# terms

id: PBO:0048088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin light chain pseudogene 9","termid":"PBO:0048088"}


id: PBO:0071683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 15","termid":"PBO:0071683"}


id: GO:0140749
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phlorizin + H2O = beta-D-glucose + phloretin.","definition_xrefs":["PMID:9762914","RHEA:69639"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"phlorizin hydrolase activity","termid":"GO:0140749"}


id: GO:0030442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of MAPK during sporulation (sensu Fungi) (obsolete GO:0030442)","synonyms":[{"name":"inactivation of MAPK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030442"}


id: PBO:0075312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 5 pseudogene 4","termid":"PBO:0075312"}


id: PBO:0053363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 272","termid":"PBO:0053363"}


id: MONDO:0002794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma arising from the brain, occurring in adults.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult cerebellar neoplasm","termid":"MONDO:0003260"},{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult medulloblastoma","secondary_identifiers":["UMLS:C0278876","MEDGEN:78898","DOID:3864","NCIT:C4011","NANDO:2200090"],"synonyms":[{"name":"adult brain medulloblastoma","type":"exact"},{"name":"medulloblastoma","type":"broad"},{"name":"medulloblastoma of adults","type":"exact"}],"termid":"MONDO:0002794","xrefs":{"Monarch":{"xref_id":"0002794"}}}


id: PBO:0043282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member F","termid":"PBO:0043282"}


id: GO:0035747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a natural killer cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["CL:0000623","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte chemotaxis","termid":"GO:0048247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"natural killer cell chemotaxis","termid":"GO:0035747"}


id: MONDO:0016539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of hypotonia-cystinuria syndrome characterized by mild to moderate intellectual disability in addition to classic hypotonia-cystinuria syndrome phenotype (cystinuria type 1, generalized hypotonia, poor feeding, growth retardation, and minor facial dysmorphism).","definition_xrefs":["Orphanet:238523"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotonia-cystinuria syndrome","termid":"MONDO:0011669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"atypical hypotonia-cystinuria syndrome","secondary_identifiers":["icd11.foundation:1982772708","MEDGEN:1668791","UMLS:C4755274","GARD:17175"],"synonyms":[{"name":"atypical HCS","type":"exact"}],"termid":"MONDO:0016539","xrefs":{"Monarch":{"xref_id":"0016539"}}}


id: MOD:00039
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline","definition_xrefs":["PubMed:2400108","PubMed:3734192","PubMed:11292863","RESID:AA0030","ChEBI:18095"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated proline","termid":"MOD:01024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-L-proline","synonyms":[{"name":"(2S,4R)-4-hydroxypyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-hydroxy-L-proline","type":"exact"},{"name":"4-hydroxylated L-proline","type":"exact"},{"name":"4-hydroxyproline","type":"exact"},{"name":"4-trans-hydroxy-L-proline","type":"exact"},{"name":"4HyPro","type":"exact"},{"name":"L-threo-4-hydroxyproline","type":"exact"},{"name":"MOD_RES 4-hydroxyproline","type":"exact"},{"name":"gamma-hydroxypyrrolidine-alpha-carboxylic acid","type":"exact"}],"termid":"MOD:00039"}


id: PBO:0084466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase-responsive inhibitor of the Ste12p transcription factor; involved in the regulation of mating-specific genes and the invasive growth pathway; related regulators Dig1p and Dig2p bind to Ste12p; DIG2 has a paralog, DIG1, that arose from the whole genome duplication","termid":"PBO:0084466"}


id: PBO:0034431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-T-shaped_cell_during_G0_to_G1_transition","termid":"PBO:0034431"}


id: PBO:0057634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1224","termid":"PBO:0057634"}


id: PBO:0090233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-BAR domain protein Cdc15","termid":"PBO:0090233"}


id: PBO:0059465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mutS homolog 4","termid":"PBO:0059465"}


id: PBO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M20 protein","termid":"PBO:0004987"}


id: GO:1900365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA polyadenylation.","definition_xrefs":["PMID:15121841","GOC:se","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA polyadenylation (obsolete GO:1900365)","synonyms":[{"name":"activation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"activation of mRNA polyadenylation","type":"narrow"},{"name":"activation of mRNA polyadenylylation","type":"narrow"},{"name":"positive regulation of cleavage and polyadenylylation specificity factor activity","type":"narrow"},{"name":"positive regulation of mRNA polyadenylylation","type":"exact"}],"termid":"GO:1900365"}


id: PBO:0080620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 59","termid":"PBO:0080620"}


id: PBO:0042763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 57","termid":"PBO:0042763"}


id: GO:1900465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of cellular arginine catabolic process by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8455631","GOC:TermGenie","GOC:dgf","PMID:19233144"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of arginine catabolic process by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900465)","synonyms":[{"name":"negative regulation of arginine breakdown by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of arginine catabolism by negative regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of arginine degradation by negative regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1900465"}


id: PBO:0066321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBX1 pseudogene 1","termid":"PBO:0066321"}


id: PBO:0069789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1075, pseudogene","termid":"PBO:0069789"}


id: PBO:0081921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 890, pseudogene","termid":"PBO:0081921"}


id: PBO:0011960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase allele types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wild_type","termid":"PBO:0011960"}


id: PBO:0039931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGEF35 antisense RNA 1","termid":"PBO:0039931"}


id: PBO:0074235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 48 member 1","termid":"PBO:0074235"}


id: PBO:0058492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5687","termid":"PBO:0058492"}


id: MONDO:0001153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A marked difference between the individual's expressed/experienced gender and the gender others would assign him or her, and it must continue for at least six months. (from DSM-5)","definition_xrefs":["MESH:D000068116"],"gene_count":0,"genotype_count":0,"name":"obsolete gender dysphoria (obsolete MONDO:0001153)","secondary_identifiers":["Orphanet:459690","ICD9:302.50","SCTID:93461009","DOID:10919"],"synonyms":[{"name":"transsexualism","type":"related"}],"termid":"MONDO:0001153","xrefs":{"Monarch":{"xref_id":"0001153"}}}


id: PBO:0078451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 4","termid":"PBO:0078451"}


id: MONDO:0014674
data:
  {"annotated_genes":["SJAG_03247"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89276],"is_not":false,"summary":null,"term":"MONDO:0014674"}]},"cv_name":"mondo","definition":"Any maturity-onset diabetes of the young in which the cause of the disease is a mutation in the APPL1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity-onset diabetes of the young","termid":"MONDO:0018911"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03247":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005015"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0019254"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0037792","MONDO:0004335","MONDO:0005015","MONDO:0005066"],"is_obsolete":false,"name":"maturity-onset diabetes of the young type 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16128","MEDGEN:908119","OMIM:616511","DOID:0111111","UMLS:C4225299"],"synonyms":[{"name":"APPL1 maturity-onset diabetes of the young (disease)","type":"exact"},{"name":"MODY14","type":"exact"},{"name":"maturity-onset diabetes of the young (disease) caused by mutation in APPL1","type":"exact"},{"name":"maturity-onset diabetes of the young, type 14","type":"related"}],"termid":"MONDO:0014674","terms_by_termid":{"MONDO:0014674":null},"xrefs":{"Monarch":{"xref_id":"0014674"}}}


id: MONDO:0003458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually polypoid, benign neoplasm that arises from the endometrial cavity. It is characterized by the presence of a mesenchymal core component and an epithelial component that forms a lining on the mesenchymal core.","definition_xrefs":["NCIT:C6337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenofibroma","termid":"MONDO:0006071"},{"relation_name":"is_a","term_name":"benign neoplasm of corpus uteri","termid":"MONDO:0021525"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine corpus adenofibroma","secondary_identifiers":["MEDGEN:277849","DOID:5475","UMLS:C1336901"],"synonyms":[{"name":"adenofibroma of body of uterus","type":"exact"},{"name":"adenofibroma of corpus uteri","type":"exact"},{"name":"adenofibroma of the body of uterus","type":"exact"},{"name":"adenofibroma of the corpus uteri","type":"exact"},{"name":"adenofibroma of the uterine body","type":"exact"},{"name":"adenofibroma of the uterine corpus","type":"exact"},{"name":"adenofibroma of uterine body","type":"exact"},{"name":"adenofibroma of uterine corpus","type":"related"},{"name":"body of uterus adenofibroma","type":"exact"},{"name":"corpus uteri adenofibroma","type":"exact"},{"name":"uterine body adenofibroma","type":"exact"}],"termid":"MONDO:0003458","xrefs":{"Monarch":{"xref_id":"0003458"}}}


id: GO:0031851
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a kappa-type opioid receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opioid receptor binding","termid":"GO:0031628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"kappa-type opioid receptor binding","synonyms":[{"name":"dynorphin receptor binding","type":"related"},{"name":"kappa-type opioid receptor ligand","type":"narrow"}],"termid":"GO:0031851"}


id: MONDO:0020863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the larynx by Corynebacterium diphtheriae.","definition_xrefs":["NCIT:C34546"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"diphtheria","termid":"MONDO:0005504"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal diphtheria","secondary_identifiers":["UMLS:C0012557","ICD10CM:A36.2","MEDGEN:4336","ICD9:032.3","icd11.foundation:1101542926","SCTID:50215002"],"synonyms":[{"name":"Diphtheritic laryngotracheitis","type":"related"},{"name":"Laryngeal Diphtheria","type":"related"},{"name":"Laryngeal diphtheria","type":"related"},{"name":"diphtheritic laryngotracheitis","type":"related"},{"name":"laryngeal diphtheria","type":"exact"}],"termid":"MONDO:0020863","xrefs":{"Monarch":{"xref_id":"0020863"}}}


id: PBO:0043056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin polymerizing factor 2","termid":"PBO:0043056"}


id: MONDO:0017672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary palmoplantar keratoderma","termid":"MONDO:0019272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"focal palmoplantar keratoderma","secondary_identifiers":["UMLS:C2931923","icd11.foundation:1676945961","GARD:21294","MEDGEN:419939","Orphanet:307837"],"synonyms":[{"name":"focal PPK","type":"exact"},{"name":"focal keratosis palmoplantaris","type":"exact"},{"name":"focal palmoplantar hyperkeratosis","type":"exact"}],"termid":"MONDO:0017672","xrefs":{"Monarch":{"xref_id":"0017672"}}}


id: GO:0060748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The branching process in which the mammary gland ducts form tertiary branches off of the secondary branches as part of diestrus and pregnancy.","definition_xrefs":["GOC:dph","PMID:18614704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"mammary gland branching involved in pregnancy","termid":"GO:0060745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tertiary branching involved in mammary gland duct morphogenesis","termid":"GO:0060748"}


id: CHEBI:48828
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cobalt(2+)","termid":"CHEBI:48828"}


id: GO:0003715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any activity that brings about termination of transcription.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription termination factor activity (obsolete GO:0003715)","synonyms":[{"name":"transcription termination factor activity","type":"exact"},{"name":"transcriptional termination factor activity","type":"exact"}],"termid":"GO:0003715"}


id: MONDO:0013851
data:
  {"annotated_genes":["SJAG_01840"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88288],"is_not":false,"summary":null,"term":"MONDO:0013851"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"},{"relation_name":"is_a","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"autosomal dominant aplasia and myelodysplasia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614675","UMLS:C3808553","Orphanet:314399","GARD:17420","MEDGEN:814883","NANDO:1200301"],"synonyms":[{"name":"BMFS1","type":"related"},{"name":"autosomal dominant aplastic anaemia and myelodysplasia","type":"exact"},{"name":"autosomal dominant aplastic anemia and myelodysplasia","type":"exact"},{"name":"bone marrow failure syndrome 1","type":"related"},{"name":"bone marrow failure syndrome type 1","type":"exact"}],"termid":"MONDO:0013851","terms_by_termid":{"MONDO:0013851":null},"xrefs":{"Monarch":{"xref_id":"0013851"}}}


id: FYPO:0007657
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to linear elements is decreased at one or more meiotic recombination hotspots.","definition_xrefs":["PMID:23395004","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to linear element","termid":"FYPO:0006164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to linear element at meiotic recombination hotspot","synonyms":[{"name":"decreased linear element chromatin binding at meiotic DNA double-strand break hotspots","type":"exact"},{"name":"decreased protein localisation to linear element at meiotic recombination hotspot","type":"exact"},{"name":"reduced protein localization to linear element at meiotic recombination hotspot","type":"exact"}],"termid":"FYPO:0007657"}


id: MONDO:0010094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylocarpotarsal synostosis (SCT) syndrome is a skeletal dysplasia clinically characterized by postnatal progressive vertebral fusions frequently manifesting as block vertebrae, contributing to an undersized trunk and a disproportionate short stature, scoliosis, lordosis, carpal and tarsal synostosis, with club feet and a mild facial dysmorphism.","definition_xrefs":["Orphanet:3275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone development disease","termid":"MONDO:0005497"},{"relation_name":"is_a","term_name":"filamin-related bone disorder","termid":"MONDO:0019690"},{"relation_name":"is_a","term_name":"spondylodysplastic dysplasia","termid":"MONDO:0019694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondylocarpotarsal synostosis syndrome","secondary_identifiers":["ICD9:758.89","SCTID:702351004","DOID:0090116","GARD:4974","UMLS:C1848934","MEDGEN:341339","MESH:C535780","OMIM:272460"],"synonyms":[{"name":"SCT","type":"exact"},{"name":"Synspondylism","type":"exact"},{"name":"Synspondylism congenital","type":"related"},{"name":"Synspondylism, congenital","type":"related"},{"name":"congenital scoliosis with unilateral unsegmented bar","type":"exact"},{"name":"congenital synspondylism","type":"exact"},{"name":"scoliosis, congenital with unilateral unsegmented bar","type":"related"},{"name":"scoliosis, congenital, with unilateral unsegmented Bar","type":"related"},{"name":"spondylocarpotarsal syndrome","type":"exact"},{"name":"spondylocarpotarsal synostosis","type":"exact"},{"name":"spondylocarpotarsal synostosis syndrome","type":"exact"},{"name":"vertebral fusion with carpal coalition","type":"exact"}],"termid":"MONDO:0010094","xrefs":{"Monarch":{"xref_id":"0010094"}}}


id: MOD:01543
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a protein N-terminal with the Applied Biosystems iTRAQ8plex-115 reporter+balance group.","definition_xrefs":["Unimod:731#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-115 reporter+balance reagent acylated residue","termid":"MOD:01542"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated N-terminal","termid":"MOD:01712"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-115 reporter+balance reagent acylated N-terminal","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01543"}


id: GO:0003180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the aortic valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"aortic valve development","termid":"GO:0003176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aortic valve morphogenesis","termid":"GO:0003180"}


id: PBO:0043525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COA6 antisense RNA 1","termid":"PBO:0043525"}


id: PBO:0028114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-snoRNA_guided_rRNA_2'-O-methylation_abolished_at_specific_site","termid":"PBO:0028114"}


id: PBO:0088159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Voltage-gated high-affinity calcium channel; involved in calcium influx in response to some environmental stresses as well as exposure to mating pheromones; interacts and partially co-localizes with Mid1p; however, evidence suggests CCH1 is not required for Mid1p function","termid":"PBO:0088159"}


id: GO:1905917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell differentiation involved in phenotypic switching.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rph","GOC:TermGenie","PMID:25089138","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell differentiation involved in phenotypic switching","termid":"GO:1905915"},{"relation_name":"positively_regulates","term_name":"cell differentiation involved in phenotypic switching","termid":"GO:0090679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell differentiation involved in phenotypic switching","synonyms":[{"name":"activation of cell differentiation involved in phenotypic switching","type":"narrow"},{"name":"up regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"up-regulation of cell differentiation involved in phenotypic switching","type":"exact"},{"name":"upregulation of cell differentiation involved in phenotypic switching","type":"exact"}],"termid":"GO:1905917"}


id: PBO:0063892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class Q","termid":"PBO:0063892"}


id: SO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A peptide region which hydrogen bonded to another region of peptide running in the oposite direction (both running N-terminal to C-terminal). This orientation is slightly less stable because it introduces nonplanarity in the inter-strand hydrogen bonding pattern. Hydrogen bonding occurs between every other C=O from one strand to every other N-H on the adjacent strand. In this case, if two atoms C-alpha (i)and C-alpha (j) are adjacent in two hydrogen-bonded beta strands, then they do not hydrogen bond to each other; rather, one residue forms hydrogen bonds to the residues that flank the other (but not vice versa). For example, residue i may form hydrogen bonds to residues j - 1 and j + 1; this is known as a wide pair of hydrogen bonds. By contrast, residue j may hydrogen-bond to different residues altogether, or to none at all. The dihedral angles (phi, psi) are about (-120 degrees, 115 degrees) in parallel sheets.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta_strand","termid":"SO:0001111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"parallel_beta_strand","secondary_identifiers":["BS:00151"],"synonyms":[{"name":"parallel beta strand","type":"exact"}],"termid":"SO:0001113"}


id: PR:O60130
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16G5.16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein C16G5.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16G5.16","synonyms":[{"name":"Spom972h-SPBC16G5.16","type":"exact"}],"termid":"PR:O60130"}


id: PBO:0066893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 193","termid":"PBO:0066893"}


id: PBO:0051974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IZUMO1 receptor, JUNO","termid":"PBO:0051974"}


id: PBO:0056377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAPK8IP3 antisense RNA 1","termid":"PBO:0056377"}


id: FYPO:0000009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which adhesion of a cell to a substrate or another cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"},{"relation_name":"is_a","term_name":"abnormal cell adhesion","termid":"FYPO:0001872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal cell adhesion during vegetative growth","synonyms":[{"name":"abnormal cell adhesion during mitotic cell cycle","type":"related"},{"name":"adhesion defects during vegetative growth","type":"exact"}],"termid":"FYPO:0000009"}


id: PBO:0057697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1285-2","termid":"PBO:0057697"}


id: GO:2001268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of cysteine-type endopeptidase activity involved in apoptotic signaling pathway.","definition_xrefs":["GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cysteine-type endopeptidase activity involved in apoptotic signaling pathway (obsolete GO:2001268)","synonyms":[{"name":"negative regulation of cysteine-type endopeptidase activity involved in apoptotic signalling pathway","type":"exact"},{"name":"negative regulation of initiator caspase activity","type":"narrow"}],"termid":"GO:2001268"}


id: MONDO:0004085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A epithelioid cell melanoma that involves the optic choroid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant choroid melanoma","termid":"MONDO:0003878"},{"relation_name":"is_a","term_name":"epithelioid cell uveal melanoma","termid":"MONDO:0006200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"choroid epithelioid cell melanoma","secondary_identifiers":["MEDGEN:232360","UMLS:C1333024","DOID:7041","NCIT:C6102"],"synonyms":[{"name":"choroid epithelioid cell melanoma","type":"exact"},{"name":"choroidal epithelioid cell melanoma","type":"exact"},{"name":"epithelioid cell melanoma of choroid","type":"exact"},{"name":"epithelioid cell melanoma of optic choroid","type":"exact"},{"name":"epithelioid cell melanoma of the choroid","type":"exact"},{"name":"optic choroid epithelioid cell melanoma","type":"exact"}],"termid":"MONDO:0004085","xrefs":{"Monarch":{"xref_id":"0004085"}}}


id: MONDO:0032839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Noonan syndrome","termid":"MONDO:0018997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005046"],"is_obsolete":false,"name":"noonan syndrome 12","secondary_identifiers":["DOID:0112170","GARD:16369","OMIM:618624","MEDGEN:1684730","NCIT:C177120","UMLS:C5231432"],"synonyms":[{"name":"NOONAN SYNDROME 12","type":"related"},{"name":"NS12","type":"related"}],"termid":"MONDO:0032839","xrefs":{"Monarch":{"xref_id":"0032839"}}}


id: PR:Q9P804
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An N(2),N(2)-dimethylguanosine tRNA methyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03824","PANTHER:PTHR10631:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(26)-N(2))-dimethyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC25D12.05","secondary_identifiers":["UniProtKB:Q9P804"],"synonyms":[{"name":"Spom972h-TRMT1","type":"exact"},{"name":"tRNA 2,2-dimethylguanosine-26 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(guanine-26,N(2)-N(2)) methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m(2,2)G26)dimethyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P804"}


id: MONDO:0018924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare X-linked inherited form of syndromic microphthalmia characterized by unilateral or bilateral microphthalmia (and/or clinical anophthalmia) with or without coloboma in addition to a range of extraocular manifestations such as microcephaly, malformed ears, dental abnormalities (i.e. irregular shape of incisors), skeletal anomalies (duplicated thumbs, syndactyly, clinodactyly, camptodactyly), urogenital anomalies (hypospadias, cryptorchidism, renal dysgenesis, hydroureter) and mild to severe intellectual disability. It is allelic to two disorders: oculofaciocardiodental syndrome and premature aging appearance-developmental delay-cardiac arrhythmia syndrome.","definition_xrefs":["Orphanet:568"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic developmental defect of the eye (obsolete MONDO:0015217)","termid":"MONDO:0015217"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"excluded_subClassOf","term_name":"obsolete lens shape anomaly (obsolete MONDO:0020237)","termid":"MONDO:0020237"},{"relation_name":"excluded_subClassOf","term_name":"NAA10-related syndrome","termid":"MONDO:0100124"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, Lenz type","secondary_identifiers":["NORD:1359","GARD:87","icd11.foundation:678242327"],"synonyms":[{"name":"Lenz Microphthalmia Syndrome","type":"exact"},{"name":"Lenz dysplasia","type":"related"},{"name":"Lenz microphthalmia","type":"exact"},{"name":"Lenz microphthamia syndrome","type":"exact"},{"name":"MAA (formerly)","type":"related"},{"name":"MCOPS1","type":"related"},{"name":"microphthalmia Lenz type","type":"related"},{"name":"microphthalmia or anophthalmos with associated anomalies (formerly)","type":"related"},{"name":"microphthalmia syndromic 1","type":"related"},{"name":"syndromic microphthalmia type 1","type":"related"}],"termid":"MONDO:0018924","xrefs":{"Monarch":{"xref_id":"0018924"}}}


id: MONDO:0021654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mucinosis","termid":"MONDO:0002523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"diffuse cutaneous mucinosis","secondary_identifiers":["SCTID:238945000","UMLS:C0406655","MEDGEN:590581","ICD9:701.8"],"termid":"MONDO:0021654","xrefs":{"Monarch":{"xref_id":"0021654"}}}


id: MONDO:0023066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enchondromatosis dwarfism deafness","synonyms":[{"name":"Wallis cremin Beighton syndrome","type":"related"}],"termid":"MONDO:0023066","xrefs":{"Monarch":{"xref_id":"0023066"}}}


id: GO:1905400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of activated CD4-positive, alpha-beta T cell apoptotic process.","definition_xrefs":["GO_REF:0000058","PMID:24187568","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of T cell apoptotic process","termid":"GO:0070233"},{"relation_name":"is_a","term_name":"regulation of activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905399"},{"relation_name":"negatively_regulates","term_name":"activated CD4-positive, alpha-beta T cell apoptotic process","termid":"GO:1905398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptotic process","synonyms":[{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"down-regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"downregulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"inhibition of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T lymphocyte apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-cell apoptotic process","type":"exact"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptosis","type":"narrow"},{"name":"negative regulation of activated CD4-positive, alpha-beta T-lymphocyte apoptotic process","type":"exact"}],"termid":"GO:1905400"}


id: FYPO:0002432
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of germinated spores and vegetative cells of abnormal shape. The vegetative cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including germinated spores and cells with abnormal shape (obsolete FYPO:0002432)","termid":"FYPO:0002432"}


id: PBO:0041782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine","termid":"PBO:0041782"}


id: CHEBI:50292
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadmium sulfate","termid":"CHEBI:50292"}


id: GO:0030142
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A vesicle that mediates transport from the Golgi to the endoplasmic reticulum.","definition_xrefs":["GOC:mah","PMID:22160157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport vesicle","termid":"GO:0030133"},{"relation_name":"is_a","term_name":"COPI-coated vesicle","termid":"GO:0030137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"COPI-coated Golgi to ER transport vesicle","synonyms":[{"name":"Golgi to ER constitutive secretory pathway transport vesicle","type":"exact"},{"name":"Golgi to endoplasmic reticulum transport vesicle","type":"exact"},{"name":"Golgi-ER transport vesicle","type":"exact"},{"name":"Golgi-endoplasmic reticulum transport vesicle","type":"exact"},{"name":"retrograde transport vesicle","type":"exact"}],"termid":"GO:0030142"}


id: PBO:0091651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenine deaminase","termid":"PBO:0091651"}


id: PBO:0062265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily F member 2 pseudogene","termid":"PBO:0062265"}


id: PBO:0056603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDM4 pseudogene 1","termid":"PBO:0056603"}


id: MONDO:0016780
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor developmental delay due to 14q32.2 paternally expressed gene defect","termid":"MONDO:0014541"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 14","termid":"MONDO:0016912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal 14q32.2 microdeletion syndrome","secondary_identifiers":["GARD:17220","UMLS:C5679639","Orphanet:254525","MEDGEN:1842589"],"synonyms":[{"name":"paternal del(14)(q32.2)","type":"exact"},{"name":"paternal monosomy 14q32.2","type":"exact"}],"termid":"MONDO:0016780","xrefs":{"Monarch":{"xref_id":"0016780"}}}


id: GO:0016661
data:
  {"annotated_genes":["SJAG_04299"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004846"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a hydrogen or electron acceptor.","definition_xrefs":["EC:1.7.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04299":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, other acceptors","type":"narrow"}],"termid":"GO:0016661","terms_by_termid":{"GO:0004846":null}}


id: PBO:0026850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_chromatin_at_rRNA_gene","termid":"PBO:0026850"}


id: MONDO:0007155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arteritis, familial granulomatous, with juvenile polyarthritis","secondary_identifiers":["UMLS:C1862510","MEDGEN:349529","MESH:C566253","OMIM:108050"],"synonyms":[{"name":"arteritis, familial granulomatous, with juvenile polyarthritis","type":"exact"}],"termid":"MONDO:0007155","xrefs":{"Monarch":{"xref_id":"0007155"}}}


id: PBO:0057585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 890","termid":"PBO:0057585"}


id: GO:1901606
data:
  {"annotated_genes":["SJAG_03641","SJAG_03398","SJAG_00944","SJAG_01903","SJAG_02235","SJAG_03434","SJAG_03671","SJAG_04827","SJAG_00714","SJAG_00937","SJAG_04145","SJAG_00495","SJAG_02901","SJAG_02496","SJAG_02450","SJAG_03861"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[80892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[98424,79995,76128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[70426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[80344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[80342,115260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[72833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[115994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[93721,81563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[80068,72211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[74075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[75041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of an alpha-amino acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process","termid":"GO:0009063"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_00714":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_01903":null,"SJAG_02235":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02901":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_04145":null,"SJAG_04827":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"alpha-amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"alpha-amino acid breakdown","type":"exact"},{"name":"alpha-amino acid catabolism","type":"exact"},{"name":"alpha-amino acid degradation","type":"exact"}],"termid":"GO:1901606","terms_by_termid":{"GO:0006533":null,"GO:0006538":null,"GO:0006567":null,"GO:0006574":null,"GO:0010121":null,"GO:0010133":null,"GO:0019450":null,"GO:0019464":null,"GO:0019478":null,"GO:0019544":null,"GO:0036088":null,"GO:0042853":null}}


id: MONDO:0030010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 25 with anosmia","secondary_identifiers":["GARD:16387","OMIM:618841","MEDGEN:1717461","UMLS:C5394246"],"synonyms":[{"name":"HH25","type":"exact"},{"name":"HYPOGONADOTROPIC HYPOGONADISM 25 WITH ANOSMIA","type":"exact"},{"name":"hypogonadotropic hypogonadism 25 with anosmia","type":"exact"}],"termid":"MONDO:0030010","xrefs":{"Monarch":{"xref_id":"0030010"}}}


id: PBO:0069219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 474, pseudogene","termid":"PBO:0069219"}


id: MONDO:0013009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Megarbane-Jalkh syndrome","secondary_identifiers":["UMLS:C2748555","OMIM:612785","MEDGEN:412581","MESH:C548071"],"synonyms":[{"name":"Megarbane Jalkh syndrome","type":"related"},{"name":"Megarbane-Jalkh syndrome","type":"exact"},{"name":"developmental delay dysmorphic features neonatal spontaneous fractures wrinkled skin and hepatic failure","type":"related"},{"name":"developmental delay, dysmorphic features, neonatal spontaneous fractures, wrinkled skin, and hepatic failure","type":"related"}],"termid":"MONDO:0013009","xrefs":{"Monarch":{"xref_id":"0013009"}}}


id: MONDO:0000526
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A carcinoid tumor (disease) that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete appendix carcinoid tumor (obsolete MONDO:0000526)","termid":"MONDO:0000526","xrefs":{"Monarch":{"xref_id":"0000526"}}}


id: PBO:0027243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_polyadenylated_5S_rRNA_level","termid":"PBO:0027243"}


id: PBO:0070639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 10","termid":"PBO:0070639"}


id: GO:0036075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ossification that requires the replacement of a preexisting tissue prior to bone tissue formation.","definition_xrefs":["GO_REF:0000034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ossification","termid":"GO:0001503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"replacement ossification","synonyms":[{"name":"indirect ossification","type":"exact"}],"termid":"GO:0036075"}


id: PBO:0000674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner centromere protein, CENP-I ortholog Mis6","termid":"PBO:0000674"}


id: PATO:0002062
data:
  {"annotation_feature_type":"gene","cv_name":"quality","direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physical quality of a process","termid":"PATO:0002062"}


id: GO:1903148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any uracil transmembrane transporter activity that is involved in uracil import into cell.","definition_xrefs":["GOC:dos","GO_REF:0000061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete uracil transmembrane transporter activity involved in uracil import into cell (obsolete GO:1903148)","synonyms":[{"name":"uracil transmembrane transporter activity involved in uracil import into cell","type":"exact"},{"name":"uracil/uridine permease activity involved in uracil import into cell","type":"related"}],"termid":"GO:1903148"}


id: PBO:0054796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2210","termid":"PBO:0054796"}


id: MONDO:0007077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tietz syndrome is a genetic hypopigmentation and deafness syndrome characterized by congenital profound bilateral sensorineural hearing loss and generalized albino-like hypopigmentation of skin, eyes and hair.","definition_xrefs":["Orphanet:42665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"hypopigmentation of the skin","termid":"MONDO:0019290"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"Tietz syndrome","secondary_identifiers":["GARD:7772","OMIM:103500","UMLS:C0391816","MESH:C536919","ICD9:270.2","DOID:0090002","SCTID:403805009","MEDGEN:98213"],"synonyms":[{"name":"TADS","type":"related"},{"name":"Tietz albinism-deafness syndrome","type":"exact"},{"name":"Tietz syndrome","type":"exact"},{"name":"albinism-deafness of Tietz","type":"exact"},{"name":"hypopigmentation-deafness syndrome","type":"exact"},{"name":"hypopigmentation/deafness of Tietz","type":"exact"}],"termid":"MONDO:0007077","xrefs":{"Monarch":{"xref_id":"0007077"}}}


id: PBO:0053490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 467","termid":"PBO:0053490"}


id: GO:0002061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a pyrimidine nucleobase, an organic nitrogenous base with a pyrimidine skeleton.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase binding","termid":"GO:0002054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyrimidine nucleobase binding","synonyms":[{"name":"1,3-diazine binding","type":"narrow"},{"name":"pyrimidine base binding","type":"exact"},{"name":"pyrimidine binding","type":"related"}],"termid":"GO:0002061"}


id: GO:0046252
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of toluene, a volatile monoaromatic hydrocarbon found in crude petroleum and petroleum products.","definition_xrefs":["PMID:6508079","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toluene metabolic process","termid":"GO:0018970"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"toluene biosynthetic process","synonyms":[{"name":"toluene anabolism","type":"exact"},{"name":"toluene biosynthesis","type":"exact"},{"name":"toluene formation","type":"exact"},{"name":"toluene synthesis","type":"exact"}],"termid":"GO:0046252"}


id: PBO:0064544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 6, pseudogene","termid":"PBO:0064544"}


id: PBO:0081885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 835","termid":"PBO:0081885"}


id: PBO:0046948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 74 member A1","termid":"PBO:0046948"}


id: PBO:0120785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lin-28 RNA binding posttranscriptional regulator A","termid":"PBO:0120785"}


id: MONDO:0041755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"twin to twin transfusion syndrome","termid":"MONDO:0019805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"twin reversal arterial perfusion syndrome","secondary_identifiers":["MEDGEN:736778","SCTID:417006004","UMLS:C1562817"],"synonyms":[{"name":"twin reversal arterial perfusion syndrome","type":"exact"}],"termid":"MONDO:0041755","xrefs":{"Monarch":{"xref_id":"0041755"}}}


id: GO:0031647
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that affects the structure and integrity of a protein, altering the likelihood of its degradation or aggregation.","definition_xrefs":["GOC:dph","GOC:mah","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein stability","termid":"GO:0031647"}


id: MONDO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of periapical periodontitis.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periapical periodontitis","termid":"MONDO:0004508"},{"relation_name":"is_a","term_name":"chronic periodontitis","termid":"MONDO:0005593"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic apical periodontitis","secondary_identifiers":["icd11.foundation:1079140240","DOID:11269","ICD10CM:K04.5","MEDGEN:581135","SCTID:718052004","UMLS:C0392492","ICD9:522.6"],"synonyms":[{"name":"chronic periapical periodontitis","type":"exact"},{"name":"periapical periodontitis, chronic","type":"exact"}],"termid":"MONDO:0001251","xrefs":{"Monarch":{"xref_id":"0001251"}}}


id: GO:0061574
data:
  {"annotated_genes":["SJAG_05926","SJAG_00888"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77697,116415],"is_not":false,"summary":null,"term":"GO:0061574"}]},"cv_name":"cellular_component","definition":"A protein complex involved in regulation of mRNA processing and apoptosis. It binds to RNA in a sequence-independent manner and is recruited to the EJC prior to or during the splicing process. In humans the core proteins are RNPS1, SAP18 and ACIN1.","definition_xrefs":["PMID:16314458","GOC:dph","PMID:22388736","PMID:12665594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_05926":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ASAP complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0061574","terms_by_termid":{"GO:0061574":null}}


id: PBO:0061040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIPA2 pseudogene 1","termid":"PBO:0061040"}


id: PBO:0045588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 3","termid":"PBO:0045588"}


id: PBO:0061964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily AD member 1 pseudogene","termid":"PBO:0061964"}


id: FYPO:0008126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally found only in the cytoplasm  is observed in the nucleoplasm during mitotic M-phase.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein mislocalized to nucleus","termid":"FYPO:0003453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"cytoplasmic protein mislocalized to nucleoplasm during mitotic M-phase","termid":"FYPO:0008126"}


id: GO:0018747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: phenanthrene-1,2-oxide + H2O = trans-1,2-dihydrodiolphenanthrene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene-1,2-epoxide hydrolase activity (obsolete GO:0018747)","termid":"GO:0018747"}


id: GO:0075247
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a dikaryotic spore of typically a rust fungus is produced in an aecium; in heteroecious rusts, the aeciospore is a spore stage that infects the alternate host.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aeciospore formation","termid":"GO:0075247"}


id: PBO:0079779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A complex locus","termid":"PBO:0079779"}


id: MONDO:0014730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 16, primary, autosomal recessive","secondary_identifiers":["MEDGEN:898705","GARD:16151","OMIM:616681","UMLS:C4225249","DOID:0070289"],"synonyms":[{"name":"MCPH16","type":"exact"},{"name":"microcephaly 16, primary, autosomal recessive","type":"exact"},{"name":"microcephaly 16, primary, autosomal recessive; MCPH16","type":"exact"}],"termid":"MONDO:0014730","xrefs":{"Monarch":{"xref_id":"0014730"}}}


id: MONDO:0013331
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any combined deficiency of factor V and factor VIII in which the cause of the disease is a mutation in the MCFD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined deficiency of factor V and factor VIII","termid":"MONDO:0018175"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor 5 and Factor VIII, combined deficiency of, 2","secondary_identifiers":["UMLS:C3150889","GARD:18632","OMIM:613625","MEDGEN:462239"],"synonyms":[{"name":"F5F8D2","type":"related"},{"name":"MCFD2 combined deficiency of factor V and factor VIII","type":"exact"},{"name":"combined deficiency of factor V and factor VIII caused by mutation in MCFD2","type":"exact"},{"name":"factor 5 and Factor VIII, combined deficiency of, 2","type":"exact"},{"name":"factor 5 and Factor VIII, combined deficiency of, type 2","type":"exact"},{"name":"factor V and factor VIII, combined deficiency of","type":"exact"},{"name":"factor V and factor VIII, combined deficiency of, 2","type":"related"}],"termid":"MONDO:0013331","xrefs":{"Monarch":{"xref_id":"0013331"}}}


id: PBO:0018086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-C ortholog Cnp3","termid":"PBO:0018086"}


id: GO:1902445
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any regulation of mitochondrial membrane permeability that is involved in programmed necrotic cell death.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","PMID:22493254","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability","termid":"GO:0046902"},{"relation_name":"part_of","term_name":"programmed necrotic cell death","termid":"GO:0097300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0007005","GO:0006810","GO:0061024","GO:0008150"],"is_obsolete":false,"name":"regulation of mitochondrial membrane permeability involved in programmed necrotic cell death","synonyms":[{"name":"regulation of transport across mitochondrial membrane involved in programmed necrotic cell death","type":"exact"}],"termid":"GO:1902445"}


id: MONDO:0005118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tick-borne, infectious disease caused by Anaplasma phagocytophilum, an obligate intracellular bacterium that is typically transmitted to humans by ticks of the Ixodes ricinus species complex.","definition_xrefs":["Wikipedia:Human_granulocytic_anaplasmosis"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"ehrlichiosis","termid":"MONDO:0016003"},{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"anaplasmosis","termid":"MONDO:0025303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"human granulocytic ehrlichiosis","secondary_identifiers":["SCTID:85708001","UMLS:C0483368","DOID:0050025","GARD:71","ICD9:082.49","EFO:0000777","MEDGEN:96911"],"synonyms":[{"name":"HGE","type":"broad"},{"name":"human anaplasmosis caused by Anaplasma phagocytophilum","type":"related"},{"name":"human anaplasmosis due to Anaplasma phagocytophilum","type":"exact"},{"name":"human ehrlichial infection, human granulocytic type","type":"related"},{"name":"human granulocytic anaplasmosis","type":"exact"},{"name":"human granulocytic ehrlichiosis","type":"exact"},{"name":"infection by Anaplasma phagocytophilum","type":"related"}],"termid":"MONDO:0005118","xrefs":{"Monarch":{"xref_id":"0005118"}}}


id: PBO:0012001
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible horizonal transfer","termid":"PBO:0012001"}


id: GO:0035787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a cell from one site to another that will contribute to the progression of the kidney over time, from its formation to the mature organ.","definition_xrefs":["GOC:bf","GOC:mtg_kidney_jan10","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration involved in kidney development","termid":"GO:0035787"}


id: MONDO:0010082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subaortic stenosis-short stature syndrome","secondary_identifiers":["GARD:405","MESH:C537749","UMLS:C0795947","OMIM:271960","MEDGEN:167085","Orphanet:3191"],"synonyms":[{"name":"Onat syndrome","type":"exact"},{"name":"subaortic stenosis short stature syndrome","type":"related"},{"name":"subaortic stenosis--short stature syndrome","type":"related"}],"termid":"MONDO:0010082","xrefs":{"Monarch":{"xref_id":"0010082"}}}


id: PBO:0068739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5B small nuclear 2, pseudogene","termid":"PBO:0068739"}


id: PBO:0082631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of cytosolic iron-sulfur protein assembly (CIA) machinery; acts at a late step of Fe-S cluster assembly; forms the CIA targeting complex with Cia1p and Met18p that directs Fe-S cluster incorporation and maturation of a subset of proteins involved in methionine biosynthesis, DNA replication and repair, transcription, and telomere maintenance; ortholog of human FAM96B","termid":"PBO:0082631"}


id: PR:Q10482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A lysosomal amino acid transporter 1 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seven transmembrane protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17C9.10","secondary_identifiers":["UniProtKB:Q10482"],"synonyms":[{"name":"Spom972h-PQLC2","type":"exact"}],"termid":"PR:Q10482"}


id: GO:0040002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of a collagen and cuticulin-based noncellular, hardened, or membranous secretion from an epithelial sheet. An example of this process is found in Caenorhabditis elegans.","definition_xrefs":["GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collagen and cuticulin-based cuticle development","synonyms":[{"name":"collagen and cuticulin-based cuticle anabolism","type":"exact"},{"name":"collagen and cuticulin-based cuticle biosynthetic process","type":"exact"},{"name":"collagen and cuticulin-based cuticle formation","type":"exact"},{"name":"collagen and cuticulin-based cuticle synthesis","type":"exact"}],"termid":"GO:0040002"}


id: PR:Q10147
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00254","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1D4.04","secondary_identifiers":["UniProtKB:Q10147"],"synonyms":[{"name":"CCT-beta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT2","type":"exact"},{"name":"TCP-1-beta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10147"}


id: GO:0047136
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(dimethylamino)azobenzene + H2O + NADP+ = 4-(dimethylamino)phenylazoxybenzene + H+ + NADPH.","definition_xrefs":["EC:1.7.1.11","RHEA:19789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4-(dimethylamino)phenylazoxybenzene reductase activity","secondary_identifiers":["KEGG_REACTION:R04303","MetaCyc:1.6.6.12-RXN"],"synonyms":[{"name":"4-(dimethylamino)phenylazobenzene:NADP+ oxidoreductase activity","type":"related"},{"name":"N,N-dimethyl-p-aminoazobenzene oxide reductase activity","type":"related"},{"name":"NADPH-dependent DMAB N-oxide reductase activity","type":"related"},{"name":"NADPH2:4-(dimethylamino)phenylazoxybenzene oxidoreductase activity","type":"related"},{"name":"NADPH:4-(dimethylamino)phenylazoxybenzene oxidoreductase activity","type":"related"},{"name":"dimethylaminoazobenzene N-oxide reductase activity","type":"related"}],"termid":"GO:0047136"}


id: PBO:0049461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycogenin 2 pseudogene 1","termid":"PBO:0049461"}


id: PATO:0002108
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling small nipple like projection.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exserted","termid":"PATO:0000623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary","termid":"PATO:0002108"}


id: PBO:0042022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 80","termid":"PBO:0042022"}


id: PBO:0041748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 intronic transcript 1","termid":"PBO:0041748"}


id: MONDO:0020217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete secondary dysgenetic glaucoma associated with neural crest cell migration anomaly (obsolete MONDO:0020217)","secondary_identifiers":["Orphanet:98632"],"synonyms":[{"name":"glaucoma associated with neural crest cell migration anomaly","type":"related"}],"termid":"MONDO:0020217","xrefs":{"Monarch":{"xref_id":"0020217"}}}


id: PBO:0058166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4460","termid":"PBO:0058166"}


id: FYPO:0005420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more iron assimilation RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Iron assimilation RNAs are transcribed from genes whose products are involved in any process in which iron is solubilized and transported into a cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"increased level of iron assimilation gene mRNA during vegetative growth","synonyms":[{"name":"increased iron assimilation gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of iron assimilation gene RNA during vegetative growth","type":"exact"},{"name":"increased level of iron assimilation gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of iron assimilation gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0005420"}


id: GO:0031775
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lutropin-choriogonadotropic hormone receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor binding","termid":"GO:0001664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lutropin-choriogonadotropic hormone receptor binding","synonyms":[{"name":"lutropin-choriogonadotropic hormone receptor ligand","type":"narrow"}],"termid":"GO:0031775"}


id: GO:0000825
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5-tetrakisphosphate + ATP = 1D-myo-inositol 1,3,4,5,6-pentakisphosphate + ADP + H+.","definition_xrefs":["MetaCyc:RXN-7184"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate kinase activity","termid":"GO:0051765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"inositol-1,3,4,5-tetrakisphosphate 6-kinase activity","secondary_identifiers":["KEGG_REACTION:R10953","Reactome:R-HSA-1855206"],"synonyms":[{"name":"1D-myo-inositol-tetrakisphosphate 6-kinase activity","type":"broad"},{"name":"inositol 1,3,4,5-tetrakisphosphate 6-kinase activity","type":"exact"},{"name":"inositol tetrakisphosphate 6-kinase activity","type":"broad"}],"termid":"GO:0000825"}


id: GO:0080159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the zygote irreversibly increases in size in one dimension after fertilization. An example of such a process is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unidimensional cell growth","termid":"GO:0009826"},{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"zygote elongation","termid":"GO:0080159"}


id: PBO:0113161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hsp90 chaperone; functionally redundant with Hsc82p; required for pheromone signaling; negative regulator of the Hsf1p-dependent heat shock response with Cpr7p; docks with Tom70p for mitochondrial preprotein delivery; promotes telomerase DNA binding, nucleotide addition; promotes solubility of chaperone-substrate complexes; DNA damage induced nuclear import is Aha1p dependent; protein abundance increases in response to DNA replication stress; human homolog, HSP90AB1, complements null mutant","termid":"PBO:0113161"}


id: PBO:0065540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and tensin homolog pseudogene 1","termid":"PBO:0065540"}


id: GO:0071256
data:
  {"annotated_genes":["SJAG_02330","SJAG_00959","SJAG_00064","SJAG_02208"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100057,111383,108196,65153],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005784"},{"annotations":[100058,110349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071261"}]},"cv_name":"cellular_component","definition":"A protein complex that constitutes a specific site of protein translocation across the endoplasmic reticulum, which involves the signal recognition particle receptor. The complex contains a core heterotrimer of alpha, beta and gamma subunits, and may contain additional proteins.","definition_xrefs":["PMID:8612571","PMID:18166647","PMID:10611978","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"rough endoplasmic reticulum membrane","termid":"GO:0030867"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00064":null,"SJAG_00959":null,"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005783","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"translocon complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0031206"],"synonyms":[{"name":"Sec complex-associated translocon complex","type":"narrow"}],"termid":"GO:0071256","terms_by_termid":{"GO:0005784":null,"GO:0071261":null}}


id: PBO:0005633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase II subunit 3","termid":"PBO:0005633"}


id: PBO:0081206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN7 ZNF cluster antisense RNA 1","termid":"PBO:0081206"}


id: PBO:0044368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic FMR1 interacting protein 1","termid":"PBO:0044368"}


id: PBO:0066487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RFPL3 antisense","termid":"PBO:0066487"}


id: MONDO:0010176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Joubert syndrome with orofaciodigital defect (or oral-facial-digital syndrome type 6, OFD6) is a very rare subtype of Joubert syndrome and related disorders (JSRD) characterized by the neurological features of JS associated with orofacial anomalies and often polydactyly.","definition_xrefs":["Orphanet:2754"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"Joubert syndrome 17","termid":"MONDO:0013824"},{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome type 6","secondary_identifiers":["UMLS:C2745997","MESH:C536531","OMIM:277170","NCIT:C124841","MEDGEN:411200","DOID:0060376","SCTID:721873007","GARD:4412"],"synonyms":[{"name":"Joubert syndrome with oral-facial-digital syndrome","type":"exact"},{"name":"Joubert syndrome with orofaciodigital defect","type":"exact"},{"name":"OFD6","type":"exact"},{"name":"Ofds 6","type":"related"},{"name":"Varadi syndrome","type":"exact"},{"name":"Varadi-Papp syndrome","type":"exact"},{"name":"Váradi syndrome","type":"related"},{"name":"Váradi-Papp syndrome","type":"related"},{"name":"oral-Facial-digital syndrome, type 6","type":"related"},{"name":"oral-facial-digital syndrome type 6","type":"exact"},{"name":"orofaciodigital syndrome 6","type":"related"},{"name":"orofaciodigital syndrome VI","type":"exact"},{"name":"orofaciodigital syndrome type 6","type":"exact"},{"name":"polydactyly - cleft lip/palate - psychomotor retardation","type":"related"},{"name":"polydactyly cleft lip palate psychomotor retardation","type":"related"},{"name":"polydactyly, cleft Lip/palate or lingual lump, and psychomotor retardation","type":"related"},{"name":"polydactyly-cleft lip/palate-psychomotor retardation syndrome","type":"exact"}],"termid":"MONDO:0010176","xrefs":{"Monarch":{"xref_id":"0010176"}}}


id: PBO:0120355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRYGN antisense RNA 1","termid":"PBO:0120355"}


id: GO:1905629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serotonin biosynthetic process.","definition_xrefs":["PMID:25642596","GOC:TermGenie","GOC:pad","GOC:PARL","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of serotonin biosynthetic process","termid":"GO:1905627"},{"relation_name":"positively_regulates","term_name":"serotonin biosynthetic process","termid":"GO:0042427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serotonin biosynthetic process","synonyms":[{"name":"activation of serotonin anabolism","type":"narrow"},{"name":"activation of serotonin biosynthesis","type":"narrow"},{"name":"activation of serotonin biosynthetic process","type":"narrow"},{"name":"activation of serotonin formation","type":"narrow"},{"name":"activation of serotonin synthesis","type":"narrow"},{"name":"positive regulation of serotonin anabolism","type":"exact"},{"name":"positive regulation of serotonin biosynthesis","type":"exact"},{"name":"positive regulation of serotonin formation","type":"exact"},{"name":"positive regulation of serotonin synthesis","type":"exact"},{"name":"up regulation of serotonin anabolism","type":"exact"},{"name":"up regulation of serotonin biosynthesis","type":"exact"},{"name":"up regulation of serotonin biosynthetic process","type":"exact"},{"name":"up regulation of serotonin formation","type":"exact"},{"name":"up regulation of serotonin synthesis","type":"exact"},{"name":"up-regulation of serotonin anabolism","type":"exact"},{"name":"up-regulation of serotonin biosynthesis","type":"exact"},{"name":"up-regulation of serotonin biosynthetic process","type":"exact"},{"name":"up-regulation of serotonin formation","type":"exact"},{"name":"up-regulation of serotonin synthesis","type":"exact"},{"name":"upregulation of serotonin anabolism","type":"exact"},{"name":"upregulation of serotonin biosynthesis","type":"exact"},{"name":"upregulation of serotonin biosynthetic process","type":"exact"},{"name":"upregulation of serotonin formation","type":"exact"},{"name":"upregulation of serotonin synthesis","type":"exact"}],"termid":"GO:1905629"}


id: GO:1902966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to early endosome.","definition_xrefs":["GOC:sjp","GO_REF:0000058","GOC:TermGenie","PMID:22621900"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to early endosome","termid":"GO:1902965"},{"relation_name":"is_a","term_name":"positive regulation of protein localization to endosome","termid":"GO:1905668"},{"relation_name":"positively_regulates","term_name":"protein localization to early endosome","termid":"GO:1902946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to early endosome","synonyms":[{"name":"activation of protein localisation in early endosome","type":"narrow"},{"name":"activation of protein localisation to early endosome","type":"narrow"},{"name":"activation of protein localization in early endosome","type":"narrow"},{"name":"activation of protein localization to early endosome","type":"narrow"},{"name":"positive regulation of protein localisation in early endosome","type":"exact"},{"name":"positive regulation of protein localisation to early endosome","type":"exact"},{"name":"positive regulation of protein localization in early endosome","type":"exact"},{"name":"up regulation of protein localisation in early endosome","type":"exact"},{"name":"up regulation of protein localisation to early endosome","type":"exact"},{"name":"up regulation of protein localization in early endosome","type":"exact"},{"name":"up regulation of protein localization to early endosome","type":"exact"},{"name":"up-regulation of protein localisation in early endosome","type":"exact"},{"name":"up-regulation of protein localisation to early endosome","type":"exact"},{"name":"up-regulation of protein localization in early endosome","type":"exact"},{"name":"up-regulation of protein localization to early endosome","type":"exact"},{"name":"upregulation of protein localisation in early endosome","type":"exact"},{"name":"upregulation of protein localisation to early endosome","type":"exact"},{"name":"upregulation of protein localization in early endosome","type":"exact"},{"name":"upregulation of protein localization to early endosome","type":"exact"}],"termid":"GO:1902966"}


id: MONDO:1010764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in chicken.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, chicken","secondary_identifiers":["OMIA:001055-9031"],"termid":"MONDO:1010764","xrefs":{"Monarch":{"xref_id":"1010764"}}}


id: GO:1905777
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of exonuclease activity.","definition_xrefs":["GOC:BHF_telomere","GO_REF:0000059","GOC:nc","PMID:15200954","GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of exonuclease activity (obsolete GO:1905777)","synonyms":[{"name":"regulation of exonuclease IX activity","type":"narrow"}],"termid":"GO:1905777"}


id: MONDO:1012150
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant hyperthermia, non-human animal","termid":"MONDO:1011713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hyperthermia, cattle","secondary_identifiers":["OMIA:000621-9913"],"termid":"MONDO:1012150","xrefs":{"Monarch":{"xref_id":"1012150"}}}


id: CHEBI:35176
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc sulfate","termid":"CHEBI:35176"}


id: PBO:0047967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(X)(q28) E","termid":"PBO:0047967"}


id: PBO:0046156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELAV like RNA binding protein 4","termid":"PBO:0046156"}


id: GO:0102977
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nitrilotriacetate + O2 + FMNH2 = ammoniodiacetate + 2-oxo monocarboxylic acid anion + H2O + FMN.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete nitrilotriacetate monooxygenase activity (FMN-dependent) (obsolete GO:0102977)","termid":"GO:0102977"}


id: GO:0050329
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tetrahydroxypteridine = H+ + xanthine-8-carboxylate.","definition_xrefs":["RHEA:18097","EC:5.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular lyase activity","termid":"GO:0016872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tetrahydroxypteridine cycloisomerase activity","secondary_identifiers":["MetaCyc:TETRAHYDROXYPTERIDINE-CYCLOISOMERASE-RXN","KEGG_REACTION:R04154"],"synonyms":[{"name":"tetrahydroxypteridine lyase (isomerizing)","type":"related"}],"termid":"GO:0050329"}


id: GO:0010775
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which double strand breaks are formed and repaired through a double Holliday junction intermediate resulting in meiotic recombination.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic strand invasion","termid":"GO:0000708"},{"relation_name":"part_of","term_name":"meiotic gene conversion","termid":"GO:0006311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"meiotic strand invasion involved in meiotic gene conversion","termid":"GO:0010775"}


id: PBO:0029866
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores,_undivided_germinated_spores_and_divided_germinated_spores_(obsolete_FYPO:0002371)","termid":"PBO:0029866"}


id: MONDO:0018005
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spastic paraplegia-Paget disease of bone syndrome is an extremely rare, complex form of hereditary spastic paraplegia characterized by a slowly progressive spastic paraplegia (with increased muscle tone, decreased strength in the anterior tibial muscles and hyperreflexia in the lower extremities with Babinski sign) presenting in adulthood, associated with Paget disease of the bone. Cognitive decline, dementia and myopathic changes at muscle biopsy have not been reported.","definition_xrefs":["Orphanet:329475"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559"],"is_obsolete":false,"name":"spastic paraplegia-Paget disease of bone syndrome","secondary_identifiers":["GARD:21491","UMLS:C4511969","MEDGEN:1388986"],"termid":"MONDO:0018005","xrefs":{"Monarch":{"xref_id":"0018005"}}}


id: PBO:0082698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the mannan polymerase I; complex contains Van1p and Mnn9p and is involved in the first steps of mannan synthesis; mutants are vanadate-resistant","termid":"PBO:0082698"}


id: PBO:0030411
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_maltase_activity","termid":"PBO:0030411"}


id: PBO:0012556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WIn Suppressing","termid":"PBO:0012556"}


id: GO:0005589
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen heterotrimer containing type VI alpha chains in alpha1(VI)alpha2(VI)alpha3(VI) trimers; type VI collagen triple helices associate to form beaded fibrils.","definition_xrefs":["PMID:21421911","ISBN:0721639976","PMID:19693541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"von-Willerbrand-factor-A-domain-rich collagen trimer","termid":"GO:0140158"},{"relation_name":"part_of","term_name":"collagen beaded filament","termid":"GO:0098647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type VI trimer","termid":"GO:0005589"}


id: GO:0052213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An interaction with a symbiont organism mediated by a substance secreted by a host organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete interaction with symbiont via secreted substance (obsolete GO:0052213)","synonyms":[{"name":"interaction with symbiont via secreted substance during symbiotic interaction","type":"related"},{"name":"interaction with symbiont via secreted substance involved in symbiotic interaction","type":"related"}],"termid":"GO:0052213"}


id: PATO:0000751
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000751 locomotor activity value (obsolete PATO:0000751)","termid":"PATO:0000751"}


id: SO:0000936
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in partially rearranged genomic DNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_segment","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor rearranged segment","type":"exact"}],"termid":"SO:0000936"}


id: GO:0035450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of a plastid thylakoid membrane consisting of gene products and protein complexes that are loosely bound to its lumenal surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:bf","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of plastid thylakoid membrane","termid":"GO:0035449"},{"relation_name":"is_a","term_name":"extrinsic component of plastid inner membrane","termid":"GO:0035453"},{"relation_name":"part_of","term_name":"stromal side of plastid inner membrane","termid":"GO:0098570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of lumenal side of plastid thylakoid membrane","synonyms":[{"name":"extrinsic to lumenal leaflet of plastid thylakoid membrane","type":"exact"},{"name":"extrinsic to lumenal side of plastid thylakoid membrane","type":"narrow"},{"name":"peripheral to lumenal side of plastid thylakoid membrane","type":"exact"}],"termid":"GO:0035450"}


id: GO:0090737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that contributes to the maintenance of proper telomeric length and structure via the activation of telomere shortening pathways that compensate telomerase-dependent excessive telomere elongation. Telomere attrition is mediated by a mechanism which involves the generation of single-stranded C-rich telomeric DNA, and the formation and removal of double-stranded telomeric circular DNA (T-circles). Telomere trimming is an independent pathway to recombination-mediated telomere elongation and the well-documented gradual telomere attrition that accompanies cellular replication.","definition_xrefs":["PMID:27918544","GOC:BHF","GOC:BHF_telomere","GOC:nc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere maintenance","termid":"GO:0000723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032200"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0032200","GO:0006259"],"is_obsolete":false,"name":"telomere maintenance via telomere trimming","termid":"GO:0090737"}


id: GO:1903769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cell proliferation in bone marrow.","definition_xrefs":["GOC:TermGenie","PMID:9241534","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell population proliferation","termid":"GO:0008285"},{"relation_name":"is_a","term_name":"regulation of cell proliferation in bone marrow","termid":"GO:0071863"},{"relation_name":"negatively_regulates","term_name":"cell proliferation in bone marrow","termid":"GO:0071838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell proliferation in bone marrow","synonyms":[{"name":"down regulation of bone marrow cell proliferation","type":"exact"},{"name":"down regulation of cell proliferation in bone marrow","type":"exact"},{"name":"down-regulation of bone marrow cell proliferation","type":"exact"},{"name":"down-regulation of cell proliferation in bone marrow","type":"exact"},{"name":"downregulation of bone marrow cell proliferation","type":"exact"},{"name":"downregulation of cell proliferation in bone marrow","type":"exact"},{"name":"inhibition of bone marrow cell proliferation","type":"narrow"},{"name":"inhibition of cell proliferation in bone marrow","type":"narrow"},{"name":"negative regulation of bone marrow cell proliferation","type":"exact"}],"termid":"GO:1903769"}


id: GO:0033971
data:
  {"annotated_genes":["SJAG_04300"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64693],"is_not":false,"summary":null,"term":"GO:0033971"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxyisourate + H2O = 5-hydroxy-2-oxo-4-ureido-2,5-dihydro-1H-imidazole-5-carboxylate + H+.","definition_xrefs":["EC:3.5.2.17","RHEA:23736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04300":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016810","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"hydroxyisourate hydrolase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["KEGG_REACTION:R06601","MetaCyc:3.5.2.17-RXN"],"synonyms":[{"name":"5-hydroxyisourate amidohydrolase activity","type":"related"},{"name":"5-hydroxyisourate hydrolase activity","type":"related"},{"name":"HIUHase activity","type":"related"}],"termid":"GO:0033971","terms_by_termid":{"GO:0033971":null}}


id: PBO:0001332
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inherited protein folding defects","termid":"PBO:0001332"}


id: GO:0004772
data:
  {"annotated_genes":["SJAG_04049","SJAG_04059"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78259,82237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034737"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a long-chain fatty acyl-CoA + a sterol = a sterol ester + CoA.","definition_xrefs":["RHEA:59816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acyltransferase activity","termid":"GO:0008374"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"sterol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:2.3.1.26","MetaCyc:RXN-20233","GO:0017066"],"synonyms":[{"name":"sterol-ester synthase activity","type":"related"},{"name":"sterol-ester synthetase activity","type":"related"}],"termid":"GO:0004772","terms_by_termid":{"GO:0034737":null}}


id: GO:0019987
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of anti-apoptosis.","definition_xrefs":["GOC:mtg_apoptosis","GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of anti-apoptosis (obsolete GO:0019987)","synonyms":[{"name":"down regulation of anti-apoptosis","type":"exact"},{"name":"down-regulation of anti-apoptosis","type":"exact"},{"name":"downregulation of anti-apoptosis","type":"exact"},{"name":"inhibition of anti-apoptosis","type":"narrow"},{"name":"negative regulation of anti-apoptosis","type":"exact"}],"termid":"GO:0019987"}


id: PBO:0057642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1233-2","termid":"PBO:0057642"}


id: MONDO:1012319
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"high-frequency tremor, non-human animal","termid":"MONDO:1011796"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high-frequency tremor, macaques","secondary_identifiers":["OMIA:001200-9539"],"termid":"MONDO:1012319","xrefs":{"Monarch":{"xref_id":"1012319"}}}


id: GO:1904289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mitotic DNA damage checkpoint.","definition_xrefs":["GO_REF:0000058","GOC:kmv","GOC:TermGenie","PMID:16549501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle","termid":"GO:0007346"},{"relation_name":"is_a","term_name":"regulation of DNA damage checkpoint","termid":"GO:2000001"},{"relation_name":"regulates","term_name":"mitotic DNA damage checkpoint signaling","termid":"GO:0044773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of mitotic DNA damage checkpoint","termid":"GO:1904289"}


id: FYPO:0002576
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the occurrence of chromatin binding by a gene product (usually a protein) in a mutant is abnormal. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal molecular function","termid":"FYPO:0000707"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"abnormal chromatin binding","termid":"FYPO:0002576"}


id: PBO:0003442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anamorsin family protein, involved in iron-sulphur cluster assembly (predicted)","termid":"PBO:0003442"}


id: MONDO:0850273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A salivary gland carcinoma that is characterized by the presence of large pools of extracellular mucin in which clusters of malignant epithelial cells are found.","definition_xrefs":["DOID:0080800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salivary gland carcinoma","termid":"MONDO:0000521"},{"relation_name":"is_a","term_name":"mucinous adenocarcinoma","termid":"MONDO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"salivary gland mucinous adenocarcinoma","secondary_identifiers":["UMLS:C1882973","NCIT:C62193","MEDGEN:364330"],"termid":"MONDO:0850273","xrefs":{"Monarch":{"xref_id":"0850273"}}}


id: PBO:0063722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PGR antisense RNA 1","termid":"PBO:0063722"}


id: GO:0021773
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a medium spiny neuron residing in the striatum.","definition_xrefs":["ISBN:0878937420","GOC:dph","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron differentiation","termid":"GO:0021879"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"striatum development","termid":"GO:0021756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"striatal medium spiny neuron differentiation","synonyms":[{"name":"medium-sized spiny neuron differentiation","type":"exact"},{"name":"striatal MSN differentiation","type":"exact"}],"termid":"GO:0021773"}


id: PBO:0120882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family zinc finger 1","termid":"PBO:0120882"}


id: PBO:0074766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 2","termid":"PBO:0074766"}


id: GO:0030558
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Specifies the site of pseudouridylation in an RNA molecule by base pairing with a short sequence around the target residue.","definition_xrefs":["GOC:mah","PMID:12457565"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA modification guide activity","termid":"GO:0030555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"RNA pseudouridylation guide activity","termid":"GO:0030558"}


id: PBO:0030243
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_water_deprivation","termid":"PBO:0030243"}


id: PBO:0014288
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meier-Gorlin syndrome","termid":"PBO:0014288"}


id: GO:0051353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidoreductase activity, the catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catalytic activity","termid":"GO:0043085"},{"relation_name":"is_a","term_name":"regulation of oxidoreductase activity","termid":"GO:0051341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidoreductase activity","secondary_identifiers":["GO:0009391"],"synonyms":[{"name":"activation of oxidoreductase activity","type":"narrow"},{"name":"oxidoreductase activator","type":"exact"},{"name":"ribonucleotide reductase activating enzyme activity","type":"narrow"},{"name":"stimulation of oxidoreductase activity","type":"narrow"},{"name":"up regulation of oxidoreductase activity","type":"exact"},{"name":"up-regulation of oxidoreductase activity","type":"exact"},{"name":"upregulation of oxidoreductase activity","type":"exact"}],"termid":"GO:0051353"}


id: GO:0075258
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of teliospore formation, which is the formation of a thick-walled resting or overwintering spore produced by the rust fungi (Uredinales) and smut fungi (Ustilaginales) in which karyogamy occurs.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of asexual sporulation resulting in formation of a cellular spore","termid":"GO:0043944"},{"relation_name":"is_a","term_name":"regulation of teliospore formation","termid":"GO:0075256"},{"relation_name":"negatively_regulates","term_name":"teliospore formation","termid":"GO:0075255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of teliospore formation","termid":"GO:0075258"}


id: PBO:0090794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Coa1","termid":"PBO:0090794"}


id: PBO:0072439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S29 pseudogene 3","termid":"PBO:0072439"}


id: MONDO:0958347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare dysraphic abnormality characterized by the infiltration of fatty tissue localized in the filum terminale, thickens and loses its flexibility, with normal conus shape, regardless of conus level. There is no other spinal cord malformation associated, but it can be associated with extraspinal malformation (ex: anorectal malformation) or syndromic situation.","definition_xrefs":["Orphanet:645325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysraphic spinal cord lipoma","termid":"MONDO:0958260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"isolated filum lipoma","secondary_identifiers":["MEDGEN:1853135","UMLS:C5816720"],"termid":"MONDO:0958347","xrefs":{"Monarch":{"xref_id":"0958347"}}}


id: PBO:0079439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tu translation elongation factor, mitochondrial","termid":"PBO:0079439"}


id: GO:1901133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of kanamycin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00965","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside antibiotic biosynthetic process","termid":"GO:0030648"},{"relation_name":"is_a","term_name":"polyol biosynthetic process","termid":"GO:0046173"},{"relation_name":"is_a","term_name":"kanamycin metabolic process","termid":"GO:1901131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"kanamycin biosynthetic process","synonyms":[{"name":"kanamycin anabolism","type":"exact"},{"name":"kanamycin biosynthesis","type":"exact"},{"name":"kanamycin formation","type":"exact"},{"name":"kanamycin synthesis","type":"exact"}],"termid":"GO:1901133"}


id: MONDO:0957405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulomatous autoinflammatory syndrome of childhood","secondary_identifiers":["Orphanet:324950","UMLS:C5680954","MEDGEN:1842911","GARD:21460"],"termid":"MONDO:0957405","xrefs":{"Monarch":{"xref_id":"0957405"}}}


id: PBO:0116619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA senescence and mitophagy associated regulator of PRKN","termid":"PBO:0116619"}


id: MONDO:0017469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital elbow dislocation","secondary_identifiers":["Orphanet:295032","UMLS:C0265561","GARD:21210","icd11.foundation:1593186141","MEDGEN:539330"],"synonyms":[{"name":"congenital radial head dislocation","type":"exact"},{"name":"isolated congenital elbow dislocation","type":"exact"},{"name":"isolated congenital radial head dislocation","type":"related"}],"termid":"MONDO:0017469","xrefs":{"Monarch":{"xref_id":"0017469"}}}


id: GO:0048090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of establishment of a pattern of pigment in females.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental pigmentation","termid":"GO:0048086"},{"relation_name":"is_a","term_name":"regulation of female pigmentation","termid":"GO:0048089"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"female pigmentation","termid":"GO:0048095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of female pigmentation","synonyms":[{"name":"down regulation of female pigmentation","type":"exact"},{"name":"down-regulation of female pigmentation","type":"exact"},{"name":"downregulation of female pigmentation","type":"exact"},{"name":"inhibition of female pigmentation","type":"narrow"}],"termid":"GO:0048090"}


id: GO:0033933
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->2)-alpha-D-glucosidic linkages at the branch points of dextrans and related polysaccharides, producing free D-glucose.","definition_xrefs":["EC:3.2.1.115"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-glucosidase activity","termid":"GO:0090599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"branched-dextran exo-1,2-alpha-glucosidase activity","secondary_identifiers":["MetaCyc:3.2.1.115-RXN"],"synonyms":[{"name":"1,2-alpha-D-glucosyl-branched-dextran 2-glucohydrolase activity","type":"related"},{"name":"dextran 1,2-alpha-glucosidase activity","type":"related"},{"name":"dextran alpha-1,2 debranching enzyme","type":"related"}],"termid":"GO:0033933"}


id: PBO:0085255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peripheral membrane protein required for autophagic vesicle formation; also required for vesicle formation during pexophagy and the cytoplasm-to-vaucole targeting (Cvt) pathway; involved in Atg9p cycling between the phagophore assembly site and mitochondria; contains an APT1 domain that binds phosphatidylinositol-3-phosphate; essential for cell cycle progression from G2/M to G1 under nitrogen starvation; forms cytoplasmic foci upon DNA replication stress","termid":"PBO:0085255"}


id: FYPO:0003731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing galactose as the carbon source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002058","FYPO:0000003","FYPO:0000257","FYPO:0002060"],"is_obsolete":false,"name":"normal growth on galactose carbon source","synonyms":[{"name":"normal cell population growth on galactose carbon source","type":"exact"},{"name":"normal vegetative cell population growth on galactose carbon source","type":"exact"}],"termid":"FYPO:0003731"}


id: GO:0036333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any biological process involved in the maintenance of the steady-state number of hepatocytes within a population of cells. Hepatocytes are specialized epithelial cells of the liver that are organized into interconnected plates called lobules.","definition_xrefs":["PMID:19878874","GOC:nhn","CL:0000182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"homeostasis of number of cells","termid":"GO:0048872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hepatocyte homeostasis","termid":"GO:0036333"}


id: PBO:0073351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 10","termid":"PBO:0073351"}


id: MOD:02049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-isoleucine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-isoleucine residue","synonyms":[{"name":"XlnkIle","type":"exact"}],"termid":"MOD:02049"}


id: PBO:0011058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-not_occurs_in","termid":"PBO:0011058"}


id: PBO:0081657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 582","termid":"PBO:0081657"}


id: PBO:0069320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 578, pseudogene","termid":"PBO:0069320"}


id: PBO:0080410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37D subunit of ESCRT-I","termid":"PBO:0080410"}


id: MONDO:0004479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that occurs during childhood.","definition_xrefs":["NCIT:C6541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood germ cell tumor","termid":"MONDO:0003751"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant childhood germ cell neoplasm","secondary_identifiers":["DOID:8149","UMLS:C1334574","MEDGEN:233150"],"synonyms":[{"name":"malignant childhood germ cell neoplasm","type":"exact"},{"name":"malignant childhood germ cell tumor","type":"related"},{"name":"malignant childhood germ cell tumour","type":"related"},{"name":"malignant paediatric germ cell neoplasm","type":"related"},{"name":"malignant paediatric germ cell tumour","type":"exact"},{"name":"malignant pediatric germ cell neoplasm","type":"related"},{"name":"malignant pediatric germ cell tumor","type":"exact"}],"termid":"MONDO:0004479","xrefs":{"Monarch":{"xref_id":"0004479"}}}


id: GO:0052242
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in response to a specific chemical concentration gradient within a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete chemotaxis in other organism involved in symbiotic interaction (obsolete GO:0052242)","synonyms":[{"name":"chemotaxis in other organism during symbiotic interaction","type":"related"},{"name":"chemotaxis within other organism during symbiotic interaction","type":"exact"}],"termid":"GO:0052242"}


id: PBO:0026930
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_complex_composition","termid":"PBO:0026930"}


id: GO:0033331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ent-kaur-16-ene. Ent-kaurene is a tetracyclic diterpenoid that is a precursor of several plant isoprenoids, including gibberellins.","definition_xrefs":["PMID:17064690","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene metabolic process","termid":"GO:0042214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"ent-kaurene metabolic process","synonyms":[{"name":"ent-kaurene metabolism","type":"exact"}],"termid":"GO:0033331"}


id: MONDO:0015754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cylindrical spirals myopathy (obsolete MONDO:0015754)","termid":"MONDO:0015754","xrefs":{"Monarch":{"xref_id":"0015754"}}}


id: GO:0052718
data:
  {"annotated_genes":["SJAG_04189","SJAG_00352"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[103131,106252],"is_not":false,"summary":null,"term":"GO:0052718"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses tRNA-specific adenosine-34 deaminase activity. In eukaryotes the complex is a heterodimer; the subunits are known as Tad2p and Tad3p in yeasts and Adat2 and Adat3 in human.","definition_xrefs":["PMID:17875641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00352":null,"SJAG_04189":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA-specific adenosine-34 deaminase complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"tRNA-A34 deaminase complex","type":"exact"}],"termid":"GO:0052718","terms_by_termid":{"GO:0052718":null}}


id: PR:Q10193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- srp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10193"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor srp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11C11.08","synonyms":[{"name":"Spom972h-srp1","type":"exact"}],"termid":"PR:Q10193"}


id: GO:0010351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of lithium ion into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:17270011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"lithium ion transport","synonyms":[{"name":"lithium transport","type":"exact"}],"termid":"GO:0010351"}


id: GO:0047375
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-D-galactosaminoglycan = acetate + D-galactosaminoglycan.","definition_xrefs":["MetaCyc:3.1.1.58-RXN","EC:3.1.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016788","GO:0019213"],"is_obsolete":false,"name":"N-acetylgalactosaminoglycan deacetylase activity","synonyms":[{"name":"N-acetyl galactosaminoglycan deacetylase activity","type":"related"},{"name":"N-acetyl-D-galactosaminoglycan acetylhydrolase activity","type":"related"},{"name":"Vi-polysaccharide deacetylase activity","type":"related"},{"name":"polysaccharide deacetylase activity","type":"related"}],"termid":"GO:0047375"}


id: GO:0043799
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116808],"is_not":false,"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: (1) glycine + H2O + O2 = glyoxylate + NH3 + hydrogen peroxide; (2) D-alanine + H2O + O2 = pyruvate + NH3 + hydrogen peroxide; (3) sarcosine + H2O + O2 = glyoxylate + methylamine + hydrogen peroxide; (4) N-ethylglycine + H2O + O2 = glyoxylate + ethylamine + hydrogen peroxide.","definition_xrefs":["EC:1.4.3.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aliphatic amine oxidase activity","termid":"GO:0052595"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycine oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"glycine:oxygen oxidoreductase (deaminating)","type":"exact"}],"termid":"GO:0043799","terms_by_termid":{"GO:0043799":null}}


id: PBO:0076488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 3","termid":"PBO:0076488"}


id: PBO:0056047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LTV1 ribosome biogenesis factor","termid":"PBO:0056047"}


id: PBO:0018151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC4-like nonhomologous end joining factor, Cernunnon Xlf1/Nej1","termid":"PBO:0018151"}


id: PATO:0002051
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An occurrence which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"occurrence","termid":"PATO:0000057"},{"relation_name":"is_a","term_name":"increased process quality","termid":"PATO:0002304"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased occurrence","synonyms":[{"name":"increased incidence","type":"exact"}],"termid":"PATO:0002051"}


id: GO:1904714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chaperone-mediated autophagy.","definition_xrefs":["GOC:TermGenie","GOC:pad","GOC:PARL","PMID:20176123","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagy","termid":"GO:0010506"},{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"regulates","term_name":"chaperone-mediated autophagy","termid":"GO:0061684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0006914","GO:0008150"],"is_obsolete":false,"name":"regulation of chaperone-mediated autophagy","synonyms":[{"name":"regulation of CMA","type":"related"}],"termid":"GO:1904714"}


id: GO:1901855
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 5,6,7,8-tetrahydrosarcinapterin.","definition_xrefs":["GOC:yaf","UniPathway:UPA00069","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid biosynthetic process","termid":"GO:0072351"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydrosarcinapterin metabolic process","termid":"GO:1901853"},{"relation_name":"is_a","term_name":"tetrahydromethanopterin biosynthetic process","termid":"GO:2001118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0042559"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0042559"],"is_obsolete":false,"name":"5,6,7,8-tetrahydrosarcinapterin biosynthetic process","synonyms":[{"name":"5,6,7,8-tetrahydrosarcinapterin anabolism","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin biosynthesis","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin formation","type":"exact"},{"name":"5,6,7,8-tetrahydrosarcinapterin synthesis","type":"exact"}],"termid":"GO:1901855"}


id: GO:0106418
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + UDP-N-acetyl-alpha-D-muramate + L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate = ADP + phosphate + UDP-N-acetylmuramoyl-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate.","definition_xrefs":["PMID:17384195","PMID:8808921","RHEA:29563"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"UDP-N-acetylmuramate-L-alanyl-gamma-D-glutamyl-meso-2,6-diaminoheptanedioate ligase activity","secondary_identifiers":["EC:6.3.2.45"],"synonyms":[{"name":"murein peptide ligase","type":"related"}],"termid":"GO:0106418"}


id: PBO:0011475
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolysis rate of soluble starch to glucose is 8.9 (mM min-1 ml-2)","termid":"PBO:0011475"}


id: GO:0010486
data:
  {"annotated_genes":["SJAG_04096"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93213],"is_not":false,"summary":null,"term":"GO:0010486"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Mn2+(in) + H+(out) = Mn2+(out) + H+(in).","definition_xrefs":["PMID:17559518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"manganese ion transmembrane transporter activity","termid":"GO:0005384"},{"relation_name":"is_a","term_name":"metal cation:proton antiporter activity","termid":"GO:0051139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04096":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"manganese:proton antiporter activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"manganese:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0010486","terms_by_termid":{"GO:0010486":null}}


id: MONDO:0100504
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A fungal infectious disease that involves the toenail.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tinea infection","termid":"MONDO:0005982"},{"relation_name":"is_a","term_name":"nail infection","termid":"MONDO:0024487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"fungal infection of the toenail","termid":"MONDO:0100504","xrefs":{"Monarch":{"xref_id":"0100504"}}}


id: GO:0010195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of microRNA, a large family of 21-22 nucleotide non-coding RNAs with presumed post-transcriptional regulatory activity.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete microRNA biosynthetic process (obsolete GO:0010195)","synonyms":[{"name":"miRNA biosynthesis","type":"exact"},{"name":"miRNA biosynthetic process","type":"exact"},{"name":"microRNA anabolism","type":"exact"},{"name":"microRNA biosynthesis","type":"exact"},{"name":"microRNA biosynthetic process","type":"exact"},{"name":"microRNA formation","type":"exact"},{"name":"microRNA synthesis","type":"exact"}],"termid":"GO:0010195"}


id: GO:0032339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the regulated release of inhibin from a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inhibin secretion","termid":"GO:0032338"},{"relation_name":"is_a","term_name":"negative regulation of hormone secretion","termid":"GO:0046888"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"inhibin secretion","termid":"GO:0032334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"negative regulation of inhibin secretion","synonyms":[{"name":"down regulation of inhibin secretion","type":"exact"},{"name":"down-regulation of inhibin secretion","type":"exact"},{"name":"downregulation of inhibin secretion","type":"exact"},{"name":"inhibition of inhibin secretion","type":"narrow"}],"termid":"GO:0032339"}


id: GO:1902725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of satellite cell differentiation.","definition_xrefs":["PMID:23212449","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of skeletal muscle cell differentiation","termid":"GO:2001015"},{"relation_name":"negatively_regulates","term_name":"skeletal muscle satellite cell differentiation","termid":"GO:0014816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of satellite cell differentiation","synonyms":[{"name":"down regulation of satellite cell differentiation","type":"exact"},{"name":"down-regulation of satellite cell differentiation","type":"exact"},{"name":"downregulation of satellite cell differentiation","type":"exact"},{"name":"inhibition of satellite cell differentiation","type":"narrow"}],"termid":"GO:1902725"}


id: GO:0048923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a posterior lateral line neuromast hair cell. (N.B. This may be development of neuromast hair cell type or a set of cell of neuromast hair cell type. This will involve the change of a cell or set of cells from one cell identity to another). Hair cells are the sensory receptors of the neuromast and are located in a portion of the neuromast called the sensory strip. Each hair cell of the neuromast is morphologically polarized as a result of the relative position of the single kinocilium and the clusters of stereocilia on its apical surface. There are approximately seven hair cells within each neuromast, with each hair cell innervated by afferent and efferent neurons.","definition_xrefs":["ISBN:0125296509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"},{"relation_name":"part_of","term_name":"posterior lateral line neuromast development","termid":"GO:0048919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"posterior lateral line neuromast hair cell differentiation","termid":"GO:0048923"}


id: GO:0170062
data:
  {"annotated_genes":["SJAG_04041","SJAG_03162","SJAG_02980","SJAG_02763","SJAG_03609","SJAG_01537","SJAG_01180","SJAG_04059","SJAG_01906","SJAG_04049"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90774,96660,114118,116245,63286,120962,113041],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140042"},{"annotations":[92041,121672,111776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019915"}]},"cv_name":"biological_process","definition":"The accumulation and maintenance in cells or tissues of a nutrient, a substance that is used by an organism to survive, to grow, and to reproduce; such as proteins, vitamins, and minerals. Nutrient reserves can be accumulated for mobilization and utilization when needed.","definition_xrefs":["GOC:ew"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nutrient storage","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:26774782":null},"termid":"GO:0170062","terms_by_termid":{"GO:0019915":null,"GO:0140042":null}}


id: PBO:0064666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 1","termid":"PBO:0064666"}


id: PBO:0079411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin beta 8 class VIII pseudogene 5","termid":"PBO:0079411"}


id: GO:0032641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the cytokine lymphotoxin A.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"tumor necrosis factor superfamily cytokine production","termid":"GO:0071706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"lymphotoxin A production","secondary_identifiers":["GO:0042109"],"synonyms":[{"name":"LTA production","type":"exact"},{"name":"TNF-B production","type":"exact"},{"name":"TNF-beta production","type":"exact"},{"name":"lymphotoxin A biosynthetic process","type":"narrow"},{"name":"lymphotoxin A formation","type":"related"},{"name":"lymphotoxin A synthesis","type":"narrow"},{"name":"lymphotoxin-alpha production","type":"exact"},{"name":"tumor necrosis factor-beta production","type":"exact"}],"termid":"GO:0032641"}


id: PBO:0027177
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_exchange_at_pericentric_heterochromatin","termid":"PBO:0027177"}


id: GO:0099625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which ions are transported across the plasma membrane of a ventricular cardiac muscle cell such that the membrane potential changes in the repolarizing direction, toward the steady state potential. For example, the repolarization during an action potential is from a positive membrane potential towards a negative resting potential.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle cell membrane repolarization","termid":"GO:0099622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular cardiac muscle cell membrane repolarization","termid":"GO:0099625"}


id: GO:0050882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of an organism or part of an organism using mechanoreceptors, the nervous system, striated muscle and/or the skeletal system that can be controlled at will.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal movement","termid":"GO:0050881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"voluntary musculoskeletal movement","termid":"GO:0050882"}


id: PR:O94343
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.10c gene.","definition_xrefs":["UniProtKB:O94343","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized MFS-type transporter C1271.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.10c","synonyms":[{"name":"Spom972h-SPBC1271.10c","type":"exact"}],"termid":"PR:O94343"}


id: PR:Q9P4W1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P4W1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase polypeptide VIII, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24C9.16c","synonyms":[{"name":"Spom972h-cox8","type":"exact"}],"termid":"PR:Q9P4W1"}


id: PBO:0074342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 pseudogene 1","termid":"PBO:0074342"}


id: GO:0034490
data:
  {"annotated_genes":["SJAG_04725","SJAG_03256","SJAG_00877","SJAG_02029"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96603],"is_not":false,"summary":null,"term":"GO:0034490"},{"annotations":[105845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[105848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[104818,105849,112074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"}]},"cv_name":"biological_process","definition":"The directed movement of basic amino acids into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane import into vacuole","termid":"GO:0032975"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transport","termid":"GO:1990822"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00877":null,"SJAG_02029":null,"SJAG_03256":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"basic amino acid transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0034490","terms_by_termid":{"GO:0034490":null,"GO:0090513":null,"GO:0090517":null,"GO:0090518":null}}


id: GO:0055108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of proteins from the Golgi to a transport vesicle. Continuously secreted proteins are sorted into transport vesicles that fuse with the plasma membrane, releasing their contents by exocytosis.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"part_of","term_name":"Golgi vesicle transport","termid":"GO:0048193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"Golgi to transport vesicle transport","termid":"GO:0055108"}


id: GO:0034267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving discadenine, (2S)-2-amino-4-{6-[(3-methylbut-2-en-1-yl)amino]-3H-purin-3-yl}butanoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinin metabolic process","termid":"GO:0009690"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"},{"relation_name":"is_a","term_name":"L-amino acid metabolic process","termid":"GO:0170033"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"discadenine metabolic process","synonyms":[{"name":"discadenine metabolism","type":"exact"}],"termid":"GO:0034267"}


id: PBO:0080079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 41","termid":"PBO:0080079"}


id: GO:0052728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-violaxanthin = all-trans-capsorubin.","definition_xrefs":["RHEA:21752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"capsorubin synthase activity","secondary_identifiers":["MetaCyc:RXN-7946"],"synonyms":[{"name":"CCS","type":"broad"},{"name":"capsanthin-capsorubin synthase activity","type":"broad"},{"name":"ketoxanthophyll synthase activity","type":"broad"},{"name":"violaxanthin-capsorubin isomerase (ketone-forming) activity","type":"exact"}],"termid":"GO:0052728"}


id: PBO:0076765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 3","termid":"PBO:0076765"}


id: GO:0045344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class I.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of MHC class I biosynthetic process","termid":"GO:0045343"},{"relation_name":"negatively_regulates","term_name":"MHC class I biosynthetic process","termid":"GO:0045341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of MHC class I biosynthetic process","synonyms":[{"name":"down regulation of MHC class I biosynthetic process","type":"exact"},{"name":"down-regulation of MHC class I biosynthetic process","type":"exact"},{"name":"downregulation of MHC class I biosynthetic process","type":"exact"},{"name":"inhibition of MHC class I biosynthetic process","type":"narrow"},{"name":"negative regulation of MHC class I anabolism","type":"exact"},{"name":"negative regulation of MHC class I biosynthesis","type":"exact"},{"name":"negative regulation of MHC class I formation","type":"exact"},{"name":"negative regulation of MHC class I synthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthesis","type":"exact"},{"name":"negative regulation of major histocompatibility complex class I biosynthetic process","type":"exact"}],"termid":"GO:0045344"}


id: PBO:0065803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB1B, member RAS oncogene family","termid":"PBO:0065803"}


id: MONDO:0971123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinal hemangioblastoma","termid":"MONDO:0003343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"isolated retinal racemose hemangioma","secondary_identifiers":["Orphanet:674924","UMLS:C5890449","MEDGEN:1863667"],"termid":"MONDO:0971123","xrefs":{"Monarch":{"xref_id":"0971123"}}}


id: PBO:0083454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene DAL80","termid":"PBO:0083454"}


id: PBO:0074199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 39 member 9","termid":"PBO:0074199"}


id: PBO:0047294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acyl-CoA reductase 2 pseudogene 1","termid":"PBO:0047294"}


id: PBO:0054370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1764","termid":"PBO:0054370"}


id: PBO:0063608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylformylglycinamidine synthase","termid":"PBO:0063608"}


id: PBO:0054983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2397","termid":"PBO:0054983"}


id: FYPO:0006275
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which pyknosis, the form of chromatin condensation typical of cell death by apoptosis, occurs at a greater frequency than normal when the population in which the cell is found is in stationary phase.","definition_xrefs":["PMID:18653539","PomBase:mah","GO:0030263"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased pyknosis during stationary phase","synonyms":[{"name":"increased apoptotic chromosome condensation during stationary phase","type":"exact"}],"termid":"FYPO:0006275"}


id: GO:0043130
data:
  {"annotated_genes":["SJAG_00941","SJAG_01585","SJAG_01936","SJAG_02912","SJAG_04379","SJAG_02451","SJAG_02116","SJAG_00907","SJAG_03189","SJAG_02833","SJAG_03250","SJAG_00439","SJAG_00312","SJAG_00521","SJAG_02021","SJAG_01051","SJAG_04024","SJAG_03756","SJAG_01134","SJAG_00805","SJAG_00821","SJAG_01467"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58735,61095,62165,62601,63802,67534,68669,70140,73238,74062,74147,75042,75473,76019,77710,78655,79345,79685,80411,80446,81024,81814],"is_not":false,"summary":null,"term":"GO:0043130"}]},"cv_name":"molecular_function","definition":"Binding to ubiquitin, a protein that when covalently bound to other cellular proteins marks them for proteolytic degradation.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein binding","termid":"GO:0032182"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00312":null,"SJAG_00439":null,"SJAG_00521":null,"SJAG_00805":null,"SJAG_00821":null,"SJAG_00907":null,"SJAG_00941":null,"SJAG_01051":null,"SJAG_01134":null,"SJAG_01467":null,"SJAG_01585":null,"SJAG_01936":null,"SJAG_02021":null,"SJAG_02116":null,"SJAG_02451":null,"SJAG_02833":null,"SJAG_02912":null,"SJAG_03189":null,"SJAG_03250":null,"SJAG_03756":null,"SJAG_04024":null,"SJAG_04379":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"ubiquitin binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1169404","Reactome:R-HSA-205008","Reactome:R-HSA-983152"],"termid":"GO:0043130","terms_by_termid":{"GO:0043130":null}}


id: GO:0052386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A type of cell wall modification in which the cell wall is reinforced and made thicker.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall modification","termid":"GO:0042545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150"],"is_obsolete":false,"name":"cell wall thickening","termid":"GO:0052386"}


id: PBO:0083694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Enzyme that mediates the conjugation of Rub1p; a ubiquitin-like protein, to other proteins; related to E2 ubiquitin-conjugating enzymes","termid":"PBO:0083694"}


id: PBO:0004717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F0-ATPase subunit F (predicted)","termid":"PBO:0004717"}


id: MONDO:0700155
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adeonocarcinoma of the thyroid gland occurring in a dog.","definition_xrefs":["NCIT:C132275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma, non-human animal","termid":"MONDO:0700099"},{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine thyroid adenocarcinoma","termid":"MONDO:0700155","xrefs":{"Monarch":{"xref_id":"0700155"}}}


id: GO:0052604
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-methyl-6-phytyl-1,4-benzoquinone = delta-tocopherol.","definition_xrefs":["PMID:12213958"],"gene_count":0,"genotype_count":0,"name":"obsolete delta-tocopherol cyclase activity (obsolete GO:0052604)","termid":"GO:0052604"}


id: MONDO:0000356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Walker-Warburg syndrome (obsolete MONDO:0000356)","termid":"MONDO:0000356","xrefs":{"Monarch":{"xref_id":"0000356"}}}


id: SO:0002188
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene_member_region that encodes sequence that directly contributes to the molecular function of its gene or gene product.","definition_xrefs":["Clingen:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_member_region","termid":"SO:0000831"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_gene_region","synonyms":[{"name":"functional gene region","type":"exact"}],"termid":"SO:0002188"}


id: MONDO:0019977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Parkinsonism with dementia of Guadeloupe is characterized by symmetrical bradykinesia, predominantly axial rigidity, postural instability with early falls and cognitive decline with prominent features of frontal lobe dysfunction.","definition_xrefs":["Orphanet:97355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dementia","termid":"MONDO:0001627"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"parkinsonism with dementia of Guadeloupe","secondary_identifiers":["GARD:19372","ICD10EXP:F02.3*","ICD10EXP:G20+","icd11.foundation:773801248","MEDGEN:899794","SCTID:715737004","UMLS:C4275027"],"termid":"MONDO:0019977","xrefs":{"Monarch":{"xref_id":"0019977"}}}


id: PBO:0055761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA imatinib upregulated","termid":"PBO:0055761"}


id: PBO:0005174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Prp11","termid":"PBO:0005174"}


id: PBO:0068653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 34, pseudogene","termid":"PBO:0068653"}


id: PBO:0070768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L11 pseudogene 4","termid":"PBO:0070768"}


id: MONDO:0005902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Allergic reaction to peanuts that is triggered by the immune system.","definition_xrefs":["MESH:D021183"],"gene_count":0,"genotype_count":0,"name":"obsolete peanut allergic reaction (obsolete MONDO:0005902)","secondary_identifiers":["ICD9:995.3","SCTID:91935009","DOID:4378"],"synonyms":[{"name":"allergy to peanuts","type":"exact"},{"name":"nut allergic reaction of pigmented ciliary epithelial cell","type":"exact"},{"name":"peanut allergic reaction","type":"exact"},{"name":"peanut allergy","type":"related"},{"name":"pigmented ciliary epithelial cell nut allergic reaction","type":"exact"}],"termid":"MONDO:0005902","xrefs":{"Monarch":{"xref_id":"0005902"}}}


id: PBO:0000643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease (predicted)","termid":"PBO:0000643"}


id: PBO:0042890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP418 antisense RNA 1","termid":"PBO:0042890"}


id: PBO:0068909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 152, pseudogene","termid":"PBO:0068909"}


id: PBO:0002788
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.1.5","termid":"PBO:0002788"}


id: MONDO:0005681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0005681 (obsolete MONDO:0005681)","termid":"MONDO:0005681","xrefs":{"Monarch":{"xref_id":"0005681"}}}


id: PBO:0049046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 37","termid":"PBO:0049046"}


id: PBO:0065597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prothymosin alpha pseudogene 13","termid":"PBO:0065597"}


id: GO:1905044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of Schwann cell proliferation involved in axon regeneration.","definition_xrefs":["GO_REF:0000058","GOC:BHF","GOC:rph","GOC:BHF_miRNA","PMID:22393241","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"regulates","term_name":"Schwann cell proliferation involved in axon regeneration","termid":"GO:0014011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of Schwann cell proliferation involved in axon regeneration","termid":"GO:1905044"}


id: GO:0120533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + NAD(P)+ + H2O = (2R)-3-phosphoglycerate + NAD(P)H + 2 H+.","definition_xrefs":["EC:1.2.1.90"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (non-phosphorylating) activity","synonyms":[{"name":"GAPN activity","type":"broad"},{"name":"non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0120533"}


id: GO:0035933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of any glucocorticoid hormone into the circulatory system. Glucocorticoids are a class of steroid hormones that regulate a variety of physiological processes, in particular control of the concentration of glucose in blood.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticosteroid hormone secretion","termid":"GO:0035930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"glucocorticoid secretion","termid":"GO:0035933"}


id: MONDO:0001965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"anterior scleritis","termid":"MONDO:0001804"},{"relation_name":"is_a","term_name":"deep keratitis","termid":"MONDO:0004903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"sclerosing keratitis","secondary_identifiers":["UMLS:C0155090","ICD9:370.54","ICD10CM:H16.33","SCTID:27886001","icd11.foundation:219361296","MEDGEN:509781","DOID:14444"],"synonyms":[{"name":"sclerokeratitis","type":"exact"}],"termid":"MONDO:0001965","xrefs":{"Monarch":{"xref_id":"0001965"}}}


id: GO:0010561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the chemical reactions and pathways resulting in the formation of a glycoprotein, a protein that contains covalently bound glycose (i.e. monosaccharide) residues; the glycose occurs most commonly as oligosaccharide or fairly small polysaccharide but occasionally as monosaccharide.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of macromolecule biosynthetic process","termid":"GO:0010558"},{"relation_name":"is_a","term_name":"regulation of glycoprotein biosynthetic process","termid":"GO:0010559"},{"relation_name":"is_a","term_name":"negative regulation of glycoprotein metabolic process","termid":"GO:1903019"},{"relation_name":"negatively_regulates","term_name":"glycoprotein biosynthetic process","termid":"GO:0009101"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"}


id: PBO:0053615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 654","termid":"PBO:0053615"}


id: GO:0015434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + Cd (cytosol) = ADP + phosphate + Cd (vacuole).","definition_xrefs":["PMID:12455987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cadmium ion transmembrane transporter activity","termid":"GO:0015086"},{"relation_name":"is_a","term_name":"ATPase-coupled monoatomic cation transmembrane transporter activity","termid":"GO:0019829"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type cadmium transporter activity","secondary_identifiers":["MetaCyc:RXN-21035","EC:7.2.2.2"],"synonyms":[{"name":"ATP-dependent cadmium transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled cadmium transmembrane transporter activity","type":"related"},{"name":"cadmium ABC transporter","type":"exact"},{"name":"cadmium-transporting ATPase activity","type":"related"}],"termid":"GO:0015434"}


id: MONDO:0007877
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal adductor paralysis","secondary_identifiers":["MESH:C562861","MEDGEN:140759","OMIM:150270","UMLS:C0396060"],"synonyms":[{"name":"LAP","type":"exact"},{"name":"laryngeal adductor paralysis","type":"exact"},{"name":"vocal cord dysfunction, adductor type","type":"related"}],"termid":"MONDO:0007877","xrefs":{"Monarch":{"xref_id":"0007877"}}}


id: PBO:0038345
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-is_active_in","termid":"PBO:0038345"}


id: PBO:0057551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 664b","termid":"PBO:0057551"}


id: PBO:0047158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 185 member B, pseudogene","termid":"PBO:0047158"}


id: FYPO:0002597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation does not occur. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein modification during vegetative growth","termid":"FYPO:0000544"},{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"},{"relation_name":"is_a","term_name":"abnormal histone H2A phosphorylation during vegetative growth","termid":"FYPO:0002599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002274","FYPO:0001985","FYPO:0002494","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"abolished histone H2A phosphorylation during mitotic cell cycle","type":"related"},{"name":"histone H2A phosphorylation abolished during vegetative growth","type":"exact"},{"name":"histone H2A phosphorylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0002597"}


id: PBO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Csx1 Interacting Protein","termid":"PBO:0000303"}


id: PBO:0113222
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA-binding protein expressed during iron starvation; binds to a sequence element in the 3'-untranslated regions of specific mRNAs to mediate their degradation; involved in iron homeostasis; represses mitochondrial function; protein increases in abundance and relative distribution to the nucleus increases upon DNA replication stress; TIS11 has a paralog, CTH1, that arose from the whole genome duplication","termid":"PBO:0113222"}


id: PBO:0038890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adducin 3","termid":"PBO:0038890"}


id: PBO:0053454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 404","termid":"PBO:0053454"}


id: GO:0035198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a microRNA, a 21-23 nucleotide RNA that is processed from a stem-loop RNA precursor (pre-miRNA) that is encoded within plant and animal genomes.","definition_xrefs":["PMID:15066283"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory RNA binding","termid":"GO:0061980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"miRNA binding","synonyms":[{"name":"microRNA binding","type":"exact"}],"termid":"GO:0035198"}


id: GO:0071890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to bicarbonate ions (CHO3-).","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"bicarbonate binding","synonyms":[{"name":"CHO3- ion binding binding","type":"exact"},{"name":"hydrogencarbonate binding","type":"exact"}],"termid":"GO:0071890"}


id: PBO:0052983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte activating 3","termid":"PBO:0052983"}


id: GO:0032510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to lysosomes by a pathway in which molecules are sorted into multivesicular bodies, which then fuse with the lysosome.","definition_xrefs":["PMID:16689637","PMID:12461556","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to lysosome transport","termid":"GO:0008333"},{"relation_name":"is_a","term_name":"endosome transport via multivesicular body sorting pathway","termid":"GO:0032509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"endosome to lysosome transport via multivesicular body sorting pathway","synonyms":[{"name":"endosome to lysosome transport via MVB sorting pathway","type":"exact"}],"termid":"GO:0032510"}


id: PBO:0014274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6,7-dimethyl-8-ribityllumazine synthase","termid":"PBO:0014274"}


id: MONDO:0000920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the duodenum. Representative examples include carcinoma, lymphoma, and sarcoma.","definition_xrefs":["NCIT:C9328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small intestine cancer","termid":"MONDO:0000956"},{"relation_name":"is_a","term_name":"tumor of duodenum","termid":"MONDO:0021375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"duodenum cancer","secondary_identifiers":["MEDGEN:56301","ICD10CM:C17.0","UMLS:C0153426","SCTID:363403002","MESH:D004379","DOID:10021","ICD9:152.0"],"synonyms":[{"name":"cancer of duodenum","type":"exact"},{"name":"duodenal cancer","type":"exact"},{"name":"duodenum cancer","type":"exact"},{"name":"malignant duodenal neoplasm","type":"exact"},{"name":"malignant duodenal tumor","type":"exact"},{"name":"malignant duodenal tumour","type":"exact"},{"name":"malignant duodenum neoplasm","type":"exact"},{"name":"malignant neoplasm of duodenum","type":"exact"},{"name":"malignant neoplasm of the duodenum","type":"exact"},{"name":"malignant tumor of duodenum","type":"exact"},{"name":"malignant tumor of the duodenum","type":"exact"},{"name":"malignant tumour of duodenum","type":"exact"},{"name":"malignant tumour of the duodenum","type":"exact"}],"termid":"MONDO:0000920","xrefs":{"Monarch":{"xref_id":"0000920"}}}


id: GO:0090516
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105850],"is_not":false,"summary":null,"term":"GO:0090516"}]},"cv_name":"biological_process","definition":"The directed movement of L-serine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine transport","termid":"GO:0015825"},{"relation_name":"is_a","term_name":"neutral amino acid transmembrane import into vacuole","termid":"GO:0034491"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"L-serine transmembrane import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090516","terms_by_termid":{"GO:0090516":null}}


id: PBO:0068079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 385","termid":"PBO:0068079"}


id: MONDO:0003118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon usually benign neoplasm that arises from the testis. It is characterized by the presence of cysts lined by transitional cells and solid nests of transitional cells in a spindle cell stroma.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"},{"relation_name":"is_a","term_name":"Brenner tumor","termid":"MONDO:0024235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular Brenner tumor","secondary_identifiers":["NCIT:C39953","UMLS:C1515281","DOID:4739","MEDGEN:273631"],"synonyms":[{"name":"testes, rudimentary Brenner tumor","type":"exact"},{"name":"testes, rudimentary Brenner tumour","type":"exact"},{"name":"testis Brenner tumor","type":"exact"},{"name":"testis Brenner tumour","type":"exact"}],"termid":"MONDO:0003118","xrefs":{"Monarch":{"xref_id":"0003118"}}}


id: GO:0060195
data:
  {"annotated_genes":["SJAG_00266"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110008],"is_not":false,"summary":null,"term":"GO:0060195"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the synthesis of antisense RNA, an RNA molecule complementary in sequence to another RNA or DNA molecule, which, by binding the latter, acts to inhibit its function and/or completion of synthesis, on a template of DNA.","definition_xrefs":["PMID:18075583","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-templated transcription","termid":"GO:0045892"},{"relation_name":"is_a","term_name":"regulation of antisense RNA transcription","termid":"GO:0060194"},{"relation_name":"negatively_regulates","term_name":"antisense RNA transcription","termid":"GO:0009300"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"negative regulation of antisense RNA transcription","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0060195","terms_by_termid":{"GO:0060195":null}}


id: GO:0070302
data:
  {"annotated_genes":["SJAG_00424","SJAG_01787","SJAG_03705","SJAG_04522","SJAG_02392","SJAG_03263","SJAG_04825","SJAG_03969","SJAG_00610","SJAG_04666","SJAG_05000","SJAG_01114"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105815,109077,120398,97862,101451,109645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903138"},{"annotations":[92777,94427,90091,69627,119971,91446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling via a stress-activated protein kinase signaling cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to stress","termid":"GO:0080135"},{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"stress-activated protein kinase signaling cascade","termid":"GO:0031098"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00610":null,"SJAG_01114":null,"SJAG_01787":null,"SJAG_02392":null,"SJAG_03263":null,"SJAG_03705":null,"SJAG_03969":null,"SJAG_04522":null,"SJAG_04666":null,"SJAG_04825":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of stress-activated protein kinase signaling cascade","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of SAPK signaling pathway","type":"exact"},{"name":"regulation of stress-activated protein kinase signaling pathway","type":"exact"},{"name":"regulation of stress-activated protein kinase signalling pathway","type":"exact"}],"termid":"GO:0070302","terms_by_termid":{"GO:1903138":null,"GO:1903139":null}}


id: GO:0052219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on, within or near a second organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete negative energy taxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052219)","synonyms":[{"name":"negative energy taxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"negative energy taxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052219"}


id: PBO:0068007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 309","termid":"PBO:0068007"}


id: MONDO:0042966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of mitral valve disease that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitral valve disorder","termid":"MONDO:0003767"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"inherited mitral valve disease","secondary_identifiers":["UMLS:C0265845","MEDGEN:539532","SCTID:75372006"],"synonyms":[{"name":"congenital anomaly of mitral valve","type":"exact"},{"name":"congenital malformation of mitral valve","type":"related"},{"name":"congenital mitral valve abnormality","type":"related"},{"name":"hereditary mitral valve disease","type":"exact"}],"termid":"MONDO:0042966","xrefs":{"Monarch":{"xref_id":"0042966"}}}


id: PBO:0042274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 8","termid":"PBO:0042274"}


id: FYPO:0000098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to calcium. Cells stop growing (and may die) at a concentration of calcium ions that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to calcium","synonyms":[{"name":"hypersensitive to calcium","type":"exact"},{"name":"sensitive to calcium chloride","type":"narrow"},{"name":"sensitive to calcium during mitotic cell cycle","type":"related"},{"name":"sensitive to calcium during vegetative growth","type":"exact"},{"name":"sensitive to calcium ions","type":"exact"}],"termid":"FYPO:0000098"}


id: FYPO:0003049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a transcript, i.e. an RNA molecule synthesized on a DNA template by RNA polymerase, is longer than normal due to transcription beyond the normal termination site.","definition_xrefs":["PMID:22582262","PomBase:mah","SO:0000673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcript length","termid":"FYPO:0003048"},{"relation_name":"output_of","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0003048"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0003048","FYPO:0005447"],"is_obsolete":false,"name":"increased transcriptional readthrough","synonyms":[{"name":"3'-extended transcript","type":"related"},{"name":"increased transcript length by 3' extension","type":"related"},{"name":"increased transcript length due to transcriptional readthrough","type":"exact"},{"name":"poly(A) readthrough","type":"related"}],"termid":"FYPO:0003049"}


id: MONDO:0800134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immunodeficiency disease caused by a variation in the CRACR2A gene.","definition_xrefs":["PMID:34908525","PMID:35151051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"primary immunodeficiency due to calcium channel deficiency","termid":"MONDO:0800134","xrefs":{"Monarch":{"xref_id":"0800134"}}}


id: PBO:0068806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 43, pseudogene","termid":"PBO:0068806"}


id: MONDO:0859267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive cancer predisposition syndrome characterized by the onset of various types of tumors or malignancies in young adulthood. The most common clinical manifestations include acute myeloid leukemia (AML), myelodysplastic syndrome, colorectal adenomatous polyposis and carcinoma, and uveal melanoma.","definition_xrefs":["OMIM:619975"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor predisposition syndrome 2","secondary_identifiers":["MEDGEN:1823959","Orphanet:661526","UMLS:C5774186"],"synonyms":[{"name":"MANS","type":"exact"},{"name":"MBD4-associated neoplasia syndrome","type":"exact"},{"name":"MBD4-related recessive tumor predisposition syndrome","type":"exact"},{"name":"TPDS2","type":"exact"}],"termid":"MONDO:0859267","xrefs":{"Monarch":{"xref_id":"0859267"}}}


id: GO:1990663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-dihydroorotate + fumarate = orotate + succinate.","definition_xrefs":["PMID:1409592","RHEA:30059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dihydroorotate dehydrogenase activity","termid":"GO:0004152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"dihydroorotate dehydrogenase (fumarate) activity","secondary_identifiers":["EC:1.3.98.1"],"termid":"GO:1990663"}


id: MONDO:0020410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aorto-ventricular tunnel","termid":"MONDO:0018082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aorto-right ventricular tunnel","secondary_identifiers":["icd11.foundation:1166626076","Orphanet:99070","GARD:19632","MEDGEN:576720","UMLS:C0345055"],"termid":"MONDO:0020410","xrefs":{"Monarch":{"xref_id":"0020410"}}}


id: PBO:0120268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ING5 antisense RNA 1","termid":"PBO:0120268"}


id: GO:0038102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Interacting with an activin receptor complex to reduce the action of another ligand, the agonist. A receptor antagonist does not initiate signaling upon binding to a receptor, but instead blocks an agonist from binding to the receptor.","definition_xrefs":["GOC:signaling","PMID:15062104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor antagonist activity","termid":"GO:0048019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140678"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0140678","GO:0003674","GO:0005515","GO:0098772"],"is_obsolete":false,"name":"activin receptor antagonist activity","termid":"GO:0038102"}


id: MONDO:0006162
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the colon or rectum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C96160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colorectal neoplasm","termid":"MONDO:0005335"},{"relation_name":"is_a","term_name":"intestinal neuroendocrine tumor G1","termid":"MONDO:0021533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colorectal neuroendocrine tumor G1","secondary_identifiers":["UMLS:C3272611","MEDGEN:474244","EFO:1000195"],"synonyms":[{"name":"colorectal NET G1","type":"exact"},{"name":"colorectal carcinoid tumor","type":"exact"},{"name":"colorectal carcinoid tumour","type":"exact"},{"name":"colorectal neuroendocrine tumor G1","type":"exact"},{"name":"colorectum NET G1","type":"exact"},{"name":"colorectum carcinoid tumor","type":"exact"},{"name":"colorectum carcinoid tumour","type":"exact"},{"name":"colorectum neuroendocrine neoplasm G1","type":"exact"},{"name":"colorectum neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of colorectum","type":"exact"},{"name":"large intestinal neuroendocrine tumor G1","type":"exact"},{"name":"large intestinal neuroendocrine tumour G1","type":"exact"}],"termid":"MONDO:0006162","xrefs":{"Monarch":{"xref_id":"0006162"}}}


id: PBO:0089424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane Haemolysin-III family protein involved in zinc homeostasis Izh3","termid":"PBO:0089424"}


id: MONDO:0014372
data:
  {"annotated_genes":["SJAG_01897"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88416],"is_not":false,"summary":null,"term":"MONDO:0014372"}]},"cv_name":"mondo","definition":"Any cone-rod dystrophy in which the cause of the disease is a mutation in the TTLL5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cone-rod dystrophy","termid":"MONDO:0015993"},{"relation_name":"is_a","term_name":"TTLL5-related retinopathy","termid":"MONDO:1040038"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01897":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cone-rod dystrophy 19","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615860","UMLS:C4014501","GARD:16022","DOID:0111025","MEDGEN:862938"],"synonyms":[{"name":"CORD19","type":"exact"},{"name":"TTLL5 cone-rod dystrophy","type":"exact"},{"name":"cone-rod dystrophy 19","type":"exact"},{"name":"cone-rod dystrophy caused by mutation in TTLL5","type":"exact"},{"name":"cone-rod dystrophy type 19","type":"exact"}],"termid":"MONDO:0014372","terms_by_termid":{"MONDO:0014372":null},"xrefs":{"Monarch":{"xref_id":"0014372"}}}


id: GO:2000033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of seed dormancy process.","definition_xrefs":["GOC:pr","ISBN:9781405139830","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of seed maturation","termid":"GO:2000034"},{"relation_name":"regulates","term_name":"seed dormancy process","termid":"GO:0010162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of seed dormancy process","synonyms":[{"name":"regulation of seed dormancy","type":"related"}],"termid":"GO:2000033"}


id: GO:0032562
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dAMP, deoxyadenosine monophosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenyl deoxyribonucleotide binding","termid":"GO:0032558"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dAMP binding","termid":"GO:0032562"}


id: MONDO:0008697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acetophenetidin sensitivity (obsolete MONDO:0008697)","secondary_identifiers":["OMIM:200300"],"synonyms":[{"name":"Acetophenetidin sensitivity","type":"exact"}],"termid":"MONDO:0008697","xrefs":{"Monarch":{"xref_id":"0008697"}}}


id: PBO:0085181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"One of three alternate beta subunits of the Snf1 kinase complex; involved in the response to glucose starvation; null mutants exhibit accelerated aging; N-myristoylprotein localized to the cytoplasm and the plasma membrane; SIP2 has a paralog, GAL83, that arose from the whole genome duplication","termid":"PBO:0085181"}


id: MONDO:0006679
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the opening between the bladder and the urethra resulting in the reduction or prevention of the urine flow from the bladder into the urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder disorder","termid":"MONDO:0006026"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder neck obstruction","secondary_identifiers":["MedDRA:10005053","MESH:D001748","SCTID:399072004","DOID:13948","ICD10CM:N32.0","EFO:1000840","ICD9:596.0","MEDGEN:14151","icd11.foundation:441939472","UMLS:C0005694"],"synonyms":[{"name":"obstruction of bladder neck or vesicourethral orifice","type":"exact"}],"termid":"MONDO:0006679","xrefs":{"Monarch":{"xref_id":"0006679"}}}


id: FYPO:0007205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork arrest at sites within the eukaryotic rDNA repeat spacer is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"},{"relation_name":"is_a","term_name":"DNA metabolism phenotype during vegetative growth","termid":"FYPO:0001346"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal replication fork arrest","termid":"FYPO:0008191"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000293","FYPO:0000257"],"is_obsolete":false,"name":"normal replication fork arrest at rDNA repeats","synonyms":[{"name":"normal replication fork arrest at rDNA repeats during mitotic cell cycle","type":"related"},{"name":"normal replication fork arrest at rDNA repeats during vegetative growth","type":"exact"},{"name":"normal replication fork arrest at ribosomal DNA repeats","type":"exact"}],"termid":"FYPO:0007205"}


id: PBO:0049093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 150","termid":"PBO:0049093"}


id: PBO:0056597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MDH1 pseudogene 2","termid":"PBO:0056597"}


id: PBO:0066301
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 3","termid":"PBO:0066301"}


id: MOD:00680
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds oxygen atoms to a sulfur atom of a residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxygenated residue","termid":"MOD:00676"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur oxygenated residue","synonyms":[{"name":"SOxyRes","type":"exact"}],"termid":"MOD:00680"}


id: PBO:0067031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 44, pseudogene","termid":"PBO:0067031"}


id: PBO:0086698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; localizes to the membrane fraction; possible Zap1p-regulated target gene induced by zinc deficiency; YJL132W is a non-essential gene","termid":"PBO:0086698"}


id: GO:0062026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or decreases the rate, frequency or extent of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process, the chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by the covalent attachment of ubiquitin, with ubiquitin-protein ligation catalyzed by an SCF (Skp1/Cul1/F-box protein) complex, and mediated by the proteasome.","definition_xrefs":["PMID:28007894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032435"},{"relation_name":"is_a","term_name":"regulation of SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0062025"},{"relation_name":"negatively_regulates","term_name":"SCF-dependent proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0031146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"negative regulation of SCF-dependent proteasomal ubiquitin-dependent catabolic process","termid":"GO:0062026"}


id: PBO:0053047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARP4 pseudogene","termid":"PBO:0053047"}


id: GO:0071234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a phenylalanine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to phenylalanine","termid":"GO:0080053"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to phenylalanine","termid":"GO:0071234"}


id: GO:0018716
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-phenanthrol + glucose = 1-phenanthryl-beta-D-glucopyranoside + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-phenanthrol glycosyltransferase activity (obsolete GO:0018716)","termid":"GO:0018716"}


id: PBO:0089462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces japonicus specific 6/7 TM domain protein family","termid":"PBO:0089462"}


id: GO:0102662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-oxopropanoate + coenzyme A(4-) + NAD(1-) = acetyl-CoA(4-) + carbon dioxide + NADH(2-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete malonate-semialdehyde dehydrogenase (acetylating, NAD+) activity (obsolete GO:0102662)","termid":"GO:0102662"}


id: GO:1905310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac neural crest cell migration involved in outflow tract morphogenesis.","definition_xrefs":["GOC:rl","GOC:BHF","GOC:TermGenie","GO_REF:0000058","PMID:17628518"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:0003253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac neural crest cell migration involved in outflow tract morphogenesis","termid":"GO:1905310"}


id: PBO:0062382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily D member 11 pseudogene","termid":"PBO:0062382"}


id: PR:Q9URV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A platelet-activating factor acetylhydrolase 2, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02437","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.11c","secondary_identifiers":["UniProtKB:Q9URV1"],"synonyms":[{"name":"1-alkyl-2-acetylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-acetyl-1-alkylglycerophosphocholine esterase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PAFAH2","type":"exact"}],"termid":"PR:Q9URV1"}


id: GO:0006149
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of deoxyinosine, hypoxanthine deoxyriboside.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyinosine metabolic process","termid":"GO:0046094"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside catabolic process","termid":"GO:0046124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"deoxyinosine catabolic process","synonyms":[{"name":"deoxyinosine breakdown","type":"exact"},{"name":"deoxyinosine catabolism","type":"exact"},{"name":"deoxyinosine degradation","type":"exact"}],"termid":"GO:0006149"}


id: PBO:0069963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1257, pseudogene","termid":"PBO:0069963"}


id: GO:0099643
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any signal release from a synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"part_of","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0023052"],"is_obsolete":false,"name":"signal release from synapse","termid":"GO:0099643"}


id: MONDO:0002647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute or chronic, bacterial or viral inflammatory process affecting the larynx. Signs and symptoms include sore throat, cough, swallowing difficulties, and hoarseness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngitis","secondary_identifiers":["NCIT:C26811","SCTID:45913009","MESH:D007827","UMLS:C0023067","DOID:3437","ICD9:464.00","MEDGEN:7273"],"synonyms":[{"name":"inflammation of larynx","type":"exact"},{"name":"laryngeal Inflammation","type":"exact"},{"name":"laryngeal inflammation","type":"exact"},{"name":"larynx inflammation","type":"exact"}],"termid":"MONDO:0002647","xrefs":{"Monarch":{"xref_id":"0002647"}}}


id: PR:P0CH06
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubi1 gene.","definition_xrefs":["UniProtKB:P0CH06","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-60S ribosomal protein L40-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11G7.04","synonyms":[{"name":"SPAC11G7.04","type":"related"},{"name":"Spom972h-ubi1","type":"exact"}],"termid":"PR:P0CH06"}


id: GO:0050263
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045437"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-D-ribosylpyrimidine + H2O = D-ribose + a pyrimidine.","definition_xrefs":["MetaCyc:RIBOSYLPYRIMIDINE-NUCLEOSIDASE-RXN","EC:3.2.2.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"ribosylpyrimidine nucleosidase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:56816"],"synonyms":[{"name":"N-ribosylpyrimidine nucleosidase activity","type":"related"},{"name":"N-ribosylpyrimidine ribohydrolase activity","type":"related"},{"name":"RihB","type":"related"},{"name":"YeiK","type":"related"},{"name":"nucleoside ribohydrolase activity","type":"broad"},{"name":"pyrimidine nucleosidase activity","type":"related"},{"name":"pyrimidine-nucleoside ribohydrolase activity","type":"related"}],"termid":"GO:0050263","terms_by_termid":{"GO:0045437":null}}


id: FYPO:0007420
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal in telomeric regions. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal transcription at telomere","synonyms":[{"name":"abnormal telomeric transcription","type":"exact"},{"name":"abnormal transcription from telomere","type":"exact"}],"termid":"FYPO:0007420"}


id: PBO:0079064
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon TAC) 4-1","termid":"PBO:0079064"}


id: PBO:0045514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual serine/threonine and tyrosine protein kinase","termid":"PBO:0045514"}


id: GO:0008196
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Receiving vitellogenin, and delivering vitellogenin into the cell via endocytosis.","definition_xrefs":["GOC:bf","PMID:12429745"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cargo receptor activity","termid":"GO:0038024"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038024"}],"interesting_parent_ids":["GO:0038024","GO:0003674"],"is_obsolete":false,"name":"vitellogenin receptor activity","termid":"GO:0008196"}


id: GO:1903438
data:
  {"annotated_genes":["SJAG_00082","SJAG_05290","SJAG_03342","SJAG_04468","SJAG_03936","SJAG_03704","SJAG_03581","SJAG_00514","SJAG_01188","SJAG_02838","SJAG_01114","SJAG_04666","SJAG_04597","SJAG_02392","SJAG_03631","SJAG_01787","SJAG_04776","SJAG_00845","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96421,92008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[115420,89535,112575,96422,96592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[92778,105716,112819,121443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[107209,115421,109078,117534,108416,94428,91880,79886,95815,119955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[96425,94429,89536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic cytokinetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cytokinetic process","termid":"GO:1903436"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cytokinesis","termid":"GO:1903490"},{"relation_name":"positively_regulates","term_name":"mitotic cytokinetic process","termid":"GO:1902410"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000281"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0000281"],"is_obsolete":false,"name":"positive regulation of mitotic cytokinetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null},"synonyms":[{"name":"activation of mitotic cytokinetic process","type":"narrow"},{"name":"up regulation of mitotic cytokinetic process","type":"exact"},{"name":"up-regulation of mitotic cytokinetic process","type":"exact"},{"name":"upregulation of mitotic cytokinetic process","type":"exact"}],"termid":"GO:1903438","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: PBO:0120293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NSE1 component of SMC5/6 complex","termid":"PBO:0120293"}


id: GO:0048208
data:
  {"annotated_genes":["SJAG_04615","SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73424,78290],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0003400"}]},"cv_name":"biological_process","definition":"The addition of COPII proteins and adaptor proteins to ER membranes during the formation of transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:mah","GOC:ascb_2009","GOC:dph","GOC:jid","ISBN:0716731363","PMID:10219233","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle coating","termid":"GO:0006901"},{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"vesicle targeting, rough ER to cis-Golgi","termid":"GO:0048207"},{"relation_name":"part_of","term_name":"COPII-coated vesicle budding","termid":"GO:0090114"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00906":null,"SJAG_04615":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0061024","GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"COPII vesicle coating","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-204005"],"synonyms":[{"name":"COPII coating of ER-derived vesicle","type":"exact"},{"name":"COPII vesicle coat assembly","type":"exact"},{"name":"COPII vesicle coat formation","type":"exact"}],"termid":"GO:0048208","terms_by_termid":{"GO:0003400":null}}


id: PATO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000897 germ line dependent fertility value (obsolete PATO:0000897)","termid":"PATO:0000897"}


id: PBO:0017691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome small subunit biogenesis protein Sgd1 (predicted)","termid":"PBO:0017691"}


id: PBO:0049794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hematopoietic cell-specific Lyn substrate 1","termid":"PBO:0049794"}


id: GO:1904155
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a DN2 thymocyte. A DN2 thymocyte is a CD4-,CD8- thymocyte that is also CD44+,CD25-.","definition_xrefs":["GO_REF:0000086","GOC:TermGenie","GOC:dph","PMID:25398325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation in thymus","termid":"GO:0033077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DN2 thymocyte differentiation","termid":"GO:1904155"}


id: GO:0015079
data:
  {"annotated_genes":["SJAG_04616","SJAG_04167","SJAG_02883","SJAG_03401","SJAG_01353"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74171,72620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140107"},{"annotations":[114407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008900"},{"annotations":[75366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015379"},{"annotations":[81990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"}]},"cv_name":"molecular_function","definition":"Enables the transfer of potassium ions (K+) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transmembrane transporter activity","termid":"GO:0046873"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02883":null,"SJAG_03401":null,"SJAG_04167":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"potassium ion transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0022817","GO:0015388"],"synonyms":[{"name":"potassium transporter activity","type":"exact"},{"name":"potassium uptake permease activity","type":"related"},{"name":"potassium uptake transmembrane transporter activity","type":"related"}],"termid":"GO:0015079","terms_by_termid":{"GO:0008900":null,"GO:0015379":null,"GO:0015386":null,"GO:0140107":null}}


id: PBO:0086415
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative GPI protein; SWAT-GFP and mCherry fusion proteins localize to the vacuole; transcription dependent upon Azf1p","termid":"PBO:0086415"}


id: PBO:0040606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAGE family member 4","termid":"PBO:0040606"}


id: PBO:0075172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNRPE pseudogene 2","termid":"PBO:0075172"}


id: GO:0019206
data:
  {"annotated_genes":["SJAG_03708","SJAG_00533","SJAG_01070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004001"},{"annotations":[94983,116978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043771"},{"annotations":[94984,80973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004849"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nucleoside = ADP + nucleoside monophosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"},{"relation_name":"is_a","term_name":"nucleobase-containing compound kinase activity","termid":"GO:0019205"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00533":null,"SJAG_01070":null,"SJAG_03708":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"nucleoside kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-73599","Reactome:R-HSA-110137","Reactome:R-HSA-110138","Reactome:R-HSA-73632","Reactome:R-HSA-109759","Reactome:R-HSA-109903","Reactome:R-HSA-109671","Reactome:R-HSA-73598"],"termid":"GO:0019206","terms_by_termid":{"GO:0004001":null,"GO:0004849":null,"GO:0043771":null}}


id: PBO:0051967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"imatinib upregulated ABL suppressing lncRNA 1","termid":"PBO:0051967"}


id: MONDO:0008406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal recessive form of Emery-Dreifuss muscular dystrophy.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive Emery-Dreifuss muscular dystrophy (obsolete MONDO:0008406)","secondary_identifiers":["Orphanet:98855"],"synonyms":[{"name":"EDMD3","type":"exact"},{"name":"Emery-Dreifuss muscular dystrophy, autosomal recessive","type":"exact"}],"termid":"MONDO:0008406","xrefs":{"Monarch":{"xref_id":"0008406"}}}


id: PBO:0051433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-15 (pseudogene)","termid":"PBO:0051433"}


id: PR:000044698
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is dimethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00084.","definition_xrefs":["PRO:DAN","PMID:23849629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht1/Me(K9)","termid":"PR:000027578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed K9-dimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/K9me2","type":"exact"}],"termid":"PR:000044698"}


id: PR:O14155
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UPF0047 protein YjbQ that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0047 protein C4A8.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4A8.02c","secondary_identifiers":["UniProtKB:O14155"],"synonyms":[{"name":"Spom972h-yjbQ","type":"exact"}],"termid":"PR:O14155"}


id: PBO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"pathway","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"links stress-activated MAPK (Sty1) pathway to cAMP-dependent protein kinase (Pka1) pathway","termid":"PBO:0002434"}


id: MONDO:0005728
data:
  {"annotated_genes":["SJAG_03786","SJAG_03088"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859571"},{"annotations":[88775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010606"}]},"cv_name":"mondo","definition":"A disease involving the diaphragm.","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03088":null,"SJAG_03786":null},"genotype_count":0,"is_obsolete":false,"name":"diaphragm disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0007233","SCTID:48475001","DOID:10481","UMLS:C0152097","ICD9:519.4","MEDGEN:508886"],"synonyms":[{"name":"diaphragm disease","type":"exact"},{"name":"diaphragm disease or disorder","type":"exact"},{"name":"diaphragmatic disease","type":"related"},{"name":"diaphragmatic disorder","type":"related"},{"name":"disease of diaphragm","type":"exact"},{"name":"disease or disorder of diaphragm","type":"exact"},{"name":"disorder of diaphragm","type":"exact"}],"termid":"MONDO:0005728","terms_by_termid":{"MONDO:0010606":null,"MONDO:0859571":null},"xrefs":{"Monarch":{"xref_id":"0005728"}}}


id: PBO:0034084
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-expressed_in","termid":"PBO:0034084"}


id: PBO:0068976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 220, pseudogene","termid":"PBO:0068976"}


id: PBO:0066802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 101","termid":"PBO:0066802"}


id: PBO:0072774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serum amyloid A3, pseudogene","termid":"PBO:0072774"}


id: PBO:0003053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isocitrate lyase (predicted)","termid":"PBO:0003053"}


id: FYPO:0005767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which replication fork pausing occurs to a greater extent than normal at tRNA genes.","definition_xrefs":["PMID:27611590","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased replication fork pausing","termid":"FYPO:0005763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"increased replication fork pausing at tRNA genes","synonyms":[{"name":"increased replication fork pausing at tRNA genes during mitotic cell cycle","type":"related"},{"name":"increased replication fork pausing at tRNA genes during vegetative growth","type":"exact"},{"name":"increased replication fork pausing at transfer RNA genes","type":"exact"}],"termid":"FYPO:0005767"}


id: GO:0098863
data:
  {"annotated_genes":["SJAG_04387","SJAG_03835","SJAG_03673","SJAG_03073","SJAG_02509","SJAG_04003","SJAG_02737"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72737,76976,103467,109465,111655,116007,119012],"is_not":false,"summary":null,"term":"GO:0098863"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus by pushing forces exerted by polymerization of backward-extending microtubules.","definition_xrefs":["PMID:11309419","GOC:vw","PMID:16611238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear migration","termid":"GO:0007097"},{"relation_name":"is_a","term_name":"microtubule polymerization based movement","termid":"GO:0099098"},{"relation_name":"is_a","term_name":"microtubule-based transport","termid":"GO:0099111"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02509":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"nuclear migration by microtubule mediated pushing forces","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0098863","terms_by_termid":{"GO:0098863":null}}


id: GO:1901618
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of organic hydroxy compound from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organic hydroxy compound transmembrane transporter activity (obsolete GO:1901618)","termid":"GO:1901618"}


id: MONDO:0000108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacteremia, susceptibility","secondary_identifiers":["MEDGEN:482276","UMLS:C3280646"],"termid":"MONDO:0000108","xrefs":{"Monarch":{"xref_id":"0000108"}}}


id: PBO:0034546
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_phosphatidic_acid_level","termid":"PBO:0034546"}


id: PBO:0085853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; mtc3 is synthetically sick with cdc13-1","termid":"PBO:0085853"}


id: PBO:0039788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen receptor","termid":"PBO:0039788"}


id: PBO:0049651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 5","termid":"PBO:0049651"}


id: GO:0010054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a trichoblast, a root epidermal cell that will give rise to a root hair.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"root epidermal cell differentiation","termid":"GO:0010053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trichoblast differentiation","synonyms":[{"name":"trichoblast cell differentiation","type":"exact"}],"termid":"GO:0010054"}


id: PBO:0082806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of U4/U6-U5 snRNP complex; involved in second catalytic step of splicing; participates in spliceosomal assembly through its interaction with U1 snRNA; largest and most evolutionarily conserved protein of the spliceosome; mutations in human ortholog, PRPF8, cause Retinitis pigmentosa and missplicing in Myelodysplastic syndrome; mouse ortholog interacts with androgen receptor and may have a role in prostate cancer","termid":"PBO:0082806"}


id: MONDO:0004905
data:
  {"annotated_genes":["SJAG_03824","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89001,89000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009114"}]},"cv_name":"mondo","definition":"Inherited or acquired disorders of sugar metabolism. Deficiencies of lactase, maltase or sucrase-isomaltase usually occur irreversibly and independent of one another. Congenital deficiencies are rare whereas acquired deficiencies are more common and may be seen following intestinal mucosal brush-border injury. Clinical signs include abdominal cramping, bloating, flatulence and diarrhea following dietary intake of lactose, maltose or sucrose. The clinical course leads to malabsorption of disaccharides which has implications for normal growth and development if manifested at an early age.","definition_xrefs":["EFO:1000060"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"inborn carbohydrate metabolic disorder","termid":"MONDO:0019214"},{"relation_name":"is_a","term_name":"malabsorption syndrome","termid":"MONDO:0020598"},{"relation_name":"is_a","term_name":"carbohydrate metabolism disease","termid":"MONDO:0037792"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02131":null,"SJAG_03824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004335","MONDO:0037792"],"is_obsolete":false,"name":"intestinal disaccharidase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C34731","ICD9:271.3","SCTID:22169002","UMLS:C0699848","MONDO:0006062","DOID:9868","MEDGEN:675093"],"synonyms":[{"name":"intestinal disaccharidase deficiency and disaccharide malabsorption","type":"exact"},{"name":"intestinal disaccharide deficiency and disaccharide malabsorption","type":"related"}],"termid":"MONDO:0004905","terms_by_termid":{"MONDO:0009114":null},"xrefs":{"Monarch":{"xref_id":"0004905"}}}


id: GO:0034002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: geranyl diphosphate = (4R)-limonene + diphosphate.","definition_xrefs":["RHEA:10940","EC:4.2.3.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"(R)-limonene synthase activity","secondary_identifiers":["KEGG_REACTION:R06120","MetaCyc:4.2.3.20-RXN"],"synonyms":[{"name":"(+)-limonene synthase activity","type":"related"},{"name":"geranyl-diphosphate diphosphate-lyase [cyclizing, (+)-(4R)-limonene-forming] activity","type":"related"},{"name":"geranyldiphosphate diphosphate lyase [(+)-(R)-limonene-forming] activity","type":"related"}],"termid":"GO:0034002"}


id: PBO:0048974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 3","termid":"PBO:0048974"}


id: GO:0018553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-(2,3-dihydroxyphenyl)propionate + O2 = 2-hydroxy-6-keto-nona-2,4-dienedioate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-(2,3-dihydroxyphenyl)propionate 1,2-dioxygenase activity (obsolete GO:0018553)","termid":"GO:0018553"}


id: PBO:0087407
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; polyubiquitin binding protein that assists in the dislocation of misfolded, ERAD substrates that are subsequently delivered to the proteasome for degradation; involved in regulated destruction of ER membrane proteins such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); involved in mobilizing membrane bound transcription factors by regulated Ub/proteasome-dependent processing (RUP)","termid":"PBO:0087407"}


id: PBO:0089414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family protein, implicted in mitochondrial ergosterol and phospholipid homeostasis","termid":"PBO:0089414"}


id: GO:0004421
data:
  {"annotated_genes":["SJAG_04499"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[82057],"is_not":false,"summary":null,"term":"GO:0004421"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetoacetyl-CoA + acetyl-CoA + H2O = (S)-3-hydroxy-3-methylglutaryl-CoA + CoA + H+.","definition_xrefs":["RHEA:10188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, acyl groups converted into alkyl on transfer","termid":"GO:0046912"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"hydroxymethylglutaryl-CoA synthase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HYDROXYMETHYLGLUTARYL-COA-SYNTHASE-RXN","Reactome:R-HSA-191323","EC:2.3.3.10","Reactome:R-HSA-73918","KEGG_REACTION:R01978"],"synonyms":[{"name":"(S)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA-acetylating)","type":"related"},{"name":"(s)-3-hydroxy-3-methylglutaryl-CoA acetoacetyl-CoA-lyase (CoA- acetylating) activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl CoA synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl coenzyme A synthetase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-CoA synthase activity","type":"related"},{"name":"3-hydroxy-3-methylglutaryl-coenzyme A synthase activity","type":"related"},{"name":"HMG-CoA synthase activity","type":"related"},{"name":"acetoacetyl coenzyme A transacetase activity","type":"related"},{"name":"acetyl-CoA:acetoacetyl-CoA C-acetyltransferase (thioester-hydrolysing, carboxymethyl-forming)","type":"related"},{"name":"beta-hydroxy-beta-methylglutaryl-CoA synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A synthase activity","type":"related"},{"name":"hydroxymethylglutaryl coenzyme A-condensing enzyme","type":"related"},{"name":"hydroxymethylglutaryl coenzyme alpha-condensing enzyme activity","type":"related"}],"termid":"GO:0004421","terms_by_termid":{"GO:0004421":null}}


id: PBO:0027620
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_on_urea_nitrogen_source","termid":"PBO:0027620"}


id: PBO:0063288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin gamma subfamily B, 2","termid":"PBO:0063288"}


id: PBO:0038559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abl interactor 1 pseudogene 1","termid":"PBO:0038559"}


id: FYPO:0005536
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of an RNA to the nucleus is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal RNA localization","termid":"FYPO:0003058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal RNA localization to nucleus","synonyms":[{"name":"normal RNA localisation to nucleus","type":"exact"},{"name":"normal RNA localization to nucleus during mitotic cell cycle","type":"exact"},{"name":"normal RNA localization to nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0005536"}


id: PBO:0057025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 124-2","termid":"PBO:0057025"}


id: PBO:0058206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4499","termid":"PBO:0058206"}


id: PBO:0068457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 33, pseudogene","termid":"PBO:0068457"}


id: PBO:0113457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of nuclear RNase P; nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs; not shared between RNase MRP and RNase P, in contrast to all other RNase P protein subunits; increases the activity and thermal stability of the complex, along with Pop2p; protein abundance increases in response to DNA replication stress","termid":"PBO:0113457"}


id: PR:Q9Y7Q9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC2H8.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7Q9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolite transporter C2H8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC2H8.02","synonyms":[{"name":"Spom972h-SPCC2H8.02","type":"exact"}],"termid":"PR:Q9Y7Q9"}


id: GO:0051657
data:
  {"annotated_genes":["SJAG_03170","SJAG_01116","SJAG_00053","SJAG_04221"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60014,92417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051685"},{"annotations":[109059,117263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990854"}]},"cv_name":"biological_process","definition":"Any process in which an organelle is maintained in a specific location within a cell and prevented from moving elsewhere.","definition_xrefs":["GOC:dph","GOC:ai","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"organelle localization","termid":"GO:0051640"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_01116":null,"SJAG_03170":null,"SJAG_04221":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"maintenance of organelle location","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"maintenance of organelle localization","type":"related"}],"termid":"GO:0051657","terms_by_termid":{"GO:0051685":null,"GO:1990854":null}}


id: PBO:0082197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Allantoicase; converts allantoate to urea and ureidoglycolate in the second step of allantoin degradation; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation","termid":"PBO:0082197"}


id: PBO:0084035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-anchored cell surface glycoprotein (flocculin); required for pseudohyphal and invasive growth, flocculation, and biofilm formation; major determinant of colony morphology; QTL that controls chronological life span; carries intragenic tandem repeats that are expanded in different strains; required for formation of fibrous interconnections between cells; role in co-flocculation with other yeast species; cleaved and shed from cells, contributing to their surface properties","termid":"PBO:0084035"}


id: PBO:0027749
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_DNA_replication_gene_mRNA_during_nitrogen_starvation","termid":"PBO:0027749"}


id: MONDO:1011546
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intervertebral disc disease that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intervertebral disc disease, non-human animal","termid":"MONDO:1011452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intervertebral disc disease, dog","secondary_identifiers":["OMIA:000157-9615"],"termid":"MONDO:1011546","xrefs":{"Monarch":{"xref_id":"1011546"}}}


id: PBO:0063234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin 20","termid":"PBO:0063234"}


id: _global:results_in_acquisition_of_features_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"The relationship that links a specified entity with the process that results in an unspecified entity acquiring the features and characteristics of the specified entity","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"go_annotation_extension_relation","termid":"_global:go_annotation_extension_relation"},{"relation_name":"is_a","term_name":"results_in_changes_to_anatomical_or_cellular_structure","termid":"_global:results_in_changes_to_anatomical_or_cellular_structure"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_acquisition_of_features_of","secondary_identifiers":["RO:0002315","GOREL:0001014"],"synonyms":[{"name":"results in differentiation of","type":"exact"}],"termid":"_global:results_in_acquisition_of_features_of"}


id: PBO:0012038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo repeat protein, involved in ribosomal large subunit biogenesis (predicted)","termid":"PBO:0012038"}


id: MONDO:0007503
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"microtia","termid":"MONDO:0010920"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ear without helix","secondary_identifiers":["UMLS:C1851899","OMIM:128800","MEDGEN:343678"],"synonyms":[{"name":"ear without helix","type":"exact"}],"termid":"MONDO:0007503","xrefs":{"Monarch":{"xref_id":"0007503"}}}


id: GO:0071155
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex formed by the association of the guanine nucleotide exchange factor synembrin with the alpha(13) subunit of a heterotrimeric G protein.","definition_xrefs":["GOC:mah","PMID:12509430"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"G-protein alpha(13)-synembrin complex","synonyms":[{"name":"Ric-8A G alpha 13 subunit complex","type":"narrow"}],"termid":"GO:0071155"}


id: PBO:0072509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 38","termid":"PBO:0072509"}


id: PBO:0016965
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CORnichon","termid":"PBO:0016965"}


id: GO:0061985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the presence of one carbon source leads to the modulation of the frequency, rate, or extent of the metabolism of other carbon sources.","definition_xrefs":["PMID:29295552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolite repression","termid":"GO:0061984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carbon catabolite repression","termid":"GO:0061985"}


id: PBO:0053503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 486","termid":"PBO:0053503"}


id: MONDO:0016901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 2q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 2. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 2q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 2","termid":"MONDO:0016867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 2","secondary_identifiers":["GARD:3744","icd11.foundation:754787315","UMLS:C0795804","MEDGEN:162770","MESH:C538315","Orphanet:262010"],"synonyms":[{"name":"2q deletion","type":"related"},{"name":"2q monosomy","type":"related"},{"name":"chromosome 2q deletion","type":"related"},{"name":"deletion 2q","type":"related"},{"name":"monosomy 2q","type":"related"},{"name":"partial deletion of chromosome 2q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 2","type":"exact"},{"name":"partial monosomy 2q","type":"related"},{"name":"partial monosomy of chromosome 2q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 2","type":"exact"}],"termid":"MONDO:0016901","xrefs":{"Monarch":{"xref_id":"0016901"}}}


id: PBO:0048876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family member B","termid":"PBO:0048876"}


id: GO:0019701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The methylation of peptidyl-arginine on the internal nitrogen-5 (N5) atom (also called delta-nitrogen) to form peptidyl-N5-methyl-L-arginine.","definition_xrefs":["RESID:AA0305","PMID:9792625","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-arginine N5-methylation (obsolete GO:0019701)","synonyms":[{"name":"peptidyl-arginine delta-N-methylation","type":"exact"}],"termid":"GO:0019701"}


id: PBO:0053413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 351","termid":"PBO:0053413"}


id: SO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature (CNV) are either increased or decreased.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_length_variant","termid":"SO:0002160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_change","synonyms":[{"name":"copy number change","type":"exact"}],"termid":"SO:0001563"}


id: PBO:0083237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; deletion reduces expression of PIS1 gene encoding phosphatidylinositol synthase","termid":"PBO:0083237"}


id: GO:0018257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-lysine to form peptidyl-N6-formyl-L-lysine.","definition_xrefs":["RESID:AA0211"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-lysine formylation (obsolete GO:0018257)","termid":"GO:0018257"}


id: GO:1901019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of calcium ion transmembrane transporter activity.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of calcium ion transmembrane transporter activity (obsolete GO:1901019)","termid":"GO:1901019"}


id: MOD:00756
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-valine residue to 4-hydroxy-D-valine.","definition_xrefs":["PubMed:15853325","RESID:AA0388"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated residue","termid":"MOD:00425"},{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-hydroxy-D-valine","synonyms":[{"name":"(2R,3Xi)-2-amino-4-hydroxy-3-methylbutanoic acid","type":"exact"},{"name":"4-hydroxy-D-valine","type":"exact"},{"name":"D-4HyVal","type":"exact"},{"name":"D-gamma-hydroxyvaline","type":"exact"},{"name":"MOD_RES D-4-hydroxyvaline","type":"exact"}],"termid":"MOD:00756"}


id: PBO:0027361
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_echinocandin","termid":"PBO:0027361"}


id: PBO:0064232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCH1 antisense RNA 2","termid":"PBO:0064232"}


id: PBO:0087593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the ASTRA complex, involved in chromatin remodeling; telomere length regulator involved in the stability or biogenesis of PIKKs such as TORC1","termid":"PBO:0087593"}


id: GO:0010123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The anaerobic chemical reactions and pathways resulting in the breakdown of acetate to form butyrate, ethanol, acetone and butanol.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate catabolic process to butyrate, ethanol, acetone and butanol (obsolete GO:0010123)","synonyms":[{"name":"acetate fermentation to butyrate, ethanol, acetone and butanol","type":"exact"}],"termid":"GO:0010123"}


id: GO:0098952
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the spine apparatus membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of spine apparatus membrane (obsolete GO:0098952)","synonyms":[{"name":"intrinsic to spine apparatus membrane","type":"exact"}],"termid":"GO:0098952"}


id: GO:0045282
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A multimeric complex which consists of flavoprotein (subunit A ; InterPro:IPR003952), iron-sulfur protein (subunit B) and membrane-bound cytochrome b560 (subunit C; InterPro:IPR000701). In some Archaea, the membrane-bound subunits (C or C and D) do not necessarily contain heme. Membrane-bound subunits can bind/react with quinones. Examples of this component are found in Bacterial species.","definition_xrefs":["InterPro:IPR000701","GOC:kd","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane succinate dehydrogenase complex (obsolete GO:0045282)","synonyms":[{"name":"succinate dehydrogenase complex","type":"broad"}],"termid":"GO:0045282"}


id: MONDO:0026754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete histidinuria-renal tubular defect syndrome (obsolete MONDO:0026754)","termid":"MONDO:0026754","xrefs":{"Monarch":{"xref_id":"0026754"}}}


id: GO:0046365
data:
  {"annotated_genes":["SJAG_03818","SJAG_03958","SJAG_04660","SJAG_02945","SJAG_02951","SJAG_00605","SJAG_06621","SJAG_00461","SJAG_01310","SJAG_03660","SJAG_06622","SJAG_03174","SJAG_04192","SJAG_02950","SJAG_02010","SJAG_02135","SJAG_04276","SJAG_02796","SJAG_03373","SJAG_00027","SJAG_02369","SJAG_04334","SJAG_03828","SJAG_02954","SJAG_02009","SJAG_03903","SJAG_00839","SJAG_04495","SJAG_02107"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97031,97762,103202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[74386,111438,111437,105398,79788,107850,118409,105655,111441,107849,111439,107481,111436,100275,100004,111442,107479,111440,96536,107480],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[59235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[97033,97763,103203],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[115791,115779,115780,115773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"},{"annotations":[121108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of monosaccharides, polyhydric alcohols containing either an aldehyde or a keto group and between three to ten or more carbon atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide metabolic process","termid":"GO:0005996"},{"relation_name":"is_a","term_name":"carbohydrate catabolic process","termid":"GO:0016052"},{"relation_name":"is_a","term_name":"small molecule catabolic process","termid":"GO:0044282"}],"gene_count":29,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00839":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02010":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_02950":null,"SJAG_02951":null,"SJAG_02954":null,"SJAG_03174":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03818":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03958":null,"SJAG_04192":null,"SJAG_04276":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04660":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"monosaccharide catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"monosaccharide breakdown","type":"exact"},{"name":"monosaccharide catabolism","type":"exact"},{"name":"monosaccharide degradation","type":"exact"}],"termid":"GO:0046365","terms_by_termid":{"GO:0005998":null,"GO:0019303":null,"GO:0019568":null,"GO:0033499":null,"GO:0042843":null,"GO:0061621":null}}


id: PBO:0087815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIA large subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; required, along with Toa2p, for ribosomal protein gene transcription in vivo; homologous to largest and second largest subunits of human and Drosophila TFIIA","termid":"PBO:0087815"}


id: PBO:0043719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6B1 pseudogene 7","termid":"PBO:0043719"}


id: MOD:01939
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks an aspartic acid and the following cysteine residue with the formation of (2-aminosuccinimidyl)-3-sulfanylpropanoic acid and the loss of a water molecule.","definition_xrefs":["RESID:AA0592#ASP"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid","termid":"MOD:01945"},{"relation_name":"is_a","term_name":"crosslinked L-aspartic acid residue","termid":"MOD:02043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid (Asp)","synonyms":[{"name":"(2R)-2-[(3S)-3-amino-2,5-dioxopyrrolidin-1-yl]-3-sulfanylpropanoic acid","type":"exact"},{"name":"2-(2-aminosuccinimidyl)-3-sulfanylpropanoic acid","type":"exact"},{"name":"aspartimide cysteine","type":"exact"}],"termid":"MOD:01939"}


id: GO:0032945
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of mononuclear cell proliferation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mononuclear cell proliferation","termid":"GO:0032944"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte proliferation","termid":"GO:0070664"},{"relation_name":"negatively_regulates","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mononuclear cell proliferation","synonyms":[{"name":"negative regulation of PBMC proliferation","type":"narrow"},{"name":"negative regulation of peripheral blood mononuclear cell proliferation","type":"narrow"}],"termid":"GO:0032945"}


id: MONDO:0002643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pathological processes of the vestibular labyrinth which contains part of the balancing apparatus. Patients with vestibular diseases show instability and are at risk of frequent falls.","definition_xrefs":["MESH:D015837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear disorder","termid":"MONDO:0002467"},{"relation_name":"is_a","term_name":"neuromuscular disease","termid":"MONDO:0019056"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disorder","secondary_identifiers":["DOID:3426","EFO:0009691","UMLS:C0042594","MEDGEN:12079"],"synonyms":[{"name":"disease of vestibular labyrinth","type":"exact"},{"name":"disease of vestibular system","type":"exact"},{"name":"disease or disorder of vestibular labyrinth","type":"exact"},{"name":"disorder of vestibular labyrinth","type":"exact"},{"name":"disorder of vestibular system","type":"related"},{"name":"vertigo, vestibular disorder","type":"exact"},{"name":"vestibular labyrinth disease","type":"exact"},{"name":"vestibular labyrinth disease or disorder","type":"exact"},{"name":"vestibular system disease","type":"exact"}],"termid":"MONDO:0002643","xrefs":{"Monarch":{"xref_id":"0002643"}}}


id: PBO:0003231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-8 family","termid":"PBO:0003231"}


id: GO:0005623
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The basic structural and functional unit of all organisms. Includes the plasma membrane and any external encapsulating structures such as the cell wall and cell envelope.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell (obsolete GO:0005623)","secondary_identifiers":["Wikipedia:Cell_(biology)","NIF_Subcellular:sao1813327414"],"termid":"GO:0005623"}


id: GO:0140037
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular adaptor that recognizes and binds a target protein containing a SUMO modification and that brings the target protein into contact with another protein to allow those proteins to function in a coordinated way.","definition_xrefs":["PMID:26060076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein reader activity","termid":"GO:0140035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0030674","GO:0060090"],"is_obsolete":false,"name":"SUMO-modified protein reader activity","synonyms":[{"name":"SUMO-dependent protein binding","type":"exact"}],"termid":"GO:0140037"}


id: GO:0034549
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-cyclopropylammelide + H2O = cyclopropylamine + cyanuric acid.","definition_xrefs":["UM-BBD_reactionID:r0827"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"N-cyclopropylammelide alkylamino hydrolase activity","secondary_identifiers":["MetaCyc:RXN-8020","KEGG_REACTION:R06972"],"termid":"GO:0034549"}


id: FYPO:0001181
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of maltose alpha-glucosidase (also known as maltase) activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal alpha-glucosidase activity","termid":"FYPO:0001182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal maltase activity","synonyms":[{"name":"normal maltose alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0001181"}


id: GO:0007197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway initiated by acetylcholine binding to its receptor, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:mah","GOC:dph","GOC:signaling","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-inhibiting G protein-coupled receptor signaling pathway","termid":"GO:0007193"},{"relation_name":"is_a","term_name":"G protein-coupled acetylcholine receptor signaling pathway","termid":"GO:0007213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-inhibiting G protein-coupled acetylcholine receptor signaling pathway","synonyms":[{"name":"inhibition of adenylate cyclase activity by G-protein coupled acetylcholine receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by muscarinic acetylcholine receptor signaling pathway","type":"related"},{"name":"inhibition of adenylate cyclase activity by muscarinic acetylcholine receptor signalling pathway","type":"related"},{"name":"muscarinic acetylcholine receptor, adenylate cyclase inhibiting pathway","type":"exact"},{"name":"muscarinic acetylcholine receptor, adenylyl cyclase inhibiting pathway","type":"exact"}],"termid":"GO:0007197"}


id: PBO:0043946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin beta A1","termid":"PBO:0043946"}


id: PBO:0120379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARNT2 antisense RNA 2","termid":"PBO:0120379"}


id: MONDO:0004370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that affects the sphenocavernous region.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base meningioma","termid":"MONDO:0002998"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenocavernous meningioma","secondary_identifiers":["MEDGEN:234801","UMLS:C1336036","NCIT:C5313","DOID:7820"],"termid":"MONDO:0004370","xrefs":{"Monarch":{"xref_id":"0004370"}}}


id: PBO:0055991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich transmembrane and O-methyltransferase domain containing","termid":"PBO:0055991"}


id: GO:0051604
data:
  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id: PBO:0061281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore associated protein 1 pseudogene 2","termid":"PBO:0061281"}


id: MONDO:0013408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare genetic immunological disease reported in a single consanguineous Pakistani family with several affected members presenting with severe bacterial and viral infections, recurrent hepatopathy (portal inflammation, fibrosis), and recurrent, stereotypical febrile episodes, sometimes lasting several days, with encephalopathy and difficult-to-control seizures. Variable cardiac malformations were also reported. Although there were autoimmune lymphoproliferative syndrome (ALPS)-like biological features, clinical ALPS was not present. A homozygous missense mutation in the FADD gene (11q13.3) was found in the family and the disease is thought to follow an autosomal recessive pattern of inheritance.","definition_xrefs":["Orphanet:306550"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"FADD-related immunodeficiency","secondary_identifiers":["icd11.foundation:440676168","OMIM:613759","MEDGEN:462412","UMLS:C3151062","SCTID:723334006","NANDO:2200741","DOID:0061060","GARD:15004"],"synonyms":[{"name":"FADD-related immunodeficiency","type":"exact"},{"name":"Fadd deficiency","type":"related"},{"name":"immunodeficiency 90 with encephalopathy, functional hyposplenia, and hepatic dysfunction","type":"exact"},{"name":"infections, recurrent, with encephalopathy, hepatic dysfunction, and cardiovascular malformations","type":"related"}],"termid":"MONDO:0013408","xrefs":{"Monarch":{"xref_id":"0013408"}}}


id: MONDO:0006388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, hormonally functioning or non-functioning pituitary gland adenocarcinoma that produces prolactin.","definition_xrefs":["NCIT:C5962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolactin producing pituitary tumor","termid":"MONDO:0003430"},{"relation_name":"is_a","term_name":"pituitary adenocarcinoma","termid":"MONDO:0017582"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prolactin-producing pituitary gland carcinoma","secondary_identifiers":["UMLS:C1334614","EFO:1000497","MEDGEN:277338"],"synonyms":[{"name":"PRL producing pituitary gland carcinoma","type":"exact"},{"name":"malignant pituitary gland prolactinoma","type":"exact"},{"name":"malignant pituitary prolactinoma","type":"exact"},{"name":"malignant prolactin producing neoplasm of pituitary","type":"exact"},{"name":"malignant prolactin producing neoplasm of pituitary gland","type":"exact"},{"name":"malignant prolactin producing neoplasm of the pituitary","type":"exact"},{"name":"malignant prolactin producing neoplasm of the pituitary gland","type":"exact"},{"name":"malignant prolactin producing pituitary gland neoplasm","type":"exact"},{"name":"malignant prolactin producing pituitary gland tumor","type":"exact"},{"name":"malignant prolactin producing pituitary gland tumour","type":"exact"},{"name":"malignant prolactin producing pituitary neoplasm","type":"exact"},{"name":"malignant prolactin producing pituitary tumor","type":"exact"},{"name":"malignant prolactin producing pituitary tumour","type":"exact"},{"name":"malignant prolactin producing tumor","type":"exact"},{"name":"malignant prolactin producing tumor of pituitary","type":"exact"},{"name":"malignant prolactin producing tumor of pituitary gland","type":"exact"},{"name":"malignant prolactin producing tumor of the pituitary","type":"exact"},{"name":"malignant prolactin producing tumor of the pituitary gland","type":"exact"},{"name":"malignant prolactin producing tumour","type":"exact"},{"name":"malignant prolactin producing tumour of pituitary","type":"exact"},{"name":"malignant prolactin producing tumour of pituitary gland","type":"exact"},{"name":"malignant prolactin producing tumour of the pituitary","type":"exact"},{"name":"malignant prolactin producing tumour of the pituitary gland","type":"exact"},{"name":"malignant prolactin secreting neoplasm of pituitary","type":"exact"},{"name":"malignant prolactin secreting neoplasm of pituitary gland","type":"exact"},{"name":"malignant prolactin secreting neoplasm of the pituitary","type":"exact"},{"name":"malignant prolactin secreting neoplasm of the pituitary gland","type":"exact"},{"name":"malignant prolactin secreting pituitary gland neoplasm","type":"exact"},{"name":"malignant prolactin secreting pituitary gland tumor","type":"exact"},{"name":"malignant prolactin secreting pituitary gland tumour","type":"exact"},{"name":"malignant prolactin secreting pituitary neoplasm","type":"exact"},{"name":"malignant prolactin secreting pituitary tumor","type":"exact"},{"name":"malignant prolactin secreting pituitary tumour","type":"exact"},{"name":"malignant prolactin secreting tumor of pituitary","type":"exact"},{"name":"malignant prolactin secreting tumor of pituitary gland","type":"exact"},{"name":"malignant prolactin secreting tumor of the pituitary","type":"exact"},{"name":"malignant prolactin secreting tumor of the pituitary gland","type":"exact"},{"name":"malignant prolactin secreting tumour of pituitary","type":"exact"},{"name":"malignant prolactin secreting tumour of pituitary gland","type":"exact"},{"name":"malignant prolactin secreting tumour of the pituitary","type":"exact"},{"name":"malignant prolactin secreting tumour of the pituitary gland","type":"exact"},{"name":"malignant prolactinoma","type":"exact"},{"name":"malignant prolactinoma of pituitary","type":"exact"},{"name":"malignant prolactinoma of pituitary gland","type":"exact"},{"name":"malignant prolactinoma of the pituitary","type":"exact"},{"name":"malignant prolactinoma of the pituitary gland","type":"exact"},{"name":"prolactin producing pituitary gland carcinoma","type":"exact"},{"name":"prolactin-producing pituitary gland carcinoma","type":"exact"}],"termid":"MONDO:0006388","xrefs":{"Monarch":{"xref_id":"0006388"}}}


id: PBO:0011981
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mutated in Poikiloderma with Neutropenia","termid":"PBO:0011981"}


id: GO:0043889
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction:(2E,6E,10E)-geranylgeranyl diphosphate + sn-glycerol 1-phosphate = diphosphate + sn-3-O-(geranylgeranyl)glycerol 1-phosphate.","definition_xrefs":["PMID:12801917","PMID:8408023","PMID:17253090"],"gene_count":0,"genotype_count":0,"name":"obsolete (S)-3-O-geranylgeranylglyceryl phosphate synthase activity (obsolete GO:0043889)","synonyms":[{"name":"(S)-3-O-geranylgeranylglycerylphosphate synthase activity","type":"exact"},{"name":"(S)-GGGP synthase activity","type":"exact"},{"name":"GGGP synthase activity","type":"exact"},{"name":"GGGPS","type":"exact"}],"termid":"GO:0043889"}


id: PBO:0067767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 67","termid":"PBO:0067767"}


id: PBO:0048371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GAR1 ribonucleoprotein","termid":"PBO:0048371"}


id: GO:1903909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor clustering.","definition_xrefs":["PMID:23575248","GO_REF:0000058","GOC:als","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"receptor clustering","termid":"GO:0043113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor clustering","termid":"GO:1903909"}


id: FYECO:0000335
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which AP20187 was added to the medium or assay buffer.","definition_xrefs":["CHEBI:136847"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ AP20187","termid":"FYECO:0000335"}


id: PBO:0047887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, folic acid type, rare, fra(6)(p23)","termid":"PBO:0047887"}


id: GO:1990218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the abscisic acid levels in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:17304219"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of abscisic acid levels in host (obsolete GO:1990218)","termid":"GO:1990218"}


id: PBO:0081558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 480","termid":"PBO:0081558"}


id: PBO:0052751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 43","termid":"PBO:0052751"}


id: MONDO:0001435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"bullous retinoschisis","secondary_identifiers":["MEDGEN:576202","SCTID:65545003","ICD9:361.12","DOID:12108","UMLS:C0344289"],"termid":"MONDO:0001435","xrefs":{"Monarch":{"xref_id":"0001435"}}}


id: PR:000044697
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.1, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is monomethylation. Example: UniProtKB:P09988-1, 2-136, Lys-10, MOD:00085.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht1/Me(K9)","termid":"PR:000027578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.1, initiator methionine removed K9-monomethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"Spom-hht1/InitMet-/K9me1","type":"exact"}],"termid":"PR:000044697"}


id: MONDO:0006165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare colorectal carcinoma characterized by the presence of a malignant squamous cell infiltrate.","definition_xrefs":["NCIT:C43588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"colorectal carcinoma","termid":"MONDO:0024331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"colorectal squamous cell carcinoma","secondary_identifiers":["EFO:1000198","UMLS:C1707442","MEDGEN:317527"],"synonyms":[{"name":"colorectal (colon or rectal) squamous cell cancer","type":"exact"},{"name":"colorectal squamous cell cancer","type":"exact"},{"name":"colorectal squamous cell carcinoma","type":"exact"},{"name":"colorectum squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006165","xrefs":{"Monarch":{"xref_id":"0006165"}}}


id: PBO:0060846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEGR1 intronic transcript 1","termid":"PBO:0060846"}


id: PBO:0055522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2956","termid":"PBO:0055522"}


id: PBO:0056506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose binding lectin 1, pseudogene","termid":"PBO:0056506"}


id: MONDO:0700027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which chromosome X is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gonosome anomaly","termid":"MONDO:0020058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome X disorder","termid":"MONDO:0700027","xrefs":{"Monarch":{"xref_id":"0700027"}}}


id: GO:0035863
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101002],"is_not":false,"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dITP, a deoxyinosine phosphate compound having a triphosphate group at the 5'-position.","definition_xrefs":["GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide catabolic process","termid":"GO:0009155"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate catabolic process","termid":"GO:0009217"},{"relation_name":"is_a","term_name":"dITP metabolic process","termid":"GO:0035862"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dITP catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2'-Deoxyinosine 5'-triphosphate catabolic process","type":"exact"},{"name":"2'-Deoxyinosine-5'-triphosphate catabolic process","type":"exact"},{"name":"dITP breakdown","type":"exact"},{"name":"dITP catabolism","type":"exact"},{"name":"dITP degradation","type":"exact"},{"name":"deoxyinosine 5'-triphosphate catabolic process","type":"exact"},{"name":"deoxyinosine triphosphate (2'-deoxyinosine 5'-triphosphate) catabolic process","type":"exact"}],"termid":"GO:0035863","terms_by_termid":{"GO:0035863":null}}


id: PBO:0080285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 48 pseudogene","termid":"PBO:0080285"}


id: PBO:0054641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2046","termid":"PBO:0054641"}


id: PBO:0049893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT and RLD domain containing E3 ubiquitin protein ligase 3","termid":"PBO:0049893"}


id: PBO:0117004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IL2RA antisense RNA 1","termid":"PBO:0117004"}


id: GO:0061430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of shaping a trabecula in bone. A trabecula is a tissue element in the form of a small beam, strut or rod.","definition_xrefs":["GOC:dph","GOC:vk","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trabecula morphogenesis","termid":"GO:0061383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bone trabecula morphogenesis","termid":"GO:0061430"}


id: PBO:0018058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DSIF transcription elongation factor complex subunit Spt4","termid":"PBO:0018058"}


id: GO:0019289
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhizobactin 1021, (E)-4-((3-(acetylhydroxyamino)propyl)-amino)-2-hydroxy-(2-(2-(3-(hydroxy(1-oxo-2-decenyl)amino)propyl)amino)-2-oxoethyl)-4-oxobutanoic acid, a siderophore produced by Sinorhizobium meliloti.","definition_xrefs":["PMID:11274118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"tertiary alcohol biosynthetic process","termid":"GO:1902645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"rhizobactin 1021 biosynthetic process","secondary_identifiers":["GO:0031194","MetaCyc:PWY-761","GO:0031193"],"synonyms":[{"name":"rhizobactin 1021 anabolism","type":"exact"},{"name":"rhizobactin 1021 biosynthesis","type":"exact"},{"name":"rhizobactin 1021 biosynthetic process, peptide formation","type":"narrow"},{"name":"rhizobactin 1021 biosynthetic process, peptide modification","type":"narrow"},{"name":"rhizobactin 1021 formation","type":"exact"},{"name":"rhizobactin 1021 synthesis","type":"exact"}],"termid":"GO:0019289"}


id: FYPO:0005690
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which equatorial microtubule organizing center (eMTOC) assembly is abnormal. eMTOC assembly is the aggregation, arrangement and bonding together of a set of components to form an equatorial microtubule organizing center.","definition_xrefs":["GO:1904185","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0001350"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000054"],"is_obsolete":false,"name":"abnormal eMTOC assembly","synonyms":[{"name":"abnormal eMTOC assembly during mitotic cell cycle","type":"related"},{"name":"abnormal eMTOC assembly during vegetative growth","type":"exact"},{"name":"abnormal eMTOC formation","type":"exact"},{"name":"abnormal equatorial microtubule organizing center assembly","type":"exact"},{"name":"abnormal equatorial microtubule organizing center formation","type":"exact"}],"termid":"FYPO:0005690"}


id: GO:0016729
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a CH2 group acts as a hydrogen or electron donor and reduces an acceptor other than disulfide, NAD, NADP or oxygen.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on CH2 groups, other acceptors (obsolete GO:0016729)","synonyms":[{"name":"oxidoreductase activity, acting on CH2 groups, other acceptors","type":"exact"}],"termid":"GO:0016729"}


id: PBO:0056722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meprin A subunit alpha pseudogene 4","termid":"PBO:0056722"}


id: PBO:0048738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase","termid":"PBO:0048738"}


id: GO:0016334
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a polarized follicular epithelial sheet.","definition_xrefs":["GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"},{"relation_name":"part_of","term_name":"morphogenesis of follicular epithelium","termid":"GO:0016333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of polarity of follicular epithelium","termid":"GO:0016334"}


id: GO:1901595
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a hesperadin stimulus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amine","termid":"GO:0014075"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to hesperadin","termid":"GO:1901595"}


id: MONDO:0001439
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"episcleritis periodica fugax","secondary_identifiers":["SCTID:31166000","UMLS:C0155351","icd11.foundation:2091821028","DOID:12124","ICD9:379.01","MEDGEN:509926","ICD10CM:H15.11"],"termid":"MONDO:0001439","xrefs":{"Monarch":{"xref_id":"0001439"}}}


id: PBO:0045619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 31 (pseudogene)","termid":"PBO:0045619"}


id: MONDO:0011128
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89134,89135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032751"}]},"cv_name":"mondo","definition":"Sheldon-Hall syndrome (SHS) is a rare multiple congenital contracture syndrome characterized by contractures of the distal joints of the limbs, triangular face, downslanting palpebral fissures, small mouth, and high arched palate.","definition_xrefs":["Orphanet:1147"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"Sheldon-hall syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1206883656","GARD:16556","UMLS:C1834523","MEDGEN:320374","DOID:0111599"],"synonyms":[{"name":"DA2B","type":"exact"},{"name":"Freeman Sheldon syndrome, variant","type":"related"},{"name":"Freeman Sheldon variant","type":"related"},{"name":"Freeman-Sheldon syndrome variant","type":"exact"},{"name":"Sheldon-Hall syndrome","type":"exact"},{"name":"arthrogryposis multiplex congenita distal type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita distal type II with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type 2B","type":"related"},{"name":"arthrogryposis multiplex congenita, distal, type II, with craniofacial abnormalities","type":"related"},{"name":"arthrogryposis, distal, type 2B","type":"exact"},{"name":"distal arthrogryposis type 2B","type":"exact"}],"termid":"MONDO:0011128","terms_by_termid":{"MONDO:0032751":null},"xrefs":{"Monarch":{"xref_id":"0011128"}}}


id: GO:0001515
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Naturally occurring peptide that is an opioid (any non-alkaloid having an opiate-like effect that can be reversed by naloxone or other recognized morphine antagonist). These include Leu- and Met-enkephalin, dynorphin and neoendorphin, alpha, beta, gamma and delta endorphins formed from beta-lipotropin, various pronase-resistant peptides such as beta casamorphin, and other peptides whose opiate-like action seems to be indirect.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515","GO:0140677","GO:0098772"],"is_obsolete":false,"name":"opioid peptide activity","termid":"GO:0001515"}


id: GO:0047163
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dichloroaniline + malonyl-CoA = N-(3,4-dichlorophenyl)malonamate + CoA.","definition_xrefs":["RHEA:21060","EC:2.3.1.114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"3,4-dichloroaniline N-malonyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04050","MetaCyc:2.3.1.114-RXN"],"synonyms":[{"name":"malonyl-CoA:3,4-dichloroaniline N-malonyltransferase activity","type":"related"}],"termid":"GO:0047163"}


id: MONDO:0009096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary diffuse leukoencephalopathy with axonal spheroids and pigmented glia (obsolete MONDO:0009096)","secondary_identifiers":["NANDO:1200546"],"termid":"MONDO:0009096","xrefs":{"Monarch":{"xref_id":"0009096"}}}


id: GO:1904856
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Any cytoplasmic membrane-bounded vesicle lumen that is part of a cytolytic granule.","definition_xrefs":["PMID:17272266","GOC:TermGenie","PMID:21247065","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar lumen","termid":"GO:0005775"},{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"cytolytic granule","termid":"GO:0044194"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005773"}],"interesting_parent_ids":["GO:0005575","GO:0005773","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"cytolytic granule lumen","synonyms":[{"name":"cytolytic granule cytoplasmic membrane-bounded vesicle lumen","type":"exact"},{"name":"cytoplasmic membrane-bounded vesicle lumen of cytolytic granule","type":"exact"},{"name":"cytoplasmic membrane-enclosed vesicle lumen of cytolytic granule","type":"exact"}],"termid":"GO:1904856"}


id: PBO:0086609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; GFP-fusion protein expression is induced in response to the DNA-damaging agent MMS","termid":"PBO:0086609"}


id: PBO:0003220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid efflux transporter Avt5","termid":"PBO:0003220"}


id: PBO:0017606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swr1 complex subunit Chk1","termid":"PBO:0017606"}


id: PBO:0069431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 696, pseudogene","termid":"PBO:0069431"}


id: MONDO:0043008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of multiple congenital anomalies/dysmorphic syndrome without intellectual disability that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic multiple congenital anomalies/dysmorphic syndrome without intellectual disability (obsolete MONDO:0043008)","secondary_identifiers":["Orphanet:330206"],"synonyms":[{"name":"genetic MCA","type":"exact"},{"name":"genetic multiple congenital anomalies without intellectual disability (with or without dysmorphism)","type":"exact"},{"name":"hereditary multiple congenital anomalies/dysmorphic syndrome without intellectual disability","type":"exact"}],"termid":"MONDO:0043008","xrefs":{"Monarch":{"xref_id":"0043008"}}}


id: GO:0102057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-valine + ATP(4-) + a jasmonic acid = AMP(2-) + diphosphoric acid + a jasmonoyl-valine.","definition_xrefs":["GOC:pz","PMID:17291501"],"gene_count":0,"genotype_count":0,"name":"obsolete jasmonoyl-valine synthetase activity (obsolete GO:0102057)","termid":"GO:0102057"}


id: PBO:0030094
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_bipolar_mitotic_spindle","termid":"PBO:0030094"}


id: GO:0003773
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any of a group of specific proteins that are synthesized by both prokaryotic and eukaryotic cells after they have been exposed to a temperature that is higher than normal. Other stresses, e.g. free radical damage, have a similar effect. Many members of the hsp family are not induced but are present in all cells. They are characterized by their role as molecular chaperones.","definition_xrefs":["ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete heat shock protein activity (obsolete GO:0003773)","synonyms":[{"name":"heat shock protein activity","type":"exact"}],"termid":"GO:0003773"}


id: GO:1902086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of fumagillin.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:23488861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"fumagillin metabolic process","termid":"GO:1902084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"fumagillin biosynthetic process","synonyms":[{"name":"fumagillin anabolism","type":"exact"},{"name":"fumagillin biosynthesis","type":"exact"},{"name":"fumagillin formation","type":"exact"},{"name":"fumagillin synthesis","type":"exact"}],"termid":"GO:1902086"}


id: MONDO:0011887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cataract, congenital, with mental impairment and dentate gyrus atrophy","secondary_identifiers":["MESH:C564353","UMLS:C1843257","MEDGEN:334365","OMIM:607674"],"synonyms":[{"name":"cataract, congenital, with mental impairment and dentate gyrus atrophy","type":"exact"}],"termid":"MONDO:0011887","xrefs":{"Monarch":{"xref_id":"0011887"}}}


id: PBO:0034697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces_specific_protein,_uncharacterized","termid":"PBO:0034697"}


id: PBO:0065543
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pancreas associated transcription factor 1a","termid":"PBO:0065543"}


id: FYECO:0000395
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which micafungin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ echinocandin","termid":"FYECO:0000391"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ micafungin","termid":"FYECO:0000395"}


id: FYPO:0005593
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of inositol phosphorylceramide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular inositol phosphorylceramide level","synonyms":[{"name":"increased cellular IPC level","type":"exact"},{"name":"increased cellular inositol phosphorylceramide level during mitotic cell cycle","type":"related"},{"name":"increased cellular inositol phosphorylceramide level during vegetative growth","type":"exact"},{"name":"increased inositol phosphorylceramide accumulation","type":"related"}],"termid":"FYPO:0005593"}


id: GO:0016739
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for oxidoreductase that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on other substrates (obsolete GO:0016739)","synonyms":[{"name":"oxidoreductase activity, acting on other substrates","type":"exact"}],"termid":"GO:0016739"}


id: PBO:0043620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COMM domain containing 9","termid":"PBO:0043620"}


id: MONDO:0957459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital esophageal stenosis","secondary_identifiers":["MEDGEN:743886","Orphanet:645749","UMLS:C1963580"],"termid":"MONDO:0957459","xrefs":{"Monarch":{"xref_id":"0957459"}}}


id: GO:0110074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apical constriction involved in ventral furrow formation.","definition_xrefs":["PMID:28495958","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110073"},{"relation_name":"is_a","term_name":"positive regulation of actin filament-based movement","termid":"GO:1903116"},{"relation_name":"positively_regulates","term_name":"apical constriction involved in ventral furrow formation","termid":"GO:0110072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of apical constriction involved in ventral furrow formation","termid":"GO:0110074"}


id: PR:Q09832
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA wybutosine-synthesizing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR23245:SF25","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA wybutosine-synthesizing protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.06c","secondary_identifiers":["UniProtKB:Q09832"],"synonyms":[{"name":"SPAC4G8.06c","type":"related"},{"name":"Spom972h-TRMT12","type":"exact"},{"name":"tRNA(Phe) (4-demethylwyosine(37)-C(7)) aminocarboxypropyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA-yW-synthesizing protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tyw2","type":"related"}],"termid":"PR:Q09832"}


id: PBO:0062296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 7 pseudogene","termid":"PBO:0062296"}


id: PBO:0039264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 9 family member A1","termid":"PBO:0039264"}


id: PBO:0041343
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C3orf49 pseudogene 1","termid":"PBO:0041343"}


id: GO:0047831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-ornithine = (2R,4S)-2,4-diaminopentanoate.","definition_xrefs":["RHEA:14893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"D-ornithine 4,5-aminomutase activity","secondary_identifiers":["EC:5.4.3.5","MetaCyc:ORNMUTST-RXN","KEGG_REACTION:R02461"],"synonyms":[{"name":"D-alpha-ornithine 5,4-aminomutase activity","type":"related"},{"name":"D-ornithine aminomutase activity","type":"related"}],"termid":"GO:0047831"}


id: GO:1900303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of laminaritriose transport.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"laminaritriose transport","termid":"GO:2001097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of laminaritriose transport","termid":"GO:1900303"}


id: GO:0072501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of divalent inorganic anions at the level of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular divalent inorganic anion homeostasis (obsolete GO:0072501)","termid":"GO:0072501"}


id: PBO:0016074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid family protease (predicted)","termid":"PBO:0016074"}


id: PBO:0113092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic copper-zinc superoxide dismutase; also sulfide oxidase; detoxifies superoxide and hydrogen sulfide; stabilizes Yck1p and Yck2p kinases in glucose to repress respiration; phosphorylated by Dun1p, enters nucleus under oxidative stress to promote transcription of stress response genes; abundance increases under DNA replication stress; localization to mitochondrial intermembrane space is modulated by MICOS complex; human ortholog SOD1 implicated in ALS complements a null allele","termid":"PBO:0113092"}


id: PBO:0052463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 10","termid":"PBO:0052463"}


id: PBO:0074451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"survival motor neuron domain containing 1","termid":"PBO:0074451"}


id: MONDO:0012849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the CC2D2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome with oculorenal defect","termid":"MONDO:0009480"},{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"Joubert syndrome 9","secondary_identifiers":["DOID:0111004","MESH:C567364","OMIM:612285","GARD:15549","MEDGEN:382940","NCIT:C181002","UMLS:C2676788"],"synonyms":[{"name":"CC2D2A Joubert syndrome","type":"exact"},{"name":"JBTS9","type":"exact"},{"name":"Joubert syndrome 9","type":"exact"},{"name":"Joubert syndrome 9/15, digenic","type":"related"},{"name":"Joubert syndrome caused by mutation in CC2D2A","type":"exact"},{"name":"Joubert syndrome type 9","type":"exact"}],"termid":"MONDO:0012849","xrefs":{"Monarch":{"xref_id":"0012849"}}}


id: PBO:0047332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBLIM1 pseudogene 1","termid":"PBO:0047332"}


id: PBO:0070388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhophilin associated tail protein 1 like","termid":"PBO:0070388"}


id: MONDO:0800142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An immunodeficiency disease caused by a variation in MAPK8, the gene encoding c-Jun N-terminal kinase 1 (JNK1), that is characterized by chronic mucocutaneous candidiasis and a connective tissue disorder that clinically overlaps with Ehlers-Danlos syndrome (EDS).","definition_xrefs":["PMID:31784499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"chronic mucocutaneous candidiasis and connective tissue disease due to JNK1 haploinsufficiency","synonyms":[{"name":"JNK1 haploinsufficiency (causing combination of chronic mucocutaneous candidiasis and connective tissue disease)","type":"exact"}],"termid":"MONDO:0800142","xrefs":{"Monarch":{"xref_id":"0800142"}}}


id: GO:0102222
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: m+q H2O + a 6-phosphogluco-3-phosphogluco-amylopectin = m+q hydrogenphosphate + a 6-phosphogluco-3-phosphogluco-amylopectin.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 6-phosophogluco-3-phosphogluco-starch phosphatase activity (obsolete GO:0102222)","termid":"GO:0102222"}


id: PBO:0113136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"General post-initiation mitochondrial translation factor; peripherally associated with the matrix side of the mitochondrial inner membrane; interacts with mitoribosomal proteins in actively translating cells; human ortholog TACO1 complements the yeast null mutant","termid":"PBO:0113136"}


id: PBO:0078045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 35 (non-functional)","termid":"PBO:0078045"}


id: PBO:0053784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1035","termid":"PBO:0053784"}


id: MONDO:0044242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mydriasis, congenital (obsolete MONDO:0044242)","secondary_identifiers":["OMIM:159420"],"synonyms":[{"name":"mydriasis, congenital","type":"related"}],"termid":"MONDO:0044242","xrefs":{"Monarch":{"xref_id":"0044242"}}}


id: PBO:0051202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 4-30-1","termid":"PBO:0051202"}


id: PBO:0001951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Ace2","termid":"PBO:0001951"}


id: GO:1901141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lignin biosynthetic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"is_a","term_name":"regulation of phenylpropanoid metabolic process","termid":"GO:2000762"},{"relation_name":"regulates","term_name":"lignin biosynthetic process","termid":"GO:0009809"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of lignin biosynthetic process","synonyms":[{"name":"regulation of lignin anabolism","type":"exact"},{"name":"regulation of lignin biosynthesis","type":"exact"},{"name":"regulation of lignin formation","type":"exact"},{"name":"regulation of lignin synthesis","type":"exact"}],"termid":"GO:1901141"}


id: PBO:0088098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Upstream serine/threonine kinase for the SNF1 complex; plays a role in pseudohyphal groth; partially redundant with Elm1p and Tos3p; members of this family have functional orthology with LKB1, a mammalian kinase associated with Peutz-Jeghers cancer-susceptibility syndrome; SAK1 has a paralog, TOS3, that arose from the whole genome duplication","termid":"PBO:0088098"}


id: PBO:0040507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVL9 cell migration associated","termid":"PBO:0040507"}


id: PBO:0109615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA:amino acid N-acyltransferase, pseudogene","termid":"PBO:0109615"}


id: PBO:0059565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 1H like 1","termid":"PBO:0059565"}


id: PBO:0051223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-81 (non-functional)","termid":"PBO:0051223"}


id: PBO:0035793
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_export_from_nucleus_during_glucose_starvation","termid":"PBO:0035793"}


id: GO:1901389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of transforming growth factor beta activation.","definition_xrefs":["GOC:sl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transforming growth factor beta activation (obsolete GO:1901389)","synonyms":[{"name":"down regulation of L-TGF-beta activation","type":"exact"},{"name":"down regulation of TGF-B activation","type":"exact"},{"name":"down regulation of TGF-beta activation","type":"exact"},{"name":"down regulation of TGFB activation","type":"exact"},{"name":"down regulation of TGFbeta activation","type":"exact"},{"name":"down regulation of latent TGF-beta activation","type":"exact"},{"name":"down regulation of transforming growth factor beta activation","type":"exact"},{"name":"down-regulation of L-TGF-beta activation","type":"exact"},{"name":"down-regulation of TGF-B activation","type":"exact"},{"name":"down-regulation of TGF-beta activation","type":"exact"},{"name":"down-regulation of TGFB activation","type":"exact"},{"name":"down-regulation of TGFbeta activation","type":"exact"},{"name":"down-regulation of latent TGF-beta activation","type":"exact"},{"name":"down-regulation of transforming growth factor beta activation","type":"exact"},{"name":"downregulation of L-TGF-beta activation","type":"exact"},{"name":"downregulation of TGF-B activation","type":"exact"},{"name":"downregulation of TGF-beta activation","type":"exact"},{"name":"downregulation of TGFB activation","type":"exact"},{"name":"downregulation of TGFbeta activation","type":"exact"},{"name":"downregulation of latent TGF-beta activation","type":"exact"},{"name":"downregulation of transforming growth factor beta activation","type":"exact"},{"name":"inhibition of L-TGF-beta activation","type":"exact"},{"name":"inhibition of TGF-B activation","type":"exact"},{"name":"inhibition of TGF-beta activation","type":"exact"},{"name":"inhibition of TGFB activation","type":"exact"},{"name":"inhibition of TGFbeta activation","type":"exact"},{"name":"inhibition of latent TGF-beta activation","type":"exact"},{"name":"inhibition of transforming growth factor beta activation","type":"narrow"},{"name":"negative regulation of L-TGF-beta activation","type":"exact"},{"name":"negative regulation of TGF-B activation","type":"exact"},{"name":"negative regulation of TGF-beta activation","type":"exact"},{"name":"negative regulation of TGFB activation","type":"exact"},{"name":"negative regulation of TGFbeta activation","type":"exact"},{"name":"negative regulation of latent TGF-beta activation","type":"exact"}],"termid":"GO:1901389"}


id: MONDO:0007597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor VIII and Factor IX, combined deficiency of","secondary_identifiers":["OMIM:134510","MESH:C565024","UMLS:C1851376","MEDGEN:341994"],"synonyms":[{"name":"F8F9D","type":"related"},{"name":"factor 8 and Factor IX, combined deficiency of","type":"related"},{"name":"factor VIII and Factor IX, combined deficiency of","type":"exact"},{"name":"factor VIII and factor IX, combined deficiency OF","type":"related"},{"name":"familial multiple coagulation Factor deficiency 2","type":"related"}],"termid":"MONDO:0007597","xrefs":{"Monarch":{"xref_id":"0007597"}}}


id: GO:0062029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of stress-granule assembly, the aggregation, arrangement and bonding together of proteins and RNA molecules to form a stress granule.","definition_xrefs":["PMID:20180778"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of stress granule assembly","termid":"GO:0062028"},{"relation_name":"is_a","term_name":"positive regulation of organelle assembly","termid":"GO:1902117"},{"relation_name":"positively_regulates","term_name":"stress granule assembly","termid":"GO:0034063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of stress granule assembly","termid":"GO:0062029"}


id: GO:0033176
data:
  {"annotated_genes":["SJAG_04015","SJAG_00136","SJAG_01447","SJAG_02023","SJAG_00516","SJAG_02782","SJAG_03406","SJAG_01397","SJAG_00212","SJAG_01913","SJAG_03962","SJAG_01471","SJAG_04955","SJAG_01817","SJAG_05294"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[105924,101961,94064,62952,92167,97841,97661],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000220"},{"annotations":[98622,61314,73169,90042,120808,111917,100928,104685],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A proton-transporting two-sector ATPase complex that couples ATP hydrolysis to the transport of protons across a concentration gradient. The resulting transmembrane electrochemical potential of H+ is used to drive a variety of (i) secondary active transport systems via H+-dependent symporters and antiporters and (ii) channel-mediated transport systems. The complex comprises a membrane sector (V0) that carries out proton transport and a cytoplasmic compartment sector (V1) that catalyzes ATP hydrolysis. V-type ATPases are found in the membranes of organelles such as vacuoles, endosomes, and lysosomes, and in the plasma membrane.","definition_xrefs":["ISBN:0716743663","PMID:16449553","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"},{"relation_name":"is_a","term_name":"cation-transporting ATPase complex","termid":"GO:0090533"},{"relation_name":"is_a","term_name":"ATPase complex","termid":"GO:1904949"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00516":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_02023":null,"SJAG_02782":null,"SJAG_03406":null,"SJAG_03962":null,"SJAG_04015":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proton-transporting V-type ATPase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"hydrogen-translocating V-type ATPase complex","type":"exact"}],"termid":"GO:0033176","terms_by_termid":{"GO:0000220":null,"GO:0000221":null}}


id: MONDO:0021783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the throat due to Streptococcus pyogenes.","definition_xrefs":["NCIT:C116003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharyngitis","termid":"MONDO:0002258"},{"relation_name":"is_a","term_name":"streptococcal infection","termid":"MONDO:0021680"},{"relation_name":"is_a","term_name":"respiratory tract infectious disorder","termid":"MONDO:0024355"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"streptococcal sore throat","secondary_identifiers":["ICD10CM:J02.0","SCTID:43878008","MEDGEN:508129","ICD9:034.0","UMLS:C0036689"],"synonyms":[{"name":"Septic sore throat","type":"related"},{"name":"Strep throat","type":"related"},{"name":"Strept throat","type":"related"},{"name":"Streptococcal Pharyngitis","type":"related"},{"name":"Streptococcal angina","type":"related"},{"name":"Streptococcal pharyngitis","type":"related"},{"name":"Streptococcal sore throat","type":"related"},{"name":"strep throat","type":"exact"},{"name":"streptococcal pharyngitis","type":"exact"}],"termid":"MONDO:0021783","xrefs":{"Monarch":{"xref_id":"0021783"}}}


id: PBO:0076023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 19","termid":"PBO:0076023"}


id: GO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to nucleic acid via hydrogen bonds between the bases of a gene product molecule and the bases of a target DNA molecule.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"},{"relation_name":"is_a","term_name":"molecular template activity","termid":"GO:0140489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"DNA template activity","synonyms":[{"name":"base pairing with DNA","type":"related"}],"termid":"GO:0000497"}


id: GO:0090105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a pancreatic E cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell development","termid":"GO:0002064"},{"relation_name":"part_of","term_name":"pancreatic epsilon cell differentiation","termid":"GO:0090104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic E cell development","termid":"GO:0090105"}


id: PBO:0005577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L39","termid":"PBO:0005577"}


id: GO:0090022
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of neutrophil chemotaxis. Neutrophil chemotaxis is the directed movement of a neutrophil cell, the most numerous polymorphonuclear leukocyte found in the blood, in response to an external stimulus, usually an infection or wounding.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granulocyte chemotaxis","termid":"GO:0071622"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"regulates","term_name":"neutrophil chemotaxis","termid":"GO:0030593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil chemotaxis","termid":"GO:0090022"}


id: PBO:0088955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease catalytic subunit Sen34","termid":"PBO:0088955"}


id: GO:0032310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of a prostaglandin, any of a group of biologically active metabolites which contain a cyclopentane ring, from a cell or a tissue.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostaglandin transport","termid":"GO:0015732"},{"relation_name":"is_a","term_name":"signal release","termid":"GO:0023061"},{"relation_name":"is_a","term_name":"icosanoid secretion","termid":"GO:0032309"},{"relation_name":"is_a","term_name":"lipid export from cell","termid":"GO:0140353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"prostaglandin secretion","synonyms":[{"name":"prostacyclin secretion","type":"narrow"}],"termid":"GO:0032310"}


id: PBO:0046680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"embryonic testis differentiation homolog B","termid":"PBO:0046680"}


id: GO:0022413
data:
  {"annotated_genes":["SJAG_02079","SJAG_03250","SJAG_01465","SJAG_01677","SJAG_00769","SJAG_03057","SJAG_01943","SJAG_02226","SJAG_04859","SJAG_03587","SJAG_01662","SJAG_04781","SJAG_05309","SJAG_02351","SJAG_04853","SJAG_02529","SJAG_00114","SJAG_00821","SJAG_04615","SJAG_04271","SJAG_01410","SJAG_04236","SJAG_04887","SJAG_02924","SJAG_00971","SJAG_00486","SJAG_00293","SJAG_00757","SJAG_00993","SJAG_02556","SJAG_02460","SJAG_02878","SJAG_00870","SJAG_03746","SJAG_00405","SJAG_05239","SJAG_02828","SJAG_04483","SJAG_00663","SJAG_01495","SJAG_02320","SJAG_04010","SJAG_00399","SJAG_03090","SJAG_04901","SJAG_00247","SJAG_01068","SJAG_03221","SJAG_04080","SJAG_01076","SJAG_00073","SJAG_03688","SJAG_04982","SJAG_04922","SJAG_02712","SJAG_02241","SJAG_04140","SJAG_02319","SJAG_04184","SJAG_02169","SJAG_02248","SJAG_01601","SJAG_01531","SJAG_03006","SJAG_01419","SJAG_03097","SJAG_04275","SJAG_03013","SJAG_03557","SJAG_00826","SJAG_03483","SJAG_04868","SJAG_04470","SJAG_00974","SJAG_00320","SJAG_03915","SJAG_02401","SJAG_02724","SJAG_03997","SJAG_04238","SJAG_01769","SJAG_01483","SJAG_03536","SJAG_01321"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98531,114768,113565,107151,98946,102747],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030437"},{"annotations":[96475],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[93784,92255,90219,90709],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[106187,116140,111113,119853,119845],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[107003,74953,93511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[99600,100842,101921,103729,99563,120616,109420,120917,97385,121100,115988,107315,112162,93300],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[109751,98880,94301,108865,99564,101850,115989,106145,101851,104936],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[99734,94522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000755"},{"annotations":[120926,118597,93247,89938,95397,101130,118909,118269],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007535"},{"annotations":[99431,89939,120845,108098,108665,117082,112872,102602,91174,91301,101131,112350,118862,98190,110551],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0007534"},{"annotations":[101069,98661,94687],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007533"},{"annotations":[61544,104973,110552,96090],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:0071515"},{"annotations":[113253],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[79735,94363,112241,97306,98387],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032220"},{"annotations":[104304],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[92735],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[94197],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[95362],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071171"},{"annotations":[102140,101852,108042,96516,101853,118031],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"A process, occurring at the cellular level, that is involved in the reproductive function of a single-celled organism.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive 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process in single-celled organism","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0022413","terms_by_termid":{"GO:0000755":null,"GO:0007533":null,"GO:0007534":null,"GO:0007535":null,"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0032220":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0071171":null,"GO:0071515":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0006052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of N-acetylmannosamine, the acetylated derivative of mannosamine, 2-amino-2-deoxymannose.","definition_xrefs":["ISBN:0198506732","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylmannosamine metabolic process","termid":"GO:0006051"},{"relation_name":"is_a","term_name":"mannosamine biosynthetic process","termid":"GO:0046347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-acetylmannosamine biosynthetic process","synonyms":[{"name":"N-acetylmannosamine anabolism","type":"exact"},{"name":"N-acetylmannosamine biosynthesis","type":"exact"},{"name":"N-acetylmannosamine formation","type":"exact"},{"name":"N-acetylmannosamine synthesis","type":"exact"}],"termid":"GO:0006052"}


id: GO:0021725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the superior raphe nucleus over time, from its formation to the mature structure.","definition_xrefs":["ZFA:0000440","GOC:curators","GO_REF:0000021","GOC:cvs","GOC:jid","PMID:19003874","GOC:cjm","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural nucleus development","termid":"GO:0048857"},{"relation_name":"part_of","term_name":"medullary reticular formation development","termid":"GO:0021723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superior raphe nucleus development","synonyms":[{"name":"anterior raphe nucleus development","type":"broad"},{"name":"superior central nucleus development","type":"broad"}],"termid":"GO:0021725"}


id: MONDO:0014509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any vitelliform macular dystrophy in which the cause of the disease is a mutation in the IMPG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adult-onset foveomacular vitelliform dystrophy","termid":"MONDO:0011979"},{"relation_name":"is_a","term_name":"IMPG2-related dominant retinopathy","termid":"MONDO:0700242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitelliform macular dystrophy 5","secondary_identifiers":["GARD:16065","UMLS:C4015343","OMIM:616152","MEDGEN:863780"],"synonyms":[{"name":"IMPG2 vitelliform macular dystrophy","type":"exact"},{"name":"VMD5","type":"related"},{"name":"macular dystrophy, vitelliform, 5","type":"exact"},{"name":"macular dystrophy, vitelliform, type 5","type":"exact"},{"name":"vitelliform macular dystrophy caused by mutation in IMPG2","type":"exact"}],"termid":"MONDO:0014509","xrefs":{"Monarch":{"xref_id":"0014509"}}}


id: PBO:0084789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein; likely involved in translation of the mitochondrial OLI1 mRNA; exhibits genetic interaction with the OLI1 mRNA 5'-untranslated leader","termid":"PBO:0084789"}


id: PBO:0030171
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_resolution_of_meiotic_recombination_intermediates_with_crossover_formation","termid":"PBO:0030171"}


id: PBO:0083374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially/completely overlaps the verified ORF CTR","termid":"PBO:0083374"}


id: PBO:0049785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HLA complex group 20","termid":"PBO:0049785"}


id: GO:0008886
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glyceraldehyde 3-phosphate + H2O + NADP+ = 3-phospho-D-glycerate + 2 H+ + NADPH.","definition_xrefs":["RHEA:14669","EC:1.2.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glyceraldehyde-3-phosphate dehydrogenase [NAD(P)+] (non-phosphorylating) activity","termid":"GO:0120533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP+) (non-phosphorylating) activity","secondary_identifiers":["KEGG_REACTION:R01058","MetaCyc:1.2.1.9-RXN"],"synonyms":[{"name":"D-glyceraldehyde-3-phosphate:NADP+ oxidoreductase activity","type":"exact"},{"name":"NADP-glyceraldehyde phosphate dehydrogenase","type":"broad"},{"name":"NADP-glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"dehydrogenase, glyceraldehyde phosphate (nicotinamide adenine dinucleotide phosphate)","type":"broad"},{"name":"glyceraldehyde 3-phosphate dehydrogenase (NADP)","type":"exact"},{"name":"glyceraldehyde phosphate dehydrogenase (NADP)","type":"broad"},{"name":"glyceraldehyde-3-phosphate dehydrogenase (NADP)","type":"exact"},{"name":"glyceraldehyde-3-phosphate:NADP reductase activity","type":"exact"},{"name":"nonphosphorylating glyceraldehyde-3-phosphate dehydrogenase activity","type":"exact"},{"name":"triosephosphate dehydrogenase activity","type":"broad"}],"termid":"GO:0008886"}


id: PBO:0045137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynein axonemal assembly factor 5","termid":"PBO:0045137"}


id: FYPO:0002409
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and undergoes a single round of cell division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination with elongated germ tube","termid":"FYPO:0000314"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division, abnormal cell shape","termid":"FYPO:0002420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000004","FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, with elongated germ tube","synonyms":[{"name":"inviable after spore germination, single cell division, elongated cell","type":"exact"},{"name":"inviable following spore germination, single cell division, with elongated, germ tube","type":"exact"},{"name":"inviable germinated spore, single cell division, with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, single cell division, with elongated germ tube","type":"exact"}],"termid":"FYPO:0002409"}


id: PBO:0076737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-complex 10 like 3, pseudogene","termid":"PBO:0076737"}


id: GO:0042896
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of chloramphenicol, a broad-spectrum antibiotic that inhibits bacterial protein synthesis, from one side of a membrane to the other.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"},{"relation_name":"is_a","term_name":"amide transmembrane transporter activity","termid":"GO:0042887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"chloramphenicol transmembrane transporter activity","synonyms":[{"name":"chloramphenicol transporter activity","type":"related"}],"termid":"GO:0042896"}


id: GO:0051537
data:
  {"annotated_genes":["SJAG_00601","SJAG_02495","SJAG_00244","SJAG_00455","SJAG_00260","SJAG_04016","SJAG_04397","SJAG_00792","SJAG_02474","SJAG_00532","SJAG_01417","SJAG_01841","SJAG_03701","SJAG_00822","SJAG_01935","SJAG_02016","SJAG_00217","SJAG_04098"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59188,65222,67128,67984,69028,71150,71198,73337,76231,80124,81273,81786,90071,96071,102510,116800,117112,118698],"is_not":false,"summary":null,"term":"GO:0051537"}]},"cv_name":"molecular_function","definition":"Binding to a 2 iron, 2 sulfur (2Fe-2S) cluster; this cluster consists of two iron atoms, with two inorganic sulfur atoms found between the irons and acting as bridging ligands.","definition_xrefs":["GOC:ai","Wikipedia:Iron-sulfur_cluster","PMID:15952888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster binding","termid":"GO:0051536"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00217":null,"SJAG_00244":null,"SJAG_00260":null,"SJAG_00455":null,"SJAG_00532":null,"SJAG_00601":null,"SJAG_00792":null,"SJAG_00822":null,"SJAG_01417":null,"SJAG_01841":null,"SJAG_01935":null,"SJAG_02016":null,"SJAG_02474":null,"SJAG_02495":null,"SJAG_03701":null,"SJAG_04016":null,"SJAG_04098":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"2 iron, 2 sulfur cluster binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"2 Fe 2 S cluster binding","type":"exact"},{"name":"2 iron, 2 sulphur cluster binding","type":"exact"},{"name":"2Fe-2S cluster binding","type":"exact"},{"name":"diiron disulfide cluster binding","type":"exact"},{"name":"diiron disulphide cluster binding","type":"exact"},{"name":"iron-sulfur cluster 2Fe-2S binding","type":"exact"},{"name":"iron-sulphur cluster 2Fe-2S binding","type":"exact"}],"termid":"GO:0051537","terms_by_termid":{"GO:0051537":null}}


id: PBO:0075538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"speedy/RINGO cell cycle regulator family member E18","termid":"PBO:0075538"}


id: PBO:0071012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 14","termid":"PBO:0071012"}


id: SO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Consensus region of primary transcript bordering junction of splicing. A region that overlaps exactly 2 base and adjacent_to splice_junction.","definition_xrefs":["SO:ke","SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary_transcript_region","termid":"SO:0000835"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_site","secondary_identifiers":["http://en.wikipedia.org/wiki/Splice_site"],"synonyms":[{"name":"splice site","type":"exact"}],"termid":"SO:0000162"}


id: GO:0042610
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CD8, a receptor found on the surface of thymocytes and cytotoxic and suppressor T-lymphocytes.","definition_xrefs":["MSH:D016827","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CD8 receptor binding","termid":"GO:0042610"}


id: PBO:0089111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein involved in export of mRNAs Hrb1","termid":"PBO:0089111"}


id: PBO:0046928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 47 member B","termid":"PBO:0046928"}


id: GO:0140875
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of PR-toxin, a bicyclic sesquiterpene belonging to the eremophilane class and acting as a mycotoxin.","definition_xrefs":["PMID:27921136","PMID:24239699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"PR-toxin biosynthetic process","synonyms":[{"name":"PR-toxin anabolism","type":"exact"},{"name":"PR-toxin biosynthesis","type":"exact"},{"name":"PR-toxin formation","type":"exact"},{"name":"PR-toxin synthesis","type":"exact"}],"termid":"GO:0140875"}


id: PBO:0074149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member D2","termid":"PBO:0074149"}


id: PBO:0067924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 226","termid":"PBO:0067924"}


id: FYPO:0001038
data:
  {"alleles_by_uniquename":{"SJAG_01787:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01787","name":"pck1delta","uniquename":"SJAG_01787:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121278],"is_not":false,"summary":null,"term":"FYPO:0001038"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein modification during vegetative growth","termid":"FYPO:0000547"},{"relation_name":"is_a","term_name":"abnormal protein phosphorylation during vegetative growth","termid":"FYPO:0000775"},{"relation_name":"is_a","term_name":"increased protein phosphorylation","termid":"FYPO:0002680"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01787":null,"SJAG_04551":null},"genotype_count":1,"genotypes_by_uniquename":{"pck1delta":{"display_name":"pck1delta","display_uniquename":"pck1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01787:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased protein phosphorylation during vegetative growth","references_by_uniquename":{"PMID:34198697":null},"single_locus_annotated_genes":["SJAG_01787"],"single_locus_genotype_uniquenames":["pck1delta"],"synonyms":[{"name":"increased protein phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001038","terms_by_termid":{"FYPO:0001038":null}}


id: MONDO:0020051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete total autosomal trisomy (obsolete MONDO:0020051)","secondary_identifiers":["Orphanet:98131"],"termid":"MONDO:0020051","xrefs":{"Monarch":{"xref_id":"0020051"}}}


id: PBO:0046826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 4","termid":"PBO:0046826"}


id: FYPO:0006954
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-isoleucine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular isoleucine level","synonyms":[{"name":"increased cellular L-isoleucine level","type":"exact"},{"name":"increased cellular isoleucine level during mitotic cell cycle","type":"related"},{"name":"increased cellular isoleucine level during vegetative growth","type":"exact"},{"name":"increased isoleucine accumulation","type":"related"}],"termid":"FYPO:0006954"}


id: SO:0000937
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000937 vertebrate_immune_system_feature (obsolete SO:0000937)","termid":"SO:0000937"}


id: GO:1990505
data:
  {"annotated_genes":["SJAG_01374","SJAG_03300","SJAG_01076","SJAG_06022","SJAG_02214","SJAG_04272","SJAG_01677","SJAG_00573","SJAG_01410","SJAG_03843","SJAG_01221","SJAG_03898","SJAG_02079","SJAG_03780","SJAG_02822","SJAG_02439","SJAG_02992","SJAG_02198","SJAG_01832","SJAG_01584"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111166,113813],"is_not":false,"summary":null,"term":"GO:1990505"},{"annotations":[109764,91177,65348,118865,114575,111600,98192,97083,109788,98026,96843,92958,100254,100963,111122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990426"},{"annotations":[108160,91007,118477],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120292"}]},"cv_name":"biological_process","definition":"Any maintenance of fidelity that is involved in mitotic cell cycle DNA replication.","definition_xrefs":["PMID:19185548"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication maintenance of fidelity","termid":"GO:1902298"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic DNA replication","termid":"GO:1902969"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_01076":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02214":null,"SJAG_02439":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03300":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04272":null,"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"mitotic DNA replication maintenance of fidelity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:1990510"],"synonyms":[{"name":"maintenance of fidelity involved in mitotic DNA replication","type":"exact"},{"name":"maintenance of fidelity involved in mitotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1990505","terms_by_termid":{"GO:0120292":null,"GO:1990426":null,"GO:1990505":null}}


id: PBO:0074683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63E","termid":"PBO:0074683"}


id: MONDO:0002438
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of polycythemia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycythemia","termid":"MONDO:0005571"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acquired polycythemia","secondary_identifiers":["DOID:2834","ICD9:289.0","NCIT:C27178"],"synonyms":[{"name":"acquired polycythemia","type":"exact"},{"name":"acquired polycythemia (disease)","type":"exact"}],"termid":"MONDO:0002438","xrefs":{"Monarch":{"xref_id":"0002438"}}}


id: PBO:0048841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceronephosphate O-acyltransferase","termid":"PBO:0048841"}


id: GO:0070243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the occurrence or rate of thymocyte death by apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell apoptotic process","termid":"GO:0070232"},{"relation_name":"regulates","term_name":"thymocyte apoptotic process","termid":"GO:0070242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thymocyte apoptotic process","synonyms":[{"name":"regulation of immature T cell apoptosis","type":"related"},{"name":"regulation of thymocyte apoptosis","type":"narrow"}],"termid":"GO:0070243"}


id: PBO:0071940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 17","termid":"PBO:0071940"}


id: PBO:0069552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 823, pseudogene","termid":"PBO:0069552"}


id: PBO:0073987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 1","termid":"PBO:0073987"}


id: PBO:0066888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 188","termid":"PBO:0066888"}


id: GO:0016774
data:
  {"annotated_genes":["SJAG_00881","SJAG_03457","SJAG_00636","SJAG_03660"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003991"},{"annotations":[75555],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004072"},{"annotations":[71998],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004349"},{"annotations":[71917],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004618"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a phosphorus-containing group from one compound (donor) to a carboxyl group (acceptor).","definition_xrefs":["EC:2.7.2.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring phosphorus-containing groups","termid":"GO:0016772"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00636":null,"SJAG_00881":null,"SJAG_03457":null,"SJAG_03660":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphotransferase activity, carboxyl group as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0016774","terms_by_termid":{"GO:0003991":null,"GO:0004072":null,"GO:0004349":null,"GO:0004618":null}}


id: MONDO:0015453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cogan syndrome (CS) is a rare autoimmune disorder of unknown origin characterized by inflammatory ocular disease (mainly interstitial keratitis) and vestibulo-auditory manifestations (mainly acute onset hearing loss, tinnitus and vertigo), in the setting of a negative work-up for syphilis, with a variable risk of developing into a systemic disease. Systemic manifestations may occur in more than 70% of cases.","definition_xrefs":["Orphanet:1467"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease of ear, nose and throat","termid":"MONDO:0000587"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005046"],"is_obsolete":false,"name":"Cogan syndrome","secondary_identifiers":["GARD:1421","DOID:0060216","MESH:D055952","MedDRA:10056667","MEDGEN:82871","SCTID:405810005","UMLS:C0271270","icd11.foundation:2098089327"],"synonyms":[{"name":"Cogan syndrome","type":"exact"},{"name":"Cogan's syndrome","type":"exact"},{"name":"diffuse interstitual keratitis","type":"exact"}],"termid":"MONDO:0015453","xrefs":{"Monarch":{"xref_id":"0015453"}}}


