# terms

id: FYPO:0001782
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the nucleus is constricted in the middle, resembling a figure 8.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear morphology during vegetative growth","termid":"FYPO:0000062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0002403","FYPO:0000002"],"is_obsolete":false,"name":"constricted nucleus","synonyms":[{"name":"constricted nuclei","type":"exact"},{"name":"constricted nucleus during mitotic cell cycle","type":"related"},{"name":"constricted nucleus during vegetative growth","type":"exact"}],"termid":"FYPO:0001782"}


id: MONDO:0009300
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Perrault syndrome in which the cause of the disease is a mutation in the HSD17B4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Perrault syndrome","termid":"MONDO:0017312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004069","MONDO:0005047","MONDO:0005066"],"is_obsolete":false,"name":"Perrault syndrome 1","secondary_identifiers":["UMLS:C4551721","OMIM:233400","MEDGEN:1640257","Orphanet:642945"],"synonyms":[{"name":"HSD17B4 Perrault syndrome","type":"exact"},{"name":"PRLTS1","type":"related"},{"name":"Perrault syndrome 1","type":"exact"},{"name":"Perrault syndrome caused by mutation in HSD17B4","type":"exact"},{"name":"Perrault syndrome type 1","type":"exact"},{"name":"gonadal dysgenesis, 20 type, with deafness","type":"related"},{"name":"ovarian dysgenesis with sensorineural deafness","type":"related"}],"termid":"MONDO:0009300","xrefs":{"Monarch":{"xref_id":"0009300"}}}


id: GO:0009047
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global hyperactivation of all, or most of, the genes on the X-chromosome in the heterogametic sex, leading to a two-fold increase in gene expression from this chromosome. An example of this is found in Drosophila melanogaster.","definition_xrefs":["PMID:1568251","PMID:11498577","GOC:mr","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex-chromosome dosage compensation","termid":"GO:0007549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006325","GO:0008150"],"is_obsolete":false,"name":"dosage compensation by hyperactivation of X chromosome","secondary_identifiers":["Wikipedia:XY_sex-determination_system"],"termid":"GO:0009047"}


id: MONDO:0045036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A characteristic of an infectious disease in which the disease affects an immunologically normal host.","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease characteristic","termid":"MONDO:0045034"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary infectious","termid":"MONDO:0045036","xrefs":{"Monarch":{"xref_id":"0045036"}}}


id: PBO:0120171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exosome non-catalytic core component; involved in 3'-5' RNA processing and degradation in both the nucleus and the cytoplasm; protein abundance increases in response to DNA replication stress; has similarity to E. coli RNase PH; human ortholog hRrp45p (PM/SCL-75, EXOSC9) complements the yeast null mutant; mutations in hRrp45p are implicated in pontocerebellar hypoplasia type 1D","termid":"PBO:0120171"}


id: MONDO:0017529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polysyndactyly 4","termid":"MONDO:0008272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"polysyndactyly, unilateral","secondary_identifiers":["Orphanet:295159","icd11.foundation:127802550"],"synonyms":[{"name":"preaxial polydactyly type 4, unilateral","type":"exact"}],"termid":"MONDO:0017529","xrefs":{"Monarch":{"xref_id":"0017529"}}}


id: PBO:0044941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate synthase subunit","termid":"PBO:0044941"}


id: GO:0060682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the primary ureteric bud grows along its axis dorsally toward the metanephric blastema.","definition_xrefs":["PMID:16916378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"ureteric bud elongation","termid":"GO:0060677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary ureteric bud growth","termid":"GO:0060682"}


id: PBO:0083876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box receptor protein; subunit of the Skp1-Cdc53-F-box receptor (SCF) E3 ubiquitin ligase complex; binds to phosphorylated Ho endonuclease, allowing its ubiquitination by SCF and subsequent degradation","termid":"PBO:0083876"}


id: GO:0016512
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the formation of endothelin 1 by cleavage of the Trp21-Val22 bond in the precursor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete endothelin-converting enzyme 1 activity (obsolete GO:0016512)","synonyms":[{"name":"ECE-1 activity","type":"related"},{"name":"endothelin-converting enzyme 1 activity","type":"exact"}],"termid":"GO:0016512"}


id: GO:0080035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of progoitrin, a 2-hydroxy-but-3-enyl glucosinolate. Glucosinolates are substituted thioglucosides found in rapeseed products and related cruciferae, and progoitrin has been implicated in causing goiters in mammals and bitter taste in cruciferous vegetables.","definition_xrefs":["PMID:11560911","PMID:18945935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosinolate biosynthetic process","termid":"GO:0019761"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"2-hydroxy-but-3-enyl glucosinolate biosynthetic process","synonyms":[{"name":"2-hydroxy-but-3-enyl glucosinolate anabolism","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate biosynthesis","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate formation","type":"exact"},{"name":"2-hydroxy-but-3-enyl glucosinolate synthesis","type":"exact"},{"name":"progoitrin biosynthesis","type":"exact"},{"name":"progoitrin biosynthetic process","type":"exact"},{"name":"progoitrin synthesis","type":"exact"}],"termid":"GO:0080035"}


id: MONDO:0014507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Catel-Manzke syndrome is a rare bone disease characterized by bilateral hyperphalangy and clinodactyly of the index finger typically in association with Pierre Robin sequence comprising micrognathia, cleft palate and glossoptosis.","definition_xrefs":["Orphanet:1388"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catel-Manzke syndrome","secondary_identifiers":["NORD:901","OMIM:302380","GARD:28","MESH:C535347","OMIM:616145","SCTID:722383001","UMLS:C1844887","icd11.foundation:1023183031","MEDGEN:375536","DOID:0081122"],"synonyms":[{"name":"CATMANS","type":"related"},{"name":"Catel Manzke Syndrome","type":"exact"},{"name":"Catel Manzke syndrome","type":"related"},{"name":"Catel-Manzke syndrome","type":"exact"},{"name":"Palatodigital syndrome Catel-Manzke type","type":"related"},{"name":"Palatodigital syndrome, Catel-Manzke type","type":"exact"},{"name":"Pierre Robin sequence-hyperphalangy-clinodactyly syndrome","type":"exact"},{"name":"Pierre Robin syndrome with hyperphalangy and clinodactyly","type":"related"},{"name":"Pierre Robin syndrome-hyperphalangy-clinodactyly syndrome","type":"exact"},{"name":"hyperphalangy-clinodactyly of index finger with Pierre Robin syndrome","type":"exact"},{"name":"index finger anomaly with Pierre Robin syndrome","type":"related"},{"name":"index finger anomaly-Pierre Robin syndrome","type":"exact"},{"name":"micrognathia digital syndrome","type":"exact"}],"termid":"MONDO:0014507","xrefs":{"Monarch":{"xref_id":"0014507"}}}


id: PBO:0055337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2765","termid":"PBO:0055337"}


id: PR:000085722
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651, 2-136, Lys-37, MOD:00083.","definition_xrefs":["PMID:37459529","PRO:DAN","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht3/Me3(K36)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"PRO_0000221367, Lys-37, MOD:00083","type":"narrow"},{"name":"PomBase_original_PRO_term_name: histone H3.3, initiator methionine removed K36-trimethylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht3/InitMet-/K36Me3","type":"exact"},{"name":"UniProtKB:P10651, 2-136, Lys-37, MOD:00083","type":"narrow"},{"name":"hht3/Me3(K36)","type":"exact"}],"termid":"PR:000085722"}


id: GO:1900648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of chanoclavine-I aldehyde biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900646"},{"relation_name":"is_a","term_name":"positive regulation of ergot alkaloid biosynthetic process","termid":"GO:1900824"},{"relation_name":"positively_regulates","term_name":"chanoclavine-I aldehyde biosynthetic process","termid":"GO:1900569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of chanoclavine-I aldehyde biosynthetic process","synonyms":[{"name":"activation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"activation of chanoclavine-I aldehyde biosynthetic process","type":"narrow"},{"name":"activation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"activation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"positive regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"up-regulation of chanoclavine-I aldehyde synthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde anabolism","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthesis","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde biosynthetic process","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde formation","type":"exact"},{"name":"upregulation of chanoclavine-I aldehyde synthesis","type":"exact"}],"termid":"GO:1900648"}


id: PBO:0004710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin Kip2 subfamily","termid":"PBO:0004710"}


id: FYPO:0000372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of RNA modification is decreased. All RNA modification may be decreased, or one or more specific RNA modifications may be selectively affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA modification","termid":"FYPO:0000370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000294","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA modification","synonyms":[{"name":"RNA modification: decreased","type":"related"},{"name":"decreased RNA modification during mitotic cell cycle","type":"related"},{"name":"decreased RNA modification during vegetative growth","type":"exact"},{"name":"reduced RNA modification","type":"exact"}],"termid":"FYPO:0000372"}


id: PR:Q9UTM4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit epsilon that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit epsilon (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1420.02c","secondary_identifiers":["UniProtKB:Q9UTM4"],"synonyms":[{"name":"CCT-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT5","type":"exact"},{"name":"TCP-1-epsilon (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTM4"}


id: PBO:0075961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STARD3 N-terminal like","termid":"PBO:0075961"}


id: PR:O14040
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DIS3-like exonuclease 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIS3-like exonuclease 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2C4.07c","secondary_identifiers":["UniProtKB:O14040"],"synonyms":[{"name":"Spom972h-DIS3L2","type":"exact"}],"termid":"PR:O14040"}


id: MONDO:0002710
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An uncommon lipoma characterized by prominent vascularity that invades the surrounding deep tissue.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infiltrating lipoma","termid":"MONDO:0004075"},{"relation_name":"is_a","term_name":"angiolipoma","termid":"MONDO:0006085"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infiltrating angiolipoma","secondary_identifiers":["MEDGEN:227009","UMLS:C1305256","NCIT:C7449","DOID:3615"],"synonyms":[{"name":"angiolipoma, infiltrating","type":"exact"},{"name":"angiolipoma, infiltrating (morphologic abnormality)","type":"exact"},{"name":"infiltrating angiolipoma","type":"exact"}],"termid":"MONDO:0002710","xrefs":{"Monarch":{"xref_id":"0002710"}}}


id: MONDO:1011048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephrotic syndrome that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome, non-human animal","termid":"MONDO:1010261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrotic syndrome, domestic cat","secondary_identifiers":["OMIA:000712-9685"],"termid":"MONDO:1011048","xrefs":{"Monarch":{"xref_id":"1011048"}}}


id: PBO:0070692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L8 pseudogene 1","termid":"PBO:0070692"}


id: GO:0045925
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the receptiveness of a female to male advances.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of female receptivity","termid":"GO:0045924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of female receptivity","synonyms":[{"name":"activation of female receptivity","type":"narrow"},{"name":"stimulation of female receptivity","type":"narrow"},{"name":"up regulation of female receptivity","type":"exact"},{"name":"up-regulation of female receptivity","type":"exact"},{"name":"upregulation of female receptivity","type":"exact"}],"termid":"GO:0045925"}


id: PBO:0066030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase activating protein 1","termid":"PBO:0066030"}


id: GO:0046906
data:
  {"annotated_genes":["SJAG_MIT04","SJAG_02982","SJAG_02398","SJAG_03929","SJAG_02646","SJAG_MIT03","SJAG_02744","SJAG_05027","SJAG_03249","SJAG_02794","SJAG_03750","SJAG_04823","SJAG_04217"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78761,62550,66241,80183,69418,59634,57843,61386,121141,72361,121116,79976,72965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0020037"}]},"cv_name":"molecular_function","definition":"Binding to a tetrapyrrole, a compound containing four pyrrole nuclei variously substituted and linked to each other through carbons at the alpha position.","definition_xrefs":["ISBN:0198506732","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":13,"genes_by_uniquename":{"SJAG_02398":null,"SJAG_02646":null,"SJAG_02744":null,"SJAG_02794":null,"SJAG_02982":null,"SJAG_03249":null,"SJAG_03750":null,"SJAG_03929":null,"SJAG_04217":null,"SJAG_04823":null,"SJAG_05027":null,"SJAG_MIT03":null,"SJAG_MIT04":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"tetrapyrrole binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"porphyrin binding","type":"narrow"}],"termid":"GO:0046906","terms_by_termid":{"GO:0020037":null}}


id: PBO:0005021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threo-3-hydroxyaspartate ammonia-lyase (predicted)","termid":"PBO:0005021"}


id: GO:0050135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + H2O = ADP-D-ribose 2'-phosphate + nicotinamide + H+.","definition_xrefs":["RHEA:19849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"NADP+ nucleosidase activity","synonyms":[{"name":"NAD(P)+ nucleosidase activity","type":"broad"},{"name":"NADP nucleosidase activity","type":"exact"},{"name":"NADP(+) nucleosidase activity","type":"exact"},{"name":"NADP+ glycohydrolase activity","type":"related"},{"name":"NADPase activity","type":"related"}],"termid":"GO:0050135"}


id: GO:0051953
data:
  {"annotated_genes":["SJAG_03970"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of amines into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of amine transport","termid":"GO:0051952"},{"relation_name":"negatively_regulates","term_name":"amine transport","termid":"GO:0015837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03970":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of amine transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of amine transport","type":"exact"},{"name":"down-regulation of amine transport","type":"exact"},{"name":"downregulation of amine transport","type":"exact"},{"name":"inhibition of amine transport","type":"narrow"}],"termid":"GO:0051953","terms_by_termid":{"GO:1905533":null}}


id: GO:1901267
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of cephalosporin C.","definition_xrefs":["UniPathway:UPA00172","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic catabolic process","termid":"GO:0030655"},{"relation_name":"is_a","term_name":"sulfur compound catabolic process","termid":"GO:0044273"},{"relation_name":"is_a","term_name":"carboxylic acid catabolic process","termid":"GO:0046395"},{"relation_name":"is_a","term_name":"cephalosporin C metabolic process","termid":"GO:1901266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cephalosporin C catabolic process","synonyms":[{"name":"cephalosporin C breakdown","type":"exact"},{"name":"cephalosporin C catabolism","type":"exact"},{"name":"cephalosporin C degradation","type":"exact"}],"termid":"GO:1901267"}


id: GO:1905302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macropinocytosis.","definition_xrefs":["PMID:18691641","GOC:pad","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of pinocytosis","termid":"GO:0048550"},{"relation_name":"is_a","term_name":"regulation of macropinocytosis","termid":"GO:1905301"},{"relation_name":"negatively_regulates","term_name":"macropinocytosis","termid":"GO:0044351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"negative regulation of macropinocytosis","synonyms":[{"name":"down regulation of macropinocytosis","type":"exact"},{"name":"down-regulation of macropinocytosis","type":"exact"},{"name":"downregulation of macropinocytosis","type":"exact"},{"name":"inhibition of macropinocytosis","type":"narrow"}],"termid":"GO:1905302"}


id: GO:0018998
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete metaxin (obsolete GO:0018998)","synonyms":[{"name":"metaxin","type":"exact"}],"termid":"GO:0018998"}


id: MONDO:0044906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the bladder that involves the transitional epithelium projecting above the surrounding epithelial surface and consisting of villous or arborescent outgrowths of fibrovascular stroma.","definition_xrefs":["NCIT:C39858"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder benign neoplasm","termid":"MONDO:0000384"},{"relation_name":"is_a","term_name":"non-invasive bladder papillary urothelial neoplasm","termid":"MONDO:0003822"},{"relation_name":"is_a","term_name":"urothelial papilloma","termid":"MONDO:0004041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder urothelial papilloma","secondary_identifiers":["MEDGEN:237227","UMLS:C1384678"],"synonyms":[{"name":"bladder transitional cell papilloma","type":"exact"},{"name":"bladder urothelial papilloma","type":"exact"},{"name":"urinary bladder transitional cell papilloma","type":"exact"},{"name":"urinary bladder urothelial papilloma","type":"exact"}],"termid":"MONDO:0044906","xrefs":{"Monarch":{"xref_id":"0044906"}}}


id: FYPO:0001905
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the number, structure, and orientation of microtubules in the mitotic spindle are normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"},{"relation_name":"part_of","term_name":"normal mitotic spindle","termid":"FYPO:0001399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic spindle microtubules","synonyms":[{"name":"normal mitotic spindle microtubules during vegetative growth","type":"exact"},{"name":"normal spindle microtubules during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001905"}


id: PBO:0043754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 2","termid":"PBO:0043754"}


id: PBO:0077240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMCO1 antisense RNA 1","termid":"PBO:0077240"}


id: PR:O74482
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- coq11 gene.","definition_xrefs":["UniProtKB:O74482","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1840.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.09","synonyms":[{"name":"Spom972h-coq11","type":"exact"}],"termid":"PR:O74482"}


id: PBO:0043094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate sulfotransferase 6","termid":"PBO:0043094"}


id: PBO:0050249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 27","termid":"PBO:0050249"}


id: GO:0048841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of axon extension involved in axon guidance.","definition_xrefs":["GOC:devbiol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"regulates","term_name":"axon extension involved in axon guidance","termid":"GO:0048846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of axon extension involved in axon guidance","termid":"GO:0048841"}


id: GO:0089719
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an RHG (reaper/hid/grimm) domain/motif (AKA iap binding motif).","definition_xrefs":["GOC:dos","GOC:ha"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"RHG protein domain binding","synonyms":[{"name":"RHG domain binding","type":"exact"},{"name":"iap binding domain binding","type":"exact"},{"name":"inhibitor of apoptosis binding domain binding","type":"exact"},{"name":"reaper hid grim domain binding","type":"exact"}],"termid":"GO:0089719"}


id: MONDO:0021492
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the major salivary gland.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of major salivary gland","termid":"MONDO:0021368"},{"relation_name":"is_a","term_name":"benign neoplasm of salivary gland","termid":"MONDO:0021460"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of major salivary gland","secondary_identifiers":["NCIT:C4771","ICD9:210.2","SCTID:92205005","UMLS:C0496858","MEDGEN:96923"],"synonyms":[{"name":"benign Major salivary gland neoplasm","type":"exact"},{"name":"benign Major salivary gland tumor","type":"exact"},{"name":"benign Major salivary gland tumour","type":"exact"},{"name":"benign neoplasm of the Major salivary gland","type":"exact"},{"name":"benign tumor of Major salivary gland","type":"exact"},{"name":"benign tumor of the Major salivary gland","type":"exact"},{"name":"benign tumour of Major salivary gland","type":"exact"},{"name":"benign tumour of the Major salivary gland","type":"exact"},{"name":"major salivary gland benign neoplasm","type":"exact"}],"termid":"MONDO:0021492","xrefs":{"Monarch":{"xref_id":"0021492"}}}


id: MONDO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gangliosidosis GM1 (obsolete MONDO:0002609)","termid":"MONDO:0002609","xrefs":{"Monarch":{"xref_id":"0002609"}}}


id: GO:0060494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from a mesenchymal cell to an endodermal cell changing the fate of the endodermal cell.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inductive cell-cell signaling","termid":"GO:0031129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"inductive mesenchymal-endodermal cell signaling","synonyms":[{"name":"inductive mesenchymal-endodermal cell signalling","type":"exact"}],"termid":"GO:0060494"}


id: PBO:0044787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 1","termid":"PBO:0044787"}


id: GO:0110101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-valine into the vacuole across the vacuolar membrane.","definition_xrefs":["PMID:20944394","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutral amino acid transmembrane import into vacuole","termid":"GO:0034491"},{"relation_name":"is_a","term_name":"L-valine transmembrane transport","termid":"GO:1903785"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"L-valine transmembrane import into vacuole","termid":"GO:0110101"}


id: GO:0086048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which bundle of His cardiac muscle cell membrane potential changes in the depolarizing direction from the negative resting potential towards the positive membrane potential that will be the peak of the action potential.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane depolarization during cardiac muscle cell action potential","termid":"GO:0086012"},{"relation_name":"part_of","term_name":"bundle of His cell action potential","termid":"GO:0086043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"membrane depolarization during bundle of His cell action potential","synonyms":[{"name":"membrane depolarization during bundle of His cardiac muscle cell action potential","type":"exact"}],"termid":"GO:0086048"}


id: PBO:0064331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid scramblase 1","termid":"PBO:0064331"}


id: GO:0005597
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen trimer containing alpha(XVI) chains; type XVI trimers can associate with microfibrils.","definition_xrefs":["GOC:mah","PMID:12782140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FACIT collagen trimer","termid":"GO:0005593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type XVI trimer","termid":"GO:0005597"}


id: PBO:0066858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 158","termid":"PBO:0066858"}


id: PBO:0070377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"roundabout guidance receptor 3","termid":"PBO:0070377"}


id: GO:0045800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of chitin-based cuticular tanning.","definition_xrefs":["GOC:go_curators","GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chitin-based cuticle tanning","termid":"GO:0007564"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"chitin-based cuticle sclerotization","termid":"GO:0007593"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of chitin-based cuticle tanning","synonyms":[{"name":"down regulation of cuticle tanning","type":"exact"},{"name":"down-regulation of cuticle tanning","type":"exact"},{"name":"downregulation of cuticle tanning","type":"exact"},{"name":"inhibition of cuticle tanning","type":"narrow"},{"name":"negative regulation of cuticle hardening","type":"narrow"},{"name":"negative regulation of cuticle tanning","type":"exact"}],"termid":"GO:0045800"}


id: PBO:0074471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothelin","termid":"PBO:0074471"}


id: GO:0004787
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: thiamine diphosphate + H2O = thiamine monophosphate + phosphate.","definition_xrefs":["GOC:ai","RHEA:27998"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thiamine diphosphate phosphatase activity","synonyms":[{"name":"TPPase activity","type":"exact"},{"name":"thiamin pyrophosphatase activity","type":"exact"},{"name":"thiamin-pyrophosphatase activity","type":"exact"},{"name":"thiamine diphosphatase activity","type":"broad"},{"name":"thiamine pyrophosphatase activity","type":"exact"},{"name":"thiamine-diphosphatase activity","type":"exact"},{"name":"thiaminpyrophosphatase activity","type":"related"}],"termid":"GO:0004787"}


id: PBO:0080102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTP14A small subunit processome component","termid":"PBO:0080102"}


id: GO:0003911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + deoxyribonucleotide(n) + deoxyribonucleotide(m) = AMP + nicotinamide nucleotide + deoxyribonucleotide(n+m).","definition_xrefs":["EC:6.5.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA ligase activity","termid":"GO:0003909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"DNA ligase (NAD+) activity","secondary_identifiers":["MetaCyc:DNA-LIGASE-NAD+-RXN"],"synonyms":[{"name":"DNA joinase activity","type":"broad"},{"name":"DNA ligase (NAD)","type":"related"},{"name":"DNA repair enzyme activity","type":"related"},{"name":"DNA-joining enzyme","type":"related"},{"name":"deoxyribonucleate ligase","type":"broad"},{"name":"deoxyribonucleic acid joinase","type":"broad"},{"name":"deoxyribonucleic acid ligase","type":"broad"},{"name":"deoxyribonucleic joinase","type":"broad"},{"name":"deoxyribonucleic ligase","type":"broad"},{"name":"deoxyribonucleic repair enzyme","type":"related"},{"name":"deoxyribonucleic-joining enzyme","type":"related"},{"name":"poly(deoxyribonucleotide):poly(deoxyribonucleotide) ligase (AMP-forming, NMN-forming)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD(+)) activity","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD)","type":"related"},{"name":"polydeoxyribonucleotide synthase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase","type":"broad"},{"name":"polynucleotide ligase (NAD(+)) activity","type":"related"},{"name":"polynucleotide ligase (NAD)","type":"related"},{"name":"polynucleotide ligase (NAD+) activity","type":"related"},{"name":"polynucleotide ligase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase (nicotinamide adenine dinucleotide)","type":"related"},{"name":"polynucleotide synthetase activity","type":"related"}],"termid":"GO:0003911"}


id: GO:0019661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic enzymatic chemical reactions and pathways resulting in the breakdown of glucose to lactate, via canonical glycolysis, yielding energy in the form of adenosine triphosphate (ATP).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose catabolic process to lactate","termid":"GO:0019659"},{"relation_name":"is_a","term_name":"glycolytic fermentation","termid":"GO:0019660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0044281","GO:0006091","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"glucose catabolic process to lactate via pyruvate","secondary_identifiers":["MetaCyc:ANAEROFRUCAT-PWY"],"synonyms":[{"name":"glucose fermentation to lactate via pyruvate","type":"exact"},{"name":"homofermentation","type":"exact"},{"name":"homofermentative lactate fermentation","type":"exact"},{"name":"homofermentative pathway","type":"exact"},{"name":"homolactate fermentation","type":"exact"},{"name":"homolactic fermentation","type":"exact"}],"termid":"GO:0019661"}


id: PBO:0079886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uroplakin 3B like 3, pseudogene","termid":"PBO:0079886"}


id: GO:0010995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which free ubiquitin chains, compounds composed of a large number of ubiquitin monomers, are broken down.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein depolymerization","termid":"GO:0051261"},{"relation_name":"part_of","term_name":"ubiquitin recycling","termid":"GO:0010992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"free ubiquitin chain depolymerization","termid":"GO:0010995"}


id: PBO:0078116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 5","termid":"PBO:0078116"}


id: PR:O13980
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu29 gene.","definition_xrefs":["UniProtKB:O13980","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic expression up-regulated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.05","synonyms":[{"name":"Spom972h-meu29","type":"exact"}],"termid":"PR:O13980"}


id: GO:0022880
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + N-acetylglucosamine(out) = protein histidine + N-acetylglucosamine phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"},{"relation_name":"is_a","term_name":"N-acetylglucosamine transmembrane transporter activity","termid":"GO:0015572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-N-acetylglucosamine phosphotransferase system transporter activity","synonyms":[{"name":"N-acetylglucosamine PTS transporter activity","type":"exact"}],"termid":"GO:0022880"}


id: PBO:0113243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear peptidyl-prolyl cis-trans isomerase (PPIase); impacts expression of multiple genes via its role in nucleosome assembly; catalyzes isomerization of proline residues in histones H3 and H4, which affects lysine methylation of those histones; role in rDNA maintenance; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; contains a nucleoplasmin-like fold and can form pentamers","termid":"PBO:0113243"}


id: PR:O94632
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- egt1 gene.","definition_xrefs":["UniProtKB:O94632","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ergothioneine biosynthesis protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.01","synonyms":[{"name":"Spom972h-egt1","type":"exact"},{"name":"meiotically up-regulated gene 158 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94632"}


id: PBO:0064078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 112","termid":"PBO:0064078"}


id: GO:0070617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of thiamine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of vitamin metabolic process","termid":"GO:0046137"},{"relation_name":"is_a","term_name":"negative regulation of sulfur metabolic process","termid":"GO:0051175"},{"relation_name":"is_a","term_name":"regulation of thiamine diphosphate biosynthetic process","termid":"GO:0070616"},{"relation_name":"negatively_regulates","term_name":"thiamine diphosphate biosynthetic process","termid":"GO:0009229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006766"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0006790"},{"rel_name":"negatively_regulates","termid":"GO:0006766"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0008150","GO:0006766"],"is_obsolete":false,"name":"negative regulation of thiamine diphosphate biosynthetic process","synonyms":[{"name":"down regulation of thiamine diphosphate biosynthetic process","type":"exact"},{"name":"down-regulation of thiamine diphosphate biosynthetic process","type":"exact"},{"name":"downregulation of thiamine diphosphate biosynthetic process","type":"exact"},{"name":"inhibition of thiamine diphosphate biosynthetic process","type":"narrow"},{"name":"negative regulation of thiamin diphosphate biosynthetic process","type":"exact"},{"name":"negative regulation of thiamine diphosphate anabolism","type":"exact"},{"name":"negative regulation of thiamine diphosphate biosynthesis","type":"exact"},{"name":"negative regulation of thiamine diphosphate formation","type":"exact"},{"name":"negative regulation of thiamine diphosphate synthesis","type":"exact"}],"termid":"GO:0070617"}


id: MONDO:0045012
data:
  {"annotated_genes":["SJAG_02148","SJAG_04865","SJAG_04810","SJAG_03024","SJAG_03509","SJAG_02855","SJAG_01474","SJAG_00717","SJAG_04270","SJAG_03018","SJAG_02696"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[89256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013310"},{"annotations":[87545,87544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011503"},{"annotations":[88039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[88737,88736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[88601,88602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[87036,87037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[87763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[89227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"A disease that has its basis in the disruption of steroid metabolic process.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02148":null,"SJAG_02696":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04270":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"steroid metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:541265","UMLS:C0268283","SCTID:28710006"],"synonyms":[{"name":"disorder of steroid metabolic process","type":"exact"},{"name":"disorder of steroid metabolism","type":"exact"},{"name":"steroid metabolic process disease","type":"exact"},{"name":"steroid metabolism disease","type":"exact"}],"termid":"MONDO:0045012","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011503":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0013310":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0045012"}}}


id: PBO:0030796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_pole_body","termid":"PBO:0030796"}


id: MONDO:0100053
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute hypersensitivity reaction that occurs from exposure to an allergen. It results from the release of histamine and histamine-like substances from mast cells, and can present with breathing difficulty due to narrowed airways, dizziness and hypotension, skin rash, weak pulse, nausea and vomiting.","definition_xrefs":["NCIT:C107101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"anaphylaxis","secondary_identifiers":["UMLS:C4316895","MESH:D000707","MedDRA:10002198","MEDGEN:1373755","SCTID:39579001","icd11.foundation:1868068711"],"synonyms":[{"name":"anaphylactic shock","type":"exact"},{"name":"systemic anaphylaxis","type":"exact"}],"termid":"MONDO:0100053","xrefs":{"Monarch":{"xref_id":"0100053"}}}


id: GO:0034821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citronellol + NAD+ = citronellal + NADH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete citronellol dehydrogenase activity (obsolete GO:0034821)","termid":"GO:0034821"}


id: GO:1904646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a amyloid-beta stimulus.","definition_xrefs":["PMID:23555824","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to amyloid-beta","termid":"GO:1904645"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amyloid-beta","synonyms":[{"name":"cellular response to beta-amyloid","type":"exact"},{"name":"cellular response to beta-amyloids","type":"related"}],"termid":"GO:1904646"}


id: MONDO:0011378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete CFM1 (obsolete MONDO:0011378)","secondary_identifiers":["OMIM:603855"],"synonyms":[{"name":"CFM1","type":"exact"},{"name":"cystic fibrosis, modifier of, 1","type":"related"},{"name":"meconium ileus in cystic fibrosis, susceptibility to","type":"related"}],"termid":"MONDO:0011378","xrefs":{"Monarch":{"xref_id":"0011378"}}}


id: MONDO:0010939
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87324],"is_not":false,"summary":null,"term":"MONDO:0010939"}]},"cv_name":"mondo","definition":"Low phospholipid associated cholelithiasis is a rare genetic hepatic disease characterized by cholesterol gallstones and intrahepatic stones developing before the age of 40 years.","definition_xrefs":["Orphanet:69663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cholecystitis","termid":"MONDO:0002155"},{"relation_name":"is_a","term_name":"hereditary gallbladder disorder","termid":"MONDO:0700225"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"low phospholipid associated cholelithiasis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:715577009","OMIM:600803","UMLS:C2609268","MedDRA:10068936","icd11.foundation:1261516421","MEDGEN:760527","GARD:16683"],"synonyms":[{"name":"ABCB4 gene mutation-associated cholelithiasis","type":"exact"},{"name":"GBD1","type":"related"},{"name":"LPAC","type":"exact"},{"name":"cholelithiasis with ABCB4 gene mutation","type":"exact"},{"name":"cholelithiasis, Low phospholipid-associated","type":"related"},{"name":"gallbladder disease 1","type":"related"},{"name":"gallbladder disease type 1","type":"exact"}],"termid":"MONDO:0010939","terms_by_termid":{"MONDO:0010939":null},"xrefs":{"Monarch":{"xref_id":"0010939"}}}


id: PBO:0072563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAS2 pseudogene 1","termid":"PBO:0072563"}


id: PBO:0062232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily B member 12","termid":"PBO:0062232"}


id: PBO:0081474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 347","termid":"PBO:0081474"}


id: PBO:0050023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DP beta 1","termid":"PBO:0050023"}


id: PBO:0089865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide mononucleotide (NMN) adenylyltransferase","termid":"PBO:0089865"}


id: GO:1904238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a pericyte cell.","definition_xrefs":["GO_REF:0000086","PMID:23868830","GOC:dph","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pericyte cell differentiation","termid":"GO:1904238"}


id: GO:0071880
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adenylate cyclase-activating G protein-coupled receptor signaling pathway initiated by a ligand binding to an adrenergic receptor on the surface of the target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase-activating G protein-coupled receptor signaling pathway","termid":"GO:0007189"},{"relation_name":"is_a","term_name":"adrenergic receptor signaling pathway","termid":"GO:0071875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"adenylate cyclase-activating adrenergic receptor signaling pathway","synonyms":[{"name":"activation of adenylate cyclase activity by adrenergic receptor signaling pathway","type":"related"},{"name":"activation of adenylate cyclase activity by adrenergic receptor signalling pathway","type":"exact"},{"name":"adrenergic receptor, adenylate cyclase activating pathway","type":"exact"},{"name":"adrenergic receptor, adenylyl cyclase activating pathway","type":"exact"}],"termid":"GO:0071880"}


id: PBO:0078947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon TCG) 5-1","termid":"PBO:0078947"}


id: MONDO:0016328
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fatty acid oxidation and ketogenesis disorder with hypertrophic cardiomyopathy (obsolete MONDO:0016328)","secondary_identifiers":["Orphanet:217591"],"termid":"MONDO:0016328","xrefs":{"Monarch":{"xref_id":"0016328"}}}


id: GO:0047198
data:
  {"annotated_genes":["SJAG_01899"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90242],"is_not":false,"summary":null,"term":"GO:0047198"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-substituted L-cysteine + acetyl-CoA = S-substituted N-acetyl-L-cysteine + CoA + H+.","definition_xrefs":["RHEA:19213","EC:2.3.1.80"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01899":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"L-cysteine-S-conjugate N-acetyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-5433066","KEGG_REACTION:R04950","MetaCyc:2.3.1.80-RXN"],"synonyms":[{"name":"acetyl-CoA:S-substituted L-cysteine N-acetyltransferase activity","type":"related"},{"name":"cysteine-S-conjugate N-acetyltransferase activity","type":"exact"}],"termid":"GO:0047198","terms_by_termid":{"GO:0047198":null}}


id: GO:0000233
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A chromosome found in the cytoplasm during interphase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytoplasmic interphase chromosome (obsolete GO:0000233)","synonyms":[{"name":"cytoplasmic interphase chromosome","type":"exact"}],"termid":"GO:0000233"}


id: PBO:0041126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB domain containing 7 pseudogene 2","termid":"PBO:0041126"}


id: PR:O42668
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA polymerase-associated protein CTR9 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01880","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetratricopeptide repeat protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.14c","secondary_identifiers":["UniProtKB:O42668"],"synonyms":[{"name":"Spom972h-CTR9","type":"exact"}],"termid":"PR:O42668"}


id: PBO:0078964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 3-1","termid":"PBO:0078964"}


id: GO:0070259
data:
  {"annotated_genes":["SJAG_04418"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017005"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of phosphotyrosyl groups formed as covalent intermediates (in DNA backbone breakage) between a DNA topoisomerase and DNA.","definition_xrefs":["GOC:elh","PMID:16751265"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04418":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016788","GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyrosyl-DNA phosphodiesterase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070259","terms_by_termid":{"GO:0017005":null}}


id: FYPO:0003918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the degradation of messenger RNA (mRNA) molecules that contain nonsense mutations does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nonsense-mediated decay","termid":"FYPO:0003916"},{"relation_name":"is_a","term_name":"abolished nuclear mRNA catabolic process","termid":"FYPO:0003934"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished nonsense-mediated decay","synonyms":[{"name":"abolished NMD","type":"exact"},{"name":"abolished nonsense-mediated decay during mitotic cell cycle","type":"related"},{"name":"abolished nonsense-mediated decay during vegetative growth","type":"exact"},{"name":"abolished nuclear-transcribed mRNA catabolic process, nonsense-mediated decay","type":"exact"},{"name":"nonsense-mediated decay abolished","type":"exact"}],"termid":"FYPO:0003918"}


id: MONDO:0002320
data:
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id: PBO:0051007
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id: GO:0035176
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id: PBO:0071246
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id: PBO:0052190
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id: MONDO:0041366
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id: _global:results_in_determination_of
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id: PBO:0036054
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id: PBO:0050533
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id: GO:0051321
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id: PATO:0002151
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id: PBO:0031050
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id: PBO:0003221
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id: GO:0042313
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id: GO:0018774
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id: PBO:0014587
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id: PBO:0079410
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id: GO:0103082
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id: MONDO:0013196
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id: MONDO:0100421
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly GATA1 gene mutation. (A change in the nucleotide sequence of the GATA1 gene.)","definition_xrefs":["NCIT:C82340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"acute myeloid leukemia, GATA1 gene mutation","synonyms":[{"name":"AML, ERYF1 Gene Mutation","type":"exact"},{"name":"AML, GATA Binding Protein 1 Gene Mutation","type":"exact"},{"name":"AML, GATA-1 Gene Mutation","type":"exact"},{"name":"AML, GATA1 Mutation","type":"exact"},{"name":"AML, GATA1 gene mutation","type":"exact"},{"name":"AML, GF-1 Gene Mutation","type":"exact"},{"name":"AML, GF1 Gene Mutation","type":"exact"},{"name":"AML, NF-E1 Gene Mutation","type":"exact"},{"name":"AML, NFE1 Gene Mutation","type":"exact"}],"termid":"MONDO:0100421","xrefs":{"Monarch":{"xref_id":"0100421"}}}


id: GO:0047858
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dihydroxyfumarate + H+ = 2-hydroxy-3-oxopropanoate + CO2.","definition_xrefs":["RHEA:13845","EC:4.1.1.54"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"dihydroxyfumarate decarboxylase activity","secondary_identifiers":["MetaCyc:DIHYDROXYFUMARATE-DECARBOXYLASE-RXN","KEGG_REACTION:R03127"],"synonyms":[{"name":"dihydroxyfumarate carboxy-lyase (tartronate-semialdehyde-forming)","type":"related"},{"name":"dihydroxyfumarate carboxy-lyase activity","type":"related"}],"termid":"GO:0047858"}


id: GO:0052682
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id: PBO:0086471
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id: SO:0000207
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id: GO:0099567
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id: FYECO:0000464
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id: MONDO:0014582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital myasthenic syndrome characterized by autosomal recessive inheritance of postsynaptic neuromuscular junction defects, early-onset muscle weakness, and low amplitude of the miniature endplate potential and current that has material basis in ompound heterozygous mutation in the CHRNB1 gene on chromosome 17p13.","definition_xrefs":["PMID:25792100","DOID:0110680","PMID:10562302"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic congenital myasthenic syndrome","termid":"MONDO:0020344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital myasthenic syndrome 2C","secondary_identifiers":["MEDGEN:903254","OMIM:616314","GARD:16083","UMLS:C4225373"],"synonyms":[{"name":"CMS2C","type":"exact"},{"name":"congenital myasthenic syndrome 2C associated with acetylcholine receptor deficiency","type":"exact"},{"name":"congenital myasthenic syndrome type 2C","type":"exact"},{"name":"myasthenic syndrome, congenital, 2C, associated with acetylcholine receptor deficiency","type":"related"}],"termid":"MONDO:0014582","xrefs":{"Monarch":{"xref_id":"0014582"}}}


id: PBO:0046130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4H","termid":"PBO:0046130"}


id: GO:1905108
data:
  {"annotated_genes":["SJAG_04410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117753],"is_not":false,"summary":null,"term":"GO:1905108"}]},"cv_name":"molecular_function","definition":"Binding to guanosine.","definition_xrefs":["GO_REF:0000067","GOC:TermGenie","PMID:26007660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside binding","termid":"GO:0032550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"guanosine binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1905108","terms_by_termid":{"GO:1905108":null}}


id: PBO:0061127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuromedin B","termid":"PBO:0061127"}


id: MONDO:0007296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinocerebellar ataxia type 31 (SCA31) is a very rare subtype of autosomal dominant cerebellar ataxia type III (ADCA type III) characterized by the late-onset of cerebral ataxia, dysarthria and horizontal gaze nystagmus, and that is occasionally accompanied by pyramidal signs, tremor, decreased vibration sense and hearing difficulties.","definition_xrefs":["Orphanet:217012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type III","termid":"MONDO:0019793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0002039","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia type 31","secondary_identifiers":["SCTID:715826005","icd11.foundation:250956064","GARD:9975","MEDGEN:348439","UMLS:C1861736","OMIM:117210","DOID:0050980","MESH:C566146","NCIT:C176901","NANDO:1200044"],"synonyms":[{"name":"SCA31","type":"exact"},{"name":"spinocerebellar ataxia 16q22-linked","type":"related"},{"name":"spinocerebellar ataxia 31","type":"related"},{"name":"spinocerebellar ataxia type 31","type":"exact"},{"name":"spinocerebellar ataxia, 16Q22-linked","type":"related"}],"termid":"MONDO:0007296","xrefs":{"Monarch":{"xref_id":"0007296"}}}


id: MONDO:0006625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple symptoms associated with reduced oxygen at high altitude.","definition_xrefs":["MESH:D000532"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"cardiovascular disorder","termid":"MONDO:0004995"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"altitude sickness","secondary_identifiers":["icd11.foundation:987050905","Wikipedia:Altitude_sickness","UMLS:C0002351","MEDGEN:229","EFO:1000782"],"termid":"MONDO:0006625","xrefs":{"Monarch":{"xref_id":"0006625"}}}


id: PBO:0072391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 17","termid":"PBO:0072391"}


id: MONDO:0036976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm arising from the epithelial cells. It is characterized by the absence of morphologic features associated with malignancy (severe cytologic atypia, tumor cell necrosis, and high mitotic rate). Benign epithelial neoplasms remain confined to the original site of growth and only rarely metastasize to other anatomic sites.","definition_xrefs":["NCIT:C4092"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"epithelial neoplasm","termid":"MONDO:0005626"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign epithelial neoplasm","secondary_identifiers":["UMLS:C0334232","ICDO:8010/0","MEDGEN:90747","ICDO:8011/0"],"synonyms":[{"name":"benign epithelial neoplasm","type":"exact"},{"name":"benign epithelial tumor","type":"exact"},{"name":"benign epithelial tumour","type":"exact"},{"name":"benign epithelioma","type":"exact"},{"name":"benign neoplasm of epithelium","type":"exact"},{"name":"benign neoplasm of the epithelium","type":"exact"},{"name":"benign tumor of epithelium","type":"exact"},{"name":"benign tumor of the epithelium","type":"exact"},{"name":"benign tumour of epithelium","type":"exact"},{"name":"benign tumour of the epithelium","type":"exact"},{"name":"epithelial neoplasm, benign","type":"exact"},{"name":"epithelioma, benign","type":"exact"}],"termid":"MONDO:0036976","xrefs":{"Monarch":{"xref_id":"0036976"}}}


id: PBO:0059664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 30","termid":"PBO:0059664"}


id: GO:1901199
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any positive regulation of calcium ion transport into cytosol that is involved in cellular response to salt stress.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of calcium ion transport into cytosol","termid":"GO:0010524"},{"relation_name":"part_of","term_name":"cellular response to salt stress","termid":"GO:0071472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"positive regulation of calcium ion transport into cytosol involved in cellular response to salt stress","synonyms":[{"name":"positive regulation of calcium ion transport into cytosol involved in cellular response to ionic osmotic stress","type":"exact"},{"name":"positive regulation of calcium ion transport into cytosol involved in cellular salinity response","type":"exact"}],"termid":"GO:1901199"}


id: MONDO:0019595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 46,XY disorder of sex development due to adrenal and testicular steroidogenesis defect (obsolete MONDO:0019595)","secondary_identifiers":["Orphanet:90786"],"synonyms":[{"name":"46,XY DSD due to adrenal and testicular steroidogenesis defect","type":"exact"}],"termid":"MONDO:0019595","xrefs":{"Monarch":{"xref_id":"0019595"}}}


id: GO:1990721
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that is capable of dephosphorylation of alky, aryl and acyl orthophosphate monoesters and phosphorylated proteins. Optimal activity in acidic environment (pH 4-6). In mammals it consists of a homodimer of ACPP.","definition_xrefs":["PMID:12525165","GOC:bhm"],"gene_count":0,"genotype_count":0,"name":"obsolete prostatic acid phosphatase complex (obsolete GO:1990721)","synonyms":[{"name":"ACPP homodimer complex","type":"narrow"},{"name":"PAP complex","type":"exact"},{"name":"prostatic acid phosphatase complex","type":"exact"}],"termid":"GO:1990721"}


id: GO:0010040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an iron(II) ion stimulus.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to iron ion","termid":"GO:0010039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to iron(II) ion","synonyms":[{"name":"response to iron(II)","type":"exact"}],"termid":"GO:0010040"}


id: PBO:0063135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter of MAT2A antisense radiation-induced circulating long non-coding RNA","termid":"PBO:0063135"}


id: GO:1903045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neural crest cell migration that is involved in sympathetic nervous system development.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","GOC:rl","GOC:BHF","PMID:19325129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration involved in autonomic nervous system development","termid":"GO:1901166"},{"relation_name":"part_of","term_name":"sympathetic nervous system development","termid":"GO:0048485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell migration involved in sympathetic nervous system development","termid":"GO:1903045"}


id: MONDO:0011609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 5q31-q33.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","DOID:0110102","PMID:11069631"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 6","secondary_identifiers":["OMIM:605845","MESH:C565279","UMLS:C1853899","MEDGEN:344154"],"synonyms":[{"name":"ATOD6","type":"exact"},{"name":"atopic dermatitis 6","type":"exact"},{"name":"atopic dermatitis type 6","type":"exact"},{"name":"dermatitis, ATOPIC, 6","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0011609","xrefs":{"Monarch":{"xref_id":"0011609"}}}


id: PBO:0072682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUN and FYVE domain containing 3","termid":"PBO:0072682"}


id: MONDO:0020031
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare disease of cellular proliferation.","gene_count":0,"genotype_count":0,"name":"obsolete rare tumor (obsolete MONDO:0020031)","secondary_identifiers":["Orphanet:98057"],"synonyms":[{"name":"rare disease of cellular proliferation","type":"exact"},{"name":"rare neoplasm","type":"exact"},{"name":"rare neoplasm (disease)","type":"exact"}],"termid":"MONDO:0020031","xrefs":{"Monarch":{"xref_id":"0020031"}}}


id: PBO:0085889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; involved in nuclear processes of the Ran-GTPase cycle; involved in nuclear protein export; contains Ran Binding Domain and FxFG repeats; interacts with Srm1p, GTP-Gsp1p, Rna1p and Crm1p; relocalizes to the cytosol in response to hypoxia; not essential for viability","termid":"PBO:0085889"}


id: MONDO:0026188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic overgrowth/obesity syndrome (obsolete MONDO:0026188)","secondary_identifiers":["Orphanet:183573"],"termid":"MONDO:0026188","xrefs":{"Monarch":{"xref_id":"0026188"}}}


id: PBO:0069987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1282, pseudogene","termid":"PBO:0069987"}


id: GO:0050004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-glucose + isoflavone = UDP + isoflavone 7-O-beta-D-glucoside.","definition_xrefs":["MetaCyc:ISOFLAVONE-7-O-GLUCOSYLTRANSFERASE-RXN","EC:2.4.1.170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"isoflavone 7-O-glucosyltransferase activity","secondary_identifiers":["RHEA:56344"],"synonyms":[{"name":"UDP-glucose:isoflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose-flavonoid 7-O-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:isoflavone 7-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:isoflavone 7-O-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-isoflavone 7-O-glucosyltransferase activity","type":"related"}],"termid":"GO:0050004"}


id: MONDO:0011055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal monosomy 10p is a rare chromosomal disorder in which the tip of the short arm (p arm) of chromosome 10 is deleted resulting in a variable phenotype depending on the size of the deletion. The deletion may involve only the terminal 10p15 band, or extend towards the centromere to bands 10p14 or 10p13.","definition_xrefs":["Orphanet:1580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 10","termid":"MONDO:0016892"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal monosomy 10p","secondary_identifiers":["GARD:1323","MESH:C563337","SCTID:719686003","MEDGEN:321954","UMLS:C1832431"],"synonyms":[{"name":"10p deletion","type":"related"},{"name":"10p monosomy","type":"related"},{"name":"chromosome 10p deletion","type":"related"},{"name":"deletion 10p","type":"related"},{"name":"distal 10p deletion","type":"exact"},{"name":"distal monosomy type 10p","type":"exact"},{"name":"monosomy 10p","type":"related"},{"name":"monosomy 10pter","type":"exact"},{"name":"partial monosomy 10p","type":"related"},{"name":"telomeric deletion 10p","type":"exact"}],"termid":"MONDO:0011055","xrefs":{"Monarch":{"xref_id":"0011055"}}}


id: MONDO:0010296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"agammaglobulinemia","termid":"MONDO:0015977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 61","secondary_identifiers":["DOID:0111999","MESH:C538057","MEDGEN:337462","OMIM:300310","UMLS:C1845903","GARD:10007"],"synonyms":[{"name":"AGMX2","type":"exact"},{"name":"XLA2","type":"related"},{"name":"agammaglobulinemia X-linked type 2","type":"related"},{"name":"agammaglobulinemia, X-linked, type 2","type":"related"},{"name":"immunodeficiency 61, X-linked recessive","type":"exact"}],"termid":"MONDO:0010296","xrefs":{"Monarch":{"xref_id":"0010296"}}}


id: GO:0071312
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an alkaloid stimulus. Alkaloids are a large group of nitrogenous substances found in naturally in plants, many of which have extracts that are pharmacologically active.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkaloid","termid":"GO:0043279"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to alkaloid","termid":"GO:0071312"}


id: PBO:0116540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein Lcl3","termid":"PBO:0116540"}


id: GO:0000270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving peptidoglycans, any of a class of glycoconjugates found only in bacterial cell walls and consisting of long glycan strands of alternating residues of beta-(1,4) linked N-acetylglucosamine and N-acetylmuramic acid, cross-linked by short peptides.","definition_xrefs":["PMID:33139480"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosaminoglycan metabolic process","termid":"GO:0030203"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidoglycan metabolic process","secondary_identifiers":["GO:0009284"],"synonyms":[{"name":"murein metabolic process","type":"exact"},{"name":"murein metabolism","type":"exact"},{"name":"peptidoglycan metabolism","type":"exact"}],"termid":"GO:0000270"}


id: PBO:0110166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/U2 snRNA pseudouridine synthase Lsp1","termid":"PBO:0110166"}


id: PBO:0057207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 376a-2","termid":"PBO:0057207"}


id: FYPO:0001692
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to purvalanol A. Cells stop growing (and may die) at a concentration of purvalanol A that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0001985","FYPO:0000139","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to purvalanol A","synonyms":[{"name":"hypersensitive to purvalanol A","type":"exact"},{"name":"sensitive to purvalanol A during mitotic cell cycle","type":"related"},{"name":"sensitive to purvalanol A during vegetative growth","type":"exact"}],"termid":"FYPO:0001692"}


id: PBO:0077723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trinucleotide repeat containing adaptor 6A","termid":"PBO:0077723"}


id: MONDO:0008187
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial panic disorder","termid":"MONDO:0031240"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"panic disorder 1","secondary_identifiers":["MEDGEN:401493","OMIM:167870","UMLS:C1868649"],"synonyms":[{"name":"PAND1","type":"exact"},{"name":"panic disorder","type":"related"},{"name":"panic disorder 1","type":"exact"},{"name":"panic disorder susceptibility locus, chromosome 13Q-related","type":"related"},{"name":"panic disorder syndrome 1","type":"exact"},{"name":"panic disorder with Joint laxity","type":"related"},{"name":"panic disorder with bladder conditions","type":"related"},{"name":"panic disorder, susceptibility to","type":"exact"}],"termid":"MONDO:0008187","xrefs":{"Monarch":{"xref_id":"0008187"}}}


id: FYPO:0000894
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which intracellular mitochondrion distribution, the process that results in the spatial arrangement of mitochondria in a cell, is abnormal.","definition_xrefs":["PomBase:mah","GO:0048312"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial distribution","termid":"FYPO:0000489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"abnormal intracellular mitochondrion distribution","synonyms":[{"name":"abnormal intracellular mitochondrion distribution during mitotic cell cycle","type":"related"},{"name":"abnormal intracellular mitochondrion distribution during vegetative growth","type":"exact"}],"termid":"FYPO:0000894"}


id: MONDO:0004172
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A adenocarcinofibroma that involves the body of uterus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine body mixed cancer","termid":"MONDO:0002879"},{"relation_name":"is_a","term_name":"adenocarcinofibroma","termid":"MONDO:0002991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus adenocarcinofibroma","secondary_identifiers":["DOID:7281"],"synonyms":[{"name":"adenocarcinofibroma of body of uterus","type":"exact"},{"name":"body of uterus adenocarcinofibroma","type":"exact"}],"termid":"MONDO:0004172","xrefs":{"Monarch":{"xref_id":"0004172"}}}


id: GO:0047967
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycyrrhizate + H2O = 2-(beta-D-glucuronosyl)-D-glucuronate + glycyrrhetinate.","definition_xrefs":["RHEA:17369","EC:3.2.1.128"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"glycyrrhizinate beta-glucuronidase activity","secondary_identifiers":["KEGG_REACTION:R03906","MetaCyc:GLYCYRRHIZINATE-BETA-GLUCURONIDASE-RXN"],"synonyms":[{"name":"glycyrrhizin beta-hydrolase activity","type":"related"},{"name":"glycyrrhizin hydrolase activity","type":"related"},{"name":"glycyrrhizinate b-glucuronidase activity","type":"exact"},{"name":"glycyrrhizinate glucuronosylhydrolase activity","type":"related"},{"name":"glycyrrhizinic acid hydrolase activity","type":"related"}],"termid":"GO:0047967"}


id: MONDO:0018697
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 1","termid":"MONDO:0016883"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1p35.2 microdeletion syndrome","secondary_identifiers":["Orphanet:456298","MEDGEN:1807819","GARD:21898","UMLS:C5679992"],"synonyms":[{"name":"Del(1)(p35.2)","type":"exact"},{"name":"deletion 1p35.2","type":"exact"},{"name":"monosomy 1p35.2","type":"exact"}],"termid":"MONDO:0018697","xrefs":{"Monarch":{"xref_id":"0018697"}}}


id: PBO:0077109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 17A","termid":"PBO:0077109"}


id: PBO:0014304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial guanine nucleotide transporter Gcs1 (predicted)","termid":"PBO:0014304"}


id: MONDO:1012587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in American mink due to a mutation in the TYR gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, TYR-related, American mink","secondary_identifiers":["OMIA:000202-452646"],"synonyms":[{"name":"coat/skin colour, oculocutaneous albinism type I (OCA1), TYR-related in Neovison vison (American mink)","type":"exact"}],"termid":"MONDO:1012587","xrefs":{"Monarch":{"xref_id":"1012587"}}}


id: PR:O13978
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atg101 gene.","definition_xrefs":["UniProtKB:O13978","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 66 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC25H1.03","synonyms":[{"name":"Spom972h-atg101","type":"exact"},{"name":"autophagy-related protein 101 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13978"}


id: GO:1904222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of serine C-palmitoyltransferase activity.","definition_xrefs":["PMID:16120614","GOC:rl","GOC:BHF","GO_REF:0000059","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transferase activity","termid":"GO:0051347"},{"relation_name":"is_a","term_name":"regulation of serine C-palmitoyltransferase activity","termid":"GO:1904220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of serine C-palmitoyltransferase activity","synonyms":[{"name":"activation of 3-oxosphinganine synthetase activity","type":"narrow"},{"name":"activation of SPT","type":"related"},{"name":"activation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"activation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"narrow"},{"name":"activation of serine C-palmitoyltransferase activity","type":"narrow"},{"name":"positive regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"positive regulation of SPT","type":"related"},{"name":"positive regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"positive regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"up regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"up regulation of SPT","type":"related"},{"name":"up regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"up regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"up regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"up-regulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"up-regulation of SPT","type":"related"},{"name":"up-regulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"up-regulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"up-regulation of serine C-palmitoyltransferase activity","type":"exact"},{"name":"upregulation of 3-oxosphinganine synthetase activity","type":"exact"},{"name":"upregulation of SPT","type":"related"},{"name":"upregulation of acyl-CoA:serine C-2 acyltransferase decarboxylating","type":"related"},{"name":"upregulation of palmitoyl-CoA:L-serine C-palmitoyltransferase (decarboxylating) activity","type":"exact"},{"name":"upregulation of serine C-palmitoyltransferase activity","type":"exact"}],"termid":"GO:1904222"}


id: GO:0071916
data:
  {"annotated_genes":["SJAG_05182","SJAG_01983","SJAG_02139"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73839,120429,120430],"is_not":false,"summary":null,"term":"GO:0071916"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a dipeptide from one side of a membrane to the other. A dipeptide is a combination of two amino acids linked together by a peptide (-CO-NH-) bond.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01983":null,"SJAG_02139":null,"SJAG_05182":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"dipeptide transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0042936"],"synonyms":[{"name":"dipeptide transporter activity","type":"related"}],"termid":"GO:0071916","terms_by_termid":{"GO:0071916":null}}


id: PR:Q09870
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An RNA 3'-terminal phosphate cyclase-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00128","PANTHER:PTHR11096:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA 3'-terminal phosphate cyclase-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC12G12.06c","secondary_identifiers":["UniProtKB:Q09870"],"synonyms":[{"name":"Spom972h-RCL1","type":"exact"}],"termid":"PR:Q09870"}


id: GO:0051610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of serotonin into a cell, typically presynaptic neurons or glial cells. Serotonin (5-hydroxytryptamine) is a monoamine neurotransmitter occurring in the peripheral and central nervous systems.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin transport","termid":"GO:0006837"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"serotonin uptake","synonyms":[{"name":"5-HT uptake","type":"exact"},{"name":"5-hydroxytryptamine uptake","type":"exact"},{"name":"5HT uptake","type":"exact"},{"name":"serotonin import","type":"exact"}],"termid":"GO:0051610"}


id: GO:0061044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of blood vessel formation when new vessels emerge from the proliferation of pre-existing blood vessels and contribute to the series of events that restore integrity to damaged vasculature.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of angiogenesis","termid":"GO:0016525"},{"relation_name":"is_a","term_name":"regulation of vascular wound healing","termid":"GO:0061043"},{"relation_name":"is_a","term_name":"negative regulation of wound healing","termid":"GO:0061045"},{"relation_name":"negatively_regulates","term_name":"vascular wound healing","termid":"GO:0061042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vascular wound healing","termid":"GO:0061044"}


id: PBO:0039863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARHGAP26 antisense RNA 1","termid":"PBO:0039863"}


id: GO:1903000
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of lipid transport across blood-brain barrier.","definition_xrefs":["GOC:sjp","GOC:TermGenie","PMID:24345162","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid transport","termid":"GO:0032368"},{"relation_name":"is_a","term_name":"regulation of transport across blood-brain barrier","termid":"GO:0150200"},{"relation_name":"regulates","term_name":"lipid transport across blood-brain barrier","termid":"GO:1990379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of lipid transport across blood-brain barrier","synonyms":[{"name":"regulation of lipid transport across blood brain barrier","type":"exact"}],"termid":"GO:1903000"}


id: PBO:0091979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf20","termid":"PBO:0091979"}


id: GO:0031765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 galanin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"galanin receptor binding","termid":"GO:0031763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"type 2 galanin receptor binding","synonyms":[{"name":"type 2 galanin receptor ligand","type":"narrow"}],"termid":"GO:0031765"}


id: PBO:0069978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1273, pseudogene","termid":"PBO:0069978"}


id: PBO:0039810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor 4 pseudogene 1","termid":"PBO:0039810"}


id: MONDO:0859369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joint contractures, osteochondromas, and B-cell lymphoma","secondary_identifiers":["OMIM:620232","UMLS:C5774305","MEDGEN:1824078"],"termid":"MONDO:0859369","xrefs":{"Monarch":{"xref_id":"0859369"}}}


id: PATO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a single process inhering in a bearer by virtue of the state of bearer's mechanical, physical, and biochemical processes.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physiological state","termid":"PATO:0001912"}


id: GO:0030382
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of sperm mitochondria; the process in which they take on their characteristic morphology; they are flattened, elongated, and arranged circumferentially into a tight helical coil around the tail-dense fibers of the mature sperm.","definition_xrefs":["GOC:mah","GOC:dph","GOC:jl","PMID:8833144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0008150"],"is_obsolete":false,"name":"sperm mitochondrion organization","synonyms":[{"name":"sperm mitochondria organisation","type":"exact"},{"name":"sperm mitochondria organization and biogenesis","type":"related"},{"name":"sperm mitochondrion organization and biogenesis","type":"related"}],"termid":"GO:0030382"}


id: PBO:0048885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 4","termid":"PBO:0048885"}


id: PBO:0035879
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H4-K20_monomethylation_during_vegetative_growth","termid":"PBO:0035879"}


id: PBO:0043388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLYBL antisense RNA 2","termid":"PBO:0043388"}


id: GO:0008587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the imaginal disc-derived wing margin are generated and organized. The wing margin is a strip of cells in the third instar disc at the boundary between the presumptive dorsal and ventral surfaces of the wing blade.","definition_xrefs":["GOC:bf","GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic animal morphogenesis","termid":"GO:0009886"},{"relation_name":"part_of","term_name":"imaginal disc-derived wing morphogenesis","termid":"GO:0007476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing margin morphogenesis","synonyms":[{"name":"wing margin morphogenesis","type":"exact"}],"termid":"GO:0008587"}


id: GO:0009376
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses ATP-dependent protease activity; consists of an ATPase large subunit with homology to other ClpX family ATPases and a peptidase small subunit related to the proteasomal beta-subunits of eukaryotes. In the E. coli complex, a double ring-shaped homohexamer of HslV is capped on each side by a ring-shaped HslU homohexamer.","definition_xrefs":["PMID:12670962","UniProt:P0A6H5","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic proteasome complex","termid":"GO:0031597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"HslUV protease complex","synonyms":[{"name":"ClpYQ protease complex","type":"exact"}],"termid":"GO:0009376"}


id: PBO:0070897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 5","termid":"PBO:0070897"}


id: MONDO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"marginal corneal ulcer","secondary_identifiers":["DOID:10441","ICD9:370.01","UMLS:C0155067","SCTID:47398006","ICD10CM:H16.04","MEDGEN:509765","icd11.foundation:2035123281"],"termid":"MONDO:0001034","xrefs":{"Monarch":{"xref_id":"0001034"}}}


id: GO:0006535
data:
  {"annotated_genes":["SJAG_00582","SJAG_04305","SJAG_01880"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[61266,67929,78101],"is_not":false,"summary":null,"term":"GO:0006535"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cysteine from other compounds, including serine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-serine metabolic process","termid":"GO:0006563"},{"relation_name":"is_a","term_name":"cysteine biosynthetic process","termid":"GO:0019344"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00582":null,"SJAG_01880":null,"SJAG_04305":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"cysteine biosynthetic process from serine","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:CYSTSYN-PWY"],"synonyms":[{"name":"cysteine anabolism from serine","type":"exact"},{"name":"cysteine formation from serine","type":"exact"},{"name":"cysteine synthesis from serine","type":"exact"}],"termid":"GO:0006535","terms_by_termid":{"GO:0006535":null}}


id: GO:0141173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process by which a symbiont inhibits or disrupts pro-inflammatory cytokine signaling in the host organism, either by disruption of production, sequesteration, or destruction of at least one component of the signaling pathway. Pro-inflammatory cytokines include: IL-1, IL-12, IL-18, TNF, IFN-gamma, and GM-CSF. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20008527","PMID:24508400","PMID:32117813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host receptor-mediated signal transduction","termid":"GO:0075109"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host pro-inflammatory cytokine signaling","synonyms":[{"name":"negative regulation by symbiont of host pro-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host pro-inflammatory cytokine production","type":"exact"},{"name":"suppression by symbiont of host pro-inflammatory cytokine secretion","type":"related"},{"name":"symbiont-mediated degradation of host pro-inflammatory cytokine","type":"narrow"},{"name":"symbiont-mediated sequestering of host pro-inflammatory cytokine","type":"related"},{"name":"symbiont-mediated suppression of host pro-inflammatory cytokine production","type":"related"}],"termid":"GO:0141173"}


id: PBO:0056751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METTL5 pseudogene 2","termid":"PBO:0056751"}


id: MONDO:0001293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that affects the subglottic area of the larynx. The vast majority of cases are squamous cell carcinomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subglottis neoplasm","termid":"MONDO:0000933"},{"relation_name":"is_a","term_name":"larynx cancer","termid":"MONDO:0002352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"subglottis cancer","secondary_identifiers":["ICD10CM:C32.2","NCIT:C3546","SCTID:363430007","UMLS:C0153485","ICD9:161.2","MEDGEN:57562","DOID:11472"],"synonyms":[{"name":"Ca larynx - subglottis","type":"exact"},{"name":"cancer of subglottis","type":"exact"},{"name":"malignant neoplasm of subglottis","type":"exact"},{"name":"malignant neoplasm of the subglottis","type":"exact"},{"name":"malignant subglottic neoplasm","type":"exact"},{"name":"malignant subglottic tumor","type":"exact"},{"name":"malignant subglottic tumour","type":"exact"},{"name":"malignant subglottis neoplasm","type":"exact"},{"name":"malignant subglottis tumor","type":"exact"},{"name":"malignant subglottis tumour","type":"exact"},{"name":"malignant tumor of subglottis","type":"exact"},{"name":"malignant tumor of the subglottis","type":"exact"},{"name":"malignant tumour of subglottis","type":"exact"},{"name":"malignant tumour of the subglottis","type":"exact"},{"name":"subglottis cancer","type":"exact"}],"termid":"MONDO:0001293","xrefs":{"Monarch":{"xref_id":"0001293"}}}


id: GO:0062085
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of polysaccharides that make up the capsule, a protective structure surrounding some species of bacteria and fungi.","definition_xrefs":["PMID:21917918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of macromolecule biosynthetic process","termid":"GO:0010557"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062084"},{"relation_name":"is_a","term_name":"positive regulation of capsule organization","termid":"GO:1901915"},{"relation_name":"positively_regulates","term_name":"capsule polysaccharide biosynthetic process","termid":"GO:0045227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of capsule polysaccharide biosynthetic process","termid":"GO:0062085"}


id: MONDO:0016640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fibrous dysplasia of bone (obsolete MONDO:0016640)","termid":"MONDO:0016640","xrefs":{"Monarch":{"xref_id":"0016640"}}}


id: PBO:0085116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar peptidyl-prolyl cis-trans isomerase (PPIase); FK506 binding protein; affects expression of multiple genes via its role in nucleosome assembly; phosphorylated by casein kinase II (Cka1p-Cka2p-Ckb1p-Ckb2p) and dephosphorylated by Ptp1p; PPIase domain acts as a transcriptional repressor when tethered to DNA by lexA, and repressor activity is dependent on PPIase activity; FPR3 has a paralog, FPR4, that arose from the whole genome duplication","termid":"PBO:0085116"}


id: PBO:0064971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 27","termid":"PBO:0064971"}


id: PBO:0046481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 6, chromatin remodeling factor","termid":"PBO:0046481"}


id: PBO:0063166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAX3 and PAX7 binding protein 1","termid":"PBO:0063166"}


id: GO:0009802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ester derivatives of cinnamic acid, phenylpropenoic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenylpropanoid biosynthetic process","termid":"GO:0009699"},{"relation_name":"is_a","term_name":"cinnamic acid ester metabolic process","termid":"GO:0009801"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"},{"relation_name":"part_of","term_name":"cinnamic acid metabolic process","termid":"GO:0009803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"part_of","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"cinnamic acid ester biosynthetic process","synonyms":[{"name":"cinnamic acid ester anabolism","type":"exact"},{"name":"cinnamic acid ester biosynthesis","type":"exact"},{"name":"cinnamic acid ester formation","type":"exact"},{"name":"cinnamic acid ester synthesis","type":"exact"},{"name":"cinnamylic acid ester biosynthesis","type":"exact"},{"name":"cinnamylic acid ester biosynthetic process","type":"exact"},{"name":"phenylacrylic acid ester biosynthesis","type":"exact"},{"name":"phenylacrylic acid ester biosynthetic process","type":"exact"}],"termid":"GO:0009802"}


id: GO:0097086
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whereby a relatively unspecialized cell acquires specialized features of an amniotic stem cell. An amniotic stem cell is a mesenchymal stem cell extracted from amniotic fluid. Amniotic stem cells are able to differentiate into various tissue types such as skin, cartilage, cardiac tissue, nerves, muscle, and bone.","definition_xrefs":["GOC:yaf","PMID:20942606","CL:0002639","Wikipedia:Amniotic_stem_cells"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal stem cell differentiation","termid":"GO:0072497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"amniotic stem cell differentiation","termid":"GO:0097086"}


id: GO:0000155
data:
  {"annotated_genes":["SJAG_00331","SJAG_02183","SJAG_01587"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58460,67074,79822],"is_not":false,"summary":null,"term":"GO:0000155"}]},"cv_name":"molecular_function","definition":"Catalysis of the phosphorylation of a histidine residue in response to detection of an extracellular signal such as a chemical ligand or change in environment, to initiate a change in cell state or activity. The two-component sensor is a histidine kinase that autophosphorylates a histidine residue in its active site. The phosphate is then transferred to an aspartate residue in a downstream response regulator, to trigger a response.","definition_xrefs":["GOC:bf","GOC:mcc","PMID:10966457","PMID:20223701","PMID:31386843","PMID:9191038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein histidine kinase activity","termid":"GO:0004673"},{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00331":null,"SJAG_01587":null,"SJAG_02183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140299","GO:0004672","GO:0140096","GO:0003674","GO:0003824","GO:0016740","GO:0016301","GO:0098772"],"is_obsolete":false,"name":"phosphorelay sensor kinase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"two-component sensor activity","type":"narrow"},{"name":"two-component sensor molecule","type":"narrow"},{"name":"two-component system sensor activity","type":"narrow"}],"termid":"GO:0000155","terms_by_termid":{"GO:0000155":null}}


id: PBO:0071993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 22","termid":"PBO:0071993"}


id: PBO:0000121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrolase (predicted)","termid":"PBO:0000121"}


id: FYPO:0009103
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the recoil distance of the cytokynetic ring after ring ablation is increased with respect to wild type. Experimentally, a localised cut or ablation is typically achieved using a laser. This distance, in combination with the timing of recoil are used to compute effective stiffness and drag of the ring components. See PMID:36980258.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0000631","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased actomyosin contractile ring recoil distance after ring ablation","secondary_identifiers":["PMID:36980258"],"synonyms":[{"name":"increased cytokinetic ring recoil distance after laser ablation","type":"broad"}],"termid":"FYPO:0009103"}


id: GO:0032101
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a response to an external stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"response to external stimulus","termid":"GO:0009605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to external stimulus","termid":"GO:0032101"}


id: MONDO:0019223
data:
  {"annotated_genes":["SJAG_04499","SJAG_00413","SJAG_02769"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87949],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011614"},{"annotations":[89024],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008760"},{"annotations":[88531],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009492"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of energy metabolism","termid":"MONDO:0019243"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00413":null,"SJAG_02769":null,"SJAG_04499":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"disorder of fatty acid and ketone body metabolism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5681281","GARD:18954","MEDGEN:1842462","Orphanet:79174"],"synonyms":[{"name":"disorder of fatty acid oxidation and ketone body metabolism","type":"related"},{"name":"inborn disorder of fatty acid oxidation and ketone body metabolism","type":"exact"}],"termid":"MONDO:0019223","terms_by_termid":{"MONDO:0008760":null,"MONDO:0009492":null,"MONDO:0011614":null},"xrefs":{"Monarch":{"xref_id":"0019223"}}}


id: PBO:0048441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate binding protein 4","termid":"PBO:0048441"}


id: PBO:0029007
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_long_introns","termid":"PBO:0029007"}


id: PBO:0091879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER sterol deacetylase Say1","termid":"PBO:0091879"}


id: PBO:0051474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (IV)-64 (pseudogene)","termid":"PBO:0051474"}


id: PBO:0063376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphate cytidylyltransferase 2, ethanolamine","termid":"PBO:0063376"}


id: GO:0062186
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the epoxidation of double bonds of the arachidonoyl moiety of anandamide.","definition_xrefs":["PMID:21289075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"anandamide epoxidase activity","synonyms":[{"name":"arachidonoylethanolamide epoxidase activity","type":"exact"}],"termid":"GO:0062186"}


id: MONDO:0859085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with gait disturbance, dysmorphic facies, and behavioral abnormalities, X-linked","secondary_identifiers":["OMIM:301094","UMLS:C5774179","MEDGEN:1823953"],"termid":"MONDO:0859085","xrefs":{"Monarch":{"xref_id":"0859085"}}}


id: GO:0018294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FAD linkage via S-(8-alpha-FAD)-L-cysteine.","definition_xrefs":["RESID:AA0143"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FAD linkage via S-(8alpha-FAD)-L-cysteine (obsolete GO:0018294)","termid":"GO:0018294"}


id: PBO:0036266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECT-type ubiquitin-protein ligase E3 involved in ER-associated protein catabolic process (predicted)","termid":"PBO:0036266"}


id: PBO:0070001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1297, pseudogene","termid":"PBO:0070001"}


id: PBO:0072943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small Cajal body-specific RNA 22","termid":"PBO:0072943"}


id: PBO:0078778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (GTT) 3-2","termid":"PBO:0078778"}


id: MONDO:0018089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Double outlet right ventricle (DORV) is a rare cono-truncal anomaly in which both the aorta and pulmonary artery originate, either entirely or predominantly, from the morphologic right ventricle.","definition_xrefs":["Orphanet:3426"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect","termid":"MONDO:0002070"},{"relation_name":"is_a","term_name":"conotruncal heart malformations","termid":"MONDO:0016581"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"double outlet right ventricle","secondary_identifiers":["NANDO:2100076","SCTID:204299009","MEDGEN:41649","NCIT:C98916","icd11.foundation:141717788","MedDRA:10013611","MESH:D004310","ICD10CM:Q20.1","DOID:6406","GARD:1908","NANDO:2200256","NANDO:1200710","UMLS:C0013069"],"synonyms":[{"name":"DORV","type":"exact"},{"name":"Dextrotransposition of aorta","type":"exact"},{"name":"double outlet right ventricle","type":"exact"}],"termid":"MONDO:0018089","xrefs":{"Monarch":{"xref_id":"0018089"}}}


id: MONDO:0010488
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the KIF4A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 100","secondary_identifiers":["MEDGEN:855516","DOID:0112040","OMIM:300923","UMLS:C3890167"],"synonyms":[{"name":"KIF4A non-syndromic X-linked intellectual disability","type":"exact"},{"name":"MRX100","type":"related"},{"name":"intellectual developmental disorder, X-linked 100, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 100","type":"exact"},{"name":"intellectual disability, X-linked type 100","type":"exact"},{"name":"mental retardation, X-linked 100","type":"related"},{"name":"mental retardation, X-linked type 100","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in KIF4A","type":"exact"}],"termid":"MONDO:0010488","xrefs":{"Monarch":{"xref_id":"0010488"}}}


id: GO:0010335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus indicating an increase or decrease in the concentration of non-ionic solutes (e.g. mannitol, sorbitol) in the environment.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to osmotic stress","termid":"GO:0006970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to non-ionic osmotic stress","termid":"GO:0010335"}


id: GO:1903771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of beta-galactosidase activity.","definition_xrefs":["GO_REF:0000059","GOC:BHF","GOC:nc","PMID:11927518","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hydrolase activity","termid":"GO:0051345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of beta-galactosidase activity","synonyms":[{"name":"activation of S 2107","type":"related"},{"name":"activation of beta-D-galactanase activity","type":"narrow"},{"name":"activation of beta-D-galactoside galactohydrolase activity","type":"narrow"},{"name":"activation of beta-D-lactosidase activity","type":"narrow"},{"name":"activation of beta-galactosidase activity","type":"narrow"},{"name":"activation of beta-lactosidase activity","type":"narrow"},{"name":"activation of exo-(1->4)-beta-D-galactanase activity","type":"narrow"},{"name":"activation of hydrolact","type":"related"},{"name":"activation of lactose hydrolysis","type":"related"},{"name":"activation of lactozym","type":"related"},{"name":"activation of maxilact","type":"related"},{"name":"activation of oryzatym","type":"related"},{"name":"activation of sumiklat","type":"related"},{"name":"activation of trilactase activity","type":"narrow"},{"name":"positive regulation of S 2107","type":"related"},{"name":"positive regulation of beta-D-galactanase activity","type":"exact"},{"name":"positive regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"positive regulation of beta-D-lactosidase activity","type":"exact"},{"name":"positive regulation of beta-lactosidase activity","type":"exact"},{"name":"positive regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"positive regulation of hydrolact","type":"related"},{"name":"positive regulation of lactose hydrolysis","type":"related"},{"name":"positive regulation of lactozym","type":"related"},{"name":"positive regulation of maxilact","type":"related"},{"name":"positive regulation of oryzatym","type":"related"},{"name":"positive regulation of sumiklat","type":"related"},{"name":"positive regulation of trilactase activity","type":"exact"},{"name":"up regulation of S 2107","type":"related"},{"name":"up regulation of beta-D-galactanase activity","type":"exact"},{"name":"up regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"up regulation of beta-D-lactosidase activity","type":"exact"},{"name":"up regulation of beta-galactosidase activity","type":"exact"},{"name":"up regulation of beta-lactosidase activity","type":"exact"},{"name":"up regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"up regulation of hydrolact","type":"related"},{"name":"up regulation of lactose hydrolysis","type":"related"},{"name":"up regulation of lactozym","type":"related"},{"name":"up regulation of maxilact","type":"related"},{"name":"up regulation of oryzatym","type":"related"},{"name":"up regulation of sumiklat","type":"related"},{"name":"up regulation of trilactase activity","type":"exact"},{"name":"up-regulation of S 2107","type":"related"},{"name":"up-regulation of beta-D-galactanase activity","type":"exact"},{"name":"up-regulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"up-regulation of beta-D-lactosidase activity","type":"exact"},{"name":"up-regulation of beta-galactosidase activity","type":"exact"},{"name":"up-regulation of beta-lactosidase activity","type":"exact"},{"name":"up-regulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"up-regulation of hydrolact","type":"related"},{"name":"up-regulation of lactose hydrolysis","type":"related"},{"name":"up-regulation of lactozym","type":"related"},{"name":"up-regulation of maxilact","type":"related"},{"name":"up-regulation of oryzatym","type":"related"},{"name":"up-regulation of sumiklat","type":"related"},{"name":"up-regulation of trilactase activity","type":"exact"},{"name":"upregulation of S 2107","type":"related"},{"name":"upregulation of beta-D-galactanase activity","type":"exact"},{"name":"upregulation of beta-D-galactoside galactohydrolase activity","type":"exact"},{"name":"upregulation of beta-D-lactosidase activity","type":"exact"},{"name":"upregulation of beta-galactosidase activity","type":"exact"},{"name":"upregulation of beta-lactosidase activity","type":"exact"},{"name":"upregulation of exo-(1->4)-beta-D-galactanase activity","type":"exact"},{"name":"upregulation of hydrolact","type":"related"},{"name":"upregulation of lactose hydrolysis","type":"related"},{"name":"upregulation of lactozym","type":"related"},{"name":"upregulation of maxilact","type":"related"},{"name":"upregulation of oryzatym","type":"related"},{"name":"upregulation of sumiklat","type":"related"},{"name":"upregulation of trilactase activity","type":"exact"}],"termid":"GO:1903771"}


id: GO:0034463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and RNA molecules to form a 90S preribosome. The 90S preribosome represents the complex that forms on the primary rRNA transcript before it splits into the small subunit and large subunit portions.","definition_xrefs":["GOC:tb","GOC:mah","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"cytosolic ribosome assembly","termid":"GO:0042256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"90S preribosome assembly","termid":"GO:0034463"}


id: FYPO:0001000
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested normally in G1 phase when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cell cycle arrest in mitotic G1 phase in response to nitrogen starvation","termid":"FYPO:0000711"},{"relation_name":"is_a","term_name":"normally arrested mitotic cell cycle progression","termid":"FYPO:0001025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000257","FYPO:0000631","FYPO:0001985","FYPO:0001320","FYPO:0000298"],"is_obsolete":false,"name":"normal cell cycle arrest in mitotic G1 phase during nitrogen starvation","synonyms":[{"name":"mitotic G1 phase arrest during nitrogen starvation","type":"exact"},{"name":"normal cell cycle arrest in mitotic G1 phase during nitrogen depletion","type":"exact"},{"name":"normal cell cycle arrest in mitotic G1 phase during nitrogen deprivation","type":"exact"},{"name":"normal mitotic cell cycle arrest in G1 phase during nitrogen starvation","type":"exact"}],"termid":"FYPO:0001000"}


id: MOD:01505
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ4plex-116 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-116 reporter+balance reagent acylated residue","termid":"MOD:01499"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent O-acylated residue","termid":"MOD:01713"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ4plex-116 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"iTRAQ4plex","type":"related"}],"termid":"MOD:01505"}


id: MONDO:0016341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lysosomal disease with restrictive cardiomyopathy (obsolete MONDO:0016341)","secondary_identifiers":["Orphanet:217638"],"termid":"MONDO:0016341","xrefs":{"Monarch":{"xref_id":"0016341"}}}


id: FYPO:0003962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of phospholipid:diacylglycerol acyltransferase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal phospholipid:diacylglycerol acyltransferase activity","termid":"FYPO:0003961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"decreased phospholipid:diacylglycerol acyltransferase activity","synonyms":[{"name":"decreased PDAT activity","type":"exact"},{"name":"reduced phospholipid:diacylglycerol acyltransferase activity","type":"exact"}],"termid":"FYPO:0003962"}


id: SO:0001502
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An experimental feature with high sequence identity to another sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high_identity_region","synonyms":[{"name":"high identity region","type":"exact"}],"termid":"SO:0001502"}


id: MONDO:0012754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nanophthalmia","termid":"MONDO:0005514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"nanophthalmos 3","secondary_identifiers":["GARD:18627","UMLS:C2678467","MEDGEN:395628","OMIM:611897","MESH:C567498"],"synonyms":[{"name":"NNO3","type":"exact"},{"name":"Nanophthalmia 3","type":"related"},{"name":"nanophthalmos 3","type":"exact"}],"termid":"MONDO:0012754","xrefs":{"Monarch":{"xref_id":"0012754"}}}


id: PBO:0028278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-merotelic_kinetochore_attachment_during_mitosis","termid":"PBO:0028278"}


id: GO:0000150
data:
  {"annotated_genes":["SJAG_02267","SJAG_04530","SJAG_00757","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74268,77068,77739,104211],"is_not":false,"summary":null,"term":"GO:0000150"}]},"cv_name":"molecular_function","definition":"Catalysis of the identification and base-pairing of homologous sequences between single-stranded DNA and double-stranded DNA.","definition_xrefs":["GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_02267":null,"SJAG_04530":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DNA strand exchange activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-912458"],"synonyms":[{"name":"RecA-family recombinase activity","type":"related"},{"name":"recombinase activity","type":"exact"},{"name":"strand exchange activity","type":"related"},{"name":"strand transferase","type":"narrow"}],"termid":"GO:0000150","terms_by_termid":{"GO:0000150":null}}


id: RO:0002640
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A sub-relation of endoparasite-of in which the parasite inhabits host cells.","direct_ancestors":[{"relation_name":"is_a","term_name":"endoparasite_of","termid":"RO:0002634"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracellular_endoparasite_of","termid":"RO:0002640"}


id: MONDO:0013353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, anterior maxillary protrusion, and strabismus","secondary_identifiers":["Orphanet:562559","UMLS:C3150924","GARD:17997","MEDGEN:462274","OMIM:613671"],"synonyms":[{"name":"MRAMS","type":"related"},{"name":"intellectual disability, anterior maxillary protrusion, and strabismus","type":"exact"},{"name":"mental retardation, anterior maxillary protrusion, and strabismus","type":"related"}],"termid":"MONDO:0013353","xrefs":{"Monarch":{"xref_id":"0013353"}}}


id: GO:2000234
data:
  {"annotated_genes":["SJAG_04890","SJAG_01764"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77351,79979],"is_not":false,"summary":null,"term":"GO:2000234"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of rRNA processing.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA metabolic process","termid":"GO:0051254"},{"relation_name":"is_a","term_name":"regulation of rRNA processing","termid":"GO:2000232"},{"relation_name":"positively_regulates","term_name":"rRNA processing","termid":"GO:0006364"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01764":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of rRNA processing","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"positive regulation of 35S primary transcript processing","type":"related"}],"termid":"GO:2000234","terms_by_termid":{"GO:2000234":null}}


id: MONDO:0021607
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A seborrheic keratosis that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"seborrheic keratosis","termid":"MONDO:0008420"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005328"],"is_obsolete":false,"name":"eyelid seborrheic keratosis","secondary_identifiers":["UMLS:C0339109","MEDGEN:137912","NCIT:C4356","SCTID:231826004"],"synonyms":[{"name":"basal cell papilloma of eyelid","type":"exact"},{"name":"basal cell papilloma of the eyelid","type":"exact"},{"name":"eyelid basal cell papilloma","type":"exact"},{"name":"eyelid seborrheic keratosis","type":"exact"},{"name":"seborrheic keratosis of eyelid","type":"exact"},{"name":"seborrheic keratosis of the eyelid","type":"exact"}],"termid":"MONDO:0021607","xrefs":{"Monarch":{"xref_id":"0021607"}}}


id: SO:0000158
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cloning vector that utilizes the E. coli F factor.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fosmid","secondary_identifiers":["http://en.wikipedia.org/wiki/Fosmid"],"synonyms":[{"name":"fosmid vector","type":"related"}],"termid":"SO:0000158"}


id: GO:1900953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of 18-methylnonadec-1-ene metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"18-methylnonadec-1-ene metabolic process","termid":"GO:1900880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of 18-methylnonadec-1-ene metabolic process","synonyms":[{"name":"regulation of 18-methylnonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900953"}


id: GO:1903745
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nematode pharyngeal pumping.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:25329901","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nematode pharyngeal pumping","termid":"GO:0043051"},{"relation_name":"is_a","term_name":"negative regulation of eating behavior","termid":"GO:1903999"},{"relation_name":"negatively_regulates","term_name":"nematode pharyngeal pumping","termid":"GO:0043050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of nematode pharyngeal pumping","synonyms":[{"name":"down regulation of pharyngeal pumping","type":"exact"},{"name":"down regulation of pumping behavior","type":"related"},{"name":"down-regulation of pharyngeal pumping","type":"exact"},{"name":"down-regulation of pumping behavior","type":"related"},{"name":"downregulation of pharyngeal pumping","type":"exact"},{"name":"downregulation of pumping behavior","type":"related"},{"name":"inhibition of pharyngeal pumping","type":"narrow"},{"name":"inhibition of pumping behavior","type":"related"},{"name":"negative regulation of pumping behavior","type":"related"}],"termid":"GO:1903745"}


id: MONDO:0019760
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"amniotic band syndrome","termid":"MONDO:0015167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"terminal transverse defects of arm","secondary_identifiers":["MESH:C565681","MEDGEN:341800","UMLS:C1857578","Orphanet:93937"],"synonyms":[{"name":"congenital limb amputation","type":"exact"}],"termid":"MONDO:0019760","xrefs":{"Monarch":{"xref_id":"0019760"}}}


id: PBO:0076339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptotagmin 7","termid":"PBO:0076339"}


id: PR:O42872
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exosome complex component RRP41 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome complex component ski6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G9.10c","secondary_identifiers":["UniProtKB:O42872"],"synonyms":[{"name":"Spom972h-EXOSC4","type":"exact"},{"name":"ribosomal RNA-processing protein 41 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42872"}


id: MONDO:0004621
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the upper lip.","direct_ancestors":[{"relation_name":"is_a","term_name":"lip cancer","termid":"MONDO:0006834"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"upper lip cancer","secondary_identifiers":["DOID:8630","ICD9:140.3","ICD9:140.0"],"synonyms":[{"name":"cancer of upper lip","type":"exact"},{"name":"malignant neoplasm of upper lip","type":"exact"},{"name":"malignant upper lip neoplasm","type":"exact"},{"name":"upper lip cancer","type":"exact"}],"termid":"MONDO:0004621","xrefs":{"Monarch":{"xref_id":"0004621"}}}


id: PBO:0002740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Atg8 deconjugator Atg4 (predicted)","termid":"PBO:0002740"}


id: PBO:0045219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJC8 pseudogene 4","termid":"PBO:0045219"}


id: GO:0048587
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of short-day photoperiodism, where the response associated with the photoperiodism is flowering. Flowering is defined by the switch from the vegetative to the reproductive phase.","definition_xrefs":["ISBN:0582015952","ISBN:0697037754","GOC:pj","ISBN:0709408862","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of photoperiodism, flowering","termid":"GO:2000028"},{"relation_name":"regulates","term_name":"short-day photoperiodism, flowering","termid":"GO:0048575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of short-day photoperiodism, flowering","termid":"GO:0048587"}


id: PBO:0027928
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mating_efficiency_in_h-_cells","termid":"PBO:0027928"}


id: PBO:0072813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterile alpha motif domain containing 9","termid":"PBO:0072813"}


id: PBO:0064720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 56","termid":"PBO:0064720"}


id: PBO:0045580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxyuridine triphosphatase pseudogene 2","termid":"PBO:0045580"}


id: GO:0060937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to a cardiac fibroblast fate and their capacity to differentiate into cardiac fibroblast cells. A cardiac fibroblast is a connective tissue cell in the heart which secretes an extracellular matrix rich in collagen and other macromolecules.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell fate commitment","termid":"GO:0060911"},{"relation_name":"part_of","term_name":"cardiac fibroblast cell differentiation","termid":"GO:0060935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac fibroblast cell fate commitment","termid":"GO:0060937"}


id: MOD:00527
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation","definition_xrefs":["Unimod:159","DeltaMass:0","RESID:AA0151#var"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex3HexNAc2 N4-glycosylated asparagine","synonyms":[{"name":"(Hex)3-HexNAc-HexNAc","type":"exact"},{"name":"Hex(3)HexNAc(2)","type":"related"},{"name":"Hex3HexNAc2","type":"related"}],"termid":"MOD:00527"}


id: PR:O94631
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA methyltransferase 1, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03986","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA methyltransferase 1, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1347.13c","secondary_identifiers":["UniProtKB:O94631"],"synonyms":[{"name":"21S rRNA (guanosine-2'-O)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-MRM1","type":"exact"},{"name":"mitochondrial large ribosomal RNA ribose methylase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94631"}


id: PR:O13657
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC27B12.12c gene.","definition_xrefs":["UniProtKB:O13657","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metal ion transporter C27B12.12c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC27B12.12c","synonyms":[{"name":"Spom972h-SPBC27B12.12c","type":"exact"}],"termid":"PR:O13657"}


id: PBO:0047942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(14)(q24.1)","termid":"PBO:0047942"}


id: PR:Q10306
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A citrate synthase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00965","PRO:DNx","PANTHER:PTHR11739:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"citrate synthase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6C3.04","secondary_identifiers":["UniProtKB:Q10306"],"synonyms":[{"name":"Spom972h-CS","type":"exact"}],"termid":"PR:Q10306"}


id: PBO:0005502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate kinase domain family protein","termid":"PBO:0005502"}


id: GO:0035839
data:
  {"annotated_genes":["SJAG_00030","SJAG_00028","SJAG_03379","SJAG_00333","SJAG_03705","SJAG_03126","SJAG_01196","SJAG_02838","SJAG_04058"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[90765,93147,106670,111466,116101],"is_not":false,"summary":null,"term":"GO:0035839"},{"annotations":[102947,114000,119962,112804],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140472"}]},"cv_name":"cellular_component","definition":"A cell tip at which no growth takes place. For example, in fission yeast the cell end newly formed by cell division does not grow immediately upon its formation, and lacks actin cytoskeletal structures.","definition_xrefs":["GOC:expert_jd","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell tip","termid":"GO:0051286"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00028":null,"SJAG_00030":null,"SJAG_00333":null,"SJAG_01196":null,"SJAG_02838":null,"SJAG_03126":null,"SJAG_03379":null,"SJAG_03705":null,"SJAG_04058":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"non-growing cell tip","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"new cell end","type":"related"},{"name":"non-growing cell end","type":"exact"}],"termid":"GO:0035839","terms_by_termid":{"GO:0035839":null,"GO:0140472":null}}


id: PBO:0085522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S24, no bacterial homolog; RPS24B has a paralog, RPS24A, that arose from the whole genome duplication","termid":"PBO:0085522"}


id: MONDO:0010886
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chromosomal anomaly involving deletion of chromosome band 2q37 and manifests as three major clinical findings: developmental delay, skeletal malformations and facial dysmorphism.","definition_xrefs":["Orphanet:1001"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 2","termid":"MONDO:0016901"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2q37 microdeletion syndrome","secondary_identifiers":["MEDGEN:419169","SCTID:702357000","DECIPHER:44","DOID:0111704","GARD:10202","ICD9:758.39","OMIM:600430","UMLS:C2931817","MESH:C538317","NCIT:C129021"],"synonyms":[{"name":"2q37 deletion syndrome","type":"related"},{"name":"2q37 microdeletion syndrome","type":"exact"},{"name":"2q37 monosomy","type":"exact"},{"name":"Albright hereditary osteodystrophy type 3","type":"exact"},{"name":"Albright hereditary osteodystrophy-like syndrome","type":"exact"},{"name":"BDMR","type":"exact"},{"name":"Del(2)(q37)","type":"exact"},{"name":"brachydactyly intellectual disability syndrome","type":"exact"},{"name":"brachydactyly mental retardation syndrome","type":"exact"},{"name":"brachydactyly-intellectual disability syndrome","type":"exact"},{"name":"brachydactyly-mental retardation syndrome","type":"related"},{"name":"chromosome 2q37 deletion syndrome","type":"related"},{"name":"deletion 2q37","type":"exact"},{"name":"deletion 2q37-qter","type":"exact"},{"name":"monosomy 2q37-qter","type":"exact"}],"termid":"MONDO:0010886","xrefs":{"Monarch":{"xref_id":"0010886"}}}


id: PBO:0013094
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human HID1 ortholog 2","termid":"PBO:0013094"}


id: MONDO:0009065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cystinosis, nephropathic (obsolete MONDO:0009065)","termid":"MONDO:0009065","xrefs":{"Monarch":{"xref_id":"0009065"}}}


id: GO:0042462
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development of a photoreceptor, a sensory cell in the eye that reacts to the presence of light. They usually contain a pigment that undergoes a chemical change when light is absorbed, thus stimulating a nerve.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell development","termid":"GO:0042461"},{"relation_name":"part_of","term_name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell development","termid":"GO:0042462"}


id: GO:0032714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of interleukin-5 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of interleukin-5 production","termid":"GO:0032674"},{"relation_name":"negatively_regulates","term_name":"interleukin-5 production","termid":"GO:0032634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of interleukin-5 production","secondary_identifiers":["GO:0045406","GO:2000663"],"synonyms":[{"name":"down regulation of interleukin-5 production","type":"exact"},{"name":"down-regulation of interleukin-5 production","type":"exact"},{"name":"downregulation of interleukin-5 production","type":"exact"},{"name":"inhibition of interleukin-5 production","type":"narrow"},{"name":"negative regulation of IL-5 production","type":"exact"},{"name":"negative regulation of interleukin-5 biosynthetic process","type":"narrow"},{"name":"negative regulation of interleukin-5 secretion","type":"narrow"}],"termid":"GO:0032714"}


id: GO:0008192
data:
  {"annotated_genes":["SJAG_04233","SJAG_01724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004484"},{"annotations":[75448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008193"}]},"cv_name":"molecular_function","definition":"Catalysis of the posttranscriptional addition of a guanyl residue to the 5' end of an RNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01724":null,"SJAG_04233":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016779","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"RNA guanylyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0008192","terms_by_termid":{"GO:0004484":null,"GO:0008193":null}}


id: PBO:0120159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA binding protein, member of CCCH zinc finger family; similar to mammalian Tis11, which activates transcription and has role in mRNA degradation; functions with Tis11p in regulation of iron homeostasis; represses translation in response to iron limitation, downregulating multiple transcripts required for mitochondrial translation and heme biosynthesis; inhibits the iron-dependent ribosome recycling factor, Rli1p","termid":"PBO:0120159"}


id: GO:0140612
data:
  {"annotated_genes":["SJAG_00757","SJAG_02708","SJAG_02226","SJAG_02267","SJAG_01419","SJAG_01807","SJAG_02748","SJAG_02187","SJAG_01620","SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58401,57356,60616,69208,66021,60997,59458,64431,65345,62258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"}]},"cv_name":"molecular_function","definition":"A molecule that recognises toxic DNA structures, for example, double-strand breaks or collapsed replication forks, and initiates a signaling response.","definition_xrefs":["PMID:31995034"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00757":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02708":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140299","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"DNA damage sensor activity","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"DNA damage sensing activity","type":"exact"}],"termid":"GO:0140612","terms_by_termid":{"GO:0140664":null}}


id: PBO:0120333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMC5 antisense RNA 1","termid":"PBO:0120333"}


id: GO:0003055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the suprachiasmatic nucleus modulates heart rate at different values with a regularity of approximately 24 hours.","definition_xrefs":["GOC:mtg_cardio","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian regulation of heart rate","termid":"GO:0003053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian regulation of heart rate by the suprachiasmatic nucleus","synonyms":[{"name":"SCN regulation of heart rate","type":"exact"},{"name":"circadian regulation of heart contraction rate by the suprachiasmatic nucleus","type":"related"},{"name":"master pacemaker clock regulation of heart rate","type":"exact"}],"termid":"GO:0003055"}


id: PBO:0027360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_1,3-beta-D-glucan_synthase_activity_during_vegetative_growth","termid":"PBO:0027360"}


id: PBO:0087406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Substrate-recruiting cofactor of the Cdc48p-Npl4p-Ufd1p segregase; assists Cdc48p in the dislocation of misfolded, polyubiquitinated ERAD substrates that are subsequently delivered to the proteasome for degradation; also involved in the regulated destruction of resident ER membrane proteins, such as HMG-CoA reductase (Hmg1/2p) and cytoplasmic proteins (Fbp1p); role in mobilizing membrane bound transcription factors by regulated ubiquitin/proteasome-dependent processing (RUP)","termid":"PBO:0087406"}


id: PBO:0043271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 1 member B","termid":"PBO:0043271"}


id: GO:0036178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a group of unicellular organisms grow in a threadlike, filamentous shape in response to a neutral pH (pH close to 7) stimulus.","definition_xrefs":["PMID:6374461","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to neutral pH","termid":"GO:0036176"},{"relation_name":"is_a","term_name":"filamentous growth of a population of unicellular organisms in response to pH","termid":"GO:0036177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"filamentous growth of a population of unicellular organisms in response to neutral pH","termid":"GO:0036178"}


id: GO:0071759
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of two identical immunoglobulin heavy chains of the IgX isotype and two identical immunoglobulin light chains, held together by disulfide bonds. An IgX immunoglobulin complex may be embedded in the plasma membrane or present in the extracellular space, in mucosal areas or other tissues, or circulating in the blood or lymph.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin complex","termid":"GO:0019814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgX immunoglobulin complex","termid":"GO:0071759"}


id: PBO:0058562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6504","termid":"PBO:0058562"}


id: GO:0141098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cytidine(34) in tRNA + S-adenosyl-L-methionine = 2'-O-methylcytidine(34) in tRNA + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["PMID:31943105","RHEA:43084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (cytidine) methyltransferase activity","termid":"GO:0016427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0140101","GO:0016741","GO:0140098","GO:0003824"],"is_obsolete":false,"name":"tRNA (cytidine(34)-2'-O)-methyltransferase activity","synonyms":[{"name":"tRNA (cytidine 34-2'-O)-methyltransferase activity","type":"exact"}],"termid":"GO:0141098"}


id: SO:0000129
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that is silenced by DNA methylation.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"silenced_by_DNA_methylation","termid":"SO:0000895"},{"relation_name":"is_a","term_name":"gene_silenced_by_DNA_modification","termid":"SO:0000128"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_silenced_by_DNA_methylation","synonyms":[{"name":"gene silenced by DNA methylation","type":"exact"},{"name":"methylation-silenced gene","type":"exact"}],"termid":"SO:0000129"}


id: PBO:0065726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader-Willi region non-protein coding RNA 3","termid":"PBO:0065726"}


id: PBO:0057108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 198","termid":"PBO:0057108"}


id: FYPO:0005205
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the rate or occurrence of DNA polymerase processivity factor activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA polymerase processivity factor activity","termid":"FYPO:0004499"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"increased DNA polymerase processivity factor activity","termid":"FYPO:0005205"}


id: GO:0103035
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3 H+ + methyl-1,4-benzoquinone + NADPH = methyl-1,4-benzoquinol + NADP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete NADPH:methyl-1,4-benzoquinone oxidoreductase activity (obsolete GO:0103035)","termid":"GO:0103035"}


id: PBO:0089793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR1-SEACIT GTPase complex subunit Npr2","termid":"PBO:0089793"}


id: FYPO:0004526
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which any process of regulation of transcription is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription regulation phenotype","termid":"FYPO:0000143"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal regulation of transcription","synonyms":[{"name":"abnormal regulation of cellular transcription, DNA-dependent","type":"exact"},{"name":"abnormal regulation of gene-specific transcription","type":"related"},{"name":"abnormal regulation of transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0004526"}


id: GO:1902299
data:
  {"annotated_genes":["SJAG_00247","SJAG_02074","SJAG_02607"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[117083,105340,112613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"}]},"cv_name":"biological_process","definition":"Any pre-replicative complex assembly that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"pre-replicative complex assembly","termid":"GO:0036388"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00247":null,"SJAG_02074":null,"SJAG_02607":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0006260","GO:0008150","GO:0065003","GO:0007049","GO:0044085","GO:0006259"],"is_obsolete":false,"name":"pre-replicative complex assembly involved in cell cycle DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pre-RC assembly involved in cell cycle DNA replication","type":"exact"},{"name":"pre-replication complex assembly involved in cell cycle DNA replication","type":"related"}],"termid":"GO:1902299","terms_by_termid":{"GO:1902985":null}}


id: PBO:0035954
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_negative_regulation_of_protein_kinase_activity_during_mitosis","termid":"PBO:0035954"}


id: PBO:0083157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; almost completely overlaps ORF YNL227C/JJJ1","termid":"PBO:0083157"}


id: MONDO:1011165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis, non-human animal","termid":"MONDO:1010297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, sheep","secondary_identifiers":["OMIA:000747-9940"],"termid":"MONDO:1011165","xrefs":{"Monarch":{"xref_id":"1011165"}}}


id: GO:0021702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature cerebellar Purkinje cell. Differentiation includes the processes involved in commitment of a neuroblast to a Purkinje cell fate. A Purkinje cell is an inhibitory GABAergic neuron found in the cerebellar cortex that projects to the deep cerebellar nuclei and brain stem.","definition_xrefs":["PMID:15157725","GOC:jid","GOC:cls","GOC:dph","GO_REF:0000021","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"cerebellar Purkinje cell layer formation","termid":"GO:0021694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar Purkinje cell differentiation","termid":"GO:0021702"}


id: MONDO:0021047
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, malignant, or borderline circumscribed biphasic neoplasm that arises from the breast. It usually affects middle-aged women. It is characterized by the presence of a double layer of epithelial cells that are arranged in clefts, surrounded by a spindle cell mesenchymal (stromal) component.","definition_xrefs":["NCIT:C7575"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phyllodes tumor","termid":"MONDO:0005078"},{"relation_name":"is_a","term_name":"breast fibroepithelial neoplasm","termid":"MONDO:0021046"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast phyllodes tumor","secondary_identifiers":["ONCOTREE:PT","SCTID:712989008","UMLS:C0238031","MEDGEN:65943"],"synonyms":[{"name":"breast cystosarcoma phyllodes","type":"exact"},{"name":"breast phyllodes neoplasm","type":"exact"},{"name":"breast phyllodes tumor","type":"exact"},{"name":"cystosarcoma phyllodes of breast","type":"exact"},{"name":"cystosarcoma phyllodes of the breast","type":"exact"},{"name":"cystosarcoma phylloides - breast","type":"exact"},{"name":"cystosarcoma phylloides of the breast","type":"exact"},{"name":"phyllodes breast neoplasm","type":"exact"},{"name":"phyllodes breast tumor","type":"exact"},{"name":"phyllodes breast tumour","type":"exact"},{"name":"phyllodes neoplasm of breast","type":"exact"},{"name":"phyllodes neoplasm of the breast","type":"exact"},{"name":"phyllodes tumor of breast","type":"exact"},{"name":"phyllodes tumor of the breast","type":"exact"},{"name":"phyllodes tumour of breast","type":"exact"},{"name":"phyllodes tumour of the breast","type":"exact"}],"termid":"MONDO:0021047","xrefs":{"Monarch":{"xref_id":"0021047"}}}


id: PBO:0091641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Grt1","termid":"PBO:0091641"}


id: PBO:0003514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sfb3 (predicted)","termid":"PBO:0003514"}


id: PBO:0088727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog","termid":"PBO:0088727"}


id: GO:0071613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of granzyme B due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:add","GOC:rv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator of immune response","termid":"GO:0002440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"granzyme B production","termid":"GO:0071613"}


id: MONDO:0007304
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical vertebral Bridge","secondary_identifiers":["UMLS:C1861694","MEDGEN:348426","OMIM:118000"],"synonyms":[{"name":"cervical vertebral Bridge","type":"exact"}],"termid":"MONDO:0007304","xrefs":{"Monarch":{"xref_id":"0007304"}}}


id: PBO:0110387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL antisense RNA 1","termid":"PBO:0110387"}


id: PBO:0049213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor NMDA type subunit associated protein 1","termid":"PBO:0049213"}


id: PBO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat protein Ppk3","termid":"PBO:0002190"}


id: MONDO:0011338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory condition characterized by erythroderma, desquamation, alopecia, chronic diarrhea, failure to thrive, lymphadenopathy, and hepatosplenomegaly, associated with severe combined immunodeficiency (SCID).","definition_xrefs":["Orphanet:39041"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"},{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Omenn syndrome","secondary_identifiers":["OMIM:603554","MedDRA:10069097","DOID:0060010","MEDGEN:398130","UMLS:C2700553","GARD:8198","SCTID:722067005","NANDO:1200324","NANDO:2200697","NCIT:C61240"],"synonyms":[{"name":"Omenn syndrome","type":"exact"},{"name":"combined immunodeficiency with hypereosinophilia","type":"exact"},{"name":"reticuloendotheliosis familial with eosinophilia","type":"related"},{"name":"reticuloendotheliosis, familial, with eosinophilia","type":"related"},{"name":"severe combined immunodeficiency with hypereosinophilia","type":"related"}],"termid":"MONDO:0011338","xrefs":{"Monarch":{"xref_id":"0011338"}}}


id: PBO:0024815
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-capable_of_part_of","termid":"PBO:0024815"}


id: MONDO:0009602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metaphyseal modeling abnormality, skin lesions, and spastic paraplegia","secondary_identifiers":["MESH:C535875","MEDGEN:343282","UMLS:C1855164","OMIM:250500"],"synonyms":[{"name":"Roy Maroteaux Kremp syndrome","type":"related"},{"name":"metaphyseal modeling abnormality, skin lesions, and spastic paraplegia","type":"exact"}],"termid":"MONDO:0009602","xrefs":{"Monarch":{"xref_id":"0009602"}}}


id: GO:0010567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of a ketone, carried out by individual cells.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of ketone metabolic process","termid":"GO:0010565"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of ketone catabolic process","termid":"GO:0010567"}


id: GO:0000812
data:
  {"annotated_genes":["SJAG_04355","SJAG_02500","SJAG_02466","SJAG_03694","SJAG_03579","SJAG_03036","SJAG_03145","SJAG_02798","SJAG_04097","SJAG_05282","SJAG_02385","SJAG_04596","SJAG_02571","SJAG_01465","SJAG_02990","SJAG_05192"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72046,74874,75622,78238,78901,81960,94381,98658,100244,100975,109914,111104,115202,115373,116771,119515],"is_not":false,"summary":null,"term":"GO:0000812"}]},"cv_name":"cellular_component","definition":"A multisubunit protein complex that is involved in chromatin remodeling. It is required for the incorporation of the histone variant H2AZ into chromatin. In S. cerevisiae, the complex contains Swr1p, a Swi2/Snf2-related ATPase, and 12 additional subunits.","definition_xrefs":["PMID:14645854","PMID:14690608","PMID:19355820","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase complex","termid":"GO:0000118"},{"relation_name":"is_a","term_name":"INO80-type complex","termid":"GO:0097346"},{"relation_name":"part_of","term_name":"nuclear chromosome","termid":"GO:0000228"}],"gene_count":16,"genes_by_uniquename":{"SJAG_01465":null,"SJAG_02385":null,"SJAG_02466":null,"SJAG_02500":null,"SJAG_02571":null,"SJAG_02798":null,"SJAG_02990":null,"SJAG_03036":null,"SJAG_03145":null,"SJAG_03579":null,"SJAG_03694":null,"SJAG_04097":null,"SJAG_04355":null,"SJAG_04596":null,"SJAG_05192":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005575","GO:0005694","GO:0005634"],"is_obsolete":false,"name":"Swr1 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SWR-C","type":"exact"}],"termid":"GO:0000812","terms_by_termid":{"GO:0000812":null}}


id: GO:0010572
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue.","definition_xrefs":["GOC:sl","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of platelet activation","termid":"GO:0010543"},{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"positively_regulates","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet activation","termid":"GO:0010572"}


id: GO:0022009
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The differentiation of endothelial cells from progenitor cells during blood vessel development, and the de novo formation of blood vessels and tubes in the central nervous system. The capillary endothelial cells in the brain are specialized to form the blood-brain barrier.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:jid","GOC:dph","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculogenesis","termid":"GO:0001570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"central nervous system vasculogenesis","termid":"GO:0022009"}


id: PBO:0084101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guanylate kinase; converts GMP to GDP; required for growth and mannose outer chain elongation of cell wall N-linked glycoproteins","termid":"PBO:0084101"}


id: FYPO:0004047
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains two nuclei and pieces of a septum that does not completely bisect the cell.","definition_xrefs":["PMID:21931816","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"fragmented septum","termid":"FYPO:0004042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000032","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"binucleate vegetative cell with fragmented septum","synonyms":[{"name":"binucleate cells with fragmented septum during vegetative growth","type":"exact"},{"name":"binucleate vegetative cell with fragmented septum during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004047"}


id: GO:0044416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation by an organism of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host defense response (obsolete GO:0044416)","synonyms":[{"name":"activation by symbiont of host defense response","type":"exact"},{"name":"activation of host defense response","type":"exact"},{"name":"induction by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host defense response","type":"related"},{"name":"stimulation by symbiont of host defense response","type":"related"},{"name":"up regulation by symbiont of host defense response","type":"related"},{"name":"up-regulation by symbiont of host defense response","type":"related"},{"name":"upregulation by symbiont of host defense response","type":"related"}],"termid":"GO:0044416"}


id: MONDO:0013929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the TSPEAR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 98","secondary_identifiers":["GARD:22644","MEDGEN:766846","DOID:0110540","OMIM:614861","UMLS:C3553932"],"synonyms":[{"name":"DFNB98","type":"narrow"},{"name":"TSPEAR autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"autosomal recessive deafness 98","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 98","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in TSPEAR","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 98","type":"narrow"},{"name":"autosomal recessive nonsyndromic hearing loss 98","type":"exact"},{"name":"deafness, autosomal recessive 98","type":"narrow"},{"name":"deafness, autosomal recessive type 98","type":"narrow"}],"termid":"MONDO:0013929","xrefs":{"Monarch":{"xref_id":"0013929"}}}


id: PBO:0059760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 34","termid":"PBO:0059760"}


id: PBO:0111798
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch domain","termid":"PBO:0111798"}


id: PBO:0120794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MRE11 double strand break repair nuclease","termid":"PBO:0120794"}


id: GO:0038019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that results in the return of a Wnt receptor to an active state at the plasma membrane. An active state is when the receptor is ready to receive a Wnt signal. Internalized Wnt receptors can be recycled to the plasma membrane or sorted to lysosomes for protein degradation.","definition_xrefs":["PMID:19643732","GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor recycling","termid":"GO:0001881"},{"relation_name":"part_of","term_name":"positive regulation of Wnt signaling pathway","termid":"GO:0030177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Wnt receptor recycling","synonyms":[{"name":"Frizzled recycling","type":"narrow"}],"termid":"GO:0038019"}


id: MOD:00386
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-lysine residue and a glycine residue to form L-lysine 5-imidazolinone glycine.","definition_xrefs":["RESID:AA0381","PubMed:10504696"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues (Gly)","termid":"MOD:01882"},{"relation_name":"is_a","term_name":"crosslinked glycine residue","termid":"MOD:02047"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-lysine 5-imidazolinone glycine","synonyms":[{"name":"(2-[(1S)-1,5-diaminopentyl]-5-oxo-4,5-dihydro-1H-imidazol-1-yl)acetic acid","type":"exact"},{"name":"2-[(S)-1,5-diaminopentanyl]-1-carboxymethyl-1-imidazolin-5-one","type":"exact"},{"name":"Anemonia majano fluorescent protein FP486 chromophore","type":"exact"},{"name":"CROSSLNK 5-imidazolinone (Lys-Gly)","type":"exact"},{"name":"L-lysine 5-imidazolinone glycine","type":"exact"},{"name":"[2-(1,5-diaminopentanyl)-5-oxo-4,5-dihydro-imidazol-1-yl]-acetic acid","type":"exact"},{"name":"lysyl-5-imidazolinone glycine","type":"exact"},{"name":"para-hydroxybenzylidene-imidazolidinone chromophore","type":"exact"}],"termid":"MOD:00386"}


id: PBO:0086223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that forms a complex with Thp3p; may have a role in transcription elongation and/or mRNA splicing; identified as a COP9 signalosome component but phenotype and interactions suggest it may not be involved with the signalosome","termid":"PBO:0086223"}


id: FYPO:0005625
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after exposure to ultraviolet light during S phase of the mitotic cell cycle.","definition_xrefs":["PMID:26652183","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal viability following cellular response to UV","termid":"FYPO:0004662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002057","FYPO:0000003"],"is_obsolete":false,"name":"normal viability following cellular response to UV during mitotic S phase","synonyms":[{"name":"normal cell population viability following cellular response to UV during mitotic S phase","type":"exact"},{"name":"normal viability following UV exposure during mitotic S phase","type":"exact"},{"name":"normal viability following cellular response to UV during S phase of mitotic cell cycle","type":"exact"},{"name":"normal viability following cellular response to ultraviolet light during mitotic S phase","type":"exact"}],"termid":"FYPO:0005625"}


id: PBO:0092015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Phenylalanine (gaa), mitochondrial","termid":"PBO:0092015"}


id: MONDO:0017669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete disease with diffuse palmoplantar keratoderma as a major feature (obsolete MONDO:0017669)","secondary_identifiers":["Orphanet:307711"],"synonyms":[{"name":"disease with diffuse palmoplantar hyperkeratosis as a major feature","type":"exact"}],"termid":"MONDO:0017669","xrefs":{"Monarch":{"xref_id":"0017669"}}}


id: PBO:0078928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 2-4","termid":"PBO:0078928"}


id: PBO:0073346
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 8","termid":"PBO:0073346"}


id: PATO:0000364
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000364 bi-directional (obsolete PATO:0000364)","termid":"PATO:0000364"}


id: PBO:0073021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short coiled-coil protein pseudogene 1","termid":"PBO:0073021"}


id: PBO:0057613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1179","termid":"PBO:0057613"}


id: GO:0033520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytol, (2E,7R,11R)-3,7,11,15-tetramethylhexadec-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"phytol metabolic process","termid":"GO:0033306"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"fatty alcohol biosynthetic process","termid":"GO:1903175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"phytol biosynthetic process","synonyms":[{"name":"phytol anabolism","type":"exact"},{"name":"phytol biosynthesis","type":"exact"},{"name":"phytol formation","type":"exact"},{"name":"phytol synthesis","type":"exact"}],"termid":"GO:0033520"}


id: PBO:0003288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrp14-C (predicted)","termid":"PBO:0003288"}


id: MONDO:0044816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of idiopathic torsion dystonia that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"},{"relation_name":"is_a","term_name":"idiopathic torsion dystonia","termid":"MONDO:0044811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"familial idiopathic torsion dystonia","secondary_identifiers":["SCTID:230318005","NCIT:C35437","ICD10CM:G24.1","MEDGEN:95980","UMLS:C0393598"],"synonyms":[{"name":"familial Idiopathic dystonia","type":"exact"},{"name":"genetic torsion dystonia","type":"related"},{"name":"hereditary idiopathic torsion dystonia","type":"exact"},{"name":"idiopathic familial dystonia","type":"exact"}],"termid":"MONDO:0044816","xrefs":{"Monarch":{"xref_id":"0044816"}}}


id: PBO:0027058
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_wall_polysaccharide_level","termid":"PBO:0027058"}


id: PBO:0058182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4476","termid":"PBO:0058182"}


id: GO:0071492
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a UV-A radiation stimulus. UV-A radiation (UV-A light) spans the wavelengths 315 to 400 nm.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to UV","termid":"GO:0034644"},{"relation_name":"is_a","term_name":"response to UV-A","termid":"GO:0070141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to UV-A","synonyms":[{"name":"cellular response to UV-A light stimulus","type":"exact"},{"name":"cellular response to UV-A radiation stimulus","type":"exact"},{"name":"cellular response to UVA light stimulus","type":"exact"},{"name":"cellular response to UVA radiation stimulus","type":"exact"}],"termid":"GO:0071492"}


id: MONDO:0002314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conjunctivitis that is persistent and long-standing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctivitis","termid":"MONDO:0003799"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic conjunctivitis","secondary_identifiers":["NCIT:C35197","ICD9:372.1","DOID:2475","ICD10CM:H10.4","ICD9:372.10","MEDGEN:102326","UMLS:C0155145","SCTID:73762008","icd11.foundation:1548498139"],"synonyms":[{"name":"chronic conjunctivitis","type":"exact"},{"name":"chronic conjunctivitis (disease)","type":"exact"},{"name":"chronic conjunctivitis, unspecified","type":"exact"},{"name":"conjunctivitis (disease), chronic","type":"exact"}],"termid":"MONDO:0002314","xrefs":{"Monarch":{"xref_id":"0002314"}}}


id: GO:0102169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methyl-phenazine-1-carboxylate + 2 H+ + NADH + O2 = CO2 + H2O + NAD+ + pyocyanin. Also converts phenazine-1-carboxylate into 1-hydroxyphenazine.","definition_xrefs":["PMID:11591691","EC:1.14.13.218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"5-methylphenazine-1-carboxylate 1-monooxygenase (NADH) activity","synonyms":[{"name":"pyocyanin hydroxylase activity","type":"related"}],"termid":"GO:0102169"}


id: GO:1902982
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA strand elongation involved in meiotic cell cycle DNA replication.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation involved in nuclear cell cycle DNA replication","termid":"GO:1902319"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"},{"relation_name":"part_of","term_name":"premeiotic DNA replication","termid":"GO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259","GO:0007049"],"is_obsolete":false,"name":"DNA strand elongation involved in premeiotic DNA replication","synonyms":[{"name":"DNA strand elongation involved in meiotic cell cycle DNA replication","type":"exact"}],"termid":"GO:1902982"}


id: MONDO:0005016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Progressive kidney disorder caused by vascular damage to the glomerular capillaries, in patients with diabetes mellitus. It is usually manifested with nephritic syndrome and glomerulosclerosis.","definition_xrefs":["NCIT:C84417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"chronic kidney disease","termid":"MONDO:0005300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005240"],"is_obsolete":false,"name":"diabetic kidney disease","secondary_identifiers":["icd11.foundation:615062102","ICD9:583.81","ICD9:250.40","MEDGEN:8352","SCTID:127013003","SCTID:50620007","UMLS:C0011881","ICD9:250.4","EFO:0000401","MESH:D003928"],"synonyms":[{"name":"DKD","type":"exact"},{"name":"diabetic nephropathy","type":"exact"},{"name":"type 1 diabetes nephropathy","type":"narrow"},{"name":"type 2 diabetes nephropathy","type":"narrow"}],"termid":"MONDO:0005016","xrefs":{"Monarch":{"xref_id":"0005016"}}}


id: GO:0052772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of brefeldin A to produce brefeldin A acid. Brefeldin A is also known as gamma,4-dihydroxy-2-(6-hydroxy-1-heptenyl)-4-cyclopentanecrotonic acid lambda-lactone.","definition_xrefs":["PMID:10201402","GOC:mengo_curators","PMID:8106385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"brefeldin A esterase activity","synonyms":[{"name":"BFA esterase activity","type":"broad"},{"name":"brefeldin A hydrolase activity","type":"exact"}],"termid":"GO:0052772"}


id: MONDO:0010006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sandhoff disease is a lysosomal storage disorder from the GM2 gangliosidosis family and is characterized by central nervous system degeneration.","definition_xrefs":["Orphanet:796"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"is_a","term_name":"GM2 gangliosidosis","termid":"MONDO:0017720"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"is_a","term_name":"cerebral lipidosis with dementia","termid":"MONDO:0020143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0005066","MONDO:0005559","MONDO:0005244","MONDO:0005328","MONDO:0002039","MONDO:0002525"],"is_obsolete":false,"name":"Sandhoff disease","secondary_identifiers":["SCTID:23849003","UMLS:C0036161","MESH:D012497","NCIT:C85052","MEDGEN:11313","ICD10CM:E75.01","NORD:1688","DOID:3323","GARD:2521","NANDO:1200072","OMIM:268800","NANDO:2201200","icd11.foundation:708581915"],"synonyms":[{"name":"Beta-hexosaminidase-beta-subunit deficiency","type":"related"},{"name":"GM2 gangliosidosis 0 variant","type":"exact"},{"name":"GM2 gangliosidosis, 0 variant","type":"related"},{"name":"GM2 gangliosidosis, type 2","type":"related"},{"name":"GM2-gangliosidosis, type 2","type":"related"},{"name":"Hexosaminidases A and B deficiency","type":"exact"},{"name":"Hexosaminidases a and B deficiency","type":"related"},{"name":"Sandhoff Jatzkewitz disease","type":"exact"},{"name":"Sandhoff disease","type":"exact"},{"name":"Sandhoff disease, adult type","type":"related"},{"name":"Sandhoff disease, infantile type","type":"related"},{"name":"Sandhoff disease, infantile, juvenile, and adult forms","type":"exact"},{"name":"Sandhoff disease, juvenile type","type":"related"},{"name":"Sandhoff-Jatzkewitz-Pilz disease","type":"related"},{"name":"hexosaminidase A and B deficiency disease","type":"related"},{"name":"total hexosaminidase deficiency","type":"related"}],"termid":"MONDO:0010006","xrefs":{"Monarch":{"xref_id":"0010006"}}}


id: PBO:0112905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPI-remodelling mannose-ethanolamine phosphate phosphodiesterase Ted2","termid":"PBO:0112905"}


id: GO:0042431
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving indole (2,3-benzopyrrole), the basis of many biologically active substances (e.g. serotonin, tryptophan).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"indole-containing compound metabolic process","termid":"GO:0042430"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"indole metabolic process","synonyms":[{"name":"indole metabolism","type":"exact"}],"termid":"GO:0042431"}


id: PBO:0049683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxyacylglutathione hydrolase like","termid":"PBO:0049683"}


id: MONDO:0020282
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete metabolic disease with macular cherry-red spot (obsolete MONDO:0020282)","secondary_identifiers":["Orphanet:98714"],"termid":"MONDO:0020282","xrefs":{"Monarch":{"xref_id":"0020282"}}}


id: MONDO:0017540
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete postaxial polydactyly of toes, bilateral (obsolete MONDO:0017540)","secondary_identifiers":["Orphanet:295181"],"termid":"MONDO:0017540","xrefs":{"Monarch":{"xref_id":"0017540"}}}


id: MONDO:0014855
data:
  {"annotated_genes":["SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87614],"is_not":false,"summary":null,"term":"MONDO:0014855"}]},"cv_name":"mondo","definition":"Any autosomal dominant intellectual disability in which the cause of the disease is a heterozygous mutation in the GNB1 gene. It is characterized by global developmental delay, intellectual disability, hypotonia, structural brain abnormalities, and seizures. Other less common findings include dystonia, visual impairment, behavior problems, growth delay, craniofacial defects, and genitourinary abnormalities in males.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"excluded_subClassOf","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"excluded_subClassOf","term_name":"obsolete global developmental delay-neuro-ophthalmological abnormalities-seizures-intellectual disability syndrome (obsolete MONDO:0024252)","termid":"MONDO:0024252"},{"relation_name":"is_a","term_name":"intellectual disability, autosomal dominant","termid":"MONDO:0100172"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03081":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 42","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070072","MEDGEN:934741","OMIM:616973","GARD:18501","UMLS:C4310774","Orphanet:488613"],"synonyms":[{"name":"GNB1 autosomal dominant non-syndromic intellectual disability","type":"narrow"},{"name":"GNB1-related disorder","type":"exact"},{"name":"GNB1-related neurodevelopmental disorder","type":"exact"},{"name":"MRD42","type":"exact"},{"name":"autosomal dominant intellectual disability 42","type":"exact"},{"name":"autosomal dominant mental retardation 42","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 42","type":"narrow"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in GNB1","type":"narrow"},{"name":"global developmental delay-neuro-ophthalmological abnormalities-seizures-intellectual disability syndrome","type":"exact"},{"name":"intellectual developmental disorder, autosomal dominant 42","type":"exact"},{"name":"intellectual disability, autosomal dominant 42","type":"exact"},{"name":"intellectual disability, autosomal dominant type 42","type":"exact"},{"name":"mental retardation, autosomal dominant 42","type":"exact"},{"name":"mental retardation, autosomal dominant type 42","type":"exact"}],"termid":"MONDO:0014855","terms_by_termid":{"MONDO:0014855":null},"xrefs":{"Monarch":{"xref_id":"0014855"}}}


id: MONDO:0016045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tetragametic chimerism is a rare, sex chromosome disorder of sex development characterized by the two different haploid sets of maternal and paternal chromosomes and variable phenotype - from normal male or female genitalia, to different degrees of ambiguous genitalia, and often infertility. Also, in the cases of monochorionic dizygotic twins, it can be confined to blood of both twins.","definition_xrefs":["Orphanet:199310"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex chromosome disorder of sex development","termid":"MONDO:0017975"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism","secondary_identifiers":["MEDGEN:609542","GARD:20332","UMLS:C0432480"],"synonyms":[{"name":"46,XX/46,XY chimerism","type":"exact"}],"termid":"MONDO:0016045","xrefs":{"Monarch":{"xref_id":"0016045"}}}


id: PBO:0071689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 21","termid":"PBO:0071689"}


id: PBO:0069809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1095, pseudogene","termid":"PBO:0069809"}


id: GO:0001642
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A G protein-coupled receptor that is activated by L-AP-4 and inhibits adenylate cyclase activity.","definition_xrefs":["PMID:9016303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylate cyclase inhibiting G protein-coupled glutamate receptor activity","termid":"GO:0001640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"group III metabotropic glutamate receptor activity","termid":"GO:0001642"}


id: MONDO:0035448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A group of rare central nervous system malformations characterized by varying degrees of absence or dysplasia of the derivatives of the prosencephalon (i. e. telencephalon and diencephalon), with an intact cranial vault. The spectrum comprises atelencephaly, the less severe form, in which only the telencephalon is affected, and aprosencephaly, where the diencephalon is also involved. The malformations may occur in an isolated form or in association with other anomalies. [Orphanet:566847]","definition_xrefs":["Orphanet:566847"],"gene_count":0,"genotype_count":0,"name":"obsolete aprosencephaly/atelencephaly spectrum (obsolete MONDO:0035448)","termid":"MONDO:0035448","xrefs":{"Monarch":{"xref_id":"0035448"}}}


id: GO:2000501
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of natural killer cell chemotaxis.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte chemotaxis","termid":"GO:1901623"},{"relation_name":"regulates","term_name":"natural killer cell chemotaxis","termid":"GO:0035747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of natural killer cell chemotaxis","termid":"GO:2000501"}


id: PBO:0077915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPT1 pseudogene 6","termid":"PBO:0077915"}


id: PBO:0066816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 115","termid":"PBO:0066816"}


id: PBO:0040469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase c subunit lysine N-methyltransferase","termid":"PBO:0040469"}


id: PBO:0120674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCAAT-binding pioneer transcription factor complex subunit B, histone fold, Php3","termid":"PBO:0120674"}


id: GO:0009243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the O side chain of a lipopolysaccharide, which determines the antigenic specificity of the organism. It is made up of about 50 repeating units of a branched tetrasaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide biosynthetic process","termid":"GO:0000271"},{"relation_name":"is_a","term_name":"O antigen metabolic process","termid":"GO:0046402"},{"relation_name":"part_of","term_name":"lipopolysaccharide biosynthetic process","termid":"GO:0009103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0006629","GO:0005975"],"is_obsolete":false,"name":"O antigen biosynthetic process","synonyms":[{"name":"O antigen anabolism","type":"exact"},{"name":"O antigen biosynthesis","type":"exact"},{"name":"O antigen formation","type":"exact"},{"name":"O antigen synthesis","type":"exact"}],"termid":"GO:0009243"}


id: PBO:0003203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-acylglycerol-3-phosphate acyltransferase (predicted)","termid":"PBO:0003203"}


id: PBO:0079522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TYRO3P protein tyrosine kinase pseudogene","termid":"PBO:0079522"}


id: GO:0141154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont inhibits or disrupts the host shutoff of host translation, a host response that prevents mRNA in the cell to be translated, to prevent the symbiont from expressing its genes. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:20563710","PMID:21622569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of host defenses","termid":"GO:0044414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host-directed shutoff of host translation","termid":"GO:0141154"}


id: PBO:0088239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Stm1","termid":"PBO:0088239"}


id: PBO:0046344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 2","termid":"PBO:0046344"}


id: MONDO:0100515
data:
  {"annotated_genes":["SJAG_01410"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88549],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008002"}]},"cv_name":"mondo","definition":"A familial congenital mirror movement disorder where individuals with heterozygous variants in DCC have congenital mirror movements and/or agenesis of the corpus callosum (not with or without- some individuals do not demonstrate mirror movements and only have corpus callosum defects, even within the same family).","direct_ancestors":[{"relation_name":"is_a","term_name":"familial congenital mirror movements","termid":"MONDO:0016558"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01410":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"mirror movements 1 and/or agenesis of the corpus callosum","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0100515","terms_by_termid":{"MONDO:0008002":null},"xrefs":{"Monarch":{"xref_id":"0100515"}}}


id: GO:0103075
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(indol-3-yl)pyruvate + NADPH + O2 + H+ = indole-3-acetate + carbon dioxide + NADP + H2O.","definition_xrefs":["EC:1.14.13.168","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"indole-3-pyruvate monooxygenase activity","secondary_identifiers":["MetaCyc:RXNDQC-2","RHEA:34331"],"termid":"GO:0103075"}


id: GO:0097454
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Small finger-like extension of a Schwann cell that contacts the nodal membrane.","definition_xrefs":["PMID:15988042","NIF_Subcellular:sao1890444066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microvillus","termid":"GO:0005902"},{"relation_name":"is_a","term_name":"glial cell projection","termid":"GO:0097386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schwann cell microvillus","termid":"GO:0097454"}


id: PBO:0075008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-19","termid":"PBO:0075008"}


id: MONDO:1012700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hereditary connective tissue disorder characterized by extensive fibrosis of the skin and joints that occurs in dogs due to a mutation in the ADAMTSL2 gene.","definition_xrefs":["PMID:28158899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geleophysic dysplasia, ADMATSL2-related, dog","secondary_identifiers":["OMIA:001509-9615"],"synonyms":[{"name":"Chinese beagle syndrome, dog","type":"related"},{"name":"Musladin-Lueke syndrome","type":"exact"}],"termid":"MONDO:1012700","xrefs":{"Monarch":{"xref_id":"1012700"}}}


id: GO:1900181
data:
  {"annotated_genes":["SJAG_01084","SJAG_01311"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116530],"is_not":false,"summary":null,"term":"GO:1900181"},{"annotations":[107837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042308"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to nucleus.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to nucleus","termid":"GO:1900180"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"negatively_regulates","term_name":"protein localization to nucleus","termid":"GO:0034504"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01084":null,"SJAG_01311":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to nucleus","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation to nucleus","type":"exact"},{"name":"down regulation of protein localization in cell nucleus","type":"exact"},{"name":"down regulation of protein localization in nucleus","type":"exact"},{"name":"down regulation of protein localization to nucleus","type":"exact"},{"name":"down-regulation of protein localisation to nucleus","type":"exact"},{"name":"down-regulation of protein localization in cell nucleus","type":"exact"},{"name":"down-regulation of protein localization in nucleus","type":"exact"},{"name":"down-regulation of protein localization to nucleus","type":"exact"},{"name":"downregulation of protein localisation to nucleus","type":"exact"},{"name":"downregulation of protein localization in cell nucleus","type":"exact"},{"name":"downregulation of protein localization in nucleus","type":"exact"},{"name":"downregulation of protein localization to nucleus","type":"exact"},{"name":"inhibition of protein localisation to nucleus","type":"narrow"},{"name":"inhibition of protein localization in cell nucleus","type":"narrow"},{"name":"inhibition of protein localization in nucleus","type":"narrow"},{"name":"inhibition of protein localization to nucleus","type":"narrow"},{"name":"negative regulation of protein localisation to nucleus","type":"exact"},{"name":"negative regulation of protein localization in cell nucleus","type":"exact"},{"name":"negative regulation of protein localization in nucleus","type":"exact"}],"termid":"GO:1900181","terms_by_termid":{"GO:0042308":null,"GO:1900181":null}}


id: PR:O74423
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ent1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epsin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.07","synonyms":[{"name":"Spom972h-ent1","type":"exact"}],"termid":"PR:O74423"}


id: PBO:0061660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 35","termid":"PBO:0061660"}


id: PBO:0081002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 40","termid":"PBO:0081002"}


id: GO:0061125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of a chlorinated alkylphenone. An alkylphenone is an aromatic polyketide with methyl and chlorine substitutions.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061119"},{"relation_name":"is_a","term_name":"negative regulation of positive chemotaxis to cAMP","termid":"GO:0061123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061125"}


id: PBO:0062832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odd-skipped related transciption factor 2","termid":"PBO:0062832"}


id: PBO:0069744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1025, pseudogene","termid":"PBO:0069744"}


id: MONDO:0013266
data:
  {"annotated_genes":["SJAG_00210","SJAG_02218"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88156,88157],"is_not":false,"summary":null,"term":"MONDO:0013266"}]},"cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the MEF2C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00210":null,"SJAG_02218":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 20","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613443","DOID:0070050","NORD:2013","MEDGEN:462050","Orphanet:664410","UMLS:C3150700"],"synonyms":[{"name":"MEF2C Deficiency","type":"exact"},{"name":"MEF2C autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"MRD20","type":"exact"},{"name":"autosomal dominant intellectual disability 20","type":"related"},{"name":"autosomal dominant mental retardation 20","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in MEF2C","type":"exact"},{"name":"chromosome 5Q14.3 deletion syndrome, proximal","type":"related"},{"name":"chromosome 5q14.3 deletion syndrome","type":"exact"},{"name":"intellectual disability, autosomal dominant 20","type":"exact"},{"name":"intellectual disability, autosomal dominant type 20","type":"exact"},{"name":"intellectual disability, stereotypic movements, epilepsy, and/or cerebral malformations","type":"related"},{"name":"mental retardation, autosomal dominant 20","type":"exact"},{"name":"mental retardation, autosomal dominant type 20","type":"exact"},{"name":"mental retardation, stereotypic movements, epilepsy, and/or cerebral malformations","type":"related"},{"name":"neurodevelopmental disorder with hypotonia, stereotypic hand movements, and impaired language","type":"exact"}],"termid":"MONDO:0013266","terms_by_termid":{"MONDO:0013266":null},"xrefs":{"Monarch":{"xref_id":"0013266"}}}


id: PBO:0065882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB32, member RAS oncogene family","termid":"PBO:0065882"}


id: PBO:0108695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP, GTPase activating protein","termid":"PBO:0108695"}


id: GO:0036211
data:
  {"annotated_genes":["SJAG_02082","SJAG_00251","SJAG_03616","SJAG_03325","SJAG_00604","SJAG_01164","SJAG_00033","SJAG_00795","SJAG_04846","SJAG_00235","SJAG_01418","SJAG_05297","SJAG_03950","SJAG_02503","SJAG_02764","SJAG_01776","SJAG_01858","SJAG_03733","SJAG_03843","SJAG_00776","SJAG_00878","SJAG_00720","SJAG_00727","SJAG_04948","SJAG_01058","SJAG_01018","SJAG_04085","SJAG_02467","SJAG_00615","SJAG_04544","SJAG_04011","SJAG_05977","SJAG_03896","SJAG_05032","SJAG_01302","SJAG_02341"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68400],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904380"},{"annotations":[80736,82386,91649,93463,97311,72975,112383,108524,94897,95018],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000338"},{"annotations":[82063,81060,120859,68430,60151,60481,78975,79815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017183"},{"annotations":[107263],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009249"},{"annotations":[74850,77022,91257,76122,73318,81626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045116"},{"annotations":[74454,77509,74472,77626,99768,116704,77402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016925"},{"annotations":[72615,76151,62947],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032447"}]},"cv_name":"biological_process","definition":"The covalent alteration of one or more amino acids occurring in proteins, peptides and nascent polypeptides (co-translational, post-translational modifications). Includes the modification of charged tRNAs that are destined to occur in a protein (pre-translation modification).","definition_xrefs":["GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein metabolic process","termid":"GO:0019538"},{"relation_name":"is_a","term_name":"macromolecule modification","termid":"GO:0043412"}],"gene_count":36,"genes_by_uniquename":{"SJAG_00033":null,"SJAG_00235":null,"SJAG_00251":null,"SJAG_00604":null,"SJAG_00615":null,"SJAG_00720":null,"SJAG_00727":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_00878":null,"SJAG_01018":null,"SJAG_01058":null,"SJAG_01164":null,"SJAG_01302":null,"SJAG_01418":null,"SJAG_01776":null,"SJAG_01858":null,"SJAG_02082":null,"SJAG_02341":null,"SJAG_02467":null,"SJAG_02503":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03616":null,"SJAG_03733":null,"SJAG_03843":null,"SJAG_03896":null,"SJAG_03950":null,"SJAG_04011":null,"SJAG_04085":null,"SJAG_04544":null,"SJAG_04846":null,"SJAG_04948":null,"SJAG_05032":null,"SJAG_05297":null,"SJAG_05977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein modification process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006464"],"synonyms":[{"name":"cellular protein modification process","type":"exact"},{"name":"process resulting in protein modification","type":"exact"},{"name":"protein modification","type":"exact"}],"termid":"GO:0036211","terms_by_termid":{"GO:0000338":null,"GO:0009249":null,"GO:0016925":null,"GO:0017183":null,"GO:0032447":null,"GO:0045116":null,"GO:1904380":null}}


id: PBO:0045730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E4F transcription factor 1","termid":"PBO:0045730"}


id: PBO:0053498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 477","termid":"PBO:0053498"}


id: PBO:0060398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 binding protein 2 like 2","termid":"PBO:0060398"}


id: MONDO:0013479
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the BAG3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1HH","secondary_identifiers":["GARD:15726","MEDGEN:462643","DOID:0110448","OMIM:613881","UMLS:C3151293"],"synonyms":[{"name":"BAG3 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"CMD1HH","type":"exact"},{"name":"cardiomyopathy, dilated, 1HH","type":"related"},{"name":"cardiomyopathy, dilated, type 1Hh","type":"exact"},{"name":"dilated cardiomyopathy type 1HH","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in BAG3","type":"exact"}],"termid":"MONDO:0013479","xrefs":{"Monarch":{"xref_id":"0013479"}}}


id: GO:0008276
data:
  {"annotated_genes":["SJAG_01425","SJAG_04159","SJAG_02873","SJAG_02659","SJAG_02692","SJAG_00508","SJAG_03949","SJAG_02756","SJAG_00943","SJAG_01536","SJAG_00286","SJAG_01482","SJAG_03630","SJAG_05016","SJAG_03228","SJAG_00596","SJAG_03869","SJAG_00769","SJAG_02868","SJAG_01146","SJAG_03548","SJAG_02660","SJAG_02271","SJAG_01079","SJAG_02350","SJAG_01193","SJAG_01054","SJAG_04574","SJAG_02467","SJAG_03487"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119242],"is_not":false,"summary":null,"term":"GO:0008276"},{"annotations":[60150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141133"},{"annotations":[112247,75242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"},{"annotations":[97496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140954"},{"annotations":[80540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046975"},{"annotations":[65548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140955"},{"annotations":[58566],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062122"},{"annotations":[80539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042800"},{"annotations":[59281],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140999"},{"annotations":[112544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140948"},{"annotations":[63978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140949"},{"annotations":[112546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140947"},{"annotations":[119084],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140943"},{"annotations":[72898,78315,78454,115582],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042054"},{"annotations":[65194,79300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071885"},{"annotations":[98495,97514],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102559"},{"annotations":[82179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019702"},{"annotations":[78096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018423"},{"annotations":[77382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004671"},{"annotations":[64977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016274"},{"annotations":[114723,102442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035242"},{"annotations":[102443,114724],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035241"},{"annotations":[89660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018064"},{"annotations":[71985,79601,78316,75511,73978,80363,76990,65193,118884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016279"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group (CH3-) to a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00286":null,"SJAG_00508":null,"SJAG_00596":null,"SJAG_00769":null,"SJAG_00943":null,"SJAG_01054":null,"SJAG_01079":null,"SJAG_01146":null,"SJAG_01193":null,"SJAG_01425":null,"SJAG_01482":null,"SJAG_01536":null,"SJAG_02271":null,"SJAG_02350":null,"SJAG_02467":null,"SJAG_02659":null,"SJAG_02660":null,"SJAG_02692":null,"SJAG_02756":null,"SJAG_02868":null,"SJAG_02873":null,"SJAG_03228":null,"SJAG_03487":null,"SJAG_03548":null,"SJAG_03630":null,"SJAG_03869":null,"SJAG_03949":null,"SJAG_04159":null,"SJAG_04574":null,"SJAG_05016":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741","GO:0140096"],"is_obsolete":false,"name":"protein methyltransferase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9632182"],"synonyms":[{"name":"protein methylase activity","type":"exact"}],"termid":"GO:0008276","terms_by_termid":{"GO:0004671":null,"GO:0008276":null,"GO:0016274":null,"GO:0016279":null,"GO:0018064":null,"GO:0018423":null,"GO:0019702":null,"GO:0035241":null,"GO:0035242":null,"GO:0042054":null,"GO:0042800":null,"GO:0046975":null,"GO:0062122":null,"GO:0071885":null,"GO:0102559":null,"GO:0140943":null,"GO:0140947":null,"GO:0140948":null,"GO:0140949":null,"GO:0140954":null,"GO:0140955":null,"GO:0140999":null,"GO:0141133":null,"GO:1990259":null}}


id: GO:0051480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of calcium ions within the cytosol of a cell or between the cytosol and its surroundings.","definition_xrefs":["GOC:ai","GOC:mah","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"regulation of cytosolic calcium ion concentration","synonyms":[{"name":"calcium ion homeostasis in cytoplasm","type":"broad"},{"name":"calcium ion homeostasis in cytosol","type":"exact"},{"name":"cytoplasmic calcium ion concentration regulation","type":"broad"},{"name":"cytoplasmic calcium ion homeostasis","type":"broad"},{"name":"cytosolic calcium ion concentration regulation","type":"exact"},{"name":"regulation of calcium ion concentration in cytoplasm","type":"broad"},{"name":"regulation of calcium ion concentration in cytosol","type":"exact"},{"name":"regulation of cytoplasmic calcium ion concentration","type":"broad"}],"termid":"GO:0051480"}


id: PBO:0078448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 1 (non-functional)","termid":"PBO:0078448"}


id: GO:0060317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["PMID:1996351","GOC:dph","GOC:BHF","PMID:16314491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial to mesenchymal transition","termid":"GO:0001837"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac epithelial to mesenchymal transition","synonyms":[{"name":"heart epithelial to mesenchymal transition","type":"exact"}],"termid":"GO:0060317"}


id: GO:0004178
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal amino acid, Xaa-Xbb-, in which Xaa is preferably Leu, but may be other amino acids including Pro although not Arg or Lys, and Xbb may be Pro.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete leucyl aminopeptidase activity (obsolete GO:0004178)","synonyms":[{"name":"leucyl aminopeptidase activity","type":"exact"}],"termid":"GO:0004178"}


id: PR:000027705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A kinesin-like motor protein klp9/SPBC15D4.01c unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:19686686","PMID:18257517","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinesin-like motor protein klp9/SPBC15D4.01c","termid":"PR:000027702"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"klp9/UnMod","pombase_gene_id":"SPBC15D4.01c","synonyms":[{"name":"PomBase_original_PRO_term_name: kinesin-like motor protein klp9/SPBC15D4.01c unmodified form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-klp9/UnMod","type":"exact"},{"name":"klp9/UnMod","type":"exact"}],"termid":"PR:000027705"}


id: PBO:0045522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DTNB antisense RNA 1","termid":"PBO:0045522"}


id: GO:0004245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the preferential cleavage at the amino group of hydrophobic residues in insulin, casein, hemoglobin, and a number of other proteins and polypeptides.","definition_xrefs":["GOC:curator"],"gene_count":0,"genotype_count":0,"name":"obsolete neprilysin activity (obsolete GO:0004245)","synonyms":[{"name":"CALLA","type":"related"},{"name":"CALLA (common acute lymphoblastic leukemia-associated) antigens","type":"related"},{"name":"CALLA antigen","type":"related"},{"name":"CALLA glycoprotein","type":"related"},{"name":"CALLA glycoproteins","type":"related"},{"name":"CD10","type":"related"},{"name":"acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia antigen","type":"related"},{"name":"common acute lymphoblastic leukemia-associated antigens","type":"related"},{"name":"endopeptidase 24.11","type":"related"},{"name":"endopeptidase-2 activity","type":"broad"},{"name":"enkephalinase activity","type":"related"},{"name":"kidney-brush-border neutral endopeptidase","type":"narrow"},{"name":"kidney-brush-border neutral peptidase","type":"narrow"},{"name":"kidney-brush-border neutral proteinase activity","type":"narrow"},{"name":"membrane metalloendopeptidase activity","type":"narrow"},{"name":"neprilysin activity","type":"exact"},{"name":"neutral endopeptidase 24.11","type":"related"},{"name":"neutral endopeptidase activity","type":"related"},{"name":"neutral metallendopeptidase activity","type":"related"}],"termid":"GO:0004245"}


id: PBO:0082441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B-type cyclin involved in cell cycle progression; also involved in response to DNA damage; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome; CLB2 has a paralog, CLB1, that arose from the whole genome duplication","termid":"PBO:0082441"}


id: PBO:0049508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A clustered histone 15","termid":"PBO:0049508"}


id: PBO:0051480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (V)-66 (pseudogene)","termid":"PBO:0051480"}


id: PBO:0005881
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein in cox1 intron-2","termid":"PBO:0005881"}


id: PR:Q9HGN5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC36B7.05c gene.","definition_xrefs":["UniProtKB:Q9HGN5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase C36B7.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC36B7.05c","synonyms":[{"name":"Spom972h-SPBC36B7.05c","type":"exact"}],"termid":"PR:Q9HGN5"}


id: FYPO:0002539
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleoplasm begins later than normal during a cellular response to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delayed onset of protein localization to nucleoplasm","termid":"FYPO:0002532"},{"relation_name":"is_a","term_name":"abnormal protein localization to nucleoplasm during cellular response to hydroxyurea","termid":"FYPO:0002537"},{"relation_name":"is_a","term_name":"delayed onset of protein localization to mitotic spindle","termid":"FYPO:0003226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea","synonyms":[{"name":"delayed onset of protein localisation to nucleoplasm during cellular response to hydroxyurea","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to HU","type":"exact"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to nucleoplasm during cellular response to hydroxyurea during vegetative growth","type":"exact"},{"name":"delayed protein localization to nucleoplasm during cellular response to hydroxyurea","type":"exact"}],"termid":"FYPO:0002539"}


id: PBO:0054335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1728","termid":"PBO:0054335"}


id: PBO:0061427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 1 group D member 1","termid":"PBO:0061427"}


id: FYPO:0004015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which a cell contains a normal number of mitochondria.","definition_xrefs":["PMID:2065367","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitochondrion","termid":"FYPO:0006034"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"mitochondria present in normal numbers","synonyms":[{"name":"mitochondria present in normal numbers during mitotic cell cycle","type":"exact"},{"name":"mitochondria present in normal numbers during vegetative growth","type":"exact"}],"termid":"FYPO:0004015"}


id: GO:0016571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of methyl groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone methylation (obsolete GO:0016571)","secondary_identifiers":["Wikipedia:Histone_methylation"],"termid":"GO:0016571"}


id: PBO:0081152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP91-CNTF readthrough (NMD candidate)","termid":"PBO:0081152"}


id: MONDO:0019105
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, syndromic renal disease characterized by the entrapment of left renal vein (LRV) between the superior mesenteric artery (SMA) and the abdominal aorta, resulting in increased luminal pressure, renal hilar varices, hematuria and, at the microscopic level, rupture of thin-walled veins into the collecting system in renal fornices.","definition_xrefs":["Orphanet:71273"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal nutcracker syndrome","secondary_identifiers":["UMLS:C3178770","MESH:D059228","GARD:11971","EFO:1001838","MEDGEN:465238","SCTID:717267005"],"synonyms":[{"name":"RNS","type":"exact"},{"name":"left renal vein entrapment syndrome","type":"exact"},{"name":"nutcracker syndrome","type":"related"}],"termid":"MONDO:0019105","xrefs":{"Monarch":{"xref_id":"0019105"}}}


id: PBO:0052441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF transcription factor 1","termid":"PBO:0052441"}


id: GO:0022877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein N-phosphohistidine + fructose(out) = protein histidine + fructose phosphate(in). This differs from primary and secondary active transport in that the solute is modified during transport.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"protein-N(PI)-phosphohistidine-sugar phosphotransferase activity","termid":"GO:0008982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0016740","GO:0005215","GO:0003824","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"protein-N(PI)-phosphohistidine-fructose phosphotransferase system transporter activity","synonyms":[{"name":"fructose PTS transporter activity","type":"exact"}],"termid":"GO:0022877"}


id: PBO:0003039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC transporter Abc3, unknown specificity","termid":"PBO:0003039"}


id: PBO:0004711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ESCRT III complex subunit (predicted)","termid":"PBO:0004711"}


id: MONDO:0019480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplastic proliferation of Langerhans cells with overtly malignant cytologic features. It can be considered a higher grade variant of Langerhans cell histiocytosis (LCH) and it can present de novo or progress from antecedent LCH. (WHO, 2001)","definition_xrefs":["NCIT:C6921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"Langerhans cell sarcoma","secondary_identifiers":["EFO:0007336","ICDO:9756/3","MEDGEN:266041","NANDO:2200036","Orphanet:86897","MESH:D054752","icd11.foundation:588958190","DOID:7146","GARD:10491","ONCOTREE:LCS","SCTID:724649000","icd11.foundation:933337476","UMLS:C1260327"],"synonyms":[{"name":"LCS","type":"related"},{"name":"Langerhans cell sarcoma","type":"exact"},{"name":"malignant Langerhans cell sarcoma","type":"related"},{"name":"sarcoma of Langerhans cell","type":"exact"}],"termid":"MONDO:0019480","xrefs":{"Monarch":{"xref_id":"0019480"}}}


id: PBO:0027275
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcription_during_vegetative_growth","termid":"PBO:0027275"}


id: PBO:0062905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress responsive kinase 1","termid":"PBO:0062905"}


id: PBO:0054564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1966","termid":"PBO:0054564"}


id: GO:1904453
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of hydrogen:potassium-exchanging ATPase activity.","definition_xrefs":["PMID:11897793","GO_REF:0000059","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of potassium:proton exchanging ATPase activity (obsolete GO:1904453)","synonyms":[{"name":"activation of (K+ + H+)-ATPase activity","type":"narrow"},{"name":"activation of ATP phosphohydrolase (H+/K+-exchanging)","type":"narrow"},{"name":"activation of H+-K+-ATPase activity","type":"narrow"},{"name":"activation of H+/K(+)-ATPase activity","type":"narrow"},{"name":"activation of H+/K(+)-exchanging ATPase activity","type":"narrow"},{"name":"activation of H+/K+-ATPase activity","type":"narrow"},{"name":"activation of H+/K+-exchanging ATPase activity","type":"narrow"},{"name":"activation of H,K-ATPase activity","type":"narrow"},{"name":"activation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"activation of gastric H+/K+ ATPase","type":"narrow"},{"name":"activation of hydrogen/potassium-exchanging ATPase activity","type":"narrow"},{"name":"activation of hydrogen:potassium exchanging ATPase activity","type":"narrow"},{"name":"activation of hydrogen:potassium-exchanging ATPase activity","type":"narrow"},{"name":"positive regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"positive regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"positive regulation of H+-K+-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of H+/K+-ATPase activity","type":"exact"},{"name":"positive regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of H,K-ATPase activity","type":"exact"},{"name":"positive regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"positive regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"positive regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"positive regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"up regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"up regulation of H+-K+-ATPase activity","type":"exact"},{"name":"up regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"up regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up regulation of H+/K+-ATPase activity","type":"exact"},{"name":"up regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"up regulation of H,K-ATPase activity","type":"exact"},{"name":"up regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"up regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"up regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"up regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"up regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"up-regulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"up-regulation of H+-K+-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of H+/K+-ATPase activity","type":"exact"},{"name":"up-regulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of H,K-ATPase activity","type":"exact"},{"name":"up-regulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"up-regulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"up-regulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"up-regulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of (K+ + H+)-ATPase activity","type":"exact"},{"name":"upregulation of ATP phosphohydrolase (H+/K+-exchanging)","type":"exact"},{"name":"upregulation of H+-K+-ATPase activity","type":"exact"},{"name":"upregulation of H+/K(+)-ATPase activity","type":"exact"},{"name":"upregulation of H+/K(+)-exchanging ATPase activity","type":"exact"},{"name":"upregulation of H+/K+-ATPase activity","type":"exact"},{"name":"upregulation of H+/K+-exchanging ATPase activity","type":"exact"},{"name":"upregulation of H,K-ATPase activity","type":"exact"},{"name":"upregulation of gastric H+/K(+) ATPase activity","type":"narrow"},{"name":"upregulation of gastric H+/K+ ATPase","type":"narrow"},{"name":"upregulation of hydrogen/potassium-exchanging ATPase activity","type":"exact"},{"name":"upregulation of hydrogen:potassium exchanging ATPase activity","type":"exact"},{"name":"upregulation of hydrogen:potassium-exchanging ATPase activity","type":"exact"}],"termid":"GO:1904453"}


id: GO:0034381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a lipoprotein particle is removed from the blood via receptor-mediated endocytosis and its constituent parts degraded.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb","GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"regulation of plasma lipoprotein particle levels","termid":"GO:0097006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"plasma lipoprotein particle clearance","secondary_identifiers":["Reactome:R-HSA-8964043"],"synonyms":[{"name":"lipoprotein particle clearance","type":"exact"}],"termid":"GO:0034381"}


id: MONDO:1012421
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuroaxonal dystrophy with cerebellar abiotrophy, non-human animal","termid":"MONDO:1011886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy with cerebellar abiotrophy, domestic cat","secondary_identifiers":["OMIA:001606-9685"],"termid":"MONDO:1012421","xrefs":{"Monarch":{"xref_id":"1012421"}}}


id: PBO:0040675
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAR1 scaffold protein, Cas family member","termid":"PBO:0040675"}


id: PBO:0053617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 658","termid":"PBO:0053617"}


id: GO:1902253
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of intrinsic apoptotic signaling pathway by p53 class mediator.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:TermGenie","GOC:rl","PMID:15705871"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction by p53 class mediator","termid":"GO:1901796"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway","termid":"GO:2001242"},{"relation_name":"regulates","term_name":"intrinsic apoptotic signaling pathway by p53 class mediator","termid":"GO:0072332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intrinsic apoptotic signaling pathway by p53 class mediator","synonyms":[{"name":"regulation of intrinsic apoptotic signaling pathway by signal transduction by p53 class mediator","type":"exact"},{"name":"regulation of signal transduction by p53 class mediator resulting in induction of apoptosis","type":"related"}],"termid":"GO:1902253"}


id: FYPO:0000827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which one or more cell cycle phase transitions begins earlier than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"premature cell cycle phase transition","synonyms":[{"name":"advanced cell cycle phase transition","type":"exact"},{"name":"premature cell cycle phase transition during mitotic cell cycle","type":"related"},{"name":"premature cell cycle phase transition during vegetative growth","type":"exact"},{"name":"premature cell cycle progression","type":"exact"},{"name":"premature cell cycle progression during vegetative growth","type":"exact"}],"termid":"FYPO:0000827"}


id: GO:0009508
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A circular DNA molecule containing plastid encoded genes.","definition_xrefs":["ISBN:0943088399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"},{"relation_name":"part_of","term_name":"plastid nucleoid","termid":"GO:0042646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005694","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"plastid chromosome","termid":"GO:0009508"}


id: PBO:0070717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 22","termid":"PBO:0070717"}


id: PR:A6X993
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X993"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C338.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.03c","synonyms":[{"name":"Spom972h-SPCC338.03c","type":"exact"}],"termid":"PR:A6X993"}


id: PBO:0065828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB6C, member RAS oncogene family","termid":"PBO:0065828"}


id: PBO:0085973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; predicted to encode a pyridoxal 5'-phosphate synthase based on sequence similarity but purified protein does not possess this activity, nor does it bind flavin mononucleotide (FMN); null mutant displays increased resistance to antifungal agents gliotoxin, cycloheximide and H2O2; YLR456W has a paralog, YPR172W, that arose from the whole genome duplication","termid":"PBO:0085973"}


id: GO:0005167
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a neurotrophin TRK receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurotrophin receptor binding","termid":"GO:0005165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"neurotrophin TRK receptor binding","synonyms":[{"name":"neurotrophin TRK receptor ligand","type":"narrow"}],"termid":"GO:0005167"}


id: PBO:0039150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AK3 pseudogene 5","termid":"PBO:0039150"}


id: PBO:0061215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar protein 7","termid":"PBO:0061215"}


id: PBO:0057597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 934","termid":"PBO:0057597"}


id: PBO:0017523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab GTPase binding Yip5 (predicted)","termid":"PBO:0017523"}


id: GO:0016296
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: hexadecanoyl-[ACP] + H2O = H+ + hexadecanoate + holo-[ACP].","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete palmitoyl-[acyl-carrier-protein] hydrolase activity (obsolete GO:0016296)","synonyms":[{"name":"palmitoyl-ACP hydrolase activity","type":"exact"},{"name":"palmitoyl-[acyl-carrier protein] hydrolase activity","type":"exact"}],"termid":"GO:0016296"}


id: PBO:0074563
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 17","termid":"PBO:0074563"}


id: MONDO:0002087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the peritoneum","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"peritoneal neoplasm","termid":"MONDO:0006901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"peritoneum cancer","secondary_identifiers":["NCIT:C3538","DOID:1725","MEDGEN:102270","ICD9:158.9","UMLS:C0153467","ICD9:159.8","SCTID:363492001","ICD9:158.8"],"synonyms":[{"name":"cancer of peritoneum","type":"exact"},{"name":"cancer of the peritoneum","type":"exact"},{"name":"malignant neoplasm of peritoneum","type":"exact"},{"name":"malignant peritoneal neoplasm","type":"exact"},{"name":"malignant peritoneum neoplasm","type":"exact"},{"name":"peritoneal cancer","type":"exact"},{"name":"peritoneal cavity cancer","type":"exact"},{"name":"peritoneal neoplasm","type":"related"},{"name":"peritoneum cancer","type":"exact"}],"termid":"MONDO:0002087","xrefs":{"Monarch":{"xref_id":"0002087"}}}


id: MONDO:0019617
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary deficiency","termid":"MONDO:0015127"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pituitary deficiency due to empty sella turcica syndrome","secondary_identifiers":["icd11.foundation:309067714","GARD:19163","SCTID:715668008","MEDGEN:902244","ICD10CM:E23.0","Orphanet:91354","UMLS:C4275064"],"synonyms":[{"name":"hypopituitarism due to empty sella turcica syndrome","type":"exact"}],"termid":"MONDO:0019617","xrefs":{"Monarch":{"xref_id":"0019617"}}}


id: GO:0098758
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-8 stimulus.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interleukin-8","synonyms":[{"name":"response to IL-8","type":"exact"}],"termid":"GO:0098758"}


id: GO:1900606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving tensidol B.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"tensidol B metabolic process","synonyms":[{"name":"tensidol B metabolism","type":"exact"}],"termid":"GO:1900606"}


id: PBO:0041840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer susceptibility 20","termid":"PBO:0041840"}


id: PBO:0082521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc42p-activated signal transducing kinase; member of the PAK (p21-activated kinase) family, along with Ste20p and Skm1p; involved in septin ring assembly, vacuole inheritance, cytokinesis, sterol uptake regulation; phosphorylates Cdc3p and Cdc10p; CLA4 has a paralog, SKM1, that arose from the whole genome duplication","termid":"PBO:0082521"}


id: PBO:0073992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 2","termid":"PBO:0073992"}


id: FYPO:0002177
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell has normal volume, dimensions and shape, and is viable.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"normal vegetative cell morphology","termid":"FYPO:0001315"},{"relation_name":"is_a","term_name":"viable vegetative cell","termid":"FYPO:0001491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000004","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"viable vegetative cell with normal cell morphology","synonyms":[{"name":"viable vegetative cell with normal cell shape and size","type":"exact"},{"name":"viable vegetative cell with normal morphology","type":"exact"}],"termid":"FYPO:0002177"}


id: MONDO:0008759
data:
  {"annotated_genes":["SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89013],"is_not":false,"summary":null,"term":"MONDO:0008759"}]},"cv_name":"mondo","definition":"A rare, genetic, inborn error of metabolism disorder characterized by neonatal-onset of developmental delay, hypotonia, hepatomegaly, lactic acidemia, increased creatine kinase levels, elevated alpha-ketoglutaric acid in urine, and a decreased plasma beta-hydroxybutyrate-to-acetoacetate ratio. Pyruvate dehydrogenase deficiency can be associated, leading to hypoglycemia and neurologic anomalies, including seizures.","definition_xrefs":["Orphanet:31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial metabolism disorder","termid":"MONDO:0004069"},{"relation_name":"is_a","term_name":"tricarboxylic acid cycle disorder","termid":"MONDO:0016790"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005244","MONDO:0005066"],"is_obsolete":false,"name":"oxoglutaricaciduria","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:414553","DOID:0081326","GARD:617","MESH:C536582","SCTID:733630004","UMLS:C2752074","OMIM:203740"],"synonyms":[{"name":"2 alpha ketoglutarate dehydrogenase deficiency","type":"related"},{"name":"2-ketoglutarate dehydrogenase deficiency","type":"related"},{"name":"ALPHA-ketoglutarate dehydrogenase deficiency","type":"related"},{"name":"Alpha KGD deficiency","type":"related"},{"name":"Alpha-Kgd deficiency","type":"related"},{"name":"Alpha-ketoglutarate dehydrogenase deficiency","type":"exact"},{"name":"Oxoglutaric aciduria","type":"related"},{"name":"oxoglutarate dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0008759","terms_by_termid":{"MONDO:0008759":null},"xrefs":{"Monarch":{"xref_id":"0008759"}}}


id: FYPO:0000841
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121605],"is_not":false,"summary":null,"term":"FYPO:0000841"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium dodecyl sulfate (SDS). Cells stop growing (and may die) at a concentration of SDS that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":1,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to sodium dodecyl sulfate","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta"],"synonyms":[{"name":"hypersensitive to sodium dodecyl sulfate","type":"exact"},{"name":"sensitive to SDS","type":"exact"},{"name":"sensitive to sodium dodecyl sulfate during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium dodecyl sulfate during vegetative growth","type":"exact"},{"name":"sensitive to sodium dodecyl sulphate","type":"exact"}],"termid":"FYPO:0000841","terms_by_termid":{"FYPO:0000841":null,"FYPO_EXT:0000001":null}}


id: PR:O59834
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-specific adenosine deaminase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.14c","secondary_identifiers":["UniProtKB:O59834"],"synonyms":[{"name":"Spom972h-tadA","type":"exact"},{"name":"cytosine aminohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59834"}


id: MONDO:1010050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hyperplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"},{"relation_name":"is_a","term_name":"inborn errors of metabolism, non-human animal","termid":"MONDO:1012979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hyperplasia, non-human animal","secondary_identifiers":["OMIA:000017"],"termid":"MONDO:1010050","xrefs":{"Monarch":{"xref_id":"1010050"}}}


id: GO:0003906
data:
  {"annotated_genes":["SJAG_03724","SJAG_02298","SJAG_03665"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75143,81845],"is_not":false,"summary":null,"term":"GO:0003906"},{"annotations":[66905],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140078"}]},"cv_name":"molecular_function","definition":"Catalysis of the cleavage of the C-O-P bond in the AP site created when DNA glycosylase removes a damaged base, involved in the DNA base excision repair pathway (BER).","definition_xrefs":["Wikipedia:AP_endonuclease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02298":null,"SJAG_03665":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0140097"],"is_obsolete":false,"name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5649711","Reactome:R-HSA-5649725","Reactome:R-HSA-110375"],"synonyms":[{"name":"AP deoxyendoribonuclease activity","type":"exact"},{"name":"UV endonuclease","type":"broad"},{"name":"abasic deoxyendoribonuclease activity","type":"exact"},{"name":"apurinic deoxyendoribonuclease activity","type":"exact"},{"name":"apurinic/apyrimidinic endodeoxyribonuclease activity","type":"exact"},{"name":"apyrimidinic deoxyendoribonuclease activity","type":"exact"},{"name":"deoxyribonuclease (apurinic or apyrimidinic) activity","type":"exact"},{"name":"endonuclease VIII activity","type":"related"}],"termid":"GO:0003906","terms_by_termid":{"GO:0003906":null,"GO:0140078":null}}


id: PBO:0056028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipolysis stimulated lipoprotein receptor","termid":"PBO:0056028"}


id: PBO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome C oxidase transmembrane region","termid":"PBO:0002231"}


id: GO:0099613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of directing proteins towards the cell-wall.","definition_xrefs":["ISBN:0716731363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cell periphery","termid":"GO:1990778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cell wall","termid":"GO:0099613"}


id: MONDO:0005452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by recurrent episodes of binge-eating over which the individual feels a lack of control; these episodes of binge-eating are followed by recurrent compensatory behavior to prevent weight gain, usually self-induced vomiting. In addition, self-evaluation is unduly influenced by body image.","definition_xrefs":["NCIT:C34440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating disorder","termid":"MONDO:0005451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bulimia nervosa","secondary_identifiers":["EFO:0005204","ICD10CM:F50.2","MESH:D002032","SCTID:78004001","DOID:12129","MESH:D052018","MEDGEN:389218","icd11.foundation:509381842","ICD9:307.51","UMLS:C2267227","NCIT:C97162"],"synonyms":[{"name":"bulimia","type":"exact"},{"name":"hyperorexia nervosa","type":"exact"}],"termid":"MONDO:0005452","xrefs":{"Monarch":{"xref_id":"0005452"}}}


id: GO:0032794
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a GTPase activating protein.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GTPase activating protein binding","synonyms":[{"name":"GAP binding","type":"exact"}],"termid":"GO:0032794"}


id: MONDO:0002644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"idiopathic granulomatous myositis","secondary_identifiers":["DOID:3428","Orphanet:206979","UMLS:C1334150","NCIT:C27575","MEDGEN:235204"],"synonyms":[{"name":"granulomatous myositis","type":"related"},{"name":"idiopathic granulomatous myositis","type":"exact"}],"termid":"MONDO:0002644","xrefs":{"Monarch":{"xref_id":"0002644"}}}


id: GO:0061452
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuron whose cell body resides in the retrotrapezoid nucleus.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"part_of","term_name":"retrotrapezoid nucleus development","termid":"GO:0061451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotrapezoid nucleus neuron differentiation","termid":"GO:0061452"}


id: GO:0030737
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-iodophenol + S-adenosyl-L-methionine = 1-iodo-2-methoxybenzene + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:14313","EC:2.1.1.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"iodophenol O-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03746","MetaCyc:IODOPHENOL-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:2-iodophenol O-methyltransferase activity","type":"related"}],"termid":"GO:0030737"}


id: GO:2000686
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of rubidium ion transmembrane transporter activity.","definition_xrefs":["GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of rubidium ion transmembrane transporter activity (obsolete GO:2000686)","synonyms":[{"name":"regulation of Rb+ transmembrane transporter activity","type":"exact"},{"name":"regulation of rubidium cation transmembrane transporter activity","type":"exact"},{"name":"regulation of rubidium transmembrane transporter activity","type":"related"}],"termid":"GO:2000686"}


id: PBO:0082815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved fungal gene linked to DNA repair and proteasome function; putative substrate of cAMP-dependent protein kinase (PKA); green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; YPL260W is not an essential gene; protein abundance increases in response to DNA replication stress","termid":"PBO:0082815"}


id: SO:0000770
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The acceptor region of a two-piece tmRNA that when mature is charged at its 3' end with alanine. The tmRNA gene undergoes circular permutation in some groups of bacteria; processing of the transcripts from such a gene leaves the mature tmRNA in two pieces, base-paired together.","definition_xrefs":["Indiana:kw","doi:10.1093/nar/gkh795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tmRNA_region","termid":"SO:0000847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tmRNA_acceptor_piece","synonyms":[{"name":"tmRNA acceptor piece","type":"exact"}],"termid":"SO:0000770"}


id: PBO:0046642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 23","termid":"PBO:0046642"}


id: GO:1990935
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein involved in the process of removing sections of the primary RNA transcript to form the mature form of the RNA.","definition_xrefs":["PMID:11118435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"splicing factor binding","termid":"GO:1990935"}


id: PR:P30316
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P30316"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase delta catalytic subunit (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.04","synonyms":[{"name":"DNA polymerase III (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cdc6","type":"exact"}],"termid":"PR:P30316"}


id: PBO:0043444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 4","termid":"PBO:0043444"}


id: PBO:0069442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 707, pseudogene","termid":"PBO:0069442"}


id: GO:0015044
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced [rubredoxin] + NAD+ + H+ = 2 oxidized [rubredoxin] + NADH.","definition_xrefs":["RHEA:18597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rubredoxin-NAD(P)H reductase activity","termid":"GO:0015045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"rubredoxin-NAD+ reductase activity","secondary_identifiers":["MetaCyc:RUBREDOXIN--NAD+-REDUCTASE-RXN","EC:1.18.1.1"],"synonyms":[{"name":"DPNH-rubredoxin reductase activity","type":"related"},{"name":"NADH--rubredoxin oxidoreductase activity","type":"related"},{"name":"NADH--rubredoxin reductase activity","type":"related"},{"name":"NADH:rubredoxin oxidoreductase activity","type":"related"},{"name":"NADH:rubredoxin reductase activity","type":"exact"},{"name":"dihydronicotinamide adenine dinucleotide--rubredoxin reductase activity","type":"related"},{"name":"reduced nicotinamide adenine dinucleotide--rubredoxin reductase activity","type":"related"},{"name":"rubredoxin--NAD reductase activity","type":"related"},{"name":"rubredoxin--nicotinamide adenine dinucleotide reductase activity","type":"related"},{"name":"rubredoxin:NAD+ oxidoreductase activity","type":"related"}],"termid":"GO:0015044"}


id: FYPO:0004821
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates at or near highly transcribed protein-coding genes is lower than normal.","definition_xrefs":["PomBase:mah","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased number of Rad52 foci during vegetative growth","termid":"FYPO:0004516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased number of Rad52 foci at highly transcribed protein-coding genes","synonyms":[{"name":"decreased number of Rad22 foci at highly transcribed protein-coding genes","type":"exact"},{"name":"decreased number of Rad52 foci at highly transcribed protein-coding genes during mitotic cell cycle","type":"related"},{"name":"decreased number of Rad52 foci at highly transcribed protein-coding genes during vegetative growth","type":"related"},{"name":"reduced number of Rad52 foci at highly transcribed protein-coding genes","type":"exact"}],"termid":"FYPO:0004821"}


id: MONDO:0017202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute form of endophthalmitis.","definition_xrefs":["MONDO:patterns/acute"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purulent endophthalmitis","termid":"MONDO:0004863"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute endophthalmitis","secondary_identifiers":["MedDRA:10000730","MEDGEN:509652","SCTID:1493002","UMLS:C0154773","DOID:11752","ICD9:360.01","GARD:21059","Orphanet:279888"],"synonyms":[{"name":"endophthalmitis, acute","type":"exact"}],"termid":"MONDO:0017202","xrefs":{"Monarch":{"xref_id":"0017202"}}}


id: GO:0016264
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Assembly of gap junctions, which are found in most animal tissues, and serve as direct connections between the cytoplasms of adjacent cells. They provide open channels through the plasma membrane, allowing ions and small molecules (less than approximately a thousand daltons) to diffuse freely between neighboring cells, but preventing the passage of proteins and nucleic acids.","definition_xrefs":["ISBN:0716731363","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"gap junction assembly","secondary_identifiers":["Reactome:R-HSA-190861"],"termid":"GO:0016264"}


id: GO:1902707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of hexose to ethanol.","definition_xrefs":["PMID:18727018","GO_REF:0000093","GOC:TermGenie","GOC:mengo_curators","PMID:19539744"],"gene_count":0,"genotype_count":0,"name":"obsolete hexose catabolic process to ethanol (obsolete GO:1902707)","synonyms":[{"name":"hexose breakdown to ethanol","type":"exact"},{"name":"hexose catabolism to ethanol","type":"exact"},{"name":"hexose degradation to ethanol","type":"exact"},{"name":"solventogenesis","type":"broad"}],"termid":"GO:1902707"}


id: PATO:0002041
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A diameter that is along the anterior-posterior axis.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diameter","termid":"PATO:0001334"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior-posterior diameter","termid":"PATO:0002041"}


id: GO:0033399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving cis-zeatin, (2Z)-2-methyl-4-(9H-purin-6-ylamino)but-2-en-1-ol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zeatin metabolic process","termid":"GO:0033397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cis-zeatin metabolic process","synonyms":[{"name":"cis-zeatin metabolism","type":"exact"}],"termid":"GO:0033399"}


id: GO:0030021
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A constituent of the extracellular matrix that enables the matrix to resist compressive forces; often a proteoglycan.","definition_xrefs":["ISBN:0815316194","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular matrix structural constituent","termid":"GO:0005201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"extracellular matrix structural constituent conferring compression resistance","synonyms":[{"name":"core extracellular matrix","type":"broad"},{"name":"core matrisome","type":"broad"}],"termid":"GO:0030021"}


id: PBO:0035787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation_during_vegetative_growth","termid":"PBO:0035787"}


id: MONDO:1012322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal paralysis, non-human animal","termid":"MONDO:1011928"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal paralysis, dog","secondary_identifiers":["OMIA:001206-9615"],"termid":"MONDO:1012322","xrefs":{"Monarch":{"xref_id":"1012322"}}}


id: PBO:0052766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 58","termid":"PBO:0052766"}


id: MONDO:0020593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign hair follicle neoplasm with trichoblastic differentiation. It usually presents as a solitary papular lesion It most often presents on the head and neck area, but it may develop in any anatomic site containing hair follicles. Because of its benign nature, treatment usually is not required, provided that the diagnosis has been established with certainty.","definition_xrefs":["NCIT:C27132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign epithelial skin neoplasm","termid":"MONDO:0024666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichoblastoma","secondary_identifiers":["ICDO:8100/0","icd11.foundation:1414797713","MEDGEN:138112","UMLS:C0349658"],"synonyms":[{"name":"Brooke's tumor","type":"exact"},{"name":"Brooke's tumour","type":"exact"},{"name":"trichoblastoma","type":"exact"},{"name":"trichoepithelioma","type":"exact"},{"name":"trichoepithelioma, benign","type":"exact"},{"name":"trichogenic adnexal tumor","type":"exact"},{"name":"trichogenic adnexal tumour","type":"exact"},{"name":"trichogenic trichoblastoma","type":"exact"}],"termid":"MONDO:0020593","xrefs":{"Monarch":{"xref_id":"0020593"}}}


id: GO:0047878
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + erythritol = D-erythritol 4-phosphate + ADP + 2 H+.","definition_xrefs":["EC:2.7.1.27","RHEA:20708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"erythritol kinase activity","secondary_identifiers":["MetaCyc:ERYTHRITOL-KINASE-RXN","KEGG_REACTION:R02430"],"synonyms":[{"name":"ATP:erythritol 4-phosphotransferase activity","type":"related"},{"name":"erythritol kinase (phosphorylating)","type":"related"}],"termid":"GO:0047878"}


id: GO:1903178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of tyrosine 3-monooxygenase activity.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GO_REF:0000059","PMID:19703902","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of tyrosine 3-monooxygenase activity (obsolete GO:1903178)","synonyms":[{"name":"activation of L-tyrosine hydroxylase activity","type":"narrow"},{"name":"activation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"narrow"},{"name":"activation of tyrosine 3-hydroxylase activity","type":"narrow"},{"name":"activation of tyrosine 3-monooxygenase activity","type":"narrow"},{"name":"activation of tyrosine hydroxylase activity","type":"narrow"},{"name":"positive regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"positive regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"positive regulation of TH activity","type":"exact"},{"name":"positive regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"positive regulation of tyrosine hydroxylase activity","type":"exact"},{"name":"stimulation of TH activity","type":"exact"},{"name":"up regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"up regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"up regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"up regulation of tyrosine 3-monooxygenase activity","type":"exact"},{"name":"up regulation of tyrosine hydroxylase activity","type":"exact"},{"name":"up-regulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"up-regulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"up-regulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"up-regulation of tyrosine 3-monooxygenase activity","type":"exact"},{"name":"up-regulation of tyrosine hydroxylase activity","type":"exact"},{"name":"upregulation of L-tyrosine hydroxylase activity","type":"exact"},{"name":"upregulation of L-tyrosine,tetrahydrobiopterin:oxygen oxidoreductase (3-hydroxylating)","type":"exact"},{"name":"upregulation of tyrosine 3-hydroxylase activity","type":"exact"},{"name":"upregulation of tyrosine 3-monooxygenase activity","type":"exact"},{"name":"upregulation of tyrosine hydroxylase activity","type":"exact"}],"termid":"GO:1903178"}


id: PBO:0041974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 15","termid":"PBO:0041974"}


id: PR:000050401
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-78, MOD:00047.","definition_xrefs":["PomBase:VW","PRO:DAN","PMID:23333317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body-associated protein cut12 phosphorylated 3 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"Spom-cut12/Phos:3","type":"exact"},{"name":"UniProtKB:O59755, Thr-78, MOD:00047","type":"narrow"}],"termid":"PR:000050401"}


id: PBO:0084166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly conserved subunit of mitochondrial pyruvate carrier (MPC); MPC is a mitochondrial inner membrane complex that mediates pyruvate uptake and comprises Mpc1p and Mpc2p during fermentative growth, or Mcp1p and Mpc3p during respiratory growth; null mutant displays slow growth that is complemented by expression of human or mouse ortholog; mutation in human ortholog MPC1 is associated with lactic acidosis and hyperpyruvatemia","termid":"PBO:0084166"}


id: PBO:0005700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak3","termid":"PBO:0005700"}


id: PBO:0040738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCR pseudogene 4","termid":"PBO:0040738"}


id: PBO:0055095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2513","termid":"PBO:0055095"}


id: PR:C6Y4C5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ecl2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:C6Y4C5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extender of the chronological lifespan protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.16c","synonyms":[{"name":"Spom972h-ecl2","type":"exact"}],"termid":"PR:C6Y4C5"}


id: MONDO:0005137
data:
  {"annotated_genes":["SJAG_04459","SJAG_01199","SJAG_04042","SJAG_01881","SJAG_04425","SJAG_04398","SJAG_05230","SJAG_03069","SJAG_00857","SJAG_04980"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014352"},{"annotations":[89026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[88260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009666"},{"annotations":[87527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0006065"},{"annotations":[87226,87227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[87183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010961"},{"annotations":[87475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"Any condition related to a disturbance between proper intake and utilization of nourishment.","definition_xrefs":["NCIT:C26836"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"excluded_subClassOf","term_name":"acquired metabolic disease","termid":"MONDO:0006504"},{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00857":null,"SJAG_01199":null,"SJAG_01881":null,"SJAG_03069":null,"SJAG_04042":null,"SJAG_04398":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04980":null,"SJAG_05230":null},"genotype_count":0,"is_obsolete":false,"name":"nutritional disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:783.9","MEDGEN:811347","DOID:374","MESH:D009748","SCTID:2492009","EFO:0001069","UMLS:C3714509"],"synonyms":[{"name":"nutrition disease","type":"related"},{"name":"nutritional disorder","type":"exact"}],"termid":"MONDO:0005137","terms_by_termid":{"MONDO:0006065":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0009666":null,"MONDO:0010184":null,"MONDO:0010961":null,"MONDO:0012407":null,"MONDO:0014352":null,"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0005137"}}}


id: PBO:0084076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication","termid":"PBO:0084076"}


id: SO:0001034
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A de-branched intron which mimics the structure of pre-miRNA and enters the miRNA processing pathway without Drosha mediated cleavage.","definition_xrefs":["SO:ma","PMID:17589500"],"direct_ancestors":[{"relation_name":"has_part","term_name":"pre_miRNA","termid":"SO:0001244"},{"relation_name":"is_a","term_name":"intron_domain","termid":"SO:0001014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"miRtron","termid":"SO:0001034"}


id: GO:0097556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left posteriolateral basal body and extends cytoplasmically toward the cell posterior, marking the left anterior boundary of the lateral shield and the left lateral region of the funis before exiting at the left lateral region of the cell body.","definition_xrefs":["ISBN:9780124260207","PMID:16607022","GOC:giardia","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left posteriolateral flagellum","synonyms":[{"name":"left posteriolateral cilium","type":"exact"},{"name":"left posterolateral cilium","type":"exact"},{"name":"left posterolateral flagellum","type":"exact"}],"termid":"GO:0097556"}


id: GO:0005302
data:
  {"annotated_genes":["SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81071],"is_not":false,"summary":null,"term":"GO:0005302"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-tyrosine from one side of a membrane to the other. L-tyrosine is 2-amino-3-(4-hydroxyphenyl)propanoic acid.","definition_xrefs":["GOC:mtg_transport","GOC:ai","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"aromatic amino acid transmembrane transporter activity","termid":"GO:0015173"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"L-tyrosine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0015508"],"synonyms":[{"name":"L-tyrosine permease activity","type":"exact"},{"name":"L-tyrosine transporter activity","type":"broad"},{"name":"valine/tyrosine/tryptophan permease activity","type":"related"}],"termid":"GO:0005302","terms_by_termid":{"GO:0005302":null}}


id: GO:0014849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which force is generated within smooth muscle tissue, resulting in a change in muscle geometry. This process occurs in the ureter. Force generation involves a chemo-mechanical energy conversion step that is carried out by the actin/myosin complex activity, which generates force through ATP hydrolysis. The ureter is one of a pair of thick-walled tubes that transports urine from the kidney pelvis to the urinary bladder.","definition_xrefs":["GOC:mtg_muscle","MA:0000378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phasic smooth muscle contraction","termid":"GO:0014821"},{"relation_name":"is_a","term_name":"urinary tract smooth muscle contraction","termid":"GO:0014848"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter smooth muscle contraction","termid":"GO:0014849"}


id: GO:0048058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the corneal lens in the compound eye over time, from its formation to the mature structure. The corneal lens is a chitinous extracellular secretion of the four underlying cone cells and the pigment cells.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"compound eye development","termid":"GO:0048749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens development","termid":"GO:0048058"}


id: PBO:0027729
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-protein_mislocalized_to_mitochondrion","termid":"PBO:0027729"}


id: PBO:0057779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2681","termid":"PBO:0057779"}


id: PBO:0003423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfhydryl oxidase (predicted)","termid":"PBO:0003423"}


id: PBO:0079792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A13, pseudogene","termid":"PBO:0079792"}


id: PBO:0075157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide C pseudogene 13","termid":"PBO:0075157"}


id: PBO:0082384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 4 subunit of the 20S proteasome; localizes to the nucleus throughout the cell cycle","termid":"PBO:0082384"}


id: GO:0102518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: (11Z)-eicosenoyl-CoA + NADH + O2 + H+ = lesqueroloyl-CoA + NAD + H2O.","definition_xrefs":["PMID:8784737","GOC:pz","PMID:9680976"],"gene_count":0,"genotype_count":0,"name":"obsolete (11Z)-eicosenoate 14-hydroxylase activity (obsolete GO:0102518)","termid":"GO:0102518"}


id: GO:1990038
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The periphery of a Lewy body. In Parkinson's disease, it contains spherical accumulations of filaments arranged in a loose, radiating array.","definition_xrefs":["NIF_Subcellular:sao5764355747"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"Lewy body","termid":"GO:0097413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Lewy body corona","synonyms":[{"name":"halo","type":"broad"}],"termid":"GO:1990038"}


id: PBO:0077806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 4","termid":"PBO:0077806"}


id: GO:0046870
data:
  {"annotated_genes":["SJAG_04516"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99375],"is_not":false,"summary":null,"term":"GO:0046870"}]},"cv_name":"molecular_function","definition":"Binding to a cadmium ion (Cd).","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transition metal ion binding","termid":"GO:0046914"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04516":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0046872"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0046872","GO:0003674"],"is_obsolete":false,"name":"cadmium ion binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Cd ion binding","type":"exact"},{"name":"cadmium binding","type":"exact"},{"name":"copper/cadmium binding","type":"broad"}],"termid":"GO:0046870","terms_by_termid":{"GO:0046870":null}}


id: GO:2000093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of mesonephric nephron tubule epithelial cell differentiation.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nephron tubule epithelial cell differentiation","termid":"GO:0072182"},{"relation_name":"regulates","term_name":"mesonephric nephron tubule epithelial cell differentiation","termid":"GO:0061265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of mesonephric nephron tubule epithelial cell differentiation","termid":"GO:2000093"}


id: GO:1990657
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex capable of stimulus-inducible nitric-oxide synthase activity. S-nitrosylates cysteine residues in target proteins, a principal mechanism of nitric oxide (NO)-mediated signal transduction. In mammals consists of NOS2, S100A8 and S100A9. S100A9 acts both as an adaptor linking NOS2 to its target and as a transnitrosylase that transfers the nitric oxide moiety from NOS2 to its target, via its own S-nitrosylated cysteine.","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitric-oxide synthase complex","termid":"GO:1903958"},{"relation_name":"is_a","term_name":"transnitrosylase complex","termid":"GO:1990658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"iNOS-S100A8/A9 complex","termid":"GO:1990657"}


id: PBO:0051218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 7-4-1","termid":"PBO:0051218"}


id: PR:G2TRL0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC922.09 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRL0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C922.09 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC922.09","synonyms":[{"name":"Spom972h-SPAC922.09","type":"exact"}],"termid":"PR:G2TRL0"}


id: GO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that mediates signaling interactions between a bundle of His cardiac muscle cell and a Purkinje myocyte by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell communication by electrical coupling involved in cardiac conduction","termid":"GO:0086064"},{"relation_name":"is_a","term_name":"bundle of His cell to Purkinje myocyte communication","termid":"GO:0086069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bundle of His cell to Purkinje myocyte communication by electrical coupling","synonyms":[{"name":"bundle of His cardiac muscle cell to Purkinje myocyte communication by electrical coupling","type":"exact"}],"termid":"GO:0086054"}


id: PBO:0073193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenoprotein W","termid":"PBO:0073193"}


id: FYPO:0007373
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the methylation of histones in silent mating-type cassettes is abnormal. All histone methylation may be affected, or methylation of specific sites on specific histones may be altered.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone methylation during vegetative growth","termid":"FYPO:0000457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal histone methylation at silent mating-type cassette during vegetative growth","synonyms":[{"name":"abnormal histone methylation at mating-type region heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal histone methylation at silent mating-type cassette during mitotic cell cycle","type":"related"}],"termid":"FYPO:0007373"}


