# terms

id: PBO:0091968
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"III:g.1774235_1774236insGATC","termid":"PBO:0091968"}


id: PBO:0091727
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upregulated During Septation","termid":"PBO:0091727"}


id: MONDO:0012408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia, isolated, with coloboma in which the cause of the disease is a mutation in the VSX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, isolated, with coloboma","termid":"MONDO:0000170"},{"relation_name":"is_a","term_name":"isolated microphthalmia 2","termid":"MONDO:0012409"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, isolated, with coloboma 3","secondary_identifiers":["UMLS:C1864721","GARD:15471","MEDGEN:400598","MESH:C566447","OMIM:610092"],"synonyms":[{"name":"MCOPCB3","type":"related"},{"name":"VSX2 microphthalmia, isolated, with coloboma","type":"exact"},{"name":"microphthalmia with coloboma 3","type":"exact"},{"name":"microphthalmia, cataracts, and iris abnormalities","type":"related"},{"name":"microphthalmia, colobomatous, isolated 3","type":"related"},{"name":"microphthalmia, isolated, with coloboma 3","type":"exact"},{"name":"microphthalmia, isolated, with coloboma caused by mutation in VSX2","type":"exact"},{"name":"microphthalmia, isolated, with coloboma type 3","type":"exact"}],"termid":"MONDO:0012408","xrefs":{"Monarch":{"xref_id":"0012408"}}}


id: GO:0061377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the mammary gland lobule over time, from its formation to the mature structure. A mammary gland lobule is a small rounded projection of the mammary gland.","definition_xrefs":["GOC:yaf","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"mammary gland development","termid":"GO:0030879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland lobule development","termid":"GO:0061377"}


id: PBO:0082039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-deoxyglucose-6-phosphate phosphatase; member of a family of low molecular weight phosphatases, induced by oxidative and osmotic stress, confers 2-deoxyglucose resistance when overexpressed; DOG2 has a paralog, DOG1, that arose from a single-locus duplication; the last half of DOG1 and DOG2 are subject to gene conversions among S. cerevisiae, S. paradoxus, and S. mikatae","termid":"PBO:0082039"}


id: PBO:0078027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 17","termid":"PBO:0078027"}


id: GO:0000124
data:
  {"annotated_genes":["SJAG_01475","SJAG_02773","SJAG_01711","SJAG_03599","SJAG_03668","SJAG_04613","SJAG_02066","SJAG_00087","SJAG_00584","SJAG_03752","SJAG_00184","SJAG_03776","SJAG_04205","SJAG_02458","SJAG_01658","SJAG_04274","SJAG_00641","SJAG_02541","SJAG_02927"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58391,62959,64225,67941,72895,73523,75462,75747,75916,77522,78659,79115,80819,90501,93417,105379,113802,118343,119629],"is_not":false,"summary":null,"term":"GO:0000124"}]},"cv_name":"cellular_component","definition":"A SAGA-type histone acetyltransferase complex that deubiquitinates H2A and/or H2B. This complex is organized into several functional submodules: a structural core including the activator binding module and consisting of ADA1 or a homolog, members of the SPT and TAF protein families as well as promotor recruitment factor TRRAP/TRA1, a histone acetyltransferase (HAT) module consisting of GCN5/KAT2A or PCAF/KAT2B, ADA2, ADA3/NGG1, and SGF29 or homologues thereof, a histone deubiquitinase (DUB) module consisting of ATXN7/SGF73, ATXN7L3/SGF11, ENY2/SUS1 and USP22/UBP8 or homologues thereof, and in some taxa a splicing module consisting of SF3B3 and SF3B5 or homologues thereof (not in fungi). In budding yeast also contains Spt8 which distinguishes it from SAGA-like (SLIK) complex (GO:0046695).","definition_xrefs":["PMID:10637607","PMID:33004486","PMID:19056896","PMID:17337012","PMID:20838651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SAGA-type complex","termid":"GO:0070461"},{"relation_name":"is_a","term_name":"peptidase complex","termid":"GO:1905368"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00087":null,"SJAG_00184":null,"SJAG_00584":null,"SJAG_00641":null,"SJAG_01475":null,"SJAG_01658":null,"SJAG_01711":null,"SJAG_02066":null,"SJAG_02458":null,"SJAG_02541":null,"SJAG_02773":null,"SJAG_02927":null,"SJAG_03599":null,"SJAG_03668":null,"SJAG_03752":null,"SJAG_03776":null,"SJAG_04205":null,"SJAG_04274":null,"SJAG_04613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"SAGA complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0000125","GO:0030914"],"synonyms":[{"name":"PCAF complex","type":"narrow"},{"name":"PCAF histone acetylase-associated complex","type":"narrow"},{"name":"SPT3-TAF9-GCN5 acetylase complex","type":"related"},{"name":"SPT3-TAF9-PCAF acetylase complex","type":"narrow"},{"name":"STAGA coactivator complex","type":"related"},{"name":"STAGA complex","type":"related"},{"name":"Spt-Ada-Gcn5-acetyltransferase complex","type":"exact"}],"termid":"GO:0000124","terms_by_termid":{"GO:0000124":null}}


id: CHEBI:58088
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidyl-1D-myo-inositol 3-phosphate(3-)","termid":"CHEBI:58088"}


id: PBO:0059460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MSC antisense RNA 1","termid":"PBO:0059460"}


id: FYPO:0007371
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a cell population in the vegetative growth phase of the life cycle grows at a faster rate than normal in a medium containing sucrose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth rate","termid":"FYPO:0000636"},{"relation_name":"is_a","term_name":"increased cell population growth on sucrose carbon source","termid":"FYPO:0009076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0001985","FYPO:0002057","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"increased cell population growth rate on sucrose carbon source","synonyms":[{"name":"enhanced growth on sucrose","type":"related"},{"name":"fast cell population growth on sucrose carbon source","type":"exact"},{"name":"increased cell population proliferation on sucrose carbon source","type":"related"},{"name":"increased cell proliferation on sucrose carbon source","type":"related"},{"name":"increased vegetative cell population growth rate on sucrose carbon source","type":"exact"}],"termid":"FYPO:0007371"}


id: PBO:0002924
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human U2AF35","termid":"PBO:0002924"}


id: PBO:0000012
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-localization_target","termid":"PBO:0000012"}


id: GO:0031528
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a microvillus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"part_of","term_name":"microvillus","termid":"GO:0005902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"microvillus membrane","termid":"GO:0031528"}


id: PBO:0089380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldo-keto reductase familiy protein","termid":"PBO:0089380"}


id: GO:0039516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host enzyme activity.","definition_xrefs":["GOC:sp","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host catalytic activity (obsolete GO:0039516)","synonyms":[{"name":"modulation of catalytic activity of host by virus","type":"exact"},{"name":"regulation by virus of host catalytic activity","type":"exact"},{"name":"regulation of host catalytic activity by virus","type":"exact"}],"termid":"GO:0039516"}


id: MONDO:0021979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital hypotrichosis that is characterized by trichorrhexis nodosa and trichoptilosis, dry skin, keratosis pilaris and leukonychia totalis. Other features include progressive transgrediens type of palmoplantar keratoderma, and hyperkeratotic lesions on the knees, elbows and perianal region.","definition_xrefs":["PMID:7577599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nail disorder","termid":"MONDO:0002884"},{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basaran Yilmaz syndrome","secondary_identifiers":["MEDGEN:419444","MESH:C537660","UMLS:C2931577"],"synonyms":[{"name":"keratoderma, hypotrichosis and leukonychia totalis","type":"related"}],"termid":"MONDO:0021979","xrefs":{"Monarch":{"xref_id":"0021979"}}}


id: GO:0046323
data:
  {"annotated_genes":["SJAG_00057","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112697,116234],"is_not":false,"summary":null,"term":"GO:0046323"}]},"cv_name":"biological_process","definition":"The directed movement of the hexose monosaccharide D-glucose into a cell or organelle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-glucose transmembrane transport","termid":"GO:1904659"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_03608":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"D-glucose import","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Glucose_uptake"],"synonyms":[{"name":"glucose import","type":"exact"},{"name":"glucose uptake","type":"exact"}],"termid":"GO:0046323","terms_by_termid":{"GO:0046323":null}}


id: FYPO:0006216
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which establishment of actomyosin contractile ring localization is normal (i.e. indistinguishable from wild type). Establishment of actomyosin contractile ring localization is the part of cytokinesis in which the actomyosin contractile ring is assembled in a specific location.","definition_xrefs":["GO:1903486","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal establishment of actomyosin contractile ring localization","synonyms":[{"name":"normal establishment of actomyosin contractile ring localisation","type":"exact"},{"name":"normal establishment of actomyosin contractile ring localization during mitotic cell cycle","type":"related"},{"name":"normal establishment of actomyosin contractile ring localization during vegetative growth","type":"exact"},{"name":"normal establishment of actomyosin contractile ring positioning","type":"exact"},{"name":"normal establishment of cytokinetic contractile ring localization","type":"exact"},{"name":"normal establishment of mitotic actomyosin contractile ring localization","type":"exact"},{"name":"normal establishment of mitotic contractile ring localization","type":"exact"}],"termid":"FYPO:0006216"}


id: GO:0039654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of a virus membrane with a host endosome membrane. Occurs after internalization of the virus through the endosomal pathway, and results in release of the virus contents into the cell.","definition_xrefs":["UniProtKB-KW:KW-1170","VZ:992","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane fusion involved in viral entry into host cell","termid":"GO:0039663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fusion of virus membrane with host endosome membrane","secondary_identifiers":["GO:0075517","GO:0075501"],"synonyms":[{"name":"fusion of virus membrane with host endosomal membrane","type":"exact"},{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral entry into host cell via caveolin-mediated endocytosis followed by membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral entry into host cell via endocytosis followed by membrane fusion with host endosome","type":"related"},{"name":"viral entry into host cell via endocytosis followed by membrane fusion with the endosome membrane","type":"related"},{"name":"viral penetration via endocytosis followed by caveolae-mediated membrane fusion with the endosome membrane","type":"narrow"},{"name":"viral penetration via endocytosis followed by clathrin-mediated membrane fusion with the endosome membrane","type":"narrow"}],"termid":"GO:0039654"}


id: PBO:0078032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 22","termid":"PBO:0078032"}


id: PBO:0044790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 3","termid":"PBO:0044790"}


id: GO:0106231
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction:H2O + N(6)-propanoyl-L-lysyl-[protein] + NAD+ = 3''-O-propanoyl-ADP-D-ribose + L-lysyl-[protein] + nicotinamide.","definition_xrefs":["GOC:sp","RHEA:23500","PMID:30026585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"NAD-dependent protein-lysine depropionylase activity","termid":"GO:0106231"}


id: MONDO:0008749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudohypoparathyroidism type 2 (PHP2) is a type of pseudohypoparathyroidism (PHP) characterized by resistance to parathyroid hormone (PTH), which manifests with hypocalcemia, hyperphosphatemia and elevated PTH levels, absence of Albright's hereditary osteodystrophy (AHO), and normal expression of the Gs protein with a normal urinary cAMP response.","definition_xrefs":["Orphanet:94090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoparathyroidism","termid":"MONDO:0019992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0005066"],"is_obsolete":false,"name":"pseudohypoparathyroidism type 2","secondary_identifiers":["SCTID:42183005","ICD9:275.49","OMIM:203330","icd11.foundation:1650158822","UMLS:C2932717","NANDO:1201078","MEDGEN:444371","GARD:10682","MESH:C548077"],"synonyms":[{"name":"PHP II","type":"related"},{"name":"PHP2","type":"related"},{"name":"Php 2","type":"related"},{"name":"pseudohypoparathyroidism, type II","type":"related"}],"termid":"MONDO:0008749","xrefs":{"Monarch":{"xref_id":"0008749"}}}


id: PBO:0084675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial asparaginyl-tRNA synthetase","termid":"PBO:0084675"}


id: MONDO:0007005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the rectum and the distal portion of the colon.","definition_xrefs":["MESH:D011350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"ulcerative proctosigmoiditis","secondary_identifiers":["EFO:1001223","ICD9:556.3","MEDGEN:540639","SCTID:52506002","UMLS:C0267390"],"termid":"MONDO:0007005","xrefs":{"Monarch":{"xref_id":"0007005"}}}


id: PBO:0034127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-aligned_with","termid":"PBO:0034127"}


id: MONDO:0000238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A mild form of bubonic plague characterized by symptoms such as mild fever and lymphadenitis.","gene_count":0,"genotype_count":0,"name":"obsolete pestis minor (obsolete MONDO:0000238)","secondary_identifiers":["ICD9:020.8","SCTID:186287003","DOID:0050068"],"synonyms":[{"name":"abortive plague","type":"related"},{"name":"ambulatory plague","type":"exact"},{"name":"larval plague","type":"related"},{"name":"pestis minor","type":"exact"}],"termid":"MONDO:0000238","xrefs":{"Monarch":{"xref_id":"0000238"}}}


id: PBO:0072962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretogranin III","termid":"PBO:0072962"}


id: PBO:0042265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6B","termid":"PBO:0042265"}


id: GO:0000915
data:
  {"annotated_genes":["SJAG_01805","SJAG_04077","SJAG_04621","SJAG_03703","SJAG_00700","SJAG_00082","SJAG_02700","SJAG_00228","SJAG_02831","SJAG_01894","SJAG_04982","SJAG_02392","SJAG_00279","SJAG_04498","SJAG_01143","SJAG_00938","SJAG_03045","SJAG_04597","SJAG_02838","SJAG_01732","SJAG_02592","SJAG_02864","SJAG_02431","SJAG_01787","SJAG_04703","SJAG_00845","SJAG_03596","SJAG_02795","SJAG_01943","SJAG_03048","SJAG_00268","SJAG_04930","SJAG_04887","SJAG_03025"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100296,100038,91336,110171],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[68756,104580,112852,59069,76898,70831,100913,113922,78268,114363,120545,99931,60223,74498,121258,99660,97302,77519,90267,94551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[79366],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[100285],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[104383,96379,112817,97864,92776,105710],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[92008,96421],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[121355,95821],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"}]},"cv_name":"biological_process","definition":"The process of assembly of a ring composed of actin, myosin, and associated proteins that will function in cytokinesis.","definition_xrefs":["GOC:tb","GOC:clt","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assembly of actomyosin apparatus involved in cytokinesis","termid":"GO:0000912"},{"relation_name":"is_a","term_name":"actomyosin contractile ring organization","termid":"GO:0044837"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00228":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00700":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01143":null,"SJAG_01732":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02592":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03045":null,"SJAG_03048":null,"SJAG_03596":null,"SJAG_03703":null,"SJAG_04077":null,"SJAG_04498":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_04930":null,"SJAG_04982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030036"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0030036","GO:0007010","GO:0044085","GO:0007049"],"is_obsolete":false,"name":"actomyosin contractile ring assembly","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:27059155":null,"PMID:32915139":null},"secondary_identifiers":["GO:0045573","GO:2000708"],"synonyms":[{"name":"constriction ring assembly","type":"narrow"},{"name":"contractile ring assembly","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring assembly","type":"exact"},{"name":"cytokinesis, actomyosin contractile ring formation","type":"related"},{"name":"cytokinesis, actomyosin ring biosynthesis","type":"related"},{"name":"cytokinesis, actomyosin ring formation","type":"related"},{"name":"cytokinesis, contractile ring assembly","type":"related"},{"name":"myosin filament organisation involved in cytokinetic actomyosin contractile ring assembly","type":"related"},{"name":"myosin filament organization involved in cytokinetic actomyosin contractile ring assembly","type":"related"},{"name":"myosin filament organization of constriction ring assembly","type":"related"},{"name":"myosin filament organization of contractile ring assembly","type":"related"}],"termid":"GO:0000915","terms_by_termid":{"GO:0071520":null,"GO:0120306":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: MONDO:0018288
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with hepatic involvement (obsolete MONDO:0018288)","secondary_identifiers":["Orphanet:371157"],"synonyms":[{"name":"CDG with hepatic involvement","type":"exact"}],"termid":"MONDO:0018288","xrefs":{"Monarch":{"xref_id":"0018288"}}}


id: PBO:0091613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, zf-fungal binuclear cluster type Klf1","termid":"PBO:0091613"}


id: MONDO:0003209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary thymic carcinoma, characterized by the presence of carcinoma cells with glandular differentiation.","definition_xrefs":["NCIT:C6459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"thymic carcinoma","termid":"MONDO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"thymus gland adenocarcinoma","secondary_identifiers":["DOID:4923","MEDGEN:234426","UMLS:C1336743"],"synonyms":[{"name":"Thymus adenocarcinoma","type":"exact"},{"name":"adenocarcinoma of Thymus","type":"exact"},{"name":"adenocarcinoma of the Thymus","type":"exact"},{"name":"thymic adenocarcinoma","type":"exact"},{"name":"thymus adenocarcinoma","type":"exact"}],"termid":"MONDO:0003209","xrefs":{"Monarch":{"xref_id":"0003209"}}}


id: PBO:0067489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 623, pseudogene","termid":"PBO:0067489"}


id: PBO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.11","termid":"PBO:0000142"}


id: PBO:0058664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6792","termid":"PBO:0058664"}


id: PBO:0058123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4425","termid":"PBO:0058123"}


id: GO:0042873
data:
  {"annotated_genes":["SJAG_04920","SJAG_04905"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94501],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140270"},{"annotations":[91937],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0035432"}]},"cv_name":"biological_process","definition":"The process in which aldonate is transported across a lipid bilayer, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04905":null,"SJAG_04920":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"aldonate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aldonate transport","type":"related"}],"termid":"GO:0042873","terms_by_termid":{"GO:0035432":null,"GO:0140270":null}}


id: GO:0032377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular lipid transport","termid":"GO:0032377"}


id: MONDO:0859162
data:
  {"annotated_genes":["SJAG_02550"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88541],"is_not":false,"summary":null,"term":"MONDO:0859162"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02550":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with infantile epileptic spasms","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1781627","OMIM:619373","UMLS:C5543538"],"termid":"MONDO:0859162","terms_by_termid":{"MONDO:0859162":null},"xrefs":{"Monarch":{"xref_id":"0859162"}}}


id: GO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism in response to a temperature gradient. Movement may be towards either a higher or lower temperature.","definition_xrefs":["WB_REF:cgc467","GOC:cab1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to temperature stimulus","termid":"GO:0009266"},{"relation_name":"is_a","term_name":"taxis","termid":"GO:0042330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermotaxis","secondary_identifiers":["Wikipedia:Thermotaxis"],"synonyms":[{"name":"taxis in response to temperature stimulus","type":"exact"}],"termid":"GO:0043052"}


id: MONDO:0100416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly FLT3 tyrosine kinase domain point mutation. (Single nucleotide mutations in the tyrosine kinase domain encoded by the human FLT3 gene that are associated with acute myeloid leukemia and poor prognosis.)","definition_xrefs":["NCIT:C67495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, FLT3 tyrosine kinase domain point mutation","synonyms":[{"name":"AML, FLT3 tyrosine kinase domain point mutation","type":"exact"},{"name":"AML, FLT3-TKD Point Mutation","type":"exact"},{"name":"AML, FLT3/TKD Point Mutation","type":"exact"}],"termid":"MONDO:0100416","xrefs":{"Monarch":{"xref_id":"0100416"}}}


id: PBO:0076825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENT5C divergent transcript","termid":"PBO:0076825"}


id: PBO:0043191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoskeleton associated protein 2","termid":"PBO:0043191"}


id: GO:0009319
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses cytochrome o ubiquinol oxidase activity; consists of four polypeptide subunits and associated prosthetic groups.","definition_xrefs":["MetaCyc:CYT-O-UBIOX-CPLX","PMID:3052268","GOC:mah","PMID:11017202"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytochrome complex","termid":"GO:0070069"},{"relation_name":"is_a","term_name":"respiratory chain complex","termid":"GO:0098803"},{"relation_name":"is_a","term_name":"transmembrane transporter complex","termid":"GO:1902495"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cytochrome o ubiquinol oxidase complex","termid":"GO:0009319"}


id: PBO:0073640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 27, pseudogene","termid":"PBO:0073640"}


id: PBO:0048728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycolipid transfer protein domain containing 2","termid":"PBO:0048728"}


id: PBO:0043212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC28 protein kinase regulatory subunit 1B pseudogene 5","termid":"PBO:0043212"}


id: FYECO:0000170
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which hydroxyurea was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ HU","synonyms":[{"name":"hydroxyurea added","type":"exact"}],"termid":"FYECO:0000170"}


id: PBO:0081465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 335","termid":"PBO:0081465"}


id: PBO:0005247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H4-like TAF Taf6, SAGA complex subunit","termid":"PBO:0005247"}


id: PBO:0043862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carnitine O-acetyltransferase","termid":"PBO:0043862"}


id: MONDO:0018794
data:
  {"annotated_genes":["SJAG_03204","SJAG_02093","SJAG_02091"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88097,88098,88099],"is_not":false,"summary":null,"term":"MONDO:0018794"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02091":null,"SJAG_02093":null,"SJAG_03204":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004335"],"is_obsolete":false,"name":"cytosolic phospholipase-A2 alpha deficiency associated bleeding disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1799074","GARD:17857","OMIM:618372","Orphanet:477787","UMLS:C5567651"],"synonyms":[{"name":"GASTROINTESTINAL ULCERATION, RECURRENT, WITH DYSFUNCTIONAL PLATELETS","type":"related"},{"name":"GURDP","type":"related"},{"name":"PLA2G4A-related platelet dysfunction","type":"exact"},{"name":"Phospholipase A2, Group Iva, Deficiency of","type":"related"},{"name":"cytosolic phospholipase-A2 alpha deficiency associated bleeding disorder","type":"exact"},{"name":"platelet dysfunction due to cytosolic phospholipase-A2 alpha deficiency","type":"exact"}],"termid":"MONDO:0018794","terms_by_termid":{"MONDO:0018794":null},"xrefs":{"Monarch":{"xref_id":"0018794"}}}


id: FYPO:0006686
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which DNA double-strand break resection is decreased. DNA double-strand break resection is the process by which long-tract single-stranded 3'-end DNA is generated by removal of bases from a 5' end from which SPO11/Rec12-oligonucleotide complexes have been removed.","definition_xrefs":["GO:0000729","PMID:21931565","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA recombination","termid":"FYPO:0000063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"decreased DNA double-strand break processing","synonyms":[{"name":"decreased DNA double-strand break resection","type":"exact"},{"name":"decreased DNA double-strand break resectioning","type":"exact"},{"name":"decreased DSB processing","type":"exact"},{"name":"reduced DNA double-strand break processing","type":"exact"}],"termid":"FYPO:0006686"}


id: PBO:0079458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"terminal uridylyl transferase 7","termid":"PBO:0079458"}


id: FYPO:0008032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic cell cycle spindle assembly checkpoint activation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:36108046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic spindle assembly checkpoint","termid":"FYPO:0003762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000298","FYPO:0000631","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal mitotic spindle checkpoint activation","termid":"FYPO:0008032"}


id: GO:0045060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of elimination of immature T cells in the thymus which react strongly with self-antigens.","definition_xrefs":["PMID:12414722","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative T cell selection","termid":"GO:0043383"},{"relation_name":"is_a","term_name":"thymic T cell selection","termid":"GO:0045061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative thymic T cell selection","synonyms":[{"name":"negative thymic T lymphocyte selection","type":"exact"},{"name":"negative thymic T-cell selection","type":"exact"},{"name":"negative thymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045060"}


id: GO:0014808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the release of sequestered calcium ion by sarcoplasmic reticulum into cytosol occurs via calcium release channels.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoplasmic reticulum calcium ion transport","termid":"GO:0070296"},{"relation_name":"is_a","term_name":"release of sequestered calcium ion into cytosol by endoplasmic reticulum","termid":"GO:1903514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"release of sequestered calcium ion into cytosol by sarcoplasmic reticulum","synonyms":[{"name":"release of sequestered calcium ion by sarcoplasmic reticulum into cytosol","type":"related"}],"termid":"GO:0014808"}


id: PBO:0027754
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus_during_cellular_response_to_calcium_ion","termid":"PBO:0027754"}


id: FYECO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing galactose and glucose as the carbon sources, yeast extract and other components. The concentration of galactose is typically around 2%, whereas the concentration of glucose is very low - around 0.1%.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactose rich medium with trace glucose","synonyms":[{"name":"YpGalA","type":"narrow"},{"name":"non-fermentable galactose and very low glucose rich medium","type":"exact"},{"name":"nonfermentable galactose and very low glucose rich medium","type":"exact"}],"termid":"FYECO:0000148"}


id: MONDO:0012488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatitis B virus, susceptibility to","secondary_identifiers":["UMLS:C1864880","MEDGEN:400632","OMIM:610424"],"synonyms":[{"name":"HBV, resistance to","type":"related"},{"name":"HBV, susceptibility to","type":"related"},{"name":"Hepatitis B Virus, resistance to","type":"related"},{"name":"hepatitis B virus infection, susceptibility to","type":"exact"},{"name":"hepatitis b virus, susceptibility to","type":"exact"}],"termid":"MONDO:0012488","xrefs":{"Monarch":{"xref_id":"0012488"}}}


id: PBO:0058098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4314","termid":"PBO:0058098"}


id: PBO:0001923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain protein Ucp14","termid":"PBO:0001923"}


id: SO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A modified adenine DNA base feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_DNA_base","termid":"SO:0000305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_adenine","termid":"SO:0001962"}


id: PBO:0060680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDP antisense RNA 1","termid":"PBO:0060680"}


id: MONDO:0044333
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome which occurs in individuals with a history of alcohol abuse. It is caused by prolonged alcohol-induced neurological damage and malnutrition including vitamin and electrolyte deficiencies. Clinical signs include altered mental status, visual impairment and decreased muscle coordination. The clinical course varies and is, in part, dependent upon the severity of symptoms at presentation. The prognosis is poor and worsens if alcohol abuse continues.","definition_xrefs":["NCIT:C34366"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Wernicke-Korsakoff syndrome","termid":"MONDO:0010198"},{"relation_name":"is_a","term_name":"alcohol amnestic disorder","termid":"MONDO:0021702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"alcohol-induced Wernicke-Korsakoff's syndrome","secondary_identifiers":["MEDGEN:312391","UMLS:C1704427"],"synonyms":[{"name":"alcohol-induced Wernicke-Korsakoff's syndrome","type":"exact"},{"name":"alcohol-induced amnestic syndrome","type":"exact"},{"name":"alcoholic Korsakoff's psychosis","type":"exact"}],"termid":"MONDO:0044333","xrefs":{"Monarch":{"xref_id":"0044333"}}}


id: PBO:0017713
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GF14","termid":"PBO:0017713"}


id: PBO:0081752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 681","termid":"PBO:0081752"}


id: GO:0060001
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A motor activity that generates movement along a microfilament towards the minus end, driven by ATP hydrolysis. The minus end of an actin filament is the end that does not preferentially add actin monomers.","definition_xrefs":["PMID:10519557","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microfilament motor activity","termid":"GO:0000146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003774"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003774","GO:0003824"],"is_obsolete":false,"name":"minus-end directed microfilament motor activity","synonyms":[{"name":"minus-end directed actin filament motor activity","type":"related"},{"name":"minus-end directed actin-filament motor activity","type":"exact"},{"name":"pointed-end directed actin-filament motor activity","type":"exact"}],"termid":"GO:0060001"}


id: PBO:0087990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-specific 2-thiouridylase; responsible for 2-thiolation of the wobble base of mitochondrial tRNAs; human homolog TRMU is implicated in myoclonus epilepsy associated with ragged red fibers (MERRF), and can complement yeast null mutant","termid":"PBO:0087990"}


id: FYPO:0002813
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular glycerol level during cellular response to osmotic stress","termid":"FYPO:0005457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular glycerol level during cellular response to salt stress","synonyms":[{"name":"decreased cellular glycerol level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular glycerol level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"decreased glycerol accumulation during cellular response to salt stress","type":"related"},{"name":"reduced cellular glycerol level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0002813"}


id: PR:O13942
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23H3.12c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23H3.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23H3.12c","synonyms":[{"name":"Spom972h-SPAC23H3.12c","type":"exact"}],"termid":"PR:O13942"}


id: FYPO:0003815
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to the S phase DNA damage checkpoint (also known as the intra-S phase DNA damage checkpoint) is decreased. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage. In a mutant, the checkpoint may fail to arrest or delay cell cycle progression under appropriate conditions, or the incidence or duration of arrest or delay may differ from wild type under any specified set of conditions.","definition_xrefs":["PomBase:mah","GO:0072429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal S-phase DNA damage checkpoint","termid":"FYPO:0000007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0000298","FYPO:0000631"],"is_obsolete":false,"name":"decreased response to S-phase DNA damage checkpoint signaling","synonyms":[{"name":"decreased S-phase DNA damage checkpoint during mitotic cell cycle","type":"related"},{"name":"decreased S-phase DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"decreased response to intra-S DNA damage checkpoint signaling","type":"exact"},{"name":"decreased response to mitotic S-phase DNA damage checkpoint signaling","type":"exact"},{"name":"reduced response to intra-S DNA damage checkpoint signaling","type":"exact"}],"termid":"FYPO:0003815"}


id: PBO:0052198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium calcium-activated channel subfamily N member 2","termid":"PBO:0052198"}


id: PBO:0085527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27A has a paralog, RPS27B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0085527"}


id: PBO:0043118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic iron-sulfur assembly component 2B","termid":"PBO:0043118"}


id: FYPO:0006575
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which abnormal negative regulation of the initiation of mitotic DNA replication results in one or more rounds of rereplication of the entire genome, but takes place during S phases that appear nearly normal apart from occurring without intervening mitoses. Origin usage is normal, rounds of DNA synthesis are correlated with G1/S phase gene expression and cell mass increase, and the genome is replicated evenly.","definition_xrefs":["PMID:19487461","PMID:20736315","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication","termid":"FYPO:0001425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication, with otherwise normal S phase","synonyms":[{"name":"abnormal negative regulation of DNA replication initiation resulting in complete rereplication, with otherwise normal S phase, during mitotic cell cycle","type":"related"},{"name":"abnormal negative regulation of mitotic DNA replication initiation resulting in complete rereplication, with otherwise normal S phase, during vegetative growth","type":"exact"},{"name":"cell cycling without mitosis","type":"related"}],"termid":"FYPO:0006575"}


id: MONDO:0016618
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatoid factor-negative juvenile idiopathic arthritis","termid":"MONDO:0019432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rheumatoid factor-negative juvenile idiopathic arthritis without anti-nuclear antibodies","secondary_identifiers":["Orphanet:247861"],"synonyms":[{"name":"juvenile rheumatoid factor-negative polyarthritis without anti-nuclear antibodies","type":"exact"},{"name":"polyarthritis without rheumatoid factor without anti-nuclear antibodies","type":"exact"},{"name":"rheumatoid factor-negative JIA without anti-nuclear antibodies","type":"exact"}],"termid":"MONDO:0016618","xrefs":{"Monarch":{"xref_id":"0016618"}}}


id: PR:O74770
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC24C6.09c gene.","definition_xrefs":["UniProtKB:O74770","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoketolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC24C6.09c","synonyms":[{"name":"Spom972h-SPBC24C6.09c","type":"exact"}],"termid":"PR:O74770"}


id: GO:0004104
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an acylcholine + H2O = choline + a carboxylic acid anion.","definition_xrefs":["EC:3.1.1.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0003824","GO:0016788"],"is_obsolete":false,"name":"cholinesterase activity","secondary_identifiers":["RHEA:21964","MetaCyc:CHOLINESTERASE-RXN"],"synonyms":[{"name":"BtChoEase activity","type":"related"},{"name":"acylcholine acylhydrolase activity","type":"related"},{"name":"anticholineesterase activity","type":"related"},{"name":"benzoylcholinesterase activity","type":"related"},{"name":"butyrylcholine esterase activity","type":"related"},{"name":"butyrylcholinesterase activity","type":"related"},{"name":"choline esterase II (unspecific) activity","type":"related"},{"name":"choline esterase activity","type":"related"},{"name":"non-specific cholinesterase activity","type":"related"},{"name":"propionylcholinesterase activity","type":"related"},{"name":"pseudocholinesterase activity","type":"related"}],"termid":"GO:0004104"}


id: GO:0160071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulation of double fertilization forming a zygote and endosperm process that ensures that only a single sperm cell fertilizes one egg cell and another single sperm cell fertilizes one central cell.","definition_xrefs":["PMID:27951463"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of double fertilization forming a zygote and endosperm","termid":"GO:0080155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prevention of polyspermy during double fertilization","termid":"GO:0160071"}


id: PBO:0079541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like modifier activating enzyme 2","termid":"PBO:0079541"}


id: GO:1990388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of iron ions into the phloem from the xylem.","definition_xrefs":["PMID:24867923","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron ion transport","termid":"GO:0006826"},{"relation_name":"is_a","term_name":"phloem transport","termid":"GO:0010233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"xylem-to-phloem iron transport","termid":"GO:1990388"}


id: MONDO:0045034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disease characteristic","termid":"MONDO:0021125"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious disease characteristic","termid":"MONDO:0045034","xrefs":{"Monarch":{"xref_id":"0045034"}}}


id: PBO:0029017
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_chromatin_silencing_at_centromere","termid":"PBO:0029017"}


id: PBO:0068405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 224","termid":"PBO:0068405"}


id: GO:1990042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which glycerol is converted into glycerone and NAD+ or NADP is reduced.","definition_xrefs":["PMID:22979944"],"gene_count":0,"genotype_count":0,"name":"obsolete glycerol dehydrogenase [NAD(P)+] activity (obsolete GO:1990042)","synonyms":[{"name":"glycerol dehydrogenase activity, NAD or NADP as acceptor","type":"exact"}],"termid":"GO:1990042"}


id: PBO:0043453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNN3 divergent transcript","termid":"PBO:0043453"}


id: MONDO:0001608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm involving a vagus nerve.","definition_xrefs":["MONDO:patterns/neoplasm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vagus nerve disorder","termid":"MONDO:0001535"},{"relation_name":"is_a","term_name":"glossopharyngeal nerve neoplasm","termid":"MONDO:0002638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vagus nerve neoplasm","secondary_identifiers":["DOID:12984","ICD9:239.7","MEDGEN:224735","NCIT:C5831","SCTID:126976007","UMLS:C1263901"],"synonyms":[{"name":"Vagus nerve neoplasm","type":"exact"},{"name":"Vagus nerve neoplasms","type":"exact"},{"name":"Vagus nerve tumor","type":"exact"},{"name":"Vagus nerve tumors","type":"exact"},{"name":"Vagus nerve tumour","type":"exact"},{"name":"Vagus nerve tumours","type":"exact"},{"name":"Xth cranial nerve neoplasms","type":"exact"},{"name":"Xth cranial nerve tumors","type":"exact"},{"name":"Xth cranial nerve tumours","type":"exact"},{"name":"neoplasm of Vagus nerve","type":"exact"},{"name":"neoplasm of tenth cranial nerve","type":"exact"},{"name":"neoplasm of the Vagus nerve","type":"exact"},{"name":"neoplasm of the tenth cranial nerve","type":"exact"},{"name":"neoplasm of vagus nerve","type":"exact"},{"name":"tenth cranial nerve neoplasm","type":"exact"},{"name":"tenth cranial nerve neoplasms","type":"exact"},{"name":"tenth cranial nerve tumor","type":"exact"},{"name":"tenth cranial nerve tumors","type":"exact"},{"name":"tenth cranial nerve tumour","type":"exact"},{"name":"tenth cranial nerve tumours","type":"exact"},{"name":"tumor of Vagus nerve","type":"exact"},{"name":"tumor of tenth cranial nerve","type":"exact"},{"name":"tumor of the Vagus nerve","type":"exact"},{"name":"tumor of the tenth cranial nerve","type":"exact"},{"name":"tumor of vagus nerve","type":"exact"},{"name":"tumour of Vagus nerve","type":"exact"},{"name":"tumour of tenth cranial nerve","type":"exact"},{"name":"tumour of the Vagus nerve","type":"exact"},{"name":"tumour of the tenth cranial nerve","type":"exact"},{"name":"tumour of vagus nerve","type":"exact"},{"name":"vagus nerve neoplasm (disease)","type":"exact"},{"name":"vagus nerve tumor","type":"exact"},{"name":"vagus nerve tumour","type":"exact"}],"termid":"MONDO:0001608","xrefs":{"Monarch":{"xref_id":"0001608"}}}


id: PBO:0115012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial rRNA ribose methyltransferase Mrm1","termid":"PBO:0115012"}


id: PBO:0067563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 716, pseudogene","termid":"PBO:0067563"}


id: MONDO:0000933
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the subglottic area of the larynx.","definition_xrefs":["NCIT:C4426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal neoplasm","termid":"MONDO:0021071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subglottis neoplasm","secondary_identifiers":["MEDGEN:87513","SCTID:126696001","UMLS:C0345746","DOID:10069"],"synonyms":[{"name":"neoplasm of subglottis","type":"exact"},{"name":"neoplasm of the subglottis","type":"exact"},{"name":"subglottic neoplasm","type":"exact"},{"name":"subglottic tumor","type":"exact"},{"name":"subglottic tumour","type":"exact"},{"name":"subglottis neoplasm","type":"exact"},{"name":"subglottis neoplasm (disease)","type":"exact"},{"name":"subglottis tumor","type":"exact"},{"name":"subglottis tumour","type":"exact"},{"name":"tumor of subglottis","type":"exact"},{"name":"tumor of the subglottis","type":"exact"},{"name":"tumour of subglottis","type":"exact"},{"name":"tumour of the subglottis","type":"exact"}],"termid":"MONDO:0000933","xrefs":{"Monarch":{"xref_id":"0000933"}}}


id: MOD:01137
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction of a lysine residue with 2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride, Pmc chloride, to form N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine.","definition_xrefs":["DeltaMass:310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"},{"relation_name":"is_a","term_name":"2,2,5,7,8-pentamethylchroman-6-sulfonyl chloride derivatized residue","termid":"MOD:01120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-(2,2,5,7,8-pentamethylchroman-6-sulfonyl)-L-lysine","synonyms":[{"name":"PMC lysyl","type":"exact"},{"name":"PmcLys","type":"exact"}],"termid":"MOD:01137"}


id: GO:0015411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of taurine from one side of a membrane to the other according to the reaction: ATP + H2O + taurine(out) = ADP + phosphate + taurine(in).","definition_xrefs":["RHEA:14613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"taurine transmembrane transporter activity","termid":"GO:0005368"},{"relation_name":"is_a","term_name":"ABC-type alkanesulfonate transporter transporter activity","termid":"GO:0042959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type taurine transporter transporter activity","secondary_identifiers":["EC:7.6.2.7","MetaCyc:ABC-64-RXN"],"synonyms":[{"name":"ATP-dependent taurine transporter activity","type":"related"},{"name":"ATPase-coupled taurine transporter activity","type":"related"},{"name":"taurine ABC transporter","type":"exact"},{"name":"taurine-transporting ATPase activity","type":"related"}],"termid":"GO:0015411"}


id: PBO:0054098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1451","termid":"PBO:0054098"}


id: PATO:0000104
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000104 osmotic response sensitivity (obsolete PATO:0000104)","termid":"PATO:0000104"}


id: MONDO:0016078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, potentially life-threatening, vascular disease characterized by a direct communication between an artery and a vein, without the interposition of the capillary bed, ocurring in the systemic circulation (mainly the cranium, liver, lungs, extremities, and vessels in or near the thoracic wall). Manifestations are variable depending on size and extent of the fistula, the involved blood vessels and the precise location of the collaterals and may include systolic or continuous murmur over the affected organ, tachycardia, increased stroke volume, cardiomegaly and increased pulmonary vascular markings.","definition_xrefs":["PMID:35685292","Orphanet:2039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital arteriovenous fistula","termid":"MONDO:0020296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital systemic arteriovenous fistula","secondary_identifiers":["MEDGEN:1679454","UMLS:C5191839","GARD:18758"],"termid":"MONDO:0016078","xrefs":{"Monarch":{"xref_id":"0016078"}}}


id: GO:0099543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse mediated by a soluble gas ligand crossing the synaptic cleft.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling","termid":"GO:0099537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by soluble gas","termid":"GO:0099543"}


id: MONDO:0019703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary bone dysplasia with increased bone density (obsolete MONDO:0019703)","synonyms":[{"name":"primary osteodysplasia with increased bone density","type":"related"},{"name":"primary skeletal dysplasia with increased bone density","type":"related"},{"name":"sclerosing bone dysplasia","type":"related"}],"termid":"MONDO:0019703","xrefs":{"Monarch":{"xref_id":"0019703"}}}


id: PR:Q10585
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spd1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-phase delaying protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.03","synonyms":[{"name":"Spom972h-spd1","type":"exact"},{"name":"protein p14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10585"}


id: PBO:0056251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mal, T cell differentiation protein 2","termid":"PBO:0056251"}


id: GO:2000693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of seed maturation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"seed maturation","termid":"GO:0010431"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of seed maturation","termid":"GO:2000693"}


id: MONDO:0800198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alopecia universalis","secondary_identifiers":["icd11.foundation:69070500","ICD10CM:L63.1","UMLS:C0263505","MEDGEN:120481"],"synonyms":[{"name":"AU","type":"exact"}],"termid":"MONDO:0800198","xrefs":{"Monarch":{"xref_id":"0800198"}}}


id: PBO:0057464
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 583","termid":"PBO:0057464"}


id: PBO:0034622
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_transcription_from_CRE_promoter_during_cellular_response_to_miconazole","termid":"PBO:0034622"}


id: MONDO:0004467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign teratoma that arises from the stomach.","definition_xrefs":["NCIT:C5260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric teratoma","termid":"MONDO:0003513"},{"relation_name":"is_a","term_name":"mature teratoma","termid":"MONDO:0003517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"mature gastric teratoma","secondary_identifiers":["MEDGEN:233165","DOID:8118","UMLS:C1334635"],"synonyms":[{"name":"mature gastric teratoma","type":"exact"},{"name":"mature teratoma of stomach","type":"exact"},{"name":"mature teratoma of the stomach","type":"exact"},{"name":"stomach mature teratoma","type":"exact"}],"termid":"MONDO:0004467","xrefs":{"Monarch":{"xref_id":"0004467"}}}


id: PBO:0043364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin light chain B","termid":"PBO:0043364"}


id: PBO:0077793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topoisomerase I binding, arginine and serine rich like, pseudogene","termid":"PBO:0077793"}


id: GO:0003305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell of the myocardium from one site to another that will contribute to heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration involved in heart development","termid":"GO:0060973"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in heart jogging","termid":"GO:0003305"}


id: PBO:0120359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTW motif tRNA-uridine aminocarboxypropyltransferase 1","termid":"PBO:0120359"}


id: PBO:0062243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BJ member 1 pseudogene","termid":"PBO:0062243"}


id: PBO:0070338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY4 pseudogene 10","termid":"PBO:0070338"}


id: FYPO:0006127
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein oligomerization is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein oligomerization","termid":"FYPO:0005220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased protein oligomerization","synonyms":[{"name":"increased protein oligomerization during mitotic cell cycle","type":"related"},{"name":"increased protein oligomerization during vegetative growth","type":"exact"}],"termid":"FYPO:0006127"}


id: FYPO:0002940
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing micafungin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal growth on echinocandin","termid":"FYPO:0004892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on micafungin","synonyms":[{"name":"normal cell population growth in presence of micafungin","type":"exact"},{"name":"normal cell population growth on micafungin","type":"exact"},{"name":"normal cellular response to micafungin","type":"related"},{"name":"normal vegetative cell population growth on micafungin","type":"exact"}],"termid":"FYPO:0002940"}


id: PBO:0012295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit Spt16","termid":"PBO:0012295"}


id: PBO:0049221
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor kinase 4","termid":"PBO:0049221"}


id: MONDO:0026170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic central nervous system malformation (obsolete MONDO:0026170)","secondary_identifiers":["Orphanet:183506"],"termid":"MONDO:0026170","xrefs":{"Monarch":{"xref_id":"0026170"}}}


id: GO:0003190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the atrioventricular valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"atrioventricular valve morphogenesis","termid":"GO:0003181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular valve formation","synonyms":[{"name":"AV valve formation","type":"exact"}],"termid":"GO:0003190"}


id: RO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between two entities, where the relationship holds based on the presence or absence of statistical dependence relationship. The entities may be statistical variables, or they may be other kinds of entities such as diseases, chemical entities or processes.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"related_via_dependence_to","termid":"RO:0002609"}


id: PATO:0000337
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color quality inhering in a bearer by virtue of the bearer's lacking color.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color pattern","termid":"PATO:0000019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorless","secondary_identifiers":["PATO:0000334"],"synonyms":[{"name":"unpigmented","type":"related"}],"termid":"PATO:0000337"}


id: MOD:01313
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a lysine N6-hydrogen with a quaternary amine reagent heavy (+9amu) form group.","definition_xrefs":["PubMed:11857757","Unimod:63#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+9amu) N6-L-lysine","synonyms":[{"name":"GIST-Quat:2H(9)","type":"related"},{"name":"Quaternary amine labeling reagent heavy form (+9amu), N-term & K","type":"related"}],"termid":"MOD:01313"}


id: GO:0035189
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multiprotein complex containing a heterodimeric E2F transcription factor and a Retinoblastoma (Rb) family member. This complex is capable of repressing transcription of E2F-regulated genes in order to regulate cell cycle progression.","definition_xrefs":["PMID:14616073"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575"],"is_obsolete":false,"name":"Rb-E2F complex","synonyms":[{"name":"retinoblastoma-E2F complex","type":"exact"}],"termid":"GO:0035189"}


id: GO:0072079
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a nephron tubule from unspecified parts. A nephron tubule is an epithelial tube that is part of the nephron, the functional part of the kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic epithelial tube formation","termid":"GO:0001838"},{"relation_name":"part_of","term_name":"nephron tubule morphogenesis","termid":"GO:0072078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephron tubule formation","termid":"GO:0072079"}


id: PBO:0057913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3616","termid":"PBO:0057913"}


id: GO:0030308
data:
  {"annotated_genes":["SJAG_02169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, extent or direction of cell growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell growth","termid":"GO:0001558"},{"relation_name":"is_a","term_name":"negative regulation of growth","termid":"GO:0045926"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cell growth","termid":"GO:0016049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02169":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell growth","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of cell growth","type":"exact"},{"name":"down-regulation of cell growth","type":"exact"},{"name":"downregulation of cell growth","type":"exact"},{"name":"inhibition of cell growth","type":"narrow"}],"termid":"GO:0030308","terms_by_termid":{"GO:0051517":null}}


id: PBO:0038304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase chadoprop types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"db_date_version","termid":"PBO:0038304"}


id: PBO:0084923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Monoglyceride lipase (MGL) that hydrolyzes fatty acid ethyl esters; required for removal of toxic metabolites in ethanol producing yeast cells; localizes to lipid particles and membranes; member of the eukaryotic serine hydrolase family; functional ortholog of mammalian MGL","termid":"PBO:0084923"}


id: MONDO:0009742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Elejalde syndrome (ES) is characterized by silvery to leaden hair, bronze skin color in sun-exposed areas and severe neurological impairment.","definition_xrefs":["Orphanet:33445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"hyperpigmentation of the skin","termid":"MONDO:0019289"},{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroectodermal melanolysosomal disease","secondary_identifiers":["UMLS:C1860157","GARD:16630","icd11.foundation:771734461","SCTID:724091002","MESH:C536203","MEDGEN:348553","OMIM:256710"],"synonyms":[{"name":"ELEJALDE disease","type":"related"},{"name":"Elejalde disease","type":"exact"},{"name":"neuroectodermal melanolysosomal disease","type":"exact"}],"termid":"MONDO:0009742","xrefs":{"Monarch":{"xref_id":"0009742"}}}


id: PBO:0055431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2861","termid":"PBO:0055431"}


id: PBO:0084181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Histone chaperone and assembly chaperone for Rps6a/b; involved in histone exchange, replacing histone H2A-H2B dimers or histone variant dimers from assembled nucleosomes; promotes solubility of Rps6a, and 40S ribosomal subunit biogenesis; role in transport of H2A and H2B histones to the nucleus; regulates microtubule dynamics during mitosis; interacts with mitotic cyclin Clb2p; controls bud morphogenesis; phosphorylated by CK2; protein abundance increases in response to DNA replication stress","termid":"PBO:0084181"}


id: PBO:0044218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic thiouridylase subunit 1","termid":"PBO:0044218"}


id: PBO:0085633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in GPI anchor synthesis; multimembrane-spanning protein that localizes to the endoplasmic reticulum; highly conserved among eukaryotes; GPI stands for glycosylphosphatidylinositol","termid":"PBO:0085633"}


id: PBO:0071913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 52","termid":"PBO:0071913"}


id: MONDO:0015123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare lipid metabolism disorder.","gene_count":0,"genotype_count":0,"name":"obsolete rare inherited dyslipidemia (obsolete MONDO:0015123)","secondary_identifiers":["ICD10CM:E78.5","Orphanet:101953"],"synonyms":[{"name":"rare dyslipidemia","type":"related"},{"name":"rare lipid metabolism disorder","type":"exact"}],"termid":"MONDO:0015123","xrefs":{"Monarch":{"xref_id":"0015123"}}}


id: GO:0097205
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A renal system process in which fluid circulating through the body is filtered through a barrier system.","definition_xrefs":["GOC:pr","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal system process","termid":"GO:0003014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal filtration","termid":"GO:0097205"}


id: PBO:0082799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of transport protein particle (TRAPP) complex II; TRAPPII is a multimeric guanine nucleotide-exchange factor for the GTPase Ypt1p, regulating intra-Golgi and endosome-Golgi traffic; promotes association of TRAPPII-specific subunits with the TRAPP core complex; sedlin related; human Sedlin mutations cause SEDT, a skeletal disorder","termid":"PBO:0082799"}


id: PBO:0083800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein required for the accumulation of box C/D snoRNA","termid":"PBO:0083800"}


id: GO:0036225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of vitamin B1 (also called thiamin and thiamine).","definition_xrefs":["GOC:al","Wikipedia:Thiamine"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to vitamin B1 starvation","synonyms":[{"name":"cellular response to thiamin starvation","type":"exact"},{"name":"cellular response to vitamin B1 deprivation","type":"exact"}],"termid":"GO:0036225"}


id: PBO:0120428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dickkopf Wnt signaling pathway inhibitor 1","termid":"PBO:0120428"}


id: PBO:0038557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abhydrolase domain containing 18","termid":"PBO:0038557"}


id: PBO:0005687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral inner nuclear membrane protein Ima1","termid":"PBO:0005687"}


id: PBO:0077296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 38B","termid":"PBO:0077296"}


id: PBO:0078590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 3, Y-linked","termid":"PBO:0078590"}


id: GO:0140691
data:
  {"annotated_genes":["SJAG_03070","SJAG_00195","SJAG_03460","SJAG_04266","SJAG_02469","SJAG_01819","SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100496,109302,110580,114946,115885,117000,117934],"is_not":false,"summary":null,"term":"GO:0140691"}]},"cv_name":"molecular_function","definition":"Binding to an RNA or an RNA-containing complex to assist the folding process.","definition_xrefs":["PMID:31165735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00195":null,"SJAG_00886":null,"SJAG_01819":null,"SJAG_02469":null,"SJAG_03070":null,"SJAG_03460":null,"SJAG_04266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"RNA folding chaperone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140691","terms_by_termid":{"GO:0140691":null}}


id: PBO:0090375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergothioneine biosynthesis methyltransferase Egt2","termid":"PBO:0090375"}


id: MONDO:0018718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vascular tumor with associated anomalies (obsolete MONDO:0018718)","secondary_identifiers":["Orphanet:458827"],"termid":"MONDO:0018718","xrefs":{"Monarch":{"xref_id":"0018718"}}}


id: MONDO:0022972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetic mastopathy are noncancerous lesions in the breast most commonly diagnosed in premenopausal women with type 1 diabetes. The cause of this condition is unknown. Symptoms may include hard, irregular, easily movable, discrete, painless breast mass(es).","definition_xrefs":["GARD:0008322"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast benign neoplasm","termid":"MONDO:0000620"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetic mastopathy","secondary_identifiers":["MESH:C537524","SCTID:724136006","MEDGEN:419098","UMLS:C2931521"],"synonyms":[{"name":"diabetic fibrous breast disease","type":"related"},{"name":"diabetic fibrous mastopathy","type":"related"},{"name":"lymphocytic mastitis","type":"related"},{"name":"lymphocytic mastopathy","type":"related"},{"name":"sclerosing lymphocytic lobulitis","type":"related"}],"termid":"MONDO:0022972","xrefs":{"Monarch":{"xref_id":"0022972"}}}


id: MONDO:0007255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colorectal cancer (obsolete MONDO:0007255)","termid":"MONDO:0007255","xrefs":{"Monarch":{"xref_id":"0007255"}}}


id: MONDO:0000184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital vitamin K-dependent coagulation factors combined deficiency (obsolete MONDO:0000184)","termid":"MONDO:0000184","xrefs":{"Monarch":{"xref_id":"0000184"}}}


id: MONDO:0002780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0002780 (obsolete MONDO:0002780)","termid":"MONDO:0002780","xrefs":{"Monarch":{"xref_id":"0002780"}}}


id: PBO:0003426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2AF large subunit (U2AF-59)","termid":"PBO:0003426"}


id: GO:1990069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening of stomata, pores in the epidermis of leaves and stems bordered by two guard cells and serving in gas exchange.","definition_xrefs":["PMID:21749899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stomatal movement","termid":"GO:0010118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal opening","termid":"GO:1990069"}


id: MONDO:0020718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital short bowel syndrome","termid":"MONDO:0014097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital short bowel syndrome, autosomal recessive","secondary_identifiers":["OMIM:615237","GARD:18585"],"synonyms":[{"name":"CSBS","type":"broad"},{"name":"congenital short bowel syndrome","type":"broad"},{"name":"congenital short bowel syndrome 1","type":"exact"},{"name":"congenital short bowel syndrome due to CLMP variation","type":"exact"}],"termid":"MONDO:0020718","xrefs":{"Monarch":{"xref_id":"0020718"}}}


id: GO:0048692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axon extension involved in regeneration.","definition_xrefs":["GOC:lm","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of axon extension","termid":"GO:0030517"},{"relation_name":"is_a","term_name":"negative regulation of sprouting of injured axon","termid":"GO:0048688"},{"relation_name":"is_a","term_name":"regulation of axon extension involved in regeneration","termid":"GO:0048690"},{"relation_name":"negatively_regulates","term_name":"axon extension involved in regeneration","termid":"GO:0048677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axon extension involved in regeneration","synonyms":[{"name":"down regulation of axon extension involved in regeneration","type":"exact"},{"name":"down-regulation of axon extension involved in regeneration","type":"exact"},{"name":"downregulation of axon extension involved in regeneration","type":"exact"},{"name":"inhibition of axon extension involved in regeneration","type":"narrow"}],"termid":"GO:0048692"}


id: PBO:0003627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide riboside kinase (predicted)","termid":"PBO:0003627"}


id: FYPO:0006005
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actomyosin contractile ring localization is normal (i.e. indistinguishable from wild type). Actomyosin contractile ring localization is the part of cytokinesis in which the actomyosin contractile ring is assembled and/or maintained in a specific location.","definition_xrefs":["PomBase:mah","GO:1902405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring organization","termid":"FYPO:0007827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal actomyosin contractile ring localization","synonyms":[{"name":"normal actomyosin contractile ring localisation","type":"exact"},{"name":"normal actomyosin contractile ring localization during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring localization during vegetative growth","type":"exact"},{"name":"normal actomyosin contractile ring positioning","type":"exact"},{"name":"normal cytokinetic contractile ring localization","type":"exact"},{"name":"normal mitotic actomyosin contractile ring localization","type":"exact"},{"name":"normal mitotic contractile ring localization","type":"exact"}],"termid":"FYPO:0006005"}


id: GO:0001311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Excision from the chromosome and circularization of DNA molecules encoding ribosomal RNA in dividing cells as they age.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of extrachromosomal circular rDNA by homologous recombination involved in replicative cell aging (obsolete GO:0001311)","synonyms":[{"name":"assembly of extrachromosomal circular rDNA by homologous recombination involved in replicative cell aging","type":"related"},{"name":"formation of extrachromosomal circular rDNA by homologous recombination during replicative cell ageing","type":"related"},{"name":"formation of extrachromosomal circular rDNA by homologous recombination during replicative cell aging","type":"related"},{"name":"formation of extrachromosomal circular ribosomal DNA by homologous recombination during replicative cell aging","type":"related"}],"termid":"GO:0001311"}


id: GO:0106432
data:
  {"annotated_genes":["SJAG_01781","SJAG_02179"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100601,100602],"is_not":false,"summary":null,"term":"GO:0106432"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: queuosine 5'-phosphate + H2O = queuine + D-ribose 5-phosphate.","definition_xrefs":["RHEA:75387","PMID:35940128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleosidase activity","termid":"GO:0008477"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01781":null,"SJAG_02179":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"queuosine nucleosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"queuosine nucleoside glycosylase","type":"exact"},{"name":"tRNA queuosine nucleoside glycosylase","type":"exact"}],"termid":"GO:0106432","terms_by_termid":{"GO:0106432":null}}


id: PBO:0109966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial steroid dehydrogenase","termid":"PBO:0109966"}


id: MONDO:0003063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hydranencephaly (obsolete MONDO:0003063)","termid":"MONDO:0003063","xrefs":{"Monarch":{"xref_id":"0003063"}}}


id: PBO:0064610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 5 homeobox 1","termid":"PBO:0064610"}


id: PBO:0028726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_actin_filament_polymerization_at_cell_tip","termid":"PBO:0028726"}


id: GO:1900199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of directed movement of proteins from the nucleus into the cytoplasm, during anaphase occurring as part of meiosis II.","definition_xrefs":["GOC:al","GOC:TermGenie","PMID:20970342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein export from nucleus","termid":"GO:0046827"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006913"},{"rel_name":"positively_regulates","termid":"GO:0006913"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"positive regulation of protein export from nucleus during meiotic anaphase II","synonyms":[{"name":"positive regulation of protein export from nucleus involved in meiotic anaphase II","type":"broad"}],"termid":"GO:1900199"}


id: GO:0060880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs when a semicircular canal epithelial cell acquires the structural features that allow it to contribute to the process of semicircular canal fusion.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell morphogenesis","termid":"GO:0000902"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"semicircular canal fusion","termid":"GO:0060879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell morphogenesis involved in semicircular canal fusion","termid":"GO:0060880"}


id: PBO:0060810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase core subunit V2 pseudogene 1","termid":"PBO:0060810"}


id: PBO:0068719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 8, pseudogene","termid":"PBO:0068719"}


id: PBO:0075171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 1","termid":"PBO:0075171"}


id: GO:0033033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a myeloid cell apoptotic process.","definition_xrefs":["GOC:add","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of myeloid cell apoptotic process","termid":"GO:0033032"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process","termid":"GO:0043066"},{"relation_name":"negatively_regulates","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of myeloid cell apoptotic process","synonyms":[{"name":"down regulation of myeloid cell apoptosis","type":"exact"},{"name":"down-regulation of myeloid cell apoptosis","type":"exact"},{"name":"downregulation of myeloid cell apoptosis","type":"exact"},{"name":"inhibition of myeloid cell apoptosis","type":"narrow"},{"name":"negative regulation of myeloid cell apoptosis","type":"narrow"}],"termid":"GO:0033033"}


id: GO:0042320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rapid eye movement (REM) sleep.","definition_xrefs":["PMID:11506998","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, REM sleep","termid":"GO:0042747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, REM sleep","synonyms":[{"name":"regulation of REM sleep","type":"exact"}],"termid":"GO:0042320"}


id: GO:0072352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dicarboxylic acids, any organic acid containing three carboxyl (-COOH) groups.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"tricarboxylic acid catabolic process","synonyms":[{"name":"tricarboxylate catabolic process","type":"exact"},{"name":"tricarboxylate catabolism","type":"exact"},{"name":"tricarboxylic acid breakdown","type":"exact"},{"name":"tricarboxylic acid catabolism","type":"exact"},{"name":"tricarboxylic acid degradation","type":"exact"}],"termid":"GO:0072352"}


id: GO:0035577
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding an azurophil granule, a primary lysosomal granule found in neutrophil granulocytes that contains a wide range of hydrolytic enzymes and is released into the extracellular fluid.","definition_xrefs":["GOC:bf","PMID:17152095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal membrane","termid":"GO:0005765"},{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"azurophil granule","termid":"GO:0042582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"azurophil granule membrane","synonyms":[{"name":"primary granule membrane","type":"exact"}],"termid":"GO:0035577"}


id: MONDO:0043280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition caused by degeneration, atrophy, and destruction of the distal part of a nerve fiber's axon and myelin, when continuity with the neural cell nucleus has been severed due to injury. Signs and symptoms include muscle weakness, altered sensation, and limb numbness.","definition_xrefs":["NCIT:C85223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wallerian degeneration","secondary_identifiers":["MEDGEN:12132","MESH:D014855","UMLS:C0043020"],"synonyms":[{"name":"Degeneration, Wallerian","type":"related"},{"name":"Wallerian Degeneration","type":"exact"},{"name":"Wallerian degeneration of the pyramidal tract","type":"related"}],"termid":"MONDO:0043280","xrefs":{"Monarch":{"xref_id":"0043280"}}}


id: PBO:0091715
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human PSMC1","termid":"PBO:0091715"}


id: PBO:0074362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"structural maintenance of chromosomes flexible hinge domain containing 1","termid":"PBO:0074362"}


id: GO:0102400
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 S-adenosyl-L-methionine + dTDP-3-amino-4-dehydro-2,3,6-trideoxy-alpha-D-glucose = 2 S-adenosyl-L-homocysteine + dTDP-3-N,N-dimethylamino-4-oxo-2,3,6-trideoxy-alpha-D-glucose + 2 H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete dTDP-3-amino-4-oxo-2,3,6-trideoxy-alpha-D-glucose N,N-dimethyltransferase activity (obsolete GO:0102400)","termid":"GO:0102400"}


id: PBO:0084953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multistep regulator of cAMP-PKA signaling; inhibits PKA downstream of Gpa2p and Cyr1p, thereby increasing cAMP dependency; promotes ubiquitin-dependent proteolysis of Ira2p; regulated by G-alpha protein Gpa2p; GPB1 has a paralog, GPB2, that arose from the whole genome duplication","termid":"PBO:0084953"}


id: MONDO:0010312
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial ray deficiency, X-linked","secondary_identifiers":["UMLS:C1845717","MEDGEN:337012","OMIM:300378","MESH:C564523"],"synonyms":[{"name":"Rrdx","type":"related"},{"name":"radial ray deficiency","type":"exact"},{"name":"radial ray deficiency, X-linked","type":"exact"}],"termid":"MONDO:0010312","xrefs":{"Monarch":{"xref_id":"0010312"}}}


id: GO:1903935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sodium arsenite stimulus.","definition_xrefs":["GO_REF:0000071","GOC:TermGenie","PMID:18674524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to arsenic-containing substance","termid":"GO:0046685"},{"relation_name":"is_a","term_name":"response to salt","termid":"GO:1902074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sodium arsenite","termid":"GO:1903935"}


id: GO:0070205
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-enolpyruvoyl-6-hydroxy-2-succinyl-cyclohex-3-ene-1-carboxylate = (1R,6R)-2-succinyl-6-hydroxycyclohexa-2,4-diene-1-carboxylate + pyruvate.","definition_xrefs":["RHEA:25597","EC:4.2.99.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase activity","secondary_identifiers":["KEGG_REACTION:R08166","MetaCyc:RXN-9310"],"synonyms":[{"name":"2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylic acid synthase activity","type":"related"},{"name":"6-hydroxy-2-succinylcyclohexa-2,4-diene-1-carboxylate synthase activity","type":"related"},{"name":"MenH","type":"related"},{"name":"SHCHC synthase activity","type":"related"},{"name":"YfbB","type":"related"}],"termid":"GO:0070205"}


id: MOD:00833
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-asparagine residue to N4-glucosyl-asparagine.","definition_xrefs":["PubMed:1569073","PubMed:3410849","RESID:AA0421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosylated residue","termid":"MOD:00433"},{"relation_name":"is_a","term_name":"monohexosylated (Hex1)","termid":"MOD:00761"},{"relation_name":"is_a","term_name":"N4-hexosylated asparagine","termid":"MOD:01346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"N4-glucosyl-L-asparagine","synonyms":[{"name":"(2S)-2-amino-4-(D-glucopyranosyl)amino-4-oxobutanoic acid","type":"exact"},{"name":"CARBOHYD N-linked (Glc)","type":"exact"},{"name":"CARBOHYD N-linked (Glc) asparagine","type":"exact"},{"name":"N4-(D-glucopyranosyl)-L-asparagine","type":"exact"},{"name":"N4-asparagine-glucoside","type":"exact"},{"name":"N4-glucosyl-L-asparagine","type":"exact"},{"name":"N4-glucosylasparagine","type":"exact"},{"name":"N4-glycosyl-L-asparagine","type":"exact"},{"name":"N4-glycosylasparagine","type":"exact"},{"name":"N4GlcAsn","type":"exact"}],"termid":"MOD:00833"}


id: PBO:0042880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 210","termid":"PBO:0042880"}


id: MONDO:0011059
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly-craniosynostosis syndrome is a rare developmental defect during embryogenesis syndrome characterized by the association of primary craniosynostosis (usually involving the coronal and metopic sutures) with holoprosencephaly (ranging from alobar to, most commonly, semilobar) and various skeletal anomalies (typically, hand and feet anomalies including fifth digit clinodactyly, hypoplastic phalanges and cone-shaped epiphyses, small vertebral bodies, scoliosis, coxa valga and/or flexion deformities of hips). Craniofacial asymmetry, microcephaly, brachy/plagiocephaly, short stature and psychomotor delay are additional common features.","definition_xrefs":["Orphanet:2163"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"holoprosencephaly-craniosynostosis syndrome","secondary_identifiers":["GARD:2454","MEDGEN:330464","OMIM:601370","SCTID:715434005","UMLS:C1832424","MESH:C537684","ICD10CM:Q04.2"],"synonyms":[{"name":"Camero-Lituania-Cohen syndrome","type":"exact"},{"name":"Genoa syndrome","type":"exact"},{"name":"Semilobar holoprosencephaly and primary craniosynostosis","type":"related"},{"name":"camera Lituania Cohen syndrome","type":"related"},{"name":"holoprosencephaly craniosynostosis","type":"related"},{"name":"holoprosencephaly, SEMILOBAR, with craniosynostosis","type":"related"}],"termid":"MONDO:0011059","xrefs":{"Monarch":{"xref_id":"0011059"}}}


id: MONDO:0012548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kostmann syndrome is a rare, severe, congenital neutropenia disorder characterized by a lack of mature neutrophils (absolute neutrophil counts less than 500 cells/mm3) associated with frequent, recurrent bacterial infections (e.g. otitis media, pneumonia, sinusitis, urinary tract infections, abscesses of skin and/or liver) and increased promyelocytes in the bone marrow. Periodontal disease, as well as neurological symptoms, such as cognitive impairment, severe neurodegeneration and epilepsy, have been reported in some patients.","definition_xrefs":["Orphanet:99749"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"autosomal recessive severe congenital neutropenia","termid":"MONDO:0028226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"Kostmann syndrome","secondary_identifiers":["OMIM:610738","GARD:302","MESH:C537592","UMLS:C5235141","NCIT:C166153","MEDGEN:1713491","DOID:0112133","icd11.foundation:421553273"],"synonyms":[{"name":"Kostmann disease","type":"related"},{"name":"SCN3","type":"related"},{"name":"agranulocytosis infantile","type":"related"},{"name":"agranulocytosis, infantile","type":"related"},{"name":"infantile agranulocytosis","type":"exact"},{"name":"neutropenia, severe congenital 3, autosomal recessive","type":"exact"},{"name":"neutropenia, severe congenital, 3, autosomal recessive","type":"related"},{"name":"severe congenital neutropenia autosomal recessive 3","type":"related"},{"name":"severe congenital neutropenia type 3","type":"exact"}],"termid":"MONDO:0012548","xrefs":{"Monarch":{"xref_id":"0012548"}}}


id: PBO:0001456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone Chz1 (predicted)","termid":"PBO:0001456"}


id: PR:O94651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A syntaxin-12 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02377","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syntaxin pep12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.04","secondary_identifiers":["UniProtKB:O94651"],"synonyms":[{"name":"Spom972h-STX12","type":"exact"}],"termid":"PR:O94651"}


id: MONDO:0008510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Symphalangism with multiple anomalies of hands and feet is an exceedingly rare syndrome described in one family and characterized by proximal symphalangism and multiple hand and feet disorders (syndactyly, clinodactyly, hypoplasia of the thenar and hypothenar eminences, and a distinctive dermatoglyphic pattern). There have been no further descriptions in the literature since 1981.","definition_xrefs":["Orphanet:3246"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symphalangism","termid":"MONDO:0000151"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism with multiple anomalies of hands and feet","secondary_identifiers":["UMLS:C1861391","GARD:5077","OMIM:185750","SCTID:732955001","MEDGEN:348859","MESH:C566098"],"synonyms":[{"name":"Learman syndrome","type":"exact"},{"name":"symphalangism with multiple anomalies of hands and feet","type":"exact"}],"termid":"MONDO:0008510","xrefs":{"Monarch":{"xref_id":"0008510"}}}


id: PBO:0065774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaminyl-peptide cyclotransferase like","termid":"PBO:0065774"}


id: MONDO:0001279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises from the spinal meninges.","definition_xrefs":["NCIT:C5134"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraspinal meningioma","secondary_identifiers":["DOID:1140","MEDGEN:272774","UMLS:C1334264"],"synonyms":[{"name":"intraspinal meningioma","type":"exact"},{"name":"meningioma of spinal canal and spinal cord","type":"exact"},{"name":"meningioma of the spinal canal and spinal cord","type":"exact"},{"name":"spinal canal and spinal cord meningioma","type":"exact"}],"termid":"MONDO:0001279","xrefs":{"Monarch":{"xref_id":"0001279"}}}


id: PBO:0073631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 16","termid":"PBO:0073631"}


id: PBO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"19S proteasome regulatory subunit Rpt5 (predicted)","termid":"PBO:0002056"}


id: MONDO:0003962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Froelich syndrome is characterized by obesity and hypogonadism due to a hypothalamic-pituitary disorder. The hypothalamus is a part of the brain where certain functions such as sleep cycles and body temperature are regulated. The pituitary is a gland that makes hormones that affect growth and the functions of other glands in the body. Froehlich syndrome is acquired(i.e., not thought to be inherited or genetic). This syndrome appears to affect males more commonly. The term 'Froelich syndrome' is rarely used today.","direct_ancestors":[{"relation_name":"is_a","term_name":"hypothalamic disorder","termid":"MONDO:0002150"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Froelich syndrome","secondary_identifiers":["SCTID:62999006","NCIT:C34625","MEDGEN:4795","UMLS:C0016724","DOID:6676","ICD9:253.8"],"synonyms":[{"name":"Adiposodysgenesis","type":"related"},{"name":"Babinski-Froelich syndrome","type":"exact"},{"name":"Froehlich syndrome","type":"exact"},{"name":"Froehlich's syndrome","type":"exact"},{"name":"Froelich's adiposity","type":"related"},{"name":"Froelich's syndrome","type":"exact"},{"name":"Frohlich syndrome","type":"exact"},{"name":"Frohlich's syndrome","type":"exact"},{"name":"Frolich's syndrome","type":"exact"},{"name":"Fröhlich syndrome","type":"exact"},{"name":"Launois-Cleret syndrome","type":"exact"},{"name":"adiposogenital dystrophy","type":"related"},{"name":"adiposogenital syndrome","type":"exact"},{"name":"dystrophia Adiposogenitalis","type":"exact"},{"name":"hypothalamic infantilism-obesity","type":"exact"},{"name":"sexual infantilism","type":"exact"}],"termid":"MONDO:0003962","xrefs":{"Monarch":{"xref_id":"0003962"}}}


id: PBO:0002072
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.4.1.15","termid":"PBO:0002072"}


id: GO:0044688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydro-D-neopterin 2',3'-cyclic phosphate + H2O = 7,8-dihydroneopterin 3'-phosphate + H+.","definition_xrefs":["GOC:mengo_curators","PMID:19746965"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"7,8-dihydro-D-neopterin 2',3'-cyclic phosphate phosphodiesterase activity","termid":"GO:0044688"}


id: PBO:0091770
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"The Bioneer strain does not appear contain a deletion","termid":"PBO:0091770"}


id: GO:0047769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate = L-phenylalanine + H2O + CO2.","definition_xrefs":["EC:4.2.1.91"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"arogenate dehydratase activity","secondary_identifiers":["RHEA:12536","MetaCyc:CARBOXYCYCLOHEXADIENYL-DEHYDRATASE-RXN"],"synonyms":[{"name":"L-arogenate hydro-lyase (decarboxylating)","type":"related"},{"name":"L-arogenate hydro-lyase (decarboxylating; L-phenylalanine-forming)","type":"related"},{"name":"carboxycyclohexadienyl dehydratase activity","type":"exact"}],"termid":"GO:0047769"}


id: PBO:0053604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 636","termid":"PBO:0053604"}


id: GO:0018502
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,5-dichloro-2,5-cyclohexadiene-1,4-diol + NAD+ = NADH + H+ + 2,5-dichlorohydroquinone.","definition_xrefs":["UM-BBD_reactionID:r0553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,5-dichloro-2,5-cyclohexadiene-1,4-diol dehydrogenase activity","secondary_identifiers":["RHEA:15741","MetaCyc:LINC-RXN"],"termid":"GO:0018502"}


id: MONDO:0007100
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0971004"}]},"cv_name":"mondo","definition":"A rare genetic systemic disease characterized by adult onset, progressive sensorimotor and autonomic neuropathy and infiltrative cardiomyopathy. Neurological involvement usually starts with sensory loss in the extremities and progresses with motor neuropathy. Cardiomyopathy presents with rhythm abnormalities and heart failure. The disease also frequently manifests with a range of additional clinical signs and symptoms due to associated ocular, renal, central nervous system and gastrointestinal involvement.","definition_xrefs":["Orphanet:271861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary amyloidosis","termid":"MONDO:0018634"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021179"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"familial amyloid neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1201060","EFO:0004129","NCIT:C84554","OMIMPS:105210","MEDGEN:104815","ICD10EXP:G63.3*","ICD9:277.39","ICD10EXP:E85.1+","GARD:21017","SCTID:42295001","NANDO:1200214","MESH:C567782","DOID:0050761","DOID:0050638","UMLS:C0206245","icd11.foundation:807065795"],"synonyms":[{"name":"ATTRv amyloidosis","type":"exact"},{"name":"Corino de Andrade's disease","type":"exact"},{"name":"TTR amyloidosis","type":"exact"},{"name":"amyloid neuropathies, familial","type":"exact"},{"name":"amyloidosis, hereditary, transthyretin-related","type":"exact"},{"name":"familial TTR-related amyloidosis","type":"exact"},{"name":"familial amyloid neuropathy","type":"exact"},{"name":"familial amyloid polyneuropathy","type":"exact"},{"name":"familial transthyretin amyloidosis","type":"exact"},{"name":"familial transthyretin-related amyloidosis","type":"exact"},{"name":"hATTR","type":"exact"},{"name":"hereditary TTR amyloid polyneuropathy","type":"exact"},{"name":"hereditary TTR amyloidosis","type":"exact"},{"name":"hereditary amyloidosis, transthyretin-related","type":"related"},{"name":"hereditary transthyretin amyloid polyneuropathy","type":"exact"},{"name":"paramyloidosis","type":"exact"},{"name":"transthyretin-related hereditary amyloidosis","type":"exact"}],"termid":"MONDO:0007100","terms_by_termid":{"MONDO:0971004":null},"xrefs":{"Monarch":{"xref_id":"0007100"}}}


id: PBO:0050335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 37","termid":"PBO:0050335"}


id: PBO:0064851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 14B pseudogene 2","termid":"PBO:0064851"}


id: GO:1902907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a proteasome storage granule into its constituent components.","definition_xrefs":["PMID:23690178","GOC:di","GOC:TermGenie","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proteasome storage granule disassembly","synonyms":[{"name":"PSG disassembly","type":"related"}],"termid":"GO:1902907"}


id: PBO:0081017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 48","termid":"PBO:0081017"}


id: PR:O74840
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cue2 gene.","definition_xrefs":["UniProtKB:O74840","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Smr domain-containing protein C1235.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1235.03","synonyms":[{"name":"Spom972h-cue2","type":"exact"}],"termid":"PR:O74840"}


id: GO:1901266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cephalosporin C.","definition_xrefs":["UniPathway:UPA00172","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"cephalosporin metabolic process","termid":"GO:0043645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cephalosporin C metabolic process","synonyms":[{"name":"cephalosporin C metabolism","type":"exact"}],"termid":"GO:1901266"}


id: MONDO:0007114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of acromelic dysplasia characterized by the distinctive radiological sign of angel-shaped middle phalanges, a typical metacarpophalangeal pattern profile (mainly affecting first metacarpals and middle phalanges of second, third and fifth digits, which all appear short), epiphyseal changes in the hips and, in some, abnormal dentition and delayed bone age.","definition_xrefs":["Orphanet:63442"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Angel-shaped phalango-epiphyseal dysplasia","secondary_identifiers":["OMIM:105835","GARD:671","SCTID:720984008","icd11.foundation:1095628863","MESH:C536361","MEDGEN:366028","MedDRA:10066017","UMLS:C1739384"],"synonyms":[{"name":"ASPED","type":"exact"},{"name":"Angel shaped phalangoepiphyseal dysplasia","type":"related"},{"name":"Angel-shaped phalangoepiphyseal dysplasia","type":"related"}],"termid":"MONDO:0007114","xrefs":{"Monarch":{"xref_id":"0007114"}}}


id: GO:0002828
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune response","termid":"GO:0050776"},{"relation_name":"regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of type 2 immune response","synonyms":[{"name":"regulation of T-helper 2 type immune response","type":"narrow"},{"name":"regulation of Th2 immune response","type":"narrow"}],"termid":"GO:0002828"}


id: MOD:00753
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a chlorine atom for a hydrogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chlorinated residue","synonyms":[{"name":"ClRes","type":"exact"}],"termid":"MOD:00753"}


id: PBO:0041784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAPS2 antisense RNA 1","termid":"PBO:0041784"}


id: PBO:0084841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the large subunit; appears as two protein spots (YmL34 and YmL38) on two-dimensional SDS gels; protein abundance increases in response to DNA replication stress","termid":"PBO:0084841"}


id: GO:0007168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses guanylyl cyclase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:signaling","PMID:16815030","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"receptor guanylyl cyclase signaling pathway","synonyms":[{"name":"receptor guanylyl cyclase signalling pathway","type":"exact"}],"termid":"GO:0007168"}


id: MONDO:1012953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neurodegenerative disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953","xrefs":{"Monarch":{"xref_id":"1012953"}}}


id: GO:1900075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neuromuscular synaptic transmission.","definition_xrefs":["GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"regulation of neuromuscular synaptic transmission","termid":"GO:1900073"},{"relation_name":"positively_regulates","term_name":"neuromuscular synaptic transmission","termid":"GO:0007274"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of neuromuscular synaptic transmission","synonyms":[{"name":"activation of neuromuscular synaptic transmission","type":"related"},{"name":"up regulation of neuromuscular synaptic transmission","type":"related"},{"name":"up-regulation of neuromuscular synaptic transmission","type":"related"},{"name":"upregulation of neuromuscular synaptic transmission","type":"related"}],"termid":"GO:1900075"}


id: PBO:0040145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anti-silencing function 1B histone chaperone","termid":"PBO:0040145"}


id: PBO:0084536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of the NineTeen Complex (NTC); this complex contains Prp19p and stabilizes U6 snRNA in catalytic forms of the spliceosome containing U2, U5, and U6 snRNAs; interacts physically and genetically with Prp19p","termid":"PBO:0084536"}


id: FYPO:0002033
data:
  {"alleles_by_uniquename":{"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121292],"is_not":false,"summary":null,"term":"FYPO:0002033"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"abolished protein phosphorylation","termid":"FYPO:0002678"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abolished protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_04551"],"single_locus_genotype_uniquenames":["Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"abolished protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"protein phosphorylation abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0002033","terms_by_termid":{"FYPO:0002033":null}}


id: GO:2000130
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of octopamine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of octopamine or tyramine signaling pathway","termid":"GO:2000127"},{"relation_name":"is_a","term_name":"regulation of octopamine signaling pathway","termid":"GO:2000128"},{"relation_name":"positively_regulates","term_name":"octopamine signaling pathway","termid":"GO:0071927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of octopamine signaling pathway","synonyms":[{"name":"positive regulation of octopamine signalling pathway","type":"exact"}],"termid":"GO:2000130"}


id: PBO:0001350
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"swi5delta rhp57delta double mutant produced each recombination class (gene conversion, crossover and long tract gene conversion) at frequencies similar to that of the rhp51delta single mutant","termid":"PBO:0001350"}


id: PBO:0075629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 1A","termid":"PBO:0075629"}


id: PATO:0000044
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality which inheres in a bearer by virtue of the number of the bearer's repetitive actions in a particular time.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/frequency"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rate","termid":"PATO:0000161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frequency","termid":"PATO:0000044"}


id: PBO:0046031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit alpha","termid":"PBO:0046031"}


id: GO:0050555
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: (R)-2-hydroxypropyl-CoM = H-S-CoM + (R)-1,2-epoxypropane, and (S)-2-hydroxypropyl-CoM = H-S-CoM + (S)-1,2-epoxypropane.","definition_xrefs":["EC:4.4.1.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"2-hydroxypropyl-CoM lyase activity","secondary_identifiers":["UM-BBD_enzymeID:r0851","UM-BBD_enzymeID:r0858","MetaCyc:4.2.99.19-RXN"],"synonyms":[{"name":"(R)-2-hydroxypropyl-CoM 2-mercaptoethanesulfonate lyase (cyclizing; epoxyalkane-ring-forming)","type":"related"},{"name":"(R)-[or (S)-]2-hydroxypropyl-CoM:2-mercaptoethanesulfonate lyase (epoxyalkane-ring-forming)","type":"related"},{"name":"2-hydroxypropyl-CoM:2-mercaptoethanesulfonate lyase (epoxyalkane-ring-forming)","type":"related"},{"name":"EaCoMT activity","type":"related"},{"name":"coenzyme M-epoxyalkane ligase activity","type":"related"},{"name":"epoxyalkane:2-mercaptoethanesulfonate transferase activity","type":"related"},{"name":"epoxyalkane:CoM transferase activity","type":"related"},{"name":"epoxyalkane:coenzyme M transferase activity","type":"related"},{"name":"epoxyalkyl:CoM transferase activity","type":"related"},{"name":"epoxypropane:coenzyme M transferase activity","type":"related"},{"name":"epoxypropyl:CoM transferase activity","type":"related"}],"termid":"GO:0050555"}


id: GO:0038039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains two G protein-coupled receptors (GPCRs) of different subtypes. Formation of a GPCR heterodimer may alter the functional property of the GPCR.","definition_xrefs":["GOC:bf","PMID:16109836","GOC:al","PMID:20150590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor dimeric complex","termid":"GO:0038037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G protein-coupled receptor heterodimeric complex","synonyms":[{"name":"G-protein coupled receptor heterodimer","type":"exact"},{"name":"G-protein coupled receptor heterodimeric complex","type":"exact"},{"name":"GPCR heterodimer","type":"exact"}],"termid":"GO:0038039"}


id: FYPO:0006918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm is abolished during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleoplasm","termid":"FYPO:0002531"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus during mitotic interphase","termid":"FYPO:0004753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to nucleoplasm during mitotic interphase","synonyms":[{"name":"abolished protein localisation to nucleoplasm during mitotic interphase","type":"exact"},{"name":"abolished protein localization to nucleoplasm during interphase of mitotic cell cycle","type":"related"},{"name":"abolished protein localization to nucleoplasm during mitotic interphase during vegetative growth","type":"exact"},{"name":"protein localization to nucleoplasm abolished during mitotic interphase","type":"exact"}],"termid":"FYPO:0006918"}


id: GO:0003861
data:
  {"annotated_genes":["SJAG_03243"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59938],"is_not":false,"summary":null,"term":"GO:0003861"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-3-isopropylmalate = (2S)-2-isopropylmalate.","definition_xrefs":["EC:4.2.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"3-isopropylmalate dehydratase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["RHEA:32287","MetaCyc:3-ISOPROPYLMALISOM-RXN"],"synonyms":[{"name":"(2R,3S)-3-isopropylmalate hydro-lyase (2-isopropylmaleate-forming)","type":"related"},{"name":"(2R,3S)-3-isopropylmalate hydro-lyase activity","type":"related"},{"name":"alpha-IPM isomerase activity","type":"related"},{"name":"alpha-isopropylmalate isomerase activity","type":"related"},{"name":"beta-isopropylmalate dehydratase activity","type":"related"},{"name":"isopropylmalate isomerase activity","type":"related"}],"termid":"GO:0003861","terms_by_termid":{"GO:0003861":null}}


id: GO:1905442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chondroitin 4'-sulfate stimulus.","definition_xrefs":["GO_REF:0000071","PMID:22365850","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to chondroitin 4'-sulfate","termid":"GO:1905441"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chondroitin 4'-sulfate","termid":"GO:1905442"}


id: MONDO:0007603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Felty syndrome (FS), also known as ''super rheumatoid'' disease, is a severe form of rheumatoid arthritis (RA), characterized by a triad of RA, splenomegaly and neutropenia, resulting in susceptibility to bacterial infections.","definition_xrefs":["Orphanet:47612"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatoid arthritis","termid":"MONDO:0008383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Felty syndrome","secondary_identifiers":["DOID:11042","EFO:0007269","ICD10CM:M05.0","ICD9:714.1","NORD:1135","GARD:8234","MEDGEN:4674","MedDRA:10016386","MESH:D005258","OMIM:134750","NCIT:C84712","UMLS:C0015773","SCTID:57160007"],"synonyms":[{"name":"Felty syndrome","type":"exact"},{"name":"Felty's syndrome","type":"exact"},{"name":"familial Felty's syndrome","type":"related"},{"name":"rheumatoid arthritis with splenoadenomegaly and leukopenia","type":"exact"},{"name":"rheumatoid arthritis, splenomegaly and neutropenia","type":"related"},{"name":"splenomegaly-neutropenia-rheumatoid arthritis syndrome","type":"exact"}],"termid":"MONDO:0007603","xrefs":{"Monarch":{"xref_id":"0007603"}}}


id: MONDO:0005817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kluver Bucy syndrome is a rare behavioral impairment characterized by inappropriate sexual behaviors and mouthing of objects. Other signs and symptoms include diminished ability to visually recognize objects,loss of normal fear and anger responses, memory loss, distractibility, seizures, and dementia. It is associated with damage to the anterior temporal lobes of the brain. Cases have been reported in association with herpes encephalitis and head trauma. Treatment is symptomatic and may include the use of psychotropic medications.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"mental disorder","termid":"MONDO:0005084"},{"relation_name":"is_a","term_name":"impulse control disorder","termid":"MONDO:0001162"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"infectious encephalitis","termid":"MONDO:0020067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kluver-Bucy syndrome","secondary_identifiers":["EFO:0007335","MESH:D020232","MedDRA:10066431","Orphanet:157823","DOID:2510","GARD:6840","NORD:1338","MEDGEN:124361","NCIT:C84802","UMLS:C0270707","MONDO:0015527","SCTID:10651001"],"synonyms":[{"name":"KLuever-Bucy syndrome","type":"related"},{"name":"KLüver-Bucy syndrome","type":"exact"},{"name":"Kluver Bucy syndrome","type":"related"},{"name":"Klver-Bucy syndrome","type":"exact"},{"name":"bilateral temporal lobe disorder","type":"related"},{"name":"memory loss, extreme sexual behavior, placidity, and visual distractibility","type":"related"},{"name":"post-encephalitic Kluver Bucy syndrome (type)","type":"related"},{"name":"post-traumatic Kluver Bucy syndrome (type)","type":"related"},{"name":"syndrome, Kluver-Bucy","type":"related"},{"name":"temporal lobectomy behavior syndrome","type":"related"},{"name":"temporal lobectomy behaviour syndrome","type":"related"}],"termid":"MONDO:0005817","xrefs":{"Monarch":{"xref_id":"0005817"}}}


id: PBO:0062819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoclast associated Ig-like receptor","termid":"PBO:0062819"}


id: MOD:00142
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between a cysteine residue and the tetrapyrrole compound phytochromobilin.","definition_xrefs":["PubMed:16593380","ChEBI:15619","Unimod:389#C","PubMed:3208761","RESID:AA0133","PubMed:1634523","PubMed:7918400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole modified residue","termid":"MOD:00700"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-phytochromobilin-L-cysteine","synonyms":[{"name":"(2R,3R)-3-[(1R)-1-(((2R)-2-amino-2-carboxy)ethylsulfanyl)ethyl]-8,12-bis(2-carboxyethyl)-18-ethyl-2,7,13,17-tetramethyl-1,2,3,19,21,22,24-heptahydrobilin-1,19(21H,22H,24H)-dione","type":"exact"},{"name":"18-ethenyl-3-[1-((2-amino-2-carboxy)ethylsulfanyl)ethyl]-1,2,3,19,22,24-hexahydro-2,7,13,17-tetramethyl-1,19-dioxo-21H-biline-8,12-dipropanoic acid","type":"exact"},{"name":"BINDING Phytochromobilin chromophore (covalent; via 1 link)","type":"exact"},{"name":"Phytochromobilin","type":"related"},{"name":"S-phytochromobilin-L-cysteine","type":"exact"},{"name":"phytochrome chromophore","type":"exact"},{"name":"phytochromobilin","type":"related"},{"name":"phytochromobilin cysteine adduct","type":"exact"}],"termid":"MOD:00142"}


id: GO:0019532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of oxalate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Oxalate, or ethanedioic acid, occurs in many plants and is highly toxic to animals.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"oxalate transport","synonyms":[{"name":"ethanedioate transport","type":"exact"},{"name":"ethanedioic acid transport","type":"exact"},{"name":"oxalic acid transport","type":"exact"}],"termid":"GO:0019532"}


id: GO:0044048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance secreted by the other (symbiont) organism via a type V secretion system. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host via protein secreted by type V secretion system (obsolete GO:0044048)","termid":"GO:0044048"}


id: MONDO:0000955
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the ileum","direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"ileal neoplasm","termid":"MONDO:0006801"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"ileum cancer","secondary_identifiers":["NCIT:C193425","UMLS:C0345836","ICD10CM:C17.2","MEDGEN:83390","DOID:10153","ICD9:152.2"],"synonyms":[{"name":"cancer of ileum","type":"exact"},{"name":"ileum cancer","type":"exact"},{"name":"malignant ileum neoplasm","type":"exact"},{"name":"malignant neoplasm of ileum","type":"exact"}],"termid":"MONDO:0000955","xrefs":{"Monarch":{"xref_id":"0000955"}}}


id: GO:0035307
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of removal of phosphate groups from a protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein dephosphorylation (obsolete GO:0035307)","synonyms":[{"name":"activation of protein amino acid dephosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"stimulation of protein amino acid dephosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid dephosphorylation","type":"exact"},{"name":"upregulation of protein amino acid dephosphorylation","type":"exact"}],"termid":"GO:0035307"}


id: PBO:0080615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 49","termid":"PBO:0080615"}


id: PBO:0109054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIB1 associated lncRNA","termid":"PBO:0109054"}


id: PBO:0076139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate-CoA ligase GDP/ADP-forming subunit alpha","termid":"PBO:0076139"}


id: MOD:01647
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively removes or replaces an L-threonine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"natural, standard, encoded residue removal","termid":"MOD:01651"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-threonine removal","termid":"MOD:01647"}


id: PBO:0084443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Maltose permease; high-affinity maltose transporter (alpha-glucoside transporter); encoded in the MAL3 complex locus; member of the 12 transmembrane domain superfamily of sugar transporters; functional in genomic reference strain S288C","termid":"PBO:0084443"}


id: PBO:0062771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Y member 1 pseudogene","termid":"PBO:0062771"}


id: PBO:0055157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2576","termid":"PBO:0055157"}


id: PBO:0063583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PET100 cytochrome c oxidase chaperone","termid":"PBO:0063583"}


id: PBO:0077548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 256 pseudogene 1","termid":"PBO:0077548"}


id: GO:0017083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-beta-L-fucose + beta-D-galactosyl-(1,4)-N-acetyl-D-glucosaminyl-R = GDP + 1,4-beta-D-galactosyl-(1,4)-[alpha-L-fucosyl-(1,3)]-N-acetyl-D-glucosaminyl-R.","definition_xrefs":["EC:2.4.1.152","RHEA:14257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-(1->3)-fucosyltransferase activity","termid":"GO:0046920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"4-galactosyl-N-acetylglucosaminide 3-alpha-L-fucosyltransferase activity","secondary_identifiers":["MetaCyc:GALACTOSIDE-3-FUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"GDP-L-fucose:1,4-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 3-L-fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:1,4-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 3-L-fucosyltransferase activity","type":"related"},{"name":"GDP-beta-L-fucose:1,4-beta-D-galactosyl-N-acetyl-D-glucosaminyl-R 3-alpha-L-fucosyltransferase activity","type":"related"},{"name":"Lewis-negative alpha-3-fucosyltransferase activity","type":"narrow"},{"name":"galactoside 3-L-fucosyltransferase activity","type":"exact"},{"name":"galactoside 3-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glucoside alpha-1->3-fucosyltransferase activity","type":"related"},{"name":"guanosine diphosphofucose-glucoside alpha1->3-fucosyltransferase activity","type":"related"},{"name":"plasma alpha-3-fucosyltransferase activity","type":"narrow"}],"termid":"GO:0017083"}


id: PBO:0052482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch domain containing 8A","termid":"PBO:0052482"}


id: FYPO:0002943
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid, and has a larger volume than normal, when the cell undergoes transition from G0 phase to G1. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swollen spheroid cell","termid":"FYPO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"swollen spheroid cell during G0 to G1 transition","synonyms":[{"name":"enlarged spheroid cell during G0 to G1 transition","type":"related"},{"name":"enlarged volume spheroid cell during G0 to G1 transition","type":"exact"},{"name":"large spheroid cell during G0 to G1 transition","type":"related"},{"name":"spheroid cell with increased cell size during G0 to G1 transition","type":"related"},{"name":"spheroid cell with increased cell volume during G0 to G1 transition","type":"exact"},{"name":"swollen rounded cell during G0 to G1 transition","type":"exact"},{"name":"swollen spheroid cell during cell cycle re-entry","type":"exact"},{"name":"swollen spheroid cell during cell quiescence to G1 transition","type":"exact"},{"name":"swollen spheroid cell during exit from cell quiescence","type":"exact"},{"name":"swollen spheroid cell during quiescence to G1 transition","type":"exact"},{"name":"swollen spheroid cell during recovery from quiescence","type":"exact"}],"termid":"FYPO:0002943"}


id: GO:0047251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylthioacetohydroximate + UDP-D-glucose = desulfoglucotropeolin + UDP.","definition_xrefs":["EC:2.4.1.195"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiohydroximate beta-D-glucosyltransferase activity","secondary_identifiers":["RHEA:13757","MetaCyc:2.4.1.195-RXN"],"synonyms":[{"name":"N-hydroxythioamide S-beta-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:N-hydroxy-2-phenylethanethioamide S-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:thiohydroximate S-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPG:thiohydroximate glucosyltransferase activity","type":"related"},{"name":"desulfoglucosinolate-uridine diphosphate glucosyltransferase activity","type":"related"},{"name":"thiohydroximate S-glucosyltransferase activity","type":"related"},{"name":"thiohydroximate glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-thiohydroximate glucosyltransferase activity","type":"related"}],"termid":"GO:0047251"}


id: PR:O14092
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-aminolevulinate synthase, erythroid-specific, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13693:SF7","OMA:SCHPO01637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-aminolevulinate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F3.09","secondary_identifiers":["UniProtKB:O14092"],"synonyms":[{"name":"5-aminolevulinic acid synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ALAS2","type":"exact"},{"name":"delta-ALA synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"delta-aminolevulinate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14092"}


id: PBO:0060182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 3A, cell surface associated","termid":"PBO:0060182"}


id: SO:0002088
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript variant occurring within the splice region (1-3 bases of the exon or 3-8 bases of the intron) of a non coding transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non_coding_transcript_variant","termid":"SO:0001619"},{"relation_name":"is_a","term_name":"splice_region_variant","termid":"SO:0001630"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non_coding_transcript_splice_region_variant","synonyms":[{"name":"ANNOVAR:ncRNA_splicing","type":"narrow"}],"termid":"SO:0002088"}


id: PBO:0056459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAS1 proto-oncogene like, G protein-coupled receptor","termid":"PBO:0056459"}


id: PBO:0075005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-16","termid":"PBO:0075005"}


id: PBO:0059011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane metalloendopeptidase like 1","termid":"PBO:0059011"}


id: GO:0021616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the glossopharyngeal nerve. This process pertains to the initial formation of a structure from unspecified parts. Various sensory and motor branches of the glossopharyngeal nerve supply nerve connections to the pharynx and back of the tongue. The branchial motor component contains motor fibers that innervate muscles that elevate the pharynx and larynx, and the tympanic branch supplies parasympathetic fibers to the otic ganglion.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","ISBN:0838580343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve formation","termid":"GO:0021603"},{"relation_name":"part_of","term_name":"glossopharyngeal nerve morphogenesis","termid":"GO:0021615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glossopharyngeal nerve formation","synonyms":[{"name":"CN IX biosynthesis","type":"related"},{"name":"CN IX formation","type":"related"}],"termid":"GO:0021616"}


id: GO:0052605
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,3-dimethyl-6-phytyl-1,4-benzoquinone = gamma-tocopherol.","definition_xrefs":["PMID:12213958"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-tocopherol cyclase activity (obsolete GO:0052605)","termid":"GO:0052605"}


id: GO:0010779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of DNA proceeding from the broken 3' single-strand DNA end that uses the homologous intact duplex as the template resulting in meiotic gene conversion. Meiotic gene conversion is the cell cycle process in which genetic information is transferred from one helix to another.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA repair synthesis","termid":"GO:0000711"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0007049","GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"meiotic DNA repair synthesis involved in meiotic gene conversion","termid":"GO:0010779"}


id: GO:1901594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a capsazepine stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to capsazepine","termid":"GO:1901594"}


id: GO:1901610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vesicle transport along microtubule.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of vesicle transport along microtubule","termid":"GO:1901608"},{"relation_name":"positively_regulates","term_name":"vesicle transport along microtubule","termid":"GO:0047496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of vesicle transport along microtubule","synonyms":[{"name":"activation of microtubule-based vesicle localization","type":"exact"},{"name":"activation of vesicle transport along microtubule","type":"narrow"},{"name":"positive regulation of microtubule-based vesicle localization","type":"exact"},{"name":"up regulation of microtubule-based vesicle localization","type":"exact"},{"name":"up regulation of vesicle transport along microtubule","type":"exact"},{"name":"up-regulation of microtubule-based vesicle localization","type":"exact"},{"name":"up-regulation of vesicle transport along microtubule","type":"exact"},{"name":"upregulation of microtubule-based vesicle localization","type":"exact"},{"name":"upregulation of vesicle transport along microtubule","type":"exact"}],"termid":"GO:1901610"}


id: PBO:0036393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein; involved in phospholipid metabolism Ups2 (predicted)","termid":"PBO:0036393"}


id: PBO:0059922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 8","termid":"PBO:0059922"}


id: PBO:0043052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHP1 pseudogene 2","termid":"PBO:0043052"}


id: GO:0050847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by a progesterone binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:14744870"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"progesterone receptor signaling pathway","synonyms":[{"name":"intracellular progesterone receptor signaling pathway","type":"exact"},{"name":"nuclear receptor-mediated progesterone signaling pathway","type":"exact"},{"name":"progesterone receptor signalling pathway","type":"exact"}],"termid":"GO:0050847"}


id: PATO:0002297
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular motility which is lower relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"cellular motility","termid":"PATO:0001488"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased cellular motility","termid":"PATO:0002297"}


id: PBO:0059382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S21 pseudogene 7","termid":"PBO:0059382"}


id: SO:0000245
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000245 mRNA_by_polyadenylation_status (obsolete SO:0000245)","termid":"SO:0000245"}


id: MONDO:0035945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"B-lymphoblastic leukemia/lymphoma with recurrent genetic abnormality","termid":"MONDO:0035605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with t(5;14)(q31.1;q32.3)","secondary_identifiers":["GARD:22347","Orphanet:585948","UMLS:C2698316","MEDGEN:396325","NCIT:C80340"],"synonyms":[{"name":"B lymphoblastic leukaemia lymphoma with t(5;14)(q31;q32); IL3-IGH","type":"exact"},{"name":"B lymphoblastic leukemia lymphoma with t(5;14)(q31;q32); IL3-IGH","type":"exact"}],"termid":"MONDO:0035945","xrefs":{"Monarch":{"xref_id":"0035945"}}}


id: PBO:0068591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 42, pseudogene","termid":"PBO:0068591"}


id: GO:0042064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cell adhesion receptor regulator activity (obsolete GO:0042064)","synonyms":[{"name":"cell adhesion receptor regulator activity","type":"exact"}],"termid":"GO:0042064"}


id: PBO:0057261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 487a","termid":"PBO:0057261"}


id: GO:0034403
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Recognition of both the 5' and 3'-splice sites and positioning them in the correct alignment with respect to each other so that the second catalytic step of nuclear mRNA splicing can occur.","definition_xrefs":["PMID:9430647","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA 3'-splice site recognition","termid":"GO:0000389"},{"relation_name":"is_a","term_name":"mRNA 5'-splice site recognition","termid":"GO:0000395"},{"relation_name":"part_of","term_name":"generation of catalytic spliceosome for second transesterification step","termid":"GO:0000350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0065003","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"alignment of 3' and 5' splice sites of mRNA","synonyms":[{"name":"alignment of 3' and 5' splice sites of nuclear mRNA","type":"exact"}],"termid":"GO:0034403"}


id: GO:0045545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to syndecan, an integral membrane proteoglycan (250-300 kDa) associated largely with epithelial cells.","definition_xrefs":["PMID:9355727","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan binding","termid":"GO:0043394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"syndecan binding","termid":"GO:0045545"}


id: PBO:0117167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CERS2 antisense RNA 1","termid":"PBO:0117167"}


id: GO:0052616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + NADPH + ent-kaur-16-en-19-ol + oxygen = 2 H2O + NADP+ + ent-kaur-16-en-19-al.","definition_xrefs":["MetaCyc:RXN-5242"],"gene_count":0,"genotype_count":0,"name":"obsolete ent-kaur-16-en-19-ol oxidase activity (obsolete GO:0052616)","termid":"GO:0052616"}


id: PBO:0002681
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human CDC14","termid":"PBO:0002681"}


id: MONDO:0005790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute inflammation of the liver caused by the hepatitis A virus. It is highly contagious and usually contracted through close contact with an infected individual or their feces, contaminated food or water.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hepatitis A virus infection","secondary_identifiers":["UMLS:C0019159","EFO:0007305","DOID:12549","MESH:D006506","NCIT:C3096","MEDGEN:42418","SCTID:40468003"],"synonyms":[{"name":"Hepatitis A","type":"exact"},{"name":"Hepatitis A infection","type":"exact"},{"name":"hepatitis type A","type":"exact"},{"name":"viral hepatitis A","type":"related"},{"name":"viral hepatitis, type A","type":"exact"}],"termid":"MONDO:0005790","xrefs":{"Monarch":{"xref_id":"0005790"}}}


id: MONDO:0029142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"hearing loss, autosomal recessive 111","secondary_identifiers":["OMIM:618145","DOID:0111640","GARD:22659","UMLS:C4748374","MEDGEN:1648423"],"synonyms":[{"name":"DFNB111","type":"narrow"},{"name":"deafness, autosomal recessive 111","type":"narrow"}],"termid":"MONDO:0029142","xrefs":{"Monarch":{"xref_id":"0029142"}}}


id: MONDO:0019335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mild hyperphenylalaninemia (HPA) is a rare form of phenylketonuria, an inborn error of amino acid metabolism, characterized by mild symptoms of HPA.","definition_xrefs":["Orphanet:79651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylketonuria","termid":"MONDO:0009861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"mild hyperphenylalaninemia","secondary_identifiers":["GARD:19027","MEDGEN:1843033","UMLS:C5680207"],"synonyms":[{"name":"mHPA","type":"exact"},{"name":"mild HPA","type":"exact"},{"name":"non-PKU HPA","type":"exact"}],"termid":"MONDO:0019335","xrefs":{"Monarch":{"xref_id":"0019335"}}}


id: GO:0052583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction in which a halogen in the donor substance acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on halogen in donors (obsolete GO:0052583)","termid":"GO:0052583"}


id: MOD:01298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct of an L-cysteine residue with 4-hydroxynonenal artificially reduced by a reagent such as NaBH4.","definition_xrefs":["PubMed:15133838","PubMed:11910026","Unimod:335#C"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cysteine 4-hydroxynonenal adduct","termid":"MOD:01237"},{"relation_name":"is_a","term_name":"reduced 4-hydroxynonenal adduct","termid":"MOD:00642"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"},{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:01155","MOD:00905"],"is_obsolete":false,"name":"reduced cysteine 4-hydroxynonenal adduct","synonyms":[{"name":"HNE+Delta:H(2)","type":"related"},{"name":"reduced 4-Hydroxynonenal","type":"related"}],"termid":"MOD:01298"}


id: GO:0008436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete heterogeneous nuclear ribonucleoprotein (obsolete GO:0008436)","synonyms":[{"name":"heterogeneous nuclear ribonucleoprotein","type":"exact"},{"name":"hnRNP","type":"exact"}],"termid":"GO:0008436"}


id: PBO:0027643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_alpha-galactosidase_activity","termid":"PBO:0027643"}


id: PBO:0066832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 131","termid":"PBO:0066832"}


id: GO:1903434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of constitutive secretory pathway.","definition_xrefs":["PMID:22899725","GO_REF:0000058","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of exocytosis","termid":"GO:0045920"},{"relation_name":"is_a","term_name":"regulation of constitutive secretory pathway","termid":"GO:1903433"},{"relation_name":"negatively_regulates","term_name":"constitutive secretory pathway","termid":"GO:0045054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810"],"is_obsolete":false,"name":"negative regulation of constitutive secretory pathway","synonyms":[{"name":"down regulation of constitutive secretory pathway","type":"exact"},{"name":"down-regulation of constitutive secretory pathway","type":"exact"},{"name":"downregulation of constitutive secretory pathway","type":"exact"},{"name":"inhibition of constitutive secretory pathway","type":"narrow"}],"termid":"GO:1903434"}


id: PBO:0110350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMPK1 pseudogene 2","termid":"PBO:0110350"}


id: PBO:0071753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P1","termid":"PBO:0071753"}


id: MONDO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the immune organ.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immune system organ benign neoplasm","secondary_identifiers":["DOID:0060092"],"synonyms":[{"name":"immune organ benign neoplasm","type":"exact"}],"termid":"MONDO:0000630","xrefs":{"Monarch":{"xref_id":"0000630"}}}


id: MONDO:0003236
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenomyoma characterized by the presence of marked glandular architectural complexity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenomyoma","termid":"MONDO:0005635"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical polypoid adenomyoma","secondary_identifiers":["DOID:4993","UMLS:C1300347","NCIT:C6895","MEDGEN:266248"],"synonyms":[{"name":"atypical polypoid adenomyoma","type":"exact"},{"name":"atypical polypoid adenomyoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003236","xrefs":{"Monarch":{"xref_id":"0003236"}}}


id: PBO:0052737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 29","termid":"PBO:0052737"}


id: PBO:0011978
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orthologous to S. cerevisiae YFL046W","termid":"PBO:0011978"}


id: PATO:0001472
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A depth which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"depth","termid":"PATO:0001595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased depth","secondary_identifiers":["PATO:0001692"],"synonyms":[{"name":"low depth","type":"exact"},{"name":"shallow","type":"exact"}],"termid":"PATO:0001472"}


id: GO:1903575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a cornified envelope.","definition_xrefs":["PMID:22226963","GO_REF:0000079","PMID:24794495","GOC:pm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"},{"relation_name":"is_a","term_name":"membrane assembly","termid":"GO:0071709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0044085"],"is_obsolete":false,"name":"cornified envelope assembly","synonyms":[{"name":"cornified envelope formation","type":"exact"}],"termid":"GO:1903575"}


id: MONDO:0009030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cranial nerves, recurrent paresis of","secondary_identifiers":["MEDGEN:387846","UMLS:C1857530","OMIM:218200","MESH:C565672"],"synonyms":[{"name":"cranial nerves, recurrent paresis of","type":"exact"}],"termid":"MONDO:0009030","xrefs":{"Monarch":{"xref_id":"0009030"}}}


id: GO:0033811
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaroyl-CoA + a flavonol 3-O-[beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside] = CoA + a flavonol 3-O-[6-(4-coumaroyl)-beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside].","definition_xrefs":["EC:2.3.1.173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"flavonol-3-O-triglucoside O-coumaroyltransferase activity","secondary_identifiers":["MetaCyc:2.3.1.173-RXN","RHEA:22160"],"synonyms":[{"name":"4-coumaroyl-CoA:flavonol-3-O-[beta-D-glucosyl-(1->2)-beta-D-glucosyl-(1->2)-beta-D-glucoside] 6'''-O-4-coumaroyltransferase activity","type":"related"}],"termid":"GO:0033811"}


id: MONDO:0005842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic inflammatory process affecting the mucous membrane of the maxillary sinus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sinusitis","termid":"MONDO:0005961"},{"relation_name":"is_a","term_name":"mouth disorder","termid":"MONDO:0006858"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxillary sinusitis","secondary_identifiers":["DOID:2051","MESH:D015523","MEDGEN:44313","NCIT:C34809","SCTID:88348008","UMLS:C0024959","EFO:0007361"],"termid":"MONDO:0005842","xrefs":{"Monarch":{"xref_id":"0005842"}}}


id: GO:0009910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of flower development.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of flower development","termid":"GO:0009909"},{"relation_name":"is_a","term_name":"negative regulation of post-embryonic development","termid":"GO:0048581"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"flower development","termid":"GO:0009908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of flower development","synonyms":[{"name":"down regulation of flower development","type":"exact"},{"name":"down-regulation of flower development","type":"exact"},{"name":"downregulation of flower development","type":"exact"},{"name":"inhibition of flower development","type":"narrow"}],"termid":"GO:0009910"}


id: GO:0009755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of a hormone.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"},{"relation_name":"part_of","term_name":"cellular response to hormone stimulus","termid":"GO:0032870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"hormone-mediated signaling pathway","synonyms":[{"name":"hormone mediated signalling","type":"exact"}],"termid":"GO:0009755"}


id: PBO:0054107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1472","termid":"PBO:0054107"}


id: PR:Q9P7M6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAP27G11.12 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7M6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hid-1 family protein P27G11.12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP27G11.12","synonyms":[{"name":"Down-regulated in multiple cancers 1 homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAP27G11.12","type":"exact"}],"termid":"PR:Q9P7M6"}


id: PBO:0071981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 10","termid":"PBO:0071981"}


id: GO:0035708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The switching of activated B cells from IgM biosynthesis to IgE biosynthesis, accomplished through a recombination process involving an intrachromosomal deletion between switch regions that reside 5' of the IgM and IgE constant region gene segments in the immunoglobulin heavy chain locus, that is dependent on the activity of interleukin 4 (IL-4).","definition_xrefs":["PMID:12496423","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotype switching to IgE isotypes","termid":"GO:0048289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0010467"],"is_obsolete":false,"name":"interleukin-4-dependent isotype switching to IgE isotypes","synonyms":[{"name":"IL-4-dependent isotype switching to IgE isotypes","type":"exact"}],"termid":"GO:0035708"}


id: PBO:0005824
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5.1.1.1","termid":"PBO:0005824"}


id: PBO:0058998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malonyl-CoA decarboxylase","termid":"PBO:0058998"}


id: GO:1900031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any regulation of transcription from RNA polymerase II promoter that is involved in calcium-mediated signaling.","definition_xrefs":["GOC:TermGenie","PMID:9407035","PMID:9407036"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter involved in calcium-mediated signaling (obsolete GO:1900031)","synonyms":[{"name":"global transcription regulation from Pol II promoter of calcium ion signaling","type":"related"},{"name":"global transcription regulation from Pol II promoter of calcium signaling","type":"related"},{"name":"global transcription regulation from Pol II promoter of calcium signalling","type":"related"},{"name":"global transcription regulation from Pol II promoter of calcium-mediated signaling","type":"related"},{"name":"global transcription regulation from Pol II promoter of calcium-mediated signalling","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"regulation of global transcription from Pol II promoter of calcium ion signaling","type":"related"},{"name":"regulation of global transcription from Pol II promoter of calcium signaling","type":"related"},{"name":"regulation of global transcription from Pol II promoter of calcium signalling","type":"related"},{"name":"regulation of global transcription from Pol II promoter of calcium-mediated signaling","type":"related"},{"name":"regulation of global transcription from Pol II promoter of calcium-mediated signalling","type":"related"},{"name":"regulation of transcription from Pol II promoter of calcium ion signaling","type":"exact"},{"name":"regulation of transcription from Pol II promoter of calcium signaling","type":"exact"},{"name":"regulation of transcription from Pol II promoter of calcium signalling","type":"exact"},{"name":"regulation of transcription from Pol II promoter of calcium-mediated signaling","type":"related"},{"name":"regulation of transcription from Pol II promoter of calcium-mediated signalling","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in calcium-mediated signaling","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter of calcium ion signaling","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter of calcium signaling","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter of calcium signalling","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter of calcium-mediated signaling","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter of calcium-mediated signalling","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of calcium ion signaling","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of calcium signaling","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of calcium signalling","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of calcium-mediated signaling","type":"related"},{"name":"regulation of transcription from RNA polymerase II promoter, global of calcium-mediated signalling","type":"related"}],"termid":"GO:1900031"}


id: PBO:0063144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate and testis expressed 4","termid":"PBO:0063144"}


id: GO:0035355
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex containing Toll-like receptor 2 (TLR2) and Toll-like receptor 6 (TLR6).","definition_xrefs":["GOC:add","PMID:21481769","PMID:19931471","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Toll-like receptor 2-Toll-like receptor 6 protein complex","secondary_identifiers":["GO:0038126"],"synonyms":[{"name":"TLR2-TLR6 protein complex","type":"exact"},{"name":"TLR2:TLR6 heterodimer","type":"exact"},{"name":"TLR6:TLR2 complex","type":"exact"},{"name":"toll-like receptor TLR6:TLR2 heterodimeric complex","type":"exact"}],"termid":"GO:0035355"}


id: GO:1900582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving o-orsellinic acid.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"o-orsellinic acid metabolic process","synonyms":[{"name":"o-orsellinic acid metabolism","type":"exact"}],"termid":"GO:1900582"}


id: PBO:0052763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 55","termid":"PBO:0052763"}


id: PBO:0061608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear casein kinase and cyclin dependent kinase substrate 1 pseudogene 1","termid":"PBO:0061608"}


id: PBO:0086978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the type 1 protein phosphatase (PP1) Glc7p; whether it functions as a positive or negative regulator of Glc7p is controversial; involved in the regulation of Glc7p nuclear localization and function","termid":"PBO:0086978"}


id: PBO:0091051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium ion import channel Cch1","termid":"PBO:0091051"}


id: PBO:0059864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 1","termid":"PBO:0059864"}


id: MONDO:0007587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"external auditory canal atresia-vertical talus-hypertelorism syndrome","secondary_identifiers":["UMLS:C1876181","GARD:4638","MEDGEN:361813","OMIM:133705","Orphanet:3023"],"synonyms":[{"name":"Rasmussen Johnsen Thomsen syndrome","type":"related"},{"name":"Rasmussen syndrome","type":"related"},{"name":"Rasmussen-Johnsen-Thomsen syndrome","type":"exact"},{"name":"external auditory canal, bilateral atresia of, with congenital vertical talus","type":"related"},{"name":"inherited congenital bilateral atresia of the external auditory canal, congenital bilateral vertical talus and increased interocular distance","type":"related"}],"termid":"MONDO:0007587","xrefs":{"Monarch":{"xref_id":"0007587"}}}


id: GO:0006016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 2-deoxyribose 1-phosphate, the phosphorylated sugar 1-phospho-2-deoxyribose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-deoxyribose 1-phosphate metabolic process","termid":"GO:0046384"},{"relation_name":"is_a","term_name":"deoxyribose phosphate biosynthetic process","termid":"GO:0046385"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-deoxyribose 1-phosphate biosynthetic process","synonyms":[{"name":"2-deoxyribose 1-phosphate anabolism","type":"exact"},{"name":"2-deoxyribose 1-phosphate biosynthesis","type":"exact"},{"name":"2-deoxyribose 1-phosphate formation","type":"exact"},{"name":"2-deoxyribose 1-phosphate synthesis","type":"exact"}],"termid":"GO:0006016"}


id: MONDO:0010867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PARC syndrome is a rare genetic developmental defect during embryogenesis syndrome characterized by the association of congenital poikiloderma (P), generalized alopecia (A), retrognathism (R) and cleft palate (C). There have been no further descriptions in the literature since 1990.","definition_xrefs":["Orphanet:2825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARC syndrome","secondary_identifiers":["OMIM:600331","MEDGEN:373923","UMLS:C1838256","MESH:C537174","GARD:4223"],"synonyms":[{"name":"PARC syndrome","type":"exact"},{"name":"poikiloderma, alopecia, retrognathism, and cleft palate","type":"related"},{"name":"poikiloderma-alopecia-retrognathism-cleft palate syndrome","type":"exact"}],"termid":"MONDO:0010867","xrefs":{"Monarch":{"xref_id":"0010867"}}}


id: PR:P87152
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spt7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P87152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional activator spt7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25H2.11c","synonyms":[{"name":"Spom972h-spt7","type":"exact"}],"termid":"PR:P87152"}


id: MONDO:0021311
data:
  {"annotated_genes":["SJAG_01151"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012004"}]},"cv_name":"mondo","definition":"A cancer that involves the parathyroid gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"},{"relation_name":"is_a","term_name":"tumor of parathyroid gland","termid":"MONDO:0021360"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01151":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant tumor of parathyroid gland","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0153653","NCIT:C9322","SCTID:363481002","MEDGEN:102283","ICD9:194.1","ICD10CM:C75.0","ONCOTREE:PTH"],"synonyms":[{"name":"cancer of parathyroid gland","type":"exact"},{"name":"malignant neoplasm of parathyroid","type":"exact"},{"name":"malignant neoplasm of parathyroid gland","type":"exact"},{"name":"malignant neoplasm of the parathyroid","type":"exact"},{"name":"malignant neoplasm of the parathyroid gland","type":"exact"},{"name":"malignant parathyroid gland neoplasm","type":"exact"},{"name":"malignant parathyroid gland tumor","type":"exact"},{"name":"malignant parathyroid gland tumour","type":"exact"},{"name":"malignant parathyroid neoplasm","type":"exact"},{"name":"malignant parathyroid tumor","type":"exact"},{"name":"malignant parathyroid tumour","type":"exact"},{"name":"malignant tumor of parathyroid","type":"exact"},{"name":"malignant tumor of the parathyroid","type":"exact"},{"name":"malignant tumor of the parathyroid gland","type":"exact"},{"name":"malignant tumour of parathyroid","type":"exact"},{"name":"malignant tumour of the parathyroid","type":"exact"},{"name":"malignant tumour of the parathyroid gland","type":"exact"},{"name":"parathyroid cancer","type":"exact"},{"name":"parathyroid gland cancer","type":"exact"}],"termid":"MONDO:0021311","terms_by_termid":{"MONDO:0012004":null},"xrefs":{"Monarch":{"xref_id":"0021311"}}}


id: GO:0102422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: curcumin 4'-O-beta-D-gentiotrioside + UDP-alpha-D-glucose = curcumin 4'-O-beta-D-gentiotetraside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete curcumin-4'-O-beta-D-gentiotrioside 1,6-glucosyltransferase activity (obsolete GO:0102422)","termid":"GO:0102422"}


id: FYPO:0004140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glutathione (GSH) measured in a cell that is subject to nitrogen starvation is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell","termid":"FYPO:0000990"},{"relation_name":"is_a","term_name":"altered level of substance in cell during nitrogen starvation","termid":"FYPO:0004139"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular glutathione level during nitrogen starvation","synonyms":[{"name":"increased cellular GSH level during nitrogen starvation","type":"exact"},{"name":"increased cellular L-gamma-glutamyl-L-cysteinylglycine level during nitrogen starvation","type":"exact"},{"name":"increased cellular glutathione level during nitrogen depletion","type":"exact"},{"name":"increased cellular glutathione level during nitrogen deprivation","type":"exact"},{"name":"increased cellular reduced glutathione level during nitrogen starvation","type":"exact"},{"name":"increased glutathione accumulation during nitrogen starvation","type":"related"}],"termid":"FYPO:0004140"}


id: GO:0048168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that modulates neuronal synaptic plasticity, the ability of neuronal synapses to change as circumstances require. They may alter function, such as increasing or decreasing their sensitivity, or they may increase or decrease in actual numbers.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of neuronal synaptic plasticity","termid":"GO:0048168"}


id: MONDO:0013860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic membranous glomerulonephritis (IMG) is a primary glomerular disease characterized by proteinuria, usually in the nephrotic range, with preserved renal function.","definition_xrefs":["Orphanet:97560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"},{"relation_name":"is_a","term_name":"membranous glomerulonephritis","termid":"MONDO:0005376"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"idiopathic membranous glomerulonephritis","secondary_identifiers":["MEDGEN:39226","NCIT:C123060","OMIM:614692","GARD:9180","UMLS:C0086445","SCTID:722119002"],"synonyms":[{"name":"Extramembranous glomerulonephritis","type":"related"},{"name":"Idiopathic membranous glomerulopathy","type":"related"},{"name":"MBNP","type":"related"},{"name":"MGN","type":"related"},{"name":"glomerulonephritis, membranous","type":"related"},{"name":"idiopathic membranous nephropathy","type":"related"},{"name":"membranous GN","type":"related"},{"name":"membranous nephropathy - Idiopathic","type":"exact"},{"name":"membranous nephropathy, susceptibility to","type":"related"}],"termid":"MONDO:0013860","xrefs":{"Monarch":{"xref_id":"0013860"}}}


id: PR:Q9Y7T7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent RNA helicase DDX23 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing ATP-dependent RNA helicase prp28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.11","secondary_identifiers":["UniProtKB:Q9Y7T7"],"synonyms":[{"name":"Spom972h-DDX23","type":"exact"}],"termid":"PR:Q9Y7T7"}


id: PR:O94235
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A RAF proto-oncogene serine/threonine-protein kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02427"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase mph1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.01","secondary_identifiers":["UniProtKB:O94235"],"synonyms":[{"name":"Spom972h-RAF1","type":"exact"}],"termid":"PR:O94235"}


id: PBO:0080734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WWOX antisense RNA 1","termid":"PBO:0080734"}


id: MONDO:0004337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paget disease involving the perianal skin.","definition_xrefs":["NCIT:C7476"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anal Paget disease","termid":"MONDO:0002651"},{"relation_name":"is_a","term_name":"cutaneous Paget disease","termid":"MONDO:0002655"},{"relation_name":"is_a","term_name":"anal margin carcinoma","termid":"MONDO:0002941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"perianal skin Paget disease","secondary_identifiers":["UMLS:C1332270","DOID:7708","MEDGEN:231372"],"synonyms":[{"name":"Paget disease of the anal margin","type":"exact"},{"name":"Paget's disease of the anal margin","type":"exact"},{"name":"anal margin Paget's disease","type":"exact"},{"name":"perianal skin Paget disease","type":"exact"},{"name":"perianal skin Paget's disease","type":"exact"},{"name":"perianal skin mammary Paget's disease","type":"exact"}],"termid":"MONDO:0004337","xrefs":{"Monarch":{"xref_id":"0004337"}}}


id: PBO:0058031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4252","termid":"PBO:0058031"}


id: PBO:0044590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developing brain homeobox 1","termid":"PBO:0044590"}


id: GO:2000055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Wnt signaling pathway involved in dorsal/ventral axis specification.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Wnt signaling pathway involved in dorsal/ventral axis specification (obsolete GO:2000055)","synonyms":[{"name":"positive regulation of Wnt receptor signaling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt receptor signalling pathway involved in dorsal/ventral axis specification","type":"exact"},{"name":"positive regulation of Wnt-activated signaling pathway involved in dorsal/ventral axis specification","type":"exact"}],"termid":"GO:2000055"}


id: PBO:0005561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transporter (predicted)","termid":"PBO:0005561"}


id: GO:0007195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by dopamine binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:dph","GOC:mah","GOC:signaling","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled dopamine receptor signaling pathway","termid":"GO:0007212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting dopamine receptor signaling pathway","synonyms":[{"name":"dopamine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"dopamine receptor, adenylyl cyclase inhibiting pathway","type":"exact"},{"name":"inhibition of adenylate cyclase activity by dopamine receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by dopamine receptor signalling pathway","type":"exact"}],"termid":"GO:0007195"}


id: PBO:0058337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4711","termid":"PBO:0058337"}


id: PBO:0053334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 174","termid":"PBO:0053334"}


id: GO:0051561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the concentration of calcium ions in mitochondria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial calcium ion homeostasis","termid":"GO:0051560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"positive regulation of mitochondrial calcium ion concentration","synonyms":[{"name":"elevation of calcium ion concentration in mitochondria","type":"exact"},{"name":"elevation of calcium ion concentration in mitochondrion","type":"exact"},{"name":"elevation of mitochondrial calcium ion concentration","type":"exact"},{"name":"mitochondrial calcium ion concentration elevation","type":"exact"}],"termid":"GO:0051561"}


id: SO:0005847
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is a member of a gene cassette, which is a mobile genetic element.","direct_ancestors":[{"relation_name":"is_a","term_name":"gene_cassette_member","termid":"SO:0005848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cassette_array_member","synonyms":[{"name":"cassette array member","type":"exact"}],"termid":"SO:0005847"}


id: PBO:0082961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic protein of unknown function; computational analysis of large-scale protein-protein interaction data suggests a possible role in actin patch assembly","termid":"PBO:0082961"}


id: PBO:0087182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit A34.5; essential for nucleolar assembly and for high polymerase loading rate; nucleolar localization depends on Rpa49p","termid":"PBO:0087182"}


id: PBO:0048858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GOLGA2 pseudogene 3 Y-linked","termid":"PBO:0048858"}


id: PBO:0087051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24A; not essential for translation but may be required for normal translation rate; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24A has a paralog, RPL24B, that arose from the whole genome duplication","termid":"PBO:0087051"}


id: GO:1903706
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hemopoiesis.","definition_xrefs":["GOC:PARL","GO_REF:0000058","GOC:TermGenie","GOC:pad","PMID:20080761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immune system process","termid":"GO:0002682"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hemopoiesis","synonyms":[{"name":"regulation of blood cell biosynthesis","type":"exact"},{"name":"regulation of blood cell formation","type":"exact"},{"name":"regulation of haemopoiesis","type":"exact"},{"name":"regulation of hematopoiesis","type":"exact"}],"termid":"GO:1903706"}


id: MONDO:0011799
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive nonsyndromic deafness that has material basis in variation in the chromosome region 10p11.23-q21.1.","definition_xrefs":["PMID:12080392","DOID:0110492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019497"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 33","secondary_identifiers":["GARD:22604","MEDGEN:335464","OMIM:607239","UMLS:C1846576","MESH:C564602"],"synonyms":[{"name":"DFNB33","type":"narrow"},{"name":"autosomal recessive deafness 33","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 33","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 33","type":"narrow"},{"name":"deafness, autosomal recessive 33","type":"narrow"}],"termid":"MONDO:0011799","xrefs":{"Monarch":{"xref_id":"0011799"}}}


id: MONDO:0005439
data:
  {"annotated_genes":["SJAG_04785","SJAG_01072","SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88490,88488,88489],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011369"}]},"cv_name":"mondo","definition":"An inheritable form of hyperlipidemia, in which there are excess lipids in the blood.","definition_xrefs":["NCIT:C34704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperlipidemia","termid":"MONDO:0001336"},{"relation_name":"is_a","term_name":"hyperlipoproteinemia","termid":"MONDO:0037748"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01072":null,"SJAG_02432":null,"SJAG_04785":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"familial hypercholesterolemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0004911","MEDGEN:5688","DOID:13810","OMIMPS:143890","UMLS:C0020445","SCTID:190773008","ICD9:V19.8","ICD10CM:E78.01","NANDO:2200602"],"synonyms":[{"name":"Fredrickson type IIa hyperlipoproteinemia","type":"exact"},{"name":"Fredrickson type IIa lipidaemia","type":"exact"},{"name":"familial hyperbetalipoproteinaemia","type":"exact"},{"name":"familial hypercholesteremia","type":"exact"},{"name":"hyperbetalipoproteinemia","type":"exact"},{"name":"hyperlipoproteinemia type II","type":"exact"},{"name":"type II hyperlipidemia","type":"related"}],"termid":"MONDO:0005439","terms_by_termid":{"MONDO:0011369":null},"xrefs":{"Monarch":{"xref_id":"0005439"}}}


id: MONDO:0100188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypoalphalipoproteinemia that is has its basis in the disruption of ApoA-I and ApoC-III.","definition_xrefs":["MONDO:patterns/inborn_metabolic_disrupts","PMID:20616715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia","termid":"MONDO:0017773"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"combined ApoA-I and ApoC-III deficiency","termid":"MONDO:0100188","xrefs":{"Monarch":{"xref_id":"0100188"}}}


id: PBO:0063980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 14","termid":"PBO:0063980"}


id: PBO:0085818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; expressed at both mRNA and protein levels; SWAT-GFP and mCherry fusion proteins localize to the vacuole","termid":"PBO:0085818"}


id: PATO:0000730
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000730 relative function value (obsolete PATO:0000730)","termid":"PATO:0000730"}


id: MONDO:0005610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disabling osteochondrodysplasia with osteosclerosis, cone-shaped metaphysis, and shortening of the diaphysis. It is endemic in parts of Siberia and northern China. Mineral deficiencies (e.g., selenium, iodine), fungal cereal contamination, and water contamination may be contributing factors in its etiology.","definition_xrefs":["MESH:D057767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Kashin-Beck disease","secondary_identifiers":["ICD9:716.08","icd11.foundation:211396970","MEDGEN:412531","ICD9:716.00","SCTID:270505009","EFO:0006511","ICD9:716.06","UMLS:C2745963"],"termid":"MONDO:0005610","xrefs":{"Monarch":{"xref_id":"0005610"}}}


id: FYPO:0006921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the frequency of gene conversion at replication fork barriers is decreased.","definition_xrefs":["PMID:31149897","PMID:28586299","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased gene conversion during vegetative growth","termid":"FYPO:0000185"},{"relation_name":"is_a","term_name":"decreased DNA recombination at mitotic DNA replication fork barriers","termid":"FYPO:0006920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001985","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased gene conversion at mitotic DNA replication fork barriers","synonyms":[{"name":"decreased gene conversion at mitotic DNA replication fork barriers during mitotic cell cycle","type":"related"},{"name":"decreased gene conversion at mitotic DNA replication fork barriers during vegetative growth","type":"exact"},{"name":"reduced gene conversion at mitotic DNA replication fork barriers","type":"exact"}],"termid":"FYPO:0006921"}


id: GO:0021674
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 8 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:curators","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 8 development","termid":"GO:0021574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 8 morphogenesis","termid":"GO:0021674"}


id: PBO:0042927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 7","termid":"PBO:0042927"}


id: GO:0031882
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 5 somatostatin receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatostatin receptor binding","termid":"GO:0031877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"type 5 somatostatin receptor binding","synonyms":[{"name":"type 5 somatostatin receptor ligand","type":"narrow"}],"termid":"GO:0031882"}


id: PBO:0036356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-Not complex NOT box subunit Not3/5","termid":"PBO:0036356"}


id: PBO:0065209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 40 homolog A","termid":"PBO:0065209"}


id: GO:1900293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of galactotriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of galactotriose transport","termid":"GO:1900291"},{"relation_name":"positively_regulates","term_name":"galactotriose transport","termid":"GO:2001093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of galactotriose transport","synonyms":[{"name":"activation of galactotriose transport","type":"narrow"},{"name":"up regulation of galactotriose transport","type":"exact"},{"name":"up-regulation of galactotriose transport","type":"exact"},{"name":"upregulation of galactotriose transport","type":"exact"}],"termid":"GO:1900293"}


id: MOD:01771
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The farnesyl cation protein modification reporter fragment produced by fragmentation of some farnesyl modified residues.","definition_xrefs":["PubMed:15609361","PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"farnesylated residue","termid":"MOD:00437"},{"relation_name":"is_a","term_name":"modification reporter fragment","termid":"MOD:01520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyl reporter fragment","synonyms":[{"name":"(2E,6E)-3,7,11-trimethyldodeca-2,6,10-trien-1-ylium","type":"exact"},{"name":"Farn+","type":"exact"},{"name":"farnesyl cation","type":"exact"}],"termid":"MOD:01771"}


id: PBO:0029221
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_malate_dehydrogenase_(decarboxylating)_(NAD+)_activity","termid":"PBO:0029221"}


id: PBO:0069205
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 460, pseudogene","termid":"PBO:0069205"}


id: GO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the directed movement of catecholamine neurotransmitters into a neuron or glial cell.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter uptake","termid":"GO:0051582"},{"relation_name":"is_a","term_name":"regulation of catecholamine uptake involved in synaptic transmission","termid":"GO:0051940"},{"relation_name":"is_a","term_name":"positive regulation of amine transport","termid":"GO:0051954"},{"relation_name":"positively_regulates","term_name":"catecholamine uptake involved in synaptic transmission","termid":"GO:0051934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"activation of catecholamine uptake during transmission of nerve impulse","type":"narrow"},{"name":"positive regulation of catecholamine neurotransmitter reuptake","type":"exact"},{"name":"positive regulation of catecholamine neurotransmitter uptake","type":"exact"},{"name":"positive regulation of catecholamine uptake during transmission of nerve impulse","type":"broad"},{"name":"stimulation of catecholamine uptake during transmission of nerve impulse","type":"narrow"},{"name":"up regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"up-regulation of catecholamine uptake during transmission of nerve impulse","type":"exact"},{"name":"upregulation of catecholamine uptake during transmission of nerve impulse","type":"exact"}],"termid":"GO:0051944"}


id: GO:0050908
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in visual perception in which a light stimulus is received and converted into a molecular signal.","definition_xrefs":["GOC:dos","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of light stimulus involved in sensory perception","termid":"GO:0050962"},{"relation_name":"part_of","term_name":"visual perception","termid":"GO:0007601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of light stimulus involved in visual perception","synonyms":[{"name":"sensory detection of light during visual perception","type":"exact"},{"name":"sensory detection of light stimulus during visual perception","type":"exact"},{"name":"sensory transduction of light during visual perception","type":"exact"},{"name":"sensory transduction of light stimulus during visual perception","type":"exact"},{"name":"visual perception, detection of light stimulus","type":"exact"},{"name":"visual perception, sensory transduction during perception of light","type":"exact"},{"name":"visual perception, sensory transduction of light stimulus","type":"exact"}],"termid":"GO:0050908"}


id: FYECO:0000455
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which leucine was completely excluded from the experimental medium/buffer..","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine absent","termid":"FYECO:0000455"}


id: MONDO:0044640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 2T","secondary_identifiers":["Orphanet:495274","GARD:17909"],"synonyms":[{"name":"AR-CMT2T","type":"exact"},{"name":"CMT2T","type":"exact"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2T","type":"exact"}],"termid":"MONDO:0044640","xrefs":{"Monarch":{"xref_id":"0044640"}}}


id: GO:0140692
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an omega-methyl-very-long-chain fatty acid + O2 + reduced [NADPH-hemoprotein reductase] = an omega-hydroxy-very-long-chain fatty acid + H+ + H2O + oxidized [NADPH-hemoprotein reductase]. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["PMID:16547005","RHEA:67952"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid omega-hydroxylase activity","termid":"GO:0120250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"very long-chain fatty acid omega-hydroxylase activity","termid":"GO:0140692"}


id: PBO:0029556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_polynucleotide_3'-phosphatase_activity","termid":"PBO:0029556"}


id: PBO:0083949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gamma subunit of the oligosaccharyltransferase complex of the ER lumen; complex catalyzes asparagine-linked glycosylation of newly synthesized proteins; Ost3p is important for N-glycosylation of a subset of proteins including modification of Pmt2p at N131 and N403","termid":"PBO:0083949"}


id: MONDO:0011291
data:
  {"annotated_genes":["SJAG_03656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87212],"is_not":false,"summary":null,"term":"MONDO:0011291"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by feeding problems, mild-to-moderate neurologic involvement with hypotonia, poor head control, developmental delay, ataxia, strabismus, and seizures, ranging from febrile convulsions to epilepsy. Retinal degeneration has also been reported. A minority of patients show other manifestations, particularly intestinal (such as protein-losing enteropathy) and liver involvement. The disease is caused by loss of function mutations of the gene ALG6 (1p31.3).","definition_xrefs":["Orphanet:79320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"ALG6-congenital disorder of glycosylation 1C","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2930997","GARD:9829","MESH:C535741","DOID:0080555","MEDGEN:443952","NCIT:C126869","SCTID:709412006","OMIM:603147"],"synonyms":[{"name":"ALG6 congenital disorder of glycosylation","type":"exact"},{"name":"ALG6-CDG","type":"related"},{"name":"ALG6-CDG (CDG-Ic)","type":"exact"},{"name":"ALG6-CDG1C","type":"exact"},{"name":"ALG6-congenital disorder of glycosylation 1C","type":"exact"},{"name":"CDG 1C","type":"related"},{"name":"CDG Ic","type":"related"},{"name":"CDG syndrome type Ic","type":"exact"},{"name":"CDG-Ic","type":"exact"},{"name":"CDG1C","type":"exact"},{"name":"CDGIc","type":"exact"},{"name":"CDGS5 (formerly)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Ic","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1C","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type 1 with deficient glycosylation of dolichol-linked oligosaccharide (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type I, with deficient glycosylation of dolichol-linked oligosaccharide","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type I, with deficient glycosylation of dolichol-linked oligosaccharide, formerly","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type V","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type V (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type V, formerly","type":"related"},{"name":"congenital disorder of glycosylation caused by mutation in ALG6","type":"exact"},{"name":"congenital disorder of glycosylation type 1C","type":"exact"},{"name":"congenital disorder of glycosylation type Ic","type":"exact"},{"name":"congenital disorder of glycosylation, type Ic","type":"related"},{"name":"glucosyltransferase 1 deficiency","type":"exact"}],"termid":"MONDO:0011291","terms_by_termid":{"MONDO:0011291":null},"xrefs":{"Monarch":{"xref_id":"0011291"}}}


id: PBO:0066828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 127","termid":"PBO:0066828"}


id: PBO:0034355
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increases_expression_of","termid":"PBO:0034355"}


id: _global:results_in_commitment_to
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"p 'results in commitment to' c if and only if p is a developmental process and c is a cell and p results in the state of c changing such that is can only develop into a single cell type.","direct_ancestors":[{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_commitment_to","secondary_identifiers":["RO:0002348","GOREL:0001017"],"termid":"_global:results_in_commitment_to"}


id: GO:0102612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 9beta-pimara-7,15-diene + NADPH + O2 + H+ = 6beta-hydroxy-syn-pimaradiene + NADP + H2O.","definition_xrefs":["GOC:pz","PMID:22215681"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"syn-pimaradiene 6beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-15452"],"termid":"GO:0102612"}


id: PBO:0109226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall alpha-1,3-glucan synthase Mok12","termid":"PBO:0109226"}


id: GO:0061297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the mesonephros.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesonephros development","termid":"GO:0061213"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:0061295"},{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072041"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell maintenance involved in mesonephric nephron morphogenesis","termid":"GO:0061235"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","termid":"GO:1901146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process involved in mesonephric nephron morphogenesis","synonyms":[{"name":"positive regulation of mesenchymal stem cell apoptosis involved in mesonephric nephron morphogenesis","type":"narrow"},{"name":"positive regulation of mesenchymal stem cell apoptotic process involved in mesonephric nephron morphogenesis","type":"exact"}],"termid":"GO:0061297"}


id: PBO:0035723
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_glycosylation_during_vegetative_growth","termid":"PBO:0035723"}


id: GO:0051420
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to nebulette, a 107 kDa protein associated with the I-Z-I complex of cardiac myofibrils. It shows a high degree of homology with skeletal muscle nebulin.","definition_xrefs":["PMID:11699871"],"gene_count":0,"genotype_count":0,"name":"obsolete nebulette binding (obsolete GO:0051420)","synonyms":[{"name":"nebulette binding","type":"exact"}],"termid":"GO:0051420"}


id: PBO:0054565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1967","termid":"PBO:0054565"}


id: FYPO:0005104
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of Lys63-specific deubiquitinase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ubiquitinyl hydrolase activity","termid":"FYPO:0003111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal Lys63-specific deubiquitinase activity","termid":"FYPO:0005104"}


id: PBO:0028832
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_homologous_chromosome_pairing_at_cis-acting_homologous_chromosome_pairing_region","termid":"PBO:0028832"}


id: PBO:0117076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PEA15 antisense RNA 1","termid":"PBO:0117076"}


id: MONDO:0008506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"symphalangism","termid":"MONDO:0000151"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism of toes","secondary_identifiers":["OMIM:185600","MESH:C566101","MEDGEN:396129","UMLS:C1861418"],"synonyms":[{"name":"symphalangism of toes","type":"exact"}],"termid":"MONDO:0008506","xrefs":{"Monarch":{"xref_id":"0008506"}}}


id: GO:0090454
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of glutamate into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glutamate transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"vacuolar glutamate import","type":"related"}],"termid":"GO:0090454","terms_by_termid":{"GO:0090515":null}}


id: PBO:0013125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Luc7","termid":"PBO:0013125"}


id: GO:1901894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an ATPase-coupled calcium transmembrane transporter activity.","definition_xrefs":["GOC:TermGenie","PMID:19708671","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"},{"relation_name":"is_a","term_name":"regulation of ATP-dependent activity","termid":"GO:0043462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of ATPase-coupled calcium transmembrane transporter activity","synonyms":[{"name":"regulation of ATP phosphohydrolase (Ca2+-transporting)","type":"exact"},{"name":"regulation of Ca(2+)-transporting ATPase activity","type":"exact"},{"name":"regulation of Ca2+-pumping ATPase activity","type":"exact"},{"name":"regulation of Ca2+-transporting ATPase activity","type":"exact"},{"name":"regulation of calcium ABC transporter","type":"narrow"},{"name":"regulation of calcium efflux ATPase","type":"narrow"},{"name":"regulation of calcium pump","type":"broad"},{"name":"regulation of calcium transporting ATPase activity","type":"exact"},{"name":"regulation of calcium-translocating P-type ATPase activity","type":"narrow"},{"name":"regulation of calcium-transporting ATPase activity","type":"exact"},{"name":"regulation of plasma membrane Ca-ATPase","type":"narrow"},{"name":"regulation of sarco(endo)plasmic reticulum Ca2+-ATPase","type":"narrow"},{"name":"regulation of sarcoplasmic reticulum ATPase","type":"narrow"}],"termid":"GO:1901894"}


id: MONDO:0015358
data:
  {"annotated_genes":["SJAG_00031","SJAG_01383","SJAG_00252"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88478],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011002"},{"annotations":[88957,88956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032792"}]},"cv_name":"mondo","definition":"A group of slowly progressive inherited disorders affecting motor and sensory peripheral nerves. Subtypes include HMSNs I-VII. HMSN I and II both refer to CHARCOT-MARIE-Tooth DISEASE. HMSN III refers to hypertrophic neuropathy of infancy. HMSN IV refers to REFSUM DISEASE. HMSN V refers to a condition marked by a hereditary motor and sensory neuropathy associated with spastic paraplegia (see SPASTIC PARAPLEGIA, HEREDITARY). HMSN VI refers to HMSN associated with an inherited optic atrophy (OPTIC ATROPHIES, HEREDITARY), and HMSN VII refers to HMSN associated with retinitis pigmentosa. (From Adams et al., Principles of Neurology, 6th ed, p1343)","definition_xrefs":["MESH:D015417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00252":null,"SJAG_01383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"hereditary motor and sensory neuropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:G60.0","GARD:12685","MEDGEN:45066","NANDO:2200855","icd11.foundation:1538134578","SCTID:398100001","Orphanet:140450","UMLS:C0027888"],"synonyms":[{"name":"HMSN","type":"exact"}],"termid":"MONDO:0015358","terms_by_termid":{"MONDO:0011002":null,"MONDO:0032792":null},"xrefs":{"Monarch":{"xref_id":"0015358"}}}


id: GO:0036450
data:
  {"annotated_genes":["SJAG_02370"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93686],"is_not":false,"summary":null,"term":"GO:0036450"}]},"cv_name":"biological_process","definition":"Cleavage of the 5'-cap of a nuclear-transcribed mRNA that has been modified by the enzymatic addition of a sequence of uridylyl residues (polyuridylation) at the 3' end.","definition_xrefs":["GOC:vw","PMID:19430462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:0031087"},{"relation_name":"part_of","term_name":"polyuridylation-dependent mRNA catabolic process","termid":"GO:1990074"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02370":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0016071"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"polyuridylation-dependent decapping of nuclear-transcribed mRNA","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"uridylation-dependent decapping of nuclear-transcribed mRNA","type":"broad"}],"termid":"GO:0036450","terms_by_termid":{"GO:0036450":null}}


id: MONDO:0023031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis acral with facial and genital abnormalities (obsolete MONDO:0023031)","termid":"MONDO:0023031","xrefs":{"Monarch":{"xref_id":"0023031"}}}


id: PBO:0063051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein associated with LIN7 2, MAGUK p55 family member","termid":"PBO:0063051"}


id: PBO:0050389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 13","termid":"PBO:0050389"}


id: MONDO:0003006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Bartter disease (obsolete MONDO:0003006)","termid":"MONDO:0003006","xrefs":{"Monarch":{"xref_id":"0003006"}}}


id: GO:1903814
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of collecting lymphatic vessel constriction.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:23897233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of anatomical structure size","termid":"GO:0090066"},{"relation_name":"regulates","term_name":"collecting lymphatic vessel constriction","termid":"GO:1990192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of collecting lymphatic vessel constriction","synonyms":[{"name":"regulation of lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1903814"}


id: GO:0140915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a zymogen granule.","definition_xrefs":["PMID:20133611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into secretory vesicle","termid":"GO:0140914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into zymogen granule","termid":"GO:0140915"}


id: MONDO:0013715
data:
  {"annotated_genes":["SJAG_03598"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87628],"is_not":false,"summary":null,"term":"MONDO:0013715"}]},"cv_name":"mondo","definition":"Any amyotrophic lateral sclerosis in which the cause of the disease is a mutation in the SIGMAR1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile amyotrophic lateral sclerosis","termid":"MONDO:0017593"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03598":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"amyotrophic lateral sclerosis type 16","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3280587","GARD:15794","DOID:0060207","MEDGEN:482217","OMIM:614373"],"synonyms":[{"name":"ALS16","type":"exact"},{"name":"SIGMAR1 amyotrophic lateral sclerosis","type":"exact"},{"name":"amyotrophic lateral sclerosis 16","type":"exact"},{"name":"amyotrophic lateral sclerosis 16, juvenile","type":"related"},{"name":"amyotrophic lateral sclerosis caused by mutation in SIGMAR1","type":"exact"}],"termid":"MONDO:0013715","terms_by_termid":{"MONDO:0013715":null},"xrefs":{"Monarch":{"xref_id":"0013715"}}}


id: PBO:0070455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 12","termid":"PBO:0070455"}


id: MONDO:0009670
data:
  {"annotated_genes":["SJAG_03847"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88163],"is_not":false,"summary":null,"term":"MONDO:0009670"}]},"cv_name":"mondo","definition":"Lethal congenital contracture syndrome type 1 is a rare, genetic arthrogryposis syndrome characterized by total fetal akinesia (detectable since the 13th week of gestation) accompanied by hydrops, micrognathia, pulmonary hypoplasia, pterygia and multiple joint contractures (usually flexion contractures in the elbows and extension in the knees), leading invariably to death before the 32nd week of gestation. Lack of anterior horn motoneurons, severe atrophy of the ventral spinal cord and severe skeletal muscle hypoplasia are characteristic neuropathological findings, with no evidence of other organ structural anomalies.","definition_xrefs":["Orphanet:1486"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic respiratory or mediastinal malformation (obsolete MONDO:0015221)","termid":"MONDO:0015221"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"lethal congenital contracture syndrome","termid":"MONDO:0017436"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03847":null},"genotype_count":0,"is_obsolete":false,"name":"lethal congenital contracture syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537194","DOID:0060559","GARD:3227","MEDGEN:344338","OMIM:253310","SCTID:715418007","UMLS:C1854664"],"synonyms":[{"name":"GLE1 lethal congenital contracture syndrome","type":"exact"},{"name":"Herva disease","type":"exact"},{"name":"LCCS1","type":"exact"},{"name":"Lccs","type":"related"},{"name":"lethal autosomal recessive syndrome of multiple congenital contractures","type":"related"},{"name":"lethal congenital contracture syndrome 1","type":"exact"},{"name":"lethal congenital contracture syndrome caused by mutation in GLE1","type":"exact"},{"name":"lethal congenital contracture syndrome type 1","type":"exact"},{"name":"multiple contracture syndrome, Finnish type","type":"exact"}],"termid":"MONDO:0009670","terms_by_termid":{"MONDO:0009670":null},"xrefs":{"Monarch":{"xref_id":"0009670"}}}


id: PBO:0001136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7-like Rlp7 involved in ribosome biogenesis (predicted)","termid":"PBO:0001136"}


id: PATO:0000498
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A duration quality of a process which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"duration","termid":"PATO:0001309"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased duration","secondary_identifiers":["PATO:0000715"],"synonyms":[{"name":"chronic","type":"related"},{"name":"high time","type":"exact"},{"name":"increased period","type":"exact"},{"name":"increased time","type":"exact"},{"name":"prolonged period","type":"related"},{"name":"slow time","type":"related"}],"termid":"PATO:0000498"}


id: GO:0160041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The receptor ligand activity of any polypeptide expressed in, and secreted from a neuron.","definition_xrefs":["PMID:18806786","PMID:21922398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0098772","GO:0140677","GO:0005515"],"is_obsolete":false,"name":"neuropeptide activity","termid":"GO:0160041"}


id: GO:0014061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the regulated release of norepinephrine.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catecholamine secretion","termid":"GO:0050433"},{"relation_name":"regulates","term_name":"norepinephrine secretion","termid":"GO:0048243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of norepinephrine secretion","synonyms":[{"name":"regulation of noradrenaline secretion","type":"exact"}],"termid":"GO:0014061"}


id: PBO:0078761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase subunit 11-2 pseudogene 4","termid":"PBO:0078761"}


id: MONDO:0011258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any branchiootic syndrome in which the cause of the disease is a mutation in the EYA1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branchiootic syndrome","termid":"MONDO:0018878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branchiootic syndrome 1","secondary_identifiers":["MEDGEN:351307","OMIM:602588","UMLS:C1865143"],"synonyms":[{"name":"BOS1","type":"related"},{"name":"EYA1 branchiootic syndrome","type":"exact"},{"name":"anterior segment anomalies with or without cataract","type":"related"},{"name":"bo syndrome 1","type":"related"},{"name":"branchiootic dysplasia","type":"related"},{"name":"branchiootic syndrome 1","type":"exact"},{"name":"branchiootic syndrome caused by mutation in EYA1","type":"exact"},{"name":"branchiootic syndrome type 1","type":"exact"}],"termid":"MONDO:0011258","xrefs":{"Monarch":{"xref_id":"0011258"}}}


id: PBO:0043297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain containing 16A","termid":"PBO:0043297"}


id: PR:G2TRQ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam11 gene.","definition_xrefs":["UniProtKB:G2TRQ6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D1.17","synonyms":[{"name":"Spom972h-tam11","type":"exact"},{"name":"transcripts altered in meiosis protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRQ6"}


id: GO:0097714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a viscosity stimulus.","definition_xrefs":["PMID:7061416","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to viscosity","termid":"GO:0097714"}


id: PBO:0045717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E2F transcription factor 3 pseudogene 1","termid":"PBO:0045717"}


id: SO:1000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Sequence variant increases the stability (half-life) of the transcript.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000083 sequence_variant_increasing_transcript_stability (obsolete SO:1000083)","synonyms":[{"name":"mutation increasing transcript stability","type":"related"},{"name":"sequence variant increasing transcript stability","type":"exact"}],"termid":"SO:1000083"}


id: GO:0102013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + L-glutamate(out) -> ADP + phosphate + L-glutamate(in).","definition_xrefs":["RHEA:29035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled polar amino acid-transporter activity","termid":"GO:0015426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ATPase-coupled L-glutamate tranmembrane transporter activity","secondary_identifiers":["MetaCyc:ABC-13-RXN"],"synonyms":[{"name":"L-glutamate-importing ATPase activity","type":"related"}],"termid":"GO:0102013"}


id: GO:0021827
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of olfactory bulb interneuron precursors in the cerebral cortex that occurs after birth.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dgh","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex tangential migration using cell-cell interactions","termid":"GO:0021823"},{"relation_name":"is_a","term_name":"tangential migration from the subventricular zone to the olfactory bulb","termid":"GO:0022028"},{"relation_name":"part_of","term_name":"olfactory bulb interneuron development","termid":"GO:0021891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"postnatal olfactory bulb interneuron migration","termid":"GO:0021827"}


id: PATO:0001522
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in sound by virtue of the bearer's travelling speed in a given medium under specified conditions.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Sound_speed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"speed","termid":"PATO:0000008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound speed","termid":"PATO:0001522"}


id: PBO:0063657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 2","termid":"PBO:0063657"}


id: PBO:0086192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to nucleases that forms a complex with Pbp1p; complex may mediate posttranscriptional regulation of HO; involved in propagation of M2 dsRNA satellite of L-A virus; allelic variation affects mitochondrial genome stability, drug resistance, and more; forms cytoplasmic foci upon DNA replication stress; localization to P-bodies under ethanol stress differs between strains","termid":"PBO:0086192"}


id: GO:0039595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a virus increases the frequency, rate or extent of the breakdown of host messenger RNA (mRNA).","definition_xrefs":["PMID:16477041","PMID:12163576","PMID:17360652","PMID:22696660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host gene expression","termid":"GO:0039656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated degradation of host mRNA","secondary_identifiers":["VZ:901"],"synonyms":[{"name":"induction by virus of catabolism of host mRNA","type":"exact"},{"name":"induction by virus of host mRNA catabolic process","type":"exact"},{"name":"induction of host mRNA decay","type":"exact"},{"name":"promotion of host mRNA degradation","type":"exact"},{"name":"viral induction of host mRNA decay","type":"exact"},{"name":"virus-mediated mRNA decay","type":"exact"}],"termid":"GO:0039595"}


id: PBO:0017753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold subunit Apc4/Cut20","termid":"PBO:0017753"}


id: PBO:0044412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily J member 2","termid":"PBO:0044412"}


id: GO:0005191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete acidic epididymal glycoprotein (obsolete GO:0005191)","synonyms":[{"name":"acidic epididymal glycoprotein","type":"exact"}],"termid":"GO:0005191"}


id: GO:0032921
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of 4 protein subunits as a heterotetramer, that possesses sarcosine oxidase activity.","definition_xrefs":["GOC:mah","GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sarcosine oxidase complex","termid":"GO:0032921"}


id: PBO:0085224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Para-aminobenzoate (PABA) synthase; has similarity to Escherichia coli PABA synthase components PabA and PabB; required for the synthesis of para-aminobenzoic acid, an important intermediate for folate and ubiquinone Q biosynthesis; protein abundance increases in response to DNA replication stress","termid":"PBO:0085224"}


id: GO:0160293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a sodium-translocating NADH-quinone reductase complex.","definition_xrefs":["PMID:26644436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"sodium-translocating NADH-quinone reductase complex assembly","synonyms":[{"name":"Na(+)-NQR complex assembly","type":"exact"},{"name":"Na(+)-translocating NADH-quinone reductase complex assembly","type":"exact"}],"termid":"GO:0160293"}


id: GO:0035797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group from S-adenosyl-L-methionine to tellurite [TeO3(2-)]. Methylated derivatives of tellurite include Te(CH3)2 (dimethyltelluride) and Te2(CH3)2 (dimethylditelluride).","definition_xrefs":["PMID:11053398","GOC:bf","GOC:kad","PMID:21244361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tellurite methyltransferase activity","synonyms":[{"name":"S-adenosyl-L-methionine-dependent tellurite methyltransferase activity","type":"exact"},{"name":"SAM-dependent tellurite methyltransferase activity","type":"exact"},{"name":"tellurite methylase activity","type":"broad"}],"termid":"GO:0035797"}


id: GO:0008283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:mb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell population proliferation","synonyms":[{"name":"cell proliferation","type":"related"}],"termid":"GO:0008283"}


id: FYECO:0000153
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which diethyl maleate was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ diethyl maleate","synonyms":[{"name":"diethyl maleate added","type":"exact"}],"termid":"FYECO:0000153"}


id: MONDO:0020057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uniparental disomy of paternal origin (obsolete MONDO:0020057)","secondary_identifiers":["icd11.foundation:2028476598","Orphanet:98154","SCTID:726402006"],"termid":"MONDO:0020057","xrefs":{"Monarch":{"xref_id":"0020057"}}}


id: PBO:0075699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing regulatory glutamic acid and lysine rich protein 1","termid":"PBO:0075699"}


id: PBO:0005814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase delta subunit (predicted)","termid":"PBO:0005814"}


id: MONDO:0015305
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare endometriosis.","gene_count":0,"genotype_count":0,"name":"obsolete rare endometriosis (obsolete MONDO:0015305)","secondary_identifiers":["ICD10CM:N80.5","SCTID:237117005","ICD10CM:N80.6","ICD10CM:N80.0","ICD10CM:N80.1","ICD10CM:N80.3","ICD10CM:N80.4","Orphanet:137820"],"synonyms":[{"name":"endometriosis outside pelvis","type":"exact"},{"name":"extrapelvic endometriosis","type":"related"},{"name":"rare endometriosis","type":"exact"},{"name":"rare endometriosis (disease)","type":"exact"}],"termid":"MONDO:0015305","xrefs":{"Monarch":{"xref_id":"0015305"}}}


id: GO:0061611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways in which mannose, the aldohexose manno-hexose, is converted to fructose-6-phosphate.","definition_xrefs":["ISBN:0879010479","ISBN:0201090910","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose 6-phosphate metabolic process","termid":"GO:0006002"},{"relation_name":"is_a","term_name":"mannose catabolic process","termid":"GO:0019309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"mannose to fructose-6-phosphate catabolic process","synonyms":[{"name":"mannose metabolism to fructose-6-phosphate","type":"exact"}],"termid":"GO:0061611"}


id: GO:0060475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin polymerization as part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament polymerization involved in acrosome reaction (obsolete GO:0060475)","synonyms":[{"name":"positive regulation of actin polymerization involved in acrosome reaction","type":"related"}],"termid":"GO:0060475"}


id: SO:0002155
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A genomic region in which there is an exchange of genetic material as a result of the repair of meiosis-specific double strand breaks that occur during meiotic prophase.","definition_xrefs":["NCBI:cf","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic_recombination_region","synonyms":[{"name":"INSDC_feature:misc_recomb","type":"broad"},{"name":"INSDC_qualifier:meiotic","type":"exact"},{"name":"INSDC_qualifier:meiotic_recombination","type":"exact"},{"name":"meiotic recombination region","type":"exact"}],"termid":"SO:0002155"}


id: MONDO:0032624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 19","secondary_identifiers":["DOID:0112085","MEDGEN:1648450","OMIM:618241","GARD:16326","UMLS:C4748791"],"synonyms":[{"name":"MC1DN19","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 19","type":"related"}],"termid":"MONDO:0032624","xrefs":{"Monarch":{"xref_id":"0032624"}}}


id: GO:0004757
data:
  {"annotated_genes":["SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110563],"is_not":false,"summary":null,"term":"GO:0004757"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: 7,8-dihydrobiopterin + NADP+ = sepiapterin + NADPH + H+ and (6R)-L-erythro-5,6,7,8-tetrahydrobiopterin + 2 NADP+ = 6-pyruvoyl-5,6,7,8-tetrahydropterin + 2 H+ + 2 NADPH.","definition_xrefs":["EC:1.1.1.153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"sepiapterin reductase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1497869","MetaCyc:SEPIAPTERIN-REDUCTASE-RXN","Reactome:R-HSA-1475414"],"synonyms":[{"name":"7,8-dihydrobiopterin:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0004757","terms_by_termid":{"GO:0004757":null}}


id: GO:0002793
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peptide secretion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of peptide secretion","termid":"GO:0002791"},{"relation_name":"is_a","term_name":"positive regulation of secretion","termid":"GO:0051047"},{"relation_name":"positively_regulates","term_name":"peptide secretion","termid":"GO:0002790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of peptide secretion","synonyms":[{"name":"activation of peptide secretion","type":"narrow"},{"name":"stimulation of peptide secretion","type":"narrow"},{"name":"up regulation of peptide secretion","type":"exact"},{"name":"up-regulation of peptide secretion","type":"exact"},{"name":"upregulation of peptide secretion","type":"exact"}],"termid":"GO:0002793"}


id: MONDO:0030985
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 19","secondary_identifiers":["DOID:0112278","MEDGEN:1779702","UMLS:C5543229","OMIM:619245"],"synonyms":[{"name":"POF19","type":"exact"},{"name":"premature ovarian failure 19","type":"exact"}],"termid":"MONDO:0030985","xrefs":{"Monarch":{"xref_id":"0030985"}}}


id: GO:0070179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of D-serine, the D-enantiomer of serine, i.e. (2R)-2-amino-3-hydroxypropanoic acid. D-serine is often formed by racemization of L-serine.","definition_xrefs":["GOC:jsg","GOC:mah","CHEBI:16523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-amino acid biosynthetic process","termid":"GO:0046437"},{"relation_name":"is_a","term_name":"D-serine metabolic process","termid":"GO:0070178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"D-serine biosynthetic process","synonyms":[{"name":"D-serine anabolism","type":"exact"},{"name":"D-serine biosynthesis","type":"exact"},{"name":"D-serine formation","type":"exact"},{"name":"D-serine synthesis","type":"exact"}],"termid":"GO:0070179"}


id: PR:O74478
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1840.05c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribomutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.05c","synonyms":[{"name":"PGM 3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PRM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC1840.05c","type":"exact"},{"name":"phosphoglucomutase 3 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74478"}


id: PBO:0056465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated serine/threonine kinase 3","termid":"PBO:0056465"}


id: GO:0004135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->6)-alpha-D-glucosidic branch linkages in glycogen phosphorylase limit dextrin. Limit dextrin is the highly branched core that remains after exhaustive treatment of glycogen with glycogen phosphorylase. It is formed because these enzymes cannot hydrolyze the (1->6) glycosidic linkages present.","definition_xrefs":["EC:3.2.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"amylo-alpha-1,6-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.33-RXN","Reactome:R-HSA-71593"],"synonyms":[{"name":"amylo-1,6-glucosidase activity","type":"exact"},{"name":"amylopectin 1,6-glucosidase activity","type":"related"},{"name":"dextrin 6-alpha-D-glucosidase activity","type":"related"},{"name":"dextrin-1,6-glucosidase activity","type":"related"},{"name":"glycogen phosphorylase-limit dextrin alpha-1,6-glucohydrolase activity","type":"related"}],"termid":"GO:0004135"}


id: GO:1900490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of hydroxymethylglutaryl-CoA reductase (NADPH) activity.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity (obsolete GO:1900490)","synonyms":[{"name":"activation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"activation of HMG-CoA reductase activity","type":"broad"},{"name":"activation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"narrow"},{"name":"positive regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"positive regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"up regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"},{"name":"up-regulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"up-regulation of HMG-CoA reductase activity","type":"broad"},{"name":"up-regulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"},{"name":"upregulation of 3-hydroxy-3-methylglutaryl-coenzyme A reductase activity","type":"broad"},{"name":"upregulation of HMG-CoA reductase activity","type":"broad"},{"name":"upregulation of hydroxymethylglutaryl-CoA reductase (NADPH) activity","type":"exact"}],"termid":"GO:1900490"}


id: PBO:0013463
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichostatin A suppresses accumulation of septated cells, but does not restore wild-type checkpoint function, in rad3delta or rad3-36 mutant","termid":"PBO:0013463"}


id: PBO:0065778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine rich 1","termid":"PBO:0065778"}


id: PBO:0072355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 41","termid":"PBO:0072355"}


id: GO:0097700
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any response to laminar fluid shear stress in a vascular endothelial cell.","definition_xrefs":["GOC:BHF","GOC:BHF_miRNA","PMID:21768538","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to laminar fluid shear stress","termid":"GO:0071499"},{"relation_name":"is_a","term_name":"vascular endothelial cell response to fluid shear stress","termid":"GO:0097699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular endothelial cell response to laminar fluid shear stress","secondary_identifiers":["Reactome:R-HSA-9856530"],"synonyms":[{"name":"blood vessel endothelial cell response to laminar fluid shear stress","type":"exact"}],"termid":"GO:0097700"}


id: PR:Q92365
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl3601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q92365"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L36-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.05","synonyms":[{"name":"Spom972h-rpl3601","type":"exact"}],"termid":"PR:Q92365"}


id: PBO:0041998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 47","termid":"PBO:0041998"}


id: PBO:0003837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retrotransposable element: pseudo","termid":"PBO:0003837"}


id: PBO:0075145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 1","termid":"PBO:0075145"}


id: PBO:0038550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 5","termid":"PBO:0038550"}


id: PBO:0043218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic linker associated protein 2","termid":"PBO:0043218"}


id: PBO:0077208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane 7 superfamily member 2","termid":"PBO:0077208"}


id: PBO:0057981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3908","termid":"PBO:0057981"}


id: PBO:0063309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycomb group ring finger 3","termid":"PBO:0063309"}


id: GO:0001084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIID class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIID-class binding (obsolete GO:0001084)","synonyms":[{"name":"TFIID-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001084"}


id: GO:0047342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-galactose 1-phosphate + dTTP = diphosphate + dTDP-D-galactose.","definition_xrefs":["RHEA:17165","EC:2.7.7.32"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotidyltransferase activity","termid":"GO:0016779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016779","GO:0003674"],"is_obsolete":false,"name":"galactose-1-phosphate thymidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.32-RXN","KEGG_REACTION:R02329"],"synonyms":[{"name":"dTDP galactose pyrophosphorylase activity","type":"related"},{"name":"dTDP-galactose diphosphorylase activity","type":"related"},{"name":"dTDP-galactose pyrophosphorylase activity","type":"related"},{"name":"dTTP:alpha-D-galactose-1-phosphate thymidylyltransferase activity","type":"related"},{"name":"galactose 1-phosphate thymidylyl transferase activity","type":"related"},{"name":"thymidine diphosphogalactose pyrophosphorylase activity","type":"related"},{"name":"thymidine triphosphate:alpha-D-galactose 1-phosphate thymidylyltransferase activity","type":"related"}],"termid":"GO:0047342"}


id: PBO:0046861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase","termid":"PBO:0046861"}


id: MONDO:0007580
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esterase ES-2, regulator for (obsolete MONDO:0007580)","secondary_identifiers":["OMIM:133300"],"synonyms":[{"name":"esterase ES-2, regulator for","type":"exact"}],"termid":"MONDO:0007580","xrefs":{"Monarch":{"xref_id":"0007580"}}}


id: GO:0086009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across a membrane such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"membrane repolarization","termid":"GO:0086009"}


id: GO:1904018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vasculature development.","definition_xrefs":["GO_REF:0000058","PMID:21472453","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of vasculature development","termid":"GO:1901342"},{"relation_name":"positively_regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vasculature development","synonyms":[{"name":"activation of vascular system development","type":"related"},{"name":"activation of vasculature development","type":"narrow"},{"name":"positive regulation of vascular system development","type":"related"},{"name":"up regulation of vascular system development","type":"related"},{"name":"up regulation of vasculature development","type":"exact"},{"name":"up-regulation of vascular system development","type":"related"},{"name":"up-regulation of vasculature development","type":"exact"},{"name":"upregulation of vascular system development","type":"related"},{"name":"upregulation of vasculature development","type":"exact"}],"termid":"GO:1904018"}


id: MONDO:0017194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blount disease is characterized by disturbed growth of the inner portion of the upper tibial extremity, progressively leading to bowlegged deformity with bone angulation just below the knee (tibia varus). In 60% of cases, the condition affects both legs.","definition_xrefs":["Orphanet:2768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Blount disease","secondary_identifiers":["icd11.foundation:138830223","MEDGEN:104499","MESH:C536237","SCTID:79353000","ICD9:736.89","NCIT:C118460","GARD:916","MedDRA:10072255","UMLS:C0175756","DOID:14798"],"synonyms":[{"name":"Blount disease","type":"exact"},{"name":"Blount's disease","type":"exact"},{"name":"Blount-Barber syndrome","type":"related"},{"name":"Erlacher-Blount syndrome","type":"related"},{"name":"Osteochondrosis deformans tibiae","type":"exact"},{"name":"Osteochondrosis deformans tibiae, familial infantile type","type":"related"},{"name":"familial infantile type osteochondrosis deformans tibiae","type":"exact"},{"name":"infantile tibia vara","type":"exact"},{"name":"tibia vara","type":"related"},{"name":"tibia vara Blount","type":"exact"}],"termid":"MONDO:0017194","xrefs":{"Monarch":{"xref_id":"0017194"}}}


id: MONDO:0016721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pineal tumor of neuroepithelial tissue (obsolete MONDO:0016721)","secondary_identifiers":["Orphanet:251905"],"termid":"MONDO:0016721","xrefs":{"Monarch":{"xref_id":"0016721"}}}


id: PBO:0079034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 3-1","termid":"PBO:0079034"}


id: FYPO:0006539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell contains more than one septum during a cellular response to a pheromone.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"multiseptate cell during cellular response to pheromone","termid":"FYPO:0006539"}


id: GO:0016727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an oxygen molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","secondary_identifiers":["EC:1.17.3.-"],"termid":"GO:0016727"}


id: GO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with leukotriene B4, LTB4, to initiate a change in cell activity. Leukotriene B4 is also known as (6Z, 8E, 10E, 14Z)-(5S, 12R)-5,12-dihydroxyicosa-6,8,10,14-tetraen-1-oate.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukotriene receptor activity","termid":"GO:0004974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"leukotriene B4 receptor activity","synonyms":[{"name":"BLT receptor","type":"narrow"}],"termid":"GO:0001632"}


id: GO:2001287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocytosis","termid":"GO:0045806"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"negatively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"negative regulation of caveolin-mediated endocytosis","synonyms":[{"name":"negative regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"negative regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"negative regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001287"}


id: PBO:0036415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane-actinomyosin ring linker protein Sbg1","termid":"PBO:0036415"}


id: GO:0048533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized floral cell acquires the specialized features of a sporocyte. Sporocytes are the haploid spores of angiosperms. Once formed, they undergo meiotic divisions to form microspores and megaspores.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sporocyte differentiation","synonyms":[{"name":"sporocyte development","type":"narrow"},{"name":"sporocyte morphogenesis","type":"related"}],"termid":"GO:0048533"}


id: PR:Q09116
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- spn2 gene.","definition_xrefs":["UniProtKB:Q09116","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin homolog spn2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.06","synonyms":[{"name":"Spom972h-spn2","type":"exact"}],"termid":"PR:Q09116"}


id: GO:2000636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of primary microRNA processing.","definition_xrefs":["GOC:dph","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of miRNA processing","termid":"GO:1903800"},{"relation_name":"is_a","term_name":"regulation of primary miRNA processing","termid":"GO:2000634"},{"relation_name":"positively_regulates","term_name":"primary miRNA processing","termid":"GO:0031053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of primary miRNA processing","synonyms":[{"name":"positive regulation of pri-miRNA processing","type":"exact"},{"name":"positive regulation of primary microRNA processing","type":"exact"}],"termid":"GO:2000636"}


id: PBO:0088332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial thioredoxin family protein, implicated in sulfur cluster assembly","termid":"PBO:0088332"}


id: GO:1902140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an inositol stimulus.","definition_xrefs":["GOC:TermGenie","PMID:16496115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to inositol","termid":"GO:1902140"}


id: PBO:0029748
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_sequestered_calcium_level","termid":"PBO:0029748"}


id: PBO:0030345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_hypoxia","termid":"PBO:0030345"}


id: PBO:0040050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARPC1B pseudogene 1","termid":"PBO:0040050"}


id: GO:0015931
data:
  {"annotated_genes":["SJAG_00434","SJAG_02757","SJAG_02425","SJAG_01652","SJAG_00375","SJAG_00339","SJAG_04622","SJAG_03503","SJAG_01467","SJAG_02661","SJAG_01449","SJAG_04480","SJAG_03358","SJAG_04162","SJAG_00760","SJAG_00471","SJAG_02050","SJAG_01083","SJAG_04115","SJAG_03002","SJAG_04697","SJAG_03283","SJAG_01715","SJAG_04310","SJAG_04589","SJAG_01529","SJAG_02520","SJAG_00298","SJAG_03156","SJAG_02209","SJAG_03300","SJAG_04406","SJAG_03593","SJAG_01374","SJAG_00178","SJAG_04360","SJAG_00612","SJAG_04017","SJAG_01185","SJAG_03729","SJAG_04325","SJAG_00641","SJAG_04379","SJAG_05328","SJAG_02534","SJAG_03470","SJAG_03986","SJAG_04148","SJAG_03693","SJAG_04202","SJAG_04472","SJAG_04721","SJAG_01013","SJAG_01584","SJAG_04645","SJAG_04328","SJAG_04347","SJAG_03299","SJAG_01177","SJAG_00154","SJAG_03334","SJAG_00093","SJAG_01960","SJAG_01065","SJAG_04656","SJAG_02704","SJAG_00992","SJAG_03847","SJAG_02274","SJAG_04083","SJAG_04536","SJAG_03452"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60224],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035348"},{"annotations":[76666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[95346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036085"},{"annotations":[73745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990570"},{"annotations":[64919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[103381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[59419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[104872,59418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[72449],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990559"},{"annotations":[109595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[94915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[119330,79454,74666,78627,63503,76028,61928,103172,82134,74750,91495],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[75134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[65796,58930,60367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051028"},{"annotations":[103883,76319,118372,113176,109668,79270,120090,121009,116518,117862,82357,111905,98957,75133,94203,76413,76659,118114,76088,103417,75704,105959,113804,98545,112477,73343,104666,77630,74980,71846],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[81134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[77534,96001,82022,107091,77092,98140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[104572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[107775,80507,74107,107304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[81092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[81488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"},{"annotations":[76806,90378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097624"},{"annotations":[77948],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072334"},{"annotations":[77010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015786"},{"annotations":[114430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120112"},{"annotations":[79530],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990569"},{"annotations":[67821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015790"}]},"cv_name":"biological_process","definition":"The directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound 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id: PBO:0079914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase hinge protein","termid":"PBO:0079914"}


id: PBO:0052990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laminin subunit alpha 2","termid":"PBO:0052990"}


id: GO:0033634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of cell-cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"positive regulation of cell adhesion mediated by integrin","termid":"GO:0033630"},{"relation_name":"is_a","term_name":"regulation of cell-cell adhesion mediated by integrin","termid":"GO:0033632"},{"relation_name":"positively_regulates","term_name":"cell-cell adhesion mediated by integrin","termid":"GO:0033631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell-cell adhesion mediated by integrin","synonyms":[{"name":"positive regulation of cell-cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033634"}


id: GO:1905265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of blasticidin S.","definition_xrefs":["PMID:23874663","GOC:TermGenie","Wikipedia:Blasticidin_S","GO_REF:0000068","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleoside catabolic process","termid":"GO:0046135"},{"relation_name":"is_a","term_name":"blasticidin S metabolic process","termid":"GO:1905264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"blasticidin S catabolic process","synonyms":[{"name":"blasticidin S breakdown","type":"exact"},{"name":"blasticidin S catabolism","type":"exact"},{"name":"blasticidin S degradation","type":"exact"}],"termid":"GO:1905265"}


id: FYPO:0002457
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is viable, is elongated, is curved along the long axis, and contains one or more abnormal septa. In a curved cell, the long axis follows a smooth bend rather than a straight line.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable curved elongated vegetative cell","termid":"FYPO:0002215"},{"relation_name":"is_a","term_name":"viable curved vegetative cell with abnormal septum","termid":"FYPO:0002456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0000005","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"viable curved elongated vegetative cell with abnormal septum","synonyms":[{"name":"curved elongated viable cell with abnormal septum","type":"exact"},{"name":"viable curved elongated abnormally septated vegetative cell","type":"exact"},{"name":"viable curved elongated cell with abnormal septum during vegetative growth","type":"exact"},{"name":"viable curved elongated vegetative cell with abnormal septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002457"}


id: PBO:0066505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X3","termid":"PBO:0066505"}


id: MONDO:0859300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal dominant","termid":"MONDO:0015362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244","MONDO:0005559"],"is_obsolete":false,"name":"neuronopathy, distal hereditary motor, autosomal dominant 10","secondary_identifiers":["OMIM:620080","UMLS:C5774234","DOID:0081399","MEDGEN:1824007"],"synonyms":[{"name":"neuronopathy, distal hereditary motor, type X","type":"exact"}],"termid":"MONDO:0859300","xrefs":{"Monarch":{"xref_id":"0859300"}}}


id: GO:0031419
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to cobalamin (vitamin B12), a water-soluble vitamin characterized by possession of a corrin nucleus containing a cobalt atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin binding","termid":"GO:0019842"},{"relation_name":"is_a","term_name":"tetrapyrrole binding","termid":"GO:0046906"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cobalamin binding","synonyms":[{"name":"vitamin B12 binding","type":"exact"}],"termid":"GO:0031419"}


id: MONDO:0007320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chondrocalcinosis","termid":"MONDO:0001314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"chondrocalcinosis due to apatite crystal deposition","secondary_identifiers":["UMLS:C1861580","MESH:C535939","OMIM:118610","MEDGEN:349317"],"synonyms":[{"name":"chondrocalcinosis due to apatite crystal deposition","type":"exact"},{"name":"familial apatite disease","type":"related"}],"termid":"MONDO:0007320","xrefs":{"Monarch":{"xref_id":"0007320"}}}


id: FYPO:0000464
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of intracellular transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transport during vegetative growth","termid":"FYPO:0005973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"decreased intracellular transport","synonyms":[{"name":"decreased intracellular transport during mitotic cell cycle","type":"related"},{"name":"decreased intracellular transport during vegetative growth","type":"exact"},{"name":"intracellular transport: decreased","type":"related"},{"name":"reduced intracellular transport","type":"exact"}],"termid":"FYPO:0000464"}


id: GO:1903797
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"positively_regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of inorganic anion transmembrane transport","synonyms":[{"name":"activation of inorganic anion membrane transport","type":"narrow"},{"name":"activation of inorganic anion transmembrane transport","type":"narrow"},{"name":"activation of transmembrane inorganic anion transport","type":"narrow"},{"name":"positive regulation of inorganic anion membrane transport","type":"exact"},{"name":"positive regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up regulation of inorganic anion membrane transport","type":"exact"},{"name":"up regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"up-regulation of inorganic anion membrane transport","type":"exact"},{"name":"up-regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"up-regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"upregulation of inorganic anion membrane transport","type":"exact"},{"name":"upregulation of inorganic anion transmembrane transport","type":"exact"},{"name":"upregulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903797"}


id: PBO:0074472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin like 1","termid":"PBO:0074472"}


id: PBO:0060776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B8 pseudogene 2","termid":"PBO:0060776"}


id: RO:0002086
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ends_after","termid":"RO:0002086"}


id: GO:0004309
data:
  {"annotated_genes":["SJAG_03964","SJAG_01154","SJAG_00570"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72535,73908,107224],"is_not":false,"summary":null,"term":"GO:0004309"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: polyphosphate(n) + H2O = polyphosphate(n-1) + phosphate.","definition_xrefs":["EC:3.6.1.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00570":null,"SJAG_01154":null,"SJAG_03964":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"exopolyphosphatase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21528","MetaCyc:EXOPOLYPHOSPHATASE-RXN"],"synonyms":[{"name":"Gra-Pase activity","type":"related"},{"name":"acid phosphoanhydride phosphohydrolase activity","type":"related"},{"name":"exopolypase activity","type":"related"},{"name":"metaphosphatase activity","type":"broad"},{"name":"polyphosphate phosphohydrolase activity","type":"related"}],"termid":"GO:0004309","terms_by_termid":{"GO:0004309":null}}


id: GO:0033780
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: taurochenodeoxycholate + O2 + reduced [NADPH--hemoprotein reductase] +  = taurohyocholate H+ + H2O + oxidized [NADPH--hemoprotein reductase]. Acts on taurochenodeoxycholate, taurodeoxycholate and less readily on lithocholate and chenodeoxycholate.","definition_xrefs":["EC:1.14.14.57"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"taurochenodeoxycholate 6alpha-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-7977"],"synonyms":[{"name":"CYP3A4","type":"related"},{"name":"CYP4A21","type":"related"},{"name":"taurochenodeoxycholate 6alpha-monooxygenase activity","type":"related"},{"name":"taurochenodeoxycholate,NADPH:oxygen oxidoreductase (6alpha-hydroxylating) activity","type":"related"}],"termid":"GO:0033780"}


id: PBO:0087445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit II of cytochrome c oxidase (Complex IV); Complex IV is the terminal member of the mitochondrial inner membrane electron transport chain; one of three mitochondrially-encoded subunits","termid":"PBO:0087445"}


id: MONDO:0013817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any preeclampsia in which the cause of the disease is a mutation in the CORIN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preeclampsia","termid":"MONDO:0005081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preeclampsia/eclampsia 5","secondary_identifiers":["UMLS:C3281288","GARD:18393","MEDGEN:482918","OMIM:614595"],"synonyms":[{"name":"CORIN preeclampsia","type":"exact"},{"name":"Corin preeclampsia","type":"exact"},{"name":"PEE5","type":"related"},{"name":"PREECLAMPSIA/eclampsia 5","type":"related"},{"name":"Preeclampsia/eclampsia type 5","type":"exact"},{"name":"preeclampsia caused by mutation in CORIN","type":"exact"},{"name":"preeclampsia caused by mutation in Corin","type":"exact"},{"name":"preeclampsia/eclampsia 5","type":"exact"}],"termid":"MONDO:0013817","xrefs":{"Monarch":{"xref_id":"0013817"}}}


id: GO:0033285
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + monocarboxylic acid(out/in) = ADP + phosphate + monocarboxylic acid(in/out).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"ATPase-coupled carboxylic acid transmembrane transporter activity","termid":"GO:0033284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"ATPase-coupled monocarboxylic acid transmembrane transporter activity","synonyms":[{"name":"ATP-dependent monocarboxylic acid transmembrane transporter activity","type":"exact"},{"name":"monocarboxylic acid-transporting ATPase activity","type":"exact"}],"termid":"GO:0033285"}


id: PBO:0045791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER degradation enhancing alpha-mannosidase like protein 1","termid":"PBO:0045791"}


id: MONDO:0000888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the mucous membranes lining the gastrointestinal tract.","definition_xrefs":["NCIT:C3853"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"mucositis","termid":"MONDO:0020579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"gastrointestinal mucositis","secondary_identifiers":["ICD9:558.9","DOID:0080178","MEDGEN:636691","UMLS:C0521585","ICD9:538","SCTID:95518006"],"synonyms":[{"name":"gastrointestinal system mucosa inflammation","type":"exact"},{"name":"gastrointestinal system mucosaitis","type":"exact"},{"name":"inflammation of gastrointestinal system mucosa","type":"exact"},{"name":"mucositis","type":"related"}],"termid":"MONDO:0000888","xrefs":{"Monarch":{"xref_id":"0000888"}}}


id: PBO:0031248
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_poly(A)+_mRNA_export_from_nucleus","termid":"PBO:0031248"}


id: GO:0034201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oleic acid stimulus.","definition_xrefs":["GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fatty acid","termid":"GO:0070542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to oleic acid","synonyms":[{"name":"response to oleate","type":"exact"}],"termid":"GO:0034201"}


id: MONDO:0025512
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that has its basis in the disruption of type II hypersensitivity.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"type II hypersensitivity reaction disease","synonyms":[{"name":"disorder of type II hypersensitivity","type":"exact"},{"name":"type II hypersensitivity disease","type":"exact"}],"termid":"MONDO:0025512","xrefs":{"Monarch":{"xref_id":"0025512"}}}


id: MONDO:0010927
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated cleft palate","termid":"MONDO:0007336"},{"relation_name":"is_a","term_name":"isolated cleft lip","termid":"MONDO:0016043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 3","secondary_identifiers":["UMLS:C1833369","MEDGEN:318860","DOID:0080397","MESH:C563448","OMIM:600757"],"synonyms":[{"name":"OFC3","type":"exact"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 3","type":"related"},{"name":"orofacial cleft 3","type":"exact"}],"termid":"MONDO:0010927","xrefs":{"Monarch":{"xref_id":"0010927"}}}


id: FYPO:0005723
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of protein methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0000707","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}


id: PBO:0068343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 114","termid":"PBO:0068343"}


id: MONDO:0002568
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Narrowing of the lumen of the trachea.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tracheal stenosis","secondary_identifiers":["ICD9:519.19","MESH:D014135","DOID:3227","UMLS:C0040583","MEDGEN:21227","NCIT:C78646","NANDO:2200194","SCTID:11296007"],"synonyms":[{"name":"stenosis of trachea","type":"exact"}],"termid":"MONDO:0002568","xrefs":{"Monarch":{"xref_id":"0002568"}}}


id: FYPO:0000131
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which mitotic spindle elongation, i.e. the process of lengthening the distance between poles of the mitotic spindle, is abnormal.","definition_xrefs":["PomBase:mah","GO:0000022"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal mitotic sister chromatid segregation","termid":"FYPO:0000141"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0000631","FYPO:0000641","FYPO:0001320"],"is_obsolete":false,"name":"abnormal mitotic spindle elongation","synonyms":[{"name":"abnormal mitotic spindle elongation during vegetative growth","type":"exact"},{"name":"abnormal spindle elongation during mitosis","type":"exact"},{"name":"abnormal spindle elongation during mitotic cell cycle","type":"related"},{"name":"spindle elongation defects","type":"exact"}],"termid":"FYPO:0000131"}


id: MONDO:0008862
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3-methylcrotonyl-CoA carboxylase deficiency in which the cause of the disease is a mutation in the MCCC2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylcrotonyl-CoA carboxylase deficiency","termid":"MONDO:0018950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylcrotonyl-CoA carboxylase 2 deficiency","secondary_identifiers":["MEDGEN:347898","DOID:0080580","MESH:C535309","UMLS:C1859499","GARD:9151","OMIM:210210"],"synonyms":[{"name":"3 alpha methylcrotonyl-CoA carboxylase 2 deficiency","type":"related"},{"name":"3 alpha methylcrotonylglycinuria 2","type":"related"},{"name":"3-METHYLCROTONYL-CoA carboxylase 2 deficiency","type":"related"},{"name":"3-Methylcrotonyl-CoA carboxylase 2 deficiency","type":"exact"},{"name":"3-methylcrotonyl-CoA carboxylase deficiency caused by mutation in MCCC2","type":"exact"},{"name":"3-methylcrotonylglycinuria 2","type":"related"},{"name":"MCC 2 deficiency","type":"related"},{"name":"MCC2 deficiency","type":"related"},{"name":"MCC2D","type":"related"},{"name":"MCCC2 3-methylcrotonyl-CoA carboxylase deficiency","type":"exact"},{"name":"methylcrotonylglycinuria type 2","type":"related"},{"name":"methylcrotonylglycinuria, type 2","type":"related"}],"termid":"MONDO:0008862","xrefs":{"Monarch":{"xref_id":"0008862"}}}


id: MONDO:1012576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypohidrotic ectodermal dysplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypohidrotic ectodermal dysplasia, non-human animal","termid":"MONDO:1012576","xrefs":{"Monarch":{"xref_id":"1012576"}}}


id: PBO:0088849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin/importin beta family nuclear import signal receptor Kap113","termid":"PBO:0088849"}


id: GO:1990385
data:
  {"annotated_genes":["SJAG_00930","SJAG_01837","SJAG_04412","SJAG_03073"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103446,105552,118724,120769],"is_not":false,"summary":null,"term":"GO:1990385"}]},"cv_name":"cellular_component","definition":"The area in the center of the meiotic spindle where the spindle microtubules from opposite poles overlap.","definition_xrefs":["GOC:kmv","PMID:12707312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle midzone","termid":"GO:0051233"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00930":null,"SJAG_01837":null,"SJAG_03073":null,"SJAG_04412":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630"],"is_obsolete":false,"name":"meiotic spindle midzone","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990385","terms_by_termid":{"GO:1990385":null}}


id: PBO:0001232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein","termid":"PBO:0001232"}


id: GO:0009638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism, or part of an organism, in response to a light stimulus, usually toward or away from it.","definition_xrefs":["GOC:mtg_far_red","GOC:jl","PMID:16870491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tropism","termid":"GO:0009606"},{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phototropism","secondary_identifiers":["Wikipedia:Phototropism"],"termid":"GO:0009638"}


id: PBO:0072883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF1 pseudogene 2","termid":"PBO:0072883"}


id: MONDO:0010697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ophthalmoplegia, external, and myopia","secondary_identifiers":["MEDGEN:326916","OMIM:311000","UMLS:C1839577","MESH:C564087"],"synonyms":[{"name":"OPEM","type":"exact"},{"name":"myopia-ophthalmoplegia syndrome","type":"related"},{"name":"ophthalmoplegia, external, and myopia","type":"exact"}],"termid":"MONDO:0010697","xrefs":{"Monarch":{"xref_id":"0010697"}}}


id: GO:0075003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of an appressorium of the symbiont to its host via adhesion molecules. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adhesion of symbiont infection structure to host","termid":"GO:0075001"},{"relation_name":"part_of","term_name":"appressorium formation","termid":"GO:0075016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adhesion of symbiont appressorium to host","synonyms":[{"name":"adhesion of symbiont appressorium to host during symbiotic interaction","type":"exact"}],"termid":"GO:0075003"}


id: MONDO:1012595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in cats due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, domestic cat","secondary_identifiers":["OMIA:000202-9685"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Felis catus (domestic cat)","type":"exact"}],"termid":"MONDO:1012595","xrefs":{"Monarch":{"xref_id":"1012595"}}}


id: PBO:0090612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial isoleucine-tRNA ligase","termid":"PBO:0090612"}


id: PBO:0035708
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035708"}


id: PBO:0063573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"period circadian regulator 3","termid":"PBO:0063573"}


id: GO:0045600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of adipocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of fat cell differentiation","termid":"GO:0045598"},{"relation_name":"positively_regulates","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fat cell differentiation","synonyms":[{"name":"activation of fat cell differentiation","type":"narrow"},{"name":"positive regulation of adipocyte cell differentiation","type":"exact"},{"name":"positive regulation of adipocyte differentiation","type":"exact"},{"name":"stimulation of fat cell differentiation","type":"narrow"},{"name":"up regulation of fat cell differentiation","type":"exact"},{"name":"up-regulation of fat cell differentiation","type":"exact"},{"name":"upregulation of fat cell differentiation","type":"exact"}],"termid":"GO:0045600"}


id: FYPO:0005952
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome occupancy is normal (i.e. indistinguishable from wild type) in chromatin regions where RNA polymerase II actively transcribes genes. Nucleosome occupancy measures the tendency for DNA in a given region to be packaged into nucleosomes.","definition_xrefs":["PMID:28218250","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nucleosome positioning in euchromatin","termid":"FYPO:0000857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes","synonyms":[{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during mitotic cell cycle","type":"related"},{"name":"normal nucleosome occupancy at highly transcribed RNA polymerase II genes during vegetative growth","type":"exact"}],"termid":"FYPO:0005952"}


id: PBO:0043866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crumbs cell polarity complex component 3 pseudogene 1","termid":"PBO:0043866"}


id: PBO:0079750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 1","termid":"PBO:0079750"}


id: GO:0018461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fluoren-9-ol + 2 NADP+ = fluoren-9-one + 2 NADPH + 2 H+.","definition_xrefs":["EC:1.1.1.256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"fluoren-9-ol dehydrogenase activity","secondary_identifiers":["MetaCyc:9-FLUORENOL-DEHYDROGENASE-RXN","UM-BBD_reactionID:r0408"],"synonyms":[{"name":"9-fluorenol dehydrogenase activity","type":"exact"},{"name":"fluoren-9-ol:NAD(P)+ oxidoreductase activity","type":"related"}],"termid":"GO:0018461"}


id: PBO:0052659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 27","termid":"PBO:0052659"}


id: GO:0038114
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-21 binding to a receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:nhn","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to interleukin-21","termid":"GO:0098757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-21-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9020958"],"synonyms":[{"name":"IL-21-mediated signaling pathway","type":"exact"},{"name":"interleukin-21-mediated signalling pathway","type":"exact"}],"termid":"GO:0038114"}


id: FYPO:0004648
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly of the mitotic spindle begins later than normal.","definition_xrefs":["PomBase:mah","GO:0090307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle assembly","termid":"FYPO:0000177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000054","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000641","FYPO:0000337"],"is_obsolete":false,"name":"delayed onset of mitotic spindle assembly","synonyms":[{"name":"delayed mitotic spindle assembly","type":"exact"},{"name":"delayed onset of abnormal mitotic spindle assembly during vegetative growth","type":"exact"},{"name":"delayed onset of bipolar mitotic spindle formation","type":"exact"},{"name":"delayed onset of spindle assembly during mitotic cell cycle","type":"exact"},{"name":"delayed onset of spindle assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0004648"}


id: MONDO:1011938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis and palatoschisis syndrome, non-human animal","secondary_identifiers":["OMIA:000070"],"termid":"MONDO:1011938","xrefs":{"Monarch":{"xref_id":"1011938"}}}


id: PBO:0000911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase Ade3 (predicted)","termid":"PBO:0000911"}


id: PBO:0056435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 8","termid":"PBO:0056435"}


id: PBO:0057922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3648-1","termid":"PBO:0057922"}


id: GO:0033338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a medial fin over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fin development","termid":"GO:0033333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"medial fin development","synonyms":[{"name":"median fin development","type":"exact"}],"termid":"GO:0033338"}


id: GO:0034560
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: bisphenol A + NADH + H+ + O2 = 2,2-bis(4-hydroxyphenyl)-1-propanol + NAD+ + H2O.","definition_xrefs":["UM-BBD_reactionID:r0861"],"gene_count":0,"genotype_count":0,"name":"obsolete bisphenol A hydroxylase A activity (obsolete GO:0034560)","termid":"GO:0034560"}


id: PBO:0062575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 4 pseudogene","termid":"PBO:0062575"}


id: PBO:0052098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel subfamily A member 1","termid":"PBO:0052098"}


id: PBO:0080537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASH and IL9R antisense RNA 2","termid":"PBO:0080537"}


id: PBO:0003495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCF ubiquitin ligase complex subunit Skp1","termid":"PBO:0003495"}


id: MONDO:0013578
data:
  {"annotated_genes":["SJAG_04980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87898],"is_not":false,"summary":null,"term":"MONDO:0013578"}]},"cv_name":"mondo","definition":"An autosomal dominant non-syndromic intellectual disability that has material basis in an autosomal dominant mutation of DYRK1A on chromosome 21q22.13.","definition_xrefs":["DOID:0070037"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04980":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"DYRK1A-related intellectual disability syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5568143","MEDGEN:1799566","OMIM:614104","Orphanet:464306","GARD:13527"],"synonyms":[{"name":"MRD7","type":"exact"},{"name":"autosomal dominant intellectual disability 7","type":"exact"},{"name":"autosomal dominant mental retardation 7","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 7","type":"related"},{"name":"intellectual disability, autosomal dominant 7","type":"related"},{"name":"intellectual disability, autosomal dominant type 7","type":"exact"},{"name":"mental retardation, autosomal dominant 7","type":"related"},{"name":"mental retardation, autosomal dominant type 7","type":"exact"}],"termid":"MONDO:0013578","terms_by_termid":{"MONDO:0013578":null},"xrefs":{"Monarch":{"xref_id":"0013578"}}}


id: PBO:0050009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HK2 divergent transcript","termid":"PBO:0050009"}


id: PBO:0082610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Co-chaperone that stimulates the ATPase activity of Ssa1p; required for a late step of ribosome biogenesis; associated with the cytosolic large ribosomal subunit; contains a J-domain; mutation causes defects in fluid-phase endocytosis","termid":"PBO:0082610"}


id: PBO:0111768
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE","termid":"PBO:0111768"}


id: SO:0001252
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A radiation hybrid map is a physical map.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_part","term_name":"STS","termid":"SO:0000331"},{"relation_name":"is_a","term_name":"fragment_assembly","termid":"SO:0001249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RH_map","synonyms":[{"name":"RH map","type":"exact"},{"name":"radiation hybrid map","type":"exact"}],"termid":"SO:0001252"}


id: SO:0001475
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a primary transcript, that is removed via trans splicing.","definition_xrefs":["PMID:16401417","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outron","termid":"SO:0001475"}


id: PBO:0066791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 90","termid":"PBO:0066791"}


id: GO:0048731
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an organismal system over time, from its formation to the mature structure. A system is a regularly interacting or interdependent group of organs or tissues that work together to carry out a given biological process.","definition_xrefs":["GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"system development","termid":"GO:0048731"}


id: PBO:0002996
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene reporter system","termid":"PBO:0002996"}


id: CHEBI:61049
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tacrolimus (anhydrous)","termid":"CHEBI:61049"}


id: PBO:0089297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase Ted1","termid":"PBO:0089297"}


id: PBO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_Zeocin","termid":"PBO:0035955"}


id: GO:0005337
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a nucleoside, a nucleobase linked to either beta-D-ribofuranose (ribonucleoside) or 2-deoxy-beta-D-ribofuranose, (a deoxyribonucleotide) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transmembrane transporter activity","termid":"GO:0015932"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"nucleoside transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-727768","Reactome:R-HSA-9755035","Reactome:R-HSA-9751024","Reactome:R-HSA-727740","Reactome:R-HSA-109534","Reactome:R-HSA-9754929","Reactome:R-HSA-109529","Reactome:R-HSA-727749","Reactome:R-HSA-109536","Reactome:R-HSA-9755015","Reactome:R-HSA-5628807","Reactome:R-HSA-109527","Reactome:R-HSA-727767"],"synonyms":[{"name":"intracellular nucleoside transmembrane transporter activity","type":"narrow"}],"termid":"GO:0005337"}


id: FYPO:0000963
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0000139","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on hydroxyurea","synonyms":[{"name":"normal cell population growth in presence of hydroxyurea","type":"exact"},{"name":"normal cell population growth on HU","type":"exact"},{"name":"normal cell population growth on hydroxyurea","type":"exact"},{"name":"normal vegetative cell population growth on hydroxyurea","type":"exact"}],"termid":"FYPO:0000963"}


id: PBO:0066914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 216","termid":"PBO:0066914"}


id: PATO:0000166
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000166 absolute time (obsolete PATO:0000166)","termid":"PATO:0000166"}


id: GO:0050584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: linoleate + O2 = (9Z,11S,12Z)-11-hydroperoxyoctadeca-9,12-dienoate.","definition_xrefs":["RHEA:18993","EC:1.13.11.45"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"linoleate 11-lipoxygenase activity","secondary_identifiers":["KEGG_REACTION:R05718","MetaCyc:1.13.11.45-RXN"],"synonyms":[{"name":"linoleate dioxygenase activity","type":"related"},{"name":"linoleate:oxygen 11S-oxidoreductase activity","type":"related"},{"name":"manganese lipoxygenase activity","type":"related"}],"termid":"GO:0050584"}


id: PBO:0004600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin exportin T Los1 (predicted)","termid":"PBO:0004600"}


id: GO:1901117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephamycin C.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"cephamycin C catabolic process","synonyms":[{"name":"cephamycin C breakdown","type":"exact"},{"name":"cephamycin C catabolism","type":"exact"},{"name":"cephamycin C degradation","type":"exact"}],"termid":"GO:1901117"}


id: PBO:0054574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1976","termid":"PBO:0054574"}


id: FYECO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were chilled by placing them on ice.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chilled cells","synonyms":[{"name":"cold","type":"related"},{"name":"ice","type":"related"}],"termid":"FYECO:0000202"}


id: PBO:0088821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein Phf1","termid":"PBO:0088821"}


id: PBO:0075168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D2 pseudogene 2","termid":"PBO:0075168"}


id: MONDO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign and malignant neoplasms which arise from or metastasize to the optic or second cranial nerve which extends from the optic disk of the eye and joins the optic chiasm. Clinical features may include visual loss, proptosis, and local pain. The majority of optic nerve tumors or optic gliomas.","definition_xrefs":["NCIT:C4801"],"direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"},{"relation_name":"is_a","term_name":"cranial nerve neoplasm","termid":"MONDO:0002633"},{"relation_name":"is_a","term_name":"central nervous system neoplasm","termid":"MONDO:0006130"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"optic nerve neoplasm","secondary_identifiers":["SCTID:395505000","UMLS:C0524802","EFO:1001073","MEDGEN:101181","MESH:D019574","ICD9:239.7","DOID:3419"],"synonyms":[{"name":"cranial nerve II neoplasm","type":"exact"},{"name":"cranial nerve II neoplasm (disease)","type":"exact"},{"name":"cranial nerve II neoplasms","type":"exact"},{"name":"cranial nerve II tumor","type":"exact"},{"name":"cranial nerve II tumour","type":"exact"},{"name":"neoplasm of cranial nerve II","type":"exact"},{"name":"neoplasm of optic nerve","type":"exact"},{"name":"neoplasm of second cranial nerve","type":"exact"},{"name":"neoplasm of the optic nerve","type":"exact"},{"name":"neoplasm of the second cranial nerve","type":"exact"},{"name":"neoplasms, optic nerve","type":"exact"},{"name":"neoplasms, second cranial nerve","type":"exact"},{"name":"optic nerve neoplasm","type":"exact"},{"name":"optic nerve neoplasms","type":"exact"},{"name":"optic nerve tumor","type":"exact"},{"name":"optic nerve tumour","type":"exact"},{"name":"second cranial nerve neoplasm","type":"exact"},{"name":"second cranial nerve neoplasms","type":"exact"},{"name":"second cranial nerve tumor","type":"exact"},{"name":"second cranial nerve tumour","type":"exact"},{"name":"tumor of cranial nerve II","type":"exact"},{"name":"tumor of optic nerve","type":"exact"},{"name":"tumor of second cranial nerve","type":"exact"},{"name":"tumor of the optic nerve","type":"exact"},{"name":"tumor of the second cranial nerve","type":"exact"},{"name":"tumour of cranial nerve II","type":"exact"},{"name":"tumour of optic nerve","type":"exact"},{"name":"tumour of second cranial nerve","type":"exact"},{"name":"tumour of the optic nerve","type":"exact"},{"name":"tumour of the second cranial nerve","type":"exact"}],"termid":"MONDO:0002640","xrefs":{"Monarch":{"xref_id":"0002640"}}}


id: PBO:0039044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL4 intronic transcript 1","termid":"PBO:0039044"}


id: PBO:0075619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sepiapterin reductase","termid":"PBO:0075619"}


id: MONDO:0021233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"disorder of ear","termid":"MONDO:0021205"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear neoplasm","secondary_identifiers":["MEDGEN:4431","NCIT:C3000","UMLS:C0013449"],"synonyms":[{"name":"Ear neoplasms","type":"exact"},{"name":"Ear tumor","type":"exact"},{"name":"Ear tumour","type":"exact"},{"name":"ear neoplasm (disease)","type":"exact"},{"name":"ear tumor","type":"exact"},{"name":"ear tumour","type":"exact"},{"name":"neoplasm of Ear","type":"exact"},{"name":"neoplasm of ear","type":"exact"},{"name":"neoplasm of the Ear","type":"exact"},{"name":"tumor of Ear","type":"exact"},{"name":"tumor of ear","type":"exact"},{"name":"tumor of the Ear","type":"exact"},{"name":"tumour of Ear","type":"exact"},{"name":"tumour of ear","type":"exact"},{"name":"tumour of the Ear","type":"exact"}],"termid":"MONDO:0021233","xrefs":{"Monarch":{"xref_id":"0021233"}}}


id: PBO:0059867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myotubularin related protein 4","termid":"PBO:0059867"}


id: PBO:0031646
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_respiration","termid":"PBO:0031646"}


id: MONDO:0022697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of cerebral palsy characterized by involuntary, purposeless writhing movements which affect the hands, feet, arms, and legs; the face and tongue may be affected as well, leading to involuntary grimacing, drooling, dysarthria and difficulty eating.","definition_xrefs":["NCIT:C97169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral palsy","termid":"MONDO:0006497"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"athetoid cerebral palsy","secondary_identifiers":["SCTID:75019001","ICD10CM:G80.3","MEDGEN:82853","DOID:0050672","SCTID:230780007","UMLS:C0270742"],"synonyms":[{"name":"ADCP","type":"related"},{"name":"athetoid cerebral palsy","type":"exact"},{"name":"athetoid dyskinetic cerebral palsy","type":"exact"},{"name":"cerebral palsy dyskinetic","type":"related"},{"name":"dyskinetic cerebral palsy","type":"exact"}],"termid":"MONDO:0022697","xrefs":{"Monarch":{"xref_id":"0022697"}}}


id: PBO:0041405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6 open reading frame 120","termid":"PBO:0041405"}


id: MONDO:0018788
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete COL4A1 or COL4A2-related cerebral small vessel disease (obsolete MONDO:0018788)","secondary_identifiers":["Orphanet:477759"],"synonyms":[{"name":"COL4A1 or COL4A2-related cerebral angiopathy","type":"exact"}],"termid":"MONDO:0018788","xrefs":{"Monarch":{"xref_id":"0018788"}}}


id: PBO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CS pseudogene 3","termid":"PBO:0044029"}


id: GO:0071642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of macrophage inflammatory protein 1 alpha.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of chemokine production","termid":"GO:0032722"},{"relation_name":"is_a","term_name":"regulation of macrophage inflammatory protein 1 alpha production","termid":"GO:0071640"},{"relation_name":"positively_regulates","term_name":"macrophage inflammatory protein-1 alpha production","termid":"GO:0071608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of macrophage inflammatory protein 1 alpha production","synonyms":[{"name":"positive regulation of CCL3 production","type":"exact"},{"name":"positive regulation of MIP-1a production","type":"exact"},{"name":"positive regulation of chemokine (C-C motif) ligand 3 production","type":"exact"},{"name":"positive regulation of macrophage inflammatory protein production","type":"broad"}],"termid":"GO:0071642"}


id: MONDO:0009326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart block that occurs on or before 28 days of life.","definition_xrefs":["PMID:22368629"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic cardiac rhythm disease (obsolete MONDO:0015110)","termid":"MONDO:0015110"},{"relation_name":"is_a","term_name":"atrioventricular block","termid":"MONDO:0000465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart block","secondary_identifiers":["MedDRA:10019263","SCTID:46619002","GARD:6164","Orphanet:60041","NANDO:2200214","DOID:990","icd11.foundation:1096954866","ICD10CM:Q24.6","MEDGEN:57432","ICD9:746.86","MESH:C535758","NORD:1218","OMIM:234700","UMLS:C0149530"],"synonyms":[{"name":"congenital atrioventricular block","type":"exact"},{"name":"heart block, congenital","type":"related"}],"termid":"MONDO:0009326","xrefs":{"Monarch":{"xref_id":"0009326"}}}


id: PBO:0083774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nuclear envelope integral membrane protein; interacts with chromatin, helping to maintain normal chromatin architecture and transcriptional regulation of certain loci at the nuclear envelope; interacts and functions with Apq12p and Brl1p in lipid homeostasis; mutants are defective in nuclear pore complex biogenesis, nuclear envelope morphology, mRNA nuclear export, and are sensitive to sterol biosynthesis inhibitors and membrane fluidizing agents; homologous to Brl1p","termid":"PBO:0083774"}


id: MONDO:0010303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete colobomatous microphthalmia (obsolete MONDO:0010303)","termid":"MONDO:0010303","xrefs":{"Monarch":{"xref_id":"0010303"}}}


id: MOD:01854
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds one oxygen atom to a sulfur atom of a residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur monooxygenated residue","termid":"MOD:01854"}


id: PBO:0041065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain protein I3","termid":"PBO:0041065"}


id: MONDO:0007864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital vascular bone syndrome (CVBS) characterized by the presence of a vascular malformation in a limb, mainly of the arteriovenous type, which results in overgrowth of the affected limb.","definition_xrefs":["Orphanet:2346"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin vascular disease","termid":"MONDO:0019293"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"},{"relation_name":"is_a","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis","termid":"MONDO:0019755"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angioosteohypertrophic syndrome","secondary_identifiers":["NORD:1337","DOID:2926","MEDGEN:9646","MESH:D007715","NANDO:2201030","GARD:3122","NCIT:C84801","OMIM:149000","icd11.foundation:1561120378","MedDRA:10051452","NANDO:1200884","Orphanet:90308","SCTID:721105004","UMLS:C0022739"],"synonyms":[{"name":"KTS","type":"related"},{"name":"Klippel Trenaunay syndrome","type":"exact"},{"name":"Klippel-Trenaunay Syndrome","type":"exact"},{"name":"Klippel-Trenaunay syndrome","type":"exact"},{"name":"Klippel-Trenaunay-Weber syndrome","type":"exact"},{"name":"Klippel-Trenaunay-Weber syndrome, Isolated cases","type":"exact"},{"name":"Klippel-Trénaunay syndrome","type":"exact"},{"name":"Klippel-Trénaunay-Weber syndrome","type":"exact"},{"name":"Ktw syndrome","type":"related"},{"name":"Weber-Klippel-Trenaunay","type":"exact"},{"name":"angio-osteohypertrophy syndrome","type":"related"},{"name":"angioosteohypertrophy syndrome","type":"exact"},{"name":"haemangiectatic hypertrophy","type":"exact"}],"termid":"MONDO:0007864","xrefs":{"Monarch":{"xref_id":"0007864"}}}


id: GO:1905706
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitochondrial ATP synthesis coupled proton transport.","definition_xrefs":["GO_REF:0000058","PMID:12809520","GOC:TermGenie","PMID:15294286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of ATP biosynthetic process","termid":"GO:2001169"},{"relation_name":"regulates","term_name":"proton motive force-driven mitochondrial ATP synthesis","termid":"GO:0042776"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of mitochondrial ATP synthesis coupled proton transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905706","terms_by_termid":{"GO:1905707":null}}


id: MOD:01447
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine residue to N-(dihydroxymethyl)-L-methionine (not known as a natural, post-translational modification process).","definition_xrefs":["PubMed:12595263","PubMed:9159480","RESID:AA0493"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(dihydroxymethyl)-L-methionine (Met)","synonyms":[{"name":"(2S)-2-[(dihydroxymethyl)amino]-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"N-(dihydroxymethyl)-L-methionine","type":"exact"},{"name":"N-formyl-L-methionine hydrate","type":"exact"},{"name":"N-orthoformylmethionine","type":"exact"}],"termid":"MOD:01447"}


id: PBO:0024847
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin binding by Cdc13 and Mcm4 is mutually exclusive","termid":"PBO:0024847"}


id: PBO:0045324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 4","termid":"PBO:0045324"}


id: GO:0004052
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: arachidonate + O2 = (5Z,8Z,10E,12S,14Z)-12-hydroperoxyicosa-5,8,10,14-tetraenoate.","definition_xrefs":["RHEA:10428","EC:1.13.11.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"arachidonate 12(S)-lipoxygenase activity","secondary_identifiers":["Reactome:R-HSA-2161950","Reactome:R-HSA-9024983","Reactome:R-HSA-9025957","MetaCyc:ARACHIDONATE-12-LIPOXYGENASE-RXN","Reactome:R-HSA-9026006","Reactome:R-HSA-2161948","KEGG_REACTION:R01596","Reactome:R-HSA-2161964","Reactome:R-HSA-9026007"],"synonyms":[{"name":"12-lipoxygenase activity","type":"related"},{"name":"12Delta-lipoxygenase activity","type":"related"},{"name":"12S-lipoxygenase activity","type":"related"},{"name":"C-12 lipoxygenase activity","type":"related"},{"name":"LTA4 synthase activity","type":"related"},{"name":"arachidonate:oxygen 12-oxidoreductase activity","type":"related"},{"name":"delta12-lipoxygenase activity","type":"related"},{"name":"leukotriene A4 synthase","type":"broad"}],"termid":"GO:0004052"}


id: PBO:0087921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that binds IME1 Upstream Activation Signal (UAS)ru; COM2 transcription is regulated by Haa1p, Sok2p and Zap1p transcriptional activators; may bind the IME1 promoter under all growth conditions to negatively regulate its transcription in the absence of a positive regulator that binds more effectively; repressor activity may depend on phosphorylation by PKA; C. albicans homolog (MNL1) plays a role in adaptation to stress","termid":"PBO:0087921"}


id: PBO:0062822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OSER1 divergent transcript","termid":"PBO:0062822"}


