# terms

id: PBO:0074387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG8 nonsense mediated mRNA decay factor","termid":"PBO:0074387"}


id: PBO:0090171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorismate synthase Aro2","termid":"PBO:0090171"}


id: PBO:0053750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 987","termid":"PBO:0053750"}


id: MONDO:0003883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebellar liponeurocytoma (obsolete MONDO:0003883)","termid":"MONDO:0003883","xrefs":{"Monarch":{"xref_id":"0003883"}}}


id: MONDO:0004938
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89327],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007079"}]},"cv_name":"mondo","definition":"The psychological or physiological need to take a substance in order to experience its effects or to avoid the effects of its absence.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance-related disorder","termid":"MONDO:0002494"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"is_obsolete":false,"name":"substance dependence","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:304.60","MEDGEN:20989","DOID:9973","NCIT:C35458","SCTID:2403008","UMLS:C0038580"],"synonyms":[{"name":"dependence","type":"exact"}],"termid":"MONDO:0004938","terms_by_termid":{"MONDO:0007079":null},"xrefs":{"Monarch":{"xref_id":"0004938"}}}


id: PBO:0004544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein Thp1-Sac3 complex subunit (predicted)","termid":"PBO:0004544"}


id: GO:0052181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the resistance gene-dependent defense response of the symbiont. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont defense response (obsolete GO:0052181)","termid":"GO:0052181"}


id: GO:2000032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secondary shoot formation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of morphogenesis of a branching structure","termid":"GO:0060688"},{"relation_name":"is_a","term_name":"regulation of plant organ formation","termid":"GO:1905428"},{"relation_name":"regulates","term_name":"secondary shoot formation","termid":"GO:0010223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of secondary shoot formation","synonyms":[{"name":"regulation of auxiliary shoot formation","type":"related"},{"name":"regulation of axillary shoot formation","type":"related"},{"name":"regulation of axillary shoot system formation","type":"exact"},{"name":"regulation of shoot branching","type":"related"}],"termid":"GO:2000032"}


id: PBO:0042290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD2BP2 divergent transcript","termid":"PBO:0042290"}


id: GO:0160047
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + muramyl dipeptide = ADP + H+ + 6-O-phospho-muramyl dipeptide.","definition_xrefs":["PMID:36002575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"muramyl dipeptide kinase activity","secondary_identifiers":["RHEA:75935"],"termid":"GO:0160047"}


id: MOD:01025
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to 3'-bromo-L-tyrosine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monobrominated tyrosine","termid":"MOD:01000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-bromo-L-tyrosine","synonyms":[{"name":"3'-BrTyr","type":"exact"}],"termid":"MOD:01025"}


id: GO:0120251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a hydrocarbon, a compound consisting of carbon and hydrogen only.","definition_xrefs":["GOC:krc","Wikipedia:Hydrocarbon"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"hydrocarbon metabolic process","termid":"GO:0120252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hydrocarbon biosynthetic process","synonyms":[{"name":"hydrocarbon anabolism","type":"exact"},{"name":"hydrocarbon biosynthesis","type":"exact"},{"name":"hydrocarbon formation","type":"exact"},{"name":"hydrocarbon synthesis","type":"exact"}],"termid":"GO:0120251"}


id: PR:O94393
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S proteasome non-ATPase regulatory subunit 9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR12651:SF0","OMA:SCHPO02190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S proteasome regulatory subunit p27 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2H10.02c","secondary_identifiers":["UniProtKB:O94393"],"synonyms":[{"name":"Spom972h-PSMD9","type":"exact"}],"termid":"PR:O94393"}


id: PBO:0054407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1803","termid":"PBO:0054407"}


id: GO:0008990
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N2-methylguanine.","definition_xrefs":["PMID:17389639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140098","GO:0003824","GO:0016741"],"is_obsolete":false,"name":"rRNA (guanine-N2-)-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07234"],"synonyms":[{"name":"S-adenosyl-L-methionine:rRNA (guanine-2-N-)-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:rRNA (guanine-N2-)-methyltransferase activity","type":"related"},{"name":"ribosomal ribonucleate guanine-2-methyltransferase activity","type":"related"}],"termid":"GO:0008990"}


id: PBO:0058710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6838","termid":"PBO:0058710"}


id: PBO:0061178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 8-1","termid":"PBO:0061178"}


id: MONDO:0027694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial amyotrophic lateral sclerosis","termid":"MONDO:0005144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 23","secondary_identifiers":["DOID:0080225","OMIM:617839","MEDGEN:1645924","UMLS:C4693381","GARD:16262"],"synonyms":[{"name":"ALS23","type":"exact"},{"name":"amyotrophic lateral sclerosis 23","type":"related"}],"termid":"MONDO:0027694","xrefs":{"Monarch":{"xref_id":"0027694"}}}


id: PBO:0060993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal hypoxia inducible, placenta associated","termid":"PBO:0060993"}


id: MONDO:0033925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Graves disease","termid":"MONDO:0005364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pediatric-onset Graves disease","secondary_identifiers":["MEDGEN:1842979","Orphanet:525731","GARD:22190","UMLS:C5680179"],"termid":"MONDO:0033925","xrefs":{"Monarch":{"xref_id":"0033925"}}}


id: GO:0061069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the male urethra over time from its initial formation to the mature structure. The male urethra is a renal system organ that carries urine from the bladder through the penis to outside the body.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethra development","termid":"GO:0061068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male urethra development","termid":"GO:0061069"}


id: MONDO:0005950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Poisoning caused by ingestion of food harboring species of salmonella. Conditions of raising, shipping, slaughtering, and marketing of domestic animals contribute to the spread of this bacterium in the food supply.","definition_xrefs":["MESH:D012478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salmonellosis","termid":"MONDO:0000827"},{"relation_name":"is_a","term_name":"gastroenteritis","termid":"MONDO:0002269"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Salmonella gastroenteritis","secondary_identifiers":["ICD9:003.0","SCTID:42338000","MEDGEN:48541","EFO:0007475","UMLS:C0036114"],"synonyms":[{"name":"Salmonella caused gastroenteritis","type":"exact"}],"termid":"MONDO:0005950","xrefs":{"Monarch":{"xref_id":"0005950"}}}


id: PATO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A polyploidy quality inhering in a bearer by virtue of the bearer's containing five homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Pentaploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyploid","termid":"PATO:0001377"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentaploid","termid":"PATO:0001383"}


id: PBO:0047433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FCF1 pseudogene 4","termid":"PBO:0047433"}


id: FYPO:0007129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of homoserine O-acetyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"abnormal homoserine O-acetyltransferase activity","termid":"FYPO:0007129"}


id: FYPO:0003078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the autophosphorylation of one or more specific proteins, or of specific protein sites, does not occur during a cellular response to DNA damage. Protein autophosphorylation is the phosphorylation by a protein of one or more of its own amino acid residues, or residues on an identical protein.","definition_xrefs":["GO:0031952","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein phosphorylation during cellular response to DNA damage","termid":"FYPO:0002898"},{"relation_name":"is_a","term_name":"abolished protein autophosphorylation during vegetative growth","termid":"FYPO:0003020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"abolished protein autophosphorylation during cellular response to DNA damage","synonyms":[{"name":"abolished protein autophosphorylation during cellular response to DNA damage during mitotic cell cycle","type":"related"},{"name":"abolished protein autophosphorylation during cellular response to DNA damage during vegetative growth","type":"exact"},{"name":"protein autophosphorylation abolished during cellular response to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0003078"}


id: PBO:0081582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 511","termid":"PBO:0081582"}


id: MONDO:1011567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurofibromatosis that occurs in teleost fishes.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis, non-human animal","termid":"MONDO:1011437"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromatosis, teleost fishes","secondary_identifiers":["OMIA:000716-32443"],"termid":"MONDO:1011567","xrefs":{"Monarch":{"xref_id":"1011567"}}}


id: PBO:0034584
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_polarity_during_G0_to_G1_transition","termid":"PBO:0034584"}


id: PBO:0048610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 2","termid":"PBO:0048610"}


id: PBO:0060317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYLK pseudogene 2","termid":"PBO:0060317"}


id: PBO:0004914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein O-mannosyltransferase Ogm4","termid":"PBO:0004914"}


id: GO:0052570
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of reactive oxygen species produced as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete response to defense-related symbiont reactive oxygen species production (obsolete GO:0052570)","synonyms":[{"name":"response to defense-related symbiont reactive oxygen species production","type":"exact"}],"termid":"GO:0052570"}


id: GO:0019237
data:
  {"annotated_genes":["SJAG_00307","SJAG_03183","SJAG_01745","SJAG_03217"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93359,104085,107503,118530],"is_not":false,"summary":null,"term":"GO:0019237"}]},"cv_name":"molecular_function","definition":"Binding to a centromere, a region of chromosome where the spindle fibers attach during mitosis and meiosis.","definition_xrefs":["SO:0000577","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00307":null,"SJAG_01745":null,"SJAG_03183":null,"SJAG_03217":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"centromeric DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"centromere binding","type":"exact"}],"termid":"GO:0019237","terms_by_termid":{"GO:0019237":null}}


id: MONDO:0015882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of pancreatic neoplasm that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare tumor of pancreas (obsolete MONDO:0015882)","secondary_identifiers":["MedDRA:10061902","Orphanet:180824"],"synonyms":[{"name":"rare pancreas neoplasm","type":"exact"},{"name":"rare pancreas tumor","type":"exact"},{"name":"rare pancreatic neoplasm","type":"exact"},{"name":"rare pancreatic tumor","type":"exact"}],"termid":"MONDO:0015882","xrefs":{"Monarch":{"xref_id":"0015882"}}}


id: PBO:0090957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-binding protein associated factor Taf2","termid":"PBO:0090957"}


id: MONDO:0035786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic cloacal malformation (obsolete MONDO:0035786)","secondary_identifiers":["Orphanet:600998"],"termid":"MONDO:0035786","xrefs":{"Monarch":{"xref_id":"0035786"}}}


id: PBO:0070357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 30","termid":"PBO:0070357"}


id: PBO:0051295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1D-22 (pseudogene)","termid":"PBO:0051295"}


id: PBO:0063581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pescadillo ribosomal biogenesis factor 1 pseudogene 1","termid":"PBO:0063581"}


id: PBO:0077426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 163","termid":"PBO:0077426"}


id: PBO:0086170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for synthesis of diphthamide; required along with Dph1p, Kti11p, Jjj3p, and Dph5p; diphthamide is a modified histidine residue of translation elongation factor 2 (Eft1p or Eft2p); forms a complex with Dph1p that catalyzes the first step of diphthamide biosynthesis","termid":"PBO:0086170"}


id: PBO:0040790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beaded filament structural protein 1","termid":"PBO:0040790"}


id: FYPO:0008385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which autophagic degradation of the nucleus during Endoplasmic Reticulum stress is abolished.","definition_xrefs":["PMID:37939137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleophagy","termid":"FYPO:0008085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished nucleophagy during cellular response to Endoplasmic Reticulum stress","termid":"FYPO:0008385"}


id: PBO:0073677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIRPG antisense RNA 1","termid":"PBO:0073677"}


id: GO:1901857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular respiration.","definition_xrefs":["GOC:TermGenie","PMID:23150719","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"positively_regulates","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of cellular respiration","synonyms":[{"name":"activation of cellular respiration","type":"narrow"},{"name":"activation of oxidative metabolic process","type":"exact"},{"name":"activation of oxidative metabolism","type":"exact"},{"name":"activation of respiration","type":"broad"},{"name":"positive regulation of oxidative metabolic process","type":"exact"},{"name":"positive regulation of oxidative metabolism","type":"exact"},{"name":"positive regulation of respiration","type":"broad"},{"name":"up regulation of cellular respiration","type":"exact"},{"name":"up regulation of oxidative metabolic process","type":"exact"},{"name":"up regulation of oxidative metabolism","type":"exact"},{"name":"up regulation of respiration","type":"broad"},{"name":"up-regulation of cellular respiration","type":"exact"},{"name":"up-regulation of oxidative metabolic process","type":"exact"},{"name":"up-regulation of oxidative metabolism","type":"exact"},{"name":"up-regulation of respiration","type":"broad"},{"name":"upregulation of cellular respiration","type":"exact"},{"name":"upregulation of oxidative metabolic process","type":"exact"},{"name":"upregulation of oxidative metabolism","type":"exact"},{"name":"upregulation of respiration","type":"broad"}],"termid":"GO:1901857"}


id: GO:0017018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphomyosin + H2O = myosin + phosphate.","definition_xrefs":["EC:3.1.3.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine phosphatase activity","termid":"GO:0004722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004721"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0004721","GO:0140096","GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"myosin phosphatase activity","secondary_identifiers":["GO:0017019","Reactome:R-HSA-390593","Reactome:R-HSA-445699"],"synonyms":[{"name":"myosin phosphatase myosin binding","type":"related"},{"name":"myosin phosphatase, intrinsic catalyst activity","type":"exact"}],"termid":"GO:0017018"}


id: GO:0071968
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: galactosyl-glucosyl3-heptosyl3-KDO2-lipid A-bisphosphate + ADP-L-glycero-beta-D-manno-heptose = lipid A-core + ADP + H+.","definition_xrefs":["MetaCyc:RXN0-5127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide heptosyltransferase activity","termid":"GO:0008920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"lipid A-core heptosyltransferase activity","secondary_identifiers":["RHEA:30019"],"termid":"GO:0071968"}


id: PBO:0067986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 288","termid":"PBO:0067986"}


id: PBO:0051757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate multikinase pseudogene 1","termid":"PBO:0051757"}


id: FYPO:0002629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of galactose measured in the cell wall is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"},{"relation_name":"is_a","term_name":"decreased level of substance in cell wall during vegetative growth","termid":"FYPO:0002628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"galactose absent from cell wall","synonyms":[{"name":"galactose absent from cell surface","type":"related"},{"name":"galactose absent from cell wall during mitotic cell cycle","type":"related"},{"name":"galactose absent from cell wall during vegetative growth","type":"exact"}],"termid":"FYPO:0002629"}


id: MONDO:0850152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sensory system benign neoplasm that is located in the auditory system.","definition_xrefs":["DOID:0080619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ benign neoplasm","termid":"MONDO:0000633"},{"relation_name":"is_a","term_name":"auditory system disorder","termid":"MONDO:0002409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auditory system benign neoplasm","termid":"MONDO:0850152","xrefs":{"Monarch":{"xref_id":"0850152"}}}


id: GO:0032650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-1 alpha production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"regulates","term_name":"interleukin-1 alpha production","termid":"GO:0032610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-1 alpha production","secondary_identifiers":["GO:0050705","GO:0050721"],"synonyms":[{"name":"regulation of IL-1 alpha production","type":"exact"},{"name":"regulation of interleukin-1 alpha biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-1 alpha secretion","type":"narrow"}],"termid":"GO:0032650"}


id: PBO:0074727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 84","termid":"PBO:0074727"}


id: PBO:0080782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related, Y-linked pseudogene 2","termid":"PBO:0080782"}


id: MONDO:0044226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete defective interfering particle induction, control of (obsolete MONDO:0044226)","secondary_identifiers":["HGNC:12678"],"synonyms":[{"name":"Dipi, control of","type":"related"},{"name":"defective interfering particle induction, control OF","type":"related"},{"name":"homologous viral interference","type":"related"},{"name":"vesicular stomatitis Virus defective interfering particle repressor","type":"related"}],"termid":"MONDO:0044226","xrefs":{"Monarch":{"xref_id":"0044226"}}}


id: MONDO:0003311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasms of the endometrial stroma that sometimes involve the myometrium. These tumors contain cells that may closely or remotely resemble the normal stromal cells. Endometrial stromal neoplasms are divided into three categories: (1) benign stromal nodules; (2) low-grade stromal sarcoma, or endolymphatic stromal myosis; and (3) malignant endometrial stromal sarcoma (sarcoma, endometrial stromal).","definition_xrefs":["MESH:D036821"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"endometrial cancer","termid":"MONDO:0011962"},{"relation_name":"is_a","term_name":"endometrium neoplasm","termid":"MONDO:0021251"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endometrial stromal tumor","secondary_identifiers":["SCTID:446887007","UMLS:C0334695","DOID:5166","ICD9:239.5","EFO:1000920","MEDGEN:87280"],"synonyms":[{"name":"endometrial stroma neoplasm","type":"exact"},{"name":"endometrial stroma tumor","type":"exact"},{"name":"endometrial stroma tumour","type":"exact"},{"name":"endometrial stromal neoplasm","type":"exact"},{"name":"endometrial stromal tumor","type":"exact"},{"name":"endometrial stromal tumor (morphologic abnormality)","type":"exact"},{"name":"endometrial stromal tumour (morphologic abnormality)","type":"exact"},{"name":"neoplasm of endometrial stroma","type":"exact"},{"name":"tumor of endometrial stroma","type":"exact"},{"name":"tumour of endometrial stroma","type":"exact"}],"termid":"MONDO:0003311","xrefs":{"Monarch":{"xref_id":"0003311"}}}


id: GO:0004991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with parathyroid hormone to initiate a change in cell activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"parathyroid hormone receptor activity","termid":"GO:0004991"}


id: GO:0021795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of cells from one site to another in the cerebral cortex.","definition_xrefs":["GO_REF:0000021","GOC:dph","GOC:cls","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telencephalon cell migration","termid":"GO:0022029"},{"relation_name":"part_of","term_name":"cerebral cortex development","termid":"GO:0021987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex cell migration","termid":"GO:0021795"}


id: GO:0061367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in the behaviour of an organism as a result of an acetic acid pain stimulus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavioral response to chemical pain","termid":"GO:0061366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"behavioral response to acetic acid induced pain","termid":"GO:0061367"}


id: GO:0032186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Control of the formation, spatial distribution, and breakdown of a septin ring located at the bud neck.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin ring organization","termid":"GO:0031106"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic cytokinesis","termid":"GO:0000281"},{"relation_name":"part_of","term_name":"cytokinesis, division site positioning","termid":"GO:0007105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000281"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0000281","GO:0007049","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"cellular bud neck septin ring organization","synonyms":[{"name":"cellular bud neck septin ring organisation","type":"exact"}],"termid":"GO:0032186"}


id: GO:1900218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in metanephric nephron tubule development.","definition_xrefs":["PMID:17314325","GOC:mtg_kidney_jan10","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900217"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in metanephric nephron tubule development","termid":"GO:1900205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in metanephric nephron tubule development","synonyms":[{"name":"down regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"down regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"down regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"down regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"down regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"down regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"down-regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"down-regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"down-regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"down-regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"down-regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"downregulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"downregulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of apoptotic process involved in metanephric nephron tubule development","type":"exact"},{"name":"downregulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"downregulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"downregulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"downregulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of apoptotic process involved in metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"inhibition of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"inhibition of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"inhibition of type I programmed cell death of metanephric nephron tubule development","type":"narrow"},{"name":"negative regulation of apoptosis of metanephric nephron tubule development","type":"narrow"},{"name":"negative regulation of apoptotic cell death of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of apoptotic process of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of apoptotic program of metanephric nephron tubule development","type":"narrow"},{"name":"negative regulation of apoptotic programmed cell death of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of programmed cell death by apoptosis of metanephric nephron tubule development","type":"exact"},{"name":"negative regulation of signaling (initiator) caspase activity of metanephric nephron tubule development","type":"related"},{"name":"negative regulation of type I programmed cell death of metanephric nephron tubule development","type":"narrow"}],"termid":"GO:1900218"}


id: PBO:0052289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratocan","termid":"PBO:0052289"}


id: MONDO:0008969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholesterol pneumonia","secondary_identifiers":["SCTID:233728004","MEDGEN:154291","UMLS:C0549472","ICD9:516.8","MESH:C535937","OMIM:215030"],"synonyms":[{"name":"cholesterol pneumonia","type":"exact"},{"name":"familiaere cholesterin-Pneumonie","type":"related"}],"termid":"MONDO:0008969","xrefs":{"Monarch":{"xref_id":"0008969"}}}


id: PBO:0032698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_binding_during_cellular_response_to_hydroxyurea","termid":"PBO:0032698"}


id: GO:0046992
data:
  {"annotated_genes":["SJAG_00832"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105643],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061686"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00832":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.21.-.-"],"synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors","type":"narrow"}],"termid":"GO:0046992","terms_by_termid":{"GO:0061686":null}}


id: PBO:0047817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box N3 pseudogene 1","termid":"PBO:0047817"}


id: SO:0000405
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Y RNAs are components of the Ro ribonucleoprotein particle (Ro RNP), in association with Ro60 and La proteins. The Y RNAs and Ro60 and La proteins are well conserved, but the function of the Ro RNP is not known. In humans the RNA component can be one of four small RNAs: hY1, hY3, hY4 and hY5. These small RNAs are predicted to fold into a conserved secondary structure containing three stem structures. The largest of the four, hY1, contains an additional hairpin.","direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA","termid":"SO:0000655"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Y_RNA"],"synonyms":[{"name":"INSDC_feature:ncRNA","type":"broad"},{"name":"INSDC_qualifier:Y_RNA","type":"exact"},{"name":"Y RNA","type":"exact"}],"termid":"SO:0000405"}


id: GO:0048354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of mucilage that occur as part of seed coat development; mucilage is normally synthesized during seed coat development.","definition_xrefs":["GOC:dph","GOC:jid","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucilage biosynthetic process","termid":"GO:0010192"},{"relation_name":"part_of","term_name":"seed coat development","termid":"GO:0010214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mucilage biosynthetic process involved in seed coat development","synonyms":[{"name":"mucilage anabolism during seed coat development","type":"exact"},{"name":"mucilage biosynthetic process during seed coat development","type":"related"},{"name":"mucilage formation during seed coat development","type":"exact"},{"name":"mucilage synthesis during seed coat development","type":"exact"}],"termid":"GO:0048354"}


id: GO:0005563
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transfer RNA (obsolete GO:0005563)","synonyms":[{"name":"transfer RNA","type":"exact"}],"termid":"GO:0005563"}


id: PBO:0049776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 9 pseudogene 3","termid":"PBO:0049776"}


id: PBO:0071103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 105","termid":"PBO:0071103"}


id: GO:0034045
data:
  {"annotated_genes":["SJAG_04963","SJAG_05017","SJAG_01876","SJAG_01251","SJAG_04860","SJAG_04219","SJAG_00115","SJAG_02640","SJAG_00763","SJAG_01382","SJAG_03851","SJAG_04655","SJAG_06309","SJAG_00645","SJAG_04502","SJAG_02699","SJAG_02441","SJAG_03136","SJAG_04232","SJAG_00004","SJAG_00059","SJAG_03100","SJAG_01783"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60598,61472,61640,63468,66923,73773,74030,74642,75345,81546,81627,81656,81800,94635,94919,96829,101712,112322,113572,113744,117220,117281],"is_not":false,"summary":null,"term":"GO:0034045"},{"annotations":[96632],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0097632"}]},"cv_name":"cellular_component","definition":"A cellular membrane associated with the phagophore assembly site.","definition_xrefs":["PMID:17382324","GOC:mah","GOC:rph","PMID:16874040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"phagophore assembly site","termid":"GO:0000407"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00004":null,"SJAG_00059":null,"SJAG_00115":null,"SJAG_00645":null,"SJAG_00763":null,"SJAG_01251":null,"SJAG_01382":null,"SJAG_01783":null,"SJAG_01876":null,"SJAG_02441":null,"SJAG_02640":null,"SJAG_02699":null,"SJAG_03100":null,"SJAG_03136":null,"SJAG_03851":null,"SJAG_04219":null,"SJAG_04232":null,"SJAG_04502":null,"SJAG_04655":null,"SJAG_04860":null,"SJAG_04963":null,"SJAG_05017":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000407"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0000407","GO:0005575"],"is_obsolete":false,"name":"phagophore assembly site membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"PAS membrane","type":"exact"},{"name":"isolation membrane","type":"related"},{"name":"phagophore","type":"related"},{"name":"pre-autophagosomal structure membrane","type":"narrow"}],"termid":"GO:0034045","terms_by_termid":{"GO:0034045":null,"GO:0097632":null}}


id: PATO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000129 absolute weight (obsolete PATO:0000129)","termid":"PATO:0000129"}


id: PBO:0064238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol specific phospholipase C X domain containing 2","termid":"PBO:0064238"}


id: GO:1904475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of small GTPase binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:15798216"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of small GTPase binding (obsolete GO:1904475)","synonyms":[{"name":"regulation of Ras GTPase binding","type":"narrow"}],"termid":"GO:1904475"}


id: GO:0015754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which D-allose is transported across a lipid bilayer, from one side of a membrane to the other. Allose is an aldohexose similar to glucose, differing only in the configuration of the hydroxyl group of C-3.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transport","termid":"GO:0008645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"D-allose transmembrane transport","synonyms":[{"name":"allose transmembrane transport","type":"narrow"},{"name":"allose transport","type":"related"}],"termid":"GO:0015754"}


id: GO:0090292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the nuclear matrix, the dense fibrillar network lying on the inner side of the nuclear membrane, is directly or indirectly linked to the nuclear membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear matrix organization","termid":"GO:0043578"},{"relation_name":"is_a","term_name":"maintenance of protein location in nucleus","termid":"GO:0051457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nuclear matrix anchoring at nuclear membrane","synonyms":[{"name":"nucleoskeleton anchoring at nuclear membrane","type":"exact"}],"termid":"GO:0090292"}


id: GO:0036405
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the cell outer membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:md","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of cell outer membrane (obsolete GO:0036405)","synonyms":[{"name":"anchored to cell outer membrane","type":"narrow"}],"termid":"GO:0036405"}


id: GO:0110025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The 5' to 3' exonucleolytic resection of DNA at the site of a stalled replication fork that contributes to replication fork processing.","definition_xrefs":["PMID:28475874","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"replication fork processing","termid":"GO:0031297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"DNA strand resection involved in replication fork processing","termid":"GO:0110025"}


id: PBO:0040969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 40","termid":"PBO:0040969"}


id: PBO:0077058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THSD4 antisense RNA 1","termid":"PBO:0077058"}


id: PBO:0001151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Cmk1","termid":"PBO:0001151"}


id: MONDO:0019359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rocky Mountain spotted fever refers to an infection caused by the bacterium Rickettsia rickettsia. This particular bacterium is carried by certain species of ticks and spread to humans through the bites of infected ticks. Signs and symptoms of the condition generally develop approximately 2 to 14 days following the tick bite and may include fever, rash, headache, muscle pain, chills, and/or confusion. Some affected people may also experience diarrhea, nausea, vomiting, light sensitivity, hallucinations, and/or excessive thirst. Most cases occur in the spring and summer and are found in children. Risk factors for developing the conditioninclude recent hiking or exposure to ticks in an area where the disease is known to occur. Rocky Mountain spotted fever is typically treated with antibiotics (such as doxycycline or tetracycline).","direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rocky mountain spotted fever","secondary_identifiers":["SCTID:186772009","ICD10CM:A77.0","MedDRA:10039207","icd11.foundation:215936800","MEDGEN:48500","UMLS:C0035793","NCIT:C128410","DOID:0050052","GARD:7585","MESH:D012373","Orphanet:83311","NORD:1674"],"synonyms":[{"name":"Brazilian spotted","type":"related"},{"name":"Choix","type":"related"},{"name":"Fiebre maculosa","type":"related"},{"name":"Fiebre manchada","type":"related"},{"name":"RMSF","type":"related"},{"name":"So Paulo fever","type":"related"},{"name":"Tick typhus","type":"related"},{"name":"Tobia fever","type":"related"},{"name":"exanthematic typhus of sao Paulo","type":"related"},{"name":"sao Paulo typhus","type":"related"}],"termid":"MONDO:0019359","xrefs":{"Monarch":{"xref_id":"0019359"}}}


id: PATO:0001736
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue of the bearer's parts having the arrangement which exhibits characteristics of solids.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quality of a solid","termid":"PATO:0001546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solid configuration","synonyms":[{"name":"solid","type":"exact"}],"termid":"PATO:0001736"}


id: PBO:0117082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLXNA4 antisense RNA 2","termid":"PBO:0117082"}


id: PBO:0048183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 associated binding protein family member 4","termid":"PBO:0048183"}


id: PBO:0005670
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.12","termid":"PBO:0005670"}


id: PBO:0045122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family C2","termid":"PBO:0045122"}


id: GO:0141091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a member of the transforming growth factor receptor superfamily, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:22651914","PMID:28096268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein serine/threonine kinase signaling pathway","termid":"GO:0007178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"transforming growth factor beta receptor superfamily signaling pathway","synonyms":[{"name":"TGF-beta receptor superfamily signaling pathway","type":"exact"},{"name":"TGF-beta receptor superfamily signalling pathway","type":"exact"},{"name":"TGFbeta receptor superfamily signaling pathway","type":"exact"},{"name":"TGFbeta receptor superfamily signalling pathway","type":"exact"},{"name":"transforming growth factor beta receptor superfamily signalling pathway","type":"exact"}],"termid":"GO:0141091"}


id: GO:0140152
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Main components of the interstitial matrix solid phase, including fibrillar and fibril-associated collagens.","definition_xrefs":["PMID:28101870","PMID:39223427","PMID:12064927","PMID:21421911","PMID:17550969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"external encapsulating structure","termid":"GO:0030312"},{"relation_name":"part_of","term_name":"solid phase of interstitial matrix","termid":"GO:0140151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"collagenous component of interstitial matrix","termid":"GO:0140152"}


id: MONDO:0004492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory process affecting the mediastinum.","definition_xrefs":["NCIT:C26827"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"connective tissue disorder","termid":"MONDO:0003900"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediastinitis","secondary_identifiers":["ICD9:519.2","icd11.foundation:1612791605","MESH:D008480","MEDGEN:9921","UMLS:C0025064","ICD10CM:J98.51","DOID:819","SCTID:47597000"],"termid":"MONDO:0004492","xrefs":{"Monarch":{"xref_id":"0004492"}}}


id: GO:0052734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: shikimate + NAD+ = 3-dehydroshikimate + NADH + H+.","definition_xrefs":["RHEA:17741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"shikimate 3-dehydrogenase (NAD+) activity","secondary_identifiers":["KEGG_REACTION:R06847"],"synonyms":[{"name":"3-dehydroshikimate reductase activity","type":"related"},{"name":"3-dehydroshikimic reductase activity","type":"related"},{"name":"DHS reductase activity","type":"broad"},{"name":"dehydroshikimic reductase activity","type":"broad"},{"name":"shikimate oxidoreductase activity","type":"broad"},{"name":"shikimate:NAD(P)(+) 3-oxidoreductase activity","type":"related"},{"name":"shikimate:NAD(P)(+) oxidoreductase activity","type":"broad"}],"termid":"GO:0052734"}


id: PBO:0043706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX6A1 pseudogene 3","termid":"PBO:0043706"}


id: FYPO:0004629
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitotic DNA replication is normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA replication","termid":"FYPO:0001133"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle process","termid":"FYPO:0002741"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic DNA replication","synonyms":[{"name":"normal DNA replication during mitotic cell cycle","type":"exact"},{"name":"normal DNA replication during vegetative growth","type":"exact"}],"termid":"FYPO:0004629"}


id: PBO:0074772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3E","termid":"PBO:0074772"}


id: PBO:0041767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 7","termid":"PBO:0041767"}


id: GO:0032837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which genetic material, in the form of chromosomes, is organized and then physically separated and apportioned to two or more sets during a normally chiasmate meiosis under the condition that chiasma have not occurred between a particular pair of homologs. Distributive segregation is a backup mechanism to ensure the segregation of homologs that have failed to cross over - either as a consequence of mutation or not, as, for example, the 4th chromosome of Drosophila melanogaster (which never exchanges, presumably due to its small size) - but nevertheless segregate normally.","definition_xrefs":["GOC:ma","GOC:expert_rsh","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic chromosome segregation","termid":"GO:0045132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"distributive segregation","termid":"GO:0032837"}


id: PBO:0035815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_acetylation_during_vegetative_growth","termid":"PBO:0035815"}


id: GO:0014857
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of skeletal muscle cell proliferation.","definition_xrefs":["CL:0000188","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"skeletal muscle cell proliferation","termid":"GO:0014856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of skeletal muscle cell proliferation","termid":"GO:0014857"}


id: PBO:0074536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA I","termid":"PBO:0074536"}


id: PBO:0044192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin A","termid":"PBO:0044192"}


id: PBO:0003909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type M-specific polypeptide Mi 2","termid":"PBO:0003909"}


id: PBO:0046949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A3","termid":"PBO:0046949"}


id: PBO:0051949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPKB antisense RNA 1","termid":"PBO:0051949"}


id: PBO:0087883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose","termid":"PBO:0087883"}


id: PBO:0120978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3155","termid":"PBO:0120978"}


id: PBO:0057424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR548X host gene","termid":"PBO:0057424"}


id: PBO:0026802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_meiotic_recombination_double-strand_break_repair","termid":"PBO:0026802"}


id: PBO:0053743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 970","termid":"PBO:0053743"}


id: MONDO:0020684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, periodontitis type","termid":"MONDO:0007527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, periodontal type 1","secondary_identifiers":["MEDGEN:1642148","DOID:0080986","OMIM:130080","UMLS:C4551499"],"synonyms":[{"name":"EDS 8","type":"related"},{"name":"EDSPD1","type":"related"},{"name":"Ehlers-Danlos syndrome, periodontal type, 1","type":"related"},{"name":"Ehlers-Danlos syndrome, periodontitis type","type":"related"},{"name":"Ehlers-Danlos syndrome, periodontosis type","type":"related"},{"name":"Ehlers-Danlos syndrome, type 8","type":"related"}],"termid":"MONDO:0020684","xrefs":{"Monarch":{"xref_id":"0020684"}}}


id: PBO:0074036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A21 antisense RNA 1","termid":"PBO:0074036"}


id: PBO:0031603
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_S_phase","termid":"PBO:0031603"}


id: PR:P41836
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 26S protease regulatory subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03141","PANTHER:PTHR23073:SF12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"26S protease regulatory subunit 8 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.12c","secondary_identifiers":["UniProtKB:P41836"],"synonyms":[{"name":"Spom972h-PSMC5","type":"exact"},{"name":"protein let1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41836"}


id: PBO:0075060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-23","termid":"PBO:0075060"}


id: MOD:01460
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"alpha-amino methylated residue","synonyms":[{"name":"N2MeRes","type":"exact"}],"termid":"MOD:01460"}


id: PBO:0013842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tea1-interacting protein involved in exocytosis","termid":"PBO:0013842"}


id: MONDO:0014756
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any essential tremor in which the cause of the disease is a mutation in the TENM4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 5","secondary_identifiers":["DOID:0111432","OMIM:616736","UMLS:C4225223","MEDGEN:897748"],"synonyms":[{"name":"ETM5","type":"exact"},{"name":"TENM4 essential tremor","type":"exact"},{"name":"essential tremor caused by mutation in TENM4","type":"exact"},{"name":"essential tremor, hereditary, 5","type":"exact"},{"name":"tremor, hereditary essential, 5","type":"exact"},{"name":"tremor, hereditary essential, 5; ETM5","type":"exact"},{"name":"tremor, hereditary essential, type 5","type":"exact"}],"termid":"MONDO:0014756","xrefs":{"Monarch":{"xref_id":"0014756"}}}


id: PBO:0042198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin E2","termid":"PBO:0042198"}


id: GO:0046056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dADP, deoxyadenosine diphosphate (2'-deoxyadenosine 5'-diphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside diphosphate metabolic process","termid":"GO:0009182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"dADP metabolic process","synonyms":[{"name":"dADP metabolism","type":"exact"}],"termid":"GO:0046056"}


id: PBO:0068613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 64, pseudogene","termid":"PBO:0068613"}


id: PBO:0029204
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_interkinetochore_distance_before_mitotic_anaphase","termid":"PBO:0029204"}


id: GO:0009167
data:
  {"annotated_genes":["SJAG_01298","SJAG_04849","SJAG_01814","SJAG_01070","SJAG_02038","SJAG_01661","SJAG_04634","SJAG_04123","SJAG_01081","SJAG_02364","SJAG_03140","SJAG_01859","SJAG_04681","SJAG_06634","SJAG_00964","SJAG_02850","SJAG_00044","SJAG_03355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80903,78932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[73548,60793,58584,65666,78708,67024,57449,71877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[78349,60067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046033"},{"annotations":[57600,75892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[64139,60086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[65593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046037"},{"annotations":[77590,103215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[80904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046040"},{"annotations":[77591,66177],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[77592,110312],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine ribonucleoside monophosphate, a compound consisting of a purine base linked to a ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_00964":null,"SJAG_01070":null,"SJAG_01081":null,"SJAG_01298":null,"SJAG_01661":null,"SJAG_01814":null,"SJAG_01859":null,"SJAG_02038":null,"SJAG_02364":null,"SJAG_02850":null,"SJAG_03140":null,"SJAG_03355":null,"SJAG_04123":null,"SJAG_04634":null,"SJAG_04681":null,"SJAG_04849":null,"SJAG_06634":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"purine ribonucleoside monophosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"purine ribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009167","terms_by_termid":{"GO:0006177":null,"GO:0006189":null,"GO:0032263":null,"GO:0032264":null,"GO:0032265":null,"GO:0044208":null,"GO:0044209":null,"GO:0046033":null,"GO:0046037":null,"GO:0046040":null}}


id: PBO:0055823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LRAT domain containing 1","termid":"PBO:0055823"}


id: MONDO:1010015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypertrophic cardiomyopathy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertrophic cardiomyopathy, non-human animal","secondary_identifiers":["OMIA:000515"],"termid":"MONDO:1010015","xrefs":{"Monarch":{"xref_id":"1010015"}}}


id: PBO:0029487
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_phosphatidylethanolamine_level","termid":"PBO:0029487"}


id: GO:0043134
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of muscle contraction of the hindgut, the posterior part of the alimentary canal, including the rectum, and the large intestine.","definition_xrefs":["GOC:jl","UBERON:0001046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smooth muscle contraction","termid":"GO:0006940"},{"relation_name":"is_a","term_name":"regulation of digestive system process","termid":"GO:0044058"},{"relation_name":"regulates","term_name":"hindgut contraction","termid":"GO:0043133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hindgut contraction","termid":"GO:0043134"}


id: FYPO:0004752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phleomycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"resistance to phleomycin","synonyms":[{"name":"resistance to phleomycin during mitotic cell cycle","type":"related"},{"name":"resistance to phleomycin during vegetative growth","type":"exact"},{"name":"resistant to phleomycin","type":"exact"}],"termid":"FYPO:0004752"}


id: GO:0015980
data:
  {"annotated_genes":["SJAG_MIT09","SJAG_00605","SJAG_02107","SJAG_01414","SJAG_MIT15","SJAG_MIT13","SJAG_01539","SJAG_01490","SJAG_00542","SJAG_01062","SJAG_02504","SJAG_03851","SJAG_03490","SJAG_01376","SJAG_04152","SJAG_07006","SJAG_02006","SJAG_01753","SJAG_03588","SJAG_00963","SJAG_03163","SJAG_05006","SJAG_03442","SJAG_06309","SJAG_02158","SJAG_00915","SJAG_01561","SJAG_MIT04","SJAG_01402","SJAG_06622","SJAG_03964","SJAG_00976","SJAG_07007","SJAG_07003","SJAG_00836","SJAG_05204","SJAG_00240","SJAG_06621","SJAG_04192","SJAG_04843","SJAG_03828","SJAG_02744","SJAG_00115","SJAG_03822","SJAG_02178","SJAG_MIT03","SJAG_MIT37","SJAG_00438","SJAG_01319","SJAG_00985","SJAG_01355","SJAG_01080","SJAG_03743","SJAG_04048","SJAG_02009","SJAG_02598","SJAG_00461","SJAG_03660","SJAG_00260","SJAG_02076","SJAG_02646","SJAG_02945","SJAG_01190","SJAG_03373","SJAG_02105","SJAG_01089","SJAG_01310","SJAG_05629","SJAG_03310","SJAG_03290","SJAG_03064","SJAG_04334","SJAG_03114","SJAG_03370","SJAG_00698","SJAG_01763","SJAG_00755","SJAG_00133","SJAG_06382","SJAG_02135","SJAG_02398","SJAG_02564","SJAG_01630","SJAG_01524","SJAG_04495","SJAG_00601","SJAG_03925","SJAG_00570","SJAG_02464","SJAG_02369","SJAG_03813","SJAG_01895","SJAG_00866","SJAG_00027","SJAG_MIT20","SJAG_03903","SJAG_02734","SJAG_00132","SJAG_00839","SJAG_02796","SJAG_04963","SJAG_01077","SJAG_03920","SJAG_04842","SJAG_01671","SJAG_00080","SJAG_04122","SJAG_01783","SJAG_02433","SJAG_02592","SJAG_01922"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96536,105655,111437,111438,107479,79788,111442,107850,100004,111436,74386,107849,107481,111439,111440,105398,100275,111441,107480,118409],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061621"},{"annotations":[113841,97798,116571,108707,91111,117912],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006112"},{"annotations":[99269,99268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006113"},{"annotations":[105320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[74506,82116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005977"},{"annotations":[100744,100743,90517,116671,116672],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[90617],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0061613"},{"annotations":[75057,75349,81804,80793,74036,73776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[76204,80824,116288,110324,73792,78398,117520,62775,121113,121135,121165],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006123"},{"annotations":[98730,114914],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006120"},{"annotations":[118817,91194,115252,90823],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006121"},{"annotations":[75715,121140,62741,106093,78397,119751,74129,77634,77716,115459],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0006122"},{"annotations":[80963,79044],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045719"},{"annotations":[98586],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[96859,121152,105667,103837,109845,105693,91138,95880,109937,95289,105053,121158,110828,121146,107040,117906,94863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042776"},{"annotations":[75298,76558,81045,89864,101041,89427,74663],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006086"},{"annotations":[96385,113935,111736,99636],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903715"},{"annotations":[72185,62425,108769,76364,63744,77781,77285,73711,75106,65703,81229,72697,67991,78760,76057],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways by which a cell derives energy from organic compounds; results in the oxidation of the compounds from which energy is released.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"generation of precursor metabolites and energy","termid":"GO:0006091"}],"gene_count":111,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00080":null,"SJAG_00115":null,"SJAG_00132":null,"SJAG_00133":null,"SJAG_00240":null,"SJAG_00260":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00570":null,"SJAG_00601":null,"SJAG_00605":null,"SJAG_00698":null,"SJAG_00755":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_00915":null,"SJAG_00963":null,"SJAG_00976":null,"SJAG_00985":null,"SJAG_01062":null,"SJAG_01077":null,"SJAG_01080":null,"SJAG_01089":null,"SJAG_01190":null,"SJAG_01310":null,"SJAG_01319":null,"SJAG_01355":null,"SJAG_01376":null,"SJAG_01402":null,"SJAG_01414":null,"SJAG_01490":null,"SJAG_01524":null,"SJAG_01539":null,"SJAG_01561":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01763":null,"SJAG_01783":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02006":null,"SJAG_02009":null,"SJAG_02076":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02158":null,"SJAG_02178":null,"SJAG_02369":null,"SJAG_02398":null,"SJAG_02433":null,"SJAG_02464":null,"SJAG_02504":null,"SJAG_02564":null,"SJAG_02592":null,"SJAG_02598":null,"SJAG_02646":null,"SJAG_02734":null,"SJAG_02744":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03064":null,"SJAG_03114":null,"SJAG_03163":null,"SJAG_03290":null,"SJAG_03310":null,"SJAG_03370":null,"SJAG_03373":null,"SJAG_03442":null,"SJAG_03490":null,"SJAG_03588":null,"SJAG_03660":null,"SJAG_03743":null,"SJAG_03813":null,"SJAG_03822":null,"SJAG_03828":null,"SJAG_03851":null,"SJAG_03903":null,"SJAG_03920":null,"SJAG_03925":null,"SJAG_03964":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04152":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04842":null,"SJAG_04843":null,"SJAG_04963":null,"SJAG_05006":null,"SJAG_05204":null,"SJAG_05629":null,"SJAG_06309":null,"SJAG_06382":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_07006":null,"SJAG_07007":null,"SJAG_MIT03":null,"SJAG_MIT04":null,"SJAG_MIT09":null,"SJAG_MIT13":null,"SJAG_MIT15":null,"SJAG_MIT20":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"energy derivation by oxidation of organic compounds","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"chemoorganotrophy","type":"exact"}],"termid":"GO:0015980","terms_by_termid":{"GO:0005977":null,"GO:0005980":null,"GO:0006086":null,"GO:0006099":null,"GO:0006112":null,"GO:0006113":null,"GO:0006120":null,"GO:0006121":null,"GO:0006122":null,"GO:0006123":null,"GO:0019655":null,"GO:0042776":null,"GO:0045719":null,"GO:0061613":null,"GO:0061621":null,"GO:0061723":null,"GO:1903715":null,"GO:2001172":null}}


id: PBO:0064569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP7 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064569"}


id: PBO:0069581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 855, pseudogene","termid":"PBO:0069581"}


id: PR:Q9P7J1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swt1 gene.","definition_xrefs":["UniProtKB:Q9P7J1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional protein swt1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC24B10.15","synonyms":[{"name":"Spom972h-swt1","type":"exact"}],"termid":"PR:Q9P7J1"}


id: PATO:0001739
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that inheres in an bearer by virtue of how that bearer interacts with radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation quality","termid":"PATO:0001739"}


id: PBO:0081362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 197","termid":"PBO:0081362"}


id: GO:0048447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the sepal are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ morphogenesis","termid":"GO:0048444"},{"relation_name":"part_of","term_name":"sepal development","termid":"GO:0048442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sepal morphogenesis","secondary_identifiers":["GO:0048422"],"termid":"GO:0048447"}


id: PBO:0066552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 16","termid":"PBO:0066552"}


id: GO:0018780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: dichloroacetate + H2O = 2 HCl + glyoxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dichloroacetate halidohydrolase activity (obsolete GO:0018780)","termid":"GO:0018780"}


id: GO:0000184
data:
  {"annotated_genes":["SJAG_04360","SJAG_01720","SJAG_01521","SJAG_05276","SJAG_03886","SJAG_04153","SJAG_04824","SJAG_00854","SJAG_01252","SJAG_03805","SJAG_04056","SJAG_01818","SJAG_04818","SJAG_01830","SJAG_00507","SJAG_03223","SJAG_05014","SJAG_03179","SJAG_00226","SJAG_04006","SJAG_04321","SJAG_04084","SJAG_01218","SJAG_04118"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71860,75267,91913,106782,107918,115639,117436],"is_not":false,"summary":null,"term":"GO:0000184"},{"annotations":[93534,91810,120386,99255,103257,90761,118209,109497,104102,117948,97930,95088,106421,107291,110868,77356,108500],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070478"}]},"cv_name":"biological_process","definition":"The nonsense-mediated decay pathway for nuclear-transcribed mRNAs degrades mRNAs in which an amino-acid codon has changed to a nonsense codon; this prevents the translation of such mRNAs into truncated, and potentially harmful, proteins.","definition_xrefs":["PMID:10025395","GOC:krc","GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear-transcribed mRNA catabolic process","termid":"GO:0000956"}],"gene_count":24,"genes_by_uniquename":{"SJAG_00226":null,"SJAG_00507":null,"SJAG_00854":null,"SJAG_01218":null,"SJAG_01252":null,"SJAG_01521":null,"SJAG_01720":null,"SJAG_01818":null,"SJAG_01830":null,"SJAG_03179":null,"SJAG_03223":null,"SJAG_03805":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04056":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04360":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05014":null,"SJAG_05276":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0016071","GO:0008150"],"is_obsolete":false,"name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-927802","Wikipedia:Nonsense-mediated_mRNA_decay","Wikipedia:Nonsense-mediated_decay"],"synonyms":[{"name":"mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"nonsense-mediated mRNA decay","type":"exact"},{"name":"nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:0000184","terms_by_termid":{"GO:0000184":null,"GO:0070478":null}}


id: SO:0000080
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of an operon, which is a set of genes transcribed together as a unit.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_array_member","termid":"SO:0000081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"operon_member","synonyms":[{"name":"operon member","type":"exact"}],"termid":"SO:0000080"}


id: PBO:0072413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 18","termid":"PBO:0072413"}


id: PBO:0003262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc25 family phosphatase Ibp1","termid":"PBO:0003262"}


id: PBO:0068671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 52, pseudogene","termid":"PBO:0068671"}


id: PBO:0068635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 15, pseudogene","termid":"PBO:0068635"}


id: GO:0071909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the asymmetric location of the stomach with respect to the left and right halves of the organism.","definition_xrefs":["GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"determination of digestive tract left/right asymmetry","termid":"GO:0071907"},{"relation_name":"part_of","term_name":"stomach development","termid":"GO:0062094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of stomach left/right asymmetry","termid":"GO:0071909"}


id: PBO:0065927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rac family small GTPase 1 pseudogene 1","termid":"PBO:0065927"}


id: PATO:0001496
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reproductive quality inhering in the young of an animal by virtue of the bearer's being cared for at one time.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive quality","termid":"PATO:0001434"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brood quality","termid":"PATO:0001496"}


id: PBO:0047403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 41","termid":"PBO:0047403"}


id: GO:0043354
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for an enucleate erythrocyte to attain its fully functional state. An enucleate erythrocyte is an erythrocyte without a nucleus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"erythrocyte maturation","termid":"GO:0043249"},{"relation_name":"part_of","term_name":"enucleate erythrocyte development","termid":"GO:0048822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleate erythrocyte maturation","synonyms":[{"name":"enucleate RBC maturation","type":"exact"},{"name":"enucleate red blood cell maturation","type":"exact"}],"termid":"GO:0043354"}


id: PBO:0054518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1918","termid":"PBO:0054518"}


id: PBO:0061926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily I member 1","termid":"PBO:0061926"}


id: PBO:0081057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 14","termid":"PBO:0081057"}


id: PBO:0039004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALF transcription elongation factor 1","termid":"PBO:0039004"}


id: PBO:0041706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin 2 pseudogene 1","termid":"PBO:0041706"}


id: MONDO:1012528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"unilateral deafness and vestibular dysfunction, non-human animal","termid":"MONDO:1011711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unilateral deafness and vestibular dysfunction, dog","secondary_identifiers":["OMIA:002196-9615"],"termid":"MONDO:1012528","xrefs":{"Monarch":{"xref_id":"1012528"}}}


id: PR:Q9UUC8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 39S ribosomal protein L43, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02962","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"54S ribosomal protein L51, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.12","secondary_identifiers":["UniProtKB:Q9UUC8"],"synonyms":[{"name":"Spom972h-MRPL43","type":"exact"}],"termid":"PR:Q9UUC8"}


id: PBO:0065058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline and arginine rich end leucine rich repeat protein","termid":"PBO:0065058"}


id: MONDO:0004888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary choroidal atrophy","termid":"MONDO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"partial circumpapillary choroid dystrophy","secondary_identifiers":["ICD9:363.51","DOID:9811","MEDGEN:509704","SCTID:193466003","UMLS:C0154895"],"termid":"MONDO:0004888","xrefs":{"Monarch":{"xref_id":"0004888"}}}


id: PBO:0000639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf4 (predicted)","termid":"PBO:0000639"}


id: PBO:0000355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidotransferase (predicted)","termid":"PBO:0000355"}


id: PBO:0042111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCDC183 antisense RNA 1","termid":"PBO:0042111"}


id: MONDO:0020836
data:
  {"annotated_genes":["SJAG_04616","SJAG_04176","SJAG_00507","SJAG_03223"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013258"},{"annotations":[89290,89291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014041"},{"annotations":[89356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010449"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00507":null,"SJAG_03223":null,"SJAG_04176":null,"SJAG_04616":null},"genotype_count":0,"is_obsolete":false,"name":"autism, susceptiblity to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:209850"],"termid":"MONDO:0020836","terms_by_termid":{"MONDO:0010449":null,"MONDO:0013258":null,"MONDO:0014041":null},"xrefs":{"Monarch":{"xref_id":"0020836"}}}


id: GO:0052235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a lower concentration of environmental oxygen within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative aerotaxis in other organism involved in symbiotic interaction (obsolete GO:0052235)","synonyms":[{"name":"negative aerotaxis in other organism during symbiotic interaction","type":"related"},{"name":"negative aerotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052235"}


id: MONDO:0035647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"childhood-onset Steinert myotonic dystrophy","secondary_identifiers":["UMLS:C5680307","MEDGEN:1842487","GARD:22362","ICD10CM:G71.1","Orphanet:589824"],"synonyms":[{"name":"Childhood-onset Steinert disease","type":"exact"},{"name":"Childhood-onset myotonic dystrophy type 1","type":"exact"}],"termid":"MONDO:0035647","xrefs":{"Monarch":{"xref_id":"0035647"}}}


id: GO:0036266
data:
  {"annotated_genes":["SJAG_01134","SJAG_00948","SJAG_03345"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[91259,106837,117829],"is_not":false,"summary":null,"term":"GO:0036266"}]},"cv_name":"cellular_component","definition":"A multiprotein ATPase complex involved in the release of polyubiquitinated proteins, including those damaged by oxidative stress, from the outer mitochondria membrane into the cytoplasm where they are presented to the proteasome for proteolysis, a process also referred to as mitochondria-associated degradation (MAD). In budding yeast, this complex includes Cdc48p, Npl4p and Vms1p.","definition_xrefs":["GOC:rn","PMID:21070972","PMID:21936843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"outer mitochondrial membrane protein complex","termid":"GO:0098799"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00948":null,"SJAG_01134":null,"SJAG_03345":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739","GO:0032991"],"is_obsolete":false,"name":"Cdc48p-Npl4p-Vms1p AAA ATPase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cdc48p-Npl4p-Vms1p complex","type":"exact"},{"name":"Vms1-Cdc48-Npl4 complex","type":"exact"},{"name":"Vms1p-Cdc48p-Npl4p complex","type":"exact"}],"termid":"GO:0036266","terms_by_termid":{"GO:0036266":null}}


id: PBO:0077179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toll like receptor 3","termid":"PBO:0077179"}


id: PR:O60167
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- yap18 gene.","definition_xrefs":["UniProtKB:O60167","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ENTH domain-containing protein C19F8.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.03c","synonyms":[{"name":"Spom972h-yap18","type":"exact"}],"termid":"PR:O60167"}


id: PBO:0040832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIRC6 antisense RNA 2","termid":"PBO:0040832"}


id: PBO:0058985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT6, PHD finger containing","termid":"PBO:0058985"}


id: PBO:0002693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor Rtf1","termid":"PBO:0002693"}


id: PBO:0005758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Swc5","termid":"PBO:0005758"}


id: GO:1900156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of bone trabecula formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of bone trabecula formation","termid":"GO:1900154"},{"relation_name":"positively_regulates","term_name":"bone trabecula formation","termid":"GO:0060346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of bone trabecula formation","synonyms":[{"name":"activation of bone trabecula biogenesis","type":"related"},{"name":"activation of bone trabecula formation","type":"narrow"},{"name":"activation of bone trabeculation","type":"narrow"},{"name":"activation of skeletal trabecula biogenesis","type":"related"},{"name":"activation of skeletal trabecula formation","type":"narrow"},{"name":"activation of skeletal trabeculation","type":"narrow"},{"name":"positive regulation of bone trabecula biogenesis","type":"related"},{"name":"positive regulation of bone trabeculation","type":"exact"},{"name":"positive regulation of skeletal trabecula biogenesis","type":"related"},{"name":"positive regulation of skeletal trabecula formation","type":"exact"},{"name":"positive regulation of skeletal trabeculation","type":"exact"},{"name":"up regulation of bone trabecula biogenesis","type":"related"},{"name":"up regulation of bone trabecula formation","type":"exact"},{"name":"up regulation of bone trabeculation","type":"exact"},{"name":"up regulation of skeletal trabecula biogenesis","type":"related"},{"name":"up regulation of skeletal trabecula formation","type":"exact"},{"name":"up regulation of skeletal trabeculation","type":"exact"},{"name":"up-regulation of bone trabecula biogenesis","type":"related"},{"name":"up-regulation of bone trabecula formation","type":"exact"},{"name":"up-regulation of bone trabeculation","type":"exact"},{"name":"up-regulation of skeletal trabecula biogenesis","type":"related"},{"name":"up-regulation of skeletal trabecula formation","type":"exact"},{"name":"up-regulation of skeletal trabeculation","type":"exact"},{"name":"upregulation of bone trabecula biogenesis","type":"related"},{"name":"upregulation of bone trabecula formation","type":"exact"},{"name":"upregulation of bone trabeculation","type":"exact"},{"name":"upregulation of skeletal trabecula biogenesis","type":"related"},{"name":"upregulation of skeletal trabecula formation","type":"exact"},{"name":"upregulation of skeletal trabeculation","type":"exact"}],"termid":"GO:1900156"}


id: GO:2000277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative phosphorylation uncoupler activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transmembrane transporter activity","termid":"GO:0022898"},{"relation_name":"is_a","term_name":"positive regulation of transporter activity","termid":"GO:0032411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of oxidative phosphorylation uncoupler activity","synonyms":[{"name":"positive regulation of mitochondrial uncoupling protein activity","type":"related"},{"name":"positive regulation of uncoupling protein activity","type":"related"}],"termid":"GO:2000277"}


id: PBO:0063149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAT1 homolog 2","termid":"PBO:0063149"}


id: GO:0006847
data:
  {"annotated_genes":["SJAG_01505"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100710],"is_not":false,"summary":null,"term":"GO:0006847"}]},"cv_name":"biological_process","definition":"The directed movement of acetate across a plasma membrane.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetate transmembrane transport","termid":"GO:0035433"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01505":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"plasma membrane acetate transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006847","terms_by_termid":{"GO:0006847":null}}


id: GO:2000946
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amylopectin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of starch catabolic process","termid":"GO:2000882"},{"relation_name":"is_a","term_name":"regulation of amylopectin catabolic process","termid":"GO:2000945"},{"relation_name":"negatively_regulates","term_name":"amylopectin catabolic process","termid":"GO:2000897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"negatively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"negative regulation of amylopectin catabolic process","synonyms":[{"name":"negative regulation of Amylopectin catabolism","type":"exact"}],"termid":"GO:2000946"}


id: GO:0034202
data:
  {"annotated_genes":["SJAG_03774"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114615],"is_not":false,"summary":null,"term":"GO:0034202"}]},"cv_name":"molecular_function","definition":"Catalysis of the movement of a glycolipid from the cytosolic to the exoplasmic leaflet of a membrane, using energy from the hydrolysis of ATP.","definition_xrefs":["GOC:krc","PMID:11807558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floppase activity","termid":"GO:0140328"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03774":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0140303"],"is_obsolete":false,"name":"glycolipid floppase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-446212","Reactome:R-HSA-4570573"],"synonyms":[{"name":"ATP-dependent intramembrane glycolipid transporter activity","type":"broad"},{"name":"ATPase-coupled intramembrane glycolipid transporter activity","type":"broad"},{"name":"M5GN2-PP-Dol flippase activity","type":"narrow"},{"name":"Man(5)GlcNAc(2)-PP-dolichol translocator","type":"narrow"},{"name":"Man5GlcNac2-PP-Dol ER flippase activity","type":"narrow"},{"name":"glycolipid floppase activity (cytosolic to exoplasmic leaflet)","type":"exact"},{"name":"glycolipid-translocating activity","type":"broad"}],"termid":"GO:0034202","terms_by_termid":{"GO:0034202":null}}


id: GO:0003678
data:
  {"annotated_genes":["SJAG_01762","SJAG_03898","SJAG_02294","SJAG_03780","SJAG_03495","SJAG_02348","SJAG_04372","SJAG_00995","SJAG_05372","SJAG_02200","SJAG_05105","SJAG_06642","SJAG_02822","SJAG_01221","SJAG_04210","SJAG_05353","SJAG_04183","SJAG_01644","SJAG_04355","SJAG_02295","SJAG_01677","SJAG_05173","SJAG_03036","SJAG_01354","SJAG_03886","SJAG_03206","SJAG_00857","SJAG_02199","SJAG_02690","SJAG_00884","SJAG_06597","SJAG_04064"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73930,74880,78244,78782,91187],"is_not":false,"summary":null,"term":"GO:0003678"},{"annotations":[81390,115006,115005,76684,115007,115009,79607,116347,72317,113002,80047,72882,75356,79996,76711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043138"},{"annotations":[59434,78923,94186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043139"},{"annotations":[120262,80830,91815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036121"},{"annotations":[80828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061749"},{"annotations":[72885,79998,80050,81392],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009378"},{"annotations":[71883,109281,117345,111129],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990518"},{"annotations":[75396,114591,65108,76686,80521,75358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017116"}]},"cv_name":"molecular_function","definition":"Unwinding of a DNA helix, driven by ATP hydrolysis.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helicase activity","termid":"GO:0004386"},{"relation_name":"is_a","term_name":"ATP-dependent activity, acting on DNA","termid":"GO:0008094"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_00884":null,"SJAG_00995":null,"SJAG_01221":null,"SJAG_01354":null,"SJAG_01644":null,"SJAG_01677":null,"SJAG_01762":null,"SJAG_02199":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02295":null,"SJAG_02348":null,"SJAG_02690":null,"SJAG_02822":null,"SJAG_03036":null,"SJAG_03206":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_03886":null,"SJAG_03898":null,"SJAG_04064":null,"SJAG_04183":null,"SJAG_04210":null,"SJAG_04355":null,"SJAG_04372":null,"SJAG_05105":null,"SJAG_05173":null,"SJAG_05353":null,"SJAG_05372":null,"SJAG_06597":null,"SJAG_06642":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097","GO:0016853"],"is_obsolete":false,"name":"DNA helicase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003679","GO:0004003","Reactome:R-HSA-5693589","EC:3.6.4.12"],"synonyms":[{"name":"ATP-dependent DNA helicase activity","type":"exact"}],"termid":"GO:0003678","terms_by_termid":{"GO:0003678":null,"GO:0009378":null,"GO:0017116":null,"GO:0036121":null,"GO:0043138":null,"GO:0043139":null,"GO:0061749":null,"GO:1990518":null}}


id: PBO:0089098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coatomer gamma subunit Sec21","termid":"PBO:0089098"}


id: GO:0043384
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A receptor complex found on immature T cells consisting of a T cell receptor beta chain and the pre-TCR-alpha chain, along with additional signaling components including CD3 family members and additional signaling proteins.","definition_xrefs":["PMID:12220932","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"pre-T cell receptor complex","synonyms":[{"name":"pre-T lymphocyte receptor complex","type":"exact"},{"name":"pre-T-cell receptor complex","type":"exact"},{"name":"pre-T-lymphocyte receptor complex","type":"exact"},{"name":"pre-TCR complex","type":"exact"}],"termid":"GO:0043384"}


id: PBO:0059325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L57 pseudogene 10","termid":"PBO:0059325"}


id: MONDO:0005533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Particular variety of ulcerative colitis where only the left half of the colon is inflamed.","definition_xrefs":["EFO:0005623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ulcerative colitis","termid":"MONDO:0005101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"distal colitis","secondary_identifiers":["ICD9:558.9","MEDGEN:678582","SCTID:373639002","UMLS:C0860168","NANDO:1200451"],"synonyms":[{"name":"inflammation of left colon","type":"exact"},{"name":"left colon inflammation","type":"exact"}],"termid":"MONDO:0005533","xrefs":{"Monarch":{"xref_id":"0005533"}}}


id: SO:0001527
data:
  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id: RO:0002102
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a neuron and some structure its axon forms (chemical) synapses in.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_presynaptic_terminal_in","termid":"RO:0002113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"axon_synapses_in","termid":"RO:0002102"}


id: PBO:0055203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2628","termid":"PBO:0055203"}


id: GO:0075161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism stops, prevents, or reduces the frequency, rate or extent of its symbiont G-protein alpha subunit-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of G-protein alpha subunit-mediated signal transduction in response to host (obsolete GO:0075161)","synonyms":[{"name":"negative regulation of symbiont G-protein alpha subunit-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075161"}


id: PBO:0013108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ergothioneine biosynthesis protein Egt1","termid":"PBO:0013108"}


id: GO:1990132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The release of misfolded proteins that are being held by the chaperone heat shock protein (Hsp) and targeting them for destruction by the Ub-proteasome machinery.","definition_xrefs":["GOC:rb","PMID:23530227"],"gene_count":0,"genotype_count":0,"name":"obsolete release of misfolded protein from chaperone (obsolete GO:1990132)","synonyms":[{"name":"release of misfolded protein from chaperone","type":"exact"}],"termid":"GO:1990132"}


id: PBO:0057956
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3679","termid":"PBO:0057956"}


id: PBO:0034253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_parallelism_relationship_with","termid":"PBO:0034253"}


id: PBO:0050992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 88","termid":"PBO:0050992"}


id: PBO:0090977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39","termid":"PBO:0090977"}


id: PBO:0055635
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3074","termid":"PBO:0055635"}


id: PBO:0004860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribokinase (predicted)","termid":"PBO:0004860"}


id: GO:0039508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host receptor.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host receptor activity (obsolete GO:0039508)","synonyms":[{"name":"down-regulation by virus of host receptor activity","type":"exact"},{"name":"downregulation by virus of host receptor activity","type":"exact"},{"name":"inhibition by virus of host receptor activity","type":"narrow"},{"name":"negative regulation by virus of host receptor activity","type":"exact"},{"name":"suppression by virus of host receptor function","type":"exact"},{"name":"viral inhibition of host receptor","type":"exact"}],"termid":"GO:0039508"}


id: FYPO:0002837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of small interfering RNA transcripts derived from the centromere outer repeat region measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal centromeric outer repeat transcript level","termid":"FYPO:0002567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal centromeric outer repeat transcript-derived siRNA level","synonyms":[{"name":"normal accumulation of centromeric outer repeat transcript-derived siRNA","type":"related"},{"name":"normal accumulation of centromeric outer repeat transcript-derived siRNA during vegetative growth","type":"related"},{"name":"normal accumulation of siRNAs homologous to outer repeats","type":"related"},{"name":"normal centromeric outer repeat transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"normal centromeric outer repeat transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"normal level of siRNAs homologous to outer repeats","type":"exact"}],"termid":"FYPO:0002837"}


id: GO:1905290
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of CAMKK-AMPK signaling cascade.","definition_xrefs":["GO_REF:0000058","PMID:22128786","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of calcium-mediated signaling","termid":"GO:0050849"},{"relation_name":"is_a","term_name":"regulation of CAMKK-AMPK signaling cascade","termid":"GO:1905289"},{"relation_name":"negatively_regulates","term_name":"CAMKK-AMPK signaling cascade","termid":"GO:0061762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of CAMKK-AMPK signaling cascade","synonyms":[{"name":"down regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"down regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"down-regulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"down-regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"downregulation of CAMKK-AMPK signaling cascade","type":"exact"},{"name":"downregulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"inhibition of CAMKK-AMPK signaling cascade","type":"narrow"},{"name":"inhibition of stress-activated AMP-activated protein kinase signaling cascade","type":"related"},{"name":"negative regulation of stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:1905290"}


id: MONDO:0012024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CERKL gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"CERKL-related retinopathy","termid":"MONDO:0800401"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 26","secondary_identifiers":["ICD10CM:H35.5","GARD:10397","MESH:C564249","DOID:0110368","UMLS:C1842127","OMIM:608380","MEDGEN:333996"],"synonyms":[{"name":"CERKL retinitis pigmentosa","type":"exact"},{"name":"RP 26","type":"related"},{"name":"RP26","type":"exact"},{"name":"retinitis pigmentosa 26","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in CERKL","type":"exact"},{"name":"retinitis pigmentosa type 26","type":"exact"}],"termid":"MONDO:0012024","xrefs":{"Monarch":{"xref_id":"0012024"}}}


id: PBO:0055082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2500","termid":"PBO:0055082"}


id: PBO:0078770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 2-2","termid":"PBO:0078770"}


id: PBO:0039840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein 10","termid":"PBO:0039840"}


id: GO:0052828
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 3,4-bisphosphate + H2O = 1D-myo-inositol 3-phosphate + phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol bisphosphate phosphatase activity","termid":"GO:0016312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol-3,4-bisphosphate 4-phosphatase activity","secondary_identifiers":["RHEA:43388","Reactome:R-HSA-1855202"],"termid":"GO:0052828"}


id: GO:0120314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of oocyte karyosome formation, the chromosome organization process in which meiotic chromosomes in the oocyte nucleus cluster together to form a compact spherical structure called the karyosome.","definition_xrefs":["GOC:ha","PMID:33382409","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of oocyte karyosome formation","termid":"GO:0120313"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"oocyte karyosome formation","termid":"GO:0030717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of oocyte karyosome formation","termid":"GO:0120314"}


id: PBO:0038501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily C member 10","termid":"PBO:0038501"}


id: PBO:0062035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily T member 4","termid":"PBO:0062035"}


id: PBO:0035858
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H2A_phosphorylation_during_vegetative_growth","termid":"PBO:0035858"}


id: GO:0098830
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An endosome present in the presynapse that fuses with endocytic vesicles arising in the presynaptic endocytic zone. This organelle is believed to be involved in regeneration of synaptic vesicles.","definition_xrefs":["PMID:25939282","PMID:20200227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"},{"relation_name":"part_of","term_name":"presynapse","termid":"GO:0098793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005768","GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"presynaptic endosome","termid":"GO:0098830"}


id: PBO:0048980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain containing 3","termid":"PBO:0048980"}


id: PBO:0079536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uveal autoantigen with coiled-coil domains and ankyrin repeats","termid":"PBO:0079536"}


id: GO:0015920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lipopolysaccharides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A lipopolysaccharide is any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"},{"relation_name":"is_a","term_name":"carbohydrate derivative transport","termid":"GO:1901264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lipopolysaccharide transport","secondary_identifiers":["GO:0015921"],"synonyms":[{"name":"LPS export","type":"narrow"},{"name":"LPS transport","type":"exact"},{"name":"lipopolysaccharide export","type":"narrow"}],"termid":"GO:0015920"}


id: MONDO:0007062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, non-syndromic, terminal transverse limb reduction defect characterized by unilateral absence of the terminal portions of digits 2 to 5, with a mildly hypoplastic thumb and small nail remnants on the digital stumps. Metacarpal bones may be variably reduced.","definition_xrefs":["Orphanet:973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"adactylia, unilateral","secondary_identifiers":["MESH:C562417","UMLS:C0220660","OMIM:102650","MEDGEN:113098","GARD:377"],"synonyms":[{"name":"Adactyly of hand, unilateral","type":"exact"},{"name":"adactylia unilateral","type":"exact"},{"name":"adactylia, unilateral","type":"exact"},{"name":"congenital absence/hypoplasia of fingers excluding thumb, unilateral","type":"exact"},{"name":"digits 2-5 hypodactyly, unilateral","type":"exact"},{"name":"digits 2-5 oligodactyly, unilateral","type":"exact"},{"name":"terminal transverse defects of hand, unilateral","type":"related"}],"termid":"MONDO:0007062","xrefs":{"Monarch":{"xref_id":"0007062"}}}


id: GO:0060433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a bronchus from an initial condition to its mature state. This process begins with the formation of the bronchus and ends with the mature structure. The bronchus is the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory tube development","termid":"GO:0030323"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus development","termid":"GO:0060433"}


id: FYPO:0006106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at the central core of the centromeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished chromatin binding","termid":"FYPO:0001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"abolished chromatin binding at centromere central core","synonyms":[{"name":"chromatin binding at centromere central core abolished","type":"exact"}],"termid":"FYPO:0006106"}


id: PBO:0076856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TET2 antisense RNA 1","termid":"PBO:0076856"}


id: SO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2'-O-methylcytidine is a modified cytidine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_cytidine","termid":"SO:0001275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylcytidine","secondary_identifiers":["RNAMOD:022"],"synonyms":[{"name":"2'-O-methylcytidine","type":"exact"},{"name":"Cm","type":"exact"},{"name":"two prime O methylcytidine","type":"exact"}],"termid":"SO:0001283"}


id: PBO:0038824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 30","termid":"PBO:0038824"}


id: PBO:0055332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2760","termid":"PBO:0055332"}


id: GO:0065009
data:
  {"annotated_genes":["SJAG_03088","SJAG_04887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107179,97305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904530"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a molecular function, an elemental biological activity occurring at the molecular level, such as catalysis or binding.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological regulation","termid":"GO:0065007"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_04887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of molecular function","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of a molecular function","type":"exact"}],"termid":"GO:0065009","terms_by_termid":{"GO:1904530":null}}


id: PBO:0074151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member E1","termid":"PBO:0074151"}


id: MONDO:0008254
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet disorder, undefined","secondary_identifiers":["OMIM:173420","UMLS:C1868258","MEDGEN:401405","MESH:C566799"],"synonyms":[{"name":"platelet disorder, undefined","type":"exact"}],"termid":"MONDO:0008254","xrefs":{"Monarch":{"xref_id":"0008254"}}}


id: PBO:0066048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1 GTPase activating protein","termid":"PBO:0066048"}


id: FYPO:0002297
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches are localized throughout the cell cortex (rather than concentrated at the cell ends as in wild type cells) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:8834798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dispersed actin cortical patch localization during vegetative growth","termid":"FYPO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0004803"],"is_obsolete":false,"name":"dispersed actin cortical patch localization during mitotic interphase","synonyms":[{"name":"delocalised actin cortical patches during mitotic interphase","type":"exact"},{"name":"delocalized actin cortical patches during mitotic interphase","type":"exact"},{"name":"dispersed F-actin patch localization during mitotic interphase","type":"exact"},{"name":"dispersed actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"dispersed actin cortical patch localization during interphase of mitotic cell cycle","type":"related"},{"name":"dispersed actin cortical patch localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"dispersed actin cortical patch location during mitotic interphase","type":"related"},{"name":"dispersed actin patch localization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002297"}


id: PBO:0076206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 16","termid":"PBO:0076206"}


id: SO:0002183
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a sense overlap long non-coding RNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"lncRNA_gene","termid":"SO:0002127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sense_overlap_lncRNA_gene","synonyms":[{"name":"sense overlap lncRNA gene","type":"exact"},{"name":"sense overlap ncRNA gene","type":"exact"},{"name":"sense_overlap_lncRNA_gene","type":"exact"}],"termid":"SO:0002183"}


id: MONDO:1010933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary weakness, stiffness, trembling in cattle in which the cause of the disease in a variation in the MYBPC1 gene.","definition_xrefs":["PMID:26289121"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital increased muscular tonus, MYBPC1-related, cattle","secondary_identifiers":["OMIA:001978-9913"],"termid":"MONDO:1010933","xrefs":{"Monarch":{"xref_id":"1010933"}}}


id: PBO:0053096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3D","termid":"PBO:0053096"}


id: PBO:0087044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L20B; homologous to mammalian ribosomal protein L18A, no bacterial homolog; RPL20B has a paralog, RPL20A, that arose from the whole genome duplication","termid":"PBO:0087044"}


id: GO:0016993
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: precorrin-8X = hydrogenobyrinate.","definition_xrefs":["EC:5.4.99.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular acyltransferase activity","termid":"GO:0016867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"precorrin-8X methylmutase activity","secondary_identifiers":["MetaCyc:5.4.1.2-RXN","RHEA:22512"],"synonyms":[{"name":"HBA synthase activity","type":"related"},{"name":"hydrogenobyrinic acid-binding protein activity","type":"narrow"},{"name":"precorrin isomerase activity","type":"related"},{"name":"precorrin-8X 11,12-methylmutase activity","type":"exact"}],"termid":"GO:0016993"}


id: MONDO:0033044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome 13","secondary_identifiers":["UMLS:C4539714","MEDGEN:1627793","DOID:0080253","OMIM:617562","GARD:16236"],"synonyms":[{"name":"MKS13","type":"related"},{"name":"Meckel syndrome 13","type":"exact"},{"name":"Meckel syndrome, type 13","type":"exact"}],"termid":"MONDO:0033044","xrefs":{"Monarch":{"xref_id":"0033044"}}}


id: PBO:0049325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIA subunit 2","termid":"PBO:0049325"}


id: GO:0002036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of L-glutamate import into a cell.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid import across plasma membrane","termid":"GO:0010958"},{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"regulates","term_name":"L-glutamate import across plasma membrane","termid":"GO:0098712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of L-glutamate import across plasma membrane","secondary_identifiers":["GO:1900920"],"synonyms":[{"name":"regulation of L-glutamate import","type":"broad"},{"name":"regulation of L-glutamate transport","type":"broad"},{"name":"regulation of L-glutamate uptake","type":"exact"}],"termid":"GO:0002036"}


id: PBO:0051538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 5 receptor subunit alpha","termid":"PBO:0051538"}


id: GO:0031062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of methyl groups to histones.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone methylation (obsolete GO:0031062)","synonyms":[{"name":"activation of histone methylation","type":"narrow"},{"name":"stimulation of histone methylation","type":"narrow"},{"name":"up regulation of histone methylation","type":"exact"},{"name":"up-regulation of histone methylation","type":"exact"},{"name":"upregulation of histone methylation","type":"exact"}],"termid":"GO:0031062"}


id: MONDO:0022785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate cardiac defect ectrodactyly","termid":"MONDO:0022785","xrefs":{"Monarch":{"xref_id":"0022785"}}}


id: PBO:0060180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 1, cell surface associated","termid":"PBO:0060180"}


id: MONDO:0022113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central centrifugal cicatricial alopecia","secondary_identifiers":["OMIM:618352","SCTID:109441000119102","UMLS:C1274708","GARD:10826","MEDGEN:698033","ICD9:704.09"],"synonyms":[{"name":"CCCA","type":"related"},{"name":"CENTRAL CENTRIFUGAL CICATRICIAL ALOPECIA","type":"related"},{"name":"central centrifugal alopecia","type":"related"},{"name":"central centrifugal cicatricial alopecia","type":"exact"},{"name":"hot comb alopecia","type":"related"}],"termid":"MONDO:0022113","xrefs":{"Monarch":{"xref_id":"0022113"}}}


id: MONDO:0006476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma without evidence of differentiation arising from the gallbladder. The most common variant is the spindle and giant cell type which resembles a sarcoma.","definition_xrefs":["NCIT:C9167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"undifferentiated carcinoma","termid":"MONDO:0005617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated gallbladder carcinoma","secondary_identifiers":["MEDGEN:76010","EFO:1000604","UMLS:C0279653"],"synonyms":[{"name":"anaplastic carcinoma of gallbladder","type":"exact"},{"name":"anaplastic carcinoma of the gallbladder","type":"exact"},{"name":"anaplastic gallbladder carcinoma","type":"exact"},{"name":"gall bladder undifferentiated carcinoma","type":"exact"},{"name":"gallbladder undifferentiated carcinoma","type":"exact"},{"name":"undifferentiated carcinoma of gallbladder","type":"exact"},{"name":"undifferentiated carcinoma of the gallbladder","type":"exact"},{"name":"undifferentiated gallbladder cancer","type":"exact"},{"name":"undifferentiated gallbladder carcinoma","type":"exact"}],"termid":"MONDO:0006476","xrefs":{"Monarch":{"xref_id":"0006476"}}}


id: GO:0031158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the size of the aggregate formed during sorocarp formation.","definition_xrefs":["GOC:mtg_sensu","PMID:5002049","GOC:mah","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of aggregate size involved in sorocarp development","termid":"GO:0031157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of aggregate size involved in sorocarp development","synonyms":[{"name":"down regulation of aggregate size","type":"exact"},{"name":"down-regulation of aggregate size","type":"exact"},{"name":"downregulation of aggregate size","type":"exact"},{"name":"inhibition of aggregate size","type":"narrow"}],"termid":"GO:0031158"}


id: MOD:00673
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to a methylated asparagine, such as N4-methyl-L-asparagine, or N4,N4-dimethyl-L-asparagine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-asparagine residue","termid":"MOD:00903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated asparagine","synonyms":[{"name":"MeAsn","type":"exact"}],"termid":"MOD:00673"}


id: MONDO:0016486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-thalassemia (BT) major is a severe early-onset form of BT characterized by severe anemia requiring regular red blood cell transfusions.","definition_xrefs":["Orphanet:231214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-thalassemia HBB/LCRB","termid":"MONDO:0013517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"beta-thalassemia major","secondary_identifiers":["UMLS:C0002875","NCIT:C129699","ICD9:282.49","DOID:0080771","SCTID:26682008","MEDGEN:283","GARD:17162"],"synonyms":[{"name":"Beta thalassemia Major","type":"exact"},{"name":"Cooley anaemia","type":"exact"},{"name":"Cooley anemia","type":"exact"},{"name":"Cooley's Anaemia","type":"exact"},{"name":"Cooley's Anemia","type":"exact"},{"name":"Mediterranean anaemia","type":"exact"},{"name":"Mediterranean anemia","type":"exact"}],"termid":"MONDO:0016486","xrefs":{"Monarch":{"xref_id":"0016486"}}}


id: MONDO:0003095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare mucoepidermoid carcinoma of the larynx. It usually arises from the supraglottic area. Hoarseness and dysphagia are the presenting symptoms.","definition_xrefs":["NCIT:C9463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"},{"relation_name":"is_a","term_name":"mucoepidermoid carcinoma","termid":"MONDO:0003036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"laryngeal mucoepidermoid carcinoma","secondary_identifiers":["MEDGEN:272792","DOID:4688","UMLS:C1334373"],"synonyms":[{"name":"laryngeal mucoepidermoid carcinoma","type":"exact"},{"name":"laryngeal throat mucoepidermoid cancer","type":"exact"},{"name":"larynx mucoepidermoid carcinoma","type":"exact"},{"name":"mucoepidermoid carcinoma of larynx","type":"exact"},{"name":"mucoepidermoid carcinoma of the larynx","type":"exact"}],"termid":"MONDO:0003095","xrefs":{"Monarch":{"xref_id":"0003095"}}}


id: FYPO:0007137
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell has an abnormally low volume and contains more than one nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005"],"is_obsolete":false,"name":"small multinucleate vegetative cell","synonyms":[{"name":"small multinucleate cell during vegetative growth","type":"exact"},{"name":"small multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007137"}


id: GO:0072576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the liver are generated and organized.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"liver development","termid":"GO:0001889"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"liver morphogenesis","termid":"GO:0072576"}


id: PBO:0048076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 27","termid":"PBO:0048076"}


id: MOD:01493
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ4plex-115 reporter+balance group.","definition_xrefs":["OMSSA:170","Unimod:533#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-115 reporter+balance reagent acylated residue","termid":"MOD:01492"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent acylated N-terminal","termid":"MOD:01711"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-115 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ115","type":"related"},{"name":"iTRAQ115nterm","type":"exact"},{"name":"iTRAQ4plex115","type":"related"}],"termid":"MOD:01493"}


id: PBO:0090075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Dsc E3 ligase complex transmembrane subunit, C-terminal UBA domain Dsc2","termid":"PBO:0090075"}


id: MONDO:0020246
data:
  {"annotated_genes":["SJAG_02362","SJAG_02878","SJAG_00845","SJAG_02286","SJAG_02194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88861],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015026"},{"annotations":[88544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957264"},{"annotations":[87796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013644"},{"annotations":[88433],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013805"},{"annotations":[89155,89156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100119"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02194":null,"SJAG_02286":null,"SJAG_02362":null,"SJAG_02878":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"inherited vitreoretinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19539","Orphanet:98668","HP:0007773"],"termid":"MONDO:0020246","terms_by_termid":{"MONDO:0013644":null,"MONDO:0013805":null,"MONDO:0015026":null,"MONDO:0100119":null,"MONDO:0957264":null},"xrefs":{"Monarch":{"xref_id":"0020246"}}}


id: PBO:0061577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurotrimin","termid":"PBO:0061577"}


id: PBO:0078628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 77B, pseudogene","termid":"PBO:0078628"}


id: PBO:0040407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V1 subunit G2","termid":"PBO:0040407"}


id: PBO:0082355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atypical protein kinase; along with its paralog, ALK1, required for proper spindle positioning and nuclear segregation following mitotic arrest, proper organization of cell polarity factors in mitosis, proper localization of formins and polarity factors, and survival in cells that activate spindle assembly checkpoint; negatively regulates the morphogenesis checkpoint in response to polarity insults in opposition to ALK1; phosphorylated in response to DNA damage; similar to mammalian haspins","termid":"PBO:0082355"}


id: PBO:0053484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 459","termid":"PBO:0053484"}


id: PBO:0000132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELLA family acetyltransferase (predicted)","termid":"PBO:0000132"}


id: GO:0090241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the rate, frequency, or extent of histone H4 acetylation, the modification of histone H4 by the addition of an acetyl group.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H4 acetylation (obsolete GO:0090241)","termid":"GO:0090241"}


id: PBO:0070310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 16","termid":"PBO:0070310"}


id: GO:0120134
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the axoneme that is close to the base of the cilium.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"proximal portion of axoneme","synonyms":[{"name":"proximal part of axoneme","type":"exact"}],"termid":"GO:0120134"}


id: PBO:0067881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 183","termid":"PBO:0067881"}


id: MONDO:0971050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated optic neuritis","termid":"MONDO:0044688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"relapsing isolated optic neuritis","secondary_identifiers":["UMLS:C5925139","Orphanet:659634","MEDGEN:1863611"],"termid":"MONDO:0971050","xrefs":{"Monarch":{"xref_id":"0971050"}}}


id: PBO:0068231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 18S ribosomal 2","termid":"PBO:0068231"}


id: GO:2000119
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sodium-dependent phosphate transport.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of sodium-dependent phosphate transport","termid":"GO:2000118"},{"relation_name":"negatively_regulates","term_name":"sodium-dependent phosphate transport","termid":"GO:0044341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sodium-dependent phosphate transport","termid":"GO:2000119"}


id: PBO:0039628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A10","termid":"PBO:0039628"}


id: PBO:0061092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK6 homeobox 1","termid":"PBO:0061092"}


id: PR:O13709
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC14C4.01c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C14C4.01c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC14C4.01c","synonyms":[{"name":"Spom972h-SPAC14C4.01c","type":"exact"}],"termid":"PR:O13709"}


id: MONDO:0021636
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glial tumor of the brain or spinal cord showing astrocytic differentiation. It includes the following clinicopathological entities: pilocytic astrocytoma, diffuse astrocytoma, anaplastic astrocytoma, pleomorphic xanthoastrocytoma, subependymal giant cell astrocytoma, and glioblastoma.","definition_xrefs":["NCIT:C6958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"astrocytic tumor","secondary_identifiers":["GARD:12928","DOID:3069","MedDRA:10003571","Orphanet:94"],"synonyms":[{"name":"astrocytic neoplasm","type":"exact"},{"name":"astrocytic tumor","type":"exact"},{"name":"astrocytoma","type":"narrow"},{"name":"astrocytoma of brain","type":"exact"},{"name":"astrocytoma of cerebrum","type":"narrow"},{"name":"astrocytoma, no ICD-O subtype","type":"exact"},{"name":"astroglioma","type":"exact"}],"termid":"MONDO:0021636","xrefs":{"Monarch":{"xref_id":"0021636"}}}


id: PBO:0059064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MOB kinase activator 3C","termid":"PBO:0059064"}


id: GO:0042659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the adoption of a specific fate by a cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell fate commitment","termid":"GO:0010453"},{"relation_name":"regulates","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell fate specification","termid":"GO:0042659"}


id: PBO:0016059
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae RAT1","termid":"PBO:0016059"}


id: PBO:0055750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA SMARCA2 (BRM) associated","termid":"PBO:0055750"}


id: FYPO:0007795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested in G1 phase after the cells have undergone two rounds of cell division under nutrient-replete conditions. This arrest resembles that of wild-type cells under conditions of nitrogen starvation.","definition_xrefs":["PMID:28476936","PMID:17121544","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"two cell divisions prior to cell cycle arrest in mitotic G1 phase without nutrient starvation","synonyms":[{"name":"two cell divisions prior to mitotic G1 arrest without nutrient starvation","type":"exact"},{"name":"two cell divisions prior to mitotic cell cycle arrest in G1 phase without nutrient starvation","type":"exact"}],"termid":"FYPO:0007795"}


id: PBO:0000272
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.2.19","termid":"PBO:0000272"}


id: FYPO:0002298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable germinated spores with elongated germ tubes, and in which some cells divide once and others do not divide. In the cells that divide once, an inviable cell forms from the growing end of the germ tube, but does not divide further.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including divided and undivided germinated spores, with elongated germ tubes (obsolete FYPO:0002298)","termid":"FYPO:0002298"}


id: PBO:0047888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(6)(p25.1)","termid":"PBO:0047888"}


id: PBO:0065973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD54 homolog B","termid":"PBO:0065973"}


id: MONDO:0011929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal anomaly characterized by distinctive facial dysmorphic features, hypotonia, developmental delay, intellectual disability, seizures, heart defects, hearing impairment and prenatal onset growth deficiency.","definition_xrefs":["Orphanet:1606"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"epilepsy","termid":"MONDO:0005027"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 1","termid":"MONDO:0016883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1p36 deletion syndrome","secondary_identifiers":["GARD:6082","ICD9:758.39","MESH:C535362","OMIM:607872","MEDGEN:334629","SCTID:699306003","NANDO:1200682","UMLS:C1842870","NCIT:C74983","DECIPHER:18","DOID:0060410"],"synonyms":[{"name":"1p telomere deletion syndrome","type":"exact"},{"name":"1p36 deletion syndrome","type":"exact"},{"name":"1p36 microdeletion syndrome","type":"exact"},{"name":"Del(1)(p36)","type":"exact"},{"name":"chromosome 1p36 deletion syndrome","type":"exact"},{"name":"chromosome 1p36 deletion syndrome, distal, isolated cases","type":"exact"},{"name":"deletion 1p36","type":"exact"},{"name":"deletion 1pter","type":"exact"},{"name":"monosomy 1P36 syndrome","type":"related"},{"name":"monosomy 1p36","type":"exact"},{"name":"monosomy 1pter","type":"exact"},{"name":"subtelomeric 1p36 deletion","type":"exact"}],"termid":"MONDO:0011929","xrefs":{"Monarch":{"xref_id":"0011929"}}}


id: GO:0004665
data:
  {"annotated_genes":["SJAG_04652"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69469],"is_not":false,"summary":null,"term":"GO:0004665"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + prephenate = (4-hydroxyphenyl)pyruvate + CO2 + NADPH.","definition_xrefs":["EC:1.3.1.13","RHEA:21640"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04652":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"prephenate dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R01730","MetaCyc:PREPHENATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"prephenate (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"prephenate:NADP+ oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0004665","terms_by_termid":{"GO:0004665":null}}


id: PBO:0048494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCSH pseudogene 6","termid":"PBO:0048494"}


id: GO:0046019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involving pheromones that modulates the frequency, rate or extent or transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:go_curators","GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by pheromones (obsolete GO:0046019)","synonyms":[{"name":"regulation of transcription from Pol II promoter by pheromones","type":"exact"}],"termid":"GO:0046019"}


id: MOD:00364
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to 5-hydroxy-N6,N6,N6-trimethyl-L-lysine.","definition_xrefs":["RESID:AA0359","PubMed:14661085","PubMed:11349130","Unimod:445#K"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"5-hydroxy-L-lysine","termid":"MOD:00037"},{"relation_name":"has_functional_parent","term_name":"N6,N6,N6-trimethyl-L-lysine","termid":"MOD:00083"},{"relation_name":"is_a","term_name":"N-methylated residue","termid":"MOD:00602"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"5-hydroxy-N6,N6,N6-trimethyl-L-lysine","synonyms":[{"name":"(2R,5Xi)-5-amino-5-carboxy-2-hydroxy-N,N,N-trimethylpentan-1-aminium","type":"exact"},{"name":"(2Xi,5S)-5-amino-5-carboxy-2-hydroxy-N,N,N-trimethylpentanaminium","type":"exact"},{"name":"(2Xi,5S)-5-azanyl-5-carboxy-2-hydroxy-N,N,N-trimethylpentanazanium","type":"exact"},{"name":"5-hydroxy-N(zeta)-trimethyllysine","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyl","type":"related"},{"name":"5-hydroxy-N6,N6,N6-trimethyl-L-lysine","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyllysin-N6-ium","type":"exact"},{"name":"5-hydroxy-N6,N6,N6-trimethyllysine cation","type":"exact"},{"name":"5-hydroxylated N6,N6,N6-trimethylated L-lysine","type":"exact"},{"name":"5HyN6Me3Lys","type":"exact"},{"name":"Hydroxytrimethyl","type":"related"},{"name":"MOD_RES N6,N6,N6-trimethyl-5-hydroxylysine","type":"exact"},{"name":"alpha-amino-epsilon-dimethylamino-delta-hydroxycaproic acid","type":"exact"},{"name":"delta-hydroxy-epsilon-N,N,N-trimethyllysine","type":"exact"},{"name":"lysine derivative Lys(z)","type":"exact"}],"termid":"MOD:00364"}


id: MONDO:8000008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of intellectual deficit, congenital cataract, and hypogonadotropic hypogonadism.","definition_xrefs":["Orphanet:1387"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"},{"relation_name":"is_a","term_name":"Martsolf syndrome","termid":"MONDO:0023910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Martsolf syndrome 1","secondary_identifiers":["DOID:0111586","OMIM:212720","GARD:3406","MEDGEN:1778114","SCTID:722380003","UMLS:C5542298","MESH:C536028"],"synonyms":[{"name":"MARTSOLF syndrome","type":"broad"},{"name":"Martsolf syndrome","type":"broad"},{"name":"cataract-intellectual disability-hypogonadism","type":"related"},{"name":"cataract-intellectual disability-hypogonadism syndrome","type":"exact"},{"name":"cataract-mental retardation-hypogonadism","type":"exact"}],"termid":"MONDO:8000008","xrefs":{"Monarch":{"xref_id":"8000008"}}}


id: PR:Q9USZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02755"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1306.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1306.02","secondary_identifiers":["UniProtKB:Q9USZ0"],"synonyms":[{"name":"Spom972h-WDR6","type":"exact"}],"termid":"PR:Q9USZ0"}


id: PBO:0078953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCT) 4-1","termid":"PBO:0078953"}


id: PBO:0039927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF28 pseudogene 1","termid":"PBO:0039927"}


id: GO:0001819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of production of a cytokine.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of cytokine production","secondary_identifiers":["GO:0042108","GO:0050715"],"synonyms":[{"name":"activation of cytokine production","type":"narrow"},{"name":"positive regulation of cytokine biosynthetic process","type":"narrow"},{"name":"positive regulation of cytokine secretion","type":"narrow"},{"name":"stimulation of cytokine production","type":"narrow"},{"name":"up regulation of cytokine production","type":"exact"},{"name":"up-regulation of cytokine production","type":"exact"},{"name":"upregulation of cytokine production","type":"exact"}],"termid":"GO:0001819"}


id: PBO:0046716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 2","termid":"PBO:0046716"}


id: FYPO:0006481
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cohesin ssDNA (lagging strand) loading is increased during the mitotic cell cycle. Cohesin ssDNA (lagging strand) loading is the topological linking of a cohesin ring complex to single-stranded DNA, i.e. the lagging strand, in chromatin.","definition_xrefs":["GO:0062022","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"},{"relation_name":"is_a","term_name":"abnormal regulation of molecular function","termid":"FYPO:0000682"},{"relation_name":"is_a","term_name":"abnormal cohesin loading","termid":"FYPO:0006479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased mitotic cohesin ssDNA (lagging strand) loading","synonyms":[{"name":"increased cohesin ssDNA (lagging strand) loading during mitotic cell cycle","type":"exact"},{"name":"increased cohesin ssDNA (lagging strand) loading during vegetative growth","type":"exact"},{"name":"increased mitotic cohesin association with ssDNA (lagging strand) chromatin","type":"exact"},{"name":"increased mitotic cohesin localization to ssDNA (lagging strand) chromatin","type":"exact"},{"name":"increased second-DNA capture","type":"exact"}],"termid":"FYPO:0006481"}


id: PBO:0028995
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_proline_import","termid":"PBO:0028995"}


id: GO:0010812
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of cell-substrate adhesion. Cell-substrate adhesion is the attachment of a cell to the underlying substrate via adhesion molecules.","definition_xrefs":["GOC:pf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell-substrate adhesion","termid":"GO:0010810"},{"relation_name":"negatively_regulates","term_name":"cell-substrate adhesion","termid":"GO:0031589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell-substrate adhesion","termid":"GO:0010812"}


id: GO:0072022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the descending thin limb over time, from its formation to the mature structure. The descending thin limb is a part of the loop of Henle situated just after the proximal straight tubule (S3). It extends to the tip of the loop of Henle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"loop of Henle development","termid":"GO:0072070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"descending thin limb development","termid":"GO:0072022"}


id: PBO:0075434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member C","termid":"PBO:0075434"}


id: PBO:0029597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pyruvylated_galactose_absent_from_cell","termid":"PBO:0029597"}


id: PBO:0001985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Holliday junction resolvase subunit Eme1","termid":"PBO:0001985"}


id: GO:0046061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009217"},{"relation_name":"is_a","term_name":"dATP metabolic process","termid":"GO:0046060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dATP catabolic process","synonyms":[{"name":"dATP breakdown","type":"exact"},{"name":"dATP catabolism","type":"exact"},{"name":"dATP degradation","type":"exact"}],"termid":"GO:0046061"}


id: GO:0018746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-3,4-oxide + H2O = trans-3,4-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-3,4-epoxide hydrolase activity (obsolete GO:0018746)","termid":"GO:0018746"}


id: PBO:0075433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member B1","termid":"PBO:0075433"}


id: GO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of salivary gland determination.","definition_xrefs":["GOC:go_curators","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"salivary gland boundary specification","termid":"GO:0007432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of salivary gland boundary specification","synonyms":[{"name":"regulation of salivary gland determination","type":"exact"}],"termid":"GO:0045704"}


id: PBO:0062459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 140 pseudogene","termid":"PBO:0062459"}


id: GO:1903515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of calcium ion from cytosol to endoplasmic reticulum.","definition_xrefs":["GO_REF:0000078","GOC:BHF","GOC:mtg_cardiac_conduct_nov11","GOC:rl","GOC:TermGenie","PMID:16402920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"calcium ion transmembrane transport","termid":"GO:0070588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"calcium ion transport from cytosol to endoplasmic reticulum","termid":"GO:1903515"}


id: GO:0045995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of embryonic development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"embryo development","termid":"GO:0009790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic development","termid":"GO:0045995"}


id: GO:0009884
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a cytokinin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:lr","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"cytokinin receptor activity","termid":"GO:0009884"}


id: GO:0034163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of toll-like receptor 9 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039531"},{"relation_name":"regulates","term_name":"toll-like receptor 9 signaling pathway","termid":"GO:0034162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of toll-like receptor 9 signaling pathway","synonyms":[{"name":"regulation of TLR9 signaling pathway","type":"exact"},{"name":"regulation of toll-like receptor 9 signalling pathway","type":"exact"}],"termid":"GO:0034163"}


id: null:local:null
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null","termid":"null:local:null"}


id: PBO:0083050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deubiquitylation enzyme that binds to the chaperone-ATPase Cdc48p; may contribute to regulation of protein degradation by deubiquitylating substrates that have been ubiquitylated by Ufd2p; member of the Ovarian Tumor (OTU) family; protein abundance increases in response to DNA replication stress","termid":"PBO:0083050"}


id: MONDO:0958345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysraphic abnormality characterized by a persistent connection between the neural tissue and overlying skin. The stalk-like connection consists of a fibroneural tract (mainly composed of fibrous attenuated mesenchymal tissue and neural elements without an epithelial lining) connecting the skin lesion to the underlying dorsal surface of the spinal cord. Fibroneural stalk varies in thickness and complexity and they pass through the deep fascia, a bifid lamina/ the interspinous ligament, and the dura. It can be associated with filum anomaly. Chiari II malformation is not present.","definition_xrefs":["Orphanet:645196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphism with stalk","termid":"MONDO:0958259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"limited dorsal myeloschisis","secondary_identifiers":["UMLS:C5781237","MEDGEN:1853137"],"termid":"MONDO:0958345","xrefs":{"Monarch":{"xref_id":"0958345"}}}


id: GO:0097371
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a member of the MDM2/MDM4 protein family, comprising negative regulators of p53.","definition_xrefs":["InterPro:IPR016495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"MDM2/MDM4 family protein binding","termid":"GO:0097371"}


id: GO:0019228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An action potential that occurs in a neuron.","definition_xrefs":["GOC:isa_complete","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"action potential","termid":"GO:0001508"},{"relation_name":"part_of","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential","synonyms":[{"name":"generation of action potential","type":"related"}],"termid":"GO:0019228"}


id: MONDO:0009208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faciothoracogenital syndrome","secondary_identifiers":["MEDGEN:443995","UMLS:C2931184","MESH:C536387","OMIM:227320"],"synonyms":[{"name":"congenital anomalies, involving mainly the face, thorax, and genitalia","type":"related"},{"name":"facio thoraco genital syndrome","type":"related"},{"name":"faciothoracogenital syndrome","type":"exact"}],"termid":"MONDO:0009208","xrefs":{"Monarch":{"xref_id":"0009208"}}}


id: MONDO:0005761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parasitic infestation of the human lymphatic system by wuchereria bancrofti or brugia malayi. It is also called lymphatic filariasis.","definition_xrefs":["MESH:D004605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic eyelid infestation","termid":"MONDO:0001812"},{"relation_name":"is_a","term_name":"elephantiasis","termid":"MONDO:0005424"},{"relation_name":"is_a","term_name":"filariasis","termid":"MONDO:0016075"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005328"],"is_obsolete":false,"name":"filarial elephantiasis","secondary_identifiers":["SCTID:14100003","SCTID:240820001","NCIT:C128360","NORD:1082","icd11.foundation:247221550","UMLS:C0013884","GARD:3321","EFO:0007272","ICD9:374.83","DOID:12211","MedDRA:10016675","Orphanet:2035","MEDGEN:8583"],"synonyms":[{"name":"Bancroftian elephantiasis","type":"exact"},{"name":"Bancroftian filarial chyluria","type":"exact"},{"name":"Bancroftian filariasis","type":"related"},{"name":"Elephantiasis","type":"broad"},{"name":"Malayi tropical eosinphilia","type":"related"},{"name":"Wuchereria Bancrofti infection","type":"related"},{"name":"Wuchereriasis","type":"related"},{"name":"elephantiasis","type":"broad"},{"name":"elephantiasis of eyelid","type":"exact"},{"name":"eyelid elephantiasis","type":"exact"}],"termid":"MONDO:0005761","xrefs":{"Monarch":{"xref_id":"0005761"}}}


id: PBO:0040761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beclin 1 pseudogene 2","termid":"PBO:0040761"}


id: PBO:0091654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane uricil/uridine transmembrane transporter transmembrane transporter family","termid":"PBO:0091654"}


id: PBO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 5 (predicted)","termid":"PBO:0002218"}


id: PBO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial glycerol dehydrogenase Gld1","termid":"PBO:0001392"}


id: PBO:0064616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1 pseudogene 6","termid":"PBO:0064616"}


id: MONDO:0015106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare urogenital disease (obsolete MONDO:0015106)","secondary_identifiers":["Orphanet:101433"],"termid":"MONDO:0015106","xrefs":{"Monarch":{"xref_id":"0015106"}}}


id: PBO:0091706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin-dependent protein kinase Ppk27","termid":"PBO:0091706"}


id: PBO:0056875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MHC class I polypeptide-related sequence E (pseudogene)","termid":"PBO:0056875"}


id: SO:0001233
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified RNA base in which methylhypoxanthine is bound to the ribose ring.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylinosine","termid":"SO:0001233"}


id: FYPO:0003625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the size, shape, or structure of the microtubule cytoskeleton is abnormal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002399","FYPO:0000054","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","synonyms":[{"name":"abnormal microtubule cytoskeleton morphology during interphase of mitotic cell cycle","type":"exact"},{"name":"abnormal microtubule cytoskeleton morphology during mitotic interphase during vegetative growth","type":"related"}],"termid":"FYPO:0003625"}


id: PBO:0028618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_U1_snRNP_binding","termid":"PBO:0028618"}


id: PBO:0073661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SINHCAF pseudogene 1","termid":"PBO:0073661"}


id: MONDO:0004620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse subtype of classical Hodgkin lymphoma which is rich in Hodgkin and Reed-Sternberg cells and/or depleted in non-neoplastic lymphocytes. (WHO, 2008)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic Hodgkin lymphoma","termid":"MONDO:0009348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Hodgkin's lymphoma, lymphocytic depletion","secondary_identifiers":["GARD:19594","UMLS:C0152267","NCIT:C9125","icd11.foundation:1729182645","ONCOTREE:LDCHL","ICD9:201.7","MEDGEN:57760","DOID:8628","SCTID:118610003","Orphanet:98846"],"synonyms":[{"name":"Adult lymphocyte-depleted Classic Hodgkin lymphoma","type":"exact"},{"name":"Hodgkin lymphoma, lymphocyte depletion","type":"exact"},{"name":"Hodgkin's disease, lymphocytic depletion","type":"exact"},{"name":"Hodgkin's disease, lymphocytic depletion NOS (morphologic abnormality)","type":"exact"},{"name":"Hodgkin's disease, lymphocytic depletion, unspecified site, extranodal and solid organ sites","type":"exact"},{"name":"Hodgkin's lymphocytic depletion of unspecified site","type":"exact"},{"name":"adult HDLD","type":"exact"},{"name":"adult LDHD","type":"exact"},{"name":"adult lymphocyte depleted Hodgkin lymphoma","type":"exact"},{"name":"adult lymphocyte depleted Hodgkin's lymphoma","type":"exact"},{"name":"adult lymphocyte depleted classical Hodgkin lymphoma","type":"exact"},{"name":"adult lymphocyte depletion Hodgkin's disease","type":"exact"},{"name":"adult lymphocyte-depleted classical Hodgkin lymphoma","type":"exact"},{"name":"classic Hodgkin lymphoma, lymphocyte-depleted type","type":"exact"},{"name":"lymphocyte-depleted classical Hodgkin lymphoma","type":"exact"}],"termid":"MONDO:0004620","xrefs":{"Monarch":{"xref_id":"0004620"}}}


id: GO:0140654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tryprostatin A.","definition_xrefs":["GOC:ach","PMID:19226505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole alkaloid biosynthetic process","termid":"GO:0035835"},{"relation_name":"is_a","term_name":"indole-containing compound biosynthetic process","termid":"GO:0042435"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"tryprostatin A biosynthetic process","synonyms":[{"name":"tryprostatin A anabolism","type":"exact"},{"name":"tryprostatin A biosynthesis","type":"exact"},{"name":"tryprostatin A formation","type":"exact"},{"name":"tryprostatin A synthesis","type":"exact"}],"termid":"GO:0140654"}


id: PBO:0109283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRXN1 divergent transcript","termid":"PBO:0109283"}


id: MONDO:0017715
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of fatty acid oxidation and ketogenesis","termid":"MONDO:0017713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydrogenase deficiency","secondary_identifiers":["OMIM:231530","GARD:21319","MESH:C535310","MEDGEN:266222","Orphanet:309127","UMLS:C1291230"],"termid":"MONDO:0017715","xrefs":{"Monarch":{"xref_id":"0017715"}}}


id: MONDO:0011119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior segment dysgenesis","termid":"MONDO:0019503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"iridogoniodysgenesis","secondary_identifiers":["MEDGEN:861486","UMLS:C4013049","icd11.foundation:2030725523","GARD:16484","DOID:0050786","Orphanet:98634"],"synonyms":[{"name":"IRID","type":"exact"}],"termid":"MONDO:0011119","xrefs":{"Monarch":{"xref_id":"0011119"}}}


id: PBO:0055146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2565","termid":"PBO:0055146"}


id: GO:0140713
data:
  {"annotated_genes":["SJAG_03905","SJAG_00913","SJAG_02571","SJAG_02906","SJAG_00170","SJAG_04692","SJAG_02416","SJAG_00942","SJAG_00914","SJAG_04272","SJAG_00925","SJAG_04547","SJAG_02439","SJAG_02198","SJAG_04038","SJAG_02035","SJAG_01005","SJAG_04561","SJAG_02314","SJAG_03366","SJAG_04257","SJAG_03128","SJAG_04670","SJAG_02698","SJAG_04758","SJAG_03867","SJAG_02348","SJAG_00259"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90835,92080,97335,104927,111709,113235],"is_not":false,"summary":null,"term":"GO:0140713"},{"annotations":[89992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140849"},{"annotations":[96623,98467,105580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140665"},{"annotations":[115141],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140674"},{"annotations":[113332,115667,118969,110142,100157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000511"},{"annotations":[120031,116604,110823,109766,96844,94391,114866,112272,110818,97463,97085,117143],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000510"}]},"cv_name":"molecular_function","definition":"Binding to and carrying a histone or a histone complex to unload or deposit it as a nucleosome. The histone can be newly synthesized or result from nucleosome disassembly (either spontaneously, or by a histone chaperone).","definition_xrefs":["PMID:26459557"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein carrier chaperone","termid":"GO:0140597"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00259":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_00942":null,"SJAG_01005":null,"SJAG_02035":null,"SJAG_02198":null,"SJAG_02314":null,"SJAG_02348":null,"SJAG_02416":null,"SJAG_02439":null,"SJAG_02571":null,"SJAG_02698":null,"SJAG_02906":null,"SJAG_03128":null,"SJAG_03366":null,"SJAG_03867":null,"SJAG_03905":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04547":null,"SJAG_04561":null,"SJAG_04670":null,"SJAG_04692":null,"SJAG_04758":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140597"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140104"}],"interesting_parent_ids":["GO:0140597","GO:0140104","GO:0003674"],"is_obsolete":false,"name":"histone chaperone activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9822185"],"synonyms":[{"name":"histone carrier activity","type":"exact"},{"name":"nucleosome remodeling activity","type":"related"}],"termid":"GO:0140713","terms_by_termid":{"GO:0000510":null,"GO:0000511":null,"GO:0140665":null,"GO:0140674":null,"GO:0140713":null,"GO:0140849":null}}


id: PBO:0028354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_CTD_phosphatase_activity","termid":"PBO:0028354"}


id: PBO:0077732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tensin 1","termid":"PBO:0077732"}


id: PBO:0078943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 1-1","termid":"PBO:0078943"}


id: MONDO:0043589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fractures of the short, constricted portion of the thigh bone between the femur head and the trochanters. It excludes intertrochanteric fractures which are HIP FRACTURES.","definition_xrefs":["MESH:D005265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hip fracture","termid":"MONDO:0005327"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"femoral neck fracture","secondary_identifiers":["SCTID:5913000"],"synonyms":[{"name":"bone fracture of neck of femur","type":"exact"},{"name":"femoral neck fracture","type":"exact"},{"name":"femur neck fracture","type":"related"},{"name":"femur neck fractures","type":"related"},{"name":"fracture of hip","type":"related"},{"name":"fracture of neck of femur","type":"exact"},{"name":"neck of femur bone fracture","type":"exact"},{"name":"nof - fracture of neck of femur","type":"related"}],"termid":"MONDO:0043589","xrefs":{"Monarch":{"xref_id":"0043589"}}}


id: PBO:0051055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy diversity 2/OR15-2B (non-functional)","termid":"PBO:0051055"}


id: SO:0100004
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of 3 consecutive residues with dihedral angles as follows: res i: phi -90 bounds -120 to -60, res i: psi -10 bounds -50 to 30, res i+1: phi -75 bounds -100 to -50, res i+1: psi 140 bounds 110 to 170. An extra restriction of the length of the O to O distance would be useful, that it be less than 5 Angstrom. More precisely these two oxygens are the main chain carbonyl oxygen atoms of residues i-1 and i+1.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"catmat_left_handed_three","synonyms":[{"name":"catmat-3l","type":"exact"}],"termid":"SO:0100004"}


id: MONDO:1010735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Scleroderma that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"scleroderma, non-human animal","termid":"MONDO:1010119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scleroderma, chicken","secondary_identifiers":["OMIA:001202-9031"],"termid":"MONDO:1010735","xrefs":{"Monarch":{"xref_id":"1010735"}}}


id: PBO:0086294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in mitochondrial DNA recombinational repair; also involved in interstrand cross-link repair; binds to and catalyzes the annealing of single-stranded mtDNA; oligomerizes to form rings and filaments; related to Rad52-type recombination proteins, with limited overall similarity but sharing conserved functionally important residues; component of the mitochondrial nucleoid, required for the repair of oxidative mtDNA damage and mitochondrial genome maintenance","termid":"PBO:0086294"}


id: PBO:0055914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 37 member A2","termid":"PBO:0055914"}


id: GO:1902147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to cytokinesis checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to cell cycle checkpoint signaling","termid":"GO:1902145"},{"relation_name":"regulates","term_name":"response to cytokinesis checkpoint signaling","termid":"GO:0072399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to cytokinesis checkpoint signaling","secondary_identifiers":["GO:1902149"],"synonyms":[{"name":"regulation of cytokinesis checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in cytokinesis checkpoint","type":"exact"}],"termid":"GO:1902147"}


id: GO:1904251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bile acid metabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of steroid metabolic process","termid":"GO:0019218"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"bile acid metabolic process","termid":"GO:0008206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of bile acid metabolic process","synonyms":[{"name":"regulation of bile acid metabolism","type":"exact"}],"termid":"GO:1904251"}


id: PBO:0005850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX/EXS domain protein (predicted)","termid":"PBO:0005850"}


id: FYPO:0008164
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal during mitotic M-phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during vegetative growth","termid":"FYPO:0001268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}


id: PBO:0005584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf1","termid":"PBO:0005584"}


id: MOD:01115
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an L-tryptophan residue with a group derived from an isoprene polymer, such as a geranyl (C10), farnesyl (C15) or geranylgeranyl (C20).","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isoprenylated residue","termid":"MOD:00703"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"isoprenylated tryptophan","synonyms":[{"name":"IpTrp","type":"exact"}],"termid":"MOD:01115"}


id: PATO:0000684
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000684 absolute incidence value (obsolete PATO:0000684)","termid":"PATO:0000684"}


id: PBO:0000900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Fsv1","termid":"PBO:0000900"}


id: PBO:0067532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 676, pseudogene","termid":"PBO:0067532"}


id: MONDO:0007016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Deficiency of vitamin A due to malnutrition, malabsorption, or dietary lack. It is manifested with reduced night vision, night blindness, and xerophthalmia.","definition_xrefs":["NCIT:C85220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin deficiency disorder","termid":"MONDO:0024298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin A deficiency","secondary_identifiers":["ICD9:264.9","EFO:1001237","MESH:D014802","SCTID:72000004","MedDRA:10047586","MEDGEN:22668","ICD10CM:E50","icd11.foundation:435342452","ICD9:264.8","ICD10WHO:E50","HP:0004905","ICD9:264","UMLS:C0042842"],"synonyms":[{"name":"deficiencies, vitamin A","type":"related"},{"name":"deficiency, vitamin A","type":"related"},{"name":"vitamin A deficiencies","type":"related"},{"name":"vitamin A deficiency","type":"exact"},{"name":"vitamin A deficiency (disease)","type":"exact"}],"termid":"MONDO:0007016","xrefs":{"Monarch":{"xref_id":"0007016"}}}


id: MONDO:0019126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Intractable diarrhea of infancy (IDI) is a heterogeneous syndrome that includes several diseases with different aetiologies. Provisional classification of IDI, according to villous atrophy and based on immunohistological criteria, distinguishes two clearly different groups of IDI: 1) Immune-mediated: characterized by a mononuclear cell infiltration of the lamina propria and considered as being related to T cell activation. 2) The second histological pattern includes early onset severe intractable diarrhea histologically characterized by villous atrophy with low or without mononuclear cell infiltration of the lamina propria but specific histological abnormalities involving the epithelium.","definition_xrefs":["Orphanet:73014"],"gene_count":0,"genotype_count":0,"name":"obsolete intractable diarrhea of infancy (obsolete MONDO:0019126)","synonyms":[{"name":"IDI","type":"exact"}],"termid":"MONDO:0019126","xrefs":{"Monarch":{"xref_id":"0019126"}}}


id: PATO:0000972
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000972 relative permeability (obsolete PATO:0000972)","termid":"PATO:0000972"}


id: PBO:0054420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1816","termid":"PBO:0054420"}


id: PATO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed posteriorly.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"posterior orientation","synonyms":[{"name":"posteriorly directed","type":"exact"}],"termid":"PATO:0002499"}


id: MONDO:0008074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nerve growth factor, alpha subunit (obsolete MONDO:0008074)","secondary_identifiers":["OMIM:162020"],"synonyms":[{"name":"NGFA","type":"exact"},{"name":"nerve growth factor, ALPHA SUBUNIT","type":"exact"},{"name":"nerve growth factor, alpha subunit","type":"exact"}],"termid":"MONDO:0008074","xrefs":{"Monarch":{"xref_id":"0008074"}}}


id: PBO:0089697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase, human NT5E family","termid":"PBO:0089697"}


id: PBO:0042693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxyl ester lipase","termid":"PBO:0042693"}


id: GO:0048789
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and arrangement of cytomatrix proteins to form complexes in the cell cortex beneath the active zone, i.e. just beneath the presynaptic plasma membrane.","definition_xrefs":["GOC:ef","PMID:12812759","GOC:jid","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cortical cytoskeleton organization","termid":"GO:0030865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"cytoskeletal matrix organization at active zone","synonyms":[{"name":"cytoskeletal matrix organisation at active zone","type":"exact"}],"termid":"GO:0048789"}


id: GO:0007208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating receptor G protein-coupled receptor signaling pathway initiated by serotonin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","GOC:mah","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled serotonin receptor signaling pathway","termid":"GO:0098664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating serotonin receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by serotonin receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by serotonin receptor signalling pathway","type":"related"},{"name":"serotonin receptor, phospholipase C activating pathway","type":"related"}],"termid":"GO:0007208"}


id: MONDO:0044243
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nail high-sulfur protein (obsolete MONDO:0044243)","secondary_identifiers":["OMIM:161070"],"synonyms":[{"name":"nail high-sulfur PROTEIN","type":"related"}],"termid":"MONDO:0044243","xrefs":{"Monarch":{"xref_id":"0044243"}}}


id: PBO:0066576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RHEB like 1","termid":"PBO:0066576"}


id: PBO:0062074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 5","termid":"PBO:0062074"}


id: GO:0039691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is double stranded RNA (dsRNA). Genomic dsRNA is first transcribed into single-stranded (ss) mRNA, which is then replicated to ds-genomic RNA.","definition_xrefs":["GOC:jl","VZ:1936","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double stranded viral RNA replication","termid":"GO:0039691"}


id: PBO:0064110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystin 1 like 1, transient receptor potential channel interacting","termid":"PBO:0064110"}


id: GO:0030206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chondroitin sulfate, any member of a group of 10-60 kDa glycosaminoglycans, widely distributed in cartilage and other mammalian connective tissues, the repeat units of which consist of beta-(1,4)-linked D-glucuronyl beta-(1,3)-N-acetyl-D-galactosamine sulfate.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete chondroitin sulfate biosynthetic process (obsolete GO:0030206)","secondary_identifiers":["Reactome:R-HSA-2022870"],"synonyms":[{"name":"chondroitin sulfate anabolism","type":"exact"},{"name":"chondroitin sulfate biosynthesis","type":"exact"},{"name":"chondroitin sulfate formation","type":"exact"},{"name":"chondroitin sulfate synthesis","type":"exact"},{"name":"chondroitin sulphate biosynthesis","type":"exact"},{"name":"chondroitin sulphate biosynthetic process","type":"exact"}],"termid":"GO:0030206"}


id: PBO:0053603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 635","termid":"PBO:0053603"}


id: GO:0033449
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a GUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"GUU codon-amino acid adaptor activity","synonyms":[{"name":"GTT codon-amino acid adaptor activity","type":"exact"},{"name":"valine tRNA","type":"related"}],"termid":"GO:0033449"}


id: GO:0035785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nickel ions within a cell.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular monoatomic cation homeostasis","termid":"GO:0030003"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"intracellular nickel ion homeostasis","synonyms":[{"name":"cellular nickel homeostasis","type":"exact"},{"name":"cellular nickel ion homeostasis","type":"exact"}],"termid":"GO:0035785"}


id: MONDO:0007162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asymmetric short stature syndrome","secondary_identifiers":["MESH:C566248","OMIM:108450","UMLS:C1862458","MEDGEN:354753"],"synonyms":[{"name":"asymmetric short stature syndrome","type":"exact"}],"termid":"MONDO:0007162","xrefs":{"Monarch":{"xref_id":"0007162"}}}


id: GO:0046275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavonoids, a group of phenolic derivatives containing a flavan skeleton.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"flavonoid metabolic process","termid":"GO:0009812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flavonoid catabolic process","synonyms":[{"name":"flavonoid breakdown","type":"exact"},{"name":"flavonoid catabolism","type":"exact"},{"name":"flavonoid degradation","type":"exact"}],"termid":"GO:0046275"}


id: MONDO:0016863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Duane-radial ray syndrome","termid":"MONDO:0011812"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"Okihiro syndrome due to 20q13 microdeletion","secondary_identifiers":["MEDGEN:1826026","Orphanet:261638","GARD:20787","UMLS:C5679682"],"synonyms":[{"name":"Duane-radial ray syndrome due to monosomy 20q13","type":"exact"},{"name":"Okihiro syndrome due to del(20)(q13)","type":"exact"},{"name":"Okihiro syndrome due to monosomy 20q13","type":"exact"}],"termid":"MONDO:0016863","xrefs":{"Monarch":{"xref_id":"0016863"}}}


id: PBO:0073440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Scm like with four mbt domains 2","termid":"PBO:0073440"}


id: PBO:0086314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with sequence similarity to acireductone synthases; involved in methionine salvage; found in both the cytoplasm and nucleus","termid":"PBO:0086314"}


id: PBO:0004035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA dihydrouridine synthase Dus1 (predicted)","termid":"PBO:0004035"}


id: MONDO:0850127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory myofibroblastic tumor","termid":"MONDO:0015798"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epithelioid inflammatory myofibroblastic sarcoma","secondary_identifiers":["UMLS:C5880506","DOID:0080372","MEDGEN:1843877"],"termid":"MONDO:0850127","xrefs":{"Monarch":{"xref_id":"0850127"}}}


id: MONDO:1010699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease that occurs in sheep due to a mutation in the PFKM gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease, non-human animal","termid":"MONDO:1011419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogen storage disease, PFKM-related, dog","secondary_identifiers":["OMIA:000421-9615"],"synonyms":[{"name":"glycogen storage disease VII, dog","type":"related"},{"name":"phosphofructokinase deficiency, dog","type":"exact"}],"termid":"MONDO:1010699","xrefs":{"Monarch":{"xref_id":"1010699"}}}


id: PBO:0031016
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_cisplatin","termid":"PBO:0031016"}


id: PBO:0048968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPALPP motifs containing 1","termid":"PBO:0048968"}


id: GO:0061769
data:
  {"annotated_genes":["SJAG_04693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[115149],"is_not":false,"summary":null,"term":"GO:0061769"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: N-ribosylnicotinate + ATP = ADP + 2 H+ + nicotinate mononucleotide.","definition_xrefs":["PMID:17914902","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"ribosylnicotinate kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-8869607","Reactome:R-HSA-8869606"],"termid":"GO:0061769","terms_by_termid":{"GO:0061769":null}}


id: PR:Q1MTR0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial inner membrane protease ATP23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21711:SF0","OMA:SCHPO04204","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial inner membrane protease atp23 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.12","secondary_identifiers":["UniProtKB:Q1MTR0"],"synonyms":[{"name":"Spom972h-XRCC6BP1","type":"exact"}],"termid":"PR:Q1MTR0"}


id: MONDO:0016810
data:
  {"annotated_genes":["SJAG_02658"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88328],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009783"}]},"cv_name":"mondo","definition":"Autosomal recessive form of progressive external ophthalmoplegia.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia","termid":"MONDO:0005181"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02658":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0004069","MONDO:0006025","MONDO:0005336","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive progressive external ophthalmoplegia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:340509","GARD:1191","UMLS:C1850303","Orphanet:254886","MESH:C564926","ICD10CM:H49.4"],"synonyms":[{"name":"arPEO","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive","type":"exact"}],"termid":"MONDO:0016810","terms_by_termid":{"MONDO:0009783":null},"xrefs":{"Monarch":{"xref_id":"0016810"}}}


id: MONDO:0012575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchio-oto-renal syndrome in which the cause of the disease is a mutation in the SIX5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchio-oto-renal syndrome","termid":"MONDO:0007029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"branchiootorenal syndrome 2","secondary_identifiers":["DOID:0111424","UMLS:C1970479","MEDGEN:410081","GARD:15503","OMIM:610896"],"synonyms":[{"name":"BOR2","type":"related"},{"name":"SIX5 branchio-oto-renal syndrome","type":"exact"},{"name":"branchio-oto-renal syndrome caused by mutation in SIX5","type":"exact"},{"name":"branchiootorenal syndrome 2","type":"exact"},{"name":"branchiootorenal syndrome type 2","type":"exact"}],"termid":"MONDO:0012575","xrefs":{"Monarch":{"xref_id":"0012575"}}}


id: MONDO:0002108
data:
  {"annotated_genes":["SJAG_04067","SJAG_03453","SJAG_01970"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87831,89309,89310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the thyroid gland","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid tumor","termid":"MONDO:0015074"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200074","NCIT:C7510","SCTID:363478007","ICD9:193","DOID:1781","UMLS:C0007115","ICD10CM:C73","MEDGEN:2869"],"synonyms":[{"name":"cancer of thyroid gland","type":"exact"},{"name":"malignant neoplasm of the thyroid","type":"exact"},{"name":"malignant neoplasm of the thyroid gland","type":"exact"},{"name":"malignant neoplasm of thyroid","type":"exact"},{"name":"malignant neoplasm of thyroid gland","type":"exact"},{"name":"malignant thyroid gland neoplasm","type":"exact"},{"name":"malignant thyroid gland tumor","type":"exact"},{"name":"malignant thyroid gland tumour","type":"exact"},{"name":"malignant thyroid neoplasm","type":"exact"},{"name":"malignant thyroid tumor","type":"exact"},{"name":"malignant thyroid tumour","type":"exact"},{"name":"malignant tumor of the thyroid","type":"exact"},{"name":"malignant tumor of the thyroid gland","type":"exact"},{"name":"malignant tumor of thyroid","type":"exact"},{"name":"malignant tumor of thyroid gland","type":"exact"},{"name":"malignant tumour of the thyroid","type":"exact"},{"name":"malignant tumour of the thyroid gland","type":"exact"},{"name":"malignant tumour of thyroid","type":"exact"},{"name":"malignant tumour of thyroid gland","type":"exact"},{"name":"neoplasm of thyroid gland","type":"broad"},{"name":"thyroid gland cancer","type":"exact"},{"name":"thyroid gland neoplasm","type":"broad"}],"termid":"MONDO:0002108","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0002108"}}}


id: PBO:0086049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, predicted to be palmitoylated; SWAT-GFP, seamless-GFP and mCherry C-terminal fusion proteins localize to the cytosol, while N-terminal GFP fusion protein localizes to the cell periphery; protein abundance increases in response to DNA replication stress","termid":"PBO:0086049"}


id: FYPO:0000188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which DNA repair is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal response to DNA damage stimulus during vegetative growth","termid":"FYPO:0000157"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"abnormal DNA repair","termid":"FYPO:0006567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000293","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000298"],"is_obsolete":false,"name":"abnormal DNA repair during vegetative growth","synonyms":[{"name":"abnormal DNA repair during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000188"}


id: GO:0003066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the secretion of norepinephrine into the bloodstream or released from nerve endings increases the rate of heart muscle contraction.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart rate by chemical signal","termid":"GO:0003062"},{"relation_name":"is_a","term_name":"positive regulation of heart rate","termid":"GO:0010460"},{"relation_name":"part_of","term_name":"positive regulation of heart rate by epinephrine-norepinephrine","termid":"GO:0001996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of heart rate by norepinephrine","synonyms":[{"name":"noradrenaline cardiac chronotropy","type":"exact"},{"name":"noradrenaline regulation of the rate of heart muscle contraction","type":"exact"},{"name":"norepinephrine cardiac chronotropy","type":"exact"},{"name":"positive regulation of heart contraction rate by norepinephrine","type":"related"},{"name":"positive regulation of heart rate by adrenaline","type":"exact"}],"termid":"GO:0003066"}


id: GO:0019381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of atrazine, a triazine ring-containing herbicide.","definition_xrefs":["MetaCyc:PWY-5724","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine catabolic process","termid":"GO:0006598"},{"relation_name":"is_a","term_name":"s-triazine compound catabolic process","termid":"GO:0042204"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrazine catabolic process","secondary_identifiers":["UM-BBD_pathwayID:atr"],"synonyms":[{"name":"atrazine breakdown","type":"exact"},{"name":"atrazine catabolism","type":"exact"},{"name":"atrazine degradation","type":"exact"}],"termid":"GO:0019381"}


id: MONDO:1012819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypotrichosis that occurs in pigs due to a mutation in the HR gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypotrichosis, non-human animal","termid":"MONDO:1012977"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis, HR-related, pig","secondary_identifiers":["OMIA:002229-9823"],"termid":"MONDO:1012819","xrefs":{"Monarch":{"xref_id":"1012819"}}}


id: MONDO:0008023
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This disorder is characterized by muscular atrophy, ataxia, retinitis pigmentosa, and diabetes mellitus.","definition_xrefs":["Orphanet:2579"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"muscular atrophy-ataxia-retinitis pigmentosa-diabetes mellitus syndrome","secondary_identifiers":["UMLS:C0342281","SCTID:237611007","ICD9:728.2","OMIM:158500","MEDGEN:137966","GARD:2417"],"synonyms":[{"name":"Furukawa-Takagi-Nakao syndrome","type":"exact"},{"name":"muscular atrophy ataxia retinitis pigmentosa and diabetes mellitus","type":"related"},{"name":"muscular atrophy, ataxia, retinitis pigmentosa, and diabetes mellitus","type":"related"}],"termid":"MONDO:0008023","xrefs":{"Monarch":{"xref_id":"0008023"}}}


id: PBO:0039489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 20 family member A12, pseudogene","termid":"PBO:0039489"}


id: PBO:0060256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCN upstream transcript","termid":"PBO:0060256"}


id: PBO:0067282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 363, pseudogene","termid":"PBO:0067282"}


id: MONDO:0700036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sex cord-stromal tumor characterized by mixed features of both fibroma and thecoma.","direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrothecoma","secondary_identifiers":["MEDGEN:1668953","UMLS:C4721918"],"termid":"MONDO:0700036","xrefs":{"Monarch":{"xref_id":"0700036"}}}


id: PBO:0117105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFT1 glycolipid translocator homolog","termid":"PBO:0117105"}


id: FYPO:0002006
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of iron ions measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular iron level","synonyms":[{"name":"increased cellular iron ion level","type":"exact"},{"name":"increased cellular iron level during mitotic cell cycle","type":"related"},{"name":"increased cellular iron level during vegetative growth","type":"exact"},{"name":"increased iron accumulation","type":"related"}],"termid":"FYPO:0002006"}


id: MONDO:0003464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or borderline neoplasm that arises from the ovaries and the fallopian tubes. It is characterized by the presence of cystic glandular structures and fibrous tissue.","definition_xrefs":["NCIT:C8985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystadenofibroma","secondary_identifiers":["NCIT:C8987","MESH:D062625","DOID:5482"],"synonyms":[{"name":"cystadenofibroma","type":"exact"}],"termid":"MONDO:0003464","xrefs":{"Monarch":{"xref_id":"0003464"}}}


id: PBO:0084721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; exposed to the mitochondrial matrix; associates with mitochondrial ribosomes; NOT required for respiratory growth; homolog of human Letm1, a protein implicated in Wolf-Hirschhorn syndrome","termid":"PBO:0084721"}


id: PBO:0052899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-10","termid":"PBO:0052899"}


id: MONDO:0004853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gonorrhea","termid":"MONDO:0004277"},{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"gonococcal endophthalmia","secondary_identifiers":["MEDGEN:509208","SCTID:111807001","ICD9:098.42","UMLS:C0153213","DOID:9698"],"termid":"MONDO:0004853","xrefs":{"Monarch":{"xref_id":"0004853"}}}


id: PBO:0045772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extracellular matrix protein 2","termid":"PBO:0045772"}


id: PBO:0044542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-amino acid oxidase activator","termid":"PBO:0044542"}


id: PBO:0003312
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functions coordinately with the protein kinase C pathway","termid":"PBO:0003312"}


id: GO:0071487
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a low light intensity stimulus. Low light intensity is defined as a level of electromagnetic radiation at or below 0.1 micromols/m2.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to low light intensity stimulus","termid":"GO:0009645"},{"relation_name":"is_a","term_name":"cellular response to light intensity","termid":"GO:0071484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to low light intensity stimulus","termid":"GO:0071487"}


id: PBO:0074787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 8","termid":"PBO:0074787"}


id: PBO:0085778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of the AP180 family, involved in clathrin cage assembly; binds Pan1p and clathrin; YAP1801 has a paralog, YAP1802, that arose from the whole genome duplication","termid":"PBO:0085778"}


id: PBO:0056649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 16","termid":"PBO:0056649"}


id: PBO:0031889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allantoicase Dal2 (predicted)","termid":"PBO:0031889"}


id: GO:0003364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lamellipodium, a thin sheetlike extension of the surface of a migrating cell that contributes to the directed self-propelled movement of a mesendodermal cell.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellipodium assembly involved in ameboidal cell migration","termid":"GO:0003363"},{"relation_name":"is_a","term_name":"cellular component assembly involved in morphogenesis","termid":"GO:0010927"},{"relation_name":"part_of","term_name":"cell migration involved in mesendoderm migration","termid":"GO:0090134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"lamellipodium assembly involved in mesendodermal cell migration","termid":"GO:0003364"}


id: MONDO:0957274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia 89, autosomal recessive","secondary_identifiers":["MEDGEN:1841167","UMLS:C5830531","OMIM:620379","DOID:0070458"],"termid":"MONDO:0957274","xrefs":{"Monarch":{"xref_id":"0957274"}}}


id: PBO:0004577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imidazoleglycerol-phosphate synthase (predicted)","termid":"PBO:0004577"}


id: MOD:01532
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N'-hydrogen atom of a histidine residue with the Applied Biosystems iTRAQ8plex-113 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"},{"relation_name":"is_a","term_name":"iTRAQ8plex-113 reporter+balance reagent acylated residue","termid":"MOD:01528"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent N-acylated residue","termid":"MOD:01710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-113 reporter+balance reagent N'-acylated histidine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Representative mass and accurate mass for 113, 114, 116 & 117","type":"related"},{"name":"iTRAQ8plex","type":"related"},{"name":"iTRAQ8plex:13C(7)15N(1)","type":"related"}],"termid":"MOD:01532"}


id: FYPO:0000914
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutamate-ammonia ligase (also known as glutamine synthetase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"normal glutamate-ammonia ligase activity","synonyms":[{"name":"normal GS activity","type":"exact"},{"name":"normal glutamine synthetase activity","type":"exact"},{"name":"normal glutamylhydroxamic synthetase activity","type":"exact"}],"termid":"FYPO:0000914"}


id: PBO:0061189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Val (TAC) 1-1","termid":"PBO:0061189"}


id: PBO:0082667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Ctf19 complex and the COMA subcomplex; involved in kinetochore-microtubule mediated chromosome segregation; binds to centromere DNA; orthologous to human centromere constitutive-associated network (CCAN) subunit CENP-H and fission yeast fta3","termid":"PBO:0082667"}


id: GO:0009466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete class I cytochrome c (obsolete GO:0009466)","synonyms":[{"name":"class I cytochrome c","type":"exact"}],"termid":"GO:0009466"}


id: GO:0035520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of the ubiquitin group from a monoubiquitinated protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein deubiquitination","termid":"GO:0016579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"monoubiquitinated protein deubiquitination","synonyms":[{"name":"monoubiquitinated protein deubiquitinylation","type":"exact"},{"name":"monoubiquitinated protein deubiquitylation","type":"exact"}],"termid":"GO:0035520"}


id: GO:0045142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a DNA triple helix. The formation of triple helical DNA has been evoked in several cellular processes including transcription, replication, and recombination.","definition_xrefs":["PMID:10681538"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"triplex DNA binding","termid":"GO:0045142"}


id: GO:0023061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a signal is secreted or discharged into the extracellular medium from a cellular source.","definition_xrefs":["GOC:mtg_signal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"part_of","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"signal release","synonyms":[{"name":"signal secretion","type":"exact"}],"termid":"GO:0023061"}


id: PBO:0040803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BHLHE40 antisense RNA 1","termid":"PBO:0040803"}


id: MONDO:0007535
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pulmonary emphysema","termid":"MONDO:0004849"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emphysema, hereditary pulmonary","secondary_identifiers":["UMLS:C1851718","OMIM:130700","MESH:C565057","MEDGEN:338765"],"synonyms":[{"name":"emphysema, hereditary pulmonary","type":"exact"}],"termid":"MONDO:0007535","xrefs":{"Monarch":{"xref_id":"0007535"}}}


id: GO:0045715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of low-density lipoprotein particle receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low-density lipoprotein particle receptor biosynthetic process (obsolete GO:0045715)","synonyms":[{"name":"down regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"down-regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"downregulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"inhibition of low-density lipoprotein receptor biosynthetic process","type":"narrow"},{"name":"negative regulation of low-density lipoprotein receptor anabolism","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor biosynthesis","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor biosynthetic process","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor formation","type":"exact"},{"name":"negative regulation of low-density lipoprotein receptor synthesis","type":"exact"}],"termid":"GO:0045715"}


id: PBO:0057843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3156-3","termid":"PBO:0057843"}


id: MONDO:0008020
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple exostoses with spastic tetraparesis","secondary_identifiers":["OMIM:158345","UMLS:C1834724","MESH:C563566","MEDGEN:371889"],"synonyms":[{"name":"Hamann Zanki schimrigk syndrome","type":"related"},{"name":"multiple exostoses with spastic tetraparesis","type":"exact"},{"name":"spasticity multiple exostoses","type":"related"}],"termid":"MONDO:0008020","xrefs":{"Monarch":{"xref_id":"0008020"}}}


id: PBO:0027719
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_lysine_methylation","termid":"PBO:0027719"}


id: GO:0004960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a thromboxane (TXA) to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid receptor activity","termid":"GO:0004954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thromboxane receptor activity","synonyms":[{"name":"TXA receptor activity","type":"exact"}],"termid":"GO:0004960"}


id: MONDO:0003635
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare breast adenocarcinoma with sebaceous differentiation.","definition_xrefs":["NCIT:C40369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"},{"relation_name":"is_a","term_name":"sebaceous adenocarcinoma","termid":"MONDO:0006962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"sebaceous breast carcinoma","secondary_identifiers":["UMLS:C1519207","DOID:5760","MEDGEN:276789"],"synonyms":[{"name":"breast sebaceous adenocarcinoma","type":"exact"},{"name":"sebaceous adenocarcinoma of breast","type":"exact"},{"name":"sebaceous breast carcinoma","type":"exact"}],"termid":"MONDO:0003635","xrefs":{"Monarch":{"xref_id":"0003635"}}}


id: PBO:0027670
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_spindle_assembly_checkpoint_override","termid":"PBO:0027670"}


id: PBO:0030446
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphatase_activity","termid":"PBO:0030446"}


id: PBO:0051688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indolethylamine N-methyltransferase","termid":"PBO:0051688"}


id: PBO:0075489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily E member 2, pseudogene","termid":"PBO:0075489"}


id: GO:0090084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of inclusion body assembly. Inclusion body assembly is the aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular component organization","termid":"GO:0051129"},{"relation_name":"is_a","term_name":"regulation of inclusion body assembly","termid":"GO:0090083"},{"relation_name":"negatively_regulates","term_name":"inclusion body assembly","termid":"GO:0070841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of inclusion body assembly","termid":"GO:0090084"}


id: PBO:0073419
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seizure related 6 homolog","termid":"PBO:0073419"}


id: GO:0031303
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the endosome membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of endosome membrane (obsolete GO:0031303)","synonyms":[{"name":"integral to endosome membrane","type":"narrow"}],"termid":"GO:0031303"}


id: MONDO:0008428
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Septooptic dysplasia (SOD) is a clinically heterogeneous disorder characterized by the classical triad of optic nerve hypoplasia, pituitary hormone abnormalities and midline brain defects.","definition_xrefs":["Orphanet:3157"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic developmental defect of the eye (obsolete MONDO:0015218)","termid":"MONDO:0015218"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome with a central nervous system malformation as major feature (obsolete MONDO:0015220)","termid":"MONDO:0015220"},{"relation_name":"excluded_subClassOf","term_name":"obsolete syndromic optic nerve hypoplasia (obsolete MONDO:0015310)","termid":"MONDO:0015310"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"obsolete disease associated with non-acquired combined pituitary hormone deficiency (obsolete MONDO:0019827)","termid":"MONDO:0019827"},{"relation_name":"excluded_subClassOf","term_name":"obsolete developmental defect of the eye (obsolete MONDO:0020145)","termid":"MONDO:0020145"},{"relation_name":"is_a","term_name":"autosomal genetic disease","termid":"MONDO:0000429"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"septooptic dysplasia","secondary_identifiers":["OMIM:182230","SCTID:7611002","UMLS:C0338503","NCIT:C85063","MESH:D025962","NANDO:1200561","MEDGEN:90926","NANDO:2200820","GARD:7627","DOID:0060857","MedDRA:10067159","NANDO:1200560"],"synonyms":[{"name":"De Morsier syndrome","type":"exact"},{"name":"Growth hormone deficiency with pituitary anomalies","type":"related"},{"name":"SOD","type":"exact"},{"name":"hypopituitarism and septooptic 'dysplasia'","type":"related"},{"name":"pituitary hormone deficiency, combined, 5","type":"related"},{"name":"septo-optic dysplasia","type":"exact"},{"name":"septo-optic dysplasia sequence","type":"exact"},{"name":"septo-optic dysplasia spectrum","type":"related"},{"name":"septo-optic dysplasia with growth hormone deficiency","type":"related"},{"name":"septooptic dysplasia","type":"exact"}],"termid":"MONDO:0008428","xrefs":{"Monarch":{"xref_id":"0008428"}}}


id: GO:0019116
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 6-hydroxynicotine + H2O + O2 = 1-(6-hydroxypyrid-3-yl)-4-(methylamino)butan-1-one + hydrogen peroxide.","definition_xrefs":["GOC:jl","PMID:16095622"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxy-nicotine oxidase activity","termid":"GO:0019116"}


id: PBO:0074033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 20","termid":"PBO:0074033"}


id: MONDO:0003906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A yolk sac tumor that arises from the ovary and is characterized by the presence of extensive differentiation into hepatic tissue.","definition_xrefs":["NCIT:C39989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian yolk sac tumor","termid":"MONDO:0006344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian yolk sac tumor, hepatoid pattern","secondary_identifiers":["MEDGEN:276676","UMLS:C1518748","DOID:6512"],"synonyms":[{"name":"hepatoid pattern ovarian yolk sac tumor","type":"related"},{"name":"hepatoid pattern ovarian yolk sac tumour","type":"related"},{"name":"ovarian yolk Sac tumor, hepatoid pattern","type":"exact"}],"termid":"MONDO:0003906","xrefs":{"Monarch":{"xref_id":"0003906"}}}


id: PBO:0031253
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_cytokinesis","termid":"PBO:0031253"}


id: MONDO:0018820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome is a rare, genetic, neurodegenerative disease characterized by episodic metabolic encephalomyopathic crises (of variable frequency and severity which are frequently precipitated by an acute illness) which manifest with profound muscle weakness, ataxia, seizures, cardiac arrhythmias, rhabdomyolysis with myoglobinuria, elevated plasma creatine kinase, hypoglycemia, lactic acidosis, increased acylcarnitines and a disorientated or comatose state. Global developmental delay, intellectual disability and cortical, pyramidal and cerebellar signs develop with subsequent progressive neurodegeneration causing loss of expressive language and varying degrees of cerebral atrophy.","definition_xrefs":["Orphanet:480864"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"recurrent metabolic encephalomyopathic crises-rhabdomyolysis-cardiac arrhythmia-intellectual disability syndrome","secondary_identifiers":["GARD:13423","OMIM:616878","UMLS:C5567524","NORD:1944","MEDGEN:1798947","DOID:0081386"],"synonyms":[{"name":"MECRCN","type":"exact"},{"name":"TANGO2 Deficiency Disorder","type":"exact"},{"name":"TANGO2 deficiency","type":"exact"},{"name":"metabolic encephalomyopathic crises, recurrent, with rhabdomyolysis, cardiac arrhythmias, and neurodegeneration","type":"exact"},{"name":"transport and golgi organisation protein 2 (TANGO2) deficiency","type":"exact"},{"name":"transport and golgi organization protein 2 (TANGO2) deficiency","type":"exact"}],"termid":"MONDO:0018820","xrefs":{"Monarch":{"xref_id":"0018820"}}}


id: GO:0070947
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"},{"relation_name":"part_of","term_name":"defense response to fungus","termid":"GO:0050832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of fungus","synonyms":[{"name":"neutrophil mediated killing of fungus","type":"exact"}],"termid":"GO:0070947"}


id: PBO:0002773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V0 subunit c (proteolipid subunit)","termid":"PBO:0002773"}


id: MONDO:0005530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders related or resulting from abuse or mis-use of opioids.","definition_xrefs":["MESH:D009293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opiate dependence","secondary_identifiers":["ICD9:304.0","SCTID:75544000","EFO:0005611","DOID:2559","ICD10CM:F11.2","UMLS:C0524662","ICD9:304.00","MEDGEN:99372"],"synonyms":[{"name":"narcotism","type":"related"},{"name":"opioid dependence","type":"exact"},{"name":"opioid type dependence","type":"exact"}],"termid":"MONDO:0005530","xrefs":{"Monarch":{"xref_id":"0005530"}}}


id: null:local:computer file
data:
  {"annotation_feature_type":"gene","cv_name":"null","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"computer file","termid":"null:local:computer file"}


id: FYPO:0004056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is decreased, and some of the protein is present in the cytoplasm instead.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"protein mislocalized to cytoplasm during vegetative growth","termid":"FYPO:0000783"},{"relation_name":"is_a","term_name":"decreased protein localization to nucleus during vegetative growth","termid":"FYPO:0001514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm","synonyms":[{"name":"decreased protein localisation to nucleus, with protein mislocalised to cytoplasm","type":"exact"},{"name":"decreased protein localization in nucleus, with protein mislocalized to cytoplasm","type":"exact"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to nucleus, with protein mislocalized to cytoplasm, during vegetative growth","type":"exact"},{"name":"reduced protein localization to nucleus, with protein mislocalized to cytoplasm","type":"exact"}],"termid":"FYPO:0004056"}


id: MONDO:1010508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebral amyloid angiopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral amyloid angiopathy, non-human animal","termid":"MONDO:1010028"},{"relation_name":"is_a","term_name":"amyloidosis, dog","termid":"MONDO:1011467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral amyloid angiopathy, dog","secondary_identifiers":["OMIA:002138-9615"],"termid":"MONDO:1010508","xrefs":{"Monarch":{"xref_id":"1010508"}}}


id: GO:0061607
data:
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id: PBO:0054005
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1333","termid":"PBO:0054005"}


id: GO:0016260
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id: _global:hyperparasite_of
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  {"annotation_feature_type":"gene","cv_name":"external","definition":"x is a hyperparasite of y iff x is a parasite of a parasite of the target organism y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_host","termid":"_global:has_host"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperparasite_of","secondary_identifiers":["RO:0002553"],"synonyms":[{"name":"epiparasite of","type":"related"},{"name":"hyperparasitoid of","type":"narrow"}],"termid":"_global:hyperparasite_of"}


id: GO:0018060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidative deamination of N-terminal peptidyl-cysteine to form pyruvic acid with an amide bond between its 1-carboxyl group and the N-terminal residue.","definition_xrefs":["RESID:AA0127"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-cysteine deamination (obsolete GO:0018060)","termid":"GO:0018060"}


id: PBO:0064523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase III subunit D","termid":"PBO:0064523"}


id: PBO:0119978
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM171B and ITGAV antisense RNA 1","termid":"PBO:0119978"}


id: MONDO:0024378
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A circadian sleep disorder characterized by bedtime and wake-up time much earlier than normal, although sleep quality is normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"circadian rhythm sleep disorder","termid":"MONDO:0024361"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circadian rhythm sleep disorder, advanced sleep phase type","secondary_identifiers":["SCTID:31537005","ICD10CM:G47.22","UMLS:C0751758","MEDGEN:199728","ICD9:327.32"],"synonyms":[{"name":"ASPS","type":"broad"},{"name":"advanced sleep phase syndrome","type":"broad"},{"name":"circadian rhythm sleep disorder, advanced sleep phase","type":"related"},{"name":"circadian rhythm sleep disorder, advanced sleep phase type","type":"exact"},{"name":"sleep-wake schedule disorder, advanced phase type","type":"exact"}],"termid":"MONDO:0024378","xrefs":{"Monarch":{"xref_id":"0024378"}}}


id: GO:0044770
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id: PBO:0046867
data:
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id: GO:1990906
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium-like cell projection emanating from the inner segment and running alongside the outer segment of photoreceptors.","definition_xrefs":["PMID:25125189","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"accessory outer segment","termid":"GO:1990906"}


id: PBO:0044347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CYCS pseudogene 32","termid":"PBO:0044347"}


id: PBO:0053588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 613","termid":"PBO:0053588"}


id: GO:0060030
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed migration of individual cells and small groups of cells toward the dorsal midline during gastrulation. This process does not require cell rearrangement.","definition_xrefs":["GOC:dgf","GOC:dph","PMID:12062082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in gastrulation","termid":"GO:0042074"},{"relation_name":"part_of","term_name":"convergent extension involved in gastrulation","termid":"GO:0060027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal convergence","termid":"GO:0060030"}


id: GO:0009170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine deoxyribonucleoside monophosphate, a compound consisting of a purine base linked to a deoxyribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside monophosphate metabolic process","termid":"GO:0009126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"purine deoxyribonucleoside monophosphate metabolic process","synonyms":[{"name":"purine deoxyribonucleoside monophosphate metabolism","type":"exact"}],"termid":"GO:0009170"}


id: FYPO:0003169
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id: PBO:0089261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic alanine-tRNA ligase Ala1","termid":"PBO:0089261"}


id: PBO:0002949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding protein Fet5 (predicted)","termid":"PBO:0002949"}


id: PBO:0052029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Jupiter microtubule associated homolog 2","termid":"PBO:0052029"}


id: PBO:0028030
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_replication","termid":"PBO:0028030"}


id: GO:0001634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that interacts with pituitary adenylate cyclase-activating polypeptide.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"pituitary adenylate cyclase-activating polypeptide receptor activity","secondary_identifiers":["GO:0016522"],"synonyms":[{"name":"PACAP receptor","type":"exact"},{"name":"pituitary adenylate cyclase activating polypeptide receptor","type":"exact"},{"name":"pituitary adenylate cyclase activating protein receptor activity","type":"exact"},{"name":"pituitary adenylate cyclase-activating peptide receptor activity","type":"related"},{"name":"pituitary adenylyl cyclase activating protein receptor activity","type":"exact"}],"termid":"GO:0001634"}


id: PBO:0113749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SDHC pseudogene 5","termid":"PBO:0113749"}


id: PBO:0041238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 100","termid":"PBO:0041238"}


id: MONDO:0008331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Apparent optic disk swelling in the absence of increased intracranial pressure.","gene_count":0,"genotype_count":0,"name":"obsolete pseudopapilledema (obsolete MONDO:0008331)","secondary_identifiers":["OMIM:177800","Orphanet:519339","SCTID:57138009","ICD9:377.24","MESH:C562401","DOID:1392"],"synonyms":[{"name":"crowded optic disk","type":"related"},{"name":"obsolete pseudopapilledema (disease)","type":"exact"},{"name":"pseudopapilledema","type":"exact"}],"termid":"MONDO:0008331","xrefs":{"Monarch":{"xref_id":"0008331"}}}


id: PBO:0085927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of the seripauperin multigene family encoded mainly in subtelomeric regions; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole; identical to Pau21p; encodes two proteins that are translated from two different start codons","termid":"PBO:0085927"}


id: PBO:0060976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroglobin","termid":"PBO:0060976"}


id: GO:0035224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the genital disc. An anterior and posterior compartment form in each of the three genital disc primoridia (the female genital disc primordium, the male genital disc primordium and the anal primordium).","definition_xrefs":["PMID:11494318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"genital disc pattern formation","termid":"GO:0035221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"genital disc anterior/posterior pattern formation","termid":"GO:0035224"}


id: PBO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COP9/signalosome complex subunit Csn4","termid":"PBO:0000803"}


id: PR:Q10145
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nab3 gene.","definition_xrefs":["UniProtKB:Q10145","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RNA-binding protein C3H8.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.09c","synonyms":[{"name":"Spom972h-nab3","type":"exact"}],"termid":"PR:Q10145"}


id: MONDO:1011929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder, non-human animal","termid":"MONDO:0700104"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guttural pouch tympany, non-human animal","secondary_identifiers":["OMIA:001408"],"termid":"MONDO:1011929","xrefs":{"Monarch":{"xref_id":"1011929"}}}


id: GO:0004985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an opioid (any narcotic derived from or resembling opium), and transmitting the signal across the membrane by activating an associated G-protein.","definition_xrefs":["GOC:bf","GOC:ai","PMID:20494127"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"G protein-coupled opioid receptor activity","synonyms":[{"name":"opioid receptor activity","type":"broad"}],"termid":"GO:0004985"}


id: GO:1902777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 6-sulfoquinovose(1-).","definition_xrefs":["PMID:24463506","GOC:dph","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic acid catabolic process","termid":"GO:0016054"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"},{"relation_name":"is_a","term_name":"6-sulfoquinovose(1-) metabolic process","termid":"GO:1902776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"6-sulfoquinovose(1-) catabolic process","synonyms":[{"name":"6-sulfoquinovose(1-) breakdown","type":"exact"},{"name":"6-sulfoquinovose(1-) catabolism","type":"exact"},{"name":"6-sulfoquinovose(1-) degradation","type":"exact"}],"termid":"GO:1902777"}


id: GO:0030776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + (RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline = S-adenosyl-L-homocysteine + N-methyl-(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline.","definition_xrefs":["EC:2.1.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline N-methyltransferase activity","secondary_identifiers":["MetaCyc:2.1.1.115-RXN","RHEA:13005"],"synonyms":[{"name":"(RS)-tetrahydrobenzylisoquinoline N-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:(RS)-1-benzyl-1,2,3,4-tetrahydroisoquinoline N-methyltransferase activity","type":"related"},{"name":"norreticuline N-methyltransferase activity","type":"related"}],"termid":"GO:0030776"}


id: PBO:0066159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP8 pseudogene 2","termid":"PBO:0066159"}


id: PBO:0086348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTEN homolog with no demonstrated inositol lipid phosphatase activity; plays a role in normal sporulation; homolog of human tumor suppressor gene PTEN/MMAC1/TEP1 and fission yeast ptn1","termid":"PBO:0086348"}


id: PR:P17871
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tbp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P17871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box-binding protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29E6.08","synonyms":[{"name":"Spom972h-tbp1","type":"exact"},{"name":"TATA sequence-binding protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TATA-binding factor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TATA-box factor (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TBP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"transcription initiation factor TFIID TBP subunit (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P17871"}


id: PBO:0042651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y like 2","termid":"PBO:0042651"}


id: GO:0048917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the posterior lateral line ganglion over time, from its formation to the mature structure. The posterior lateral line ganglion develops from cranial ectodermal placodes situated behind the ear.","definition_xrefs":["ISBN:0125296509","ISBN:0387968377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line ganglion development","termid":"GO:0048890"},{"relation_name":"part_of","term_name":"posterior lateral line system development","termid":"GO:0048915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line ganglion development","synonyms":[{"name":"gPLL development","type":"exact"}],"termid":"GO:0048917"}


id: MONDO:0009337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hennekam syndrome in which the cause of the disease is a mutation in the CCBE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hennekam syndrome","termid":"MONDO:0016256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Hennekam lymphangiectasia-lymphedema syndrome 1","secondary_identifiers":["UMLS:C4012050","GARD:15181","OMIM:235510","MEDGEN:860487"],"synonyms":[{"name":"CCBE1 Hennekam syndrome","type":"exact"},{"name":"HKLLS1","type":"related"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome","type":"related"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome 1","type":"exact"},{"name":"Hennekam lymphangiectasia-lymphedema syndrome type 1","type":"exact"},{"name":"Hennekam syndrome caused by mutation in CCBE1","type":"exact"},{"name":"lymphatic dysplasia, generalised","type":"related"},{"name":"lymphatic dysplasia, generalized","type":"related"}],"termid":"MONDO:0009337","xrefs":{"Monarch":{"xref_id":"0009337"}}}


id: PBO:0077125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMP metallopeptidase inhibitor 4","termid":"PBO:0077125"}


id: MONDO:0011117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iris pigment epithelium anomalies","secondary_identifiers":["OMIM:601616","MEDGEN:357091","UMLS:C1866608","MESH:C566651"],"synonyms":[{"name":"cysts of iris pigment epithelium","type":"related"},{"name":"iris pigment epithelium anomalies","type":"exact"},{"name":"ruffles and cysts of iris pigment epithelium","type":"related"}],"termid":"MONDO:0011117","xrefs":{"Monarch":{"xref_id":"0011117"}}}


id: PR:O75001
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03822","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.03c","secondary_identifiers":["UniProtKB:O75001"],"synonyms":[{"name":"Spom972h-MCM7","type":"exact"},{"name":"minichromosome maintenance protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O75001"}


id: PBO:0046747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 3 like 2","termid":"PBO:0046747"}


id: GO:0007539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transmission of information about sexual status from the initial, general, determination to signals specific to the soma.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary sex determination","termid":"GO:0007538"},{"relation_name":"part_of","term_name":"somatic sex determination","termid":"GO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary sex determination, soma","termid":"GO:0007539"}


id: FYPO:0006380
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the vacuole is normal (i.e. indistinguishable from wild type) when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"},{"relation_name":"is_a","term_name":"normal protein localization","termid":"FYPO:0003627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"normal protein localization to vacuole during nitrogen starvation","synonyms":[{"name":"normal protein localisation to vacuole during nitrogen starvation","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen depletion","type":"exact"},{"name":"normal protein localization to vacuole during nitrogen deprivation","type":"exact"}],"termid":"FYPO:0006380"}


id: MONDO:0000954
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cancer involving a Meckel's diverticulum.","definition_xrefs":["MONDO:patterns/cancer"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ileum cancer","termid":"MONDO:0000955"},{"relation_name":"is_a","term_name":"Meckel diverticulum neoplasm","termid":"MONDO:0021082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"Meckel diverticulum cancer","secondary_identifiers":["ICD9:152.3","MEDGEN:509288","SCTID:187752007","UMLS:C0153429","DOID:10152"],"synonyms":[{"name":"Meckel diverticulum cancer","type":"exact"},{"name":"Meckel's diverticulum cancer","type":"exact"},{"name":"cancer of Meckel's diverticulum","type":"exact"},{"name":"malignant Meckel's diverticulum neoplasm","type":"exact"},{"name":"malignant neoplasm of Meckel's diverticulum","type":"exact"}],"termid":"MONDO:0000954","xrefs":{"Monarch":{"xref_id":"0000954"}}}


id: PR:P54280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mismatch repair endonuclease PMS2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01675","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA mismatch repair protein pms1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC19G12.02c","secondary_identifiers":["UniProtKB:P54280"],"synonyms":[{"name":"Spom972h-PMS2","type":"exact"}],"termid":"PR:P54280"}


id: PBO:0091225
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SODium","termid":"PBO:0091225"}


id: PBO:0071526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 29","termid":"PBO:0071526"}


id: PBO:0057721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-6","termid":"PBO:0057721"}


id: GO:0009188
data:
  {"annotated_genes":["SJAG_02038","SJAG_00779"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[82363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[82362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate biosynthetic process","termid":"GO:0009133"},{"relation_name":"is_a","term_name":"ribonucleoside diphosphate metabolic process","termid":"GO:0009185"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00779":null,"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"ribonucleoside diphosphate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ribonucleoside diphosphate anabolism","type":"exact"},{"name":"ribonucleoside diphosphate biosynthesis","type":"exact"},{"name":"ribonucleoside diphosphate formation","type":"exact"},{"name":"ribonucleoside diphosphate synthesis","type":"exact"}],"termid":"GO:0009188","terms_by_termid":{"GO:0006172":null,"GO:0006225":null,"GO:0046705":null}}


id: MONDO:0023174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete follicular lymphoreticuloma (obsolete MONDO:0023174)","termid":"MONDO:0023174","xrefs":{"Monarch":{"xref_id":"0023174"}}}


id: GO:0036506
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintaining a protein in an unfolded, soluble state.","definition_xrefs":["GOC:bf","PMID:21636303","GOC:BHF","GOC:nc","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein stability","termid":"GO:0031647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of unfolded protein","termid":"GO:0036506"}


id: MONDO:0021299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the extrahepatic bile duct.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct carcinoma in situ","termid":"MONDO:0000374"},{"relation_name":"is_a","term_name":"extrahepatic bile duct carcinoma","termid":"MONDO:0003090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma in situ of extrahepatic bile duct","secondary_identifiers":["NCIT:C4442","UMLS:C0345914","SCTID:92589000","MEDGEN:138028"],"synonyms":[{"name":"carcinoma in situ of extrahepatic bile duct","type":"exact"},{"name":"carcinoma in situ of extrahepatic bile ducts","type":"exact"},{"name":"carcinoma in situ of extrahepatic biliary ducts","type":"exact"},{"name":"carcinoma in situ of the extrahepatic bile duct","type":"exact"},{"name":"extrahepatic bile duct cancer stage 0","type":"exact"},{"name":"extrahepatic bile duct carcinoma in situ","type":"exact"},{"name":"extrahepatic bile duct in situ carcinoma","type":"exact"},{"name":"extrahepatic biliary duct carcinoma in situ","type":"exact"},{"name":"stage 0 carcinoma of extrahepatic bile duct","type":"exact"},{"name":"stage 0 carcinoma of the extrahepatic bile duct","type":"exact"},{"name":"stage 0 extrahepatic bile duct cancer","type":"exact"},{"name":"stage 0 extrahepatic bile duct carcinoma","type":"exact"},{"name":"stage 0 extrahepatic bile duct carcinoma in situ","type":"exact"}],"termid":"MONDO:0021299","xrefs":{"Monarch":{"xref_id":"0021299"}}}


id: PBO:0055603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3041","termid":"PBO:0055603"}


id: PR:O94520
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- emc4 gene.","definition_xrefs":["UniProtKB:O94520","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1281.03c","synonyms":[{"name":"Spom972h-emc4","type":"exact"}],"termid":"PR:O94520"}


id: PomGeneEx:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","definition":"A gene expression qualifier that indicates that an RNA is present at the same level under two or more sets of conditions or over a time course.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"constant","termid":"PomGeneEx:0000007"},{"relation_name":"is_a","term_name":"RNA expression level","termid":"PomGeneEx:0000009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA level constant","synonyms":[{"name":"RNA expression constant","type":"exact"},{"name":"constant RNA level","type":"exact"}],"termid":"PomGeneEx:0000016"}


id: PR:O42866
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A carbonyl reductase family member 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01330","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-oxoacyl-[acyl-carrier-protein] reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.02","secondary_identifiers":["UniProtKB:O42866"],"synonyms":[{"name":"3-ketoacyl-acyl carrier protein reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CBR4","type":"exact"}],"termid":"PR:O42866"}


id: PBO:0117182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DENND1A antisense RNA 1","termid":"PBO:0117182"}


id: MONDO:0007718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hepatocellular adenoma","termid":"MONDO:0018902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatic adenomas, familial","secondary_identifiers":["MESH:C564190","UMLS:C1840646","MEDGEN:374515","OMIM:142330","DOID:0111366"],"synonyms":[{"name":"hepatic adenoma, somatic","type":"exact"},{"name":"hepatic adenomas, familial","type":"exact"},{"name":"liver cell adenomas, familial","type":"related"}],"termid":"MONDO:0007718","xrefs":{"Monarch":{"xref_id":"0007718"}}}


id: MOD:00106
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to L-threonine amide.","definition_xrefs":["RESID:AA0097","PubMed:1390774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine amide","synonyms":[{"name":"(2S,3R)-2-amino-3-hydroxybutanamide","type":"exact"},{"name":"L-threonine amide","type":"exact"},{"name":"MOD_RES Threonine amide","type":"exact"},{"name":"ThrN","type":"exact"},{"name":"amidated L-threonine","type":"exact"},{"name":"threoninamide","type":"exact"}],"termid":"MOD:00106"}


id: PBO:0066715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 12","termid":"PBO:0066715"}


id: GO:0047224
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-N-acetyl-D-galactosalaminyl-[protein] + UDP-N-acetyl-D-glucosamine = 3-O-N-acetyl-beta-D-glucosaminyl-1,3-N-acetyl-D-galactosaminyl-[protein] + UDP. Linkage of the glycan to the protein occurs via the oxygen atom in the side chain of an L-serine or L-threonine residue.","definition_xrefs":["EC:2.4.1.147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016757","GO:0140096","GO:0003674"],"is_obsolete":false,"name":"acetylgalactosaminyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.147-RXN"],"synonyms":[{"name":"O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase III activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to N-acetyl-D-galactosaminyl-R) beta-1,3-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"core 3-beta-GlcNAc-transferase activity","type":"related"},{"name":"core 3beta-GlcNAc-transferase activity","type":"related"},{"name":"mucin core 3 beta3-GlcNAc-transferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta(1->3)-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0047224"}


id: PBO:0075225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 2 pseudogene 2","termid":"PBO:0075225"}


id: PBO:0003357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine synthase","termid":"PBO:0003357"}


id: PBO:0031677
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_cell_cycle_arrest_in_response_to_pheromone","termid":"PBO:0031677"}


id: GO:0046592
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative degradation or interconversion of polyamines.","definition_xrefs":["PMID:1567380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polyamine oxidase activity","synonyms":[{"name":"1-N-acetylspermidine:oxygen oxidoreductase (deaminating)","type":"narrow"},{"name":"N1-acetylspermidine:oxygen oxidoreductase (deaminating)","type":"narrow"}],"termid":"GO:0046592"}


id: PATO:0000448
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000448 high percentage (obsolete PATO:0000448)","termid":"PATO:0000448"}


id: PBO:0041476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 11 open reading frame 65","termid":"PBO:0041476"}


id: PBO:0087782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit VII of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain","termid":"PBO:0087782"}


id: PBO:0058674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6802","termid":"PBO:0058674"}


id: PBO:0001504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon subunit Dpb3","termid":"PBO:0001504"}


id: PBO:0047897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(p13)","termid":"PBO:0047897"}


id: PBO:0065006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRDM10 divergent transcript","termid":"PBO:0065006"}


id: PBO:0053039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"La ribonucleoprotein 1B","termid":"PBO:0053039"}


id: MONDO:0014661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex (EBS) characterized by generalized skin blistering associated with severe nail dystrophy.","definition_xrefs":["OMIM:616487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"},{"relation_name":"is_a","term_name":"PLEC-related muscular dystrophy-epidermolysis bullosa simplex spectrum disorder","termid":"MONDO:1060109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex with nail dystrophy","secondary_identifiers":["MEDGEN:906476","UMLS:C4225309"],"synonyms":[{"name":"EBSND","type":"related"},{"name":"epidermolysis bullosa simplex 5D, generalised intermediate, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex 5D, generalized intermediate, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex with nail dystrophy","type":"exact"}],"termid":"MONDO:0014661","xrefs":{"Monarch":{"xref_id":"0014661"}}}


id: PBO:0055548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2984","termid":"PBO:0055548"}


id: PBO:0078581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 54","termid":"PBO:0078581"}


id: GO:1904350
data:
  {"annotated_genes":["SJAG_04990"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904352"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein catabolic process in the vacuole.","definition_xrefs":["GOC:rl","GOC:TermGenie","PMID:25635054","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"regulates","term_name":"protein catabolic process in the vacuole","termid":"GO:0007039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of protein catabolic process in the vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of vacuolar protein breakdown","type":"related"},{"name":"regulation of vacuolar protein catabolic process","type":"related"},{"name":"regulation of vacuolar protein catabolism","type":"related"},{"name":"regulation of vacuolar protein degradation","type":"related"}],"termid":"GO:1904350","terms_by_termid":{"GO:1904352":null}}


id: PBO:0114505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein, GPI anchored","termid":"PBO:0114505"}


id: PBO:0086750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; predicted to encode a triose phosphate transporter subfamily member based on phylogenetic analysis; similar to YOR307C/SLY41; deletion mutant has a respiratory growth defect","termid":"PBO:0086750"}


id: PATO:0000388
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000388 intensity value (obsolete PATO:0000388)","termid":"PATO:0000388"}


id: MONDO:0001881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare acute life-threatening systemic bacterial noncontagious illness caused by exotoxins from bacteria of either the Streptococcus pyogenes or Staphylococcus aureus type. It is characterized by high fever, hypotension, rash, multi-organ dysfunction, and cutaneous desquamation during the early convalescent period. The toxins affect the host immune system, causing an exuberant and pathological host inflammatory response. Laboratory findings include leukocytosis, elevated prothrombin time, hypoalbuminemia, hypocalcemia, and pyuria.","definition_xrefs":["NCIT:C35498","Wikipedia:Toxic_shock_syndrome"],"direct_ancestors":[{"relation_name":"is_a","term_name":"commensal bacterial infectious disease","termid":"MONDO:0000315"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxic shock syndrome","secondary_identifiers":["MEDGEN:109414","ICD9:040.82","NORD:1782","UMLS:C0600327","DOID:14115","Orphanet:36234","ICD10CM:A48.3","icd11.foundation:114886962","MESH:D012772","GARD:9560","SCTID:18504008"],"synonyms":[{"name":"TSS","type":"exact"},{"name":"TSS, toxic shock syndrome","type":"exact"},{"name":"bacterial TSS","type":"exact"},{"name":"bacterial toxic-shock syndrome","type":"exact"},{"name":"shock syndrome (TSS), toxic","type":"exact"},{"name":"staphylococcal toxic shock syndrome","type":"related"},{"name":"syndrome (TSS), toxic shock","type":"exact"},{"name":"toxic shock","type":"exact"},{"name":"toxic shock syndrome","type":"exact"},{"name":"toxic shock syndrome, (TSS)","type":"exact"}],"termid":"MONDO:0001881","xrefs":{"Monarch":{"xref_id":"0001881"}}}


id: PBO:0044061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin F","termid":"PBO:0044061"}


id: MONDO:0019087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the intrahepatic biliary tree (intrahepatic cholangiocarcinoma) or from the junction, or adjacent to the junction, of the right and left hepatic ducts (hilar cholangiocarcinoma). Grossly, the malignant lesions are solid, nodular, and grayish. Morphologically, the vast majority of cases are adenocarcinomas. Signs and symptoms include malaise, weight loss, right upper quadrant abdominal pain, and night sweats. Early detection is difficult and the prognosis is generally poor.","definition_xrefs":["NCIT:C4436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma of gallbladder and extrahepatic biliary tract","termid":"MONDO:0018536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"cholangiocarcinoma","secondary_identifiers":["Orphanet:70567","UMLS:C0206698","MedDRA:10008593","NORD:926","SCTID:312104005","ICDO:8160/3","GARD:9304","MedDRA:10004593","MESH:D018281","DOID:4947","EFO:0005221","icd11.foundation:2110597275","MEDGEN:60210","ONCOTREE:CHOL"],"synonyms":[{"name":"CC","type":"exact"},{"name":"CCA","type":"exact"},{"name":"Cholangiocar.- intra/extrahepatic","type":"exact"},{"name":"Cholangiocellular carcinoma","type":"exact"},{"name":"adult primary cholangiocarcinoma","type":"exact"},{"name":"adult primary cholangiocellular carcinoma","type":"exact"},{"name":"bile duct cancer","type":"broad"},{"name":"cholangiocarcinoma","type":"exact"},{"name":"cholangiocarcinoma, intrahepatic and extrahepatic bile ducts (adenocarcinoma)","type":"exact"},{"name":"cholangiocarcinoma, malignant","type":"exact"},{"name":"cholangiosarcoma","type":"exact"},{"name":"intrahepatic bile duct cancer (cholangiocarcinoma)","type":"broad"}],"termid":"MONDO:0019087","xrefs":{"Monarch":{"xref_id":"0019087"}}}


id: GO:0090643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The radial pattern formation process that results in the formation of flowers around a central axis in an inflorescence meristem.","definition_xrefs":["PMID:25352850"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllotactic patterning","termid":"GO:0060771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inflorescence phyllotactic patterning","termid":"GO:0090643"}


id: PBO:0073274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEPTIN9 divergent transcript","termid":"PBO:0073274"}


id: PBO:0067647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 822, pseudogene","termid":"PBO:0067647"}


id: PBO:0034553
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CRE_promoter","termid":"PBO:0034553"}


id: MONDO:1011463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Alzheimer disease, non-human animal","termid":"MONDO:1011443"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, sheep","secondary_identifiers":["OMIA:000033-9940"],"termid":"MONDO:1011463","xrefs":{"Monarch":{"xref_id":"1011463"}}}


id: GO:0052544
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which callose is transported to, and/or maintained in, the cell wall during the defense response. Callose is a linear 1,3-beta-d-glucan formed from UDP-glucose and is found in certain plant cell walls.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"defense response by cell wall thickening","termid":"GO:0052482"},{"relation_name":"is_a","term_name":"defense response by callose deposition","termid":"GO:0052542"},{"relation_name":"is_a","term_name":"callose deposition in cell wall","termid":"GO:0052543"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0071554"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"defense response by callose deposition in cell wall","synonyms":[{"name":"callose deposition in cell wall during defense response","type":"related"},{"name":"callose localization in cell wall during defense response","type":"exact"},{"name":"cell wall callose deposition during defense response","type":"exact"},{"name":"cell wall callose localization during defense response","type":"exact"}],"termid":"GO:0052544"}


id: GO:0160210
data:
  {"annotated_genes":["SJAG_04305"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103913],"is_not":false,"summary":null,"term":"GO:0160210"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + succinyl-CoA = CoA + O-succinyl-L-serine.","definition_xrefs":["RHEA:52820","PMID:28581482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-succinyltransferase activity","termid":"GO:0016750"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"L-serine O-succinyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0160210","terms_by_termid":{"GO:0160210":null}}


id: PBO:0067099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 140, pseudogene","termid":"PBO:0067099"}


id: PR:O14194
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ggt2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-glutamyltranspeptidase 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.06c","synonyms":[{"name":"Spom972h-ggt2","type":"exact"},{"name":"gamma-glutamyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutathione hydrolase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14194"}


id: GO:0071159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of a homo- or heterodimer of members of a family of structurally related proteins that contain a conserved N-terminal region called the Rel homology domain (RHD). In the nucleus, NF-kappaB complexes act as transcription factors. In unstimulated cells, NF-kappaB dimers are sequestered in the cytoplasm by IkappaB monomers; signals that induce NF-kappaB activity cause degradation of IkappaB, allowing NF-kappaB dimers to translocate to the nucleus and induce gene expression.","definition_xrefs":["ISBN:0849327946"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"NF-kappaB complex","termid":"GO:0071159"}


id: PBO:0071188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 29","termid":"PBO:0071188"}


id: GO:1903295
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutamate secretion, neurotransmission.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:16782817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glutamate secretion","termid":"GO:0014050"},{"relation_name":"is_a","term_name":"negative regulation of neurotransmitter secretion","termid":"GO:0046929"},{"relation_name":"is_a","term_name":"negative regulation of synaptic transmission, glutamatergic","termid":"GO:0051967"},{"relation_name":"is_a","term_name":"regulation of glutamate secretion, neurotransmission","termid":"GO:1903294"},{"relation_name":"negatively_regulates","term_name":"glutamate secretion, neurotransmission","termid":"GO:0061535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of glutamate secretion, neurotransmission","synonyms":[{"name":"down regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"down-regulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"downregulation of glutamate secretion, neurotransmission","type":"exact"},{"name":"inhibition of glutamate secretion, neurotransmission","type":"narrow"}],"termid":"GO:1903295"}


id: PBO:0089850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing coactivator Srm160","termid":"PBO:0089850"}


id: _global:occurs_in
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"p occurs_in c if and only if all of the participants of p are part_of c.","definition_xrefs":["BFO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"occurs_in","secondary_identifiers":["BFO:0000066"],"synonyms":[{"name":"in","type":"related"}],"termid":"_global:occurs_in"}


id: MONDO:0012028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autoimmune disease","termid":"MONDO:0007179"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune disease, susceptibility to, 3","secondary_identifiers":["UMLS:C1842112","MEDGEN:333993","OMIM:608392"],"synonyms":[{"name":"AIS3","type":"exact"},{"name":"autoimmune disease susceptibility locus, chromosome 8-related","type":"related"},{"name":"autoimmune disease, susceptibility to, 3","type":"exact"},{"name":"vitiligo-associated multiple autoimmune disease susceptibility 4","type":"related"}],"termid":"MONDO:0012028","xrefs":{"Monarch":{"xref_id":"0012028"}}}


id: PBO:0070738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 8","termid":"PBO:0070738"}


id: MONDO:0017773
data:
  {"annotated_genes":["SJAG_03162"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007620"},{"annotations":[87401],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009515"}]},"cv_name":"mondo","definition":"A metabolic disorder characterized by deficiency of high density (alpha) lipoprotein in the blood.","definition_xrefs":["NCIT:C84774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03162":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypoalphalipoproteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:57731","UMLS:C0151691","NANDO:2200605","icd11.foundation:1731667610","MedDRA:10065156","GARD:18801","MESH:D052456","Orphanet:31153","SCTID:190785000"],"termid":"MONDO:0017773","terms_by_termid":{"MONDO:0007620":null,"MONDO:0009515":null},"xrefs":{"Monarch":{"xref_id":"0017773"}}}


id: GO:0060340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a type I interferon-mediated signaling pathway.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"positive regulation of innate immune response","termid":"GO:0045089"},{"relation_name":"is_a","term_name":"regulation of type I interferon-mediated signaling pathway","termid":"GO:0060338"},{"relation_name":"positively_regulates","term_name":"type I interferon-mediated signaling pathway","termid":"GO:0060337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of type I interferon-mediated signaling pathway","synonyms":[{"name":"positive regulation of type I interferon-mediated signalling pathway","type":"exact"}],"termid":"GO:0060340"}


id: GO:0097685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell surface furrow (or groove) found on a dinoflagellate apex. It typically loops around the apex.","definition_xrefs":["GOC:at","Wikipedia:Dinoflagellate#Morphology","PMID:20561119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface furrow","termid":"GO:0097610"},{"relation_name":"part_of","term_name":"dinoflagellate epicone","termid":"GO:0097613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0009986"}],"interesting_parent_ids":["GO:0009986","GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical groove","synonyms":[{"name":"apical groove","type":"broad"}],"termid":"GO:0097685"}


id: GO:0021978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that creates areas within the forebrain that will direct the behavior of cell migration in differentiation as the telencephalon develops.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:mgi_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"part_of","term_name":"telencephalon development","termid":"GO:0021537"},{"relation_name":"part_of","term_name":"forebrain regionalization","termid":"GO:0021871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"telencephalon regionalization","termid":"GO:0021978"}


id: PBO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3 like 3'-5' exoribonuclease 2","termid":"PBO:0045030"}


id: CHEBI:18291
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"manganese atom","termid":"CHEBI:18291"}


id: PBO:0084400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lunapark family member involved in ER network formation; regulates the ER asymmetry-induced inheritance block during ER stress; localizes to ER junctions and this localization is regulated by the yeast atlastin ortholog Sey1p; required for reticulophagy where it is proposed to stabilize the actin-dependent remodeling of the ER; interacts with the reticulon protein Rtn1p; induced in response to the DNA-damaging agent MMS","termid":"PBO:0084400"}


id: MONDO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"inborn disorder of purine or pyrimidine metabolism","termid":"MONDO:0019254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019254"],"is_obsolete":false,"name":"phosphoribosylpyrophosphate synthetase deficiency","secondary_identifiers":["HGNC:9462","SCTID:124343001","UMLS:C1291401","MESH:C537897","MEDGEN:220944","MESH:C535995"],"synonyms":[{"name":"PRPP synthetase deficiency","type":"related"},{"name":"deafness hyperuricemia neurologic ataxia","type":"exact"}],"termid":"MONDO:0043176","xrefs":{"Monarch":{"xref_id":"0043176"}}}


id: PBO:0073162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC62 antisense RNA 1","termid":"PBO:0073162"}


id: PBO:0055741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LMX1A antisense RNA 1","termid":"PBO:0055741"}


id: PBO:0038937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 5 (class III), chi polypeptide","termid":"PBO:0038937"}


id: GO:2000112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellular macromolecule biosynthetic process.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellular macromolecule biosynthetic process (obsolete GO:2000112)","synonyms":[{"name":"regulation of cellular biopolymer biosynthetic process","type":"exact"},{"name":"regulation of cellular macromolecule anabolism","type":"exact"},{"name":"regulation of cellular macromolecule biosynthesis","type":"exact"},{"name":"regulation of cellular macromolecule formation","type":"exact"},{"name":"regulation of cellular macromolecule synthesis","type":"exact"}],"termid":"GO:2000112"}


id: GO:0038145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cytokine macrophage colony-stimulating factor (M-CSF) to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:12138890","Wikipedia:Macrophage_colony-stimulating_factor","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to macrophage colony-stimulating factor stimulus","termid":"GO:0036006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"macrophage colony-stimulating factor signaling pathway","synonyms":[{"name":"M-CSF signaling pathway","type":"exact"},{"name":"macrophage colony-stimulating factor signalling pathway","type":"exact"}],"termid":"GO:0038145"}


id: PBO:0032706
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_level_during_cellular_response_to_methyl_methanesulfonate","termid":"PBO:0032706"}


id: GO:1990383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of biotin.","definition_xrefs":["PMID:12557275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to biotin starvation","termid":"GO:1990383"}


id: PBO:0057735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1323","termid":"PBO:0057735"}


id: PBO:0029510
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_stubby_septated_cells_(obsolete_FYPO:0002204)","termid":"PBO:0029510"}


id: GO:0002362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a CD4-positive, CD25-positive, alpha-beta regulatory T cell.","definition_xrefs":["PMID:15207821","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CD4-positive, alpha-beta T cell lineage commitment","termid":"GO:0043373"},{"relation_name":"part_of","term_name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell differentiation","termid":"GO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive, CD25-positive, alpha-beta regulatory T cell lineage commitment","synonyms":[{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T lymphocyte lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-cell lineage commitment","type":"exact"},{"name":"CD4-positive, CD25-positive, alpha-beta regulatory T-lymphocyte lineage commitment","type":"exact"}],"termid":"GO:0002362"}


id: PBO:0029655
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_premeiotic_DNA_replication","termid":"PBO:0029655"}


id: PBO:0083331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps ORF YER137C","termid":"PBO:0083331"}


id: FYPO:0001828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the import of guanine into the cell does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal glucose import","termid":"FYPO:0001827"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abolished glucose import","synonyms":[{"name":"abolished glucose import across plasma membrane","type":"exact"},{"name":"abolished glucose import during mitotic cell cycle","type":"related"},{"name":"abolished glucose import during vegetative growth","type":"exact"},{"name":"abolished glucose import into cell","type":"exact"},{"name":"abolished glucose uptake","type":"exact"},{"name":"glucose import abolished","type":"exact"}],"termid":"FYPO:0001828"}


id: FYPO:0003455
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of the breakdown of arginine into other compounds, including proline, is decreased.","definition_xrefs":["GO:0019493","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased arginine catabolic process to proline","synonyms":[{"name":"decreased arginine catabolic process to proline during mitotic cell cycle","type":"related"},{"name":"decreased arginine catabolic process to proline during vegetative growth","type":"exact"},{"name":"decreased arginine catabolism to proline","type":"exact"},{"name":"reduced arginine catabolic process to proline","type":"exact"}],"termid":"FYPO:0003455"}


id: GO:0035126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process, occurring after embryonic development, by which the anatomical structures of the genitalia are generated and organized.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic genitalia morphogenesis","synonyms":[{"name":"post-embryonic genital morphogenesis","type":"related"}],"termid":"GO:0035126"}


id: SO:0000101
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transposon or insertion sequence. An element that can insert in a variety of DNA sequences.","direct_ancestors":[{"relation_name":"is_a","term_name":"integrated_mobile_genetic_element","termid":"SO:0001039"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element","secondary_identifiers":["http://en.wikipedia.org/wiki/Transposable_element"],"synonyms":[{"name":"transposable element","type":"exact"},{"name":"transposon","type":"exact"}],"termid":"SO:0000101"}


id: GO:0038101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Binding to a nodal protein in the extracellular region, and inhibiting nodal signaling by preventing nodal from binding to its cell surface receptor.","definition_xrefs":["PMID:15062104","GOC:signaling","PMID:14570583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequestering of extracellular ligand from receptor","termid":"GO:0035581"},{"relation_name":"part_of","term_name":"negative regulation of nodal signaling pathway","termid":"GO:1900108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"sequestering of nodal from receptor via nodal binding","synonyms":[{"name":"binding to and sequestering nodal","type":"exact"},{"name":"extracellular regulation of nodal","type":"broad"},{"name":"nodal antagonist activity","type":"broad"}],"termid":"GO:0038101"}


id: MONDO:0018877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fundus albipunctatus","termid":"MONDO:0007639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinitis punctata albescens","secondary_identifiers":["Orphanet:52427","GARD:16655","icd11.foundation:567796529","ICD10CM:H35.5","MEDGEN:278050","SCTID:715562001","UMLS:C1405854"],"termid":"MONDO:0018877","xrefs":{"Monarch":{"xref_id":"0018877"}}}


id: GO:0036072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of bone or of a bony substance, or the conversion of fibrous tissue or of cartilage into bone or a bony substance, that does not require the replacement of preexisting tissues.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"direct ossification","termid":"GO:0036072"}


id: MONDO:0000620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm arising from the breast parenchyma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"breast neoplasm","termid":"MONDO:0021100"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast benign neoplasm","secondary_identifiers":["MEDGEN:91085","ICD9:217","NCIT:C4505","UMLS:C0346156","SCTID:269485000","ICD10CM:D24","DOID:0060082"],"synonyms":[{"name":"benign breast neoplasm","type":"exact"},{"name":"benign breast tumor","type":"exact"},{"name":"benign breast tumour","type":"exact"},{"name":"benign neoplasm of breast","type":"exact"},{"name":"benign neoplasm of the breast","type":"exact"},{"name":"benign tumor of breast","type":"exact"},{"name":"benign tumor of the breast","type":"exact"},{"name":"benign tumour of breast","type":"exact"},{"name":"benign tumour of the breast","type":"exact"},{"name":"breast benign neoplasm","type":"exact"}],"termid":"MONDO:0000620","xrefs":{"Monarch":{"xref_id":"0000620"}}}


id: MONDO:0035742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor V short isoforms-related bleeding disorder","secondary_identifiers":["MEDGEN:1843125","Orphanet:599519","GARD:22413","UMLS:C5680279"],"synonyms":[{"name":"FV short isoforms-related bleeding disorder","type":"exact"}],"termid":"MONDO:0035742","xrefs":{"Monarch":{"xref_id":"0035742"}}}


id: MONDO:0006486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma derived from melanocytes of the uveal tract. It is the most common primary intraocular tumor in the United States and Western Europe. Similar to melanoma of the skin, it is rare in Africa and Asia. Diagnostic procedures include ophthalmoscopic exam, fluorescein angiography and ultrasound. Treatment includes: surgical excision of the eye, iridocyclectomy and tumor resection. Recent treatments also include radiotherapy or photo coagulation. Classification of uveal melanomas recognizes four cell types within these tumors: epithelioid, intermediate, mixed cell, and spindle cell types. The spindle cell type uveal melanomas are further sub-classified as spindle cell type A and spindle cell type B.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal cancer","termid":"MONDO:0002659"},{"relation_name":"is_a","term_name":"ocular melanoma","termid":"MONDO:0006325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"uveal melanoma","secondary_identifiers":["EFO:1000616","MedDRA:10061252","NCIT:C7712","MEDGEN:65077","UMLS:C0220633","DOID:6039","GARD:8621","OMIM:155720","Orphanet:39044","ONCOTREE:UM","MESH:C536494"],"synonyms":[{"name":"choroidal melanoma","type":"related"},{"name":"intraocular melanoma","type":"exact"},{"name":"iris melanoma","type":"narrow"},{"name":"melanoma (disease) of uvea","type":"exact"},{"name":"melanoma of the uvea","type":"exact"},{"name":"melanoma of uvea","type":"exact"},{"name":"melanoma, uveal, malignant","type":"exact"},{"name":"uvea melanoma","type":"exact"},{"name":"uvea melanoma (disease)","type":"exact"},{"name":"uveal melanoma","type":"exact"}],"termid":"MONDO:0006486","xrefs":{"Monarch":{"xref_id":"0006486"}}}


id: GO:2000580
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of ATP-dependent microtubule motor activity, plus-end-directed.","definition_xrefs":["GOC:kmv","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of microtubule motor activity, plus-end-directed (obsolete GO:2000580)","synonyms":[{"name":"regulation of ATP-dependent microtubule motor activity, plus-end-directed","type":"exact"},{"name":"regulation of kinesin ATP phosphohydrolase (plus-end-directed)","type":"exact"},{"name":"regulation of kinesin activity","type":"related"},{"name":"regulation of plus-end-directed kinesin ATPase activity","type":"exact"},{"name":"regulation of plus-end-directed microtubule motor activity","type":"broad"}],"termid":"GO:2000580"}


id: PBO:0057572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 767","termid":"PBO:0057572"}


id: GO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents, or reduces the frequency, rate or extent to which it enters into the host organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by symbiont of entry into host (obsolete GO:0052374)","synonyms":[{"name":"down regulation by symbiont of entry into host","type":"exact"},{"name":"down-regulation by symbiont of entry into host","type":"exact"},{"name":"downregulation by symbiont of entry into host","type":"exact"},{"name":"inhibition by symbiont of entry into host","type":"narrow"}],"termid":"GO:0052374"}


id: PATO:0000078
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the bearer's movement or variation characterized by the regular recurrence or alternation of different quantities or conditions.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temporal distribution quality","termid":"PATO:0002323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhythm quality","termid":"PATO:0000078"}


id: GO:0140616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalyzes the reaction: 2 iodide + L-tyrosine + 2 NADP+ = 3,5-diiodo-L-tyrosine + H+ + 2 NADPH. Note that this activity has only been demonstrated in the direction of 3-deiodination. 3-bromo-L-tyrosine and 3-chloro-L-tyrosine can also be used as substrates.","definition_xrefs":["PMID:18434651","PMID:27643701","RHEA:32479","PMID:25395621","PMID:15289438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond","termid":"GO:0046992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"iodotyrosine deiodinase activity","secondary_identifiers":["EC:1.21.1.1"],"synonyms":[{"name":"iodide peroxidase-tyrosine iodinase activity","type":"related"},{"name":"iodotyrosine deiodase activity","type":"related"},{"name":"monoiodotyrosine deiodinase activity","type":"related"},{"name":"tyrosine iodinase activity","type":"related"}],"termid":"GO:0140616"}


id: PBO:0120282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAML3 antisense RNA 1","termid":"PBO:0120282"}


id: PBO:0026907
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_at_chromosome_arms","termid":"PBO:0026907"}


id: FYPO:0003230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin islands occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at heterochromatin island during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9me at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0003230"}


id: PBO:0075126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF related kinase","termid":"PBO:0075126"}


id: GO:0034687
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alphaL subunit and one beta2 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"integrin alphaL-beta2 complex","synonyms":[{"name":"Itgal-Itgb2 complex","type":"narrow"},{"name":"alphaL-beta2 integrin complex","type":"exact"}],"termid":"GO:0034687"}


id: PBO:0087544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of ribosome-associated quality control trigger complex (RQT); the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0087544"}


id: GO:0070651
data:
  {"annotated_genes":["SJAG_03179","SJAG_04283","SJAG_03728","SJAG_04824","SJAG_04084","SJAG_00854","SJAG_01818","SJAG_04321","SJAG_04153","SJAG_04006","SJAG_01521","SJAG_03745","SJAG_01191","SJAG_04818","SJAG_03507"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76498,94252,95084,97926,99250,99505,104098,106417,107287,108496,109491,109579,117505,117944,120382],"is_not":false,"summary":null,"term":"GO:0070651"}]},"cv_name":"biological_process","definition":"An rRNA catabolic process that results in the targeted detection and degradation of aberrant rRNAs contained within translationally defective ribosomes, thereby acting as a quality-control system.","definition_xrefs":["GOC:rn","PMID:17188037","GOC:mah","PMID:19390089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03507":null,"SJAG_03728":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonfunctional rRNA decay","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NRD","type":"related"}],"termid":"GO:0070651","terms_by_termid":{"GO:0070651":null}}


id: GO:0033446
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes an AGC codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0060090","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"AGC codon-amino acid adaptor activity","synonyms":[{"name":"serine tRNA","type":"related"}],"termid":"GO:0033446"}


id: MONDO:0001846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of uterine corpus leiomyoma characterized by significant cytologic atypia. The atypical cells are large with pleomophic hyperchromatic nuclei.","definition_xrefs":["NCIT:C40167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bizarre leiomyoma","termid":"MONDO:0003288"},{"relation_name":"is_a","term_name":"uterine corpus leiomyoma","termid":"MONDO:0007886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus bizarre leiomyoma","secondary_identifiers":["MEDGEN:275555","UMLS:C1519853","DOID:13958"],"synonyms":[{"name":"bizarre leiomyoma of body of uterus","type":"exact"},{"name":"body of uterus bizarre leiomyoma","type":"exact"},{"name":"uterine corpus Symplastic leiomyoma","type":"exact"},{"name":"uterine corpus bizarre leiomyoma","type":"exact"},{"name":"uterine corpus leiomyoma with bizarre nuclei","type":"exact"},{"name":"uterine corpus leiomyoma, atypical variant","type":"exact"}],"termid":"MONDO:0001846","xrefs":{"Monarch":{"xref_id":"0001846"}}}


id: PBO:0062291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 2 pseudogene","termid":"PBO:0062291"}


id: PBO:0109075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 16 like (pseudogene)","termid":"PBO:0109075"}


id: PATO:0000758
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A balance quality inhering in a bearer by virtue of the bearer's lacking balance.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"balance","termid":"PATO:0000185"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unbalanced","termid":"PATO:0000758"}


id: GO:0002200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process allowing for the production of immune receptors whose specificity is not encoded in the germline genomic sequences.","definition_xrefs":["PMID:16102575","PMID:16166509","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of immune receptors","termid":"GO:0002200"}


id: MONDO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammatory disease of the thyroid gland due to infections by bacteria; fungi; or other microorganisms. Symptoms include tender swelling, fever, and often with leukocytosis.","definition_xrefs":["MESH:D013969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroiditis","termid":"MONDO:0004126"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppurative thyroiditis","secondary_identifiers":["MEDGEN:21550","SCTID:25476006","DOID:14350","NCIT:C129724","UMLS:C0040150","ICD10CM:E06.0","EFO:1001431"],"synonyms":[{"name":"abscess of thyroid","type":"broad"},{"name":"acute suppurative thyroiditis","type":"exact"},{"name":"infectious thyroiditis","type":"exact"},{"name":"suppurative thyroiditis","type":"exact"}],"termid":"MONDO:0001947","xrefs":{"Monarch":{"xref_id":"0001947"}}}


id: GO:1901126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of candicidin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"candicidin metabolic process","termid":"GO:1901125"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"candicidin catabolic process","synonyms":[{"name":"candicidin breakdown","type":"exact"},{"name":"candicidin catabolism","type":"exact"},{"name":"candicidin degradation","type":"exact"}],"termid":"GO:1901126"}


id: PATO:0002394
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A tolerance quality inhering in a bearer by virtue of the bearer's decreased ability to endure a stimulus.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"tolerant to","termid":"PATO:0000515"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased tolerance to","termid":"PATO:0002394"}


id: PBO:0065056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 10","termid":"PBO:0065056"}


id: PBO:0087802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tail-anchored plasma membrane protein with a conserved CYSTM module; possibly involved in response to stress; may contribute to non-homologous end-joining (NHEJ) based on ydl012c htz1 double null phenotype; YDL012C has a paralog, YBR016W, that arose from the whole genome duplication","termid":"PBO:0087802"}


