}}


id: GO:0046269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of toluene-4-sulfonate, 4-methylbenzenesulfonate, the anion of sulfonic acid attached to a methylbenzene molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"toluene-containing compound catabolic process","termid":"GO:0072491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"toluene-4-sulfonate catabolic process","synonyms":[{"name":"4-toluenesulfonate catabolic process","type":"exact"},{"name":"4-toluenesulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate breakdown","type":"exact"},{"name":"toluene-4-sulfonate catabolism","type":"exact"},{"name":"toluene-4-sulfonate degradation","type":"exact"},{"name":"toluene-4-sulphonate catabolic process","type":"exact"},{"name":"toluene-4-sulphonate catabolism","type":"exact"}],"termid":"GO:0046269"}


id: PBO:0076377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TAB3 antisense RNA 1","termid":"PBO:0076377"}


id: GO:0018892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cyclohexylsulfamate, also known as cyclamic acid. Sodium cyclohexylsulfamate (CHS-Na) was a widely used sweetening agent but was banned because of the suspicion of carcinogenicity and metabolic conversion to cyclohexylamine (CHA), a toxic substance. It is now used as a fungicide.","definition_xrefs":["UM-BBD_pathwayID:chs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"cyclohexylsulfamate metabolic process","synonyms":[{"name":"cyclohexylsulfamate metabolism","type":"exact"},{"name":"cyclohexylsulphamate metabolic process","type":"exact"},{"name":"cyclohexylsulphamate metabolism","type":"exact"}],"termid":"GO:0018892"}


id: MONDO:0012888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sarcoidosis in which the cause of the disease is a mutation in the BTNL2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoidosis, susceptibility to, 2","secondary_identifiers":["UMLS:C2676468","OMIM:612387","MEDGEN:436694"],"synonyms":[{"name":"BTNL2 sarcoidosis","type":"exact"},{"name":"SS2","type":"related"},{"name":"sarcoidosis caused by mutation in BTNL2","type":"exact"},{"name":"sarcoidosis, susceptibility to, 2","type":"exact"},{"name":"sarcoidosis, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to sarcoidosis 2","type":"related"}],"termid":"MONDO:0012888","xrefs":{"Monarch":{"xref_id":"0012888"}}}


id: MOD:00849
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a potassium atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium containing modified residue","synonyms":[{"name":"KRes","type":"exact"}],"termid":"MOD:00849"}


id: PBO:0034165
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_disappearance_of","termid":"PBO:0034165"}


id: PBO:0068683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 64, pseudogene","termid":"PBO:0068683"}


id: PR:000045537
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A GTP-binding nuclear protein spi1 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"GTP-binding nuclear protein spi1","termid":"PR:000027715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP-binding nuclear protein spi1 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1289.03c","synonyms":[{"name":"Spom-spi1","type":"exact"}],"termid":"PR:000045537"}


id: GO:0005782
data:
  {"annotated_genes":["SJAG_02630","SJAG_00947","SJAG_00702","SJAG_02496","SJAG_00706","SJAG_04823","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61831,72608,107331,113900,116802,117821,120371],"is_not":false,"summary":null,"term":"GO:0005782"}]},"cv_name":"cellular_component","definition":"The volume contained within the membranes of a peroxisome; in many cells the matrix contains a crystalloid core largely composed of urate oxidase.","definition_xrefs":["GOC:curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody lumen","termid":"GO:0031907"},{"relation_name":"part_of","term_name":"peroxisome","termid":"GO:0005777"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00706":null,"SJAG_00947":null,"SJAG_02496":null,"SJAG_02630":null,"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005777"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005777","GO:0005575"],"is_obsolete":false,"name":"peroxisomal matrix","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0031909"],"synonyms":[{"name":"peroxisomal lumen","type":"exact"}],"termid":"GO:0005782","terms_by_termid":{"GO:0005782":null}}


id: PBO:0038670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 4","termid":"PBO:0038670"}


id: GO:0002283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in morphology and behavior of a neutrophil resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor, leading to the initiation or perpetuation of an immune response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid cell activation involved in immune response","termid":"GO:0002275"},{"relation_name":"is_a","term_name":"neutrophil activation","termid":"GO:0042119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil activation involved in immune response","synonyms":[{"name":"neutrophil activation during immune response","type":"related"}],"termid":"GO:0002283"}


id: PBO:0085071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nonhistone component of centromeric chromatin; binds to histone H3 variant, Cse4p, and recruits it to centromeres; involved in the assembly and maintenance of Cse4-H4 at centromeres; required for kinetochore assembly and G2/M progression; may protect Cse4p from ubiquitination; homolog of mammalian HJURP","termid":"PBO:0085071"}


id: MOD:01541
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-114 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-114 reporter+balance reagent acylated residue","termid":"MOD:01535"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-114 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01541"}


id: SO:0001116
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A right handed helix is a region of peptide where the coiled conformation turns in a clockwise, right handed screw.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide_helix","termid":"SO:0001114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"right_handed_peptide_helix","secondary_identifiers":["BS:0000339"],"synonyms":[{"name":"helix","type":"related"},{"name":"right handed helix","type":"exact"}],"termid":"SO:0001116"}


id: PBO:0016528
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RECombination","termid":"PBO:0016528"}


id: MONDO:0020514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thymoma (obsolete MONDO:0020514)","termid":"MONDO:0020514","xrefs":{"Monarch":{"xref_id":"0020514"}}}


id: PBO:0067995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 297","termid":"PBO:0067995"}


id: GO:0004723
data:
  {"annotated_genes":["SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033192"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: protein serine phosphate + H2O = protein serine + phosphate; and protein threonine phosphate + H2O = protein threonine + phosphate. These reactions require the presence of calcium ions.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0004721","GO:0016788","GO:0140096","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"calcium-dependent protein serine/threonine phosphatase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0008596","Reactome:R-HSA-2025882"],"synonyms":[{"name":"calcineurin","type":"narrow"},{"name":"calcium-dependent protein serine/threonine phosphatase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0004723","terms_by_termid":{"GO:0033192":null}}


id: MONDO:1011701
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"combined deficiency of factors IX and XII, non-human animal","secondary_identifiers":["OMIA:001526"],"termid":"MONDO:1011701","xrefs":{"Monarch":{"xref_id":"1011701"}}}


id: GO:0070452
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111898],"is_not":false,"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of ergosterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ergosterol biosynthetic process","termid":"GO:0032443"},{"relation_name":"is_a","term_name":"positive regulation of sterol biosynthetic process","termid":"GO:0106120"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"ergosterol biosynthetic process","termid":"GO:0006696"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of ergosterol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of ergosterol biosynthetic process","type":"narrow"},{"name":"positive regulation of ergosterol anabolism","type":"exact"},{"name":"positive regulation of ergosterol biosynthesis","type":"exact"},{"name":"positive regulation of ergosterol formation","type":"exact"},{"name":"positive regulation of ergosterol synthesis","type":"exact"},{"name":"stimulation of ergosterol biosynthetic process","type":"narrow"},{"name":"up regulation of ergosterol biosynthetic process","type":"exact"},{"name":"up-regulation of ergosterol biosynthetic process","type":"exact"},{"name":"upregulation of ergosterol biosynthetic process","type":"exact"}],"termid":"GO:0070452","terms_by_termid":{"GO:0070452":null}}


id: GO:0043453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of an alkyne, any acyclic branched or unbranched hydrocarbon (compound composed only of carbon and hydrogen) having a carbon-carbon triple bond and the general formula CnH2n-2.","definition_xrefs":["Wikipedia:Alkyne","GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkyne metabolic process","termid":"GO:0043452"},{"relation_name":"is_a","term_name":"acetylenic compound biosynthetic process","termid":"GO:0120247"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"alkyne biosynthetic process","synonyms":[{"name":"alkyne anabolism","type":"exact"},{"name":"alkyne biosynthesis","type":"exact"},{"name":"alkyne formation","type":"exact"},{"name":"alkyne synthesis","type":"exact"}],"termid":"GO:0043453"}


id: PBO:0063561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PELO antisense RNA 1","termid":"PBO:0063561"}


id: MONDO:0859568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"macular dystrophy, retinal","termid":"MONDO:0031166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"macular dystrophy, retinal, 4","secondary_identifiers":["DOID:0070441","MEDGEN:1823960","UMLS:C5774187","OMIM:619977"],"termid":"MONDO:0859568","xrefs":{"Monarch":{"xref_id":"0859568"}}}


id: PBO:0056161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macroH2A.2 histone","termid":"PBO:0056161"}


id: GO:1990878
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gastrin stimulus.","definition_xrefs":["PMID:10348814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to peptide hormone stimulus","termid":"GO:0071375"},{"relation_name":"is_a","term_name":"response to gastrin","termid":"GO:1990867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gastrin","termid":"GO:1990878"}


id: GO:0043770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-demethylmenaquinol + S-adenosyl-L-methionine = a menaquinol + H+ + S-adenosyl-L-homocysteine. Reaction substrates can have varying polyprenyl side chain length.","definition_xrefs":["PMID:1444716","RHEA:42640","PMID:9045837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"demethylmenaquinone methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-11046","EC:2.1.1.163"],"termid":"GO:0043770"}


id: PBO:0051882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-3-phosphate synthase 1","termid":"PBO:0051882"}


id: MONDO:0019078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cranio-cerebello-cardiac (3C) syndrome is a rare multiple congenital anomalies syndrome characterized by craniofacial (prominent occiput and forehead, hypertelorism, ocular coloboma, cleft palate), cerebellar (Dandy-Walker malformation, cerebellar vermis hypoplasia) and cardiac (tetralogy of Fallot, atrial and ventricular septal defects) anomalies.","definition_xrefs":["Orphanet:7"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0020022"],"is_obsolete":false,"name":"Ritscher-Schinzel syndrome","secondary_identifiers":["MEDGEN:163220","OMIMPS:220210","SCTID:718556007","UMLS:C0796137","MESH:C535313","GARD:5666","DOID:0060565"],"synonyms":[{"name":"3C syndrome","type":"exact"},{"name":"CCC dysplasia","type":"exact"},{"name":"Craniocerebellocardiac dysplasia","type":"exact"},{"name":"Dandy-Walker like malformation with atrioventricular septal defect","type":"related"},{"name":"Dandy-Walker-like malformation with ASD","type":"related"},{"name":"Dandy-Walker-like malformation with atrioventricular septal defect","type":"related"},{"name":"Ritscher Schinzel syndrome","type":"related"},{"name":"Ritscher-Schinzel cranio-cerebello-cardiac syndrome","type":"related"},{"name":"Ritscher-Schinzel syndrome","type":"exact"},{"name":"cranio-cerebello-cardiac dysplasia","type":"related"},{"name":"craniocerebellocardiac dysplasia","type":"exact"}],"termid":"MONDO:0019078","xrefs":{"Monarch":{"xref_id":"0019078"}}}


id: PBO:0086358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative 4a-hydroxytetrahydrobiopterin dehydratase; green fluorescent protein (GFP)-fusion protein localizes to mitochondria and is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086358"}


id: PBO:0046310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease, poly(U) specific","termid":"PBO:0046310"}


id: GO:0002059
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to thymine.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase binding","termid":"GO:0002061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"thymine binding","termid":"GO:0002059"}


id: PBO:0069574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 847, pseudogene","termid":"PBO:0069574"}


id: PBO:0051283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1-22 (pseudogene)","termid":"PBO:0051283"}


id: PBO:0039742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein L4","termid":"PBO:0039742"}


id: PBO:0067237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 308, pseudogene","termid":"PBO:0067237"}


id: PBO:0070976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L19","termid":"PBO:0070976"}


id: FYPO:0006142
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the transition from G0 phase (quiescence) to G1 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal G0 to G1 transition","synonyms":[{"name":"normal exit from cell quiescence","type":"exact"}],"termid":"FYPO:0006142"}


id: PBO:0025425
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xeroderma pigementosum","termid":"PBO:0025425"}


id: GO:0061170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of hair follicle placode formation, the developmental process in which a hair placode forms. An hair follicle placode is a thickening of the ectoderm that will give rise to the hair follicle bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hair follicle development","termid":"GO:0051799"},{"relation_name":"is_a","term_name":"regulation of hair follicle placode formation","termid":"GO:0061168"},{"relation_name":"negatively_regulates","term_name":"hair follicle placode formation","termid":"GO:0060789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of hair follicle placode formation","termid":"GO:0061170"}


id: PBO:0070378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 4","termid":"PBO:0070378"}


id: MONDO:0017047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"axonal neuropathy","termid":"MONDO:0004183"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"infantile axonal neuropathy","secondary_identifiers":["Orphanet:2679","GARD:2996"],"termid":"MONDO:0017047","xrefs":{"Monarch":{"xref_id":"0017047"}}}


id: GO:0044382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which a CLRC complex is transported to, or maintained in, heterochromatin. CLRC complex is an active cullin-dependent E3 ubiquitin ligase complex essential for heterochromatin assembly by RNAi and histone H3K9 methylation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex localization","termid":"GO:0031503"},{"relation_name":"is_a","term_name":"protein localization to heterochromatin","termid":"GO:0097355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"CLRC complex localization to heterochromatin","synonyms":[{"name":"CLRC ubiquitin ligase complex localisation to heterochromatin","type":"exact"},{"name":"CLRC ubiquitin ligase complex localization to heterochromatin","type":"exact"}],"termid":"GO:0044382"}


id: GO:0043097
data:
  {"annotated_genes":["SJAG_04264","SJAG_05029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99748,115875],"is_not":false,"summary":null,"term":"GO:0043097"}]},"cv_name":"biological_process","definition":"Any process that generates a pyrimidine nucleoside, one of a family of organic molecules consisting of a pyrimidine base covalently bonded to a sugar ribose, from derivatives of it, without de novo synthesis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine-containing compound salvage","termid":"GO:0008655"},{"relation_name":"is_a","term_name":"nucleoside salvage","termid":"GO:0043174"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside biosynthetic process","termid":"GO:0046134"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04264":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine nucleoside salvage","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73614"],"termid":"GO:0043097","terms_by_termid":{"GO:0043097":null}}


id: FYPO:0005981
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the termination of RNA transcription RNA polymerase I from a DNA template is abnormal.","definition_xrefs":["PomBase:mah","GO:0006363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase I transcription","synonyms":[{"name":"abnormal RNA polymerase I transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase I transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase I transcription during vegetative growth","type":"exact"},{"name":"abnormal transcription termination from Pol I promoter","type":"exact"},{"name":"abnormal transcription termination from RNA polymerase I promoter","type":"exact"}],"termid":"FYPO:0005981"}


id: PBO:0048928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi membrane protein 1","termid":"PBO:0048928"}


id: MONDO:0015410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare otorhinolaryngologic disease characterized by the presence of a dermoid cyst, located on the dorsum of the nose, which presents a fistula, often extending to the intracranial region. Patients present a firm, slow-growing mass, which contains skin and dermal elements (including hair follicles and sebaceous glands), that do not transilluminate or compress, and may be associated with intermittent or chronic discharge of sebaceous material, soft tissue and skeletal deformity, and local infection. Meningitis, convulsions and cerebral abscess may be observed if intracranial extension exists.","definition_xrefs":["Orphanet:141219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysts and fistulae of the face and oral cavity","termid":"MONDO:0015476"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nasal dorsum fistula/cyst","secondary_identifiers":["MEDGEN:573381","UMLS:C0339853","GARD:19963"],"termid":"MONDO:0015410","xrefs":{"Monarch":{"xref_id":"0015410"}}}


id: GO:0008861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + formate = CoA + pyruvate.","definition_xrefs":["RHEA:11844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-acetyltransferase activity","termid":"GO:0016453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"formate C-acetyltransferase activity","secondary_identifiers":["MetaCyc:PYRUVFORMLY-RXN","EC:2.3.1.54"],"synonyms":[{"name":"PFL","type":"exact"},{"name":"formate acetyltransferase activity","type":"related"}],"termid":"GO:0008861"}


id: GO:0035378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which carbon dioxide (CO2) is transported across a membrane.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon dioxide transport","termid":"GO:0015670"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"carbon dioxide transmembrane transport","synonyms":[{"name":"carbon dioxide membrane transport","type":"exact"}],"termid":"GO:0035378"}


id: PR:O94698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 74 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02910","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein nsa1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.15","secondary_identifiers":["UniProtKB:O94698"],"synonyms":[{"name":"Spom972h-WDR74","type":"exact"}],"termid":"PR:O94698"}


id: MONDO:0020329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete classic Hodgkin lymphoma, lymphocyte-rich type (obsolete MONDO:0020329)","termid":"MONDO:0020329","xrefs":{"Monarch":{"xref_id":"0020329"}}}


id: PBO:0074034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 20 pseudogene 1","termid":"PBO:0074034"}


id: MONDO:0009038
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Craniosynostosis-fibular aplasia is an extremely rare genetic disease, reported in only 2 brothers to date, characterized by the combination of craniosynostosis (involving both coronal sutures), congenital absence of the fibula, cryptorchidism, and bilateral simian creases. Intelligence is normal and an autosomal recessive mode of inheritance has been proposed. There have been no further reports in the literature since 1972.","definition_xrefs":["Orphanet:1533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis-fibular aplasia syndrome","secondary_identifiers":["MEDGEN:347468","SCTID:732250002","UMLS:C1857492","MESH:C565665","OMIM:218550"],"synonyms":[{"name":"Lowry syndrome","type":"exact"},{"name":"craniosynostosis with fibular aplasia","type":"related"}],"termid":"MONDO:0009038","xrefs":{"Monarch":{"xref_id":"0009038"}}}


id: PBO:0039303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALK receptor tyrosine kinase","termid":"PBO:0039303"}


id: PR:Q10102
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC18G6.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C18G6.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.01c","synonyms":[{"name":"Spom972h-SPAC18G6.01c","type":"exact"}],"termid":"PR:Q10102"}


id: PBO:0028710
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0028710"}


id: PBO:0057088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 184","termid":"PBO:0057088"}


id: PBO:0030267
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_Dio-9","termid":"PBO:0030267"}


id: MONDO:0958195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngeal muscular dystrophy","termid":"MONDO:0008116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngeal muscular dystrophy 2","secondary_identifiers":["OMIM:620460","UMLS:C5830682","MEDGEN:1841318"],"termid":"MONDO:0958195","xrefs":{"Monarch":{"xref_id":"0958195"}}}


id: MONDO:0044984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the nasolacrimal duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lacrimal apparatus disorder","termid":"MONDO:0001854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nasolacrimal duct disorder","secondary_identifiers":["MEDGEN:636806","SCTID:95767006","UMLS:C0521744"],"synonyms":[{"name":"disease of nasolacrimal duct","type":"exact"},{"name":"disease or disorder of nasolacrimal duct","type":"exact"},{"name":"disorder of nasolacrimal duct","type":"exact"},{"name":"nasolacrimal duct disease","type":"exact"},{"name":"nasolacrimal duct disease or disorder","type":"exact"}],"termid":"MONDO:0044984","xrefs":{"Monarch":{"xref_id":"0044984"}}}


id: MONDO:1010496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus venosus that occurs in gray wolf.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus venosus, non-human animal","termid":"MONDO:1010023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus venosus, gray wolf","secondary_identifiers":["OMIA:001173-9612"],"termid":"MONDO:1010496","xrefs":{"Monarch":{"xref_id":"1010496"}}}


id: PBO:0076766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 5","termid":"PBO:0076766"}


id: GO:1904370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to actin cortical patch.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18216290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell cortex","termid":"GO:1904776"},{"relation_name":"regulates","term_name":"protein localization to actin cortical patch","termid":"GO:0044379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to actin cortical patch","synonyms":[{"name":"regulation of protein localisation to actin cortical patch","type":"exact"}],"termid":"GO:1904370"}


id: PBO:0091013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic/meiotic cohesin complex ATPase subunit Psm3/Smc3","termid":"PBO:0091013"}


id: FYPO:0004591
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle forms with microtubules emanating from only one pole after the cell has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar mitotic spindle","termid":"FYPO:0000276"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002399","FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0000120","FYPO:0000641","FYPO:0000337","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"monopolar mitotic spindle following normal mitosis","synonyms":[{"name":"monopolar mitotic spindle following normal mitosis and interphase","type":"exact"},{"name":"monopolar mitotic spindle following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"monopolar mitotic spindle following normal mitosis during vegetative growth","type":"exact"},{"name":"monopolar mitotic spindle following normal mitotic nuclear division","type":"exact"},{"name":"monopolar mitotic spindle following normal nuclear division during mitotic cell cycle","type":"exact"}],"termid":"FYPO:0004591"}


id: FYPO:0000519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of oxidative phosphorylation is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular respiration","termid":"FYPO:0000342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased oxidative phosphorylation","synonyms":[{"name":"decreased oxidative phosphorylation during mitotic cell cycle","type":"related"},{"name":"decreased oxidative phosphorylation during vegetative growth","type":"exact"},{"name":"oxidative phosphorylation: decreased","type":"related"},{"name":"reduced oxidative phosphorylation","type":"exact"}],"termid":"FYPO:0000519"}


id: PBO:0116628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 4 pseudogene 1","termid":"PBO:0116628"}


id: PBO:0005588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Gaf1","termid":"PBO:0005588"}


id: MONDO:0015430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 1 syndrome is an autosomal anomaly characterized by variable clinical features, most commonly including significant intrauterine and postnatal growth failure, developmental delay, intellectual disability, microcephaly, and dysmorphic facial features. Some less frequent clinical features are dysgenesis of corpus callosum, atrial septal defect, rocker bottom feet and clinodactyly.","definition_xrefs":["Orphanet:1437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 1 disorder","termid":"MONDO:0700008"},{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 1","secondary_identifiers":["GTR:AN0102272","NCIT:C36474","SCTID:47017007","GARD:1320","MEDGEN:539215","MESH:C535361","UMLS:C0265395"],"synonyms":[{"name":"R1","type":"related"},{"name":"Ring 1","type":"exact"},{"name":"Ring chromosome 1 syndrome","type":"related"},{"name":"Ring chromosome type 1","type":"exact"},{"name":"chromosome 1 ring","type":"related"},{"name":"chromosome 1, ring","type":"related"},{"name":"r(1) syndrome","type":"exact"}],"termid":"MONDO:0015430","xrefs":{"Monarch":{"xref_id":"0015430"}}}


id: GO:0048317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the seed are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed morphogenesis","termid":"GO:0048317"}


id: PBO:0012004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial mRNA processing protein Cox24/Pet20 (predicted)","termid":"PBO:0012004"}


id: GO:0050971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in magnetoception in which a mechanical stimulus is received and converted into a molecular signal. The stimulus is in the form of torque on particles such as magnetite which respond to a magnetic field.","definition_xrefs":["GOC:ai","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"magnetoreception by sensory perception of mechanical stimulus","termid":"GO:0050979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in magnetoreception","synonyms":[{"name":"magnetoception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"magnetoreception, detection of mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory detection of mechanical stimulus","type":"exact"},{"name":"magnetoreception, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during magnetoreception","type":"exact"},{"name":"sensory transduction of mechanical stimulus during magnetoreception","type":"exact"}],"termid":"GO:0050971"}


id: PBO:0063618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 3","termid":"PBO:0063618"}


id: GO:0047147
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5,6,7,8-tetrahydrofolate + trimethylsulfonium = (6S)-5-methyl-5,6,7,8-tetrahydrofolate + dimethyl sulfide + H+.","definition_xrefs":["EC:2.1.1.19","RHEA:13693"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"trimethylsulfonium-tetrahydrofolate N-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R02573","MetaCyc:2.1.1.19-RXN"],"synonyms":[{"name":"trimethylsulfonium-tetrahydrofolate methyltransferase activity","type":"related"},{"name":"trimethylsulfonium:tetrahydrofolate N-methyltransferase activity","type":"related"},{"name":"trimethylsulphonium-tetrahydrofolate N-methyltransferase activity","type":"exact"}],"termid":"GO:0047147"}


id: GO:0021994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the neural folds are fused extending from the initial closure points.","definition_xrefs":["GOC:jid","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of embryonic epithelium","termid":"GO:0016331"},{"relation_name":"part_of","term_name":"neural tube closure","termid":"GO:0001843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"progression of neural tube closure","termid":"GO:0021994"}


id: MONDO:0011138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any systemic lupus erythematosus in which the cause of the disease is a mutation in the TLR5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 1","secondary_identifiers":["UMLS:C1866373","MEDGEN:355700","OMIM:601744"],"synonyms":[{"name":"SLEB1","type":"exact"},{"name":"TLR5 systemic lupus erythematosus (disease)","type":"exact"},{"name":"susceptibility to systemic lupus erythematosus 1","type":"exact"},{"name":"systemic lupus erythematosus (disease) caused by mutation in TLR5","type":"exact"},{"name":"systemic lupus erythematosus, resistance to","type":"exact"},{"name":"systemic lupus erythematosus, resistance to, 1","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 1","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0011138","xrefs":{"Monarch":{"xref_id":"0011138"}}}


id: PBO:0000724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Orb6","termid":"PBO:0000724"}


id: MOD:00844
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes atoms of particular common isotopes with atoms of or groups containing (18)O.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope labeled residue","termid":"MOD:00702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O labeled residue","termid":"MOD:00844"}


id: SO:0001672
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A DNA sequence to which bacterial RNA polymerase sigma 54 binds, to begin transcription.","direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial_RNApol_promoter","termid":"SO:0000613"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial_RNApol_promoter_sigma54_element","synonyms":[{"name":"<new synonym>","type":"related"},{"name":"bacterial RNA polymerase promoter sigma54","type":"exact"}],"termid":"SO:0001672"}


id: MONDO:0016240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemimelia is a limb malformation characterized by the absence or gross shortening of the lower portion of one or more of the limbs. The condition is designated according to which bone of the distal arm or leg is absent or defective and includes fibular, radial, tibial, or ulnar hemimelia. Hemimelia ranges in severity.","definition_xrefs":["Orphanet:2130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hemimelia","secondary_identifiers":["NCIT:C34674","MedDRA:10019464","MEDGEN:9194","SCTID:33076008","GARD:18761","UMLS:C0018987"],"synonyms":[{"name":"longitudinal meromelia","type":"exact"}],"termid":"MONDO:0016240","xrefs":{"Monarch":{"xref_id":"0016240"}}}


id: MONDO:0032716
data:
  {"annotated_genes":["SJAG_01059"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88105],"is_not":false,"summary":null,"term":"MONDO:0032716"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01059":null},"genotype_count":0,"is_obsolete":false,"name":"leukoencephalopathy, acute reversible, with increased urinary alpha-ketoglutarate","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:18035","OMIM:618384","MEDGEN:1677730","UMLS:C5193068","Orphanet:615964"],"synonyms":[{"name":"ARLIAK","type":"related"},{"name":"LEUKOENCEPHALOPATHY, ACUTE REVERSIBLE, WITH INCREASED URINARY ALPHA-KETOGLUTARATE","type":"related"},{"name":"acute reversible leukoencephalopathy due to SLC13A3 deficiency","type":"exact"},{"name":"acute reversible leukoencephalopathy due to sodium-dependent dicarboxylate transporter deficiency","type":"exact"},{"name":"acute reversible leukoencephalopathy with increased urinary alpha-ketoglutarate","type":"exact"}],"termid":"MONDO:0032716","terms_by_termid":{"MONDO:0032716":null},"xrefs":{"Monarch":{"xref_id":"0032716"}}}


id: GO:0001400
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region where the mating projection meets the bulk of the cell, in unicellular fungi exposed to mating pheromone.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mating projection","termid":"GO:0005937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection base","synonyms":[{"name":"base of shmoo tip","type":"narrow"},{"name":"conjugation tube base","type":"narrow"}],"termid":"GO:0001400"}


id: GO:0021850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The division of glioblasts in the subpallium. These cells will give rise to oligodendrocytes.","definition_xrefs":["GOC:cls","GOC:dph","GOC:dgh","GOC:jid","PMID:12626695","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioblast division","termid":"GO:0048860"},{"relation_name":"part_of","term_name":"subpallium cell proliferation in forebrain","termid":"GO:0022012"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"subpallium glioblast cell division","synonyms":[{"name":"glioblast cell division in subpallium","type":"exact"},{"name":"glioblast division in ventral telencephalon","type":"exact"}],"termid":"GO:0021850"}


id: PBO:0065226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 7, synaptic","termid":"PBO:0065226"}


id: PBO:0054497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1897","termid":"PBO:0054497"}


id: PBO:0055571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3007","termid":"PBO:0055571"}


id: PBO:0028569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleotide-excision_repair_during_cellular_response_to_UV","termid":"PBO:0028569"}


id: PBO:0048415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATA3 antisense RNA 1","termid":"PBO:0048415"}


id: FYPO:0004985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form telomeres that become entwined and resistant to separation.","definition_xrefs":["PomBase:mah","PMID:21098121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere morphology during vegetative growth","termid":"FYPO:0002254"},{"relation_name":"is_a","term_name":"abnormal telomere structure","termid":"FYPO:0006510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"entangled telomeres during vegetative growth","synonyms":[{"name":"entangled telomeres during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004985"}


id: FYPO:0003324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the spectrum of light absorption observed in whole cells or isolated mitochondria, and attributed to cytochromes present, differs from wild type.","definition_xrefs":["PomBase:mah","PMID:8668131","PMID:22349564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"altered cytochrome absorption spectrum","synonyms":[{"name":"altered mitochondrial absorption spectrum","type":"related"}],"termid":"FYPO:0003324"}


id: FYPO:0007445
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which autophagic degradation of the endoplasmic reticulum is abnormal.","definition_xrefs":["GO:0061709","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal reticulophagy","termid":"FYPO:0008083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal reticulophagy during vegetative growth","synonyms":[{"name":"abnormal ER autophagy during vegetative growth","type":"exact"},{"name":"abnormal ER degradation during vegetative growth","type":"related"},{"name":"abnormal ER-phagy during vegetative growth","type":"exact"},{"name":"abnormal endoplasmic reticulum autophagy during vegetative growth","type":"exact"},{"name":"abnormal reticulophagy during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007445"}


id: PATO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000093 chemical sensitivity (obsolete PATO:0000093)","termid":"PATO:0000093"}


id: PBO:0065215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosyl pyrophosphate synthetase 1 pseudogene 1","termid":"PBO:0065215"}


id: PR:Q9UUE1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pyruvate carboxylase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17G9.11c","secondary_identifiers":["UniProtKB:Q9UUE1"],"synonyms":[{"name":"PCB (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC17G9.11c","type":"related"},{"name":"Spom972h-PC","type":"exact"},{"name":"pyruvic carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUE1"}


id: PBO:0079520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosinase like (pseudogene)","termid":"PBO:0079520"}


id: MONDO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the wall of the jejunum. Representative examples include adenoma, carcinoma, and lymphoma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine neoplasm","termid":"MONDO:0004251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"jejunal neoplasm","secondary_identifiers":["MEDGEN:7187","NCIT:C8401","UMLS:C0022374","MESH:D007580","SCTID:126834003","DOID:3218"],"synonyms":[{"name":"jejunal tumor","type":"exact"},{"name":"jejunal tumour","type":"exact"},{"name":"jejunum neoplasm","type":"exact"},{"name":"jejunum neoplasm (disease)","type":"exact"},{"name":"jejunum tumor","type":"exact"},{"name":"jejunum tumour","type":"exact"},{"name":"neoplasm of jejunum","type":"exact"},{"name":"neoplasm of the jejunum","type":"exact"},{"name":"tumor of jejunum","type":"exact"},{"name":"tumor of the jejunum","type":"exact"},{"name":"tumour of jejunum","type":"exact"},{"name":"tumour of the jejunum","type":"exact"}],"termid":"MONDO:0002564","xrefs":{"Monarch":{"xref_id":"0002564"}}}


id: GO:0046007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate or extent of activated T cell proliferation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell proliferation","termid":"GO:0042130"},{"relation_name":"is_a","term_name":"regulation of activated T cell proliferation","termid":"GO:0046006"},{"relation_name":"negatively_regulates","term_name":"activated T cell proliferation","termid":"GO:0050798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of activated T cell proliferation","synonyms":[{"name":"down regulation of activated T cell proliferation","type":"exact"},{"name":"down-regulation of activated T cell proliferation","type":"exact"},{"name":"downregulation of activated T cell proliferation","type":"exact"},{"name":"inhibition of activated T cell proliferation","type":"narrow"},{"name":"negative regulation of activated T lymphocyte proliferation","type":"exact"},{"name":"negative regulation of activated T-cell proliferation","type":"exact"},{"name":"negative regulation of activated T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0046007"}


id: MONDO:0020678
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hearing loss in which the root cause lies in the inner ear or sensory organ (cochlea and associated structures) or the vestibulocochlear nerve (cranial nerve VIII).","definition_xrefs":["Wikipedia:Sensorineural_hearing_loss"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss disorder","termid":"MONDO:0005365"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensorineural hearing loss disorder","secondary_identifiers":["NCIT:C26739","UMLS:C0018784","EFO:1001176","HP:0000407","MEDGEN:9164","SCTID:60700002","DOID:10003"],"synonyms":[{"name":"SNHL","type":"exact"},{"name":"neurosensory deafness","type":"related"},{"name":"sensorineural deafness","type":"exact"},{"name":"sensorineural hearing loss","type":"exact"},{"name":"sensorineural hearing loss disorder","type":"exact"}],"termid":"MONDO:0020678","xrefs":{"Monarch":{"xref_id":"0020678"}}}


id: MONDO:0007365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any benign neonatal seizures in which the cause of the disease is a mutation in the KCNQ2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neonatal seizures","termid":"MONDO:0016027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial neonatal, 1","secondary_identifiers":["OMIM:121200","UMLS:C3149074","MESH:C567743","MEDGEN:460425"],"synonyms":[{"name":"BFNS1","type":"related"},{"name":"KCNQ2 benign neonatal seizures","type":"exact"},{"name":"benign neonatal seizures caused by mutation in KCNQ2","type":"exact"},{"name":"epilepsy, benign neonatal, 1, and/or myokymia","type":"related"},{"name":"myokymia","type":"broad"},{"name":"seizures, benign familial neonatal, 1","type":"exact"},{"name":"seizures, benign familial neonatal, 1, and/or myokymia","type":"related"},{"name":"seizures, benign familial neonatal, type 1","type":"exact"},{"name":"seizures, benign neonatal, 1","type":"exact"}],"termid":"MONDO:0007365","xrefs":{"Monarch":{"xref_id":"0007365"}}}


