# terms

id: GO:0102761
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-eriodictyol + S-adenosyl-L-methionine = (S)-homoeriodictyol + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:60948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"eriodictyol 3'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-7753"],"termid":"GO:0102761"}


id: PBO:0034346
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_soma_location","termid":"PBO:0034346"}


id: GO:0007237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of Ssk2/Ssk22 proteins (obsolete GO:0007237)","synonyms":[{"name":"activation of Ssk2/Ssk22 proteins","type":"exact"}],"termid":"GO:0007237"}


id: GO:0045189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of CTGF, produced by human umbilical vein endothelial cells and by skin fibroblasts after activation with TGF-beta.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete connective tissue growth factor biosynthetic process (obsolete GO:0045189)","synonyms":[{"name":"CTGF biosynthesis","type":"exact"},{"name":"connective tissue growth factor anabolism","type":"exact"},{"name":"connective tissue growth factor biosynthesis","type":"exact"},{"name":"connective tissue growth factor formation","type":"exact"},{"name":"connective tissue growth factor synthesis","type":"exact"}],"termid":"GO:0045189"}


id: SO:0000124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Expressed in relatively constant amounts without regard to cellular environmental conditions such as the concentration of a particular substrate.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptionally_regulated","termid":"SO:0000123"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally_constitutive","synonyms":[{"name":"transcriptionally constitutive","type":"exact"}],"termid":"SO:0000124"}


id: MONDO:0002685
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choroid plexus carcinoma that occurs during childhood.","definition_xrefs":["NCIT:C124292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supratentorial cancer","termid":"MONDO:0002071"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"choroid plexus carcinoma","termid":"MONDO:0016718"},{"relation_name":"is_a","term_name":"childhood choroid plexus neoplasm","termid":"MONDO:0024744"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood choroid plexus carcinoma","secondary_identifiers":["MEDGEN:901899","UMLS:C1510426","DOID:3545"],"synonyms":[{"name":"childhood choroid plexus cancer","type":"related"},{"name":"childhood choroid plexus carcinoma","type":"exact"},{"name":"childhood choroid plexus neoplasm","type":"broad"},{"name":"choroid plexus carcinoma of childhood","type":"exact"},{"name":"paediatric choroid plexus carcinoma","type":"exact"},{"name":"pediatric choroid plexus carcinoma","type":"exact"}],"termid":"MONDO:0002685","xrefs":{"Monarch":{"xref_id":"0002685"}}}


id: MONDO:0006503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete episodic ataxia (obsolete MONDO:0006503)","termid":"MONDO:0006503","xrefs":{"Monarch":{"xref_id":"0006503"}}}


id: MONDO:0006559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic suppurative and cicatricial disease of the apocrine glands occurring chiefly in the axillae in women and in the groin and anal regions in men. It is characterized by poral occlusion with secondary bacterial infection, evolving into abscesses which eventually rupture. As the disease becomes chronic, ulcers appear, sinus tracts enlarge, fistulas develop, and fibrosis and scarring become evident.","definition_xrefs":["MESH:D017497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hidradenitis","termid":"MONDO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"hidradenitis suppurativa","secondary_identifiers":["EFO:1000710","SCTID:59393003","UMLS:C0162836","Orphanet:387","ICD10CM:L73.2","Wikipedia:Hidradenitis_suppurativa","DOID:2280","icd11.foundation:1621794154","MEDGEN:57993"],"synonyms":[{"name":"acne inversa","type":"exact"},{"name":"acne inversa, familial","type":"narrow"},{"name":"ectopic acne","type":"exact"},{"name":"fox den disease","type":"exact"},{"name":"hidradenitis suppurativa","type":"exact"},{"name":"pyoderma fistulans significa","type":"exact"},{"name":"verneuil disease","type":"exact"}],"termid":"MONDO:0006559","xrefs":{"Monarch":{"xref_id":"0006559"}}}


id: FYPO:0004937
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal during the first meiotic nuclear division. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiosis","termid":"FYPO:0002959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during meiosis I","synonyms":[{"name":"decreased RNA accumulation during meiosis I","type":"related"},{"name":"decreased RNA level during first meiotic nuclear division","type":"exact"},{"name":"decreased transcript level during meiosis I","type":"exact"},{"name":"reduced RNA level during meiosis I","type":"exact"}],"termid":"FYPO:0004937"}


id: PBO:0052122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCND3 intronic transcript 1","termid":"PBO:0052122"}


id: GO:0033697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the extent of heterochromatin formation; increases the size of a chromosomal region converted to heterochromatin.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of extent of heterochromatin assembly (obsolete GO:0033697)","synonyms":[{"name":"positive regulation of extent of heterochromatin formation","type":"exact"},{"name":"positive regulation of heterochromatin spreading","type":"related"}],"termid":"GO:0033697"}


id: PBO:0090848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar proton/calcium exchanger","termid":"PBO:0090848"}


id: PBO:0038850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 18","termid":"PBO:0038850"}


id: MONDO:1011968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal arthrogryposis syndrome, non-human animal","secondary_identifiers":["OMIA:001953"],"termid":"MONDO:1011968","xrefs":{"Monarch":{"xref_id":"1011968"}}}


id: _global:quality_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"a relation between a quality and an independent continuant (the bearer), in which the quality specifically depends on the bearer for its existence","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quality_of","secondary_identifiers":["RO:0000080"],"termid":"_global:quality_of"}


id: MONDO:0018149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare lysosomal storage disorder characterized biochemically by deficient beta-galactosidase activity and clinically by a wide range of variable neurovisceral, ophthalmological and dysmorphic features.","definition_xrefs":["Orphanet:354"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"gangliosidosis","termid":"MONDO:0017719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005328","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"GM1 gangliosidosis","secondary_identifiers":["NCIT:C84739","SCTID:124465002","SCTID:238025006","ICD9:277.6","UMLS:C0085131","DOID:3322","icd11.foundation:401105928","MEDGEN:43107","NANDO:2200558","GARD:10891","MESH:D016537","NANDO:1200066"],"synonyms":[{"name":"Beta galactosidase 1 deficiency","type":"related"},{"name":"Beta-galactosidase deficiency","type":"exact"},{"name":"Beta-galactosidase-1 deficiency","type":"exact"},{"name":"Beta-galactosidosis","type":"related"},{"name":"GLB 1 deficiency","type":"related"},{"name":"GLB1 deficiency","type":"exact"},{"name":"GM>1< gangliosidosis","type":"exact"},{"name":"Landing disease","type":"exact"},{"name":"Landing syndrome","type":"exact"},{"name":"beta-galactosidase deficiency","type":"exact"},{"name":"deficiency of beta-galactosidase","type":"exact"},{"name":"gangliosidosis GM1","type":"exact"}],"termid":"MONDO:0018149","xrefs":{"Monarch":{"xref_id":"0018149"}}}


id: MONDO:1010092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AA amyloidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy, non-human animal","termid":"MONDO:1010010"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"},{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AA amyloidosis, non-human animal","secondary_identifiers":["OMIA:000038"],"termid":"MONDO:1010092","xrefs":{"Monarch":{"xref_id":"1010092"}}}


id: GO:0008320
data:
  {"annotated_genes":["SJAG_03358","SJAG_02208","SJAG_02330","SJAG_05259","SJAG_04218","SJAG_03415","SJAG_03515","SJAG_01879","SJAG_03560","SJAG_00959","SJAG_01640","SJAG_04996","SJAG_03502","SJAG_02077"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69563,75167,75385,75576,75929,76953,80691,80910,81090,108204],"is_not":false,"summary":null,"term":"GO:0008320"},{"annotations":[109603,109626,107218,105302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a protein from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"},{"relation_name":"is_a","term_name":"protein transporter activity","termid":"GO:0140318"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00959":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140318"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140318","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"protein transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9698930","Reactome:R-HSA-5244506","Reactome:R-HSA-5250616","Reactome:R-HSA-9698933","Reactome:R-HSA-5244404","Reactome:R-HSA-5246514","Reactome:R-HSA-5210947","Reactome:R-HSA-9636375","Reactome:R-HSA-5205661","GO:0015463","GO:0015266","Reactome:R-HSA-1299475","Reactome:R-HSA-3149434","Reactome:R-HSA-5210943","Reactome:R-HSA-5228406","Reactome:R-HSA-5244428","Reactome:R-HSA-1268022","Reactome:R-HSA-5250884","Reactome:R-HSA-5250972","Reactome:R-HSA-5229111","Reactome:R-HSA-184269","Reactome:R-HSA-5336420"],"synonyms":[{"name":"protein channel activity","type":"related"}],"termid":"GO:0008320","terms_by_termid":{"GO:0008320":null,"GO:0015450":null}}


id: PBO:0088914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L37","termid":"PBO:0088914"}


id: GO:0008841
data:
  {"annotated_genes":["SJAG_00529"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81285],"is_not":false,"summary":null,"term":"GO:0008841"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + dihydropterate + L-glutamate = ADP + phosphate + dihydrofolate.","definition_xrefs":["EC:6.3.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00529":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"dihydrofolate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DIHYDROFOLATESYNTH-RXN","RHEA:23584"],"synonyms":[{"name":"7,8-dihydrofolate synthetase activity","type":"related"},{"name":"7,8-dihydropteroate:L-glutamate ligase (ADP) activity","type":"related"},{"name":"7,8-dihydropteroate:L-glutamate ligase (ADP-forming)","type":"related"},{"name":"DHFS activity","type":"related"},{"name":"FHFS activity","type":"related"},{"name":"FHFS/FPGS activity","type":"related"},{"name":"H(2)-folate synthetase activity","type":"related"},{"name":"H2-folate synthetase activity","type":"related"},{"name":"dihydrofolate synthetase activity","type":"related"},{"name":"dihydrofolate synthetase-folylpolyglutamate synthetase activity","type":"related"},{"name":"dihydropteroate:L-glutamate ligase (ADP-forming) activity","type":"related"},{"name":"folylpoly-(gamma-glutamate) synthetase-dihydrofolate synthase activity","type":"related"}],"termid":"GO:0008841","terms_by_termid":{"GO:0008841":null}}


id: PR:000050530
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H4, hhf1 gene translation product (Schizosaccharomyces pombe) that has had the initiator methionine removed and that has been dimethylated at the position equivalent to Lys-21 of the amino acid sequence represented by UniProtKB:P09322. UniProtKB:P09322, 2-103, Lys-21, MOD:00084.","definition_xrefs":["PRO:DAN","PMID:22150589","PomBase:VW"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4, hhf1 gene translation product (Schizosaccharomyces pombe)","termid":"PR:000050526"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hhf1/Me2(K20)","pombase_gene_id":"SPAC1834.03c","synonyms":[{"name":"PRO_0000158357, Lys-21, MOD:00084","type":"exact"},{"name":"PomBase_original_PRO_term_name: histone H4, hhf1 gene translation product, initiator methionine removed dimethylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hhf1/InitMet-/Me2:1","type":"exact"},{"name":"UniProtKB:P09322, 2-103, Lys-21, MOD:00084","type":"broad"},{"name":"hhf1/Me2(K20)","type":"exact"},{"name":"histone H4 K20me2 (Schizosaccharomyces pombe)","type":"broad"},{"name":"histone H4 hhf1 K20me2 (Schizosaccharomyces pombe)","type":"exact"}],"termid":"PR:000050530"}


id: GO:0031383
data:
  {"annotated_genes":["SJAG_01794","SJAG_02379","SJAG_03453","SJAG_04509","SJAG_00514"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92855,91879,95485,89902,113420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mating projection formation by unicellular fungi.","definition_xrefs":["PMID:14734532"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"regulates","term_name":"mating projection formation","termid":"GO:0031382"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02379":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of mating projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mating projection biogenesis","type":"related"}],"termid":"GO:0031383","terms_by_termid":{"GO:1902917":null}}


id: MONDO:0004595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute pulmonary heart disease (obsolete MONDO:0004595)","termid":"MONDO:0004595","xrefs":{"Monarch":{"xref_id":"0004595"}}}


id: FYPO:0006103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which cells form cytoplasmic microtubules that are shorter than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short cytoplasmic microtubules","termid":"FYPO:0002760"},{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during mitotic interphase","termid":"FYPO:0003625"},{"relation_name":"is_a","term_name":"abnormal interphase microtubules","termid":"FYPO:0006101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002399","FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"short interphase microtubules","synonyms":[{"name":"short cytoplasmic microtubules during interphase of mitotic cell cycle","type":"exact"},{"name":"short cytoplasmic microtubules during mitotic interphase","type":"exact"},{"name":"short interphase cytoplasmic microtubules","type":"exact"},{"name":"short interphase microtubules during vegetative growth","type":"exact"}],"termid":"FYPO:0006103"}


id: PR:Q09897
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfh1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.10c","synonyms":[{"name":"Chs four homolog 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfh1","type":"exact"}],"termid":"PR:Q09897"}


id: PBO:0000720
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Pap1","termid":"PBO:0000720"}


id: GO:2001062
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to xylan.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"xylan binding","termid":"GO:2001062"}


id: PBO:0068352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 130","termid":"PBO:0068352"}


id: PBO:0069065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 312, pseudogene","termid":"PBO:0069065"}


id: PR:O14326
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pub3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase pub3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.11c","synonyms":[{"name":"Spom972h-pub3","type":"exact"}],"termid":"PR:O14326"}


id: MOD:00746
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a tungsten atom or a cluster containing tungsten for hydrogen atoms, or that coordinates a tungsten ion.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal or metal cluster containing modified residue","termid":"MOD:00698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tungsten containing modified residue","synonyms":[{"name":"WRes","type":"exact"}],"termid":"MOD:00746"}


id: PBO:0045496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desmoglein 1","termid":"PBO:0045496"}


id: GO:0000762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Unidirectional transfer of genetic information triggered by to a pheromone signal.","definition_xrefs":["PMID:31191478","PMID:17360276","PMID:27021562","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidirectional conjugation","termid":"GO:0009291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pheromone-induced unidirectional conjugation","termid":"GO:0000762"}


id: GO:0007273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of synapse (obsolete GO:0007273)","synonyms":[{"name":"regulation of synapse","type":"exact"}],"termid":"GO:0007273"}


id: GO:0048538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the thymus over time, from its formation to the mature structure. The thymus is a symmetric bi-lobed organ involved primarily in the differentiation of immature to mature T cells, with unique vascular, nervous, epithelial, and lymphoid cell components.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic or lymphoid organ development","termid":"GO:0048534"},{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thymus development","termid":"GO:0048538"}


id: PATO:0002381
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  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A composition quality inhering in an bearer by virtue of the presence of long chain aliphatic lipids on the surface of an organism.","definition_xrefs":["PATOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"composition","termid":"PATO:0000025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"waxiness","termid":"PATO:0002381"}


id: PBO:0004836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur ATPase involved in ribosome biogenesis Rli1 (predicted)","termid":"PBO:0004836"}


id: GO:0098798
data:
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id: MONDO:0009190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epiphyseal dysplasia of femoral head, myopia, and deafness","secondary_identifiers":["OMIM:226950","MEDGEN:346470","UMLS:C1856918","MESH:C565585"],"synonyms":[{"name":"epiphyseal dysplasia of femoral head, myopia, and deafness","type":"exact"}],"termid":"MONDO:0009190","xrefs":{"Monarch":{"xref_id":"0009190"}}}


id: MONDO:1012044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital cerebellar anomaly, non-human animal","termid":"MONDO:1011835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cerebellar anomaly, pig","secondary_identifiers":["OMIA:000176-9823"],"termid":"MONDO:1012044","xrefs":{"Monarch":{"xref_id":"1012044"}}}


id: GO:0090600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of terminal, non-reducing alpha-(1->3)-linked alpha-D-glucose residues with release of alpha-D-glucose.","definition_xrefs":["GOC:sd","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-1,3-glucosidase activity (obsolete GO:0090600)","termid":"GO:0090600"}


id: MONDO:0003166
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pilocytic astrocytoma (obsolete MONDO:0003166)","termid":"MONDO:0003166","xrefs":{"Monarch":{"xref_id":"0003166"}}}


id: PBO:0057945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3670-1","termid":"PBO:0057945"}


id: MONDO:0016612
data:
  {"annotated_genes":["SJAG_02457","SJAG_01400"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[87726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"X-linked form of cerebellar ataxia.","definition_xrefs":["MONDO:patterns/x_linked"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hereditary cerebellar ataxia","termid":"MONDO:0100310"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01400":null,"SJAG_02457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"X-linked cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:247765","GARD:20665","DOID:0050953","DOID:0111828"],"synonyms":[{"name":"X-linked hereditary ataxia","type":"exact"},{"name":"cerebellar ataxia, X-linked","type":"exact"},{"name":"hereditary ataxia, X-linked","type":"exact"}],"termid":"MONDO:0016612","terms_by_termid":{"MONDO:0010524":null,"MONDO:0010547":null},"xrefs":{"Monarch":{"xref_id":"0016612"}}}


id: PBO:0003202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA U4","termid":"PBO:0003202"}


id: PBO:0029234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cell_lysis_during_cellular_response_to_non-ionic_osmotic_stress","termid":"PBO:0029234"}


id: PBO:0043978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 4 (pseudogene)","termid":"PBO:0043978"}


id: GO:0033609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving oxalate, the organic acid ethanedioate.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"oxalate metabolic process","synonyms":[{"name":"ethanedioate metabolic process","type":"exact"},{"name":"ethanedioic acid metabolic process","type":"exact"},{"name":"oxalate metabolism","type":"exact"},{"name":"oxalic acid metabolic process","type":"exact"}],"termid":"GO:0033609"}


id: GO:0031242
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a cell outer membrane consisting of gene products and protein complexes that are loosely bound to its external surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:mah","GOC:mtg_sensu","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of cell outer membrane","termid":"GO:0031244"},{"relation_name":"part_of","term_name":"external side of cell outer membrane","termid":"GO:0031240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of external side of cell outer membrane","synonyms":[{"name":"extrinsic to external leaflet of cell outer membrane","type":"exact"},{"name":"extrinsic to external side of cell outer membrane","type":"narrow"},{"name":"extrinsic to external side of outer membrane","type":"exact"}],"termid":"GO:0031242"}


id: PBO:0011146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"di-trans,poly-cis-decaprenylcistransferase (predicted)","termid":"PBO:0011146"}


id: PBO:0084063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein of the Ras superfamily; acts primarily on Sec4p, localizes to the bud site and bud tip; msb3 msb4 double mutation causes defects in secretion and actin organization; similar to the TBC-domain Tre2 oncogene; MSB4 has a paralog, MSB3, that arose from the whole genome duplication; human homolog USP6NL can complement yeast msb3 msb4 double null mutant","termid":"PBO:0084063"}


id: MONDO:0016809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, mitochondrial DNA maintenance syndrome characterized by cerebellar ataxia, sensory peripheral neuropathy, myoclonus, epilepsy, progressive cognitive impairment, late-onset ptosis and external ophthalmoplegia. Liver failure may also occur, most often in association with the use of antiepileptic drug sodium valproate.","definition_xrefs":["Orphanet:254881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory ataxic neuropathy, dysarthria, and ophthalmoparesis","termid":"MONDO:0011835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069","MONDO:0002320","MONDO:0005244"],"is_obsolete":false,"name":"spinocerebellar ataxia with epilepsy","secondary_identifiers":["MESH:C564395","UMLS:C1843852","MEDGEN:334510","icd11.foundation:1238648682","GARD:17229"],"synonyms":[{"name":"MSCAE","type":"exact"},{"name":"SCAE","type":"exact"},{"name":"mitochondrial spinocerebellar ataxia with epilepsy","type":"exact"}],"termid":"MONDO:0016809","xrefs":{"Monarch":{"xref_id":"0016809"}}}


id: MONDO:0006572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic, recurrent, pruritic inflammatory disorder of unknown etiology that affects the skin and mucus membranes. It presents with rashes and papules that tend to resolve spontaneously. It may be associated with hepatitis C. Certain drugs that contain arsenic or bismuth are associated with reactions mimicking lichen planus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"lichen disease","termid":"MONDO:0006570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen planus","secondary_identifiers":["ICD9:697.0","ICD10CM:L43","MESH:D008010","SCTID:4776004","MEDGEN:9753","DOID:9201","EFO:1000726","NCIT:C3189","UMLS:C0023646","icd11.foundation:1402978031","ICD10WHO:L43"],"synonyms":[{"name":"lichen ruber planus","type":"exact"},{"name":"lichen, ruber planus","type":"exact"},{"name":"ruber planus","type":"related"}],"termid":"MONDO:0006572","xrefs":{"Monarch":{"xref_id":"0006572"}}}


id: MONDO:0013482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Meckel syndrome in which the cause of the disease is a mutation in the TCTN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Meckel syndrome","termid":"MONDO:0018921"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meckel syndrome, type 8","secondary_identifiers":["GARD:15727","OMIM:613885","UMLS:C3836857","DOID:0070122","MEDGEN:854220"],"synonyms":[{"name":"MKS8","type":"exact"},{"name":"Meckel syndrome 8","type":"related"},{"name":"Meckel syndrome caused by mutation in TCTN2","type":"exact"},{"name":"Meckel syndrome, type 8","type":"exact"},{"name":"Meckel-Gruber syndrome, type 8","type":"exact"},{"name":"TCTN2 Meckel syndrome","type":"exact"}],"termid":"MONDO:0013482","xrefs":{"Monarch":{"xref_id":"0013482"}}}


id: FYPO:0006418
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the cleavage and rejoining of intermediates formed during meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27304859","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"},{"relation_name":"is_a","term_name":"normal cellular process during meiotic cell cycle","termid":"FYPO:0007277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal resolution of meiotic recombination intermediates","termid":"FYPO:0006418"}


id: MONDO:0033635
data:
  {"annotated_genes":["SJAG_03173"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87710],"is_not":false,"summary":null,"term":"MONDO:0033635"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03173":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436682","DOID:0070492","MEDGEN:1764816","GARD:16404","OMIM:619046"],"synonyms":[{"name":"MC4DN3","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 3","type":"exact"}],"termid":"MONDO:0033635","terms_by_termid":{"MONDO:0033635":null},"xrefs":{"Monarch":{"xref_id":"0033635"}}}


id: PATO:0001541
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amylose composition quality inhering in an bearer by virtue of the bearer's having high amount of amylose content.","definition_xrefs":["TO:TO"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amylose composition","termid":"PATO:0001539"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-glutinous","termid":"PATO:0001541"}


id: MONDO:0015791
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Precocious puberty caused by sex hormones.","definition_xrefs":["Wikipedia:Precocious_puberty#Peripheral"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"},{"relation_name":"is_a","term_name":"precocious puberty","termid":"MONDO:0000088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral precocious puberty","secondary_identifiers":["Orphanet:178040","MEDGEN:1842596","SCTID:736606009","UMLS:C5680513","icd11.foundation:1495024153","GARD:20141","NANDO:2200378"],"synonyms":[{"name":"GIPP","type":"exact"},{"name":"gonadotropin independent precocious puberty","type":"exact"},{"name":"gonadotropin-independent precocious puberty","type":"exact"},{"name":"precocious pseudopuberty","type":"exact"}],"termid":"MONDO:0015791","xrefs":{"Monarch":{"xref_id":"0015791"}}}


id: PBO:0040387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1B1 antisense RNA 1","termid":"PBO:0040387"}


id: PBO:0064007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 41","termid":"PBO:0064007"}


id: PBO:0047316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 1","termid":"PBO:0047316"}


id: GO:0008044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Behavior in a fully developed and mature organism, as seen in insects.","definition_xrefs":["GOC:bf","GOC:jid"],"gene_count":0,"genotype_count":0,"name":"obsolete adult behavior (sensu Insecta) (obsolete GO:0008044)","synonyms":[{"name":"adult behavior (sensu Insecta)","type":"exact"}],"termid":"GO:0008044"}


id: PBO:0060630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK associated protein 5 like","termid":"PBO:0060630"}


id: PBO:0004670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (cytosine) methyltransferase (predicted)","termid":"PBO:0004670"}


id: PBO:0035917
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_dNTP_level","termid":"PBO:0035917"}


id: GO:1900768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fonsecin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"fonsecin metabolic process","termid":"GO:1900767"},{"relation_name":"is_a","term_name":"naphtho-gamma-pyrone catabolic process","termid":"GO:1900786"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0019748"],"is_obsolete":false,"name":"fonsecin catabolic process","synonyms":[{"name":"fonsecin breakdown","type":"exact"},{"name":"fonsecin catabolism","type":"exact"},{"name":"fonsecin degradation","type":"exact"}],"termid":"GO:1900768"}


id: MONDO:0034212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chemotherapy-induced toxicity","termid":"MONDO:0800390"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methotrexate toxicity","secondary_identifiers":["MEDGEN:108272","Orphanet:565782","UMLS:C0568062"],"termid":"MONDO:0034212","xrefs":{"Monarch":{"xref_id":"0034212"}}}


id: PBO:0050816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronidase 1","termid":"PBO:0050816"}


id: PBO:0038820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 23","termid":"PBO:0038820"}


id: GO:1902460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesenchymal stem cell proliferation.","definition_xrefs":["GOC:pm","PMID:18672106","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stem cell proliferation","termid":"GO:0072091"},{"relation_name":"regulates","term_name":"mesenchymal stem cell proliferation","termid":"GO:0097168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesenchymal stem cell proliferation","synonyms":[{"name":"regulation of MSC proliferation","type":"exact"}],"termid":"GO:1902460"}


id: MONDO:0014846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome","termid":"MONDO:0018446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005027","MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 23","secondary_identifiers":["UMLS:C4750914","DOID:0111613","GARD:17677","MEDGEN:1667331","OMIM:616949","Orphanet:404493"],"synonyms":[{"name":"SCAR23","type":"exact"},{"name":"autosomal recessive cerebellar ataxia - epilepsy - intellectual disability syndrome due to TUD deficiency","type":"exact"},{"name":"spinocerebellar ataxia autosomal recessive type 23","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 23","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive type 23","type":"exact"}],"termid":"MONDO:0014846","xrefs":{"Monarch":{"xref_id":"0014846"}}}


id: PBO:0000148
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent duplication","termid":"PBO:0000148"}


id: GO:0019451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown into pyruvate of L-cystine, catalyzed by the enzyme cysteine dioxygenase (EC:1.13.11.20).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-cysteine catabolic process to pyruvate","termid":"GO:0019450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006790","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"L-cysteine catabolic process to pyruvate, using cysteine dioxygenase","secondary_identifiers":["MetaCyc:CYSTEINE-DEG-PWY"],"synonyms":[{"name":"L-cysteine breakdown to pyruvate, using cysteine dioxygenase","type":"exact"},{"name":"L-cysteine degradation to pyruvate, using cysteine dioxygenase","type":"exact"}],"termid":"GO:0019451"}


id: PBO:0049466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycophorin E (MNS blood group)","termid":"PBO:0049466"}


id: GO:1990514
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An RNA interference where the silencing signal spreads 5' along the target mRNA, outside of the initial target sequence. Typically involves the formation of secondary siRNAs formed when the initial mRNA target sequence functions as a template for 5' to 3' synthesis of new dsRNA.","definition_xrefs":["GOC:pf","PMID:24369430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transitive RNA interference","termid":"GO:0036453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"5' transitive RNA interference","termid":"GO:1990514"}


id: MONDO:0014413
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orofaciodigital syndrome type 14 is a rare subtype of orofaciodigital syndrome, with autosomal recessive inheritance and C2CD3 mutations, characterized by severe microcephaly, trigonocephaly, severe intellectual disability and micropenis, in addition to oral, facial and digital malformations (gingival frenulae, lingual hamartomas, cleft/lobulated tongue, cleft palate, telecanthus, up-slanting palpebral fissures, microretrognathia, postaxial polydactyly of hands and duplication of hallux). Corpus callosum agenesis and vermis hypoplasia with molar tooth sign, on brain imaging, are also associated.","definition_xrefs":["Orphanet:434179"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome type 14","secondary_identifiers":["MEDGEN:1635470","OMIM:615948","DOID:0060958","SCTID:763837007","GARD:13655","UMLS:C4706604"],"synonyms":[{"name":"C2CD3 orofaciodigital syndrome","type":"exact"},{"name":"OFD14","type":"exact"},{"name":"microcephaly-cerebral malformation-orofaciodigital syndrome","type":"exact"},{"name":"oral-facial-digital syndrome type 14","type":"exact"},{"name":"orofaciodigital syndrome 14","type":"related"},{"name":"orofaciodigital syndrome XIV","type":"related"},{"name":"orofaciodigital syndrome caused by mutation in C2CD3","type":"exact"},{"name":"orofaciodigital syndrome type 14","type":"exact"}],"termid":"MONDO:0014413","xrefs":{"Monarch":{"xref_id":"0014413"}}}


id: PBO:0069668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 945, pseudogene","termid":"PBO:0069668"}


id: MONDO:0012330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Talo-patello-scaphoid osteolysis is an extremely rare form of primary osteolysis, described in two sisters to date, characterized by bilateral osteolysis of the tali, scaphoids, and patellae (accompanied by periarticular swelling and pain) and short fourth metacarpals (brachydactyly type E), in the absence of renal disease. Autosomal recessive inheritance has been suggested.","definition_xrefs":["Orphanet:50809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary osteolysis","termid":"MONDO:0019707"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"talo-patello-scaphoid osteolysis","secondary_identifiers":["GARD:10061","MESH:C536894","MEDGEN:400611","OMIM:609655","UMLS:C1864784","icd11.foundation:1276091756"],"synonyms":[{"name":"singh-Williams-McAlister syndrome","type":"exact"},{"name":"talo-patello-scaphoid osteolysis, synovitis, and short fourth metacarpals","type":"related"}],"termid":"MONDO:0012330","xrefs":{"Monarch":{"xref_id":"0012330"}}}


id: PBO:0082626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of commitment complex; which defines first step in splicing pathway; essential protein that interacts with Mud2p and Prp40p, forming a bridge between the intron ends; also involved in nuclear retention of pre-mRNA; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0082626"}


id: PBO:0086949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ family nucleolar DNA helicase; role in genome integrity maintenance, chromosome synapsis, meiotic joint molecule/crossover formation; stimulates activity of Top3p; rapidly lost in response to rapamycin in Rrd1p-dependent manner; forms nuclear foci upon DNA replication stress; yeast SGS1 complements mutations in human homolog BLM implicated in Bloom syndrome; also similar to human WRN implicated in Werner syndrome; human BLM and WRN can each complement yeast null mutant","termid":"PBO:0086949"}


id: MONDO:0011317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microcephaly, severe, with skeletal anomalies including posterior rib-Gap defects","secondary_identifiers":["MESH:C566377","OMIM:603394","MEDGEN:400408","UMLS:C1863919"],"synonyms":[{"name":"microcephaly, severe, with skeletal anomalies including posterior rib-Gap defects","type":"exact"}],"termid":"MONDO:0011317","xrefs":{"Monarch":{"xref_id":"0011317"}}}


id: GO:0051165
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 2,5-dihydroxypyridine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridine-containing compound metabolic process","termid":"GO:0072524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2,5-dihydroxypyridine metabolic process","synonyms":[{"name":"2,5-dihydroxypyridine metabolism","type":"exact"},{"name":"pyridine-2,5-diol metabolic process","type":"exact"}],"termid":"GO:0051165"}


id: PBO:0084996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Na+/H+ and K+/H+ exchanger; required for intracellular sequestration of Na+ and K+; located in the vacuole and late endosome compartments; required for osmotolerance to acute hypertonic shock and for vacuolar fusion; ortholog of human NHE9, which is linked to autism","termid":"PBO:0084996"}


id: PBO:0117372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial AFG1 family ATPase/chaperone Afg1","termid":"PBO:0117372"}


id: PBO:0002966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase (RNR) inhibitor","termid":"PBO:0002966"}


id: MONDO:0800358
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"schizophrenia","termid":"MONDO:0005090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"schizophrenia 17","secondary_identifiers":["MEDGEN:482154","UMLS:C3280524"],"synonyms":[{"name":"SCZD17","type":"exact"}],"termid":"MONDO:0800358","xrefs":{"Monarch":{"xref_id":"0800358"}}}


id: PBO:0083974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-repressible ADP-ribosylation factor; GTPase of Ras superfamily involved in regulating cell polarity and invasive growth; localizes to dynamic spots at plasma membrane and modulates PtdIns(4,5)P2 levels to facilitate endocytosis; required for localization of endocytic protein Lsb5p to correct cortical site in cells; also has mRNA binding activity; homolog of mammalian Arf6","termid":"PBO:0083974"}


id: PBO:0059441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A12","termid":"PBO:0059441"}


id: SO:0001361
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Five_methoxycarbonylmethyl_2_prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methoxycarbonylmethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:069"],"synonyms":[{"name":"5-methoxycarbonylmethyl-2'-O-methyluridine","type":"exact"},{"name":"five methoxycarbonylmethyl two prime O methyluridine","type":"exact"},{"name":"mcm5Um","type":"exact"}],"termid":"SO:0001361"}


id: PBO:0036467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial DNA branch migration helicase Irc3 (predicted)","termid":"PBO:0036467"}


id: PBO:0049899
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERPUD2 antisense RNA 1","termid":"PBO:0049899"}


id: MONDO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Brown-Vialetto-van Laere syndrome (obsolete MONDO:0000406)","termid":"MONDO:0000406","xrefs":{"Monarch":{"xref_id":"0000406"}}}


id: PBO:0076620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin folding cofactor C","termid":"PBO:0076620"}


id: GO:1904070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ascaroside.","definition_xrefs":["GOC:kmv","GO_REF:0000068","PMID:25775534","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoside biosynthetic process","termid":"GO:0016138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ascaroside biosynthetic process","synonyms":[{"name":"ascaroside anabolism","type":"exact"},{"name":"ascaroside biosynthesis","type":"exact"},{"name":"ascaroside formation","type":"exact"},{"name":"ascaroside synthesis","type":"exact"}],"termid":"GO:1904070"}


id: PBO:0026871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_methylation_at_telomere","termid":"PBO:0026871"}


id: PBO:0054999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2414","termid":"PBO:0054999"}


id: GO:0032600
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a chemokine receptor out of a membrane raft.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport out of membrane raft","termid":"GO:0032599"},{"relation_name":"is_a","term_name":"chemokine receptor transport within lipid bilayer","termid":"GO:0033606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"chemokine receptor transport out of membrane raft","synonyms":[{"name":"chemokine receptor translocation out of membrane raft","type":"exact"},{"name":"chemokine receptor transport out of lipid raft","type":"exact"}],"termid":"GO:0032600"}


id: GO:0090168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reformation of the Golgi following its breakdown and partitioning contributing to Golgi inheritance.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi organization","termid":"GO:0007030"},{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Golgi inheritance","termid":"GO:0048313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"Golgi reassembly","synonyms":[{"name":"Golgi apparatus reassembly","type":"exact"}],"termid":"GO:0090168"}


id: GO:0005129
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a granulocyte macrophage colony-stimulating factor receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor binding","termid":"GO:0005126"},{"relation_name":"is_a","term_name":"growth factor receptor binding","termid":"GO:0070851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor binding","synonyms":[{"name":"GM-CSF receptor binding","type":"exact"},{"name":"GM-CSF receptor ligand","type":"narrow"},{"name":"GMC-SF receptor ligand","type":"narrow"},{"name":"granulocyte macrophage colony stimulating factor receptor binding","type":"exact"},{"name":"granulocyte macrophage colony-stimulating factor","type":"narrow"},{"name":"granulocyte macrophage colony-stimulating factor receptor ligand","type":"narrow"}],"termid":"GO:0005129"}


id: GO:0035808
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that initiates the formation of double-strand breaks (DSBs) required for meiotic recombination. Consists of a protein that catalyses formation of the double-strand breaks (Spo11 in S. cerevisiae and Rec12 in S. pombe), and a number of accessory proteins.","definition_xrefs":["GOC:vw","PMID:21429938","PMID:12897161","PMID:20364342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"condensed nuclear chromosome","termid":"GO:0000794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"meiotic recombination initiation complex","termid":"GO:0035808"}


id: PATO:0001017
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001017 relative occurence value (obsolete PATO:0001017)","termid":"PATO:0001017"}


id: PBO:0004786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LYHRT homolog","termid":"PBO:0004786"}


id: PBO:0005371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endoplasmic Reticulum metallopeptidase 1 (predicted)","termid":"PBO:0005371"}


id: MONDO:0015935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"germinoma","termid":"MONDO:0002598"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"extragonadal germinoma","secondary_identifiers":["MESH:D018237","Orphanet:182127","GARD:2005","MEDGEN:1673080","UMLS:C5190513","MedDRA:10018207"],"termid":"MONDO:0015935","xrefs":{"Monarch":{"xref_id":"0015935"}}}


id: GO:1905047
data:
  {"annotated_genes":["SJAG_00794","SJAG_00773","SJAG_04745","SJAG_02795"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100284],"is_not":false,"summary":null,"term":"GO:1905047"},{"annotations":[77767,79763,97324],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000073"}]},"cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a mitotic spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00794":null,"SJAG_02795":null,"SJAG_04745":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0008150","GO:0000226"],"is_obsolete":false,"name":"mitotic spindle pole body organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1905047","terms_by_termid":{"GO:0000073":null,"GO:1905047":null}}


id: PBO:0030174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spheroid_vegetative_cell","termid":"PBO:0030174"}


id: MONDO:0859334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spinocerebellar ataxia 50","secondary_identifiers":["MEDGEN:1824045","OMIM:620158","UMLS:C5774272"],"termid":"MONDO:0859334","xrefs":{"Monarch":{"xref_id":"0859334"}}}


id: GO:1900573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving emodin.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"emodin metabolic process","synonyms":[{"name":"emodin metabolism","type":"exact"}],"termid":"GO:1900573"}


id: FYPO:0002666
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which peptide-serine-N-acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal peptide-serine-N-acetyltransferase activity","termid":"FYPO:0002665"},{"relation_name":"is_a","term_name":"abolished peptide alpha-N-acetyltransferase activity","termid":"FYPO:0007842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000652","FYPO:0000661","FYPO:0001985"],"is_obsolete":false,"name":"abolished peptide-serine-N-acetyltransferase activity","synonyms":[{"name":"peptide-serine-N-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0002666"}


id: GO:0090437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a socket cell, a shoot epidermal cell that surrounds a trichome and provides its support.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant epidermal cell differentiation","termid":"GO:0090627"},{"relation_name":"part_of","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"socket cell differentiation","termid":"GO:0090437"}


id: MONDO:0003495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell tumor that arises from the ovary and is not associated with a germ cell tumor.","definition_xrefs":["NCIT:C40092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian epithelial tumor","termid":"MONDO:0002229"},{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian squamous cell neoplasm","secondary_identifiers":["DOID:5532"],"synonyms":[{"name":"ovarian squamous cell neoplasm","type":"exact"},{"name":"ovarian squamous cell tumor","type":"exact"},{"name":"ovarian squamous cell tumour","type":"exact"},{"name":"ovary squamous cell neoplasm","type":"exact"}],"termid":"MONDO:0003495","xrefs":{"Monarch":{"xref_id":"0003495"}}}


id: PBO:0066540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RGS5 antisense RNA 1","termid":"PBO:0066540"}


id: FYPO:0001633
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-phenylalanine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular phenylalanine level","termid":"FYPO:0001642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar phenylalanine level","synonyms":[{"name":"normal level of phenylalanine in vacuole","type":"exact"},{"name":"normal vacuolar L-phenylalanine level","type":"exact"},{"name":"normal vacuolar phenylalanine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar phenylalanine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001633"}


id: PBO:0113176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Karyopherin adaptor required for nuclear translocation of the proteasome; mediates interaction between nuclear import factor Srp1p and the proteasome; nuclear import of the 26S proteasome is coupled to RanGTP-initiated, ubiquitin-independent proteasomal degradation of Sts1p; Sts1p and Srp1p couple proteasomes to nascent polypeptides emerging from the ribosome for cotranslational degradation; role in ubiquitin-mediated protein degradation; contains a bipartite nuclear localization sequence","termid":"PBO:0113176"}


id: GO:0102028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-cysteine + O-phosphonato-L-homoserine = L-cystathionine + hydrogenphosphate.","definition_xrefs":["GOC:pz","PMID:5922970","PMID:9531508"],"gene_count":0,"genotype_count":0,"name":"obsolete cystathionine gamma-synthase activity (acts on O-phosphohomoserine) (obsolete GO:0102028)","termid":"GO:0102028"}


id: PBO:0065084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated catalytic subunit alpha 1","termid":"PBO:0065084"}


id: MONDO:0021056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any attenuated familial adenomatous polyposis in which the cause of the disease is a mutation in the APC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"attenuated familial adenomatous polyposis","termid":"MONDO:0016362"},{"relation_name":"is_a","term_name":"classic familial adenomatous polyposis","termid":"MONDO:0021055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis 1","secondary_identifiers":["DOID:0080409","OMIM:175100","MEDGEN:398651","UMLS:C2713442"],"synonyms":[{"name":"APC attenuated familial adenomatous polyposis","type":"exact"},{"name":"FAP1","type":"exact"},{"name":"Gardner syndrome","type":"related"},{"name":"adenoma, periampullary, somatic","type":"exact"},{"name":"adenomatous polyposis coli","type":"broad"},{"name":"adenomatous polyposis coli, attenuated","type":"related"},{"name":"adenomatous polyposis of the colon","type":"related"},{"name":"attenuated familial adenomatous polyposis caused by mutation in APC","type":"exact"},{"name":"brain tumor-polyposis syndrome 2","type":"related"},{"name":"familial adenomatous polyposis 1","type":"exact"},{"name":"familial adenomatous polyposis, attenuated","type":"related"},{"name":"familial polyposis of the colon","type":"related"},{"name":"polyposis, adenomatous intestinal","type":"related"}],"termid":"MONDO:0021056","xrefs":{"Monarch":{"xref_id":"0021056"}}}


id: PBO:0043448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 9","termid":"PBO:0043448"}


id: PR:Q9Y7T3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA(His) guanylyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04473","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(His) guanylyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.07","secondary_identifiers":["UniProtKB:Q9Y7T3"],"synonyms":[{"name":"Spom972h-THG1L","type":"exact"},{"name":"tRNA-histidine guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7T3"}


id: FYPO:0006430
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell is inviable, and contains a single nucleus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"mononucleate vegetative cell","termid":"FYPO:0000060"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"inviable mononucleate vegetative cell","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable mononucleate cell during vegetative growth","type":"exact"}],"termid":"FYPO:0006430","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0041806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"caspase recruitment domain family member 17, pseudogene","termid":"PBO:0041806"}


id: GO:0002754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of a ligand to an intracellular vesicle pattern recognition receptor (PRR). PRRs bind pathogen-associated molecular pattern (PAMPs), structures conserved among microbial species.","definition_xrefs":["GOC:add","PMID:15199967","GOC:ar","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0002753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"endosomal pattern recognition receptor signaling pathway","synonyms":[{"name":"intracellular endosomal pattern recognition receptor signaling pathway","type":"exact"},{"name":"intracellular vesicle PAMP receptor signaling pathway","type":"related"},{"name":"intracellular vesicle PRR signaling pathway","type":"related"},{"name":"intracellular vesicle pathogen receptor signaling pathway","type":"related"},{"name":"intracellular vesicle pattern recognition receptor signaling pathway","type":"related"},{"name":"intracellular vesicle pattern recognition receptor signalling pathway","type":"related"}],"termid":"GO:0002754"}


id: GO:0018928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving methyl ethyl ketone, a clear, colorless liquid with a fragrant, mint-like odor. It is used as a solvent and in making plastics, textiles and paints.","definition_xrefs":["UM-BBD_pathwayID:mek"],"gene_count":0,"genotype_count":0,"name":"obsolete methyl ethyl ketone metabolic process (obsolete GO:0018928)","synonyms":[{"name":"2-butanone metabolic process","type":"exact"},{"name":"2-butanone metabolism","type":"exact"},{"name":"MEK metabolic process","type":"exact"},{"name":"MEK metabolism","type":"exact"},{"name":"methyl ethyl ketone metabolism","type":"exact"}],"termid":"GO:0018928"}


id: GO:1900892
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of pentadecane metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of pentadecane metabolic process","termid":"GO:1900890"},{"relation_name":"positively_regulates","term_name":"pentadecane metabolic process","termid":"GO:1900633"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pentadecane metabolic process","synonyms":[{"name":"activation of pentadecane metabolic process","type":"narrow"},{"name":"activation of pentadecane metabolism","type":"narrow"},{"name":"positive regulation of pentadecane metabolism","type":"related"},{"name":"up regulation of pentadecane metabolic process","type":"exact"},{"name":"up regulation of pentadecane metabolism","type":"related"},{"name":"up-regulation of pentadecane metabolic process","type":"exact"},{"name":"up-regulation of pentadecane metabolism","type":"related"},{"name":"upregulation of pentadecane metabolic process","type":"exact"},{"name":"upregulation of pentadecane metabolism","type":"related"}],"termid":"GO:1900892"}


id: FYPO:0006016
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to urea. Cells stop growing (and may die) at a concentration of urea that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to urea","synonyms":[{"name":"hypersensitive to urea","type":"exact"},{"name":"sensitive to urea during mitotic cell cycle","type":"related"},{"name":"sensitive to urea during vegetative growth","type":"exact"}],"termid":"FYPO:0006016"}


id: PBO:0078889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 2-1","termid":"PBO:0078889"}


id: PBO:0017994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule-site clamp monopolin complex subunit Mde4","termid":"PBO:0017994"}


id: PBO:0082589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cis-Golgi localized monothiol glutaredoxin, binds Fe-S cluster; more similar in activity to dithiol than other monothiol glutaredoxins; involved in the oxidative stress response; GRX6 has a paralog, GRX7, that arose from the whole genome duplication","termid":"PBO:0082589"}


id: PR:O94317
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mucin-21 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03970","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized serine-rich protein C215.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.13","secondary_identifiers":["UniProtKB:O94317"],"synonyms":[{"name":"Spom972h-MUC21","type":"exact"}],"termid":"PR:O94317"}


id: PBO:0078304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (anticodon GTC) 2-9","termid":"PBO:0078304"}


id: MONDO:0004195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The developmental arrest and architectural distortion of the thymus that results in immunodeficiency.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymus gland disorder","termid":"MONDO:0003393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"thymic dysplasia","secondary_identifiers":["DOID:7350","UMLS:C1331541","NCIT:C27802","MEDGEN:231314"],"termid":"MONDO:0004195","xrefs":{"Monarch":{"xref_id":"0004195"}}}


id: GO:0039011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a pronephric nephron proximal tubule are generated and organized. A pronephric nephron tubule is an epithelial tube that is part of the pronephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephric nephron tubule morphogenesis","termid":"GO:0039008"},{"relation_name":"is_a","term_name":"proximal tubule morphogenesis","termid":"GO:0072158"},{"relation_name":"part_of","term_name":"pronephric proximal tubule development","termid":"GO:0035776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pronephric proximal tubule morphogenesis","synonyms":[{"name":"pronephros proximal tubule morphogenesis","type":"exact"}],"termid":"GO:0039011"}


id: PBO:0003512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR6 family, implicated in cell cycle","termid":"PBO:0003512"}


id: PR:000025005
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mfm3 gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:MSY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor mfm3","pombase_gene_id":"SPBPJ4664.03","synonyms":[{"name":"mfm3","type":"exact"}],"termid":"PR:000025005"}


id: FYPO:0002767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of terbinafine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002682"],"is_obsolete":false,"name":"resistance to terbinafine","synonyms":[{"name":"resistance to terbinafine during mitotic cell cycle","type":"related"},{"name":"resistance to terbinafine during vegetative growth","type":"exact"},{"name":"resistant to terbinafine","type":"exact"}],"termid":"FYPO:0002767"}


id: FYPO:0001470
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tacrolimus.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on tacrolimus","synonyms":[{"name":"normal cell population growth in presence of tacrolimus","type":"exact"},{"name":"normal cell population growth on tacrolimus","type":"exact"},{"name":"normal cellular response to FK506","type":"exact"},{"name":"normal cellular response to tacrolimus","type":"related"},{"name":"normal vegetative cell population growth on tacrolimus","type":"exact"}],"termid":"FYPO:0001470"}


id: PBO:0040979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BOC cell adhesion associated, oncogene regulated","termid":"PBO:0040979"}


id: GO:0052668
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,-6-trans-farnesol + CTP = 2-trans,-6-trans-farnesyl monophosphate + CDP + H+.","definition_xrefs":["PMID:21395888"],"gene_count":0,"genotype_count":0,"name":"obsolete CTP:farnesol kinase activity (obsolete GO:0052668)","synonyms":[{"name":"CTP:2-trans,-6-trans-farnesol kinase activity","type":"exact"},{"name":"CTP:2-trans,-6-trans-farnesol phosphotransferase activity","type":"exact"},{"name":"farnesol kinase activity","type":"related"},{"name":"farnesol phosphotransferase activity","type":"exact"},{"name":"trans,trans-farnesol kinase activity","type":"narrow"}],"termid":"GO:0052668"}


id: PBO:0082099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8-oxo-dGTP diphosphatase; prevents spontaneous mutagenesis via sanitization of oxidized purine nucleoside triphosphates; can also act as peroxisomal pyrophosphatase with specificity for coenzyme A and CoA derivatives, may function to remove potentially toxic oxidized CoA disulfide from peroxisomes to maintain the capacity for beta-oxidation of fatty acids; nudix hydrolase family member; similar E. coli MutT and human, rat and mouse MTH1","termid":"PBO:0082099"}


id: PBO:0087623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the CSN and 26S proteasome lid complexes; similar to mammalian p55 subunit and to another S. cerevisiae regulatory subunit, Rpn7p; Rpn5p is an essential protein; the COP9 signalosome is also known as the CSN","termid":"PBO:0087623"}


id: PBO:0030813
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_isocitrate_dehydrogenase_(NAD+)_activity","termid":"PBO:0030813"}


id: GO:1901429
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of syringal lignin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of syringal lignin biosynthetic process","termid":"GO:1901428"},{"relation_name":"negatively_regulates","term_name":"syringal lignin biosynthetic process","termid":"GO:1901066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of syringal lignin biosynthetic process","synonyms":[{"name":"down regulation of S-lignin biosynthetic process","type":"exact"},{"name":"down regulation of syringal lignin anabolism","type":"exact"},{"name":"down regulation of syringal lignin biosynthesis","type":"exact"},{"name":"down regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"down regulation of syringal lignin formation","type":"exact"},{"name":"down regulation of syringal lignin synthesis","type":"exact"},{"name":"down-regulation of S-lignin biosynthetic process","type":"exact"},{"name":"down-regulation of syringal lignin anabolism","type":"exact"},{"name":"down-regulation of syringal lignin biosynthesis","type":"exact"},{"name":"down-regulation of syringal lignin biosynthetic process","type":"exact"},{"name":"down-regulation of syringal lignin formation","type":"exact"},{"name":"down-regulation of syringal lignin synthesis","type":"exact"},{"name":"downregulation of S-lignin biosynthetic process","type":"exact"},{"name":"downregulation of syringal lignin anabolism","type":"exact"},{"name":"downregulation of syringal lignin biosynthesis","type":"exact"},{"name":"downregulation of syringal lignin biosynthetic process","type":"exact"},{"name":"downregulation of syringal lignin formation","type":"exact"},{"name":"downregulation of syringal lignin synthesis","type":"exact"},{"name":"inhibition of S-lignin biosynthetic process","type":"exact"},{"name":"inhibition of syringal lignin anabolism","type":"exact"},{"name":"inhibition of syringal lignin biosynthesis","type":"exact"},{"name":"inhibition of syringal lignin biosynthetic process","type":"narrow"},{"name":"inhibition of syringal lignin formation","type":"exact"},{"name":"inhibition of syringal lignin synthesis","type":"exact"},{"name":"negative regulation of S-lignin biosynthetic process","type":"exact"},{"name":"negative regulation of syringal lignin anabolism","type":"exact"},{"name":"negative regulation of syringal lignin biosynthesis","type":"exact"},{"name":"negative regulation of syringal lignin formation","type":"exact"},{"name":"negative regulation of syringal lignin synthesis","type":"exact"}],"termid":"GO:1901429"}


id: PR:O94725
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1393.13 gene.","definition_xrefs":["UniProtKB:O94725","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-glutamate O-methyltransferase C1393.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.13","synonyms":[{"name":"Spom972h-SPCC1393.13","type":"exact"}],"termid":"PR:O94725"}


id: GO:0100067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any canonical Wnt signaling pathway process that positively_regulates spinal cord association neuron differentiation.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of spinal cord association neuron differentiation by canonical Wnt signaling pathway (obsolete GO:0100067)","termid":"GO:0100067"}


id: MONDO:0016436
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acquired dermis elastic tissue disorder with increased elastic tissue (obsolete MONDO:0016436)","secondary_identifiers":["Orphanet:228224"],"termid":"MONDO:0016436","xrefs":{"Monarch":{"xref_id":"0016436"}}}


id: PBO:0067846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 148","termid":"PBO:0067846"}


id: PBO:0046935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 53 member A","termid":"PBO:0046935"}


id: PBO:0117118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 22 member 10 (gene/pseudogene)","termid":"PBO:0117118"}


id: PBO:0068780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 17, pseudogene","termid":"PBO:0068780"}


id: GO:0030820
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of the nucleotide cAMP (cyclic AMP, adenosine 3',5'-cyclophosphate).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cAMP catabolic process (obsolete GO:0030820)","synonyms":[{"name":"regulation of 3',5' cAMP catabolic process","type":"exact"},{"name":"regulation of 3',5' cAMP catabolism","type":"exact"},{"name":"regulation of 3',5'-cAMP catabolic process","type":"exact"},{"name":"regulation of 3',5'-cAMP catabolism","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate catabolic process","type":"exact"},{"name":"regulation of adenosine 3',5'-cyclophosphate catabolism","type":"exact"},{"name":"regulation of cAMP breakdown","type":"exact"},{"name":"regulation of cAMP catabolism","type":"exact"},{"name":"regulation of cAMP degradation","type":"exact"},{"name":"regulation of cyclic AMP catabolic process","type":"exact"},{"name":"regulation of cyclic AMP catabolism","type":"exact"}],"termid":"GO:0030820"}


id: PBO:0016055
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mating type Auxiliary Plus","termid":"PBO:0016055"}


id: PBO:0120353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRELD disulfide isomerase 1","termid":"PBO:0120353"}


id: PBO:0065861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB18, member RAS oncogene family","termid":"PBO:0065861"}


id: FYPO:0005820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of neddylation of one or more specific proteins, or of specific protein sites, is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein neddylation during vegetative growth","termid":"FYPO:0005819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0000002","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased protein neddylation during vegetative growth","synonyms":[{"name":"increased protein neddylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005820"}


id: PBO:0005010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orotidine 5'-phosphate decarboxylase Ura4","termid":"PBO:0005010"}


id: GO:0085006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with the host organism mediated by a substance released by the other (symbiont) organism via a symbiont-containing vacuole, a specialized sac within the host in which the symbiont resides. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with host mediated by symbiont secreted substance released from symbiont-containing vacuole (obsolete GO:0085006)","synonyms":[{"name":"interaction with host mediated by symbiont secreted substance released from parasitophorous vacuole","type":"exact"}],"termid":"GO:0085006"}


id: PBO:0052568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 5","termid":"PBO:0052568"}


id: GO:0009302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis of snoRNA class RNA (also referred to as sRNA in Archaea) from a DNA template.","definition_xrefs":["PMID:17284456","GOC:jl","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription","termid":"GO:0006351"},{"relation_name":"is_a","term_name":"sno(s)RNA metabolic process","termid":"GO:0016074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016074"},{"rel_name":"is_a","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016074","GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"sno(s)RNA transcription","synonyms":[{"name":"sRNA transcription","type":"narrow"},{"name":"snoRNA transcription","type":"narrow"}],"termid":"GO:0009302"}


id: PBO:0083975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucose-repressible alcohol dehydrogenase II; catalyzes the conversion of ethanol to acetaldehyde; involved in the production of certain carboxylate esters; regulated by ADR1","termid":"PBO:0083975"}


id: PBO:0062981
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoautosomal boundary region, X-linked","termid":"PBO:0062981"}


id: PBO:0042965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 4 pseudogene 3","termid":"PBO:0042965"}


id: MONDO:0008882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Long bone bowing is a congenital condition described by the presence of symmetric or asymmetric angular deformity and shortening of the long bones, particularly the femurs, tibiae and ulnae.","definition_xrefs":["Orphanet:2292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital deformities of limbs","termid":"MONDO:0017427"},{"relation_name":"is_a","term_name":"bent bone dysplasia","termid":"MONDO:0019698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital bowing of long bones","secondary_identifiers":["MedDRA:10054064","icd11.foundation:1261565213","OMIM:211355","UMLS:C1859394","MEDGEN:395251","GARD:953","SCTID:716098006"],"synonyms":[{"name":"bowing of long bones congenital","type":"related"},{"name":"bowing of long bones, asymmetric and symmetric","type":"related"}],"termid":"MONDO:0008882","xrefs":{"Monarch":{"xref_id":"0008882"}}}


id: MONDO:0001679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete crater-like holes of optic disk (obsolete MONDO:0001679)","secondary_identifiers":["DOID:13295","ICD9:377.22"],"synonyms":[{"name":"crater-like optic disk holes","type":"exact"}],"termid":"MONDO:0001679","xrefs":{"Monarch":{"xref_id":"0001679"}}}


id: PBO:0055428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2858","termid":"PBO:0055428"}


id: GO:0034023
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole = 5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxylate.","definition_xrefs":["EC:5.4.99.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"5-(carboxyamino)imidazole ribonucleotide mutase activity","secondary_identifiers":["RHEA:13193","MetaCyc:RXN0-743"],"synonyms":[{"name":"5-carboxyamino-1-(5-phospho-D-ribosyl)imidazole carboxymutase activity","type":"related"},{"name":"N5-CAIR mutase activity","type":"related"},{"name":"N5-carboxyaminoimidazole ribonucleotide mutase activity","type":"related"},{"name":"PurE","type":"related"},{"name":"class I PurE","type":"related"}],"termid":"GO:0034023"}


id: PBO:0036395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human MAPK organizer 1 (MORG1) family Wdr83 (predicted)","termid":"PBO:0036395"}


id: GO:0052421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of xylan in other organism involved in symbiotic interaction (obsolete GO:0052421)","synonyms":[{"name":"metabolism by organism of xylan in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052421"}


id: PBO:0080855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YEATS domain containing 4","termid":"PBO:0080855"}


id: FYPO:0001141
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A conjugation phenotype in which regulation of transcription in response to mating pheromone is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000298"],"is_obsolete":false,"name":"abolished transcriptional response to pheromone","synonyms":[{"name":"abolished regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"transcriptional response to pheromone abolished","type":"exact"}],"termid":"FYPO:0001141"}


id: PBO:0075384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SOX30 pseudogene 1","termid":"PBO:0075384"}


id: GO:0004824
data:
  {"annotated_genes":["SJAG_04409","SJAG_00488"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73755,75566],"is_not":false,"summary":null,"term":"GO:0004824"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-lysine + tRNA(Lys) = AMP + diphosphate + L-lysyl-tRNA(Lys).","definition_xrefs":["EC:6.1.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00488":null,"SJAG_04409":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0016874","GO:0140101","GO:0003674"],"is_obsolete":false,"name":"lysine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:LYSINE--TRNA-LIGASE-RXN","RHEA:20792","Reactome:R-HSA-380008","Reactome:R-HSA-380233"],"synonyms":[{"name":"L-lysine-transfer RNA ligase activity","type":"related"},{"name":"L-lysine:tRNALys ligase (AMP-forming)","type":"related"},{"name":"lysine translase activity","type":"related"},{"name":"lysine-tRNA synthetase activity","type":"related"},{"name":"lysyl-tRNA synthetase activity","type":"exact"},{"name":"lysyl-transfer RNA synthetase activity","type":"related"},{"name":"lysyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004824","terms_by_termid":{"GO:0004824":null}}


id: PBO:0113219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein; binds to the 3'UTR of cell wall-related mRNAs and destabilizes these mRNAs during stress, acting antagonistically to Nab6p; links cell wall homeostasis to mitochondrial structure and function; binds specific categories of mRNAs, including those that contain upstream open reading frames (uORFs) and internal ribosome entry sites (IRES); interacts genetically with chromatin remodelers and splicing factors, linking chromatin state, splicing and as a result mRNA maturation","termid":"PBO:0113219"}


id: PBO:0120673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding pioneer transcription factor Moc3","termid":"PBO:0120673"}


id: PBO:0055781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LONRF2 pseudogene 1","termid":"PBO:0055781"}


id: PBO:0083473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene RPM1","termid":"PBO:0083473"}


id: GO:0005315
data:
  {"annotated_genes":["SJAG_00233","SJAG_00547","SJAG_01059","SJAG_01033","SJAG_04241","SJAG_00612"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72834,74184,80810,114787,118568],"is_not":false,"summary":null,"term":"GO:0005315"},{"annotations":[104873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"}]},"cv_name":"molecular_function","definition":"Enables the transfer of phosphate ions from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"},{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00233":null,"SJAG_00547":null,"SJAG_00612":null,"SJAG_01033":null,"SJAG_01059":null,"SJAG_04241":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"phosphate transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1901677","GO:0005317"],"synonyms":[{"name":"inorganic phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0005315","terms_by_termid":{"GO:0005315":null,"GO:0140987":null}}


id: GO:0048638
data:
  {"annotated_genes":["SJAG_00514","SJAG_03581","SJAG_02392","SJAG_02169","SJAG_00244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97858,91875,96589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[92733],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051517"},{"annotations":[117108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051516"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of developmental growth.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth","termid":"GO:0040008"},{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00244":null,"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental growth","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0048638","terms_by_termid":{"GO:0051516":null,"GO:0051517":null,"GO:0051519":null}}


id: GO:0102514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cyanidin 3-O-beta-D-glucoside betaine + 1-O-feruloyl-beta-D-glucose = cyanidin 3,7-di-O-beta-D-glucoside betaine + ferulate + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete cyanidin 3-O-glucoside 7-O-glucosyltransferase (feruloyl-glucose dependent) activity (obsolete GO:0102514)","termid":"GO:0102514"}


id: MONDO:0100418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly KIT exon 17 mutation. (A molecular genetic abnormality indicating the presence of a mutation in exon 17 of the KIT gene located within 4q11-q12.)","definition_xrefs":["NCIT:C116396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia, KIT exon 17 mutation","synonyms":[{"name":"AML, CD117 Exon 17 Mutation","type":"exact"},{"name":"AML, KIT Proto-Oncogene Tyrosine Protein Kinase Gene Exon 17 Mutation","type":"exact"},{"name":"AML, KIT exon 17 mutation","type":"exact"},{"name":"AML, c-KIT Exon 17 Mutation","type":"exact"},{"name":"AML, v-Kit Hardy-Zuckerman 4 Feline Sarcoma Viral Oncogene Homolog Gene Exon 17 Mutation","type":"exact"}],"termid":"MONDO:0100418","xrefs":{"Monarch":{"xref_id":"0100418"}}}


id: MONDO:0019534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mixed autoimmune hemolytic anemia is a type of autoimmune hemolytic anemia (AIHA) defined by the presence of both warm and cold autoantibodies, which have a deleterious effect on red blood cells at either body temperature or at lower temperatures.","definition_xrefs":["Orphanet:90036"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hemolytic anemia","termid":"MONDO:0020108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0005046"],"is_obsolete":false,"name":"mixed-type autoimmune hemolytic anemia","secondary_identifiers":["SCTID:718716008","NANDO:1200309","MEDGEN:930926","UMLS:C4305257","GARD:19101","icd11.foundation:1878239449"],"synonyms":[{"name":"mixed AIHA","type":"exact"}],"termid":"MONDO:0019534","xrefs":{"Monarch":{"xref_id":"0019534"}}}


id: PBO:0028215
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_arsenate_reductase_activity","termid":"PBO:0028215"}


id: PBO:0028407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_biotin_import","termid":"PBO:0028407"}


id: MOD:00771
data:
  {"annotated_genes":["SJAG_02763","SJAG_03012","SJAG_02592"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[121658,82637,121659,121595,121596,82638,121594,121593],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00046"}]},"cv_name":"PSI-MOD","definition":"Natural or modified residues with a mass of 166.98-167.00 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02592":null,"SJAG_02763":null,"SJAG_03012":null},"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 166.98-167.00 Da","references_by_uniquename":{"PMID:26774782":null,"PMID:31150379":null,"PMID:36408920":null},"termid":"MOD:00771","terms_by_termid":{"GO:0034599":null,"GO:0034605":null,"GO:0071475":null,"GO:1904547":null,"MOD:00046":null}}


id: PBO:0043345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClpB family mitochondrial disaggregase","termid":"PBO:0043345"}


id: MONDO:0004416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating bladder urothelial carcinoma","termid":"MONDO:0003890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"plasmacytoid variant infiltrating bladder urothelial carcinoma","secondary_identifiers":["ONCOTREE:SRCBC","UMLS:C1512742","DOID:7968","NCIT:C39823","MEDGEN:268576"],"synonyms":[{"name":"infiltrating bladder urothelial carcinoma, plasmacytoid variant","type":"exact"},{"name":"plasmacytoid/signet ring cell bladder carcinoma","type":"related"}],"termid":"MONDO:0004416","xrefs":{"Monarch":{"xref_id":"0004416"}}}


id: GO:0046899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nucleoside triphosphate + AMP = nucleoside diphosphate + ADP.","definition_xrefs":["EC:2.7.4.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003824","GO:0016301","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"nucleoside triphosphate adenylate kinase activity","secondary_identifiers":["Reactome:R-HSA-1008248","RHEA:13749","MetaCyc:2.7.4.10-RXN"],"synonyms":[{"name":"GTP:AMP phosphotransferase","type":"narrow"},{"name":"guanosine triphosphate-adenylate kinase","type":"narrow"},{"name":"isozyme 3 of adenylate kinase activity","type":"related"},{"name":"nucleoside triphosphate-adenosine monophosphate transphosphorylase activity","type":"exact"},{"name":"nucleoside-triphosphate-adenylate kinase activity","type":"exact"},{"name":"nucleoside-triphosphate:AMP phosphotransferase activity","type":"related"}],"termid":"GO:0046899"}


id: GO:0032579
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A fibrous network that is part of the hyalin layer extracellular matrix. The apical lamina is thought to be principally composed of the glycoproteins fibropellins. This matrix has been found in echinoderms.","definition_xrefs":["GOC:ecd","PMID:9638331","PMID:2060714","PMID:7608987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"hyaline layer","termid":"GO:0033166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"apical lamina of hyaline layer","termid":"GO:0032579"}


id: GO:0044761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the normal execution of cholinergic synaptic transmission, communication from a neuron to a target (neuron, muscle, or secretory cell) across a synapse via the neurotransmitter choline, in its host organism.","definition_xrefs":["PMID:37157163","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host synaptic transmission","termid":"GO:0044759"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cholinergic synaptic transmission","termid":"GO:0044760"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cholinergic synaptic transmission","synonyms":[{"name":"negative regulation by symbiont of host cholinergic synaptic transmission","type":"exact"}],"termid":"GO:0044761"}


id: PBO:0024479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation inhibitor (predicted)","termid":"PBO:0024479"}


id: PBO:0058756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6880","termid":"PBO:0058756"}


id: MONDO:0004939
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A drug dependence for a hallucinogenic substance.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hallucinogen dependence","secondary_identifiers":["UMLS:C0018528","ICD10CM:F16.2","NCIT:C34657","MEDGEN:5415","ICD9:304.5","SCTID:38247002","DOID:9977","ICD9:304.50","icd11.foundation:2041952725"],"termid":"MONDO:0004939","xrefs":{"Monarch":{"xref_id":"0004939"}}}


id: GO:0140091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A muscle cell-specific SWI/SNF-type complex that contains eight to fourteen proteins, including both conserved (core) and nonconserved components; contains the ATPase product of either the SMARCA4/BAF190A/BRG1 gene, the mammalian ortholog of the yeast SNF2 gene, or the SMARCA2/BAF190B/BRM gene, the mammalian ortholog of the Drosophila brm (brahma) gene, or an ortholog of either of these genes, and the muscle-specific product of the DPF3/BAF45C gene or an ortholog thereof.","definition_xrefs":["PMID:8804307","GO:bhm","PMID:11175787","PMID:8895581","PMID:12620226","PMID:15525990"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SWI/SNF superfamily-type complex","termid":"GO:0070603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"mBAF complex","synonyms":[{"name":"muscle-specific BAF complex","type":"exact"},{"name":"muscle-specific SWI/SNF complex","type":"exact"},{"name":"muscle-type BAF complex","type":"exact"},{"name":"muscle-type SWI/SNF complex","type":"exact"}],"termid":"GO:0140091"}


id: MONDO:0850471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that is categorized as N1 with high probability by the LymphGen algorithm. This is based on a combination of genetic features. Although N1 DLBCLs always have an activating mutation affecting NOTCH1, LymphGen can assign cases with this mutation to other classes, depending on the presence of other genetic features.","definition_xrefs":["DOID:0081067"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"N1 diffuse large B-cell lymphoma","secondary_identifiers":["NCIT:C148396","UMLS:C4725004","MEDGEN:1650336"],"termid":"MONDO:0850471","xrefs":{"Monarch":{"xref_id":"0850471"}}}


id: PBO:0054549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1949","termid":"PBO:0054549"}


id: PBO:0050849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intercellular adhesion molecule 2","termid":"PBO:0050849"}


id: MONDO:0006528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacteria-induced exanthem","definition_xrefs":["EFO:1000671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exanthem","termid":"MONDO:0006547"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"bacterial exanthem","secondary_identifiers":["DOID:0050487"],"termid":"MONDO:0006528","xrefs":{"Monarch":{"xref_id":"0006528"}}}


id: PBO:0061114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLR family pyrin domain containing 5","termid":"PBO:0061114"}


id: MONDO:0013621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"LAMB2-related infantile-onset nephrotic syndrome is a rare primary glomerular disease due to homozygous mutations in LAMB2 gene, characterized by prenatal or early-onset progressive steroid-resistant nephrotic syndrome leading to renal failure, and variable ocular defects including myopia, fundus abnormalities, strabismus or nystagmus, without severe visual impairment or blindness. Patients present in early infancy with massive proteinuria, edema, hypertension, and hyperlipidemia. Psychomotor development is normal.","definition_xrefs":["Orphanet:306507"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"LAMB2-related infantile-onset nephrotic syndrome","secondary_identifiers":["OMIM:614199","MEDGEN:481743","OMIM:249660","MESH:C565405","DOID:0080380","UMLS:C3280113"],"synonyms":[{"name":"NPHS5","type":"related"},{"name":"mesangial sclerosis, diffuse renal, with ocular abnormalities","type":"exact"},{"name":"nephrotic syndrome, type 5, with or without ocular abnormalities","type":"related"}],"termid":"MONDO:0013621","xrefs":{"Monarch":{"xref_id":"0013621"}}}


id: MONDO:1011552
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Legg-Calvé-Perthes disease that occurs in lesser panda.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Legg-Calvé-Perthes disease, non-human animal","termid":"MONDO:1011453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calvé-Perthes disease, lesser panda","secondary_identifiers":["OMIA:000586-9649"],"termid":"MONDO:1011552","xrefs":{"Monarch":{"xref_id":"1011552"}}}


id: GO:0001640
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with glutamate and transmitting the signal across the membrane by activating the alpha-subunit of an associated heterotrimeric G-protein complex to inhibit downstream adenylate cyclase activity.","definition_xrefs":["GOC:dph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor activity","termid":"GO:0098988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","synonyms":[{"name":"adenylate cyclase inhibiting metabotropic glutamate receptor activity","type":"related"},{"name":"adenylyl cyclase inhibiting metabotropic glutamate receptor activity","type":"exact"}],"termid":"GO:0001640"}


id: PBO:0003542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bis(5'-adenosyl)-triphosphatase (predicted)","termid":"PBO:0003542"}


id: PBO:0067903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 205","termid":"PBO:0067903"}


id: GO:0031862
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a prostanoid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"prostanoid receptor binding","synonyms":[{"name":"prostanoid receptor ligand","type":"narrow"}],"termid":"GO:0031862"}


id: FYPO:0002836
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which small interfering RNA transcripts derived from the centromere outer repeat region are present at greater levels than normal.","definition_xrefs":["PomBase:mah","PMID:20211136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric outer repeat transcript level","termid":"FYPO:0000220"},{"relation_name":"is_a","term_name":"increased siRNA level","termid":"FYPO:0004207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0001985"],"is_obsolete":false,"name":"increased centromeric outer repeat transcript-derived siRNA level","synonyms":[{"name":"increased accumulation of centromeric outer repeat transcript-derived siRNA","type":"exact"},{"name":"increased accumulation of siRNAs homologous to outer repeats","type":"related"},{"name":"increased centromere outer repeat transcript-derived siRNA level","type":"exact"},{"name":"increased centromeric outer repeat transcript-derived siRNA level during mitotic cell cycle","type":"related"},{"name":"increased centromeric outer repeat transcript-derived siRNA level during vegetative growth","type":"exact"},{"name":"increased level of centromeric outer repeat transcript-derived siRNA","type":"exact"},{"name":"increased level of siRNAs homologous to outer repeats","type":"exact"}],"termid":"FYPO:0002836"}


id: MONDO:0007406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"cryofibrinogenemia","termid":"MONDO:0022904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cryofibrinogenemia, familial primary","secondary_identifiers":["MESH:C565142","OMIM:123540","UMLS:C1852457","MEDGEN:377679"],"synonyms":[{"name":"cryofibrinogenemia, familial primary","type":"exact"}],"termid":"MONDO:0007406","xrefs":{"Monarch":{"xref_id":"0007406"}}}


id: GO:0072531
data:
  {"annotated_genes":["SJAG_04673","SJAG_03652","SJAG_04714","SJAG_00835","SJAG_03970","SJAG_04717","SJAG_00154","SJAG_02962"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[90098],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905530"},{"annotations":[90444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904082"},{"annotations":[81134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"},{"annotations":[102698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[92152,92153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"},{"annotations":[97550],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098721"}]},"cv_name":"biological_process","definition":"The process in which a pyrimidine-containing compound is transported across a membrane. A pyrimidine-containing compound is any compound that contains pyrimidine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00835":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03970":null,"SJAG_04673":null,"SJAG_04714":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"pyrimidine-containing compound transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"pyrimidine-containing compound membrane transport","type":"exact"}],"termid":"GO:0072531","terms_by_termid":{"GO:0071934":null,"GO:0098721":null,"GO:0140125":null,"GO:1904082":null,"GO:1905530":null,"GO:1990519":null,"GO:1990545":null}}


id: FYPO:0008275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a polyphosphatase activity is normal (i.e. indistinguishable from wild type).","direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal polyphosphatase activity","termid":"FYPO:0008275"}


id: MONDO:0009475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isovaleric acidemia (IVA) is an autosomal recessively inherited organic aciduria characterized by a deficiency in isovaleryl-CoA dehydrogenase, that has wide clinical variability and that can present in infancy with acute manifestations of vomiting, failure to thrive, seizures, lethargy, a characteristic ''sweaty feet'' odor, acute pancreatitis and mild to severe developmental delay or in childhood with metabolic acidosis (brought on by prolonged fasting, an increased intake of protein-rich food or infections) and that can be fatal if not treated immediately. Chronic intermittent presentations and asymptomatic patients have also been reported.","definition_xrefs":["Orphanet:33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic organic aciduria","termid":"MONDO:0019215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"isovaleric acidemia","secondary_identifiers":["UMLS:C0268575","DOID:14753","GARD:465","ICD10CM:E71.110","MEDGEN:82822","MESH:C538167","NANDO:1200798","NCIT:C98964","OMIM:243500","NORD:712","NANDO:2200494","SCTID:87827003"],"synonyms":[{"name":"IVA","type":"related"},{"name":"IVD deficiency","type":"related"},{"name":"Isovalericacidemia","type":"exact"},{"name":"isovaleric acid CoA dehydrogenase deficiency","type":"exact"},{"name":"isovaleric acid Coa dehydrogenase deficiency","type":"related"},{"name":"isovaleric acidemia","type":"exact"},{"name":"isovaleric aciduria","type":"exact"},{"name":"isovaleryl CoA carboxylase deficiency","type":"related"},{"name":"isovaleryl-CoA dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0009475","xrefs":{"Monarch":{"xref_id":"0009475"}}}


id: PBO:0071127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 129","termid":"PBO:0071127"}


id: PBO:0072115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S14 pseudogene 4","termid":"PBO:0072115"}


id: GO:0043053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Entry into the facultative diapause of the dauer (enduring) larval stage of nematode development.","definition_xrefs":["PMID:10077613","GOC:cab1","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry into diapause","termid":"GO:0055115"},{"relation_name":"part_of","term_name":"dauer larval development","termid":"GO:0040024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dauer entry","synonyms":[{"name":"nematode entry into dormancy","type":"exact"}],"termid":"GO:0043053"}


id: FYECO:0000082
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which arginine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ arginine","termid":"FYECO:0000082"}


id: MONDO:0054708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"},{"relation_name":"is_a","term_name":"retinal ciliopathy","termid":"MONDO:0022410"},{"relation_name":"is_a","term_name":"IFT140-related recessive ciliopathy","termid":"MONDO:0100509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"retinitis pigmentosa 80","secondary_identifiers":["UMLS:C4540439","DOID:0061111","GARD:16252","MEDGEN:1619674","OMIM:617781"],"synonyms":[{"name":"RETINITIS pigmentosa 80","type":"related"},{"name":"RP80","type":"related"}],"termid":"MONDO:0054708","xrefs":{"Monarch":{"xref_id":"0054708"}}}


id: PBO:0110052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial RNA-binding protein Yme2","termid":"PBO:0110052"}


id: PBO:0059053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neuron and pancreas homeobox 1","termid":"PBO:0059053"}


id: PBO:0061117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NLRP7 pseudogene 1","termid":"PBO:0061117"}


id: GO:2000661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-1-mediated signaling pathway.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-1-mediated signaling pathway","termid":"GO:2000659"},{"relation_name":"positively_regulates","term_name":"interleukin-1-mediated signaling pathway","termid":"GO:0070498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-1-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-1 alpha-mediated signaling pathway","type":"related"},{"name":"positive regulation of IL-1 beta-mediated signaling pathway","type":"related"},{"name":"positive regulation of IL-1-mediated signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-1 alpha-mediated signaling pathway","type":"related"},{"name":"positive regulation of interleukin-1 beta-mediated signaling pathway","type":"related"},{"name":"positive regulation of interleukin-1-mediated signalling pathway","type":"exact"}],"termid":"GO:2000661"}


id: FYPO:0008366
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the duration of heterochromatin maintenance is shorter than normal.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal heterochromatin organization during vegetative growth","termid":"FYPO:0004543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000641","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased duration of heterochromatin maintenance","termid":"FYPO:0008366"}


id: GO:0055022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cardiac muscle growth.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"},{"relation_name":"is_a","term_name":"negative regulation of heart growth","termid":"GO:0061117"},{"relation_name":"negatively_regulates","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cardiac muscle tissue growth","synonyms":[{"name":"down regulation of cardiac muscle growth","type":"exact"},{"name":"down-regulation of cardiac muscle growth","type":"exact"},{"name":"downregulation of cardiac muscle growth","type":"exact"},{"name":"inhibition of cardiac muscle growth","type":"narrow"},{"name":"negative regulation of heart muscle growth","type":"related"}],"termid":"GO:0055022"}


id: PBO:0090733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"telomerase regulatory factor Ctr1","termid":"PBO:0090733"}


id: GO:0018739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoyl-CoA + H2O = 4-hydroxybenzoate + CoA + H+.","definition_xrefs":["RHEA:11948","EC:3.1.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"4-hydroxybenzoyl-CoA thioesterase activity","secondary_identifiers":["KEGG_REACTION:R01301","UM-BBD_reactionID:r0141","MetaCyc:3.1.2.23-RXN"],"synonyms":[{"name":"4-hydroxybenzoyl-CoA hydrolase activity","type":"related"},{"name":"4-hydroxybenzoyl-CoA thiolesterase activity","type":"exact"}],"termid":"GO:0018739"}


id: PBO:0080327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 91 pseudogene","termid":"PBO:0080327"}


id: GO:0050985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The sulfation of peptidyl-threonine to form peptidyl-O-sulfo-L-threonine.","definition_xrefs":["RESID:AA0362"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-threonine sulfation (obsolete GO:0050985)","termid":"GO:0050985"}


id: PBO:0082769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Sorting and Assembly Machinery (SAM) complex; the SAM (or TOB) complex is located in the mitochondrial outer membrane; the complex binds precursors of beta-barrel proteins and facilitates their outer membrane insertion; homologous to bacterial Omp85","termid":"PBO:0082769"}


id: GO:1900408
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to oxidative stress.","definition_xrefs":["GOC:mah","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidative stress","termid":"GO:1900407"},{"relation_name":"is_a","term_name":"negative regulation of response to oxidative stress","termid":"GO:1902883"},{"relation_name":"negatively_regulates","term_name":"cellular response to oxidative stress","termid":"GO:0034599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to oxidative stress","synonyms":[{"name":"down regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"down regulation of cellular response to oxidative stress","type":"exact"},{"name":"down-regulation of adaptive response to oxidative stress","type":"narrow"},{"name":"down-regulation of cellular response to oxidative stress","type":"exact"},{"name":"downregulation of adaptive response to oxidative stress","type":"narrow"},{"name":"downregulation of cellular response to oxidative stress","type":"exact"},{"name":"inhibition of adaptive response to oxidative stress","type":"narrow"},{"name":"inhibition of cellular response to oxidative stress","type":"narrow"},{"name":"negative regulation of adaptive response to oxidative stress","type":"narrow"}],"termid":"GO:1900408"}


id: PBO:0040218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase family AAA domain containing 3C","termid":"PBO:0040218"}


id: GO:0005354
data:
  {"annotated_genes":["SJAG_00057"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112700],"is_not":false,"summary":null,"term":"GO:0005354"}]},"cv_name":"molecular_function","definition":"Enables the transfer of galactose from one side of a membrane to the other. D-galactose is widely distributed in combined form in plants, animals and microorganisms as a constituent of oligo- and polysaccharides; it also occurs in galactolipids and as its glucoside in lactose and melibiose.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose transmembrane transporter activity","termid":"GO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00057":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"galactose transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"galactose/glucose (methylgalactoside) porter activity","type":"related"}],"termid":"GO:0005354","terms_by_termid":{"GO:0005354":null}}


id: PBO:0076566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3G","termid":"PBO:0076566"}


id: _global:evidence_for_feature
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"B is evidence_for_feature A, if an instance of B supports the existence of A.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"evidence_for_feature","termid":"_global:evidence_for_feature"}


id: PATO:0001294
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A scalar EM radiation quality which obtains by the capacity of the bearer to scatter or reflect radiation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"full-spectrum EM radiation quality","termid":"PATO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiation reflective quality","termid":"PATO:0001294"}


id: PBO:0036441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ino80 complex actin-like protein Arp5","termid":"PBO:0036441"}


id: GO:0009187
data:
  {"annotated_genes":["SJAG_02481"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006198"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02481":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"cyclic nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cyclic nucleotide metabolism","type":"exact"}],"termid":"GO:0009187","terms_by_termid":{"GO:0006198":null}}


id: FYPO:0004668
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome segregation begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"premature homologous chromosome segregation","synonyms":[{"name":"advanced homologous chromosome segregation","type":"exact"},{"name":"premature chromosome segregation during meiosis I","type":"exact"}],"termid":"FYPO:0004668"}


id: PBO:0066842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 142","termid":"PBO:0066842"}


id: GO:0047696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [beta-adrenergic receptor] + ATP = [beta-adrenergic receptor]-phosphate + ADP + H+.","definition_xrefs":["RHEA:19429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0016740","GO:0004672","GO:0003824","GO:0140096"],"is_obsolete":false,"name":"beta-adrenergic receptor kinase activity","secondary_identifiers":["Reactome:R-HSA-8851797","MetaCyc:2.7.11.15-RXN","EC:2.7.11.15","Reactome:R-HSA-8866268"],"synonyms":[{"name":"ADRBK1","type":"related"},{"name":"ATP:beta-adrenergic-receptor phosphotransferase activity","type":"broad"},{"name":"BARK1","type":"related"},{"name":"GRK2","type":"related"},{"name":"GRK3","type":"related"},{"name":"STK15","type":"related"},{"name":"[b-adrenergic-receptor] kinase activity","type":"related"},{"name":"adrenergic receptor kinase activity","type":"broad"},{"name":"beta-AR kinase activity","type":"related"},{"name":"beta-ARK","type":"related"},{"name":"beta-ARK 1","type":"related"},{"name":"beta-ARK 2","type":"related"},{"name":"beta-adrenergic receptor-specific kinase activity","type":"related"},{"name":"beta-adrenergic-receptor kinase (phosphorylating) activity","type":"related"},{"name":"beta-adrenergic-receptor kinase activity","type":"related"},{"name":"beta-adrenoceptor kinase 1 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase 2 activity","type":"narrow"},{"name":"beta-adrenoceptor kinase activity","type":"related"},{"name":"beta-receptor kinase activity","type":"related"},{"name":"beta2ARK","type":"related"},{"name":"betaARK1","type":"related"}],"termid":"GO:0047696"}


id: PR:O43090
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADH dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH-ubiquinone oxidoreductase C947.15c, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC947.15c","secondary_identifiers":["UniProtKB:O43090"],"synonyms":[{"name":"Spom972h-ndh","type":"exact"}],"termid":"PR:O43090"}


id: PBO:0049087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 142","termid":"PBO:0049087"}


id: MONDO:0012877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bipolar disorder","termid":"MONDO:0004985"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major affective disorder 8","secondary_identifiers":["MESH:C567530","MEDGEN:397794","OMIM:612357","UMLS:C2700439"],"synonyms":[{"name":"MAFD8","type":"exact"},{"name":"MAJOR affective disorder 8","type":"related"},{"name":"bipolar affective disorder","type":"related"},{"name":"major affective disorder 8","type":"exact"},{"name":"major affective disorder-8, susceptibility to","type":"exact"}],"termid":"MONDO:0012877","xrefs":{"Monarch":{"xref_id":"0012877"}}}


id: GO:1904766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A TORC1 signaling that results in negative regulation of macroautophagy.","definition_xrefs":["GOC:autophagy","GOC:dph","GOC:TermGenie","GO_REF:0000063","PMID:23602450"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of macroautophagy by TORC1 signaling (obsolete GO:1904766)","synonyms":[{"name":"negative regulation of autophagy in response to cellular starvation by TORC1 signal transduction","type":"exact"},{"name":"negative regulation of autophagy in response to cellular starvation by TORC1 signaling","type":"exact"},{"name":"negative regulation of macroautophagy by TORC1 signal transduction","type":"exact"},{"name":"negative regulation of non-specific autophagy by TORC1 signal transduction","type":"exact"},{"name":"negative regulation of non-specific autophagy by TORC1 signaling","type":"exact"},{"name":"negative regulation of starvation-induced autophagy by TORC1 signal transduction","type":"exact"},{"name":"negative regulation of starvation-induced autophagy by TORC1 signaling","type":"exact"}],"termid":"GO:1904766"}


id: PATO:0000627
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial pattern quality inhering in a bearer by virtue of the bearer's being confined or restricted to a particular location.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localized","synonyms":[{"name":"focal","type":"exact"},{"name":"localised","type":"exact"}],"termid":"PATO:0000627"}


id: GO:0008332
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by a low voltage-gated channel. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:mtg_transport","PMID:16382099","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"low voltage-gated calcium channel activity","synonyms":[{"name":"T-type calcium channel","type":"related"},{"name":"low voltage gated calcium channel activity","type":"exact"},{"name":"low voltage-dependent calcium channel activity","type":"exact"}],"termid":"GO:0008332"}


id: PBO:0080092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 54","termid":"PBO:0080092"}


id: PBO:0086174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for the maintenance of bud site selection; localizes; localization to the bud neck and previous sites of cell division (bud scars; cytokinesis remnants (CRMs)) is interdependent with Rax2p; required with Rax1p to anchor both Nba1p and Nis1p to CRMs where a Cdc42p inhibitory zone is established preventing repolarization of cells at previous division sites; RAX2 mRNA stability is regulated by Mpt5p; predicted type I membrane-spanning protein; N-glycosylated","termid":"PBO:0086174"}


id: PR:Q9UUI5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein transport protein Sec24A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.08","secondary_identifiers":["UniProtKB:Q9UUI5"],"synonyms":[{"name":"Spom972h-SEC24A","type":"exact"}],"termid":"PR:Q9UUI5"}


id: MONDO:0008683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"Wilms tumor 3","secondary_identifiers":["GARD:15125","MEDGEN:349770","MESH:C565991","OMIM:194090","UMLS:C1860265"],"synonyms":[{"name":"WT3","type":"related"},{"name":"Wilms tumor 3","type":"exact"},{"name":"Wilms tumor, type 3","type":"exact"}],"termid":"MONDO:0008683","xrefs":{"Monarch":{"xref_id":"0008683"}}}


id: PBO:0047604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile histidine triad diadenosine triphosphatase","termid":"PBO:0047604"}


id: PBO:0044846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 131A","termid":"PBO:0044846"}


id: PBO:0006213
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"allele","termid":"PBO:0006213"}


id: SO:0002303
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulon defined by considering the units of expression regulated by a specified set of regulatory gene products.","definition_xrefs":["PMID:32665585","Bacterial_regulation_working_group:CMA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulon","termid":"SO:1001284"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complex_regulon","synonyms":[{"name":"simple regulon","type":"exact"}],"termid":"SO:0002303"}


id: PBO:0070653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 24","termid":"PBO:0070653"}


id: PBO:0073199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEM1 pseudogene 1","termid":"PBO:0073199"}


id: MONDO:0002291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granular cell tumor that involves the zone of skin.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis tumor","termid":"MONDO:0002300"},{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous granular cell tumor","secondary_identifiers":["UMLS:C0346060","ICD9:215.9","MEDGEN:138035","DOID:2410","NCIT:C5617","SCTID:254763007"],"synonyms":[{"name":"cutaneous granular cell neoplasm","type":"exact"},{"name":"cutaneous granular cell tumor","type":"exact"},{"name":"granular cell neoplasm of skin","type":"exact"},{"name":"granular cell neoplasm of the skin","type":"exact"},{"name":"granular cell skin tumor","type":"exact"},{"name":"granular cell skin tumour","type":"exact"},{"name":"granular cell tumor of skin","type":"exact"},{"name":"granular cell tumor of the skin","type":"exact"},{"name":"granular cell tumor of zone of skin","type":"exact"},{"name":"granular cell tumour of skin","type":"exact"},{"name":"granular cell tumour of the skin","type":"exact"},{"name":"granular cell tumour of zone of skin","type":"exact"},{"name":"skin granular cell neoplasm","type":"exact"},{"name":"skin granular cell tumor","type":"related"},{"name":"skin granular cell tumour","type":"related"},{"name":"zone of skin granular cell tumor","type":"exact"},{"name":"zone of skin granular cell tumour","type":"exact"}],"termid":"MONDO:0002291","xrefs":{"Monarch":{"xref_id":"0002291"}}}


id: PBO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSD17B3 antisense RNA 1","termid":"PBO:0050611"}


id: GO:0060007
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vestibular reflex by which a response to a linear acceleration stimulus begins with an afferent nerve impulse from a receptor in the otolith and ends with the compensatory action of eye muscles. Signaling never reaches a level of consciousness.","definition_xrefs":["PMID:11784757","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vestibular reflex","termid":"GO:0060005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"linear vestibuloocular reflex","termid":"GO:0060007"}


id: PBO:0064822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory subunit 3D","termid":"PBO:0064822"}


id: MOD:01338
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-ethyl-L-lysine.","definition_xrefs":["PubMed:9629898","Unimod:280#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"ethylated residue","termid":"MOD:01339"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-ethyl-L-lysine","synonyms":[{"name":"Ethyl","type":"related"},{"name":"Ethylation","type":"related"}],"termid":"MOD:01338"}


id: PBO:0070200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 125 pseudogene","termid":"PBO:0070200"}


id: PBO:0073804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 6 member 10, pseudogene","termid":"PBO:0073804"}


id: GO:0000284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:elh"],"gene_count":0,"genotype_count":0,"name":"obsolete shmoo orientation (obsolete GO:0000284)","synonyms":[{"name":"shmoo orientation","type":"exact"}],"termid":"GO:0000284"}


id: SO:0001492
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory region that is part of an intron.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcriptional_cis_regulatory_region","termid":"SO:0001055"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_regulatory_region","synonyms":[{"name":"intronic regulatory region","type":"exact"}],"termid":"SO:0001492"}


id: GO:0033011
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A condensed cytoplasmic structure that covers the nucleus of mammalian spermatozoa except for a narrow zone around the insertion of the tail. It shows two distinct regions, a subacrosomal layer and, continuing caudally beyond the acrosomic system, the postacrosomal sheath. The perinuclear theca has been considered a cytoskeletal scaffold responsible for maintaining the overall architecture of the mature sperm head; however, recent studies indicate that the bulk of its constituent proteins are not traditional cytoskeletal proteins but rather a variety of cytosolic proteins.","definition_xrefs":["PMID:17289678","PMID:8025156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton","termid":"GO:0005856"},{"relation_name":"part_of","term_name":"perinuclear region of cytoplasm","termid":"GO:0048471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"perinuclear theca","termid":"GO:0033011"}


id: FYPO:0004136
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in telomeric regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation at telomere during vegetative growth","termid":"FYPO:0002820"},{"relation_name":"is_a","term_name":"abolished histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0007886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0002494"],"is_obsolete":false,"name":"abolished histone H3-K9 dimethylation at telomere during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 dimethylation at telomere during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 dimethylation at telomeric region during vegetative growth","type":"exact"},{"name":"abolished histone H3K9me2 at telomere during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 dimethylation at telomere during vegetative growth","type":"exact"},{"name":"abolished telomeric histone H3-K9 dimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation abolished at telomere during vegetative growth","type":"exact"},{"name":"histone H3-K9 dimethylation absent at telomere during vegetative growth","type":"exact"}],"termid":"FYPO:0004136"}


id: PBO:0034234
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_end_sequence_of","termid":"PBO:0034234"}


id: PBO:0050499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B9","termid":"PBO:0050499"}


id: GO:0031258
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a lamellipodium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection membrane","termid":"GO:0031253"},{"relation_name":"is_a","term_name":"leading edge membrane","termid":"GO:0031256"},{"relation_name":"part_of","term_name":"lamellipodium","termid":"GO:0030027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"lamellipodium membrane","termid":"GO:0031258"}


id: PBO:0061081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK2 homeobox 1","termid":"PBO:0061081"}


id: PBO:0043416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic nucleotide binding domain containing 2","termid":"PBO:0043416"}


id: GO:0102134
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (22S)-22-hydroxycampesterol + NADPH + O2 = (22R,23R)-22,23-dihydroxycampesterol + NADP + H2O.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"(22S)-22-hydroxy-campesterol C-23 hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11529"],"termid":"GO:0102134"}


id: PBO:0042836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP20DC divergent transcript","termid":"PBO:0042836"}


id: SO:0005845
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An exon that is the only exon in a gene.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exon","termid":"SO:0000147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exon_of_single_exon_gene","synonyms":[{"name":"exon of single exon gene","type":"exact"},{"name":"single_exon","type":"related"},{"name":"singleton exon","type":"exact"}],"termid":"SO:0005845"}


id: PBO:0052084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kazrin, periplakin interacting protein","termid":"PBO:0052084"}


id: PBO:0087532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of Nucleotide Excision Repair Factor 1 (NEF1); recognizes and binds damaged DNA during nucleotide excision repair (NER); also involved in regulation of transcription; contains zinc finger motif; homolog of human XPA protein","termid":"PBO:0087532"}


id: PBO:0116395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene, mug2/mug135/meu2 family","termid":"PBO:0116395"}


id: PBO:0049132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPRIN family member 3","termid":"PBO:0049132"}


id: PBO:0073204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"semaphorin 3D","termid":"PBO:0073204"}


id: PBO:0031449
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_pre-replicative_complex_assembly","termid":"PBO:0031449"}


id: GO:0002897
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of central B cell tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of central tolerance induction","termid":"GO:0002648"},{"relation_name":"is_a","term_name":"positive regulation of B cell tolerance induction","termid":"GO:0002663"},{"relation_name":"is_a","term_name":"regulation of central B cell tolerance induction","termid":"GO:0002895"},{"relation_name":"positively_regulates","term_name":"central B cell tolerance induction","termid":"GO:0002510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of central B cell tolerance induction","synonyms":[{"name":"activation of central B cell tolerance induction","type":"narrow"},{"name":"stimulation of central B cell tolerance induction","type":"narrow"},{"name":"up regulation of central B cell tolerance induction","type":"exact"},{"name":"up-regulation of central B cell tolerance induction","type":"exact"},{"name":"upregulation of central B cell tolerance induction","type":"exact"}],"termid":"GO:0002897"}


id: PBO:0030970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere_inner_repeat","termid":"PBO:0030970"}


id: PBO:0080189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor B","termid":"PBO:0080189"}


id: MONDO:0957279
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auditory neuropathy, autosomal dominant 2","secondary_identifiers":["OMIM:620384","UMLS:C5830542","MEDGEN:1841178"],"termid":"MONDO:0957279","xrefs":{"Monarch":{"xref_id":"0957279"}}}


id: GO:1902959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process.","definition_xrefs":["PMID:24577224","GOC:sjp","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolic process (obsolete GO:1902959)","synonyms":[{"name":"regulation of aspartate protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartate protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartic-type endopeptidase activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of aspartyl protease activity involved in amyloid precursor protein degradation","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in APP catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein breakdown","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolic process","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein catabolism","type":"exact"},{"name":"regulation of carboxyl protease activity involved in amyloid precursor protein degradation","type":"exact"}],"termid":"GO:1902959"}


id: GO:0099581
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ATPase coupled ion transmembrane transporter activity, occurring in the postsynaptic membrane, that is involved in regulation of postsynaptic membrane potential.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled ion transmembrane transporter activity","termid":"GO:0042625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of postsynaptic membrane potential","synonyms":[{"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of post-synaptic membrane potential","type":"exact"},{"name":"ATPase-coupled ion transmembrane transporter activity involved in regulation of postsynaptic membrane potential","type":"exact"}],"termid":"GO:0099581"}


id: GO:0046714
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to borate, the anion (BO3)3-.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"borate binding","synonyms":[{"name":"boron binding","type":"related"}],"termid":"GO:0046714"}


id: PBO:0109625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 79 (pseudogene)","termid":"PBO:0109625"}


id: GO:0045822
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of heart contraction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"negative regulation of blood circulation","termid":"GO:1903523"},{"relation_name":"negatively_regulates","term_name":"heart contraction","termid":"GO:0060047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of heart contraction","synonyms":[{"name":"down regulation of heart contraction","type":"exact"},{"name":"down-regulation of heart contraction","type":"exact"},{"name":"downregulation of heart contraction","type":"exact"},{"name":"inhibition of heart contraction","type":"narrow"},{"name":"negative regulation of cardiac contraction","type":"related"}],"termid":"GO:0045822"}


id: PBO:0074814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 15A","termid":"PBO:0074814"}


id: FYPO:0002928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which polyadenylated RNA molecules have poly(A) tails of normal (i.e. indistinguishable from wild type) length.","definition_xrefs":["PomBase:mah","PMID:24081329"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal poly(A) tail length","synonyms":[{"name":"normal polyA sequence length","type":"exact"},{"name":"normal polyA tail length","type":"exact"}],"termid":"FYPO:0002928"}


id: PBO:0040476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin 1","termid":"PBO:0040476"}


id: MONDO:0019910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 2 is an uniparental disomy of maternal origin that most likely does not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only mother is a carrier.","definition_xrefs":["Orphanet:96179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 2 disorder","termid":"MONDO:0700009"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 2","secondary_identifiers":["SCTID:766237006","UMLS:C4707718","icd11.foundation:2067230711","GARD:19331","MEDGEN:1631626"],"synonyms":[{"name":"UPD(2)mat","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 2","type":"exact"}],"termid":"MONDO:0019910","xrefs":{"Monarch":{"xref_id":"0019910"}}}


id: PBO:0111912
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTLH domain","termid":"PBO:0111912"}


id: PBO:0034188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-visits","termid":"PBO:0034188"}


id: GO:0035643
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with L-DOPA to initiate a change in cell activity. L-DOPA is the modified amino acid (2S)-2-amino-3-(3,4-dihydroxyphenyl) propanoic acid, and is the precursor to dopamine, norepinephrine (noradrenaline) and epinephrine.","definition_xrefs":["PMID:18828673","Wikipedia:L-DOPA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"L-DOPA receptor activity","synonyms":[{"name":"L-beta-(3,4-Dihydroxyphenyl)alanine receptor activity","type":"exact"}],"termid":"GO:0035643"}


id: PBO:0079733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBTF like 10 (pseudogene)","termid":"PBO:0079733"}


id: MONDO:0015112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of pancreas disease that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare pancreatic disease (obsolete MONDO:0015112)","secondary_identifiers":["Orphanet:101937"],"synonyms":[{"name":"rare pancreas disease","type":"exact"}],"termid":"MONDO:0015112","xrefs":{"Monarch":{"xref_id":"0015112"}}}


id: FYPO:0004237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin at centromere outer repeat regions of a chromosome is decreased.","definition_xrefs":["PMID:20299449","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during vegetative growth","termid":"FYPO:0001131"},{"relation_name":"is_a","term_name":"increased protein localization to centromere outer repeat","termid":"FYPO:0003009"},{"relation_name":"is_a","term_name":"increased protein localization to pericentric heterochromatin during vegetative growth","termid":"FYPO:0004380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased protein localization to heterochromatin at centromere outer repeat","synonyms":[{"name":"increased protein localisation to heterochromatin at centromere otr","type":"exact"},{"name":"increased protein localisation to heterochromatin at centromere outer repeat","type":"exact"},{"name":"increased protein localisation to heterochromatin at centromeric outer repeat region","type":"exact"},{"name":"increased protein localisation to heterochromatin at pericentric region","type":"related"},{"name":"increased protein localisation to heterochromatin at pericentromeric region","type":"related"},{"name":"increased protein localization to heterochromatin at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to heterochromatin at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0004237"}


id: GO:1900668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endocrocin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of endocrocin biosynthetic process","termid":"GO:1900667"},{"relation_name":"negatively_regulates","term_name":"endocrocin biosynthetic process","termid":"GO:1900602"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of endocrocin biosynthetic process","synonyms":[{"name":"down regulation of endocrocin anabolism","type":"exact"},{"name":"down regulation of endocrocin biosynthesis","type":"exact"},{"name":"down regulation of endocrocin biosynthetic process","type":"exact"},{"name":"down regulation of endocrocin formation","type":"exact"},{"name":"down regulation of endocrocin synthesis","type":"exact"},{"name":"down-regulation of endocrocin anabolism","type":"exact"},{"name":"down-regulation of endocrocin biosynthesis","type":"exact"},{"name":"down-regulation of endocrocin biosynthetic process","type":"exact"},{"name":"down-regulation of endocrocin formation","type":"exact"},{"name":"down-regulation of endocrocin synthesis","type":"exact"},{"name":"downregulation of endocrocin anabolism","type":"exact"},{"name":"downregulation of endocrocin biosynthesis","type":"exact"},{"name":"downregulation of endocrocin biosynthetic process","type":"exact"},{"name":"downregulation of endocrocin formation","type":"exact"},{"name":"downregulation of endocrocin synthesis","type":"exact"},{"name":"inhibition of endocrocin anabolism","type":"exact"},{"name":"inhibition of endocrocin biosynthesis","type":"exact"},{"name":"inhibition of endocrocin biosynthetic process","type":"narrow"},{"name":"inhibition of endocrocin formation","type":"exact"},{"name":"inhibition of endocrocin synthesis","type":"exact"},{"name":"negative regulation of endocrocin anabolism","type":"exact"},{"name":"negative regulation of endocrocin biosynthesis","type":"exact"},{"name":"negative regulation of endocrocin formation","type":"exact"},{"name":"negative regulation of endocrocin synthesis","type":"exact"}],"termid":"GO:1900668"}


id: MONDO:0012522
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any transient neonatal diabetes mellitus in which the cause of the disease is a mutation in the KCNJ11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transient neonatal diabetes mellitus","termid":"MONDO:0020525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005015","MONDO:0005066","MONDO:0004335"],"is_obsolete":false,"name":"diabetes mellitus, transient neonatal, 3","secondary_identifiers":["MEDGEN:351177","SCTID:609581006","GARD:15490","OMIM:610582","MESH:C566432","UMLS:C1864623"],"synonyms":[{"name":"KCNJ11 transient neonatal diabetes mellitus (disease)","type":"exact"},{"name":"Tndm3","type":"related"},{"name":"diabetes mellitus, transient neonatal 3","type":"exact"},{"name":"diabetes mellitus, transient neonatal, 3","type":"exact"},{"name":"diabetes mellitus, transient neonatal, type 3","type":"exact"},{"name":"diabetes mellitus, type II, autosomal dominant","type":"related"},{"name":"transient neonatal diabetes mellitus (disease) caused by mutation in KCNJ11","type":"exact"}],"termid":"MONDO:0012522","xrefs":{"Monarch":{"xref_id":"0012522"}}}


id: PBO:0004108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc1","termid":"PBO:0004108"}


id: MONDO:0008515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare congenital distal limb malformation characterized by complete bilateral syndactyly (involving all digits 1 to 5).","definition_xrefs":["Orphanet:93405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic syndactyly","termid":"MONDO:0019530"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"syndactyly type 4","secondary_identifiers":["GARD:4434","OMIM:186200","MEDGEN:350013","icd11.foundation:75755208","MESH:C566092","DOID:0111818","SCTID:719158007","UMLS:C1861355"],"synonyms":[{"name":"Haas type syndactyly","type":"related"},{"name":"LMBR1 non-syndromic syndactyly","type":"exact"},{"name":"SDTY4","type":"related"},{"name":"Sd4","type":"related"},{"name":"non-syndromic syndactyly caused by mutation in LMBR1","type":"exact"},{"name":"polysyndactyly type Haas","type":"related"},{"name":"polysyndactyly, Haas type","type":"exact"},{"name":"syndactyly, type 4","type":"related"},{"name":"syndactyly, type IV","type":"related"}],"termid":"MONDO:0008515","xrefs":{"Monarch":{"xref_id":"0008515"}}}


id: PBO:0082526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell fusion regulator; cytoplasmic protein localized to shmoo tip; required for alignment of parental nuclei before nuclear fusion during mating; contains a Dbl-homology domain; binds specifically with activated Cdc42p","termid":"PBO:0082526"}


id: PBO:0048615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase, IMAP family member 7","termid":"PBO:0048615"}


id: PBO:0017769
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli rusA and ruvC","termid":"PBO:0017769"}


id: PBO:0058671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6799","termid":"PBO:0058671"}


id: GO:1904292
data:
  {"annotated_genes":["SJAG_01528","SJAG_02244"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79485,80003],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904293"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ERAD pathway.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"regulation of response to endoplasmic reticulum stress","termid":"GO:1905897"},{"relation_name":"regulates","term_name":"ERAD pathway","termid":"GO:0036503"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01528":null,"SJAG_02244":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"regulation of ERAD pathway","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"regulation of ER-associated degradation pathway","type":"related"},{"name":"regulation of endoplasmic reticulum-associated degradation","type":"exact"},{"name":"regulation of endoplasmic reticulum-associated protein degradation pathway","type":"related"}],"termid":"GO:1904292","terms_by_termid":{"GO:1904293":null}}


id: MONDO:0016639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lower limb malformation-hypospadias syndrome is a rare developmental defect during embryogenesis characterized by severe, uni- or bilateral lower limb malformations (incl. tibial hypoplasia, split and rocker bottom-shaped feet, and oligosyndactyly), normal upper limbs and hypospadias. Additional dysmorphic features (e.g. short neck and low-set, large ears), atrial septal defect, ureteropelvic junction stenosis and slight septation of the spleen, have also been reported. There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:2487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower limb deficiency-hypospadias syndrome","secondary_identifiers":["MEDGEN:418952","UMLS:C2930962","MESH:C535640","GARD:18773"],"synonyms":[{"name":"Fried-Goldberg-Mundel syndrome","type":"exact"},{"name":"lower limb malformation-hypospadias syndrome","type":"related"}],"termid":"MONDO:0016639","xrefs":{"Monarch":{"xref_id":"0016639"}}}


id: GO:0016850
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for lyases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other lyase activity (obsolete GO:0016850)","synonyms":[{"name":"other lyase activity","type":"exact"}],"termid":"GO:0016850"}


id: PBO:0042571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDKN2A interacting protein N-terminal like","termid":"PBO:0042571"}


id: MONDO:0016745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diffuse leptomeningeal melanocytosis is a rare tumor of meninges arising from leptomeningeal melanocytes, characterized by diffuse infiltration of the leptomeninges (pia mater and arachnoidea) anywhere in the central nervous system. Clinical features may include stillbirth, intracranial hypertension and hydrocephalus, seizure, ataxia, syringomyelia, cranial nerve palsy, intracranial hemorrhage, sphincter dysfunction and neuropsychiatric symptoms. Transformation into malignant melanoma of the central nervous system was reported. It may be associated with congenital nevi, as a part of neurocutaneous melanosis.","definition_xrefs":["Orphanet:252031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of meninges","termid":"MONDO:0016743"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse leptomeningeal melanocytosis","secondary_identifiers":["MEDGEN:1651380","GARD:20739","UMLS:C4749348"],"synonyms":[{"name":"DLM","type":"exact"},{"name":"leptomeningeal melanomatosis","type":"broad"}],"termid":"MONDO:0016745","xrefs":{"Monarch":{"xref_id":"0016745"}}}


id: MONDO:0011749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism type 1B (OCA1B) is a type of OCA1 characterized by skin and hair hypopigmentation, nystagmus, reduced iris and retinal pigment and misrouting of the optic nerves.","definition_xrefs":["Orphanet:79434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism type 1A","termid":"MONDO:0008745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005093","MONDO:0006025"],"is_obsolete":false,"name":"oculocutaneous albinism type 1B","secondary_identifiers":["MEDGEN:337712","GARD:594","MESH:C537729","OMIM:606952","UMLS:C1847024","DOID:0070095","icd11.foundation:1233842528"],"synonyms":[{"name":"OCA1B","type":"exact"},{"name":"Oca1-Ts","type":"related"},{"name":"Yellow albinism","type":"related"},{"name":"Yellow mutant albinism","type":"related"},{"name":"Yellow oculocutaneous albinism","type":"exact"},{"name":"albinism, Yellow mutant type","type":"exact"},{"name":"albinism, oculocutaneous, type 1B","type":"related"},{"name":"albinism, oculocutaneous, type I, temperature-sensitive","type":"related"},{"name":"albinism, oculocutaneous, type IB","type":"related"},{"name":"oculocutaneous albinism type IB","type":"related"},{"name":"oculocutaneous albinism, Amish type","type":"exact"},{"name":"oculocutaneous albinism, type 1B","type":"related"},{"name":"platinum oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0011749","xrefs":{"Monarch":{"xref_id":"0011749"}}}


id: PBO:0074473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin like 2","termid":"PBO:0074473"}


id: MONDO:0011232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial or sporadic hemiplegic migraine in which the cause of the disease is a mutation in the ATP1A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemiplegic migraine","termid":"MONDO:0000700"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine, familial hemiplegic, 2","secondary_identifiers":["MEDGEN:355962","UMLS:C1865322","DOID:0111182","MESH:C537246","GARD:10095","OMIM:602481"],"synonyms":[{"name":"ATP1A2 familial or sporadic hemiplegic migraine","type":"exact"},{"name":"FHM2","type":"related"},{"name":"Mhp2","type":"related"},{"name":"familial hemiplegic migraine type 2","type":"related"},{"name":"familial or sporadic hemiplegic migraine caused by mutation in ATP1A2","type":"exact"},{"name":"hemiplegic migraine, familial type 2","type":"related"},{"name":"migraine, familial basilar","type":"related"},{"name":"migraine, familial hemiplegic, 2","type":"exact"},{"name":"migraine, familial hemiplegic, type 2","type":"exact"}],"termid":"MONDO:0011232","xrefs":{"Monarch":{"xref_id":"0011232"}}}


id: PBO:0066068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor beta","termid":"PBO:0066068"}


id: PBO:0121067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COTL1 antisense RNA 1","termid":"PBO:0121067"}


id: GO:0052664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a primary nitroalkane + H2O + O2 = an aldehyde + H+ + H2O2 + nitrite; also converts secondary nitroalkanes to a ketone.","definition_xrefs":["EC:1.7.3.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, oxygen as acceptor","termid":"GO:0016663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"nitroalkane oxidase activity","synonyms":[{"name":"NAO activity","type":"related"},{"name":"nitroalkane reductase activity","type":"related"},{"name":"nitroalkane:oxygen oxidoreductase activity","type":"related"}],"termid":"GO:0052664"}


id: PBO:0066492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ret finger protein like 4A pseudogene 3","termid":"PBO:0066492"}


id: MONDO:0033642
data:
  {"annotated_genes":["SJAG_00043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87738],"is_not":false,"summary":null,"term":"MONDO:0033642"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn disorder of ornithine metabolism","termid":"MONDO:0017356"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"},{"relation_name":"is_a","term_name":"disorder of polyamine metabolism","termid":"MONDO:0800159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00043":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with alopecia and brain abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:544488","GARD:17987","OMIM:619075","MEDGEN:1775930","UMLS:C5436741"],"synonyms":[{"name":"Bachmann-Bupp syndrome","type":"exact"},{"name":"NEDABA","type":"exact"},{"name":"global developmental delay-alopecia-macrocephaly-facial dysmorphism-structural brain anomalies syndrome","type":"exact"}],"termid":"MONDO:0033642","terms_by_termid":{"MONDO:0033642":null},"xrefs":{"Monarch":{"xref_id":"0033642"}}}


id: PBO:0027442
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_double-strand_break_repair_via_homologous_recombination","termid":"PBO:0027442"}


id: PR:O14037
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC2C4.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0538 protein C2C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.04c","synonyms":[{"name":"Spom972h-SPAC2C4.04c","type":"exact"}],"termid":"PR:O14037"}


id: FYPO:0006868
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the cell cortex is decreased during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to cell cortex","termid":"FYPO:0006867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to cell cortex during meiotic prophase I","synonyms":[{"name":"decreased protein localisation to cell cortex during meiotic prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase I","type":"exact"},{"name":"decreased protein localization to cell cortex during prophase of meiosis I","type":"exact"},{"name":"decreased protein localization to cell cortex in zygote","type":"related"},{"name":"reduced protein localization to cell cortex during meiotic prophase I","type":"exact"}],"termid":"FYPO:0006868"}


id: PATO:0001833
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"male fertile","termid":"PATO:0000891"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased male fertility","synonyms":[{"name":"low male fertility","type":"exact"}],"termid":"PATO:0001833"}


id: GO:0018515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + pimelyl-CoA = 2,3-didehydropimeloyl-CoA + H+ + NADH.","definition_xrefs":["RHEA:19665","EC:1.3.1.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"pimeloyl-CoA dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R05311","MetaCyc:1.3.1.62-RXN","UM-BBD_reactionID:r0194"],"synonyms":[{"name":"pimeloyl-CoA:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0018515"}


id: MONDO:0007464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Isolated distichiasis is a rare congenital eyelid anomaly characterized by an accessory row of eyelashes (that may be partial or complete) posterior to the normal row of cilia, at or close to the meibomian gland orifices, that is not associated with any other condition, and that may lead to ocular irritation and corneal damage if left untreated.","definition_xrefs":["Orphanet:99177"],"gene_count":0,"genotype_count":0,"name":"obsolete isolated distichiasis (obsolete MONDO:0007464)","secondary_identifiers":["ICD9:743.63","SCTID:95339000","OMIM:126300"],"synonyms":[{"name":"distichiasis","type":"related"},{"name":"eyelashes, two rows of","type":"related"}],"termid":"MONDO:0007464","xrefs":{"Monarch":{"xref_id":"0007464"}}}


id: PBO:0030928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_citrate_(Si)-synthase_activity","termid":"PBO:0030928"}


id: GO:1905293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of neural crest cell differentiation.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:rl","GOC:TermGenie","PMID:15073157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of neural crest cell differentiation","termid":"GO:1905292"},{"relation_name":"is_a","term_name":"negative regulation of stem cell differentiation","termid":"GO:2000737"},{"relation_name":"negatively_regulates","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neural crest cell differentiation","synonyms":[{"name":"down regulation of neural crest cell differentiation","type":"exact"},{"name":"down-regulation of neural crest cell differentiation","type":"exact"},{"name":"downregulation of neural crest cell differentiation","type":"exact"},{"name":"inhibition of neural crest cell differentiation","type":"narrow"}],"termid":"GO:1905293"}


id: MONDO:0005663
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurologic syndrome following injury of the spinal sympathetic nerves of the neck. The injury usually results from arthritis or pinching by the adjacent vertebrae. Symptoms include facial pain, chronic allergies, dizziness, neck pain, ear pain and vertigo.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Barre-Lieou syndrome","secondary_identifiers":["MEDGEN:87688","SCTID:17300000","DOID:6692","MESH:D055010","NCIT:C34411","UMLS:C0376378","ICD10CM:M53.0","ICD9:723.2"],"synonyms":[{"name":"Cervicocranial syndrome","type":"exact"},{"name":"posterior cervical sympathetic syndrome","type":"exact"}],"termid":"MONDO:0005663","xrefs":{"Monarch":{"xref_id":"0005663"}}}


id: PBO:0042171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular communication network factor 2","termid":"PBO:0042171"}


id: FYPO:0001125
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has a normal shape.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal vegetative cell shape","synonyms":[{"name":"normal cell shape during vegetative growth","type":"exact"},{"name":"normal vegetative cell shape during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001125"}


id: GO:0003821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete class II major histocompatibility complex antigen (obsolete GO:0003821)","synonyms":[{"name":"class II major histocompatibility complex antigen","type":"exact"}],"termid":"GO:0003821"}


id: MOD:01352
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to a nitrated L-tyrosine.","definition_xrefs":["PubMed:14678012","OMSSA:86","PubMed:9252331","Unimod:354#Y","PubMed:8839040"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrosylation","termid":"MOD:00461"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrated L-tyrosine","synonyms":[{"name":"Nitro","type":"related"},{"name":"Oxidation to nitro","type":"related"},{"name":"nitroy","type":"exact"}],"termid":"MOD:01352"}


id: PBO:0068513
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 104, pseudogene","termid":"PBO:0068513"}


id: GO:0036168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to an increase in temperature.","definition_xrefs":["GOC:di","PMID:17554048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to heat","termid":"GO:0009408"},{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms","termid":"GO:0044182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to heat","termid":"GO:0036168"}


id: PBO:0050912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon induced protein with tetratricopeptide repeats 3","termid":"PBO:0050912"}


id: PBO:0046180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation factor for RNA polymerase II 2 pseudogene 1","termid":"PBO:0046180"}


id: PBO:0046480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 5, endonuclease","termid":"PBO:0046480"}


id: GO:2000261
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of blood coagulation, common pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of blood coagulation","termid":"GO:0030195"},{"relation_name":"is_a","term_name":"negative regulation of protein activation cascade","termid":"GO:2000258"},{"relation_name":"is_a","term_name":"regulation of blood coagulation, common pathway","termid":"GO:2000260"},{"relation_name":"negatively_regulates","term_name":"blood coagulation, common pathway","termid":"GO:0072377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"negatively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0051604","GO:0010467"],"is_obsolete":false,"name":"negative regulation of blood coagulation, common pathway","termid":"GO:2000261"}


id: GO:0051861
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycolipid, any compound containing one or more monosaccharide residues bound by a glycosidic linkage to a hydrophobic group such as an acylglycerol, a sphingoid, a ceramide (N-acylsphingoid) or a prenyl phosphate.","definition_xrefs":["PMID:19635802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid binding","termid":"GO:0008289"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0008289","GO:0003674"],"is_obsolete":false,"name":"glycolipid binding","termid":"GO:0051861"}


id: PBO:0059028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 17","termid":"PBO:0059028"}


id: PBO:0088156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vesicle membrane receptor protein (v-SNARE); involved in the fusion between Golgi-derived secretory vesicles with the plasma membrane; proposed to be involved in endocytosis; member of the synaptobrevin/VAMP family of R-type v-SNARE proteins; SNC1 has a paralog, SNC2, that arose from the whole genome duplication","termid":"PBO:0088156"}


id: MONDO:0010575
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of congenital mixed hearing loss with perilymphatic gusher (Gusher syndrome or DFN3), hypogonadism and abnormal behavior.","definition_xrefs":["Orphanet:90646"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness-hypogonadism syndrome","secondary_identifiers":["UMLS:C1844680","GARD:1691","MEDGEN:335003","MESH:C564435","OMIM:304350"],"synonyms":[{"name":"DHS","type":"related"},{"name":"deafness hypogonadism syndrome","type":"related"},{"name":"deafness-hypogonadism syndrome","type":"exact"}],"termid":"MONDO:0010575","xrefs":{"Monarch":{"xref_id":"0010575"}}}


id: PBO:0041026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'(2'), 5'-bisphosphate nucleotidase 1","termid":"PBO:0041026"}


id: PATO:0000203
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000203 short term memory (obsolete PATO:0000203)","termid":"PATO:0000203"}


id: PBO:0082020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zyg-11 family member A, cell cycle regulator","termid":"PBO:0082020"}


id: GO:0005308
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of creatine from one side of a membrane to the other. Creatine is a compound synthesized from the amino acids arginine, glycine, and methionine that occurs in muscle.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"creatine transmembrane transporter activity","termid":"GO:0005308"}


id: MOD:01261
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["PubMed:15549660","Unimod:270#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleophilic addtion to cytopiloyne","termid":"MOD:00590"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophilic addtion to cytopiloyne - site S","synonyms":[{"name":"Cytopiloyne","type":"related"},{"name":"nucleophilic addtion to cytopiloyne","type":"related"}],"termid":"MOD:01261"}


id: GO:0042382
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Discrete subnuclear bodies in the interchromatin nucleoplasmic space, often located adjacent to nuclear specks. 10-20 paraspeckles are typically found in human cell nuclei.","definition_xrefs":["PMID:11790299","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear ribonucleoprotein granule","termid":"GO:0140168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"paraspeckles","secondary_identifiers":["Wikipedia:Paraspeckle"],"termid":"GO:0042382"}


id: MONDO:0017408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare disorder that appears after the first year and a half of life in previously healthy children. It is characterized by rapid-onset weight gain, hypothalamic dysfunction, breathing abnormalities, and autonomic system dysregulation. The hypothalamic dysfunction manifestations include inability to maintain normal water balance, high prolactin levels, low thyroid, low cortisol, and early or late puberty. The breathing abnormalities include sleep apnea and alveolar hypoventilation, requiring ventilation support. The autonomic system dysregulation includes eye abnormalities, intestinal abnormalities, temperature dysregulation, and low heart rhythm. This disorder requires early recognition because it may lead to cardiorespiratory arrest. Up to 40% of the patients develop tumors of neural crest origin.","definition_xrefs":["NCIT:C121944"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapid-onset childhood obesity-hypothalamic dysfunction-hypoventilation-autonomic dysregulation syndrome","secondary_identifiers":["GARD:10407","Orphanet:293987","UMLS:C4751121","MEDGEN:1670711","NORD:1648"],"synonyms":[{"name":"ROHHAD","type":"exact"},{"name":"ROHHAD syndrome","type":"exact"},{"name":"ROHHADNET","type":"exact"},{"name":"Rapid-onset Obesity with Hypothalamic Dysfunction, Hypoventilation, and Autonomic Dysregulation","type":"exact"},{"name":"rapid-onset childhood obesity-hypothalamic dysfunction-hypoventilation-autonomic dysregulation-neural tumors syndrome","type":"exact"},{"name":"rapid-onset childhood obesity-hypothalamic dysfunction-hypoventilation-autonomic dysregulation-neural tumours syndrome","type":"exact"},{"name":"rapid-onset obesity with hypothalamic dysfunction, hypoventilation and autonomic dysregulation","type":"related"},{"name":"rapid-onset obesity with hypothalamic dysfunction, hypoventilation, and autonomic dysregulation","type":"exact"},{"name":"rapid-onset obesity with hypothalamic dysfunction, hypoventilation, and autonomic dysregulation syndrome","type":"exact"}],"termid":"MONDO:0017408","xrefs":{"Monarch":{"xref_id":"0017408"}}}


id: GO:0071476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of detection of, or exposure to, a hypotonic environment, i.e. an environment with a lower concentration of solutes than the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonic response","termid":"GO:0006971"},{"relation_name":"is_a","term_name":"cellular response to osmotic stress","termid":"GO:0071470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular hypotonic response","synonyms":[{"name":"cellular hypo-osmotic response","type":"exact"}],"termid":"GO:0071476"}


id: PBO:0086839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein tyrosine phosphatase; required for cell cycle arrest in response to oxidative damage of DNA","termid":"PBO:0086839"}


id: PBO:0065353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 3","termid":"PBO:0065353"}


id: MONDO:0700151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain or spinal cord tumor arising from glial cells that occurs in dogs.","definition_xrefs":["NCIT:C129297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine neoplasm","termid":"MONDO:0700139"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine glioma","termid":"MONDO:0700151","xrefs":{"Monarch":{"xref_id":"0700151"}}}


id: PBO:0114382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane carboxylic acid transmembrane transporter Tna1","termid":"PBO:0114382"}


id: MONDO:0017343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A range of lymphoproliferative diseases characterized by uncontrolled proliferation of B cells, T cells, or NK cells infected with Epstein-Barr virus. Depending on host immunity and viral factors, viral persistence in host cells can induce lymphoproliferation with a diverse clinical spectrum ranging from simple reactive hyperplasia to aggressive lymphoma/leukemia with unique clinical and pathological presentations.","definition_xrefs":["PMID:38882456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Epstein-Barr virus-related tumor","termid":"MONDO:0017342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Epstein-Barr virus-associated lymphoproliferative disorder","secondary_identifiers":["MEDGEN:797800","MedDRA:10068349","Orphanet:289644","GARD:21147","UMLS:C2363744"],"synonyms":[{"name":"EBV-associated lymphoproliferative disorder","type":"exact"},{"name":"Epstein-Barr virus-associated malignant lymphoproliferative disorder","type":"narrow"}],"termid":"MONDO:0017343","xrefs":{"Monarch":{"xref_id":"0017343"}}}


id: FYPO:0006202
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to hydroxyurea is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal RNA level during cellular response to hydroxyurea","synonyms":[{"name":"normal RNA accumulation during cellular response to hydroxyurea","type":"related"},{"name":"normal RNA level during cellular response to HU","type":"exact"},{"name":"normal RNA level during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"normal mRNA level during cellular response to hydroxyurea","type":"narrow"},{"name":"normal transcript level during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0006202"}


id: GO:0035320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Determination of the site in the cell of an imaginal disc-derived wing at which a prehair initiates outgrowth. Restriction of prehair initiation to the distalmost part of a cell is essential to ensure that each wing epithelial cell produces one adult hair that points distally.","definition_xrefs":["GOC:mtg_transport","PMID:8947551","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of proximal/distal cell polarity","termid":"GO:0022606"},{"relation_name":"part_of","term_name":"establishment of imaginal disc-derived wing hair orientation","termid":"GO:0001737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing hair site selection","synonyms":[{"name":"prehair localization","type":"related"},{"name":"wing hair site selection","type":"exact"}],"termid":"GO:0035320"}


id: MONDO:0022876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cortes Lacassie syndrome","termid":"MONDO:0022876","xrefs":{"Monarch":{"xref_id":"0022876"}}}


id: GO:0034533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1,2-dihydroxy-7-hydroxymethylnaphthalene + O2 = 2-hydroxy-7-hydroxymethylchromene-2-carboxylate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,2-dihydroxy-7-hydroxymethylnaphthalene dioxygenase activity (obsolete GO:0034533)","termid":"GO:0034533"}


id: PBO:0069111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 360, pseudogene","termid":"PBO:0069111"}


id: PBO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAGA complex phosphatidylinositol pseudokinase Tra1","termid":"PBO:0003810"}


id: GO:0060915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell of the lung. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation involved in lung development","termid":"GO:0060915"}


id: GO:0060813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a mRNA is transported to, and maintained in the anterior portion of the oocyte and/or syncytial embryo contributing to the specification of the anterior/posterior axis.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular mRNA localization involved in anterior/posterior axis specification","termid":"GO:0060811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"anterior mRNA localization involved in anterior/posterior axis specification","synonyms":[{"name":"anterior mRNA localisation involved in anterior/posterior axis specification","type":"exact"}],"termid":"GO:0060813"}


id: MONDO:0005604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete plasma cell leukemia (obsolete MONDO:0005604)","termid":"MONDO:0005604","xrefs":{"Monarch":{"xref_id":"0005604"}}}


id: PBO:0036381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human CXorf56 and C15orf40 ortholog","termid":"PBO:0036381"}


id: FYPO:0003097
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 in centromere outer repeat regions does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 methylation during vegetative growth","termid":"FYPO:0002566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H3-K9 methylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"abolished histone H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation at centromere otr during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"abolished histone H3-K9 methylation at centromeric dg repeats during vegetative growth","type":"narrow"},{"name":"abolished histone H3-K9 methylation at centromeric outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone H3-K9 methylation at pericentric region during vegetative growth","type":"related"},{"name":"abolished histone H3-K9 methylation at pericentromeric region during vegetative growth","type":"related"},{"name":"abolished histone H3K9me at centromere outer repeat during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K9 methylation at centromere outer repeat during vegetative growth","type":"exact"},{"name":"histone H3-K9 methylation at centromere outer repeat abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0003097"}


id: GO:0075297
data:
  {"annotated_genes":["SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113253],"is_not":false,"summary":null,"term":"GO:0075297"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of ascospore formation, a process in which a sexual spore, named ascospore, from Ascomycete fungi was produced inside an ascus.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of ascospore formation","termid":"GO:0034307"},{"relation_name":"is_a","term_name":"negative regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043942"},{"relation_name":"negatively_regulates","term_name":"ascospore formation","termid":"GO:0030437"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030437"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0030437"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0030437"],"is_obsolete":false,"name":"negative regulation of ascospore formation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0075297","terms_by_termid":{"GO:0075297":null}}


id: PBO:0046022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2A pseudogene 3","termid":"PBO:0046022"}


id: PBO:0086029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; YGR079W is not an essential gene","termid":"PBO:0086029"}


id: PBO:0076703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor 4","termid":"PBO:0076703"}


id: MONDO:0002823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid gland medullary carcinoma (obsolete MONDO:0002823)","termid":"MONDO:0002823","xrefs":{"Monarch":{"xref_id":"0002823"}}}


id: FYECO:0000319
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which brefeldin A (BFA) was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ BFA","synonyms":[{"name":"+ brefeldin A","type":"exact"}],"termid":"FYECO:0000319"}


id: PR:O13856
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD repeat-containing protein 55 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00426","PRO:DNx","PANTHER:PTHR22840:SF2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C1A6.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1A6.02","secondary_identifiers":["UniProtKB:O13856"],"synonyms":[{"name":"Spom972h-WDR55","type":"exact"}],"termid":"PR:O13856"}


id: FYPO:0003051
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which homologous chromosome pairing during meiosis (synapsis) is normal (i.e. indistinguishable from wild type) at a cis-acting homologous chromosome pairing region such as the omt3 locus on chromosome 1 or the sme2 locus on chromosome 2.","definition_xrefs":["PMID:23117617","PMID:22582262","PMID:24173580","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal homologous chromosome pairing","termid":"FYPO:0003050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal homologous chromosome pairing at cis-acting homologous chromosome pairing region","synonyms":[{"name":"normal homologous chromosome pairing at meiosis at cis-acting homologous chromosome pairing region","type":"exact"},{"name":"normal synapsis at cis-acting homologous chromosome pairing region","type":"exact"}],"termid":"FYPO:0003051"}


id: FYPO:0008287
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 1-chloro-2,4-dinitrobenzene (CDNB). Cells stop growing (and may die) at a concentration of 1-chloro-2,4-dinitrobenzene that allows wild type cells to grow.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to 1-chloro-2,4-dinitrobenzene","termid":"FYPO:0008287"}


id: PBO:0058495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR5689 host gene","termid":"PBO:0058495"}


id: PBO:0033763
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_chromosome_arms","termid":"PBO:0033763"}


id: PBO:0061191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin U receptor 1","termid":"PBO:0061191"}


id: MONDO:0020089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of lipodystrophy (disease) that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"lipodystrophy","termid":"MONDO:0006573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"acquired lipodystrophy","secondary_identifiers":["MEDGEN:798705","UMLS:C0877192","GARD:12602","MedDRA:10049287","Orphanet:98307"],"synonyms":[{"name":"acquired lipodystrophy (disease)","type":"exact"}],"termid":"MONDO:0020089","xrefs":{"Monarch":{"xref_id":"0020089"}}}


id: PBO:0121135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XPOT pseudogene 3","termid":"PBO:0121135"}


id: GO:0106430
data:
  {"annotated_genes":["SJAG_00197"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57566],"is_not":false,"summary":null,"term":"GO:0106430"}]},"cv_name":"molecular_function","definition":"(S)-dihydroorotate + a quinone = orotate + a quinol.","definition_xrefs":["RHEA:30187"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, quinone or related compound as acceptor","termid":"GO:0016635"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00197":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (quinone) activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:1.3.5.2"],"termid":"GO:0106430","terms_by_termid":{"GO:0106430":null}}


id: GO:0033829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-GlcNAc residue from UDP-D-GlcNAc to the fucose residue of a fucosylated protein acceptor.","definition_xrefs":["EC:2.4.1.222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1912355","MetaCyc:2.4.1.222-RXN","Reactome:R-HSA-5096538"],"synonyms":[{"name":"O-fucosylpeptide beta-1,3-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"UDP-D-GlcNAc:O-L-fucosylpeptide 3-beta-N-acetyl-D-glucosaminyltransferase activity","type":"related"}],"termid":"GO:0033829"}


id: GO:0034053
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont modulates the frequency, rate or extent of defense-related programmed cell death in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of host defense-related programmed cell death (obsolete GO:0034053)","synonyms":[{"name":"modulation by symbiont of host HR","type":"narrow"},{"name":"modulation by symbiont of host defense-related PCD","type":"exact"},{"name":"modulation by symbiont of host defense-related programmed cell death","type":"exact"},{"name":"modulation by symbiont of host hypersensitive response","type":"narrow"},{"name":"modulation by symbiont of plant HR","type":"narrow"},{"name":"modulation by symbiont of plant hypersensitive response","type":"narrow"}],"termid":"GO:0034053"}


id: PBO:0057718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-3","termid":"PBO:0057718"}


id: MONDO:0017741
data:
  {"annotated_genes":["SJAG_04053","SJAG_04316","SJAG_01491","SJAG_03188"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87174],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012248"},{"annotations":[88653,88652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013162"},{"annotations":[87922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014142"},{"annotations":[87829,87827,87828],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009364"},{"annotations":[87915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014140"},{"annotations":[88647,88646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013154"},{"annotations":[88651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013159"},{"annotations":[87920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014141"},{"annotations":[88649,88650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013160"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of protein O-linked glycosylation.","definition_xrefs":["MONDO:patterns/basis_in_disruption_of_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation","termid":"MONDO:0015286"},{"relation_name":"is_a","term_name":"glycoprotein metabolism disease","termid":"MONDO:0045010"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01491":null,"SJAG_03188":null,"SJAG_04053":null,"SJAG_04316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"disorder of protein O-glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:309447","UMLS:C5681041","GARD:21336","icd11.foundation:1883085871","MEDGEN:1842631"],"synonyms":[{"name":"disorder of protein O-linked glycosylation","type":"exact"},{"name":"protein O-linked glycosylation disease","type":"exact"}],"termid":"MONDO:0017741","terms_by_termid":{"MONDO:0009364":null,"MONDO:0012248":null,"MONDO:0013154":null,"MONDO:0013159":null,"MONDO:0013160":null,"MONDO:0013162":null,"MONDO:0014140":null,"MONDO:0014141":null,"MONDO:0014142":null},"xrefs":{"Monarch":{"xref_id":"0017741"}}}


id: _global:positively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of positively regulates","direct_ancestors":[{"relation_name":"is_a","term_name":"regulated_by","termid":"_global:regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"positively_regulated_by","secondary_identifiers":["RO:0002336"],"termid":"_global:positively_regulated_by"}


id: GO:0140977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity of acetone. These may include chemical modification, for example to methylglyoxal.","definition_xrefs":["PMID:26958851","PMID:22314896"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0008150","GO:0098754"],"is_obsolete":false,"name":"cellular detoxification of acetone","termid":"GO:0140977"}


id: PBO:0063381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"programmed cell death 1 ligand 2","termid":"PBO:0063381"}


id: GO:0035663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a Toll-like 2 protein, a pattern recognition receptor that binds microbial pattern motifs to initiate an innate immune response.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Toll-like receptor binding","termid":"GO:0035325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"Toll-like receptor 2 binding","synonyms":[{"name":"TLR2 binding","type":"exact"}],"termid":"GO:0035663"}


id: PBO:0064508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit I","termid":"PBO:0064508"}


id: RO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"RO:0002411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of,_positive_effect","termid":"RO:0002304"}


id: PBO:0045259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyribonuclease 2 beta","termid":"PBO:0045259"}


id: MONDO:0032728
data:
  {"annotated_genes":["SJAG_01649"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89110],"is_not":false,"summary":null,"term":"MONDO:0032728"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, axonal, type 2EE","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618400","MEDGEN:1677426","DOID:0111559","UMLS:C5193076"],"synonyms":[{"name":"CHARCOT-MARIE-TOOTH DISEASE, AXONAL, TYPE 2EE","type":"related"},{"name":"CMT2EE","type":"related"},{"name":"Charcot-Marie-Tooth Neuropathy, Type 2Ee","type":"related"}],"termid":"MONDO:0032728","terms_by_termid":{"MONDO:0032728":null},"xrefs":{"Monarch":{"xref_id":"0032728"}}}


id: MONDO:0006541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epidermolysis bullosa (EB) is a group of genetic skin diseases that cause the skin to blister very easily. Blisters form in response to minor injuries or friction, such as rubbing or scratching. There are four main types of epidermolysis bullosa: dystrophic epidermolysis bullosa Epidermolysis bullosa simplex Junctional epidermolysis bullosa Kindler Syndrome Identifying the exact type can be hard because there are many subtypes of EB. Within each type or subtype, a person may be mildly or severely affected. The disease can range from being a minor inconvenience to completely disabling, and fatal in some cases. Most types of EB are inherited. The inheritance pattern may be autosomal dominant or autosomal recessive. Management involves protecting the skin, reducing friction against the skin, and keeping the skin cool.","direct_ancestors":[{"relation_name":"is_a","term_name":"vesiculobullous skin disease","termid":"MONDO:0006617"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa","secondary_identifiers":["EFO:1000690","DOID:2730","ICD9:757.39","UMLS:C0014527","NANDO:1200234","NANDO:2201000","MEDGEN:41832","SCTID:61003004","NCIT:C67383","Wikipedia:Epidermolysis_bullosa","MESH:D004820","ICD10CM:Q81","NANDO:2100284","GARD:6359","ICD10WHO:Q81"],"synonyms":[{"name":"EB","type":"related"},{"name":"acantholysis bullosa","type":"exact"},{"name":"epidermolysis bullosa","type":"exact"}],"termid":"MONDO:0006541","xrefs":{"Monarch":{"xref_id":"0006541"}}}


id: GO:0015922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: aspartate + O2 = iminosuccinate + hydrogen peroxide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aspartate oxidase activity (obsolete GO:0015922)","termid":"GO:0015922"}


id: PBO:0025488
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrullinaemia type I","termid":"PBO:0025488"}


id: MONDO:0021664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cervical aortic arch (obsolete MONDO:0021664)","termid":"MONDO:0021664","xrefs":{"Monarch":{"xref_id":"0021664"}}}


id: GO:0042863
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["GOC:jl","PMID:6794030"],"gene_count":0,"genotype_count":0,"name":"obsolete pyochelin metabolic process (obsolete GO:0042863)","synonyms":[{"name":"pyochelin metabolism","type":"exact"}],"termid":"GO:0042863"}


id: MONDO:0016992
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete peeling skin syndrome type B (obsolete MONDO:0016992)","termid":"MONDO:0016992","xrefs":{"Monarch":{"xref_id":"0016992"}}}


id: PBO:0048397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth arrest specific 2 like 3","termid":"PBO:0048397"}


id: PBO:0044529
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dishevelled binding antagonist of beta catenin 3","termid":"PBO:0044529"}


id: PBO:0075833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"somatostatin receptor 1","termid":"PBO:0075833"}


id: PBO:0072097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 28","termid":"PBO:0072097"}


id: PBO:0063783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 8","termid":"PBO:0063783"}


id: PBO:0062971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 3","termid":"PBO:0062971"}


id: MONDO:0000489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain disease that is characterized by functional impairment of cognition, cerebral signal conduction, neurotransmission and synaptic plasticity, and underlying structural pathology associated with diabetes.","definition_xrefs":["DOID:0050850","PMID:20798963"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetic encephalopathy","secondary_identifiers":["UMLS:C1868773","MEDGEN:1806599"],"termid":"MONDO:0000489","xrefs":{"Monarch":{"xref_id":"0000489"}}}


id: FYPO:0007042
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of alkaline phosphatase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased phosphatase activity","termid":"FYPO:0004304"},{"relation_name":"is_a","term_name":"abnormal alkaline phosphatase activity","termid":"FYPO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661","FYPO:0000652"],"is_obsolete":false,"name":"decreased alkaline phosphatase activity","synonyms":[{"name":"reduced alkaline phosphatase activity","type":"exact"}],"termid":"FYPO:0007042"}


id: PBO:0085664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in nonstop mRNA decay; predicted to be palmitoylated","termid":"PBO:0085664"}


id: PBO:0054610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2015","termid":"PBO:0054610"}


id: FYPO:0002222
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the meiotic spindle is longer than normal during meiosis II.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long meiotic spindle","termid":"FYPO:0000736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002399","FYPO:0001985","FYPO:0000120","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"long meiosis II spindle","synonyms":[{"name":"elongated meiosis II spindle","type":"exact"},{"name":"long spindle during meiosis II","type":"exact"},{"name":"long spindle during second meiotic nuclear division","type":"exact"},{"name":"meiosis II spindle overextension","type":"exact"}],"termid":"FYPO:0002222"}


id: PBO:0081077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC8B, pseudogene","termid":"PBO:0081077"}


id: GO:0150143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of CD80 biosynthetic process.","definition_xrefs":["PMID:26936882","GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of CD80 production (obsolete GO:0150143)","synonyms":[{"name":"regulation of CD80 biosynthetic process","type":"exact"}],"termid":"GO:0150143"}


id: GO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of signal transduction mediated by the ERK5 cascade.","definition_xrefs":["ISBN:0121245462","GOC:add","ISBN:0896039986"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of MAPK cascade","termid":"GO:0043409"},{"relation_name":"is_a","term_name":"regulation of ERK5 cascade","termid":"GO:0070376"},{"relation_name":"negatively_regulates","term_name":"ERK5 cascade","termid":"GO:0070375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of ERK5 cascade","synonyms":[{"name":"down regulation of BMK cascade","type":"exact"},{"name":"down-regulation of BMK cascade","type":"exact"},{"name":"downregulation of BMK cascade","type":"exact"},{"name":"inhibition of BMK cascade","type":"narrow"},{"name":"negative regulation of BMK cascade","type":"exact"},{"name":"negative regulation of BMK signaling pathway","type":"exact"},{"name":"negative regulation of BMK signalling pathway","type":"exact"},{"name":"negative regulation of BMK1 cascade","type":"exact"},{"name":"negative regulation of ERK5 signaling pathway","type":"exact"},{"name":"negative regulation of MAPK7 cascade","type":"exact"}],"termid":"GO:0070377"}


id: PBO:0108898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPL7L1 pseudogene 11","termid":"PBO:0108898"}


id: GO:0030005
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent or trivalent cations at the level of a cell.","definition_xrefs":["GOC:mah","GOC:ceb"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular di-, tri-valent inorganic cation homeostasis (obsolete GO:0030005)","synonyms":[{"name":"cellular di-, tri-valent inorganic cation homeostasis","type":"exact"}],"termid":"GO:0030005"}


id: FYPO:0005044
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A gene expression phenotype that affects the regulation of translation in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulation phenotype","termid":"FYPO:0000289"},{"relation_name":"is_a","term_name":"gene expression regulation phenotype during vegetative growth","termid":"FYPO:0001333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"translation regulation phenotype during vegetative growth","synonyms":[{"name":"fission yeast translation regulation phenotype during vegetative growth","type":"exact"},{"name":"translation regulation phenotype during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005044"}


id: PBO:0057037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 130a","termid":"PBO:0057037"}


id: PBO:0040008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 16","termid":"PBO:0040008"}


id: PBO:0046283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMAP like 2","termid":"PBO:0046283"}


id: PBO:0039107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AHI1 divergent transcript","termid":"PBO:0039107"}


id: MONDO:0003206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma that is not present at birth but develops later in life.","definition_xrefs":["NCIT:C27018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired hemangioma","secondary_identifiers":["MEDGEN:208988","UMLS:C0856897","DOID:492"],"synonyms":[{"name":"acquired hemangioma","type":"exact"}],"termid":"MONDO:0003206","xrefs":{"Monarch":{"xref_id":"0003206"}}}


id: PBO:0065381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSG8 antisense RNA 1","termid":"PBO:0065381"}


id: GO:0039720
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nuclear viral factory formed by Baculoviruses. A vesicular structure in which virions are assembled.","definition_xrefs":["PMID:1433508","VZ:1951","PMID:13358757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear viral factory","termid":"GO:0039715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virogenic stroma","synonyms":[{"name":"VS","type":"exact"}],"termid":"GO:0039720"}


id: PBO:0043430
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cornichon family AMPA receptor auxiliary protein 2","termid":"PBO:0043430"}


id: PR:O43009
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug110 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 110 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2G2.10c","synonyms":[{"name":"Spom972h-mug110","type":"exact"}],"termid":"PR:O43009"}


id: PATO:0005024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed along the longitudinal or anterior-posterior axis.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"longitudinal orientation","termid":"PATO:0005024"}


id: PBO:0063013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2","termid":"PBO:0063013"}


id: GO:0070464
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to the alpha3 chain of type VI collagen; the integrin binds most strongly to unfolded collagen.","definition_xrefs":["PMID:8387021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"alphav-beta3 integrin-collagen alpha3(VI) complex","termid":"GO:0070464"}


id: MONDO:0012503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of thiopurine S-methyltransferase activity.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiopurine metabolic disease","termid":"MONDO:0000210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thiopurine S-methyltransferase deficiency","secondary_identifiers":["icd11.foundation:1916778396","MEDGEN:83352","OMIM:610460","DOID:0061004","DOID:0080172","MESH:C536512","UMLS:C0342801","Orphanet:3315","NCIT:C4389","SCTID:238012003"],"synonyms":[{"name":"6-mercaptopurine sensitivity","type":"related"},{"name":"THPM1","type":"related"},{"name":"TPMT deficiency","type":"exact"},{"name":"Thiopurines, poor metabolism of","type":"related"},{"name":"Thiopurines, poor metabolism of, 1","type":"related"},{"name":"inborn error of thiopurine S-methyltransferase activity","type":"exact"},{"name":"inborn thiopurine S-methyltransferase activity disorder","type":"exact"},{"name":"poor metabolism of thiopurines-1","type":"exact"},{"name":"rare inborn error of thiopurine S-methyltransferase activity","type":"exact"},{"name":"thiopurine S methyltranferase deficiency","type":"related"},{"name":"thiopurine S-methyltransferase deficiency","type":"exact"},{"name":"thiopurine methyltransferase deficiency","type":"related"},{"name":"thiopurines, poor metabolism of, 1","type":"related"}],"termid":"MONDO:0012503","xrefs":{"Monarch":{"xref_id":"0012503"}}}


id: MONDO:0001800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"equatorial staphyloma","secondary_identifiers":["MEDGEN:509935","SCTID:82146006","UMLS:C0155361","icd11.foundation:120412682","ICD9:379.13","DOID:13788","ICD10CM:H15.81"],"termid":"MONDO:0001800","xrefs":{"Monarch":{"xref_id":"0001800"}}}


id: GO:0030158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a beta-D-xylosyl residue from UDP-D-xylose to the serine hydroxyl group of an acceptor protein substrate.","definition_xrefs":["EC:2.4.2.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-xylosyltransferase activity","termid":"GO:0035252"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757","GO:0140096"],"is_obsolete":false,"name":"protein xylosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-1878002","MetaCyc:2.4.2.26-RXN","RHEA:50192"],"synonyms":[{"name":"UDP-D-xylose:core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:core protein xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-D-xylose:proteoglycan core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"UDP-xylose-core protein beta-D-xylosyltransferase activity","type":"related"},{"name":"peptide O-xylosyltransferase activity","type":"exact"},{"name":"uridine diphosphoxylose-core protein beta-xylosyltransferase activity","type":"related"},{"name":"uridine diphosphoxylose-protein xylosyltransferase activity","type":"related"}],"termid":"GO:0030158"}


id: GO:0031026
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex that possesses glutamate synthase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"oxidoreductase complex","termid":"GO:1990204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"glutamate synthase complex","termid":"GO:0031026"}


id: PBO:0015213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate transmembrane transporter Mpc2 (predicted)","termid":"PBO:0015213"}


id: PBO:0081053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZCCHC10 pseudogene 1","termid":"PBO:0081053"}


id: PATO:0000374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A distance which is greater relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"distance","termid":"PATO:0000040"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased distance","synonyms":[{"name":"long distance","type":"related"}],"termid":"PATO:0000374"}


id: GO:0180056
data:
  {"annotated_genes":["SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114325],"is_not":false,"summary":null,"term":"GO:0180056"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: citrate(out) + 2-oxogluarate(in) = citrate(in) + 2-oxogluarat(out).","definition_xrefs":["PMID:20371607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-ketoglutarate transmembrane transporter activity","termid":"GO:0015139"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"citrate secondary active transmembrane transporter activity","termid":"GO:0071913"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"citrate:2-oxoglutarate antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180056","terms_by_termid":{"GO:0180056":null}}


id: GO:0097530
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a granulocyte within or between different tissues and organs of the body.","definition_xrefs":["PMID:24163421","PMID:24193336","GOC:cvs"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte migration","termid":"GO:0097529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulocyte migration","termid":"GO:0097530"}


id: PBO:0059389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S24","termid":"PBO:0059389"}


id: GO:0004447
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: iodide + H2O2 = iodine + 2 H2O.","definition_xrefs":["RHEA:23336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"haloperoxidase activity","termid":"GO:0140905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"iodide peroxidase activity","secondary_identifiers":["EC:1.11.1.8","MetaCyc:IODIDE-PEROXIDASE-RXN"],"synonyms":[{"name":"TPO activity","type":"related"},{"name":"iodinase activity","type":"related"},{"name":"thyroid peroxidase activity","type":"related"},{"name":"thyroperoxidase activity","type":"related"}],"termid":"GO:0004447"}


id: GO:1990236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the proteasome core complex (AKA core particle (CP)) from the cytoplasm into the nucleus.","definition_xrefs":["GOC:rb","PMID:23982732","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import into nucleus","termid":"GO:0051170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"proteasome core complex import into nucleus","termid":"GO:1990236"}


id: MONDO:0015374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system vasculitis","termid":"MONDO:0003346"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary central nervous system vasculitis","secondary_identifiers":["MESH:D020293","UMLS:C2930862","GARD:8703","MESH:C537295","MEDGEN:419271","Orphanet:140989"],"synonyms":[{"name":"PACNS","type":"exact"},{"name":"PCNSV","type":"exact"},{"name":"granulomatous angiitis of the central nervous system","type":"related"},{"name":"isolated angiitis of the central nervous system","type":"exact"},{"name":"primary CNS vasculitis","type":"related"},{"name":"primary angiitis of the central nervous system","type":"exact"},{"name":"primary central nervous system vasculitis","type":"exact"},{"name":"primary vasculitis of the central nervous system","type":"exact"}],"termid":"MONDO:0015374","xrefs":{"Monarch":{"xref_id":"0015374"}}}


id: PBO:0075518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member A","termid":"PBO:0075518"}


id: GO:0008769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Xaa-His dipeptides.","definition_xrefs":["EC:3.4.13.3"],"gene_count":0,"genotype_count":0,"name":"obsolete X-His dipeptidase activity (obsolete GO:0008769)","synonyms":[{"name":"X-His dipeptidase activity","type":"exact"},{"name":"Xaa-His dipeptidase activity","type":"exact"},{"name":"aminoacyl-histidine dipeptidase activity","type":"related"},{"name":"aminoacylhistidine dipeptidase activity","type":"related"},{"name":"carnosinase activity","type":"related"},{"name":"dipeptidase M","type":"related"},{"name":"homocarnosinase activity","type":"related"}],"termid":"GO:0008769"}


id: SO:0001161
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence element characteristic of some RNA polymerase II promoters, usually located between -60 and -45 relative to the TSS. Consensus sequence is MKSYGGCARCGSYSS. Tends to co-occur with DMv3 (SO:0001160). Tends to not occur with DPE motif (SO:0000015) or MTE (SO:0001162).","definition_xrefs":["PMID:12537576:16827941"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"},{"relation_name":"part_of","term_name":"RNApol_II_promoter","termid":"SO:0000170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMv2_motif","synonyms":[{"name":"DMv2","type":"exact"},{"name":"DMv2 motif","type":"exact"},{"name":"MKSYGGCARCGSYSS","type":"narrow"},{"name":"directional motif v2","type":"exact"},{"name":"promoter motif 8","type":"exact"}],"termid":"SO:0001161"}


id: FYPO:0002146
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to diethyl maleate (DEM) is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA, such as the mRNA transcribed from a gene of interest, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal RNA level during cellular response to DEM","synonyms":[{"name":"normal RNA accumulation during cellular response to DEM","type":"related"},{"name":"normal RNA level during cellular response to DEM during mitotic cell cycle","type":"related"},{"name":"normal RNA level during cellular response to DEM during vegetative growth","type":"exact"},{"name":"normal RNA level during cellular response to diethyl maleate","type":"exact"},{"name":"normal mRNA level during cellular response to DEM","type":"narrow"},{"name":"normal transcript level during cellular response to DEM","type":"exact"}],"termid":"FYPO:0002146"}


id: PBO:0043891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cysteine rich transmembrane BMP regulator 1","termid":"PBO:0043891"}


id: MONDO:0018234
data:
  {"annotated_genes":["SJAG_03484","SJAG_03144","SJAG_00504","SJAG_04825","SJAG_00197","SJAG_02165","SJAG_03578","SJAG_01852","SJAG_04995","SJAG_00539","SJAG_00731","SJAG_00322","SJAG_02200","SJAG_01444","SJAG_00414","SJAG_04270","SJAG_03703","SJAG_04092","SJAG_02431","SJAG_03249"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87099],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014651"},{"annotations":[88122,88123],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013895"},{"annotations":[87588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008726"},{"annotations":[87062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020667"},{"annotations":[86977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014700"},{"annotations":[87411],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014558"},{"annotations":[87518,87517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009039"},{"annotations":[88297,88298],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012137"},{"annotations":[87704,87703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958175"},{"annotations":[88389],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011640"},{"annotations":[88597],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013740"},{"annotations":[87950],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012516"},{"annotations":[87156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007943"},{"annotations":[87381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009903"},{"annotations":[87540,87541],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009955"},{"annotations":[89091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010121"},{"annotations":[89031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013385"},{"annotations":[87658],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009558"},{"annotations":[87334],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030067"}]},"cv_name":"mondo","definition":"A group of disorders in which the skeletal involvement is predominantly manifested as abnormalities of individual bones or in a group of bones.","direct_ancestors":[{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00322":null,"SJAG_00414":null,"SJAG_00504":null,"SJAG_00539":null,"SJAG_00731":null,"SJAG_01444":null,"SJAG_01852":null,"SJAG_02165":null,"SJAG_02200":null,"SJAG_02431":null,"SJAG_03144":null,"SJAG_03249":null,"SJAG_03484":null,"SJAG_03578":null,"SJAG_03703":null,"SJAG_04092":null,"SJAG_04270":null,"SJAG_04825":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dysostosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0013393","DOID:1934","MEDGEN:4430","MESH:D004413","Orphanet:364559","ICD9:756.9","SCTID:109420003","NCIT:C34560","GARD:21571"],"synonyms":[{"name":"dysostosis","type":"exact"}],"termid":"MONDO:0018234","terms_by_termid":{"MONDO:0007943":null,"MONDO:0008726":null,"MONDO:0009039":null,"MONDO:0009558":null,"MONDO:0009903":null,"MONDO:0009955":null,"MONDO:0010121":null,"MONDO:0011640":null,"MONDO:0012137":null,"MONDO:0012516":null,"MONDO:0013385":null,"MONDO:0013740":null,"MONDO:0013895":null,"MONDO:0014558":null,"MONDO:0014651":null,"MONDO:0014700":null,"MONDO:0020667":null,"MONDO:0030067":null,"MONDO:0958175":null},"xrefs":{"Monarch":{"xref_id":"0018234"}}}


id: MONDO:0011135
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superior transverse scapular ligament, calcification of, familial","secondary_identifiers":["MEDGEN:355711","OMIM:601708","UMLS:C1866424","MESH:C566638"],"synonyms":[{"name":"superior transverse scapular ligament, calcification of, familial","type":"exact"}],"termid":"MONDO:0011135","xrefs":{"Monarch":{"xref_id":"0011135"}}}


id: GO:0003372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized cytoskeletal structures that contribute to the cell polarity of a migrating mesendodermal cell.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity involved in gastrulation","termid":"GO:0003380"},{"relation_name":"part_of","term_name":"establishment of cell polarity involved in mesendodermal cell migration","termid":"GO:0003369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0007010","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of cytoskeleton polarity involved in mesendodermal cell migration","termid":"GO:0003372"}


id: MOD:01324
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other -","definition_xrefs":["Unimod:254#H","PubMed:7744761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetaldehyde +26","termid":"MOD:00577"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetaldehyde +26 - site H","synonyms":[{"name":"Acetaldehyde +26","type":"related"},{"name":"Delta:H(2)C(2)","type":"related"}],"termid":"MOD:01324"}


id: MONDO:0004639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fulminating disease of neonates in which there is extensive mucosal ulceration, pseudomembrane formation, submucosal hemorrhage, and necrosis usually of the right colon, cecum, terminal ileum, and appendix, possibly due to perinatal intestinal ischemia and bacterial invasion. Progression can lead to necrosis, perforation and/or scarring of the intestinal tract.","definition_xrefs":["NCIT:C84915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necrotizing enterocolitis","termid":"MONDO:0005313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"perinatal necrotizing enterocolitis","secondary_identifiers":["MEDGEN:906305","SCTID:397729009","DOID:8677","UMLS:C4082937"],"synonyms":[{"name":"enterocolitis necrotizing","type":"broad"},{"name":"enterocolitis, necrotizing","type":"related"},{"name":"necrotizing enterocolitis","type":"broad"},{"name":"necrotizing enterocolitis in fetus or newborn","type":"exact"},{"name":"necrotizing enterocolitis in foetus or newborn","type":"exact"},{"name":"perinatal necrotising enterocolitis","type":"exact"},{"name":"pseudomembranous enterocolitis in newborn","type":"exact"}],"termid":"MONDO:0004639","xrefs":{"Monarch":{"xref_id":"0004639"}}}


id: GO:0033133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hexokinase activity","termid":"GO:1903301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucokinase activity","synonyms":[{"name":"glucokinase activator","type":"narrow"},{"name":"stimulation of glucokinase activity","type":"narrow"},{"name":"up regulation of glucokinase activity","type":"exact"},{"name":"up-regulation of glucokinase activity","type":"exact"},{"name":"upregulation of glucokinase activity","type":"exact"}],"termid":"GO:0033133"}


id: PBO:0080923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 1","termid":"PBO:0080923"}


id: SO:1001254
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is predicted.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"predicted","termid":"SO:0000732"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDS_predicted","synonyms":[{"name":"CDS predicted","type":"exact"}],"termid":"SO:1001254"}


id: PBO:0054180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1554","termid":"PBO:0054180"}


id: PBO:0090724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase (NIM1 family) Cdr1/Nim1","termid":"PBO:0090724"}


id: GO:0006276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The maintenance of the integrity of extrachromosomal plasmid DNA; includes processes that ensure plasmids are retained in the daughter cells after cell division.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasmid maintenance","termid":"GO:0006276"}


id: PR:O94353
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- apq12 gene.","definition_xrefs":["UniProtKB:O94353","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear membrane organization protein apq12 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.04","synonyms":[{"name":"Spom972h-apq12","type":"exact"}],"termid":"PR:O94353"}


id: PR:Q9Y7J5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1778.09 gene.","definition_xrefs":["UniProtKB:Q9Y7J5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C1778.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.09","synonyms":[{"name":"Spom972h-SPBC1778.09","type":"exact"}],"termid":"PR:Q9Y7J5"}


id: GO:0060231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a mesenchymal cell establishes apical/basolateral polarity, forms intercellular adhesive junctions, synthesizes basement membrane components and becomes an epithelial cell.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal to epithelial transition","synonyms":[{"name":"epithelial cell differentiation from mesenchymal cell","type":"exact"},{"name":"mesenchymal-epithelial transition","type":"exact"}],"termid":"GO:0060231"}


id: GO:2000622
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"regulates","term_name":"nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","termid":"GO:0000184"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"regulation of nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","synonyms":[{"name":"regulation of mRNA breakdown, nonsense-mediated decay","type":"exact"},{"name":"regulation of mRNA catabolic process, nonsense-mediated","type":"exact"},{"name":"regulation of mRNA catabolism, nonsense-mediated","type":"exact"},{"name":"regulation of mRNA degradation, nonsense-mediated decay","type":"exact"},{"name":"regulation of nonsense-mediated mRNA decay","type":"exact"},{"name":"regulation of nuclear mRNA catabolic process, nonsense-mediated decay","type":"exact"}],"termid":"GO:2000622"}


id: PATO:0001997
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amount which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"present","termid":"PATO:0000467"},{"relation_name":"is_a","term_name":"decreased quality","termid":"PATO:0002301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased amount","secondary_identifiers":["PATO:0000419","PATO:0000468"],"synonyms":[{"name":"decreased","type":"related"},{"name":"decreased number","type":"exact"},{"name":"present in fewer numbers in organism","type":"exact"},{"name":"reduced","type":"related"},{"name":"subnumerary","type":"related"}],"termid":"PATO:0001997"}


id: PBO:0041979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 22","termid":"PBO:0041979"}


id: MONDO:1011548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Junctionalis epidermolysis bullosa that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa, dog","termid":"MONDO:1010750"},{"relation_name":"is_a","term_name":"junctionalis epidermolysis bullosa , non-human animal","termid":"MONDO:1011426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"junctionalis epidermolysis bullosa, dog","secondary_identifiers":["OMIA:000342-9615"],"termid":"MONDO:1011548","xrefs":{"Monarch":{"xref_id":"1011548"}}}


id: PBO:0034699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocytic docking protein Mso1","termid":"PBO:0034699"}


id: MONDO:0004138
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete maxillary sinus adenoid cystic carcinoma (obsolete MONDO:0004138)","termid":"MONDO:0004138","xrefs":{"Monarch":{"xref_id":"0004138"}}}


id: GO:0008259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta ligand binding to type I receptor (obsolete GO:0008259)","synonyms":[{"name":"TGF-beta ligand binding to type I receptor","type":"exact"},{"name":"TGFbeta ligand binding to type I receptor","type":"exact"},{"name":"transforming growth factor beta ligand binding to type I receptor","type":"exact"}],"termid":"GO:0008259"}


id: PBO:0109517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS p21 protein activator 4E, pseudogene","termid":"PBO:0109517"}


id: GO:0007206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phospholipase C-activating G protein-coupled receptor signaling pathway initiated by glutamate binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah","GOC:dph","GOC:tb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C-activating G protein-coupled receptor signaling pathway","termid":"GO:0007200"},{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor signaling pathway","termid":"GO:0007216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"phospholipase C-activating G protein-coupled glutamate receptor signaling pathway","synonyms":[{"name":"activation of phospholipase C activity by G-protein coupled glutamate receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by metabotropic glutamate receptor signaling pathway","type":"related"},{"name":"activation of phospholipase C activity by metabotropic glutamate receptor signalling pathway","type":"related"},{"name":"metabotropic glutamate receptor, phospholipase C activating pathway","type":"related"},{"name":"phospholipase C-activating G-protein coupled glutamate receptor signaling pathway","type":"related"}],"termid":"GO:0007206"}


id: PBO:0004811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate beta-glucosyltransferase Alg5 (predicted)","termid":"PBO:0004811"}


id: PBO:0120036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S2 OR ribosomal protein S27, zinc-binding domain superfamily (S27-like)","termid":"PBO:0120036"}


id: GO:0018266
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-aspartic acid ethanolamide-linked glycosylphosphatidylinositol (GPI) anchor following hydrolysis of a aspartyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0159"],"gene_count":0,"genotype_count":0,"name":"obsolete GPI anchor biosynthetic process via N-aspartyl-glycosylphosphatidylinositolethanolamine (obsolete GO:0018266)","termid":"GO:0018266"}


id: MONDO:0800181
data:
  {"annotated_genes":["SJAG_02656"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008858"}]},"cv_name":"mondo","definition":"Any primary mitochondrial disease in which the cause of the disease is monoallelic or biallelic variants in the OPA1 gene. While optic atrophy is present in most affected cases, OPA1 is a mitochondrial protein and thus features of this disease include abnormal mitochondrial morphology and multiple mitochondrial DNA deletions, and can affect other organ systems and. Extraocular features can include progressive sensorineural hearing impairment, cognitive impairment, peripheral neuropathy, myopathy, ragged-red muscle fibers, and exercise-induced lactic acidemia, while additional ocular features can include progressive visual loss, central scotoma, and color vision abnormalities.","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"hereditary optic neuropathy","termid":"MONDO:0020249"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02656":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005328","MONDO:0004069"],"is_obsolete":false,"name":"OPA1-related optic atrophy with or without extraocular features","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0800181","terms_by_termid":{"MONDO:0008858":null},"xrefs":{"Monarch":{"xref_id":"0800181"}}}


id: PBO:0109321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Hsp20/Hsp15.8","termid":"PBO:0109321"}


id: GO:0016493
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a C-C chemokine and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:signaling","PMID:8662823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine receptor activity","termid":"GO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"C-C chemokine receptor activity","termid":"GO:0016493"}


id: GO:0021630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the olfactory nerve to attain its fully functional state. The olfactory nerve is a collection of sensory nerve rootlets that extend down from the olfactory bulb to the olfactory mucosa of the upper parts of the nasal cavity. This nerve conducts odor information to the brainstem.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:jid","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve maturation","termid":"GO:0021605"},{"relation_name":"part_of","term_name":"olfactory nerve development","termid":"GO:0021553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"olfactory nerve maturation","synonyms":[{"name":"CN I maturation","type":"exact"}],"termid":"GO:0021630"}


id: GO:0008804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + NH3 + CO2 = ADP + carbamoyl phosphate.","definition_xrefs":["EC:2.7.2.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"carbamate kinase activity","secondary_identifiers":["RHEA:10152","MetaCyc:CARBAMATE-KINASE-RXN"],"synonyms":[{"name":"ATP:carbamate phosphotransferase activity","type":"related"},{"name":"CKase activity","type":"related"},{"name":"carbamoyl phosphokinase activity","type":"related"},{"name":"carbamyl phosphokinase activity","type":"related"}],"termid":"GO:0008804"}


id: GO:0097167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mRNA translation with a regularity of approximately 24 hours.","definition_xrefs":["PMID:17264215","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translation","termid":"GO:0006417"},{"relation_name":"is_a","term_name":"circadian rhythm","termid":"GO:0007623"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"circadian regulation of translation","synonyms":[{"name":"regulation of mRNA translation in response to circadian clock","type":"exact"}],"termid":"GO:0097167"}


id: MONDO:0100331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to a nerve agent or gas.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nerve agent poisoning","termid":"MONDO:0100331","xrefs":{"Monarch":{"xref_id":"0100331"}}}


id: PBO:0047848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(1)(p36)","termid":"PBO:0047848"}


id: PBO:0046694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ethanolamine kinase 2","termid":"PBO:0046694"}


id: GO:0045628
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T-helper 2 cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"is_a","term_name":"regulation of T-helper cell differentiation","termid":"GO:0045622"},{"relation_name":"regulates","term_name":"T-helper 2 cell differentiation","termid":"GO:0045064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T-helper 2 cell differentiation","synonyms":[{"name":"regulation of T-helper 2 cell development","type":"related"}],"termid":"GO:0045628"}


id: GO:0044658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disruption of host plasma membrane integrity by formation of a pore, resulting in deregulated ion homeostasis, and cellular dysfunction that can result in cell death.","definition_xrefs":["GOC:jl","PMID:7510043"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host membrane","termid":"GO:0141171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated pore formation in host plasma membrane","synonyms":[{"name":"pore formation in host plasma membrane","type":"exact"},{"name":"pore formation in membrane of host by symbiont","type":"broad"}],"termid":"GO:0044658"}


id: PBO:0051136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-9","termid":"PBO:0051136"}


id: GO:0017102
data:
  {"annotated_genes":["SJAG_03277","SJAG_02263","SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68628,72240,81904],"is_not":false,"summary":null,"term":"GO:0017102"}]},"cv_name":"cellular_component","definition":"A complex consisting of methionyl- and glutamyl-tRNA synthetases. The tRNA synthetases present in the complex bind to their cognate tRNAs more efficiently than they do as monomers.","definition_xrefs":["GOC:mcc","PMID:11069915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01159":null,"SJAG_02263":null,"SJAG_03277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methionyl glutamyl tRNA synthetase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000117":null},"termid":"GO:0017102","terms_by_termid":{"GO:0017102":null}}


id: PATO:0001053
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An angle which is less than 180 degrees to another entity.","definition_xrefs":["maths.org:maths.org"],"direct_ancestors":[{"relation_name":"is_a","term_name":"angle","termid":"PATO:0002326"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convex angle to","termid":"PATO:0001053"}


id: PBO:0067263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 337, pseudogene","termid":"PBO:0067263"}


id: MONDO:1012751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe skeletal dysplasia characterized by shortened long bones, abnormal vertebrae, depressed nasal bridge, and cleft palate that occurs in pigs due to a mutation in the COL2A1 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:32450343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia, COL2A1-related, pig","secondary_identifiers":["OMIA:001926-9823"],"synonyms":[{"name":"achondrogenesis, type II in Sus scrofa (pig)","type":"related"}],"termid":"MONDO:1012751","xrefs":{"Monarch":{"xref_id":"1012751"}}}


id: GO:0004055
data:
  {"annotated_genes":["SJAG_04577"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72460],"is_not":false,"summary":null,"term":"GO:0004055"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-citrulline + L-aspartate = AMP + diphosphate + (N(omega)-L-arginino)succinate.","definition_xrefs":["EC:6.3.4.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"argininosuccinate synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ARGSUCCINSYN-RXN","Reactome:R-HSA-70577","RHEA:10932"],"synonyms":[{"name":"L-citrulline:L-aspartate ligase (AMP-forming)","type":"related"},{"name":"arginine succinate synthetase activity","type":"related"},{"name":"argininosuccinate synthetase activity","type":"related"},{"name":"argininosuccinic acid synthetase activity","type":"related"},{"name":"arginosuccinate synthetase activity","type":"related"},{"name":"citrulline--aspartate ligase activity","type":"related"}],"termid":"GO:0004055","terms_by_termid":{"GO:0004055":null}}


id: PBO:0110433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 divergent transcript","termid":"PBO:0110433"}


id: GO:0097139
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BID and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["GOC:so","PMID:14634621"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"BID-BCL-2 complex","termid":"GO:0097139"}


id: GO:0060089
data:
  {"annotated_genes":["SJAG_01345","SJAG_02472","SJAG_01978","SJAG_02823","SJAG_02860","SJAG_00318","SJAG_02258","SJAG_00331","SJAG_02847","SJAG_01699","SJAG_06592","SJAG_02080"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[121673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009882"},{"annotations":[117596],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990576"},{"annotations":[70456,79821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009927"},{"annotations":[77338],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004932"},{"annotations":[90151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036320"},{"annotations":[110487],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140897"},{"annotations":[61624,71426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000156"},{"annotations":[107556,76133,74752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0038023"}]},"cv_name":"molecular_function","definition":"A compound molecular function in which an effector function is controlled by one or more regulatory components.","definition_xrefs":["GOC:pdt","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00318":null,"SJAG_00331":null,"SJAG_01345":null,"SJAG_01699":null,"SJAG_01978":null,"SJAG_02080":null,"SJAG_02258":null,"SJAG_02472":null,"SJAG_02823":null,"SJAG_02847":null,"SJAG_02860":null,"SJAG_06592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular transducer activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:23873862":null},"termid":"GO:0060089","terms_by_termid":{"GO:0000156":null,"GO:0004932":null,"GO:0009882":null,"GO:0009927":null,"GO:0036320":null,"GO:0038023":null,"GO:0140897":null,"GO:1990576":null}}


id: GO:1901182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of camalexin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of camalexin biosynthetic process (obsolete GO:1901182)","synonyms":[{"name":"regulation of camalexin anabolism","type":"exact"},{"name":"regulation of camalexin biosynthesis","type":"exact"},{"name":"regulation of camalexin formation","type":"exact"},{"name":"regulation of camalexin synthesis","type":"exact"}],"termid":"GO:1901182"}


id: MOD:01601
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Applied Biosystems iTRAQ8plex-121 reagent derivatized residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter fragment","termid":"MOD:01593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter fragment","synonyms":[{"name":"4-methyl-1-methylidenepiperazin-1-ium","type":"exact"}],"termid":"MOD:01601"}


id: GO:0018574
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,6-dichlorohydroquinone + O2 + H2O = HCl + 2 H+ + 2-chloromaleylacetate.","definition_xrefs":["UM-BBD_enzymeID:e0422"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,6-dichloro-p-hydroquinone 1,2-dioxygenase activity (obsolete GO:0018574)","termid":"GO:0018574"}


id: GO:0006077
data:
  {"annotated_genes":["SJAG_02446","SJAG_02590","SJAG_04073"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64537,77132,78752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006078"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving (1->6)-beta-D-glucans, compounds composed of glucose residues linked by (1->6)-beta-D-glucosidic bonds.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02446":null,"SJAG_02590":null,"SJAG_04073":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"(1->6)-beta-D-glucan metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"1,6-beta-glucan metabolic process","type":"exact"},{"name":"1,6-beta-glucan metabolism","type":"exact"},{"name":"beta-1,6 glucan metabolic process","type":"exact"},{"name":"beta-1,6 glucan metabolism","type":"exact"}],"termid":"GO:0006077","terms_by_termid":{"GO:0006078":null}}


id: GO:0071187
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the cell adhesion molecules protocadherin-alpha-v4 and protocadherin-gamma-b4, and is involved in the regulation of protein localization to the plasma membrane.","definition_xrefs":["PMID:15347688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protocadherin-alpha-protocadherin-gamma complex","termid":"GO:0071183"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"protocadherin-alpha-v4-protocadherin-gamma-b4 complex","synonyms":[{"name":"Pcdhga1-Pcdhgb4 complex","type":"narrow"}],"termid":"GO:0071187"}


id: GO:0060953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to cardiac glial cell fates and their capacity to differentiate into cardiac glial cells.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell fate commitment","termid":"GO:0021781"},{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac glial cell differentiation","termid":"GO:0060950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac glial cell fate commitment","termid":"GO:0060953"}


id: MONDO:0859321
data:
  {"annotated_genes":["SJAG_01490"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87693],"is_not":false,"summary":null,"term":"MONDO:0859321"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01490":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 3 deficiency, nuclear type 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620137","MEDGEN:1824032","UMLS:C5774259"],"termid":"MONDO:0859321","terms_by_termid":{"MONDO:0859321":null},"xrefs":{"Monarch":{"xref_id":"0859321"}}}


id: GO:0035018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to the patterns of cell differentiation that will arise in the chitin-based adult cuticle. An example of this process is adult chitin-based cuticle pattern formation in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle pattern formation","termid":"GO:0035017"},{"relation_name":"part_of","term_name":"adult chitin-based cuticle development","termid":"GO:0008365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult chitin-based cuticle pattern formation","synonyms":[{"name":"adult cuticle pattern formation","type":"broad"}],"termid":"GO:0035018"}


id: MONDO:1012101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic uremic syndrome, non-human animal","termid":"MONDO:1011906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic uremic syndrome, cattle","secondary_identifiers":["OMIA:000435-9913"],"termid":"MONDO:1012101","xrefs":{"Monarch":{"xref_id":"1012101"}}}


id: PR:O94706
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription initiation factor TFIID subunit 8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23307:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription initiation factor TFIID subunit 8 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1259.06","secondary_identifiers":["UniProtKB:O94706"],"synonyms":[{"name":"SPCC1259.06","type":"related"},{"name":"Spom972h-TAF8","type":"exact"},{"name":"TBP-associated factor 8 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94706"}


id: GO:1903387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:21724833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"positively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of homophilic cell adhesion","synonyms":[{"name":"activation of homophilic cell adhesion","type":"narrow"},{"name":"up regulation of homophilic cell adhesion","type":"exact"},{"name":"up-regulation of homophilic cell adhesion","type":"exact"},{"name":"upregulation of homophilic cell adhesion","type":"exact"}],"termid":"GO:1903387"}


id: PR:O13874
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B3.09c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized NOC2 family protein C1B3.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.09c","synonyms":[{"name":"Spom972h-SPAC1B3.09c","type":"exact"}],"termid":"PR:O13874"}


id: PBO:0040731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL6 corepressor","termid":"PBO:0040731"}


id: PBO:0041915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellin 3 precursor","termid":"PBO:0041915"}


id: PBO:0041779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 2","termid":"PBO:0041779"}


id: PBO:0079752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uridine-cytidine kinase 1 like 1","termid":"PBO:0079752"}


id: MONDO:0011746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism, distal, with microdontia, dental pulp stones, and narrowed zygomatic arch","secondary_identifiers":["MEDGEN:376067","MESH:C538148","OMIM:606895","UMLS:C1847185"],"synonyms":[{"name":"distal symphalangism, hypoplastic carpal bones, microdontia, dental pulp stones, and narrowing of the zygomatic arch","type":"related"},{"name":"symphalangism, distal, with microdontia, dental pulp stones, and narrowed zygomatic arch","type":"exact"}],"termid":"MONDO:0011746","xrefs":{"Monarch":{"xref_id":"0011746"}}}


id: MONDO:0012286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked myopathy with excessive autophagy","termid":"MONDO:0010684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, autophagic vacuolar, infantile-onset","secondary_identifiers":["UMLS:C2931230","OMIM:609500","MEDGEN:419364"],"synonyms":[{"name":"myopathy, autophagic vacuolar, infantile-onset","type":"exact"}],"termid":"MONDO:0012286","xrefs":{"Monarch":{"xref_id":"0012286"}}}


id: MONDO:0019917
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Maternal uniparental disomy of chromosome 20 (UPD 20) is a very rare chromosomal anomaly in which both copies of chromosome 20 are inherited from the mother. The main feature described is prenatal and postnatal growth retardation. Microcephaly, minor dysmorphic features and psychomotor developmental delay have been occasionally reported. Maternal UPD20 is most often ascertained by a mosaic trisomy 20 pregnancy.","definition_xrefs":["Orphanet:96186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maternal uniparental disomy of chromosome 20","secondary_identifiers":["MEDGEN:909388","UMLS:C4275029","GARD:16849","OMIM:617352","SCTID:715735007","icd11.foundation:700797720","DOID:0111714"],"synonyms":[{"name":"MBCS","type":"related"},{"name":"MULCHANDANI-BHOJ-CONLIN syndrome","type":"related"},{"name":"UPD(20)mat","type":"exact"},{"name":"maternal UPD(20)","type":"exact"},{"name":"maternal uniparental disomy of chromosome type 20","type":"exact"},{"name":"uniparental disomy, maternal, chromosome 20","type":"related"}],"termid":"MONDO:0019917","xrefs":{"Monarch":{"xref_id":"0019917"}}}


id: PBO:0054236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1618","termid":"PBO:0054236"}


id: PBO:0033780
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_replication_fork_arrest_at_mating-type_locus","termid":"PBO:0033780"}


id: PBO:0086533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; overlaps ORF YEL010W","termid":"PBO:0086533"}


id: PBO:0091281
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HydroxyUrea Sensitive","termid":"PBO:0091281"}


id: GO:1905242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3,3',5-triiodo-L-thyronine stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:21382270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 3,3',5-triiodo-L-thyronine","synonyms":[{"name":"response to Liothyronin","type":"exact"},{"name":"response to Liothyronine","type":"exact"},{"name":"response to Liothyroninum","type":"exact"}],"termid":"GO:1905242"}


id: MONDO:0003226
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Nelson syndrome (obsolete MONDO:0003226)","termid":"MONDO:0003226","xrefs":{"Monarch":{"xref_id":"0003226"}}}


id: GO:0002483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of endogenous origin on its cell surface in association with an MHC protein complex. The peptide is typically a fragment of a larger endogenous protein which has been degraded within the cell.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of endogenous antigen","termid":"GO:0019883"},{"relation_name":"is_a","term_name":"antigen processing and presentation of peptide antigen","termid":"GO:0048002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of endogenous peptide antigen","synonyms":[{"name":"endogenous peptide antigen processing and presentation","type":"exact"}],"termid":"GO:0002483"}


id: MONDO:0007141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete antiviral state repressor, regulator of (obsolete MONDO:0007141)","secondary_identifiers":["OMIM:107440"],"synonyms":[{"name":"AVRR","type":"related"},{"name":"antiviral STATE repressor, regulator OF","type":"related"},{"name":"antiviral state repressor, regulator of","type":"exact"}],"termid":"MONDO:0007141","xrefs":{"Monarch":{"xref_id":"0007141"}}}


id: FYPO:0008353
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UMP 5'-nucleotidase activity is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal 5'-nucleotidase activity","termid":"FYPO:0008349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"abolished UMP 5'-nucleotidase activity","termid":"FYPO:0008353"}


id: PATO:0002386
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape that inheres in the bearer by virtue of the bearer's shape that is wider at one end and narrow in the middle.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anvil","synonyms":[{"name":"anvil shaped","type":"exact"}],"termid":"PATO:0002386"}


id: PBO:0091658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ferric-chelate reductase Frp1","termid":"PBO:0091658"}


id: SO:1000109
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000109 mutation_causing_out_of_frame_polypeptide_C_terminal_elongation (obsolete SO:1000109)","synonyms":[{"name":"mutation causing out of frame polypeptide C terminal elongation","type":"exact"},{"name":"out of frame polypeptide C-terminal elongation","type":"exact"}],"termid":"SO:1000109"}


id: GO:0019898
data:
  {"annotated_genes":["SJAG_00230","SJAG_04642","SJAG_00852","SJAG_02233","SJAG_05398","SJAG_03563","SJAG_00933","SJAG_03456","SJAG_00655","SJAG_04026","SJAG_01876","SJAG_00114","SJAG_02444","SJAG_04860","SJAG_04552","SJAG_03403","SJAG_02605","SJAG_01043","SJAG_02699","SJAG_03081","SJAG_04000","SJAG_00576","SJAG_01249","SJAG_00721","SJAG_01911"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104968],"is_not":false,"summary":null,"term":"GO:0019898"},{"annotations":[112589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031234"},{"annotations":[105775,102475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099616"},{"annotations":[92885,108893,66504,61487,103297,63045,108232,111554,64994,110202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031314"},{"annotations":[109244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031315"},{"annotations":[96631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097629"},{"annotations":[96632],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097632"},{"annotations":[82335,76161,77250,108527],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005834"},{"annotations":[78721,73516,113573,96635,79235],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034271"},{"annotations":[107738,73517,78722,79236],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034272"}]},"cv_name":"cellular_component","definition":"The component of a membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:jl","GOC:dos","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"membrane","termid":"GO:0016020"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00230":null,"SJAG_00576":null,"SJAG_00655":null,"SJAG_00721":null,"SJAG_00852":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01249":null,"SJAG_01876":null,"SJAG_01911":null,"SJAG_02233":null,"SJAG_02444":null,"SJAG_02605":null,"SJAG_02699":null,"SJAG_03081":null,"SJAG_03403":null,"SJAG_03456":null,"SJAG_03563":null,"SJAG_04000":null,"SJAG_04026":null,"SJAG_04552":null,"SJAG_04642":null,"SJAG_04860":null,"SJAG_05398":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0030396","Wikipedia:Peripheral_membrane_protein"],"synonyms":[{"name":"extrinsic to membrane","type":"exact"},{"name":"peripheral membrane protein","type":"exact"}],"termid":"GO:0019898","terms_by_termid":{"GO:0005834":null,"GO:0019898":null,"GO:0031234":null,"GO:0031314":null,"GO:0031315":null,"GO:0034271":null,"GO:0034272":null,"GO:0097629":null,"GO:0097632":null,"GO:0099616":null}}


id: PBO:0059127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-methylpurine DNA glycosylase","termid":"PBO:0059127"}


id: PBO:0077264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein with EGF like and two follistatin like domains 1","termid":"PBO:0077264"}


id: PBO:0086109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for beta-1,6 glucan biosynthesis; mutations result in aberrant morphology and severe growth defects","termid":"PBO:0086109"}


id: PBO:0070813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 43","termid":"PBO:0070813"}


id: PBO:0069252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 507, pseudogene","termid":"PBO:0069252"}


id: GO:0045587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of gamma-delta T cell differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell differentiation","termid":"GO:0045581"},{"relation_name":"is_a","term_name":"regulation of gamma-delta T cell differentiation","termid":"GO:0045586"},{"relation_name":"is_a","term_name":"negative regulation of gamma-delta T cell activation","termid":"GO:0046644"},{"relation_name":"negatively_regulates","term_name":"gamma-delta T cell differentiation","termid":"GO:0042492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of gamma-delta T cell differentiation","synonyms":[{"name":"down regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"down-regulation of gamma-delta T cell differentiation","type":"exact"},{"name":"downregulation of gamma-delta T cell differentiation","type":"exact"},{"name":"inhibition of gamma-delta T cell differentiation","type":"narrow"},{"name":"negative regulation of gamma-delta T cell development","type":"related"},{"name":"negative regulation of gamma-delta T lymphocyte differentiation","type":"exact"},{"name":"negative regulation of gamma-delta T-cell differentiation","type":"exact"},{"name":"negative regulation of gamma-delta T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0045587"}


id: MONDO:1011127
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Testicular regression syndrome that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular regression syndrome, non-human animal","termid":"MONDO:1010281"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular regression syndrome, horse","secondary_identifiers":["OMIA:001535-9796"],"termid":"MONDO:1011127","xrefs":{"Monarch":{"xref_id":"1011127"}}}


id: PBO:0073547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and multiple ankyrin repeat domains 1","termid":"PBO:0073547"}


id: PBO:0065632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN11 pseudogene 1","termid":"PBO:0065632"}


id: GO:0098869
data:
  {"annotated_genes":["SJAG_04632","SJAG_03303","SJAG_01216","SJAG_02630","SJAG_01734","SJAG_00489","SJAG_05181","SJAG_04788","SJAG_03653","SJAG_03623","SJAG_01162","SJAG_04823","SJAG_03166","SJAG_00141","SJAG_04953","SJAG_04125","SJAG_00668","SJAG_04399","SJAG_02515","SJAG_04403","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57955,64987,66758,69909,70529,108829],"is_not":false,"summary":null,"term":"GO:0098869"},{"annotations":[102020,120372,119435,97210,110875,107075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061692"},{"annotations":[66470,76165,90988,95146,101286,58702,61850,70647,91412],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"Any process carried out at the cellular level that reduces or removes the toxicity superoxide radicals or hydrogen peroxide.","definition_xrefs":["GOC:vw","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular detoxification","termid":"GO:1990748"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_00489":null,"SJAG_00668":null,"SJAG_01162":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_01734":null,"SJAG_02515":null,"SJAG_02630":null,"SJAG_03166":null,"SJAG_03303":null,"SJAG_03623":null,"SJAG_03653":null,"SJAG_04125":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_04823":null,"SJAG_04953":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150"],"is_obsolete":false,"name":"cellular oxidant detoxification","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0098869","terms_by_termid":{"GO:0019430":null,"GO:0061692":null,"GO:0098869":null}}


id: PBO:0069261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 517, pseudogene","termid":"PBO:0069261"}


id: PBO:0080562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WBP11 pseudogene 2","termid":"PBO:0080562"}


id: PBO:0055505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2939","termid":"PBO:0055505"}


id: GO:0072383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a vesicle towards the plus end of a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle transport along microtubule","termid":"GO:0047496"},{"relation_name":"is_a","term_name":"plus-end-directed organelle transport along microtubule","termid":"GO:0072386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"plus-end-directed vesicle transport along microtubule","synonyms":[{"name":"microtubule plus-end-directed vesicle distribution","type":"narrow"},{"name":"microtubule plus-end-directed vesicle localization","type":"exact"}],"termid":"GO:0072383"}


id: MONDO:0009097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive form of persistent hyperplastic primary vitreous.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"persistent hyperplastic primary vitreous","termid":"MONDO:0019631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025","MONDO:0002320"],"is_obsolete":false,"name":"persistent hyperplastic primary vitreous, autosomal recessive","secondary_identifiers":["OMIM:221900","Orphanet:300337","UMLS:C1969783","MESH:C566966","MEDGEN:370100","GARD:18167"],"synonyms":[{"name":"PHPVAR","type":"related"},{"name":"autosomal recessive persistent hyperplastic primary vitreous","type":"exact"},{"name":"persistent fetal vasculature","type":"related"},{"name":"persistent foetal vasculature","type":"related"},{"name":"persistent hyperplastic primary vitreous, autosomal recessive","type":"exact"},{"name":"retinal nonattachment and falciform detachment","type":"related"},{"name":"retinal nonattachment, nonsyndromic congenital","type":"related"}],"termid":"MONDO:0009097","xrefs":{"Monarch":{"xref_id":"0009097"}}}


id: PBO:0089557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic tetraspan protein, claudin Dni2","termid":"PBO:0089557"}


id: GO:0050654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving chondroitin sulfate proteoglycans, which consist of a core protein linked to a chondroitin sulfate glycosaminoglycan. The chondroitin sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-D-glucuronic acid-beta-(1,3)-N-acetyl-D-galactosamine, the latter of which can be O-sulfated.","definition_xrefs":["PMID:17239763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan metabolic process","termid":"GO:0006029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondroitin sulfate proteoglycan metabolic process","synonyms":[{"name":"chondroitin sulfate proteoglycan metabolism","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolic process","type":"exact"},{"name":"chondroitin sulphate proteoglycan metabolism","type":"exact"}],"termid":"GO:0050654"}


id: GO:0140410
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: monoatomic cation(out) + HCO3-(out) = monoatomic cation(in) + HCO3-(in).","definition_xrefs":["PMID:27166256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bicarbonate transmembrane transporter activity","termid":"GO:0015106"},{"relation_name":"is_a","term_name":"solute:monoatomic cation symporter activity","termid":"GO:0015294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"monoatomic cation:bicarbonate symporter activity","synonyms":[{"name":"monoatomic cation:hydrogencarbonate symporter activity","type":"exact"},{"name":"solute:bicarbonate symporter activity","type":"broad"}],"termid":"GO:0140410"}


id: GO:0039561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the activity of host IRF9 (interferon regulatory factor-9) by promoting the nuclear accumulation of IRF9. For example, the reovirus mu2 protein promotes nuclear accumulation of host IRF9 by an as yet unconfirmed-mechanism.","definition_xrefs":["PMID:19109390"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host IRF9 activity by positive regulation of IRF9 localization to nucleus (obsolete GO:0039561)","synonyms":[{"name":"suppression by virus of host IRF9 activity by nuclear localization of IRF9","type":"related"},{"name":"suppression of interferon signaling by nuclear accumulation of IRF9","type":"related"}],"termid":"GO:0039561"}


id: MONDO:0030938
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 52","secondary_identifiers":["GARD:16436","MEDGEN:1785685","OMIM:619202","UMLS:C5543094","DOID:0112270"],"synonyms":[{"name":"SPGF52","type":"exact"},{"name":"spermatogenic failure 52","type":"exact"}],"termid":"MONDO:0030938","xrefs":{"Monarch":{"xref_id":"0030938"}}}


id: GO:0075243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which male and female gametangia develop and fuse to form an oospore, a thick-walled resting spore of Oomycetes and certain algae and fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"oospore formation","termid":"GO:0075243"}


id: GO:1903924
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to estradiol.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:9048584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid binding","termid":"GO:0005496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0008289","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"estradiol binding","termid":"GO:1903924"}


id: PBO:0073522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding protein 5","termid":"PBO:0073522"}


id: MONDO:0003088
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from skeletal muscle.","definition_xrefs":["NCIT:C3699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deep hemangioma","termid":"MONDO:0003096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intramuscular hemangioma","secondary_identifiers":["DOID:468","MEDGEN:61450","ICDO:9132/0","UMLS:C0205789"],"synonyms":[{"name":"intramuscular angioma","type":"exact"},{"name":"intramuscular hemangioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003088","xrefs":{"Monarch":{"xref_id":"0003088"}}}


id: PBO:0075454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 5 like 1","termid":"PBO:0075454"}


id: PBO:0017078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR10","termid":"PBO:0017078"}


id: MONDO:0044308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"BBS21 is an autosomal recessive ciliopathy characterized by obesity, postaxial polydactyly, retinal degeneration, and mild cognitive impairment ({1:Heon et al., 2016}; {2:Khan et al., 2016}).nnFor a general phenotypic description and a discussion of genetic heterogeneity of Bardet-Biedl syndrome, see BBS1 (OMIM:209900).","definition_xrefs":["OMIM:617406"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"bardet-biedl syndrome 21","secondary_identifiers":["DOID:0081010","GARD:16226","MEDGEN:1374358","UMLS:C4319932"],"synonyms":[{"name":"BBS21","type":"related"},{"name":"Bardet-Biedl syndrome 21","type":"related"}],"termid":"MONDO:0044308","xrefs":{"Monarch":{"xref_id":"0044308"}}}


id: GO:0072064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the long descending thin limb over time, from its formation to the mature structure. The long descending thin limb is the descending thin limb of a long nephron that has a squamous epithelial morphology. The long descending limb starts in the inner stripe of the outer medulla and extends into the inner medulla.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephron epithelium development","termid":"GO:0072009"},{"relation_name":"is_a","term_name":"descending thin limb development","termid":"GO:0072022"},{"relation_name":"part_of","term_name":"long nephron development","termid":"GO:0072029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"long descending thin limb development","termid":"GO:0072064"}


id: PR:Q7LL15
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sus1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LL15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription and mRNA export factor sus1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC6B1.12c","synonyms":[{"name":"Spom972h-sus1","type":"exact"}],"termid":"PR:Q7LL15"}


id: MONDO:0017340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile nasopharyngeal angiofibroma (JNA) is a rare and benign but locally aggressive fibrovascular tumor arising from the posterolateral wall of the nasopharynx, which affects mainly young and adolescent males (onset usually occurring between 7-19 years of age) and that presents as a mass in the nasopharynx and nasal cavity, leading to manifestations such as nasal obstruction, epistaxis, profound facial swelling, proptosis or diplopia. Although slowly progressive, it has a high rate of recurrence and sometimes invades adjacent structures.","definition_xrefs":["Orphanet:289596"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck neoplasm","termid":"MONDO:0005586"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease","termid":"MONDO:0024623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"juvenile nasopharyngeal angiofibroma","secondary_identifiers":["GARD:21144","ICD10CM:D10.6","UMLS:C1367536","HP:0030429","MEDGEN:237137","NCIT:C27479","SCTID:716590006"],"synonyms":[{"name":"JNA","type":"exact"},{"name":"juvenile nasopharyngeal angiofibroma","type":"exact"},{"name":"juvenile nasopharyngeal angiofibroma (disease)","type":"exact"},{"name":"nasopharyngeal angiofibroma","type":"exact"},{"name":"nasopharyngeal juvenile angiofibroma","type":"exact"}],"termid":"MONDO:0017340","xrefs":{"Monarch":{"xref_id":"0017340"}}}


id: PBO:0073017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synthesis of cytochrome C oxidase 1","termid":"PBO:0073017"}


id: FYPO:0005866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of lysine at position 9 of histone H3 at ribosomal DNA is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation during vegetative growth","termid":"FYPO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at rDNA during vegetative growth","synonyms":[{"name":"normal histone H3-K9 methylation at rDNA during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"normal histone H3K9me at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005866"}


id: MONDO:0030747
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa, junctional 2B, severe","secondary_identifiers":["UMLS:C5676937","OMIM:619784","MEDGEN:1805467"],"synonyms":[{"name":"JEB2B","type":"exact"},{"name":"epidermolysis bullosa, junctional 2B, generalised severe","type":"exact"},{"name":"epidermolysis bullosa, junctional 2B, generalized severe","type":"exact"},{"name":"epidermolysis bullosa, junctional 2B, herlitz IIA","type":"exact"},{"name":"epidermolysis bullosa, junctional 2B, severe","type":"exact"}],"termid":"MONDO:0030747","xrefs":{"Monarch":{"xref_id":"0030747"}}}


id: MONDO:0044792
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88781],"is_not":false,"summary":null,"term":"MONDO:0044792"}]},"cv_name":"mondo","definition":"A large, or giant, congenital melanocytic nevus (LCMN or GCMN) is a pigmented skin lesion of more than 20 cm - or 40 cm- respectively, projected adult diameter, composed of melanocytes, and presenting with an elevated risk of malignant transformation.","definition_xrefs":["Orphanet:626"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"large congenital melanocytic nevus","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:398696001","UMLS:C1842036","NCIT:C3944","ICDO:8761/1","NCIT:C4234","DOID:0111359","OMIM:137550","GARD:2469","icd11.foundation:618273329","MEDGEN:330752","SCTID:254815002","NORD:1184","MedDRA:10072036","ONCOTREE:SKCN"],"synonyms":[{"name":"CMNS","type":"related"},{"name":"GMN","type":"exact"},{"name":"GPHN","type":"related"},{"name":"Giant Congenital Melanocytic Nevus","type":"exact"},{"name":"LCMN","type":"exact"},{"name":"bathing trunk nevus","type":"exact"},{"name":"congenital giant pigmented nevus","type":"related"},{"name":"congenital hairy nevus","type":"related"},{"name":"congenital melanocytic nevi","type":"exact"},{"name":"congenital melanocytic nevus","type":"exact"},{"name":"congenital melanocytic nevus of skin","type":"exact"},{"name":"congenital melanocytic nevus of the skin","type":"exact"},{"name":"congenital nevus","type":"related"},{"name":"congenital nevus of skin","type":"exact"},{"name":"congenital nevus of the skin","type":"exact"},{"name":"congenital pigmented melanocytic Nevus","type":"exact"},{"name":"congenital pigmented nevus","type":"exact"},{"name":"congenital pigmented nevus of skin","type":"exact"},{"name":"congenital pigmented nevus of the skin","type":"exact"},{"name":"congenital pigmented skin nevus","type":"exact"},{"name":"congenital skin nevus","type":"exact"},{"name":"giant congenital melanocytic nevus","type":"related"},{"name":"giant congenital nevus","type":"exact"},{"name":"giant congenital pigmented Nevus","type":"related"},{"name":"giant hairy nevus","type":"related"},{"name":"giant pigmented hairy nevus","type":"exact"},{"name":"giant pigmented nevus","type":"related"},{"name":"giant pigmented nevus of skin","type":"exact"},{"name":"giant pigmented nevus of the skin","type":"exact"},{"name":"large congenital melanocytic nevus","type":"exact"},{"name":"melanocytic nevus syndrome, congenital","type":"related"},{"name":"melanocytic nevus syndrome, congenital, somatic","type":"exact"},{"name":"nevus spilus","type":"related"},{"name":"pigmented moles","type":"related"},{"name":"spitz nevus","type":"related"},{"name":"spitz nevus or nevus spilus, somatic","type":"exact"}],"termid":"MONDO:0044792","terms_by_termid":{"MONDO:0044792":null},"xrefs":{"Monarch":{"xref_id":"0044792"}}}


id: GO:0007525
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the somatic muscle over time, from its formation to the mature structure. Somatic muscles are striated muscle structures that connect to the exoskeleton or cuticle.","definition_xrefs":["GOC:jid","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle structure development","termid":"GO:0061061"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic muscle development","termid":"GO:0007525"}


id: PBO:0040341
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit e","termid":"PBO:0040341"}


id: SO:0001389
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified aspartic acid amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_aspartic_acid","secondary_identifiers":["MOD:00904"],"synonyms":[{"name":"ModAsp","type":"exact"},{"name":"modified L aspartic acid","type":"exact"},{"name":"modified L-aspartic acid","type":"exact"}],"termid":"SO:0001389"}


id: PBO:0052160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 8","termid":"PBO:0052160"}


id: MONDO:0012858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial hemolytic anemia","termid":"MONDO:0003689"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0005244"],"is_obsolete":false,"name":"primary CD59 deficiency","secondary_identifiers":["Orphanet:169464","UMLS:C2676767","MESH:C567355","GARD:17054","MEDGEN:393582","NANDO:2200804","OMIM:612300"],"synonyms":[{"name":"CD59 deficiency","type":"related"},{"name":"HACD59","type":"related"},{"name":"hemolytic anemia, CD59-mediated, with or without immune-mediated polyneuropathy","type":"related"},{"name":"primary CD59 deficiency","type":"exact"}],"termid":"MONDO:0012858","xrefs":{"Monarch":{"xref_id":"0012858"}}}


id: PBO:0066139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RB1 divergent transcript","termid":"PBO:0066139"}


id: GO:0032267
data:
  {"annotated_genes":["SJAG_05249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66830],"is_not":false,"summary":null,"term":"GO:0032267"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + cytidine(34) in tRNA(Ile2) + L-lysine = AMP + diphosphate + H+ + lysidine(34) in tRNA(Ile2). This modification converts both the codon specificity of tRNA(Ile) from AUG to AUA and its amino acid specificity from methionine to isoleucine.","definition_xrefs":["PMID:14527414","RHEA:43744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-nitrogen bonds","termid":"GO:0016879"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674","GO:0016874","GO:0140101"],"is_obsolete":false,"name":"tRNA(Ile)-lysidine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["EC:6.3.4.19"],"synonyms":[{"name":"tRNA(Ile)-2-lysyl-cytidine synthase activity","type":"exact"},{"name":"tRNA(Ile)-lysidine synthetase activity","type":"exact"}],"termid":"GO:0032267","terms_by_termid":{"GO:0032267":null}}


id: GO:1905152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated sodium channel activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:24198377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of voltage-gated sodium channel activity","termid":"GO:1905150"},{"relation_name":"is_a","term_name":"positive regulation of sodium ion transmembrane transporter activity","termid":"GO:2000651"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of voltage-gated sodium channel activity","synonyms":[{"name":"activation of voltage gated sodium channel activity","type":"narrow"},{"name":"activation of voltage-dependent sodium channel activity","type":"narrow"},{"name":"activation of voltage-gated sodium channel activity","type":"narrow"},{"name":"activation of voltage-gated sodium ion channel activity","type":"narrow"},{"name":"activation of voltage-sensitive sodium channel","type":"narrow"},{"name":"positive regulation of voltage gated sodium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"up regulation of voltage gated sodium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"up regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"up regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"up-regulation of voltage gated sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated sodium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive sodium channel","type":"exact"},{"name":"upregulation of voltage gated sodium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent sodium channel activity","type":"exact"},{"name":"upregulation of voltage-gated sodium channel activity","type":"exact"},{"name":"upregulation of voltage-gated sodium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive sodium channel","type":"exact"}],"termid":"GO:1905152"}


id: FYPO:0008278
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 5-diphospho-1D-myo-inositol 1,2,3,4,6-pentakisphosphate (5-IP7) is higher than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular myo-inositol level","termid":"FYPO:0006950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 5-IP7 level","termid":"FYPO:0008278"}


id: PR:P42656
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rad24 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P42656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA damage checkpoint protein rad24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC8E11.02c","synonyms":[{"name":"Spom972h-rad24","type":"exact"}],"termid":"PR:P42656"}


id: PBO:0053121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 12","termid":"PBO:0053121"}


id: MONDO:0017392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pre-Descemet corneal dystrophy (PDCD) is a rare form of stromal corneal dystrophy characterized by focal, fine, gray opacities in the deep stroma immediately anterior to the Descemet membrane, with no effect on vision.","definition_xrefs":["Orphanet:293462"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stromal corneal dystrophy","termid":"MONDO:0020213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"pre-descemet corneal dystrophy","secondary_identifiers":["GARD:21168","ICD9:371.56","MEDGEN:573065","icd11.foundation:2027634766","SCTID:231934009","UMLS:C0339282"],"synonyms":[{"name":"PDCD","type":"exact"}],"termid":"MONDO:0017392","xrefs":{"Monarch":{"xref_id":"0017392"}}}


id: PBO:0051961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor interacting protein","termid":"PBO:0051961"}


id: MOD:00229
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts two L-cysteine residues to form alpha-1-microglobulin-Ig alpha complex chromophore.","definition_xrefs":["PubMed:11877257","PubMed:7506257","PubMed:7535251","RESID:AA0224","PubMed:11058759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"alpha-1-microglobulin-Ig alpha complex chromophore","synonyms":[{"name":"BINDING Multimeric 3-hydroxykynurenine chromophore (covalent)","type":"exact"},{"name":"alpha-1-microglobulin-Ig alpha complex chromophore","type":"exact"}],"termid":"MOD:00229"}


id: PBO:0064482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase iota","termid":"PBO:0064482"}


id: RO:0001015
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"a relation between two independent continuants, the location and the target, in which the target is entirely within the location","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"location_of","termid":"RO:0001015"}


id: GO:0044608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a C-terminal peptidyl-threonine to form peptidyl-L-threonine methyl ester.","definition_xrefs":["RESID:AA0507"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-L-threonine methyl ester biosynthetic process from peptidyl-threonine (obsolete GO:0044608)","synonyms":[{"name":"peptidyl-threonine esterification","type":"exact"}],"termid":"GO:0044608"}


id: GO:1903399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of m7G(5')pppN diphosphatase activity.","definition_xrefs":["GO_REF:0000059","PMID:22323607","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of m7G(5')pppN diphosphatase activity (obsolete GO:1903399)","synonyms":[{"name":"activation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"narrow"},{"name":"activation of M(7)G(5')pppN pyrophosphatase activity","type":"narrow"},{"name":"activation of decapase activity","type":"related"},{"name":"activation of m7G(5')pppN diphosphatase activity","type":"narrow"},{"name":"activation of m7G(5')pppN pyrophosphatase activity","type":"narrow"},{"name":"positive regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"positive regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"positive regulation of decapase activity","type":"related"},{"name":"positive regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"up regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up regulation of decapase activity","type":"related"},{"name":"up regulation of m7G(5')pppN diphosphatase activity","type":"exact"},{"name":"up regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up-regulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"up-regulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"up-regulation of decapase activity","type":"related"},{"name":"up-regulation of m7G(5')pppN diphosphatase activity","type":"exact"},{"name":"up-regulation of m7G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"upregulation of 7-methylguanosine-5'-triphospho-5'-polynucleotide 7-methylguanosine-5'-phosphohydrolase activity","type":"exact"},{"name":"upregulation of M(7)G(5')pppN pyrophosphatase activity","type":"exact"},{"name":"upregulation of decapase activity","type":"related"},{"name":"upregulation of m7G(5')pppN diphosphatase activity","type":"exact"},{"name":"upregulation of m7G(5')pppN pyrophosphatase activity","type":"exact"}],"termid":"GO:1903399"}


