# terms

id: PBO:0011506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, similar to a region of alpha-galactosidase, melibiase, possible pseudogene","termid":"PBO:0011506"}


id: PBO:0003336
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-polyphosphate 5-phosphatase, synaptojanin homolog 2 (predicted)","termid":"PBO:0003336"}


id: GO:0006726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of eye pigments, any general or particular coloring matter in living organisms, found or utilized in the eye.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eye pigment metabolic process","termid":"GO:0042441"},{"relation_name":"is_a","term_name":"pigment biosynthetic process","termid":"GO:0046148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye pigment biosynthetic process","synonyms":[{"name":"eye pigment anabolism","type":"exact"},{"name":"eye pigment biosynthesis","type":"exact"},{"name":"eye pigment formation","type":"exact"},{"name":"eye pigment synthesis","type":"exact"}],"termid":"GO:0006726"}


id: PBO:0058828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8058","termid":"PBO:0058828"}


id: PBO:0088208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Novel ORF identified by enrichment-based proteomics","termid":"PBO:0088208"}


id: GO:0098922
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the dense core granule membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of organelle membrane","termid":"GO:0031312"},{"relation_name":"part_of","term_name":"dense core granule membrane","termid":"GO:0032127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of dense core granule membrane","termid":"GO:0098922"}


id: FYECO:0000200
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which peptone was added to the medium or assay buffer in excess. Peptone is a mixture of nutrients generated by proteolytic digestion of animal protein with pepsin and serves as a nitrogen and amino acid source in some culture media. Peptone is not normally added to S. pombe growth media.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ peptone","termid":"FYECO:0000200"}


id: FYPO:0007173
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of mitotic checkpoint complex binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PMID:28366744","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased mitotic checkpoint complex binding","synonyms":[{"name":"decreased MCC binding","type":"exact"},{"name":"reduced mitotic checkpoint complex binding","type":"exact"}],"termid":"FYPO:0007173"}


id: GO:0019207
data:
  {"annotated_genes":["SJAG_04020","SJAG_02605","SJAG_00613","SJAG_02785","SJAG_03371","SJAG_03340","SJAG_00100","SJAG_00236","SJAG_01118","SJAG_00333","SJAG_04502","SJAG_03974","SJAG_02232","SJAG_04509","SJAG_03453","SJAG_01210","SJAG_02057","SJAG_05978","SJAG_00296","SJAG_03695","SJAG_00457","SJAG_01605","SJAG_02026","SJAG_03699","SJAG_04200","SJAG_03618","SJAG_04614","SJAG_04140","SJAG_03936","SJAG_00142","SJAG_00424","SJAG_04666","SJAG_05030","SJAG_03090","SJAG_03931","SJAG_00439","SJAG_02699","SJAG_01401","SJAG_02332","SJAG_01213","SJAG_01411","SJAG_01274","SJAG_03802","SJAG_01821","SJAG_00318","SJAG_01245","SJAG_01716","SJAG_02404","SJAG_03525","SJAG_05017","SJAG_01020","SJAG_03591","SJAG_00973"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098744"},{"annotations":[72931],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004862"},{"annotations":[113259,76024,81761,67587,72219,119141,115024,103645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061575"},{"annotations":[110937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004861"},{"annotations":[72143,81062,108291,110402,73460,75827,72500,63176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016538"},{"annotations":[96641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035014"},{"annotations":[109177,118380,101206,72415,113492,72107,74231,80379,114540,74872,93319,91229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030295"},{"annotations":[109047,77865],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004860"},{"annotations":[120466,99762,118204,74521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019887"},{"annotations":[93199,77407,92866,91243,91451,94441,89914,77412,107154,70777,111316,112598,120452],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043539"},{"annotations":[110448,120111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030291"}]},"cv_name":"molecular_function","definition":"Modulates the activity of a kinase, an enzyme which catalyzes of the transfer of a phosphate group, usually from ATP, to a substrate molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme regulator activity","termid":"GO:0030234"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00100":null,"SJAG_00142":null,"SJAG_00236":null,"SJAG_00296":null,"SJAG_00318":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00439":null,"SJAG_00457":null,"SJAG_00613":null,"SJAG_00973":null,"SJAG_01020":null,"SJAG_01118":null,"SJAG_01210":null,"SJAG_01213":null,"SJAG_01245":null,"SJAG_01274":null,"SJAG_01401":null,"SJAG_01411":null,"SJAG_01605":null,"SJAG_01716":null,"SJAG_01821":null,"SJAG_02026":null,"SJAG_02057":null,"SJAG_02232":null,"SJAG_02332":null,"SJAG_02404":null,"SJAG_02605":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_03090":null,"SJAG_03340":null,"SJAG_03371":null,"SJAG_03453":null,"SJAG_03525":null,"SJAG_03591":null,"SJAG_03618":null,"SJAG_03695":null,"SJAG_03699":null,"SJAG_03802":null,"SJAG_03931":null,"SJAG_03936":null,"SJAG_03974":null,"SJAG_04020":null,"SJAG_04140":null,"SJAG_04200":null,"SJAG_04502":null,"SJAG_04509":null,"SJAG_04614":null,"SJAG_04666":null,"SJAG_05017":null,"SJAG_05030":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0098772","GO:0030234"],"is_obsolete":false,"name":"kinase regulator activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0019207","terms_by_termid":{"GO:0004860":null,"GO:0004861":null,"GO:0004862":null,"GO:0016538":null,"GO:0019887":null,"GO:0030291":null,"GO:0030295":null,"GO:0035014":null,"GO:0043539":null,"GO:0061575":null,"GO:0098744":null}}


id: PBO:0063671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piggyBac transposable element derived 3","termid":"PBO:0063671"}


id: GO:0019621
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of creatinine into other compounds, including formate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"creatinine catabolic process","termid":"GO:0006602"},{"relation_name":"is_a","term_name":"formate metabolic process","termid":"GO:0015942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"creatinine catabolic process to formate","secondary_identifiers":["MetaCyc:CRNFORCAT-PWY"],"synonyms":[{"name":"creatinine breakdown to formate","type":"exact"},{"name":"creatinine degradation to formate","type":"exact"}],"termid":"GO:0019621"}


id: MONDO:0015906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disorder with hypergonadotropic hypogonadism (obsolete MONDO:0015906)","secondary_identifiers":["Orphanet:181441"],"synonyms":[{"name":"rare disorder with primary hypogonadism","type":"exact"}],"termid":"MONDO:0015906","xrefs":{"Monarch":{"xref_id":"0015906"}}}


id: PBO:0114109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set1C complex WDC repeat subunit Swd1","termid":"PBO:0114109"}


id: MONDO:0004527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital granular cell tumor (obsolete MONDO:0004527)","termid":"MONDO:0004527","xrefs":{"Monarch":{"xref_id":"0004527"}}}


id: PBO:0065806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB2B, member RAS oncogene family","termid":"PBO:0065806"}


id: PBO:0000281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XP-G family","termid":"PBO:0000281"}


id: GO:0007593
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of hardening of a chitin-based cuticle.","definition_xrefs":["GOC:dos","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"},{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"},{"relation_name":"is_a","term_name":"molting cycle process","termid":"GO:0022404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chitin-based cuticle sclerotization","secondary_identifiers":["GO:0045452"],"synonyms":[{"name":"chitin-based cuticle tanning","type":"related"},{"name":"cuticle hardening","type":"narrow"}],"termid":"GO:0007593"}


id: PBO:0055033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2448","termid":"PBO:0055033"}


id: FYPO:0002572
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dTTP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular dTTP level","synonyms":[{"name":"decreased cellular dTTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dTTP level during vegetative growth","type":"exact"},{"name":"reduced cellular dTTP level","type":"exact"}],"termid":"FYPO:0002572"}


id: MONDO:0019536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare thrombotic microangiopathy characterized by mechanical hemolytic anemia, thrombocytopenia, and renal dysfunction that is usually associated with prodromal enteritis caused by Shigella dysentriae type 1 or E. Coli.","definition_xrefs":["Orphanet:90038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"},{"relation_name":"is_a","term_name":"infection-related hemolytic uremic syndrome","termid":"MONDO:0034103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"Shiga toxin-associated hemolytic uremic syndrome","secondary_identifiers":["GARD:6588","NANDO:2200640","UMLS:C1856143","MEDGEN:383843"],"synonyms":[{"name":"D+HUS","type":"exact"},{"name":"D-plus hemolytic uremic syndrome (D+HUS)","type":"related"},{"name":"STEC Hemolytic Uremic Syndrome","type":"exact"},{"name":"Shiga-like toxin-associated HUS","type":"exact"},{"name":"Sxt-HUS","type":"exact"},{"name":"hemolytic-uremic syndrome with diarrhea","type":"exact"},{"name":"hemolytic-uremic syndrome with diarrhoea","type":"exact"},{"name":"typical HUS","type":"exact"},{"name":"typical hemolytic-uremic syndrome","type":"exact"}],"termid":"MONDO:0019536","xrefs":{"Monarch":{"xref_id":"0019536"}}}


id: PBO:0120069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3150","termid":"PBO:0120069"}


id: MONDO:0700041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroblastoma, susceptibility to, 2","secondary_identifiers":["UMLS:C2751682","MEDGEN:416607","OMIM:613013"],"synonyms":[{"name":"NBLST2","type":"exact"},{"name":"neuroblastoma, susceptibility to, type 2","type":"exact"},{"name":"susceptibility to neuroblastoma 2","type":"exact"}],"termid":"MONDO:0700041","xrefs":{"Monarch":{"xref_id":"0700041"}}}


id: PBO:0082819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved NADPH oxidoreductase containing flavin mononucleotide (FMN); homologous to Oye2p with different ligand binding and catalytic properties; has potential roles in oxidative stress response and programmed cell death","termid":"PBO:0082819"}


id: PBO:0034671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_during_mitotic_interphase","termid":"PBO:0034671"}


id: GO:1904877
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of DNA ligase activity.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","GOC:rl","PMID:17389648","GOC:TermGenie","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of DNA ligase activity (obsolete GO:1904877)","synonyms":[{"name":"activation of DNA ligase activity","type":"narrow"},{"name":"up regulation of DNA ligase activity","type":"exact"},{"name":"up-regulation of DNA ligase activity","type":"exact"},{"name":"upregulation of DNA ligase activity","type":"exact"}],"termid":"GO:1904877"}


id: PATO:0000922
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000922 absolute width (obsolete PATO:0000922)","termid":"PATO:0000922"}


id: PBO:0080886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"yrdC N(6)-threonylcarbamoyltransferase domain containing pseudogene 2","termid":"PBO:0080886"}


id: FYPO:0001131
data:
  {"alleles_by_uniquename":{"SJAG_01050:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01050","name":"nur1delta","uniquename":"SJAG_01050:allele-1"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001132"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to heterochromatin is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"},{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin","termid":"FYPO:0004718"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01050":null,"SJAG_01745":null,"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"nur1delta__vps4delta":{"display_name":"nur1delta vps4delta","display_uniquename":"nur1delta__vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01050:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01050","SJAG_03892"],"name":"abnormal protein localization to heterochromatin during vegetative growth","references_by_uniquename":{"PMID:32109380":null},"synonyms":[{"name":"abnormal protein localisation to heterochromatin during vegetative growth","type":"exact"},{"name":"abnormal protein localization to heterochromatin during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001131","terms_by_termid":{"FYPO:0001132":null,"FYPO_EXT:0000001":null}}


id: GO:0036016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-3 stimulus.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-3","termid":"GO:0036015"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-3","synonyms":[{"name":"cellular response to IL-3","type":"exact"}],"termid":"GO:0036016"}


id: PBO:0061851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactomedin 1","termid":"PBO:0061851"}


id: PBO:0044792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 5","termid":"PBO:0044792"}


id: PBO:0056503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding domain protein 5","termid":"PBO:0056503"}


id: GO:0045841
data:
  {"annotated_genes":["SJAG_01679","SJAG_00883","SJAG_01330","SJAG_04999","SJAG_04126","SJAG_02169","SJAG_03126","SJAG_04259","SJAG_03681","SJAG_03353","SJAG_04699","SJAG_04884","SJAG_02336","SJAG_01297","SJAG_02451","SJAG_01082","SJAG_01837"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105908,109264,115842,117961,116329,101602,114016,92730,110292],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[117619,101444,111953,103817,108347,116559],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007094"},{"annotations":[96208],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0140499"},{"annotations":[118737],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0090267"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the cell cycle process in which a cell progresses from metaphase to anaphase during mitosis, triggered by the activation of the anaphase promoting complex by Cdc20/Sleepy homolog which results in the degradation of Securin.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic metaphase/anaphase transition","termid":"GO:0030071"},{"relation_name":"is_a","term_name":"negative regulation of mitotic nuclear division","termid":"GO:0045839"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of metaphase/anaphase transition of cell cycle","termid":"GO:1902100"},{"relation_name":"is_a","term_name":"negative regulation of mitotic sister chromatid separation","termid":"GO:2000816"},{"relation_name":"negatively_regulates","term_name":"metaphase/anaphase transition of mitotic cell cycle","termid":"GO:0007091"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00883":null,"SJAG_01082":null,"SJAG_01297":null,"SJAG_01330":null,"SJAG_01679":null,"SJAG_01837":null,"SJAG_02169":null,"SJAG_02336":null,"SJAG_02451":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03681":null,"SJAG_04126":null,"SJAG_04259":null,"SJAG_04699":null,"SJAG_04884":null,"SJAG_04999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0000070"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0000070","GO:0008150","GO:0044772","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic metaphase/anaphase transition","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"down-regulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"downregulation of mitotic metaphase/anaphase transition","type":"exact"},{"name":"inhibition of mitotic metaphase/anaphase transition","type":"narrow"}],"termid":"GO:0045841","terms_by_termid":{"GO:0007094":null,"GO:0090267":null,"GO:0140499":null,"GO:1902426":null}}


id: PATO:0000971
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000971 absolute permeability (obsolete PATO:0000971)","termid":"PATO:0000971"}


id: PBO:0089936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A variant H2A.Z Pht1","termid":"PBO:0089936"}


id: MONDO:0006325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from the structures of the eye or ocular adnexa.","definition_xrefs":["NCIT:C8562"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"non-cutaneous melanoma","termid":"MONDO:0006320"},{"relation_name":"is_a","term_name":"ocular cancer","termid":"MONDO:0002236"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"ocular melanoma","secondary_identifiers":["DOID:1752","EFO:1000403","MEDGEN:107846","ONCOTREE:OM","UMLS:C0558356"],"synonyms":[{"name":"OM","type":"related"},{"name":"eye melanoma","type":"exact"},{"name":"eye melanoma (disease)","type":"exact"},{"name":"eyeball of camera-type eye melanoma","type":"exact"},{"name":"eyeball of camera-type eye melanoma (disease)","type":"exact"},{"name":"melanoma (disease) of eyeball of camera-type eye","type":"exact"},{"name":"melanoma of eye","type":"exact"},{"name":"melanoma of the eye","type":"exact"},{"name":"ocular melanoma","type":"exact"}],"termid":"MONDO:0006325","xrefs":{"Monarch":{"xref_id":"0006325"}}}


id: FYPO:0006354
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal when the cell is subject to glucose starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0006551","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"abnormal transcription during glucose starvation","synonyms":[{"name":"abnormal transcription during cellular response to glucose starvation","type":"exact"},{"name":"abnormal transcription during glucose depletion","type":"exact"},{"name":"abnormal transcription during glucose deprivation","type":"exact"},{"name":"abnormal transcription during glucose limitation","type":"related"},{"name":"abnormal transcription in response to glucose starvation","type":"exact"}],"termid":"FYPO:0006354"}


id: PATO:0000668
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000668 mass_quantity (obsolete PATO:0000668)","termid":"PATO:0000668"}


id: MONDO:0859565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial atrioventricular septal defect","termid":"MONDO:0020290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrioventricular septal defect","secondary_identifiers":["MEDGEN:501123","OMIM:606215","UMLS:C1389018"],"termid":"MONDO:0859565","xrefs":{"Monarch":{"xref_id":"0859565"}}}


id: GO:0045187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sleep; a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.","definition_xrefs":["GOC:jl","ISBN:0192800981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle","termid":"GO:0042749"},{"relation_name":"regulates","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of circadian sleep/wake cycle, sleep","synonyms":[{"name":"regulation of sleep","type":"exact"}],"termid":"GO:0045187"}


id: PBO:0082924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytochrome c oxidase subunit; required for assembly of the Complex III-Complex IV supercomplex, and for assembly of Cox13p and Rcf2p into cytochrome c oxidase; similar to Rcf2p, and either Rcf1p or Rcf2p is required for late-stage assembly of the Cox12p and Cox13p subunits and for cytochrome c oxidase activity; required for growth under hypoxic conditions; member of the hypoxia induced gene family; C. elegans and human orthologs are functional in yeast","termid":"PBO:0082924"}


id: GO:0097232
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a lamellar body. A lamellar body is a membrane-bounded organelle, specialized for the storage and secretion of various substances (surfactant phospholipids, glycoproteins and acid phosphates) which are arranged in the form of tightly packed, concentric, membrane sheets or lamellae. Has some similar properties to, but is distinct from, a lysosome.","definition_xrefs":["GOC:sl","PMID:11940594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule membrane","termid":"GO:0030667"},{"relation_name":"part_of","term_name":"lamellar body","termid":"GO:0042599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"lamellar body membrane","termid":"GO:0097232"}


id: GO:0007169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a receptor on the surface of the target cell where the receptor possesses tyrosine kinase activity, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:ceb","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme-linked receptor protein signaling pathway","termid":"GO:0007167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"cell surface receptor protein tyrosine kinase signaling pathway","secondary_identifiers":["Reactome:R-HSA-187015"],"synonyms":[{"name":"transmembrane receptor protein serine/threonine kinase signaling pathway","type":"broad"},{"name":"transmembrane receptor protein tyrosine kinase signalling pathway","type":"exact"}],"termid":"GO:0007169"}


id: PBO:0077733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNS1 antisense RNA 1","termid":"PBO:0077733"}


id: PBO:0041744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAMTA1 antisense RNA 1","termid":"PBO:0041744"}


id: GO:0008010
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the chitin-based cuticle of a larva. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of chitin-based cuticle","termid":"GO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of chitin-based larval cuticle","synonyms":[{"name":"structural constituent of larval cuticle","type":"broad"}],"termid":"GO:0008010"}


id: PBO:0049025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 4","termid":"PBO:0049025"}


id: GO:0075194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of symbiont haustorium mother cell formation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of haustorium mother cell formation","termid":"GO:0075193"},{"relation_name":"positively_regulates","term_name":"haustorium mother cell formation","termid":"GO:0075192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of haustorium mother cell formation","synonyms":[{"name":"positive regulation of haustorium mother cell formation on or near host","type":"exact"}],"termid":"GO:0075194"}


id: GO:0044429
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a mitochondrion, a semiautonomous, self replicating organelle that occurs in varying numbers, shapes, and sizes in the cytoplasm of virtually all eukaryotic cells. It is notably the site of tissue respiration.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial part (obsolete GO:0044429)","synonyms":[{"name":"mitochondrial subcomponent","type":"exact"},{"name":"mitochondrion component","type":"exact"}],"termid":"GO:0044429"}


id: PBO:0081741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 671","termid":"PBO:0081741"}


id: MONDO:0044709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear anomaly","termid":"MONDO:0015604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cochleovestibular dysplasia","secondary_identifiers":["Orphanet:502305","GARD:22044","MEDGEN:1818562","UMLS:C5761642"],"termid":"MONDO:0044709","xrefs":{"Monarch":{"xref_id":"0044709"}}}


id: GO:0035156
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a fusion cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed. Fusion cells allow the interconnection of adjacent tracheal metameres during tracheal tube fusion.","definition_xrefs":["PMID:11063940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell type specification, open tracheal system","termid":"GO:0035153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fusion cell fate specification","termid":"GO:0035156"}


id: PBO:0081201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZKSCAN2 divergent transcript","termid":"PBO:0081201"}


id: GO:0099576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates synaptic transmission by regulating a catabolic process occurring at a postsynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein catabolic process","termid":"GO:0042176"},{"relation_name":"is_a","term_name":"postsynaptic modulation of chemical synaptic transmission","termid":"GO:0099170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of protein catabolic process at postsynapse, modulating synaptic transmission","termid":"GO:0099576"}


id: PR:Q9UTG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dad2 gene.","definition_xrefs":["UniProtKB:Q9UTG8","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DASH complex subunit dad2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.07c","synonyms":[{"name":"Spom972h-dad2","type":"exact"},{"name":"high osmolarity sensitivity protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"outer kinetochore protein dad2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTG8"}


id: GO:2000473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of hematopoietic stem cell migration.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"is_a","term_name":"regulation of hematopoietic stem cell migration","termid":"GO:2000471"},{"relation_name":"positively_regulates","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hematopoietic stem cell migration","synonyms":[{"name":"positive regulation of hemopoietic stem cell migration","type":"exact"}],"termid":"GO:2000473"}


id: PBO:0002656
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DiGeorge syndrome","termid":"PBO:0002656"}


id: MONDO:0044225
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete creatine kinase, brain type, ectopic expression of (obsolete MONDO:0044225)","secondary_identifiers":["HGNC:1992"],"synonyms":[{"name":"CKBE","type":"related"},{"name":"creatine KINASE, brain type, ectopic expression OF","type":"related"}],"termid":"MONDO:0044225","xrefs":{"Monarch":{"xref_id":"0044225"}}}


id: MONDO:0009408
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperuricemia, infantile, with abnormal behavior and normal hypoxanthine guanine phosphoribosyltransferase","secondary_identifiers":["OMIM:240000","UMLS:C1855884","MEDGEN:383794","MESH:C565489"],"synonyms":[{"name":"hyperuricemia, infantile, with abnormal behavior and normal hypoxanthine guanine phosphoribosyltransferase","type":"exact"}],"termid":"MONDO:0009408","xrefs":{"Monarch":{"xref_id":"0009408"}}}


id: MONDO:0004455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital mesoblastic nephroma characterized by the presence of interlacing fascicles of fibroblastic cells, low mitotic activity, and collagen formation.","definition_xrefs":["NCIT:C39814"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mesoblastic nephroma","termid":"MONDO:0017043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"classic congenital mesoblastic nephroma","secondary_identifiers":["MEDGEN:273923","UMLS:C1516475","DOID:8083"],"synonyms":[{"name":"classic congenital mesoblastic nephroma","type":"exact"}],"termid":"MONDO:0004455","xrefs":{"Monarch":{"xref_id":"0004455"}}}


id: GO:0006146
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adenine, 6-aminopurine, one of the 5 main bases found in nucleic acids and a component of numerous important derivatives of its corresponding ribonucleoside, adenosine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"},{"relation_name":"is_a","term_name":"adenine metabolic process","termid":"GO:0046083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"adenine catabolic process","synonyms":[{"name":"adenine breakdown","type":"exact"},{"name":"adenine catabolism","type":"exact"},{"name":"adenine degradation","type":"exact"}],"termid":"GO:0006146"}


id: PBO:0052906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 12-3","termid":"PBO:0052906"}


id: MONDO:0017498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital absence of both forearm and hand, unilateral is a rare developmental defect during embryogenesis characterized by a unilateral, transverse absence of the radius and ulna (of varying terminal lengths), as well as all the elements composing the hand. Left or right side may be involved.","definition_xrefs":["Orphanet:295093"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital absence of both forearm and hand","termid":"MONDO:0017443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"congenital absence of both forearm and hand, unilateral","secondary_identifiers":["icd11.foundation:2019491585"],"synonyms":[{"name":"radio-ulnar terminal transverse meromelia, unilateral","type":"exact"}],"termid":"MONDO:0017498","xrefs":{"Monarch":{"xref_id":"0017498"}}}


id: PBO:0040722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL10 antisense RNA 1","termid":"PBO:0040722"}


id: PBO:0110422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript inducer of AURKA lysosomal degradation","termid":"PBO:0110422"}


id: PBO:0081867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 805","termid":"PBO:0081867"}


id: GO:0106392
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Aprotein complex required for the splicing of intron 3 of the cytochrome b (COB) gene. In S. cerevisiae, the complex contains the maturase bI3 (which derives from one of the products of the splicing), the MRS1 cofactor and the intron 4 of the cytochrome b pre-mRNA. The two proteins stimulate the ribozyme activity of the pre-mRNA which autoctalyse a group I intron splicing.","definition_xrefs":["PMID:11773622","GOC:lnp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoribonuclease complex","termid":"GO:1902555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"bI3 intron splicing complex","secondary_identifiers":["Intact:EBI-16426213"],"termid":"GO:0106392"}


id: PBO:0002970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, CCR4-NOT complex subunit Rcd1","termid":"PBO:0002970"}


id: MONDO:1011602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in Chinese hamster.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, Chinese hamster","secondary_identifiers":["OMIA:000284-10029"],"termid":"MONDO:1011602","xrefs":{"Monarch":{"xref_id":"1011602"}}}


id: PBO:0066661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPK2 divergent transcript","termid":"PBO:0066661"}


id: PBO:0054455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1852","termid":"PBO:0054455"}


id: PBO:0041458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 10 open reading frame 82","termid":"PBO:0041458"}


id: GO:0098921
data:
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id: MONDO:0016253
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id: PBO:0070414
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id: GO:0046163
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id: FYPO:0004012
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id: PBO:0071085
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id: PBO:0066092
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id: GO:0031982
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id: PBO:0070215
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id: PBO:0078426
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id: GO:0015577
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id: MONDO:0006265
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the larynx. It is characterized by the presence of small neuroendocrine cells. It metastasizes early and has an aggressive clinical course.","definition_xrefs":["NCIT:C6025"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"},{"relation_name":"is_a","term_name":"laryngeal neuroendocrine neoplasm","termid":"MONDO:0015070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"laryngeal small cell carcinoma","secondary_identifiers":["MEDGEN:233611","UMLS:C1334378","DOID:7144","EFO:1000320"],"synonyms":[{"name":"laryngeal small cell carcinoma","type":"exact"},{"name":"laryngeal throat small cell cancer","type":"exact"},{"name":"larynx small cell carcinoma","type":"exact"},{"name":"small cell carcinoma of larynx","type":"exact"},{"name":"small cell carcinoma of the larynx","type":"exact"}],"termid":"MONDO:0006265","xrefs":{"Monarch":{"xref_id":"0006265"}}}


id: PBO:0034030
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session_accepted_date","termid":"PBO:0034030"}


id: PBO:0036268
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystonia 8","termid":"PBO:0036268"}


id: PBO:0053512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 500","termid":"PBO:0053512"}


id: GO:0016913
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action characteristic of follicle-stimulating hormone (FSH), a gonadotrophic glycoprotein hormone secreted, in mammals, by the anterior pituitary gland. Upon receptor binding, FSH stimulates growth of Graafian follicles in the ovaries in females, and stimulates the epithelium of the seminiferous tubules to increase spermatogenesis.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hormone activity","termid":"GO:0005179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0005515","GO:0140677","GO:0005488"],"is_obsolete":false,"name":"follicle-stimulating hormone activity","synonyms":[{"name":"FSH activity","type":"exact"},{"name":"follicle stimulating hormone activity","type":"exact"},{"name":"follitropin activity","type":"exact"}],"termid":"GO:0016913"}


id: MONDO:0000506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Caroli disease (obsolete MONDO:0000506)","termid":"MONDO:0000506","xrefs":{"Monarch":{"xref_id":"0000506"}}}


id: PBO:0031828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-vacuoles_absent","termid":"PBO:0031828"}


id: GO:0106106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which heat is generated by increasing metabolism in response to cold ambient temperatures in order to maintain a stable core body temperature.","definition_xrefs":["PMID:27876809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"temperature homeostasis","termid":"GO:0001659"},{"relation_name":"is_a","term_name":"adaptive thermogenesis","termid":"GO:1990845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cold-induced thermogenesis","synonyms":[{"name":"CIT","type":"related"}],"termid":"GO:0106106"}


id: GO:0050766
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phagocytosis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of phagocytosis","termid":"GO:0050764"},{"relation_name":"positively_regulates","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phagocytosis","synonyms":[{"name":"activation of phagocytosis","type":"narrow"},{"name":"stimulation of phagocytosis","type":"narrow"},{"name":"up regulation of phagocytosis","type":"exact"},{"name":"up-regulation of phagocytosis","type":"exact"},{"name":"upregulation of phagocytosis","type":"exact"}],"termid":"GO:0050766"}


id: MONDO:0054741
data:
  {"annotated_genes":["SJAG_00513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87079],"is_not":false,"summary":null,"term":"MONDO:0054741"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 34","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:457223","GARD:17799","MEDGEN:1631307","DOID:0111497","OMIM:617872","UMLS:C4693450"],"synonyms":[{"name":"COXPD34","type":"related"},{"name":"combined oxidative phosphorylation deficiency 34","type":"exact"},{"name":"syndromic sensorineural deafness due to COXPD","type":"exact"},{"name":"syndromic sensorineural deafness due to combined oxidative phosphorylation defect","type":"exact"},{"name":"syndromic sensorineural hearing loss due to COXPD","type":"exact"}],"termid":"MONDO:0054741","terms_by_termid":{"MONDO:0054741":null},"xrefs":{"Monarch":{"xref_id":"0054741"}}}


id: GO:0140163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism inhibits or disrupts vasodilation via the action of a venom that suppresses bradykinin-dependent signaling.","definition_xrefs":["PMID:31370142","PMID:21889567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of G protein-coupled receptor signaling pathway","termid":"GO:0044513"},{"relation_name":"is_a","term_name":"venom-mediated perturbation of blood circulation","termid":"GO:0140134"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated suppression of bradykinin-dependent vasodilation","synonyms":[{"name":"venom-mediated vasoconstriction via bradykinin receptor antagonism","type":"related"}],"termid":"GO:0140163"}


id: PBO:0058177
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4472-1","termid":"PBO:0058177"}


id: PBO:0088808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex associated protein Kti12","termid":"PBO:0088808"}


id: GO:1904660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sensory perception of bitter taste.","definition_xrefs":["PMID:1716172","GO_REF:0000058","GOC:TermGenie","GOC:mr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sensory perception","termid":"GO:0051931"},{"relation_name":"regulates","term_name":"sensory perception of bitter taste","termid":"GO:0050913"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sensory perception of bitter taste","synonyms":[{"name":"regulation of bitter taste perception","type":"exact"}],"termid":"GO:1904660"}


id: GO:0035618
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin projection from a root epidermal cell that contains F-actin and tubulin, and a cell wall.","definition_xrefs":["PMID:24982600","PO:0000256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"root hair","termid":"GO:0035618"}


id: PR:Q9URZ5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- vps1 gene.","definition_xrefs":["UniProtKB:Q9URZ5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC767.01c","synonyms":[{"name":"Spom972h-vps1","type":"exact"}],"termid":"PR:Q9URZ5"}


id: GO:0050422
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3alpha(S)-strictosidine + H2O = D-glucose + strictosidine aglycone.","definition_xrefs":["EC:3.2.1.105","RHEA:12917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"strictosidine beta-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R03820","MetaCyc:STRICTOSIDINE-BETA-GLUCOSIDASE-RXN"],"synonyms":[{"name":"strictosidine b-glucosidase activity","type":"exact"},{"name":"strictosidine beta-D-glucohydrolase activity","type":"related"}],"termid":"GO:0050422"}


id: PBO:0073773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 4 member 7","termid":"PBO:0073773"}


id: GO:1901373
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a lipid hydroperoxide into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid transport","termid":"GO:0006869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"lipid hydroperoxide transport","termid":"GO:1901373"}


id: SO:0000928
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to insert a AA dinucleotide.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000928 insert_AA (obsolete SO:0000928)","synonyms":[{"name":"insert AA","type":"exact"}],"termid":"SO:0000928"}


id: PBO:0057291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 509-3","termid":"PBO:0057291"}


id: PR:Q10339
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An exocyst complex component 7 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN","PANTHER:PTHR12542:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component exo70 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.20","secondary_identifiers":["UniProtKB:Q10339"],"synonyms":[{"name":"SPBC106.20","type":"related"},{"name":"Spom972h-EXOC7","type":"exact"}],"termid":"PR:Q10339"}


id: PBO:0072352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 38","termid":"PBO:0072352"}


id: MONDO:0019652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial idiopathic steroid-resistant nephrotic syndrome","termid":"MONDO:0019006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial idiopathic steroid-resistant nephrotic syndrome with diffuse mesangial proliferation","secondary_identifiers":["Orphanet:93214"],"termid":"MONDO:0019652","xrefs":{"Monarch":{"xref_id":"0019652"}}}


id: PBO:0005558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase (predicted)","termid":"PBO:0005558"}


id: GO:0098944
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding a postsynaptic recycling endosome.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic endosome membrane","termid":"GO:0098895"},{"relation_name":"part_of","term_name":"postsynaptic recycling endosome","termid":"GO:0098837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005768","GO:0031410","GO:0005737"],"is_obsolete":false,"name":"postsynaptic recycling endosome membrane","termid":"GO:0098944"}


id: MONDO:0007017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Detachment of the vitreous humor from the retina.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitreous disorder","termid":"MONDO:0004860"},{"relation_name":"is_a","term_name":"inherited vitreoretinopathy","termid":"MONDO:0020246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"vitreous detachment","secondary_identifiers":["EFO:1001238","DOID:9726","MedDRA:10047650","SCTID:53772007","NCIT:C50807","MEDGEN:140839","MESH:D020255","UMLS:C0423361"],"synonyms":[{"name":"detachment Of vitreous","type":"exact"},{"name":"vitreous, detachment Of","type":"exact"}],"termid":"MONDO:0007017","xrefs":{"Monarch":{"xref_id":"0007017"}}}


id: GO:0036235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of glucuronic acid from an acyl-glucuronide.","definition_xrefs":["GOC:vk","PMID:22294686","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete acyl deglucuronidation (obsolete GO:0036235)","termid":"GO:0036235"}


id: MONDO:0008336
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pterygium colli, isolated","secondary_identifiers":["MEDGEN:356780","OMIM:177990","UMLS:C1867442","MESH:C566741"],"synonyms":[{"name":"pterygium colli, isolated","type":"exact"}],"termid":"MONDO:0008336","xrefs":{"Monarch":{"xref_id":"0008336"}}}


id: PBO:0043402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytidine/uridine monophosphate kinase 2","termid":"PBO:0043402"}


id: PBO:0048500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerophosphodiester phosphodiesterase 1","termid":"PBO:0048500"}


id: PBO:0056017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM12 pseudogene 1","termid":"PBO:0056017"}


id: MONDO:0019605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of very rare glomerular diseases, composed of immunotactoid glomerulopathy (ITG) and non-amyloid fibrillary glomerulopathy (non-amyloid FGP), that are characterized by mesangial deposition of monoclonal microtubular or polyclonal fibrillar deposits. Both present clinically with nephrotic range proteinuria, hematuria and renal insufficiency leading to renal failure in many cases. ITG is more likely to manifest with underlying lymphoproliferative disease, hypocomplementemia, dysproteinemia, monoclonal gammopathy or occult cryoglobulinemia. Non-amyloid FGP is 10 times more frequent than ITG.","definition_xrefs":["Orphanet:91137"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"glomerular disorder","termid":"MONDO:0019722"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"immunotactoid or fibrillary glomerulopathy","secondary_identifiers":["MEDGEN:1842578","GARD:12741","UMLS:C5680195"],"synonyms":[{"name":"Immunotactoid or fibrillary glomerulonephritis","type":"exact"},{"name":"fibrillary glomerulonephritis and immunotactoid glomerulopathy","type":"related"}],"termid":"MONDO:0019605","xrefs":{"Monarch":{"xref_id":"0019605"}}}


id: PBO:0087438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit f of the F0 sector of mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis","termid":"PBO:0087438"}


id: PBO:0017665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit MrpS12 (predicted)","termid":"PBO:0017665"}


id: PBO:0040408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP6V1G2-DDX39B readthrough (NMD candidate)","termid":"PBO:0040408"}


id: PBO:0110324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylcholinesterase (Yt blood group)","termid":"PBO:0110324"}


id: PBO:0091565
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kinesin-Like Protein","termid":"PBO:0091565"}


id: MONDO:0001058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gastric fundus cancer (obsolete MONDO:0001058)","termid":"MONDO:0001058","xrefs":{"Monarch":{"xref_id":"0001058"}}}


id: GO:0032088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the activity of the transcription factor NF-kappaB.","definition_xrefs":["GOC:rl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA-binding transcription factor activity","termid":"GO:0043433"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467","GO:0006355"],"is_obsolete":false,"name":"negative regulation of NF-kappaB transcription factor activity","synonyms":[{"name":"NF-kappaB inhibitor","type":"related"},{"name":"inhibition of NF-kappaB transcription factor","type":"exact"}],"termid":"GO:0032088"}


id: MONDO:0031698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic intestinal disease due to fat malabsorption (obsolete MONDO:0031698)","secondary_identifiers":["Orphanet:363306"],"termid":"MONDO:0031698","xrefs":{"Monarch":{"xref_id":"0031698"}}}


id: GO:0015189
data:
  {"annotated_genes":["SJAG_04725","SJAG_04637","SJAG_02029","SJAG_03400","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81074,99367,102382,104821,112077],"is_not":false,"summary":null,"term":"GO:0015189"}]},"cv_name":"molecular_function","definition":"Enables the transfer of L-lysine from one side of a membrane to the other. L-lysine is 2,6-diaminohexanoic acid.","definition_xrefs":["GOC:ai","GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"},{"relation_name":"is_a","term_name":"L-amino acid transmembrane transporter activity","termid":"GO:0015179"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02029":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_04637":null,"SJAG_04725":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"L-lysine transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005293"],"synonyms":[{"name":"L-lysine permease","type":"related"},{"name":"histidine/arginine/lysine/ornithine porter activity","type":"narrow"},{"name":"lysine permease activity","type":"related"}],"termid":"GO:0015189","terms_by_termid":{"GO:0015189":null}}


id: MOD:01463
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an L-methionine alpha amino hydrogen with a methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated methionine","termid":"MOD:00716"},{"relation_name":"is_a","term_name":"alpha-amino methylated residue","termid":"MOD:01460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated methionine","termid":"MOD:01463"}


id: PBO:0060103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 4","termid":"PBO:0060103"}


id: FYPO:0003493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hypothemycin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to hypothemycin","synonyms":[{"name":"resistance to hypothemycin during mitotic cell cycle","type":"related"},{"name":"resistance to hypothemycin during vegetative growth","type":"exact"},{"name":"resistant to hypothemycin","type":"exact"}],"termid":"FYPO:0003493"}


id: MONDO:0031949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic neurovascular malformation (obsolete MONDO:0031949)","secondary_identifiers":["Orphanet:371436"],"termid":"MONDO:0031949","xrefs":{"Monarch":{"xref_id":"0031949"}}}


id: GO:0150038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The secretion of molecules (e.g. neuropeptides, insulin-related peptides or neuromodulators such as serotonin and dopamine) contained within a postsynaptic dense core vesicle by fusion of the granule with the plasma membrane of the postsynapse in response to increased cytosolic calcium levels.","definition_xrefs":["GOC:bc","PMID:19448629","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle-mediated transport in synapse","termid":"GO:0099003"},{"relation_name":"is_a","term_name":"neuronal dense core vesicle exocytosis","termid":"GO:0099011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"postsynaptic dense core vesicle exocytosis","termid":"GO:0150038"}


id: GO:0002332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which immature B cells from the bone marrow become mature B cells in the spleen. Transitional stage B cells are subdivided into transitional one (T1) and transitional two (T2) stages and are short-lived and functionally incompetent.","definition_xrefs":["GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immature B cell differentiation","termid":"GO:0002327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transitional stage B cell differentiation","synonyms":[{"name":"transitional stage B cell development","type":"related"},{"name":"transitional stage B lymphocyte differentiation","type":"exact"},{"name":"transitional stage B-cell differentiation","type":"exact"},{"name":"transitional stage B-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002332"}


id: PBO:0063083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3'-phosphoadenosine 5'-phosphosulfate synthase 2","termid":"PBO:0063083"}


id: PBO:0110383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLHL12 pseudogene 1","termid":"PBO:0110383"}


id: GO:0051873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process mediated by an organism that results in the death of cells in the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"killing of cells of another organism","termid":"GO:0031640"},{"relation_name":"is_a","term_name":"biological process involved in interaction with symbiont","termid":"GO:0051702"},{"relation_name":"is_a","term_name":"defense response to symbiont","termid":"GO:0140546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"killing by host of symbiont cells","secondary_identifiers":["GO:0051852"],"synonyms":[{"name":"disruption by host of symbiont cells","type":"broad"}],"termid":"GO:0051873"}


id: GO:1902036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of hematopoietic stem cell differentiation.","definition_xrefs":["GOC:TermGenie","PMID:23403623"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901532"},{"relation_name":"is_a","term_name":"regulation of stem cell differentiation","termid":"GO:2000736"},{"relation_name":"regulates","term_name":"hematopoietic stem cell differentiation","termid":"GO:0060218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of hematopoietic stem cell differentiation","secondary_identifiers":["Reactome:R-HSA-8939236"],"synonyms":[{"name":"regulation of haematopoietic stem cell differentiation","type":"exact"},{"name":"regulation of haemopoietic stem cell differentiation","type":"exact"},{"name":"regulation of hemopoietic stem cell differentiation","type":"exact"}],"termid":"GO:1902036"}


id: MONDO:0859182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Short stature, Dauber-Argente type","secondary_identifiers":["MEDGEN:1794178","UMLS:C5561968","OMIM:619489"],"termid":"MONDO:0859182","xrefs":{"Monarch":{"xref_id":"0859182"}}}


id: GO:0008074
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses guanylate cyclase activity and is not bound to a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005829"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"guanylate cyclase complex, soluble","termid":"GO:0008074"}


id: MONDO:0001113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"acute myocarditis","termid":"MONDO:0002815"},{"relation_name":"is_a","term_name":"myocarditis","termid":"MONDO:0004496"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Fiedler's myocarditis","secondary_identifiers":["ICD10CM:I40.1","MEDGEN:510047","SCTID:266238009","UMLS:C0155689","DOID:10778","ICD9:422.91"],"synonyms":[{"name":"fiedler myocarditis","type":"exact"},{"name":"idiopathic myocarditis","type":"exact"},{"name":"isolated (Fiedler's) myocarditis","type":"exact"}],"termid":"MONDO:0001113","xrefs":{"Monarch":{"xref_id":"0001113"}}}


id: FYPO:0000002
data:
  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sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and 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1delta","chk1-P470L-P470L-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc15-A-L264P,P442T-amino_acid_mutation-expression-not_assayed_or_wild_type","gap1delta","mid2delta","rip1delta"],"synonyms":[{"name":"fission 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phenotype","type":"exact"}],"termid":"FYPO:0000002","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000006":null,"FYECO:0000102":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000207":null,"FYECO:0000248":null,"FYECO:0000314":null,"FYECO:0000338":null,"FYPO:0000005":null,"FYPO:0000026":null,"FYPO:0000049":null,"FYPO:0000118":null,"FYPO:0000124":null,"FYPO:0000198":null,"FYPO:0000231":null,"FYPO:0000324":null,"FYPO:0000356":null,"FYPO:0000579":null,"FYPO:0000590":null,"FYPO:0000595":null,"FYPO:0000596":null,"FYPO:0000618":null,"FYPO:0000619":null,"FYPO:0000644":null,"FYPO:0000648":null,"FYPO:0000671":null,"FYPO:0000729":null,"FYPO:0000731":null,"FYPO:0000747":null,"FYPO:0000815":null,"FYPO:0001007":null,"FYPO:0001012":null,"FYPO:0001038":null,"FYPO:0001122":null,"FYPO:0001132":null,"FYPO:0001327":null,"FYPO:0001369":null,"FYPO:0001370":null,"FYPO:0001375":null,"FYPO:0001440":null,"FYPO:0001489":null,"FYPO:0001556":null,"FYPO:0001784":null,"FYPO:0001838":null,"FYPO:0001877":null,"FYPO:0001956":null,"FYPO:0001971":null,"FYPO:0002026":null,"FYPO:0002033":null,"FYPO:0002227":null,"FYPO:0002380":null,"FYPO:0002678":null,"FYPO:0002680":null,"FYPO:0002870":null,"FYPO:0002998":null,"FYPO:0003315":null,"FYPO:0003657":null,"FYPO:0003727":null,"FYPO:0003738":null,"FYPO:0003751":null,"FYPO:0003779":null,"FYPO:0003780":null,"FYPO:0003946":null,"FYPO:0003973":null,"FYPO:0003976":null,"FYPO:0004105":null,"FYPO:0004165":null,"FYPO:0004205":null,"FYPO:0004293":null,"FYPO:0004295":null,"FYPO:0004318":null,"FYPO:0004573":null,"FYPO:0004683":null,"FYPO:0004695":null,"FYPO:0004718":null,"FYPO:0004890":null,"FYPO:0004982":null,"FYPO:0005503":null,"FYPO:0005957":null,"FYPO:0006054":null,"FYPO:0006433":null,"FYPO:0006545":null,"FYPO:0006557":null,"FYPO:0006616":null,"FYPO:0006945":null,"FYPO:0006989":null,"FYPO:0007073":null,"FYPO:0007177":null,"FYPO:0007363":null,"FYPO:0007701":null,"FYPO:0007770":null,"FYPO:0007771":null,"FYPO:0007772":null,"FYPO:0007773":null,"FYPO:0007774":null,"FYPO:0007775":null,"FYPO:0007776":null,"FYPO:0007777":null,"FYPO:0007778":null,"FYPO:0007779":null,"FYPO:0007780":null,"FYPO:0007782":null,"FYPO:0007783":null,"FYPO:0007789":null,"FYPO:0007801":null,"FYPO:0007824":null,"FYPO:0008029":null,"FYPO:0008031":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null,"FYPO_EXT:0000003":null,"GO:0000815":null}}


id: PBO:0048410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastrin","termid":"PBO:0048410"}


id: PBO:0040695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branched chain keto acid dehydrogenase E1 subunit alpha","termid":"PBO:0040695"}


id: FYPO:0002962
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the Mei2 nuclear dot is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to Mei2 nuclear dot","termid":"FYPO:0002958"},{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to Mei2 nuclear dot","synonyms":[{"name":"abolished protein localization to meiRNA nuclear dot","type":"related"},{"name":"protein localisation to Mei2 nuclear dot abolished","type":"exact"},{"name":"protein localization to Mei2 nuclear dot abolished","type":"exact"}],"termid":"FYPO:0002962"}


id: PBO:0089034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane malate/succinate:proton symporter Mae1","termid":"PBO:0089034"}


id: PBO:0070613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 81","termid":"PBO:0070613"}


id: MONDO:0002076
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008259"}]},"cv_name":"mondo","definition":"Abnormal presence of air in the pleural cavity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleural disorder","termid":"MONDO:0002037"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"pneumothorax","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:19365","ICD9:512.8","NCIT:C38006","SCTID:36118008","UMLS:C0032326","DOID:1673","MESH:D011030","icd11.foundation:1946559257","HP:0002107","ICD10WHO:J93"],"synonyms":[{"name":"pneumothorax","type":"exact"},{"name":"pneumothorax (disease)","type":"exact"}],"termid":"MONDO:0002076","terms_by_termid":{"MONDO:0008259":null},"xrefs":{"Monarch":{"xref_id":"0002076"}}}


id: PBO:0088737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3-H4 chaperone, HIR complex WD repeat subunit, hira family Hip1","termid":"PBO:0088737"}


id: GO:0003756
data:
  {"annotated_genes":["SJAG_00288","SJAG_02301","SJAG_00131","SJAG_04904","SJAG_04046","SJAG_03414"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72158,74739,90624,102792,112027,117919],"is_not":false,"summary":null,"term":"GO:0003756"}]},"cv_name":"molecular_function","definition":"Catalysis of the rearrangement of both intrachain and interchain disulfide bonds in proteins.","definition_xrefs":["Wikipedia:Protein_disulfide-isomerase#Function","GOC:vw","EC:5.3.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing S-S bonds","termid":"GO:0016864"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00131":null,"SJAG_00288":null,"SJAG_02301":null,"SJAG_03414":null,"SJAG_04046":null,"SJAG_04904":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016853","GO:0140096","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"protein disulfide isomerase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0006467","Reactome:R-HSA-8950456","MetaCyc:5.3.4.1-RXN","Reactome:R-HSA-8950183","Reactome:R-HSA-8950113"],"synonyms":[{"name":"S-S rearrangase activity","type":"related"},{"name":"disulphide bond formation","type":"exact"},{"name":"protein cysteine-thiol oxidation","type":"related"},{"name":"protein disulfide-isomerase","type":"exact"},{"name":"protein disulphide isomerase activity","type":"exact"},{"name":"protein thiol-disulfide exchange","type":"exact"},{"name":"protein thiol-disulphide exchange","type":"exact"}],"termid":"GO:0003756","terms_by_termid":{"GO:0003756":null}}


id: GO:0080112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a seed. A seed is a propagating organ formed in the reproductive cycle of a spermatophyte, derived from the ovule and enclosing an embryo.","definition_xrefs":["GOC:dhl","PO:0009010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"seed development","termid":"GO:0048316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"seed growth","termid":"GO:0080112"}


id: GO:0006691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving leukotriene, a pharmacologically active substance derived from a polyunsaturated fatty acid, such as arachidonic acid.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid metabolic process","termid":"GO:0006690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"leukotriene metabolic process","secondary_identifiers":["Reactome:R-HSA-2142691"],"synonyms":[{"name":"leukotriene metabolism","type":"exact"}],"termid":"GO:0006691"}


id: PBO:0073133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC14 like lipid binding 5","termid":"PBO:0073133"}


id: PBO:0058584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6717","termid":"PBO:0058584"}


id: MONDO:0013349
data:
  {"annotated_genes":["SJAG_00747"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89059],"is_not":false,"summary":null,"term":"MONDO:0013349"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by facial dysmorphism (microcephaly, high forehead, low posterior hairline, strabismus), hypotonia, failure to thrive, intractable seizures, developmental delay, persistent vomiting and gastric bleeding. Additional features that may be observed include fat pads anomalies, inverted nipples, and body temperature oscillation. The disease is caused by mutations in the gene ALG11 (13q14.3).","definition_xrefs":["Orphanet:280071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00747":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0024322"],"is_obsolete":false,"name":"ALG11-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:613661","MEDGEN:462263","SCTID:733085004","DOID:0080567","UMLS:C3150913","GARD:12396"],"synonyms":[{"name":"ALG11-CDG","type":"exact"},{"name":"ALG11-CDG (CDG-Ip)","type":"related"},{"name":"ALG11-congenital disorder of glycosylation","type":"exact"},{"name":"CDG syndrome type Ip","type":"exact"},{"name":"CDG-Ip","type":"exact"},{"name":"CDG1P","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ip","type":"exact"},{"name":"congenital disorder of glycosylation type 1p","type":"exact"},{"name":"congenital disorder of glycosylation type Ip","type":"exact"},{"name":"congenital disorder of glycosylation, type Ip","type":"related"}],"termid":"MONDO:0013349","terms_by_termid":{"MONDO:0013349":null},"xrefs":{"Monarch":{"xref_id":"0013349"}}}


id: PBO:0058089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4306","termid":"PBO:0058089"}


id: GO:0019179
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dTDP-4-amino-4,6-dideoxy-D-glucose + 2-oxoglutarate = dTDP-4-dehydro-6-deoxy-D-glucose + L-glutamate.","definition_xrefs":["EC:2.6.1.33"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"dTDP-4-amino-4,6-dideoxy-D-glucose transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.33-RXN","RHEA:19085"],"synonyms":[{"name":"TDP-4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"TDP-4-oxo-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"dTDP-4-amino-4,6-dideoxy-D-glucose aminotransferase activity","type":"exact"},{"name":"dTDP-4-amino-4,6-dideoxy-D-glucose:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-amino-4,6-dideoxyglucose aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-amino-6-deoxyglucose aminotransferase activity","type":"related"},{"name":"thymidine diphospho-4-keto-6-deoxy-D-glucose transaminase activity","type":"related"},{"name":"thymidine diphospho-4-keto-6-deoxy-D-glucose-glutamic transaminase activity","type":"related"}],"termid":"GO:0019179"}


id: GO:0010990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate, frequency, or extent of SMAD protein complex assembly. SMAD protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex that contains SMAD proteins.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of SMAD protein complex assembly (obsolete GO:0010990)","termid":"GO:0010990"}


id: MONDO:0016067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by progressive sensorineural deafness, alopecia and hypogonadism with LH and GH deficiencies. It has been described in three brothers. It resembles Bjrnstad's syndrome that combines irregular pili torti and deafness. It is probably inherited as and autosomal recessive disorder.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Crandall syndrome","secondary_identifiers":["ICD9:704.8","SCTID:278098005","UMLS:C0432348","MEDGEN:96597","Orphanet:202","GARD:1561"],"synonyms":[{"name":"alopecia deafness hypogonadism","type":"related"},{"name":"alopecia-deafness-hypogonadism syndrome","type":"exact"},{"name":"alopecia-sensorineural deafness-hypogonadism syndrome","type":"exact"}],"termid":"MONDO:0016067","xrefs":{"Monarch":{"xref_id":"0016067"}}}


id: PBO:0047996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 2 family member M, pseudogene","termid":"PBO:0047996"}


id: PBO:0082098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7,8-diamino-pelargonic acid aminotransferase (DAPA); catalyzes the second step in the biotin biosynthesis pathway; BIO3 is in a cluster of 3 genes (BIO3, BIO4, and BIO5) that mediate biotin synthesis; BIO3 and BIO4 were acquired by horizontal gene transfer (HGT) from bacteria","termid":"PBO:0082098"}


id: PBO:0060773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B7","termid":"PBO:0060773"}


id: PR:P23880
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sds21 gene.","definition_xrefs":["UniProtKB:P23880","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase PP1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC31H12.05c","synonyms":[{"name":"Spom972h-sds21","type":"exact"},{"name":"suppressor protein SDS21 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P23880"}


id: GO:0044581
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions a resulting in the resulting in the breakdown of butyryl-CoA to form butyrate.","definition_xrefs":["GOC:mengo_curators","PMID:19539744","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyryl-CoA catabolic process","termid":"GO:0044580"},{"relation_name":"is_a","term_name":"butyrate biosynthetic process","termid":"GO:0046358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0006790","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"butyryl-CoA catabolic process to butyrate","synonyms":[{"name":"butyryl-CoA catabolism to butyrate","type":"exact"}],"termid":"GO:0044581"}


id: GO:1905794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a puromycin stimulus.","definition_xrefs":["PMID:25736288","GOC:TermGenie","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to purine-containing compound","termid":"GO:0014074"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to puromycin","synonyms":[{"name":"response to 3'-deoxy-N,N-dimethyl-3'-(O-methyl-L-tyrosinamido)adenosine","type":"exact"}],"termid":"GO:1905794"}


id: PBO:0047565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 16","termid":"PBO:0047565"}


id: PBO:0069886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1175, pseudogene","termid":"PBO:0069886"}


id: PBO:0067844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 146","termid":"PBO:0067844"}


id: PBO:0059650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 16","termid":"PBO:0059650"}


id: MONDO:0015206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature-heart defect-craniofacial anomalies syndrome","secondary_identifiers":["UMLS:C2931050","MESH:C535871","Orphanet:1088","MEDGEN:419321"],"synonyms":[{"name":"Rommen Mueller Sybert syndrome","type":"related"},{"name":"Rommen-Mueller-Sybert syndrome","type":"exact"},{"name":"short stature heart defect and craniofacial anomalies","type":"related"}],"termid":"MONDO:0015206","xrefs":{"Monarch":{"xref_id":"0015206"}}}


id: PBO:0040260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 13","termid":"PBO:0040260"}


id: PBO:0069516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 785, pseudogene","termid":"PBO:0069516"}


id: PBO:0091526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spore wall assembly lipid binding protein Mug56","termid":"PBO:0091526"}


id: PBO:0061990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily BH member 1 pseudogene","termid":"PBO:0061990"}


id: MONDO:0014307
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Dowling-Degos disease in which the cause of the disease is a mutation in the POGLUT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Dowling-Degos disease","termid":"MONDO:0008371"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005093","MONDO:0005066"],"is_obsolete":false,"name":"Dowling-Degos disease 4","secondary_identifiers":["OMIM:615696","GARD:16002","UMLS:C3810313","MEDGEN:816643"],"synonyms":[{"name":"DDD4","type":"related"},{"name":"Dowling-Degos disease 4","type":"exact"},{"name":"Dowling-Degos disease caused by mutation in POGLUT1","type":"exact"},{"name":"Dowling-Degos disease type 4","type":"exact"},{"name":"POGLUT1 Dowling-Degos disease","type":"exact"}],"termid":"MONDO:0014307","xrefs":{"Monarch":{"xref_id":"0014307"}}}


id: PBO:0091469
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli mutY","termid":"PBO:0091469"}


id: MONDO:0007173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial septal defect (ASD) with atrioventricular conduction defects is an extremely rare genetic congenital heart disease characterized by the presence of ASD, mostly of the ostium secundum type, associated with conduction anomalies like atrioventricular block, atrial fibrillation or right bundle branch block.","definition_xrefs":["Orphanet:1479"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septal defect","termid":"MONDO:0006664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial septal defect 7","secondary_identifiers":["GARD:16566","DOID:0110112","OMIM:108900","UMLS:C3276096","MEDGEN:477726"],"synonyms":[{"name":"ASD with or without atrioventricular conduction defects","type":"exact"},{"name":"ASD7","type":"related"},{"name":"NKX2-5 atrial heart septal defect","type":"exact"},{"name":"atrial heart septal defect caused by mutation in NKX2-5","type":"exact"},{"name":"atrial heart septal defect type 7","type":"exact"},{"name":"atrial septal defect 7 with or without atrioventricular conduction defects","type":"related"},{"name":"atrial septal defect 7, with or without AV conduction defects","type":"exact"},{"name":"atrial septal defect-atrioventricular conduction defects syndrome","type":"exact"}],"termid":"MONDO:0007173","xrefs":{"Monarch":{"xref_id":"0007173"}}}


id: PBO:0054657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2063","termid":"PBO:0054657"}


id: MONDO:0007367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"febrile seizures, familial","termid":"MONDO:0000032"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"febrile seizures, familial, 1","secondary_identifiers":["OMIM:121210","MESH:C565162","SCTID:230432008","MEDGEN:338959","DOID:0111307","ICD9:780.39","UMLS:C1852577"],"synonyms":[{"name":"FEB1","type":"exact"},{"name":"convulsions, familial febrile","type":"related"},{"name":"convulsions, familial febrile, 1","type":"related"},{"name":"febrile seizures, familial, 1","type":"exact"}],"termid":"MONDO:0007367","xrefs":{"Monarch":{"xref_id":"0007367"}}}


id: PBO:0041373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 47","termid":"PBO:0041373"}


id: MONDO:0015953
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic central nervous system and retinal vascular disease (obsolete MONDO:0015953)","secondary_identifiers":["Orphanet:183503"],"termid":"MONDO:0015953","xrefs":{"Monarch":{"xref_id":"0015953"}}}


id: MONDO:0002966
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A prolymphocytic leukemia that involves the spleen.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prolymphocytic leukemia","termid":"MONDO:0001023"},{"relation_name":"is_a","term_name":"splenic manifestation of leukemia","termid":"MONDO:0004107"},{"relation_name":"is_a","term_name":"gastrointestinal lymphoma","termid":"MONDO:0004699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"splenic manifestation of prolymphocytic leukemia","secondary_identifiers":["MEDGEN:277663","DOID:4334","NCIT:C7297","UMLS:C1336066"],"synonyms":[{"name":"prolymphocytic leukaemia of spleen","type":"exact"},{"name":"prolymphocytic leukemia of spleen","type":"exact"},{"name":"spleen prolymphocytic leukaemia","type":"exact"},{"name":"spleen prolymphocytic leukemia","type":"exact"},{"name":"splenic manifestation of prolymphocytic leukemia","type":"exact"}],"termid":"MONDO:0002966","xrefs":{"Monarch":{"xref_id":"0002966"}}}


id: PBO:0041571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 20 open reading frame 202","termid":"PBO:0041571"}


id: GO:0072190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the urothelium of the ureter over time, from its formation to the mature structure. The urothelium is an epithelium that makes up the epithelial tube of the ureter.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelium development","termid":"GO:0060429"},{"relation_name":"part_of","term_name":"ureter development","termid":"GO:0072189"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureter urothelium development","synonyms":[{"name":"ureter epithelium development","type":"exact"}],"termid":"GO:0072190"}


id: GO:1901631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of presynaptic membrane organization.","definition_xrefs":["GOC:TermGenie","PMID:22426000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular component organization","termid":"GO:0051130"},{"relation_name":"is_a","term_name":"regulation of presynaptic membrane organization","termid":"GO:1901629"},{"relation_name":"positively_regulates","term_name":"presynaptic membrane organization","termid":"GO:0097090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"regulates","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"positive regulation of presynaptic membrane organization","synonyms":[{"name":"activation of presynaptic membrane organisation","type":"narrow"},{"name":"activation of presynaptic membrane organization","type":"narrow"},{"name":"positive regulation of pre-synaptic membrane organization","type":"exact"},{"name":"positive regulation of presynaptic membrane organisation","type":"exact"},{"name":"up regulation of presynaptic membrane organisation","type":"exact"},{"name":"up regulation of presynaptic membrane organization","type":"exact"},{"name":"up-regulation of presynaptic membrane organisation","type":"exact"},{"name":"up-regulation of presynaptic membrane organization","type":"exact"},{"name":"upregulation of presynaptic membrane organisation","type":"exact"},{"name":"upregulation of presynaptic membrane organization","type":"exact"}],"termid":"GO:1901631"}


id: PBO:0085759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein kinase involved in response to oxidative and osmotic stress; identified as suppressor of S. pombe cell cycle checkpoint mutations; similar to CaM (calmodulin) kinases; RCK2 has a paralog, RCK1, that arose from the whole genome duplication","termid":"PBO:0085759"}


id: MONDO:0017991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory large-vessel vasculitis primarily affecting the aorta and its major branches, but also other large vessels, causing stenosis, occlusion, or aneurysm.","definition_xrefs":["Orphanet:3287"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aortic arch defects","termid":"MONDO:0015236"},{"relation_name":"is_a","term_name":"disorder of pharynx","termid":"MONDO:0020592"},{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Takayasu arteritis","secondary_identifiers":["DOID:2508","NANDO:1200251","NANDO:2200423","ICD9:446.7","MedDRA:10043097","EFO:1001857","MEDGEN:21458","SCTID:239937004","GARD:7730","NCIT:C35062","icd11.foundation:1327645131","ICD10CM:M31.4","UMLS:C0039263","NCIT:C34391","Orphanet:99079","NORD:806","MESH:D013625","OMIM:207600"],"synonyms":[{"name":"Arteritis, Takayasu","type":"exact"},{"name":"TA","type":"related"},{"name":"Takayasu arteritis","type":"exact"},{"name":"Takayasu disease","type":"related"},{"name":"Takayasu's arteritis","type":"exact"},{"name":"Takayasu's disease","type":"exact"},{"name":"Young female arteritis","type":"related"},{"name":"aortic arch arteritis","type":"exact"},{"name":"aortic arch syndrome","type":"exact"},{"name":"cervical aortic arch","type":"exact"},{"name":"idiopathic aortitis","type":"exact"},{"name":"pharyngeal arch artery syndromic disease","type":"exact"},{"name":"pulseless disease","type":"related"}],"termid":"MONDO:0017991","xrefs":{"Monarch":{"xref_id":"0017991"}}}


id: FYPO:0007256
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is begins earlier than normal during prophase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:22438582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle pole body","termid":"FYPO:0002771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000054","FYPO:0000138","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"premature protein localization to meiotic spindle pole body during prophase I","synonyms":[{"name":"advanced protein localization to meiotic spindle pole body during prophase I","type":"exact"},{"name":"premature protein localisation to meiotic spindle pole body during prophase I","type":"exact"},{"name":"premature protein localization to meiotic SPB during prophase I","type":"exact"},{"name":"premature protein localization to meiotic spindle pole body during prophase of first meiotic nuclear division","type":"exact"},{"name":"premature protein localization to spindle pole body during meiotic prophase I","type":"exact"}],"termid":"FYPO:0007256"}


id: PBO:0090638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"antibiotic biosynthesis monooxygenase-like domain","termid":"PBO:0090638"}


id: PBO:0063782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 7","termid":"PBO:0063782"}


id: PR:000005216
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the human CDC5L gene or a 1:1 ortholog thereof.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 5-like protein","synonyms":[{"name":"CDC5L","type":"exact"},{"name":"KIAA0432","type":"related"},{"name":"PCDC5RP","type":"related"},{"name":"cdc5-like protein","type":"exact"},{"name":"pombe cdc5-related protein","type":"exact"}],"termid":"PR:000005216"}


id: PATO:0000687
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000687 relative rate value (obsolete PATO:0000687)","termid":"PATO:0000687"}


id: GO:0001781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a neutrophil, any of the immature or mature forms of a granular leukocyte that in its mature form has a nucleus with three to five lobes connected by slender threads of chromatin, and cytoplasm containing fine inconspicuous granules and stainable by neutral dyes.","definition_xrefs":["PMID:12752675","GOC:mtg_apoptosis","GOC:add","PMID:12960266","CL:0000775"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory cell apoptotic process","termid":"GO:0006925"},{"relation_name":"is_a","term_name":"myeloid cell apoptotic process","termid":"GO:0033028"},{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"},{"relation_name":"part_of","term_name":"neutrophil homeostasis","termid":"GO:0001780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil apoptotic process","synonyms":[{"name":"apoptosis of neutrophils","type":"exact"},{"name":"neutrophil apoptosis","type":"narrow"},{"name":"neutrophil programmed cell death by apoptosis","type":"exact"},{"name":"programmed cell death of neutrophils by apoptosis","type":"exact"},{"name":"programmed cell death, neutrophils","type":"exact"}],"termid":"GO:0001781"}


id: PBO:0083624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin ligase; forms heterodimer with Rad6p to regulate K63 polyubiquitination in response to oxidative stress and to monoubiquinate histone H2B-K123, which is required for the subsequent methylation of histone H3-K4 and H3-K79; required for DSBR, transcription, silencing, and checkpoint control; interacts with RNA-binding protein Npl3p, linking histone ubiquitination to mRNA processing; Bre1p-dependent histone ubiquitination promotes pre-mRNA splicing","termid":"PBO:0083624"}


id: GO:1902624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neutrophil migration.","definition_xrefs":["PMID:1826836","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of leukocyte migration","termid":"GO:0002687"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"positively_regulates","term_name":"neutrophil migration","termid":"GO:1990266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of neutrophil migration","synonyms":[{"name":"activation of neutrophil migration","type":"narrow"},{"name":"up regulation of neutrophil migration","type":"exact"},{"name":"up-regulation of neutrophil migration","type":"exact"},{"name":"upregulation of neutrophil migration","type":"exact"}],"termid":"GO:1902624"}


id: MONDO:0012195
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Distal arthrogryposis type 4 is an inherited developmental defect syndrome characterized by multiple congenital contractures of limbs, without primary neurologic and/or muscle disease that affects limb function, and a mild to severe scoliosis. Intelligence is normal.","definition_xrefs":["Orphanet:65720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis-severe scoliosis syndrome","secondary_identifiers":["OMIM:609128","SCTID:715575001","UMLS:C1836756","DOID:0111610","GARD:16672","MEDGEN:373169","MESH:C563791"],"synonyms":[{"name":"DA4","type":"related"},{"name":"arthrogryposis with Severe scoliosis","type":"related"},{"name":"arthrogryposis, distal, type 2D","type":"related"},{"name":"arthrogryposis, distal, type 4","type":"related"},{"name":"distal arthrogryposis type 4","type":"exact"},{"name":"distal arthrogryposis type IID","type":"exact"}],"termid":"MONDO:0012195","xrefs":{"Monarch":{"xref_id":"0012195"}}}


id: PBO:0083106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase/Ubiquitin ligase; involved in error-free DNA damage tolerance (DDT), replication fork regression during postreplication repair by template switching, and error-prone translesion synthesis; required for UV and MMS-associated unequal sister chromatid exchange (SCE) but not for double-strand break associated unequal SCE; promotes synthesis of free and PCNA-bound polyubiquitin chains by Ubc13p-Mms2p; human homolog HLTF can complement yeast null mutant","termid":"PBO:0083106"}


id: PBO:0045050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLEC1 cilia and flagella associated protein","termid":"PBO:0045050"}


id: GO:0045131
data:
  {"annotated_genes":["SJAG_00249"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[66820],"is_not":false,"summary":null,"term":"GO:0045131"}]},"cv_name":"molecular_function","definition":"Binding to a pre-mRNA branch point sequence, located upstream of the 3' splice site.","definition_xrefs":["PMID:9722632","PMID:11691992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-mRNA binding","termid":"GO:0036002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00249":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pre-mRNA branch point binding","references_by_uniquename":{"GO_REF:0000104":null},"termid":"GO:0045131","terms_by_termid":{"GO:0045131":null}}


id: SO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a located_sequence_feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_attribute","termid":"SO:0000400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_attribute","synonyms":[{"name":"feature attribute","type":"exact"}],"termid":"SO:0000733"}


id: MONDO:0010671
data:
  {"annotated_genes":["SJAG_04631"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87932],"is_not":false,"summary":null,"term":"MONDO:0010671"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"excluded_subClassOf","term_name":"microphthalmia, Lenz type","termid":"MONDO:0018924"},{"relation_name":"excluded_subClassOf","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"},{"relation_name":"is_a","term_name":"NAA10-related syndrome","termid":"MONDO:0100124"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"microphthalmia, syndromic 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:438504004","OMIM:309800","GARD:15304","Orphanet:85275","SCTID:717222003","UMLS:C0796016","MESH:C564457","ICD9:759.89","MESH:C537464","DOID:0111799","MEDGEN:162898"],"synonyms":[{"name":"ANOP1, formerly","type":"exact"},{"name":"Lenz dysplasia","type":"exact"},{"name":"Lenz microphthalmia syndrome","type":"exact"},{"name":"MAA, formerly","type":"exact"},{"name":"MCOPS1","type":"exact"},{"name":"MCOPS4","type":"exact"},{"name":"MCOPS4, formerly","type":"exact"},{"name":"microphthalmia syndromic 4","type":"exact"},{"name":"microphthalmia with ankyloblepharon and intellectual disability","type":"exact"},{"name":"microphthalmia with ankyloblepharon and mental retardation","type":"exact"},{"name":"microphthalmia, syndromic 1","type":"exact"},{"name":"microphthalmia, syndromic 4, formerly","type":"exact"},{"name":"microphthalmia, syndromic type 1","type":"exact"},{"name":"syndromic microphthalmia type 4","type":"exact"}],"termid":"MONDO:0010671","terms_by_termid":{"MONDO:0010671":null},"xrefs":{"Monarch":{"xref_id":"0010671"}}}


id: GO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of male germ cells, resulting in the expansion of a cell population.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ cell proliferation","termid":"GO:0036093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male germ cell proliferation","termid":"GO:0002176"}


id: GO:0045938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the duration or quality of sleep, a readily reversible state of reduced awareness and metabolic activity that occurs periodically in many animals.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of circadian rhythm","termid":"GO:0042753"},{"relation_name":"is_a","term_name":"regulation of circadian sleep/wake cycle, sleep","termid":"GO:0045187"},{"relation_name":"is_a","term_name":"positive regulation of behavior","termid":"GO:0048520"},{"relation_name":"positively_regulates","term_name":"circadian sleep/wake cycle, sleep","termid":"GO:0050802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of circadian sleep/wake cycle, sleep","synonyms":[{"name":"activation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"positive regulation of sleep","type":"exact"},{"name":"stimulation of circadian sleep/wake cycle, sleep","type":"narrow"},{"name":"up regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"up-regulation of circadian sleep/wake cycle, sleep","type":"exact"},{"name":"upregulation of circadian sleep/wake cycle, sleep","type":"exact"}],"termid":"GO:0045938"}


id: PBO:0082202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,2-mannosyltransferase; catalyzes sequential addition of the two terminal alpha 1,2-mannose residues to the Man5GlcNAc2-PP-dolichol intermediate during asparagine-linked glycosylation in the ER","termid":"PBO:0082202"}


id: PBO:0077323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 61","termid":"PBO:0077323"}


id: FYPO:0001544
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of sulfur measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular sulfur level","synonyms":[{"name":"normal cellular sulfur accumulation","type":"related"},{"name":"normal cellular sulfur level during mitotic cell cycle","type":"related"},{"name":"normal cellular sulfur level during vegetative growth","type":"exact"},{"name":"normal cellular sulphur level","type":"exact"}],"termid":"FYPO:0001544"}


id: MONDO:1011563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroaxonal dystrophy that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuroaxonal dystrophy, non-human animal","termid":"MONDO:1011444"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuroaxonal dystrophy, horse","secondary_identifiers":["OMIA:000715-9796"],"termid":"MONDO:1011563","xrefs":{"Monarch":{"xref_id":"1011563"}}}


id: GO:0005635
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id: GO:0070192
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  {"annotated_genes":["SJAG_02606","SJAG_02761","SJAG_02624","SJAG_00646","SJAG_03048","SJAG_03698","SJAG_00794","SJAG_04508","SJAG_01538","SJAG_04950","SJAG_02814","SJAG_01613","SJAG_03685","SJAG_05196","SJAG_04076","SJAG_03680","SJAG_01263","SJAG_00756","SJAG_03287","SJAG_01805","SJAG_01777","SJAG_05260","SJAG_03161","SJAG_04143","SJAG_03092","SJAG_03540","SJAG_00678","SJAG_00727","SJAG_03683","SJAG_05226","SJAG_03989","SJAG_03926","SJAG_00207","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95841,89876],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[80771,109857,113279,112603,89765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007129"},{"annotations":[119128,91604],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030999"},{"annotations":[65777,91774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"},{"annotations":[89403,104835,101941,91775,107133],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032121"},{"annotations":[111183,101234,102401,104450,117985,97326,95808,66951,70394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"},{"annotations":[73734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010032"},{"annotations":[115284,90011,113739],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045144"},{"annotations":[119625,118004,119763,98727],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045141"},{"annotations":[116045],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044821"},{"annotations":[104406],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0062123"}]},"cv_name":"biological_process","definition":"A process of chromosome organization that is involved in a meiotic cell cycle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome organization","termid":"GO:0051276"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":34,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_00727":null,"SJAG_00756":null,"SJAG_00794":null,"SJAG_01263":null,"SJAG_01538":null,"SJAG_01613":null,"SJAG_01777":null,"SJAG_01805":null,"SJAG_02286":null,"SJAG_02606":null,"SJAG_02624":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03048":null,"SJAG_03092":null,"SJAG_03161":null,"SJAG_03287":null,"SJAG_03540":null,"SJAG_03680":null,"SJAG_03683":null,"SJAG_03685":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_03989":null,"SJAG_04076":null,"SJAG_04143":null,"SJAG_04508":null,"SJAG_04950":null,"SJAG_05196":null,"SJAG_05226":null,"SJAG_05260":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"chromosome organization involved in meiotic cell cycle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"chromosome organisation involved in meiosis","type":"exact"},{"name":"meiotic chromosome organization","type":"exact"}],"termid":"GO:0070192","terms_by_termid":{"GO:0007129":null,"GO:0010032":null,"GO:0030999":null,"GO:0032121":null,"GO:0044821":null,"GO:0045141":null,"GO:0045144":null,"GO:0051456":null,"GO:0062123":null,"GO:0070197":null,"GO:1990571":null}}


id: GO:0141071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont subverts a MAPK signal transduction pathway in the host organism by initiating, promoting, or enhancing its activation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:25675415","PMID:24043761","PMID:28166272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated activation of host signal transduction pathway","termid":"GO:0052028"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host MAPK cascade","termid":"GO:0052080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host MAPK cascade","synonyms":[{"name":"activation by symbiont of host MAPK signal transduction pathway","type":"narrow"},{"name":"induction by symbiont of host MAP kinase signal transduction pathway","type":"exact"},{"name":"induction of host MAPK kinase signaling pathway","type":"exact"},{"name":"stimulation by symbiont of host MAPK signal transduction pathway","type":"narrow"},{"name":"symbiont-mediated activation of host MAPK signal transduction pathway","type":"exact"}],"termid":"GO:0141071"}


id: GO:0009474
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete nonaheme cytochrome c (obsolete GO:0009474)","synonyms":[{"name":"nonaheme cytochrome c","type":"exact"}],"termid":"GO:0009474"}


id: PBO:0070945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18a","termid":"PBO:0070945"}


id: PR:P36604
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- bip1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P36604"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"78 kDa glucose-regulated protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.15c","synonyms":[{"name":"BiP (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"GRP-78 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-bip1","type":"exact"},{"name":"immunoglobulin heavy chain-binding protein homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36604"}


id: PBO:0046228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin C pseudogene 21","termid":"PBO:0046228"}


id: PBO:0087877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional regulator; involved in regulation of gluconeogenesis and fermentable carbon utilization; GFP-fusion protein localizes to cytoplasm, nucleus; null mutation affects periodicity of transcriptional and metabolic oscillation; plays role in restricting Ty1 transposition; member of the zinc cluster family of proteins, similar to Rds2p","termid":"PBO:0087877"}


id: PBO:0070669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 40","termid":"PBO:0070669"}


id: PBO:0108688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRAPP I, II and III complex RabGEF subunit Bet3","termid":"PBO:0108688"}


id: PATO:0001521
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a sound wave by virtue of the maximum magnitude (value without regard to sign) of its disturbance.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amplitude","termid":"PATO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sound amplitude","synonyms":[{"name":"loudness","type":"broad"}],"termid":"PATO:0001521"}


id: PBO:0059399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S31 pseudogene 1","termid":"PBO:0059399"}


id: PBO:0113181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Largest subunit of the origin recognition complex; involved in directing DNA replication by binding to replication origins; also involved in transcriptional silencing; exhibits ATPase activity; role in chromatin organization at replication origins, along with chromatin remodellers; ORC1 has a paralog, SIR3, that arose from the whole genome duplication","termid":"PBO:0113181"}


id: GO:2001225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chloride transport.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic anion transport","termid":"GO:0044070"},{"relation_name":"regulates","term_name":"chloride transport","termid":"GO:0006821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of chloride transport","termid":"GO:2001225"}


id: PBO:0084312
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isopentenyl diphosphate:dimethylallyl diphosphate isomerase; catalyzes an essential activation step in the isoprenoid biosynthetic pathway; required for viability; isopentenyl diphosphate:dimethylallyl diphosphate isomerase is also known as IPP isomerase","termid":"PBO:0084312"}


id: GO:0033200
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + 4-diphospho-1D-myo-inositol (1,2,3,5,6)pentakisphosphate = ADP + 4,5-bisdiphosphoinositol-1D-myo-inositol (1,2,3,6)tetrakisphosphate, and ATP + 6-diphospho-1D-myo-inositol (1,2,3,4,5)pentakisphosphate = ADP + 5,6-bisdiphosphoinositol-1D-myo-inositol (1,2,3,4)tetrakisphosphate.","definition_xrefs":["PMID:17412958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphoinositol pentakisphosphate kinase activity","termid":"GO:0000829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"diphosphoinositol pentakisphosphate 5-kinase activity","synonyms":[{"name":"IP7 5-kinase activity","type":"exact"},{"name":"diphosphoinositol-pentakisphosphate 5-kinase activity","type":"exact"},{"name":"inositol heptakisphosphate 5-kinase activity","type":"exact"}],"termid":"GO:0033200"}


id: GO:0050361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tryptophan + O2 = CO2 + H2O + indole-3-acetamide.","definition_xrefs":["RHEA:16165","EC:1.13.12.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases)","termid":"GO:0016703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"tryptophan 2-monooxygenase activity","secondary_identifiers":["KEGG_REACTION:R00679","MetaCyc:TRYPTOPHAN-2-MONOOXYGENASE-RXN"],"synonyms":[{"name":"L-tryptophan:oxygen 2-oxidoreductase (decarboxylating)","type":"related"}],"termid":"GO:0050361"}


id: GO:0046655
data:
  {"annotated_genes":["SJAG_03275","SJAG_00815","SJAG_04156","SJAG_00106","SJAG_02408","SJAG_02225","SJAG_01198","SJAG_01126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73028],"is_not":false,"summary":null,"term":"GO:0046655"},{"annotations":[57453,114470,106813,70852,110387,61507,108112],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving folic acid, pteroylglutamic acid. Folic acid is widely distributed as a member of the vitamin B complex and is essential for the synthesis of purine and pyrimidines.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"folic acid metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196757"],"synonyms":[{"name":"folate metabolic process","type":"exact"},{"name":"folate metabolism","type":"exact"},{"name":"folic acid metabolism","type":"exact"},{"name":"vitamin B9 metabolic process","type":"exact"},{"name":"vitamin B9 metabolism","type":"exact"},{"name":"vitamin M metabolic process","type":"exact"},{"name":"vitamin M metabolism","type":"exact"}],"termid":"GO:0046655","terms_by_termid":{"GO:0046655":null,"GO:0046656":null}}


id: PBO:0004033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Svf1 family protein Svf2","termid":"PBO:0004033"}


id: PBO:0065113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C eta","termid":"PBO:0065113"}


id: MOD:00758
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to O4-(N-acetylamino)glucosyl-L-hydroxyproline.","definition_xrefs":["PubMed:15238247","PubMed:9660787","RESID:AA0390"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acetylaminoglucosylated residue","termid":"MOD:00448"},{"relation_name":"is_a","term_name":"O4-(N-acetylamino)hexosyl-L-hydroxyproline","termid":"MOD:01677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","synonyms":[{"name":"(2S,4R)-4-[2-acetamido-2-deoxy-alpha-D-glucopyranosyloxy]pyrrolidine-2-carboxylic acid","type":"exact"},{"name":"4-(N-acetylglucosaminyloxy)proline","type":"exact"},{"name":"4-[(2-N-acetylamino)-alpha-D-glucopyranosyl]oxyproline","type":"exact"},{"name":"CARBOHYD O-linked (GlcNAc) hydroxyproline","type":"exact"},{"name":"HexNAc","type":"related"},{"name":"O4-(N-acetylamino)glucosyl-L-hydroxyproline","type":"exact"},{"name":"O4-glycosyl-hydroxyproline","type":"exact"},{"name":"O4GlcNAcHyPro","type":"exact"},{"name":"alpha-2-(N-acetylamino)glucopyranosyl-4-hydroxyproline","type":"exact"}],"termid":"MOD:00758"}


id: MONDO:0018334
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic hiccup is a rare movement disorder characterized by involuntary spasmodic contractions of the inspiratory muscles synchronized with larynx closure lasting for more than 48 hours.","definition_xrefs":["Orphanet:396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autonomic nervous system disorder","termid":"MONDO:0001292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic hiccup","secondary_identifiers":["NORD:1242","GARD:6657","icd11.foundation:1300687612","HP:0100247","SCTID:716771000","UMLS:C0744898","MEDGEN:900733"],"synonyms":[{"name":"Hiccups, Chronic","type":"exact"},{"name":"Hiccups, intractable","type":"related"},{"name":"chronic hiccups","type":"related"},{"name":"intractable hiccups","type":"related"},{"name":"intractable singultus","type":"related"},{"name":"persistent hiccups","type":"related"}],"termid":"MONDO:0018334","xrefs":{"Monarch":{"xref_id":"0018334"}}}


id: PBO:0049904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hes family bHLH transcription factor 5","termid":"PBO:0049904"}


id: PBO:0110352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4-CDC7 kinase regulatory subunit","termid":"PBO:0110352"}


id: PR:O94701
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fic1 gene.","definition_xrefs":["UniProtKB:O94701","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ingression protein fic1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC83.18c","synonyms":[{"name":"Spom972h-fic1","type":"exact"},{"name":"cdc15-interacting C2 domain-containing protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94701"}


id: PBO:0077846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin polyglutamylase complex subunit 2","termid":"PBO:0077846"}


id: GO:0072748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a tacrolimus (FK506) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to tacrolimus","termid":"GO:1901327"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to tacrolimus","synonyms":[{"name":"cellular response to FK506","type":"exact"},{"name":"cellular response to tacrolimus hydrate","type":"exact"}],"termid":"GO:0072748"}


id: PBO:0049067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 84","termid":"PBO:0049067"}


id: PBO:0088471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial copper chaperone for cytochrome c oxidase Cox17","termid":"PBO:0088471"}


id: PBO:0043603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collectin subfamily member 12","termid":"PBO:0043603"}


id: PBO:0028985
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_alpha,alpha-trehalase_activity_increase_during_cellular_response_to_heat_stress","termid":"PBO:0028985"}


id: GO:0052320
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates, maintains or increases the frequency, rate or extent of phytoalexin metabolism, the chemical reactions and pathways involving phytoalexins.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phytoalexin metabolic process (obsolete GO:0052320)","synonyms":[{"name":"activation of phytoalexin metabolism","type":"narrow"},{"name":"positive regulation of phytoalexin metabolism","type":"related"},{"name":"stimulation of phytoalexin metabolism","type":"narrow"},{"name":"up regulation of phytoalexin metabolism","type":"exact"},{"name":"up-regulation of phytoalexin metabolism","type":"exact"},{"name":"upregulation of phytoalexin metabolism","type":"exact"}],"termid":"GO:0052320"}


id: PBO:0042279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 homolog B, vacuolar protein trafficking and biogenesis associated","termid":"PBO:0042279"}


id: GO:0005076
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete receptor signaling protein serine/threonine kinase signaling protein activity (obsolete GO:0005076)","synonyms":[{"name":"receptor signaling protein serine/threonine kinase signaling protein activity","type":"exact"},{"name":"receptor signalling protein serine/threonine kinase signalling protein activity","type":"exact"}],"termid":"GO:0005076"}


id: GO:0097179
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains a protease inhibitor and a protease; formation of the complex inhibits protease activity.","definition_xrefs":["PMID:6323392","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidase inhibitor complex","termid":"GO:1904090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protease inhibitor complex","synonyms":[{"name":"peptidase inhibitor complex","type":"broad"}],"termid":"GO:0097179"}


id: GO:0070548
data:
  {"annotated_genes":["SJAG_04728"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004360"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from L-glutamine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04728":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"L-glutamine aminotransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0070548","terms_by_termid":{"GO:0004360":null}}


id: PBO:0116846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational activator Sls1","termid":"PBO:0116846"}


id: PBO:0039146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 3","termid":"PBO:0039146"}


id: MONDO:0006498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A polypoid adenoma that arises from and protrudes into the lumen of the colon. Epithelial dysplasia is always present. According to the architectural pattern it is classified as tubular, tubulovillous, or villous.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colon adenoma","termid":"MONDO:0000527"},{"relation_name":"is_a","term_name":"polyp of colon","termid":"MONDO:0021400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"adenomatous colon polyp","secondary_identifiers":["UMLS:C0850572","MEDGEN:163407","HP:0005227","SCTID:428054006","EFO:1000633","NCIT:C96479"],"synonyms":[{"name":"adenomatous polyp of colon","type":"exact"},{"name":"adenomatous polyp of the colon","type":"exact"},{"name":"colon adenomatous polyp","type":"exact"},{"name":"colonic adenomatous polyp","type":"exact"}],"termid":"MONDO:0006498","xrefs":{"Monarch":{"xref_id":"0006498"}}}


id: GO:1902642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:di","PMID:22562153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of lipid catabolic process","termid":"GO:0050995"},{"relation_name":"is_a","term_name":"regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902641"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","termid":"GO:1902634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","synonyms":[{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"down regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"down-regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"downregulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolic process","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"narrow"},{"name":"inhibition of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"narrow"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate breakdown","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate catabolism","type":"exact"},{"name":"negative regulation of 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate degradation","type":"exact"}],"termid":"GO:1902642"}


id: PBO:0085604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in clathrin-mediated endocytosis; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and the nucleus; YHR097C has a paralog, PAL1, that arose from the whole genome duplication","termid":"PBO:0085604"}


id: GO:0032239
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of nucleobases, nucleosides, nucleotides and nucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of nucleobase-containing compound transport","synonyms":[{"name":"regulation of nucleobase, nucleoside, nucleotide and nucleic acid transport","type":"related"}],"termid":"GO:0032239"}


id: MONDO:0054806
data:
  {"annotated_genes":["SJAG_00768"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87996],"is_not":false,"summary":null,"term":"MONDO:0054806"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00768":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092"],"is_obsolete":false,"name":"microcephaly 23, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4693843","DOID:0051034","MEDGEN:1631589","OMIM:617985","GARD:16280"],"synonyms":[{"name":"MCPH23","type":"related"},{"name":"microcephaly 23, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054806","terms_by_termid":{"MONDO:0054806":null},"xrefs":{"Monarch":{"xref_id":"0054806"}}}


id: MONDO:0000376
data:
  {"annotated_genes":["SJAG_03689","SJAG_03453","SJAG_04114","SJAG_00229"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89347,88793,88794],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008903"},{"annotations":[88331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the respiratory system","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00229":null,"SJAG_03453":null,"SJAG_03689":null,"SJAG_04114":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"respiratory system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:165.8","UMLS:C3164456","ICD9:165.9","MEDGEN:756863","NCIT:C4571","SCTID:449096009","DOID:0050615"],"synonyms":[{"name":"cancer of respiratory system","type":"exact"},{"name":"malignant neoplasm of respiratory system","type":"exact"},{"name":"malignant respiratory system neoplasm","type":"exact"},{"name":"respiratory system cancer","type":"exact"}],"termid":"MONDO:0000376","terms_by_termid":{"MONDO:0008903":null,"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0000376"}}}


id: GO:0033103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which proteins are transferred into the extracellular milieu or directly into host cells by the type VI secretion system. Proteins secreted by this system do not require an N-terminal signal sequence.","definition_xrefs":["PMID:16763151","GOC:mlg","PMID:16432199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein secretion","termid":"GO:0009306"},{"relation_name":"is_a","term_name":"protein transmembrane transport","termid":"GO:0071806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"protein secretion by the type VI secretion system","synonyms":[{"name":"protein secretion by the T6SS","type":"exact"},{"name":"protein secretion by the type VI protein secretion system","type":"exact"},{"name":"type VI protein secretion system","type":"exact"}],"termid":"GO:0033103"}


id: MONDO:0016907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome 8q deletion is a chromosome abnormality that occurs when there is a missing copy of the genetic material located on the long arm (q) of chromosome 8. The severity of the condition and the signs and symptoms depend on the size and location of the deletion and which genes are involved. Features that often occur in people with chromosome 8q deletion include developmental delay, intellectual disability, behavioral problems, and distinctive facial features. Most cases are not inherited, but people can pass the deletion on to their children. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0003770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of chromosome 8","termid":"MONDO:0016873"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 8","secondary_identifiers":["icd11.foundation:653068448","MESH:C537828","GARD:3770","UMLS:C0795828","MEDGEN:208638","Orphanet:262065"],"synonyms":[{"name":"8q deletion","type":"related"},{"name":"8q monosomy","type":"related"},{"name":"chromosome 8q deletion","type":"related"},{"name":"deletion 8q","type":"related"},{"name":"monosomy 8q","type":"related"},{"name":"partial deletion of chromosome 8q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 8","type":"exact"},{"name":"partial monosomy 8q","type":"related"},{"name":"partial monosomy of chromosome 8q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 8","type":"exact"}],"termid":"MONDO:0016907","xrefs":{"Monarch":{"xref_id":"0016907"}}}


id: MONDO:0005453
data:
  {"annotated_genes":["SJAG_02730","SJAG_04781","SJAG_03703","SJAG_02431","SJAG_04901","SJAG_03145","SJAG_03764"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87941,87942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013567"},{"annotations":[87316],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013011"},{"annotations":[88642],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013770"},{"annotations":[88641],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013769"},{"annotations":[88152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013261"},{"annotations":[88153,88154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013262"},{"annotations":[87399,87398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014548"},{"annotations":[87396,87397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014550"},{"annotations":[88693,88692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032915"},{"annotations":[89369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013367"},{"annotations":[88586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008542"}]},"cv_name":"mondo","definition":"A heart disease that is present at birth. Representative examples include atrial septal defect, ventricular septal defect, tetralogy of Fallot, and patent foramen ovale.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"congenital anomaly of cardiovascular system","termid":"MONDO:0024239"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_02730":null,"SJAG_03145":null,"SJAG_03703":null,"SJAG_03764":null,"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:746.84","ICD9:746.9","MEDGEN:57501","NCIT:C95834","UMLS:C0152021","ICD9:746.89","SCTID:13213009","MESH:D006330","EFO:0005207","DOID:1682"],"synonyms":[{"name":"Abnormality, heart","type":"related"},{"name":"abnormalities, heart","type":"related"},{"name":"congenital anomaly of heart","type":"exact"},{"name":"congenital heart defect","type":"exact"},{"name":"congenital heart defects","type":"exact"},{"name":"defect, congenital heart","type":"related"},{"name":"defects, congenital heart","type":"related"},{"name":"heart abnormalities","type":"related"},{"name":"heart abnormality","type":"related"},{"name":"heart defect","type":"exact"},{"name":"heart defect, congenital","type":"related"},{"name":"heart malformation","type":"broad"},{"name":"heart, malformation Of","type":"related"},{"name":"heart-congenital defect","type":"related"}],"termid":"MONDO:0005453","terms_by_termid":{"MONDO:0008542":null,"MONDO:0013011":null,"MONDO:0013261":null,"MONDO:0013262":null,"MONDO:0013367":null,"MONDO:0013567":null,"MONDO:0013769":null,"MONDO:0013770":null,"MONDO:0014548":null,"MONDO:0014550":null,"MONDO:0032915":null},"xrefs":{"Monarch":{"xref_id":"0005453"}}}


id: GO:0061508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of introducing a phosphate group into CDP to produce a CTP.","definition_xrefs":["PMID:7499258"],"gene_count":0,"genotype_count":0,"name":"obsolete CDP phosphorylation (obsolete GO:0061508)","termid":"GO:0061508"}


id: MONDO:0023186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fraser Jequier Chen syndrome","secondary_identifiers":["MESH:C535481","UMLS:C2930912","MEDGEN:419665"],"synonyms":[{"name":"chondrodysplasia, situs inversus totalis, cleft epiglottis and larynx, hexadactyly of hands and feet, pancreatic cystic dysplasia, renal dysplasia/abs","type":"related"}],"termid":"MONDO:0023186","xrefs":{"Monarch":{"xref_id":"0023186"}}}


id: GO:0006314
data:
  {"annotated_genes":["SJAG_MIT07","SJAG_MIT05","SJAG_MIT06"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[121120,121127,121128],"is_not":false,"summary":null,"term":"GO:0006314"}]},"cv_name":"biological_process","definition":"Lateral transfer of an intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron.","definition_xrefs":["PMID:10487208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"}],"gene_count":3,"genes_by_uniquename":{"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006310","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"intron homing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0006314","terms_by_termid":{"GO:0006314":null}}


id: GO:0034495
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the protein storage vacuole membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plant-type vacuole lumen","termid":"GO:0000330"},{"relation_name":"part_of","term_name":"protein storage vacuole","termid":"GO:0000326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005773"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005773"],"is_obsolete":false,"name":"protein storage vacuole lumen","termid":"GO:0034495"}


id: SO:0002241
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 21S_rRNA, which functions as a component of the large subunit of the ribosome in mitochondria.","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0002241 rRNA_21S_gene (obsolete SO:0002241)","synonyms":[{"name":"21S rRNA gene","type":"exact"},{"name":"21S_rRNA_gene","type":"exact"}],"termid":"SO:0002241"}


id: MONDO:0005473
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any condition affecting the anatomic and functional characteristics of the temporomandibular joint.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthropathy","termid":"MONDO:0006816"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"temporomandibular joint disorder","secondary_identifiers":["EFO:0005279","ICD9:524.60","SCTID:41888000","UMLS:C0039494","NCIT:C63709","MESH:D013705","ICD9:524.69","MEDGEN:21092"],"synonyms":[{"name":"TMD","type":"exact"}],"termid":"MONDO:0005473","xrefs":{"Monarch":{"xref_id":"0005473"}}}


id: PATO:0000863
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000863 righting reflex value (obsolete PATO:0000863)","termid":"PATO:0000863"}


id: PBO:0080141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasorin","termid":"PBO:0080141"}


id: PBO:0069566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 838, pseudogene","termid":"PBO:0069566"}


id: MONDO:0019411
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Genochondromatosis is characterized by chondromatosis, typically involving the clavicles, upper end of the humerus, and lower end of the femur. Lesions are bilateral and symmetrical. It has been described four patients from the same family and is transmitted as an autosomal dominant trait. Another disorder, genochondromatosis II, shows strong similarities to genochondromatosis but is characterized by the involvement of the short tubular bones and by normal clavicles. It has been described in one unrelated family. Genochondromatosis II may also be inherited as an autosomal dominant trait. Genochondromatosis has a benign clinical course.","definition_xrefs":["Orphanet:85197"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"genochondromatosis","termid":"MONDO:0007653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"genochondromatosis type 1","secondary_identifiers":["GARD:16741","icd11.foundation:521879469","MEDGEN:1761731","UMLS:C5438970"],"termid":"MONDO:0019411","xrefs":{"Monarch":{"xref_id":"0019411"}}}


id: PBO:0083414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the essential gene RPP0","termid":"PBO:0083414"}


id: PR:O59710
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NADPH:adrenodoxin oxidoreductase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03689","PANTHER:PTHR11938:SF4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH:adrenodoxin oxidoreductase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B8.01c","secondary_identifiers":["UniProtKB:O59710"],"synonyms":[{"name":"AR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-FDXR","type":"exact"},{"name":"adrenodoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ferredoxin reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ferredoxin--NADP(+) reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O59710"}


id: GO:0090560
data:
  {"annotated_genes":["SJAG_04085","SJAG_01058"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[68217,69963],"is_not":false,"summary":null,"term":"GO:0090560"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction S-adenosyl-L-methionine + L-histidine-[translation elongation factor 2] = S-methyl-5-thioadenosine + 2-[(3S)-3-amino-3-carboxypropyl]-L-histidine-[translation elongation factor 2].","definition_xrefs":["RHEA:36783","GOC:pde","PMID:15485916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"2-(3-amino-3-carboxypropyl)histidine synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-11371","Reactome:R-HSA-5358494","EC:2.5.1.108"],"termid":"GO:0090560","terms_by_termid":{"GO:0090560":null}}


id: MONDO:0003405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A germ cell tumor of the central nervous system occurring in adults.","definition_xrefs":["NCIT:C6285"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system germ cell tumor","termid":"MONDO:0003000"},{"relation_name":"is_a","term_name":"adult germ cell tumor","termid":"MONDO:0044878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adult central nervous system germ cell tumor","secondary_identifiers":["MEDGEN:128893","UMLS:C0280796","DOID:5349"],"synonyms":[{"name":"adult CNS germ cell neoplasm","type":"exact"},{"name":"adult CNS germ cell tumor","type":"exact"},{"name":"adult CNS germ cell tumour","type":"exact"},{"name":"adult central nervous system germ cell neoplasm","type":"exact"},{"name":"adult central nervous system germ cell tumor","type":"exact"},{"name":"central nervous system adult germ cell tumor","type":"related"},{"name":"central nervous system adult germ cell tumour","type":"related"},{"name":"central nervous system germ cell tumor","type":"broad"},{"name":"central nervous system germ cell tumor of adults","type":"exact"},{"name":"central nervous system germ cell tumour","type":"broad"},{"name":"central nervous system germ cell tumour of adults","type":"exact"},{"name":"germ cell neoplasm of adult CNS","type":"exact"},{"name":"germ cell neoplasm of adult central nervous system","type":"exact"},{"name":"germ cell neoplasm of the adult CNS","type":"exact"},{"name":"germ cell neoplasm of the adult central nervous system","type":"exact"},{"name":"germ cell tumor of adult CNS","type":"exact"},{"name":"germ cell tumor of adult central nervous system","type":"exact"},{"name":"germ cell tumor of the adult CNS","type":"exact"},{"name":"germ cell tumor of the adult central nervous system","type":"exact"},{"name":"germ cell tumour of adult CNS","type":"exact"},{"name":"germ cell tumour of adult central nervous system","type":"exact"},{"name":"germ cell tumour of the adult CNS","type":"exact"},{"name":"germ cell tumour of the adult central nervous system","type":"exact"}],"termid":"MONDO:0003405","xrefs":{"Monarch":{"xref_id":"0003405"}}}


id: GO:0002063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a chondrocyte over time, from its commitment to its mature state. Chondrocyte development does not include the steps involved in committing a chondroblast to a chondrocyte fate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"chondrocyte differentiation","termid":"GO:0002062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chondrocyte development","termid":"GO:0002063"}


id: PBO:0077289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 30C, pseudogene","termid":"PBO:0077289"}


id: PBO:0057710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1296","termid":"PBO:0057710"}


id: GO:0061939
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that mediates the transfer of information from one cell to another using c-di-GMP as the signal.","definition_xrefs":["PMID:28057864","PMID:22864416"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"c-di-GMP signaling","synonyms":[{"name":"3',5'-cyclic di-GMP signaling","type":"exact"},{"name":"cyclic di-(3':5')-guanosine monophosphate signaling","type":"exact"},{"name":"cyclic di-GMP signaling","type":"exact"},{"name":"cyclic diguanylate signaling","type":"exact"}],"termid":"GO:0061939"}


id: FYPO:0000040
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize methionine, and therefore requires methionine in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"growth auxotrophic for sulfur-containing amino acid","termid":"FYPO:0003355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for methionine","synonyms":[{"name":"growth auxotrophic for methionine during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for methionine during vegetative growth","type":"exact"},{"name":"methionine auxotrophy","type":"exact"}],"termid":"FYPO:0000040"}


id: PBO:0048570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GGCT pseudogene 3","termid":"PBO:0048570"}


id: PBO:0031371
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle","termid":"PBO:0031371"}


id: PBO:0089584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavoprotein pyridine nucleotide cytochrome reductase-like, FAD-binding domain","termid":"PBO:0089584"}


id: PBO:0084305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Iron-sulfur protein subunit of succinate dehydrogenase; the complex couples the oxidation of succinate to the transfer of electrons to ubiquinone as part of the TCA cycle and the mitochondrial respiratory chain; other members are Sdh1p, Sdh3p, and Sdh4p","termid":"PBO:0084305"}


id: MONDO:0032753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic ataxia","termid":"MONDO:0017845"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic ataxia 9, autosomal recessive","secondary_identifiers":["OMIM:618438","MEDGEN:1680026","UMLS:C5193100"],"synonyms":[{"name":"SPASTIC ATAXIA 9, AUTOSOMAL RECESSIVE","type":"related"},{"name":"SPAX9","type":"related"}],"termid":"MONDO:0032753","xrefs":{"Monarch":{"xref_id":"0032753"}}}


id: PBO:0120883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zic family zinc finger 2","termid":"PBO:0120883"}


id: SO:0000786
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000786 reagent_attribute (obsolete SO:0000786)","synonyms":[{"name":"reagent attribute","type":"exact"}],"termid":"SO:0000786"}


id: GO:0051571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the covalent addition of a methyl group to the lysine at position 4 of histone H3.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K4 methylation (obsolete GO:0051571)","synonyms":[{"name":"activation of histone H3-K4 methylation","type":"narrow"},{"name":"stimulation of histone H3-K4 methylation","type":"narrow"},{"name":"up regulation of histone H3-K4 methylation","type":"exact"},{"name":"up-regulation of histone H3-K4 methylation","type":"exact"},{"name":"upregulation of histone H3-K4 methylation","type":"exact"}],"termid":"GO:0051571"}


id: MONDO:0022634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly vertebral fusion","secondary_identifiers":["UMLS:C2931682","MEDGEN:444116","MESH:C537973"],"synonyms":[{"name":"camptodactyly and sacral vertebral fusion","type":"related"},{"name":"camptodactyly and sacral vertebral fusion (subtype)","type":"related"}],"termid":"MONDO:0022634","xrefs":{"Monarch":{"xref_id":"0022634"}}}


id: PBO:0002883
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.52","termid":"PBO:0002883"}


id: PBO:0068733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5A small nuclear 4, pseudogene","termid":"PBO:0068733"}


id: MONDO:0004793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uterine corpus cancer (obsolete MONDO:0004793)","termid":"MONDO:0004793","xrefs":{"Monarch":{"xref_id":"0004793"}}}


id: PBO:0083268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; 85% of ORF overlaps the verified gene SRP54; deletion causes a vacuolar protein sorting defect","termid":"PBO:0083268"}


id: PBO:0058456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5100","termid":"PBO:0058456"}


id: MONDO:0004541
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of testicular seminoma characterized by the presence of seminoma cells arranged in pseudoglandular patterns and few lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular seminoma","termid":"MONDO:0003669"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pseudoglandular variant testicular seminoma","secondary_identifiers":["NCIT:C40958","UMLS:C1515293","DOID:8358","MEDGEN:273633"],"synonyms":[{"name":"testicular seminoma, pseudoglandular variant","type":"exact"}],"termid":"MONDO:0004541","xrefs":{"Monarch":{"xref_id":"0004541"}}}


id: GO:0010113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of systemic acquired resistance.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"regulation of systemic acquired resistance","termid":"GO:0010112"},{"relation_name":"is_a","term_name":"negative regulation of defense response","termid":"GO:0031348"},{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"negatively_regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of systemic acquired resistance","synonyms":[{"name":"down regulation of systemic acquired resistance","type":"exact"},{"name":"down-regulation of systemic acquired resistance","type":"exact"},{"name":"downregulation of systemic acquired resistance","type":"exact"},{"name":"inhibition of systemic acquired resistance","type":"narrow"}],"termid":"GO:0010113"}


id: GO:0000468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in generating the mature 3'-end of an LSU-rRNA derived from a tricistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000463"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0042254","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"generation of mature 3'-end of LSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","synonyms":[{"name":"processing at B2","type":"narrow"}],"termid":"GO:0000468"}


id: PBO:0074777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 3J","termid":"PBO:0074777"}


id: PBO:0081506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 410","termid":"PBO:0081506"}


id: PBO:0043442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 2","termid":"PBO:0043442"}


id: GO:0035968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of sterol import, by regulation of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:dgf","PMID:12077145"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of sterol import by regulation of transcription from RNA polymerase II promoter (obsolete GO:0035968)","synonyms":[{"name":"regulation of sterol import by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of sterol influx by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of sterol influx by regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"regulation of sterol uptake by regulation of transcription from Pol II promoter","type":"exact"},{"name":"regulation of sterol uptake by regulation of transcription from RNA polymerase II promoter","type":"exact"}],"termid":"GO:0035968"}


id: CHEBI:17326
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoside triphosphate","termid":"CHEBI:17326"}


id: MONDO:0035737
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"factor V deficiency","termid":"MONDO:0020586"},{"relation_name":"is_a","term_name":"acquired coagulation factor deficiency","termid":"MONDO:0020599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"acquired factor V deficiency","secondary_identifiers":["NCIT:C131624","UMLS:C4329256","icd11.foundation:99894028","GARD:22408","Orphanet:599490","MEDGEN:1380582"],"termid":"MONDO:0035737","xrefs":{"Monarch":{"xref_id":"0035737"}}}


id: MONDO:0002161
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube carcinosarcoma (obsolete MONDO:0002161)","termid":"MONDO:0002161","xrefs":{"Monarch":{"xref_id":"0002161"}}}


id: MONDO:1011892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal intradural arachnoid cyst, non-human animal","secondary_identifiers":["OMIA:001923"],"termid":"MONDO:1011892","xrefs":{"Monarch":{"xref_id":"1011892"}}}


id: MONDO:0020062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chromosome X structural anomaly (obsolete MONDO:0020062)","secondary_identifiers":["Orphanet:98159"],"termid":"MONDO:0020062","xrefs":{"Monarch":{"xref_id":"0020062"}}}


id: MONDO:0023113
data:
  {"annotated_genes":["SJAG_02748","SJAG_02226","SJAG_02187","SJAG_01620"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[87168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87630,87631],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"Familial colon cancer is a cluster of colon cancer within a family. Most cases of colon cancer occur sporadically in people with little to no family history of the condition. Approximately 3-5% of colon cancer is considered 'hereditary' and is thought to be caused by an inherited predisposition tocolon cancer that is passed down through a family in an autosomal dominant or autosomal recessive manner. In some of these families, the underlying genetic cause is not known; however, many of these cases are caused by changes (mutations) in the APC , MYH , MLH1 , MSH2 , MSH6 , PMS2 , EPCAM , PTEN , STK11 , SMAD4 , BMPR1A , NTHL1 , POLE , and POLD1 genes (which are associated with hereditary cancer syndromes). An additional 10-30% of people diagnosed with colon cancer have a significant family history of the condition but have no identifiable mutation in a gene known to cause a hereditary predisposition to colon cancer. These clusters of colon cancer are likely due to a combination of gene(s) and other shared factors such as environment and lifestyle. High-risk cancer screening and other preventative measures such as prophylactic surgeries are typically recommended in people who have an increased risk for colon cancer based on their personal and/or family histories.","definition_xrefs":["GARD:0008533"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"colorectal cancer","termid":"MONDO:0005575"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"familial colorectal cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:8533"],"synonyms":[{"name":"colorectal cancer, familial","type":"related"},{"name":"hereditary colorectal cancer","type":"exact"}],"termid":"MONDO:0023113","terms_by_termid":{"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0023113"}}}


id: GO:0006061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of sorbitol (D-glucitol), one of the ten stereoisomeric hexitols. It can be derived from glucose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sorbitol metabolic process","termid":"GO:0006060"},{"relation_name":"is_a","term_name":"hexitol biosynthetic process","termid":"GO:0019406"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"sorbitol biosynthetic process","synonyms":[{"name":"sorbitol anabolism","type":"exact"},{"name":"sorbitol biosynthesis","type":"exact"},{"name":"sorbitol formation","type":"exact"},{"name":"sorbitol synthesis","type":"exact"}],"termid":"GO:0006061"}


id: PATO:0001590
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's coinciding spatially, partially or wholly with another entity.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlap with","synonyms":[{"name":"overlap","type":"exact"}],"termid":"PATO:0001590"}


id: PBO:0014305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex (RQC) complex subunit (predicted)","termid":"PBO:0014305"}


id: SO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A promoter element that is not part of the core promoter, but provides the promoter with a specific regulatory region.","definition_xrefs":["PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter_element","termid":"SO:0001659"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_promoter_element","synonyms":[{"name":"regulatory promoter element","type":"related"}],"termid":"SO:0001678"}


id: PBO:0077720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNPO3 pseudogene 1","termid":"PBO:0077720"}


id: GO:1900842
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of helvolic acid biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid biosynthetic process","termid":"GO:0010893"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of helvolic acid biosynthetic process","termid":"GO:1900840"},{"relation_name":"positively_regulates","term_name":"helvolic acid biosynthetic process","termid":"GO:1900812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"positive regulation of helvolic acid biosynthetic process","synonyms":[{"name":"up regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"up-regulation of helvolic acid biosynthetic process","type":"exact"},{"name":"upregulation of helvolic acid biosynthetic process","type":"exact"}],"termid":"GO:1900842"}


id: GO:0015813
data:
  {"annotated_genes":["SJAG_00522","SJAG_03256"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98572],"is_not":false,"summary":null,"term":"GO:0015813"},{"annotations":[105847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090515"}]},"cv_name":"biological_process","definition":"The directed movement of L-glutamate across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["PMID:21307582"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate import","termid":"GO:0051938"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_03256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-glutamate transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0089711"],"synonyms":[{"name":"L-glutamate transport","type":"broad"},{"name":"mitochondrial aspartate/glutamate transport","type":"related"}],"termid":"GO:0015813","terms_by_termid":{"GO:0015813":null,"GO:0090515":null}}


id: PBO:0041087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromodomain and PHD finger containing 3","termid":"PBO:0041087"}


id: GO:0022002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals that stops, prevents or reduces the frequency or rate at which a cell adopts an anterior neural cell fate, initiated by binding of Wnt protein to a receptor on the surface of the target cell.","definition_xrefs":["GOC:tb","GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of anterior neural cell fate commitment of the neural plate by Wnt signaling pathway (obsolete GO:0022002)","synonyms":[{"name":"Wnt receptor signaling involved in down regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"Wnt receptor signaling involved in down-regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"Wnt receptor signaling involved in downregulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"Wnt receptor signaling involved in inhibition of anterior neural cell fate of the neural plate","type":"narrow"},{"name":"Wnt receptor signaling involved in negative regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"Wnt receptor signalling involved in negative regulation of anterior neural cell fate of the neural plate","type":"exact"},{"name":"negative regulation of anterior neural cell fate commitment of the neural plate by Wnt receptor signaling pathway","type":"exact"},{"name":"negative regulation of anterior neural cell fate commitment of the neural plate by Wnt-activated signaling pathway","type":"exact"}],"termid":"GO:0022002"}


id: FYPO:0005628
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of cell separation after cytokinesis is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell separation after cytokinesis","termid":"FYPO:0000164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of cell separation after cytokinesis","synonyms":[{"name":"decreased rate of cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"decreased rate of cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"decreased rate of mitotic cytokinetic cell separation","type":"exact"},{"name":"decreased rate of septum digestion after cytokinesis","type":"exact"},{"name":"reduced rate of cell separation after cytokinesis","type":"exact"}],"termid":"FYPO:0005628"}


id: PATO:0000430
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000430 unique (obsolete PATO:0000430)","termid":"PATO:0000430"}


id: FYPO:0000852
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show decreased sensitivity to a salt stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"resistance to osmotic stress","termid":"FYPO:0000851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"resistance to salt stress","synonyms":[{"name":"increased growth during cellular response to salt stress","type":"exact"},{"name":"increased vegetative cell population growth during cellular response to salt stress","type":"exact"},{"name":"ionic stress resistance: increased","type":"related"},{"name":"resistance to salt stress during mitotic cell cycle","type":"related"},{"name":"resistant to salt stress","type":"exact"},{"name":"resistant to salt stress during vegetative growth","type":"exact"}],"termid":"FYPO:0000852"}


id: MONDO:0971092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"soft and hard cleft palate","secondary_identifiers":["Orphanet:664372"],"termid":"MONDO:0971092","xrefs":{"Monarch":{"xref_id":"0971092"}}}


id: GO:0036277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an anticonvulsant stimulus, a drug used to prevent seizures or reduce their severity.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to anticonvulsant","termid":"GO:0036277"}


id: GO:0016058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Maintenance of the excited state of a photoreceptor cell to produce a steady-state current as a result of signals generated by rhodopsin activation by a photon.","definition_xrefs":["GOC:dph","GOC:tb","GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential in photoreceptor cell","termid":"GO:0016057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of membrane potential in photoreceptor cell by rhodopsin mediated signaling","synonyms":[{"name":"maintenance of rhodopsin mediated signaling","type":"related"},{"name":"maintenance of rhodopsin mediated signalling","type":"exact"}],"termid":"GO:0016058"}


id: PBO:0029918
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_lanosterol_level","termid":"PBO:0029918"}


id: GO:0140670
data:
  {"annotated_genes":["SJAG_04508","SJAG_02606"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72456,112606],"is_not":false,"summary":null,"term":"GO:0140670"}]},"cv_name":"molecular_function","definition":"Facilitating a conformational change to unload a cohesin complex from sister chromatids.","definition_xrefs":["PMID:26687354"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02606":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140097","GO:0003824"],"is_obsolete":false,"name":"cohesin unloader activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"cohesin unloading activity","type":"exact"}],"termid":"GO:0140670","terms_by_termid":{"GO:0140670":null}}


id: GO:1904240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of VCP-NPL4-UFD1 AAA ATPase complex assembly.","definition_xrefs":["GOC:TermGenie","PMID:17000876","GO_REF:0000058","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904239"},{"relation_name":"negatively_regulates","term_name":"VCP-NPL4-UFD1 AAA ATPase complex assembly","termid":"GO:1904210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"negatively_regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","synonyms":[{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"down-regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"down-regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"down-regulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"downregulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"exact"},{"name":"downregulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"downregulation of p97-Ufd1-Npl4 complex formation","type":"exact"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex assembly","type":"narrow"},{"name":"inhibition of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex assembly","type":"narrow"},{"name":"inhibition of p97-Ufd1-Npl4 complex formation","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex assembly","type":"narrow"},{"name":"negative regulation of Cdc48p-Npl4p-Ufd1p AAA ATPase complex formation","type":"narrow"},{"name":"negative regulation of VCP-NPL4-UFD1 AAA ATPase complex formation","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex assembly","type":"exact"},{"name":"negative regulation of p97-Ufd1-Npl4 complex formation","type":"exact"}],"termid":"GO:1904240"}


id: GO:0045278
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A part of the respiratory chain located in the plasma membrane, containing the 13 polypeptide subunits of cytochrome c oxidase, including cytochrome a and cytochrome a3. Catalyzes the oxidation of reduced cytochrome c by dioxygen (O2). Examples of this component are found in bacterial species.","definition_xrefs":["ISBN:0198547684","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane respiratory chain complex IV (obsolete GO:0045278)","synonyms":[{"name":"cytochrome c oxidase complex","type":"broad"},{"name":"respiratory chain complex IV","type":"broad"}],"termid":"GO:0045278"}


id: GO:1901118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cephamycin C.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-lactam antibiotic biosynthetic process","termid":"GO:0030654"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"cephamycin C metabolic process","termid":"GO:1901116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006790"],"is_obsolete":false,"name":"cephamycin C biosynthetic process","synonyms":[{"name":"cephamycin C anabolism","type":"exact"},{"name":"cephamycin C biosynthesis","type":"exact"},{"name":"cephamycin C formation","type":"exact"},{"name":"cephamycin C synthesis","type":"exact"}],"termid":"GO:1901118"}


id: PBO:0012841
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Perlman syndrome","termid":"PBO:0012841"}


id: PBO:0044914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DGAT2 divergent transcript","termid":"PBO:0044914"}


id: PBO:0057489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 607","termid":"PBO:0057489"}


id: PBO:0073856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A5","termid":"PBO:0073856"}


id: GO:0010466
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or reduces the rate of peptidase activity, the hydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of proteolysis","termid":"GO:0045861"},{"relation_name":"is_a","term_name":"negative regulation of hydrolase activity","termid":"GO:0051346"},{"relation_name":"is_a","term_name":"regulation of peptidase activity","termid":"GO:0052547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of peptidase activity","termid":"GO:0010466"}


id: PBO:0081896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 847, pseudogene","termid":"PBO:0081896"}


id: PBO:0075314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 6","termid":"PBO:0075314"}


id: PBO:0001868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit Mrp10 (predicted)","termid":"PBO:0001868"}


id: MONDO:0015545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A complication of rheumatic disease that is caused by excessive activation and uncontrolled proliferation of T lymphocytes and well-differentiated macrophages. It is characterized by fever, pancytopenia, liver insufficiency, coagulopathy and neurologic symptoms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"secondary hemophagocytic lymphohistiocytosis","termid":"MONDO:0015542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"macrophage activation syndrome","secondary_identifiers":["MedDRA:10053867","MESH:D055501","UMLS:C1096155","SCTID:430478003","NCIT:C114471","Orphanet:158061","EFO:1001806","GARD:12124","MEDGEN:242753"],"synonyms":[{"name":"MAS","type":"exact"},{"name":"reactive hemophagocytic lymphohistiocytosis","type":"exact"}],"termid":"MONDO:0015545","xrefs":{"Monarch":{"xref_id":"0015545"}}}


id: PBO:0046194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELN antisense RNA 1","termid":"PBO:0046194"}


id: MONDO:0014921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any early infantile epileptic encephalopathy in which the cause of the disease is a mutation in the GABRB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Lennox-Gastaut syndrome","termid":"MONDO:0016532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 43","secondary_identifiers":["UMLS:C4310712","OMIM:617113","GARD:16192","MEDGEN:934679","DOID:0080447"],"synonyms":[{"name":"DEE43","type":"exact"},{"name":"EIEE43","type":"exact"},{"name":"GABRB3 early infantile epileptic encephalopathy","type":"exact"},{"name":"developmental and epileptic encephalopathy 43","type":"exact"},{"name":"early infantile epileptic encephalopathy caused by mutation in GABRB3","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 43","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 43; EIEE43","type":"exact"},{"name":"epileptic encephalopathy, early infantile, type 43","type":"exact"}],"termid":"MONDO:0014921","xrefs":{"Monarch":{"xref_id":"0014921"}}}


id: GO:0007277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pole cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"gamete generation","termid":"GO:0007276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pole cell development","termid":"GO:0007277"}


id: GO:0019736
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of sarcosine (N-methylglycine) into non-coded peptides.","definition_xrefs":["RESID:AA0063"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-sarcosine incorporation (obsolete GO:0019736)","termid":"GO:0019736"}


id: PBO:0000182
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness","termid":"PBO:0000182"}


id: MONDO:0006079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, cytologically malignant ameloblastoma that may metastasize.","definition_xrefs":["NCIT:C7492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"head and neck carcinoma","termid":"MONDO:0002038"},{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"},{"relation_name":"is_a","term_name":"odontogenic neoplasm","termid":"MONDO:0021192"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"ameloblastic carcinoma","secondary_identifiers":["Orphanet:314422","GARD:11855","EFO:1000078","MEDGEN:231088","NORD:763","UMLS:C1314678"],"synonyms":[{"name":"ameloblastic carcinoma","type":"exact"},{"name":"odontoma, ameloblastic, malignant","type":"exact"}],"termid":"MONDO:0006079","xrefs":{"Monarch":{"xref_id":"0006079"}}}


id: PBO:0060502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein 1 like 4 pseudogene 1","termid":"PBO:0060502"}


id: FYPO:0001241
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing anisomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002058","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on anisomycin","synonyms":[{"name":"normal cell population growth in presence of anisomycin","type":"exact"},{"name":"normal cell population growth on anisomycin","type":"exact"},{"name":"normal cellular response to anisomycin","type":"related"},{"name":"normal vegetative cell population growth on anisomycin","type":"exact"}],"termid":"FYPO:0001241"}


id: MONDO:0010450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 89","secondary_identifiers":["UMLS:C1839082","MEDGEN:333247","DOID:0112031","OMIM:300848","GARD:22688","MESH:C564036"],"synonyms":[{"name":"MRX89","type":"exact"},{"name":"intellectual disability, X-linked 89","type":"exact"},{"name":"mental retardation, X-linked 89","type":"related"},{"name":"mental retardation, X-linked 89, X-linked dominant","type":"exact"}],"termid":"MONDO:0010450","xrefs":{"Monarch":{"xref_id":"0010450"}}}


id: PR:P87059
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial intermembrane space import and assembly protein 40 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR21622:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space import and assembly protein 40 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC57A10.11c","secondary_identifiers":["UniProtKB:P87059"],"synonyms":[{"name":"SPAC57A10.11c","type":"related"},{"name":"Spom972h-CHCHD4","type":"exact"},{"name":"mitochondrial import inner membrane translocase TIM40 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tim40","type":"related"}],"termid":"PR:P87059"}


id: GO:1905176
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of vascular smooth muscle cell dedifferentiation.","definition_xrefs":["PMID:19088079","GOC:rph","GOC:TermGenie","GOC:BHF_miRNA","GOC:BHF","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell dedifferentiation","termid":"GO:1905174"},{"relation_name":"positively_regulates","term_name":"vascular associated smooth muscle cell dedifferentiation","termid":"GO:1990936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of vascular associated smooth muscle cell dedifferentiation","synonyms":[{"name":"activation of vascular smooth muscle cell dedifferentiation","type":"narrow"},{"name":"positive regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"up regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"up-regulation of vascular smooth muscle cell dedifferentiation","type":"exact"},{"name":"upregulation of vascular smooth muscle cell dedifferentiation","type":"exact"}],"termid":"GO:1905176"}


id: FYPO:0000684
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cell growth is decreased relative to normal in a medium containing glycerol as the carbon source.","definition_xrefs":["PomBase:al","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased vegetative cell population growth","termid":"FYPO:0001355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"decreased cell population growth on glycerol carbon source","synonyms":[{"name":"decreased growth on glycerol carbon source","type":"broad"},{"name":"decreased vegetative cell growth on glycerol carbon source","type":"exact"},{"name":"reduced cell growth on glycerol carbon source","type":"exact"},{"name":"slow cell growth on glycerol carbon source","type":"narrow"}],"termid":"FYPO:0000684"}


id: SO:0002042
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding a Y-RNA.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nc_primary_transcript","termid":"SO:0000483"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA_primary_transcript","synonyms":[{"name":"Y-RNA primary transcript","type":"exact"}],"termid":"SO:0002042"}


id: PBO:0054298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1689","termid":"PBO:0054298"}


id: FYPO:0007213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 in one or more heterochromatin islands occurs to a lower extent than normal.","definition_xrefs":["PMID:29214404","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0002494"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at heterochromatin island during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at heterochromatin island during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at heterochromatin island during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at heterochromatin island during vegetative growth","type":"exact"}],"termid":"FYPO:0007213"}


id: MONDO:0008440
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by variable spastic paraplegia, bilateral sensorineural deafness, intellectual deficit and progressive nephropathy.","definition_xrefs":["Orphanet:2820"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"autosomal dominant complex spastic paraplegia","termid":"MONDO:0015087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spastic paraplegia-nephritis-deafness syndrome","secondary_identifiers":["MESH:C537937","MEDGEN:355816","OMIM:182690","GARD:2342","UMLS:C1866853"],"synonyms":[{"name":"Fitzsimmons Walson Mellor syndrome","type":"related"},{"name":"Fitzsimmons-Walson-Mellor syndrome","type":"exact"},{"name":"spastic paraplegia - nephritis - deafness","type":"related"},{"name":"spastic paraplegia, bilateral sensorineural deafness, intellectual retardation, and progressive nephropathy","type":"related"},{"name":"spastic paraplegia, sensorineural deafness, intellectual disability, and progressive nephropathy","type":"related"},{"name":"spastic paraplegia, sensorineural deafness, mental retardation, and progressive nephropathy","type":"related"}],"termid":"MONDO:0008440","xrefs":{"Monarch":{"xref_id":"0008440"}}}


id: MONDO:1011991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vision disorder, non-human animal","termid":"MONDO:1011367"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod dysplasia, non-human animal","secondary_identifiers":["OMIA:001670"],"termid":"MONDO:1011991","xrefs":{"Monarch":{"xref_id":"1011991"}}}


id: FYPO:0005324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the repair of cyclobutane pyrimidine dimers by error-free translesion synthesis occurs to a lower extent than normal.","definition_xrefs":["PMID:20453833","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal error-free translesion synthesis","termid":"FYPO:0005323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000293"],"is_obsolete":false,"name":"decreased error-free translesion synthesis of cyclobutane pyrimidine dimers","synonyms":[{"name":"decreased error-free translesion synthesis across TT-CPD","type":"exact"},{"name":"decreased error-free translesion synthesis of cyclobutane pyrimidine dimers during mitotic cell cycle","type":"related"},{"name":"decreased error-free translesion synthesis of cyclobutane pyrimidine dimers during vegetative growth","type":"exact"}],"termid":"FYPO:0005324"}


id: FYPO:0005582
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell contains monoacylglycerol phosphates (also called lysophospholipids) that have normal length fatty acid chain residues.","definition_xrefs":["PomBase:mah","PMID:27053105"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative phenotype","termid":"FYPO:0001312"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal monoacylglycerol phosphate chain length","synonyms":[{"name":"normal lysophospholipid chain length","type":"exact"},{"name":"normal lysophospholipid fatty acid chain length","type":"exact"},{"name":"normal monoacylglycerol phosphate chain length during mitotic cell cycle","type":"related"},{"name":"normal monoacylglycerol phosphate chain length during vegetative growth","type":"exact"},{"name":"normal monoacylglycerol phosphate fatty acid chain length","type":"exact"}],"termid":"FYPO:0005582"}


id: PBO:0078047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 37","termid":"PBO:0078047"}


id: GO:0015414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + nitrate(out) = ADP + phosphate + nitrate(in).","definition_xrefs":["RHEA:13181"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrate transmembrane transporter activity","termid":"GO:0015112"},{"relation_name":"is_a","term_name":"ATPase-coupled inorganic anion transmembrane transporter activity","termid":"GO:0043225"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type nitrate transporter activity","secondary_identifiers":["EC:7.3.2.4","MetaCyc:3.6.3.26-RXN"],"synonyms":[{"name":"ATPase-coupled nitrate transmembrane transporter activity","type":"related"},{"name":"nitrate ABC transporter","type":"exact"},{"name":"nitrate transmembrane-transporting ATPase activity","type":"related"},{"name":"nitrate transporting ATPase activity","type":"related"},{"name":"nitrate-transporting ATPase activity","type":"related"}],"termid":"GO:0015414"}


id: GO:1900747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of vascular endothelial growth factor signaling pathway.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of vascular endothelial growth factor signaling pathway","termid":"GO:1900746"},{"relation_name":"is_a","term_name":"negative regulation of cellular response to vascular endothelial growth factor stimulus","termid":"GO:1902548"},{"relation_name":"negatively_regulates","term_name":"vascular endothelial growth factor signaling pathway","termid":"GO:0038084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of vascular endothelial growth factor signaling pathway","synonyms":[{"name":"down regulation of VEGF signaling","type":"exact"},{"name":"down regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"down regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"down regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"down-regulation of VEGF signaling","type":"exact"},{"name":"down-regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"down-regulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"down-regulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"downregulation of VEGF signaling","type":"exact"},{"name":"downregulation of VEGF-activated signaling pathway","type":"exact"},{"name":"downregulation of vascular endothelial growth factor signaling pathway","type":"exact"},{"name":"downregulation of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"inhibition of VEGF signaling","type":"exact"},{"name":"inhibition of VEGF-activated signaling pathway","type":"exact"},{"name":"inhibition of vascular endothelial growth factor signaling pathway","type":"narrow"},{"name":"inhibition of vascular endothelial growth factor signalling pathway","type":"exact"},{"name":"negative regulation of VEGF signaling","type":"exact"},{"name":"negative regulation of VEGF-activated signaling pathway","type":"exact"},{"name":"negative regulation of vascular endothelial growth factor signalling pathway","type":"exact"}],"termid":"GO:1900747"}


id: GO:0007268
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of classical neurotransmitter molecules from a presynapse, across a chemical synapse, the subsequent activation of neurotransmitter receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:jl","MeSH:D009435"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterograde trans-synaptic signaling","termid":"GO:0098916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemical synaptic transmission","secondary_identifiers":["Reactome:R-HSA-451307","Reactome:R-HSA-9619229","Wikipedia:Neurotransmission","Reactome:R-HSA-112316","Reactome:R-HSA-442742","Reactome:R-HSA-442720","Reactome:R-HSA-451308","Reactome:R-HSA-9619483","Reactome:R-HSA-9620244","Reactome:R-HSA-442729"],"synonyms":[{"name":"neurotransmission","type":"related"},{"name":"signal transmission across a synapse","type":"broad"},{"name":"synaptic transmission","type":"broad"}],"termid":"GO:0007268"}


id: PBO:0052258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine demethylase 1A","termid":"PBO:0052258"}


id: SO:0000638
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Part of an rRNA transcription unit that is transcribed but discarded during maturation, not giving rise to any part of rRNA.","direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA_primary_transcript_region","termid":"SO:0000838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcribed_spacer_region","synonyms":[{"name":"transcribed spacer region","type":"exact"}],"termid":"SO:0000638"}


id: GO:0008365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and deposition of the chitin-based cuticle of adults following the apolysis of the pupal cuticle. The adult insect cuticle contains cuticullin, a protein epicuticle and a lamellate procuticle. An example of this process is adult chitin-based cuticle development in Drosophila melanogaster.","definition_xrefs":["ISBN:0879694238","GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chitin-based cuticle development","termid":"GO:0040003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adult chitin-based cuticle development","synonyms":[{"name":"adult chitin-based cuticle anabolism","type":"exact"},{"name":"adult chitin-based cuticle biosynthetic process","type":"exact"},{"name":"adult chitin-based cuticle formation","type":"exact"},{"name":"adult chitin-based cuticle synthesis","type":"exact"},{"name":"adult cuticle anabolism","type":"broad"},{"name":"adult cuticle biosynthetic process","type":"broad"},{"name":"adult cuticle formation","type":"broad"},{"name":"adult cuticle synthesis","type":"broad"}],"termid":"GO:0008365"}


id: GO:0033917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of pectic acid from the non-reducing end, releasing digalacturonate.","definition_xrefs":["EC:3.2.1.82"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"exo-poly-alpha-galacturonosidase activity","secondary_identifiers":["RHEA:56232","MetaCyc:3.2.1.82-RXN"],"synonyms":[{"name":"exopolygalacturanosidase activity","type":"related"},{"name":"exopolygalacturonosidase activity","type":"related"}],"termid":"GO:0033917"}


id: MONDO:0013534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"apolipoprotein c-III deficiency","secondary_identifiers":["OMIM:614028","GARD:18076","UMLS:C3151467","MESH:C566270","MEDGEN:462817","DOID:0111370"],"synonyms":[{"name":"apolipoprotein c-III deficiency","type":"exact"},{"name":"hyperalphalipoproteinemia 2","type":"related"}],"termid":"MONDO:0013534","xrefs":{"Monarch":{"xref_id":"0013534"}}}


id: FYPO:0003499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of pre-replicative complex assembly is increased.","definition_xrefs":["PomBase:mah","PMID:22970243"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal pre-replicative complex assembly","termid":"FYPO:0000773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000293","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of pre-replicative complex assembly","synonyms":[{"name":"increased rate of MCM complex loading","type":"narrow"},{"name":"increased rate of pre-RC assembly","type":"exact"},{"name":"increased rate of pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"increased rate of pre-replicative complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0003499"}


id: PBO:0050677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 4","termid":"PBO:0050677"}


id: PBO:0041601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbonic anhydrase 12","termid":"PBO:0041601"}


id: PBO:0062150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 29","termid":"PBO:0062150"}


id: PBO:0091328
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar Protein Sorting","termid":"PBO:0091328"}


id: MONDO:1011079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in domestic ferret.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, domestic ferret","secondary_identifiers":["OMIA:001033-9669"],"termid":"MONDO:1011079","xrefs":{"Monarch":{"xref_id":"1011079"}}}


id: PBO:0044670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"damage specific DNA binding protein 1","termid":"PBO:0044670"}


id: PBO:0065022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin 3 pseudogene 1","termid":"PBO:0065022"}


id: PBO:0085082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear dsRNA-specific ribonuclease (RNase III); involved in rDNA transcription, rRNA processing and U2 snRNA 3' end formation by cleavage of a stem-loop structure at the 3' end of U2 snRNA; involved in polyadenylation-independent transcription termination; involved in the cell wall stress response, regulating the degradation of cell wall integrity and morphogenesis checkpoint genes","termid":"PBO:0085082"}


id: GO:0019433
data:
  {"annotated_genes":["SJAG_03604","SJAG_01036","SJAG_02089","SJAG_02543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73443,93908,100479,119650],"is_not":false,"summary":null,"term":"GO:0019433"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a triglyceride, any triester of glycerol.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"},{"relation_name":"is_a","term_name":"acylglycerol catabolic process","termid":"GO:0046464"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01036":null,"SJAG_02089":null,"SJAG_02543":null,"SJAG_03604":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"triglyceride catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:LIPAS-PWY","Reactome:R-HSA-163560"],"synonyms":[{"name":"triacylglycerol catabolic process","type":"exact"},{"name":"triacylglycerol catabolism","type":"exact"},{"name":"triglyceride breakdown","type":"exact"},{"name":"triglyceride catabolism","type":"exact"},{"name":"triglyceride degradation","type":"exact"}],"termid":"GO:0019433","terms_by_termid":{"GO:0019433":null}}


id: PBO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocyst complex component 7","termid":"PBO:0046754"}


id: MONDO:0012093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 3","secondary_identifiers":["MEDGEN:373367","GARD:15439","OMIM:608656","UMLS:C1837595","MESH:C563883"],"synonyms":[{"name":"HPC3","type":"related"},{"name":"prostate cancer, hereditary, 3","type":"exact"},{"name":"prostate cancer, hereditary, type 3","type":"exact"},{"name":"prostate cancer, susceptibility to, 3","type":"exact"}],"termid":"MONDO:0012093","xrefs":{"Monarch":{"xref_id":"0012093"}}}


id: PBO:0042360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD109 molecule","termid":"PBO:0042360"}


id: GO:0014910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell migration.","definition_xrefs":["GOC:mtg_muscle","CL:0000192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"smooth muscle cell migration","termid":"GO:0014909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of smooth muscle cell migration","termid":"GO:0014910"}


id: PBO:0004099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Pom152","termid":"PBO:0004099"}


id: GO:0051113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transient adenylylation of peptidyl-histidine to form 1'-(phospho-5'-adenosine)-L-histidine (otherwise known as tau-AMP-histidine, tele-AMP-histidine).","definition_xrefs":["RESID:AA0371"],"gene_count":0,"genotype_count":0,"name":"obsolete enzyme active site formation via 1'-(phospho-5'-adenosine)-L-histidine (obsolete GO:0051113)","termid":"GO:0051113"}


id: PBO:0085545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; overproduction suppresses mutations affecting RNA polymerase III-dependent transcription; homologous to mammalian ribosomal protein S20 and bacterial S10","termid":"PBO:0085545"}


id: PATO:0000986
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000986 absolute consistency (obsolete PATO:0000986)","termid":"PATO:0000986"}


id: GO:1904011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an Aroclor 1254 stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:18602130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to Aroclor 1254","termid":"GO:1904010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to Aroclor 1254","termid":"GO:1904011"}


id: PBO:0003489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NifU-like protein (predicted)","termid":"PBO:0003489"}


id: PBO:0071921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S3 pseudogene 6","termid":"PBO:0071921"}


id: MONDO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete alveolar echinococcosis (obsolete MONDO:0001448)","termid":"MONDO:0001448","xrefs":{"Monarch":{"xref_id":"0001448"}}}


id: MONDO:0005342
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of a specific segment of glomeruli within the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"},{"relation_name":"is_a","term_name":"hereditary nephritis","termid":"MONDO:0005334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"IgA glomerulonephritis","secondary_identifiers":["SCTID:68779003","DOID:2986","UMLS:C0017661","NCIT:C34643","NANDO:2200121","NORD:1298","EFO:0004194","MEDGEN:9032","MESH:D005922","Orphanet:34145","NANDO:1200366","ICD9:583.9"],"synonyms":[{"name":"Berger's IgA or IgG nephropathy","type":"exact"},{"name":"Berger's disease","type":"exact"},{"name":"IgA Nephropathy","type":"exact"},{"name":"IgA glomerulonephritis","type":"exact"},{"name":"IgA nephropathy","type":"exact"},{"name":"focal glomerulonephritis","type":"exact"},{"name":"primary IgA nephropathy","type":"exact"},{"name":"segmental glomerulonephritis","type":"exact"}],"termid":"MONDO:0005342","xrefs":{"Monarch":{"xref_id":"0005342"}}}


id: PBO:0088704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arf GEF","termid":"PBO:0088704"}


id: GO:0030843
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of intermediate filament depolymerization.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intermediate filament depolymerization","termid":"GO:0030842"},{"relation_name":"is_a","term_name":"negative regulation of cytoskeleton organization","termid":"GO:0051494"},{"relation_name":"is_a","term_name":"negative regulation of protein depolymerization","termid":"GO:1901880"},{"relation_name":"negatively_regulates","term_name":"intermediate filament depolymerization","termid":"GO:0045106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"negatively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intermediate filament depolymerization","synonyms":[{"name":"down regulation of intermediate filament depolymerization","type":"exact"},{"name":"down-regulation of intermediate filament depolymerization","type":"exact"},{"name":"downregulation of intermediate filament depolymerization","type":"exact"},{"name":"inhibition of intermediate filament depolymerization","type":"narrow"},{"name":"negative regulation of intermediate filament polymerization and/or depolymerization","type":"broad"}],"termid":"GO:0030843"}


id: FYPO:0003970
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which mitotic sister chromatid segregation stops before completing separation of chromosomes, and partially separated DNA masses are connected by one or more bridges formed of chromatin.","definition_xrefs":["PomBase:mah","PMID:12455694"],"direct_ancestors":[{"relation_name":"is_a","term_name":"incomplete mitotic sister chromatid segregation","termid":"FYPO:0003757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000337","FYPO:0001985","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge","synonyms":[{"name":"incomplete mitotic sister chromatid segregation, with chromatin bridge, during vegetative growth","type":"exact"},{"name":"incomplete mitotic sister chromatid separation, with chromatin bridge","type":"related"},{"name":"incomplete sister chromatid segregation, with chromatin bridge during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003970"}


id: GO:1901948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate.","definition_xrefs":["PMID:22027823","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"diterpenoid catabolic process","termid":"GO:0016103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate catabolic process","synonyms":[{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate breakdown","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate catabolism","type":"exact"},{"name":"5alpha,9alpha,10beta-labda-8(20),13-dien-15-yl diphosphate degradation","type":"exact"}],"termid":"GO:1901948"}


id: PATO:0001970
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A branched quality inhering in a bearer by virtue of the bearer's having secondary branches joined together in a series of prominent arches.","definition_xrefs":["Hickey:1988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched","termid":"PATO:0000402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brochidodromous","termid":"PATO:0001970"}


id: PBO:0079434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma complex associated protein 2","termid":"PBO:0079434"}


id: PBO:0052664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 32","termid":"PBO:0052664"}


id: GO:0061724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The selective degradation of lipid droplets by macroautophagy.","definition_xrefs":["GOC:autophagy","PMID:26076903","PMID:23708524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macroautophagy","termid":"GO:0016236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"lipophagy","secondary_identifiers":["Reactome:R-HSA-9613354"],"termid":"GO:0061724"}


id: MONDO:0004500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma originating from the apical lung. Most superior sulcus lung carcinomas are bronchogenic carcinomas. This carcinoma may be associated with Pancoast syndrome. lt is also known as Pancoast tumor.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant superior sulcus neoplasm","termid":"MONDO:0006883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung superior sulcus carcinoma","secondary_identifiers":["NCIT:C7779","MEDGEN:234910","UMLS:C1336529","DOID:8208"],"synonyms":[{"name":"superior sulcus carcinoma of lung","type":"related"},{"name":"superior sulcus carcinoma of the lung","type":"exact"},{"name":"superior sulcus lung carcinoma","type":"exact"}],"termid":"MONDO:0004500","xrefs":{"Monarch":{"xref_id":"0004500"}}}


id: PBO:0074263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 5A1","termid":"PBO:0074263"}


id: GO:0102265
data:
  {"annotated_genes":["SJAG_03240"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[67434],"is_not":false,"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouracil47 in tRNA + NAD(P) = H+ + a uracil47 in tRNA + NAD(P)H.","definition_xrefs":["EC:1.3.1.89","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA dihydrouridine synthase activity","termid":"GO:0017150"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824","GO:0140098","GO:0140101"],"is_obsolete":false,"name":"tRNA-dihydrouridine47 synthase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:RXN-12457"],"termid":"GO:0102265","terms_by_termid":{"GO:0102265":null}}


id: PBO:0029422
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029422"}


id: PBO:0078259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable B (pseudogene)","termid":"PBO:0078259"}


id: MONDO:0971178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant polycystic kidney disease","termid":"MONDO:0004691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0000426"],"is_obsolete":false,"name":"polycystic kidney disease 8","secondary_identifiers":["MEDGEN:1854762","OMIM:620903","UMLS:C5935640"],"termid":"MONDO:0971178","xrefs":{"Monarch":{"xref_id":"0971178"}}}


id: PBO:0062697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 51 subfamily C member 1 pseudogene","termid":"PBO:0062697"}


id: FYPO:0003775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of DNA recombination between cDNAs derived from transposon-encoded genes is decreased.","definition_xrefs":["PMID:10022921","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased DNA recombination","termid":"FYPO:0002712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000293","FYPO:0000002"],"is_obsolete":false,"name":"decreased transposon-derived cDNA recombination","synonyms":[{"name":"decreased recombination of transposon-derived cDNAs","type":"exact"},{"name":"decreased transposon-derived cDNA recombination frequency","type":"exact"},{"name":"decreased transposon-derived cDNA recombination rate","type":"related"},{"name":"reduced transposon-derived cDNA recombination","type":"exact"}],"termid":"FYPO:0003775"}


id: MONDO:0012096
data:
  {"annotated_genes":["SJAG_03815","SJAG_02919","SJAG_04567"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88589,88590,88591],"is_not":false,"summary":null,"term":"MONDO:0012096"}]},"cv_name":"mondo","definition":"Autosomal dominant Charcot-Marie-Tooth disease type 2L (CMT2L) is a form of axonal Charcot-Marie-Tooth disease, a peripheral sensorimotor neuropathy. In the single family reported to date, CMT2L onset is between 15 and 33 years. Patients present with a symmetric distal weakness of legs and occasionally of the hands, absent or reduced tendon reflexes, distal legs sensory loss and frequently a pes cavus. Progression is slow.","definition_xrefs":["Orphanet:99945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02919":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2L","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:608673","UMLS:C1837552","SCTID:719513008","DOID:0110174","MEDGEN:324826","GARD:12432"],"synonyms":[{"name":"CMT2L","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2 caused by mutation in HSPB8","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 2L","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal dominant, type 2L","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2L","type":"related"},{"name":"Charcot-Marie-Tooth neuropathy axonal type 2L","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, axonal, type 2L","type":"related"},{"name":"HSPB8 Charcot-Marie-Tooth disease type 2","type":"exact"},{"name":"autosomal dominant Charcot-Marie-Tooth disease type 2L","type":"exact"},{"name":"autosomal dominant axonal Charcot-Marie-Tooth disease type 2L","type":"exact"}],"termid":"MONDO:0012096","terms_by_termid":{"MONDO:0012096":null},"xrefs":{"Monarch":{"xref_id":"0012096"}}}


id: GO:0019227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The propagation of an action potential along an axon, away from the soma.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"action potential propagation","termid":"GO:0098870"},{"relation_name":"part_of","term_name":"transmission of nerve impulse","termid":"GO:0019226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuronal action potential propagation","termid":"GO:0019227"}


id: PBO:0049192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor AMPA type subunit 3","termid":"PBO:0049192"}


id: GO:0042926
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the directed movement of 3-hydroxyphenylpropionic acid from one side of a membrane to the other.","definition_xrefs":["GOC:jl","PMID:9098055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid transmembrane transporter activity","termid":"GO:0008028"},{"relation_name":"is_a","term_name":"xenobiotic transmembrane transporter activity","termid":"GO:0042910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"3-hydroxyphenylpropionic acid transmembrane transporter activity","synonyms":[{"name":"3-(3-hydroxyphenyl)propionic acid transporter activity","type":"exact"},{"name":"3-hydroxyphenylpropionic acid transporter activity","type":"related"},{"name":"m-hydroxyphenylpropionic acid transporter activity","type":"exact"}],"termid":"GO:0042926"}


id: PBO:0077063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiamine triphosphatase","termid":"PBO:0077063"}


id: PBO:0070469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 4","termid":"PBO:0070469"}


id: MONDO:1011553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Legg-Calvé-Perthes disease that occurs in Rhesus monkey.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Legg-Calvé-Perthes disease, non-human animal","termid":"MONDO:1011453"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Legg-Calvé-Perthes disease, Rhesus monkey","secondary_identifiers":["OMIA:000586-9544"],"termid":"MONDO:1011553","xrefs":{"Monarch":{"xref_id":"1011553"}}}


id: MONDO:0013034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any striate palmoplantar keratoderma in which the cause of the disease is a mutation in the DSP gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"striate palmoplantar keratoderma","termid":"MONDO:0018865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"keratosis palmoplantaris striata 2","secondary_identifiers":["MEDGEN:343725","DOID:0081109","OMIM:612908","GARD:15590","MESH:C565102","UMLS:C1852127"],"synonyms":[{"name":"DSP striate palmoplantar keratoderma","type":"exact"},{"name":"PPKS2","type":"related"},{"name":"keratoderma, palmoplantar, striate form 2","type":"related"},{"name":"keratosis palmoplantaris striata II","type":"related"},{"name":"keratosis palmoplantaris striata type 2","type":"exact"},{"name":"striate palmoplantar keratoderma 2","type":"related"},{"name":"striate palmoplantar keratoderma caused by mutation in DSP","type":"exact"}],"termid":"MONDO:0013034","xrefs":{"Monarch":{"xref_id":"0013034"}}}


id: GO:2001295
data:
  {"annotated_genes":["SJAG_03313"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67512],"is_not":false,"summary":null,"term":"GO:2001295"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of malonyl-CoA, the S-malonyl derivative of coenzyme A.","definition_xrefs":["GOC:yaf","UniPathway:UPA00655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA biosynthetic process","termid":"GO:0071616"},{"relation_name":"is_a","term_name":"malonyl-CoA metabolic process","termid":"GO:2001293"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"malonyl-CoA biosynthetic process","references_by_uniquename":{"GO_REF:0000041":null},"synonyms":[{"name":"malonyl-CoA anabolism","type":"exact"},{"name":"malonyl-CoA biosynthesis","type":"exact"},{"name":"malonyl-CoA formation","type":"exact"},{"name":"malonyl-CoA synthesis","type":"exact"}],"termid":"GO:2001295","terms_by_termid":{"GO:2001295":null}}


id: GO:1900069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular hyperosmotic salinity response.","definition_xrefs":["GOC:TermGenie","PMID:16278455","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular response to osmotic stress","termid":"GO:0106049"},{"relation_name":"is_a","term_name":"regulation of response to salt stress","termid":"GO:1901000"},{"relation_name":"regulates","term_name":"cellular hyperosmotic salinity response","termid":"GO:0071475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular hyperosmotic salinity response","synonyms":[{"name":"regulation of cellular response to hyperosmotic salt stress","type":"exact"}],"termid":"GO:1900069"}


id: GO:0046739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of a virus between cells in a multicellular organism. The cells can be adjacent or spatially separated (e.g. in different tissues or organs).","definition_xrefs":["ISBN:0781718325","GOC:bf","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migration in host","termid":"GO:0044001"},{"relation_name":"is_a","term_name":"transport of virus","termid":"GO:0046794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transport of virus in multicellular host","synonyms":[{"name":"spread of virus in multicellular host","type":"related"},{"name":"spread of virus within multicellular host","type":"exact"},{"name":"viral spread within multicellular host","type":"exact"}],"termid":"GO:0046739"}


id: GO:0006043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glucosamine (2-amino-2-deoxyglucopyranose), an aminodeoxysugar that occurs in combined form in chitin.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosamine metabolic process","termid":"GO:0006041"},{"relation_name":"is_a","term_name":"glucosamine-containing compound catabolic process","termid":"GO:1901072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glucosamine catabolic process","synonyms":[{"name":"chitosamine catabolic process","type":"exact"},{"name":"chitosamine catabolism","type":"exact"},{"name":"glucosamine breakdown","type":"exact"},{"name":"glucosamine catabolism","type":"exact"},{"name":"glucosamine degradation","type":"exact"}],"termid":"GO:0006043"}


id: PATO:0000976
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000976 permeability value (obsolete PATO:0000976)","termid":"PATO:0000976"}


id: SO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including at least one D-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_J_cluster","synonyms":[{"name":"D J cluster","type":"exact"},{"name":"D-J-CLUSTER","type":"exact"}],"termid":"SO:0000560"}


id: PR:Q9US37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1039.04 gene.","definition_xrefs":["UniProtKB:Q9US37","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C1039.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.04","synonyms":[{"name":"Spom972h-SPAC1039.04","type":"exact"}],"termid":"PR:Q9US37"}


id: PBO:0072742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein A7","termid":"PBO:0072742"}


id: PBO:0001825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose phosphate 3-epimerase (predicted)","termid":"PBO:0001825"}


id: PBO:0057089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 185","termid":"PBO:0057089"}


id: GO:1903386
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of homophilic cell adhesion.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:21724833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell-cell adhesion","termid":"GO:0022408"},{"relation_name":"is_a","term_name":"regulation of homophilic cell adhesion","termid":"GO:1903385"},{"relation_name":"negatively_regulates","term_name":"homophilic cell adhesion via plasma membrane adhesion molecules","termid":"GO:0007156"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"negative regulation of homophilic cell adhesion","synonyms":[{"name":"down regulation of homophilic cell adhesion","type":"exact"},{"name":"down-regulation of homophilic cell adhesion","type":"exact"},{"name":"downregulation of homophilic cell adhesion","type":"exact"},{"name":"inhibition of homophilic cell adhesion","type":"narrow"}],"termid":"GO:1903386"}


id: MONDO:0018835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nodular regenerative hyperplasia of the liver is a rare parenchymatous liver disease characterized by diffuse benign transformation of the hepatic parenchyma into multiple small nodules (composed of regenerating hepatocytes) and that is usually asymptomatic but can lead to the development of non-cirrhotic portal hypertension and its complications, including esophageal variceal bleeding, hypersplenism and ascites. It is often associated with rheumatologic, autoimmune, hematologic, and myeloproliferative disorders as well as various immune deficiency states and exposure certain drugs and toxins.","definition_xrefs":["Orphanet:48372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"nodular regenerative hyperplasia of the liver","secondary_identifiers":["UMLS:C5779783","GARD:10929","MEDGEN:1830387","SCTID:715140008","icd11.foundation:1642018758","ICD9:573.8"],"synonyms":[{"name":"miliary hepatocellular adenomatosis","type":"related"},{"name":"nodular regenerative hyperplasia","type":"related"},{"name":"non-cirrhotic nodular transformation","type":"related"},{"name":"non-cirrhotic nodulation","type":"exact"},{"name":"non-cirrhotic portal hypertension","type":"related"}],"termid":"MONDO:0018835","xrefs":{"Monarch":{"xref_id":"0018835"}}}


id: MONDO:0014222
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"activated PI3K-delta syndrome","termid":"MONDO:0018338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"immunodeficiency 14","secondary_identifiers":["UMLS:C3714976","OMIM:615513","GARD:15979","DOID:0111936","MEDGEN:811535","NORD:111933"],"synonyms":[{"name":"Activated PI3K-Delta syndrome","type":"related"},{"name":"Activated Phosphoinositide 3-Kinase Delta Syndrome (APDS)","type":"exact"},{"name":"IMD14","type":"related"},{"name":"immunodeficiency 14","type":"exact"},{"name":"immunodeficiency 14A, autosomal dominant","type":"exact"},{"name":"immunodeficiency type 14","type":"exact"},{"name":"p110-Delta-Activating mutation causing senescent T cells, lymphadenopathy, and immunodeficiency","type":"related"}],"termid":"MONDO:0014222","xrefs":{"Monarch":{"xref_id":"0014222"}}}


id: GO:0003291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which anatomical structure of an atrial septum intermedium is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial septum morphogenesis","termid":"GO:0060413"},{"relation_name":"part_of","term_name":"atrial septum intermedium development","termid":"GO:0003286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial septum intermedium morphogenesis","termid":"GO:0003291"}


id: GO:0044029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic gene regulation mechanism that positively regulates gene expression by demethylation of cytosine residues in chromosomal CpG islands. CpG islands are genomic regions that contain a high frequency of the CG dinucleotide and are often associated with the transcription start site of genes.","definition_xrefs":["PMID:36150101","Wikipedia:Cpg_island"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription initiation-coupled chromatin remodeling","termid":"GO:0045815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006325","GO:0006351"],"is_obsolete":false,"name":"positive regulation of gene expression via chromosomal CpG island demethylation","synonyms":[{"name":"DNA demethylation","type":"broad"},{"name":"DNA hypomethylation of CpG island","type":"exact"},{"name":"hypomethylation of CpG island","type":"exact"},{"name":"positive regulation of gene expression via chromosomal CpG dinucleotide demethylation","type":"exact"}],"termid":"GO:0044029"}


id: MONDO:0011048
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy-microcephaly-skeletal dysplasia syndrome is characterized by the association of moderate to severe intellectual deficit, microcephaly, epilepsy, coarse face, hirsutism and skeletal abnormalities (scoliosis and retarded bone development). It has been described only once, in two sibs (one male and one female). This syndrome is likely to be an autosomal recessive condition and thus parents should be informed of a 25% risk of recurrence for other children.","definition_xrefs":["Orphanet:1948"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy-microcephaly-skeletal dysplasia syndrome","secondary_identifiers":["MEDGEN:330468","OMIM:601352","UMLS:C1832437","GARD:836"],"synonyms":[{"name":"Battaglia-Neri syndrome","type":"exact"},{"name":"epilepsy - microcephaly - skeletal dysplasia","type":"related"},{"name":"intellectual disability, microcephaly, epilepsy, and coarse face","type":"related"},{"name":"mental retardation, microcephaly, epilepsy, and coarse face","type":"related"}],"termid":"MONDO:0011048","xrefs":{"Monarch":{"xref_id":"0011048"}}}


id: PATO:0000541
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000541 photosensitivity value (obsolete PATO:0000541)","termid":"PATO:0000541"}


id: GO:0035485
data:
  {"annotated_genes":["SJAG_02261"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75515],"is_not":false,"summary":null,"term":"GO:0035485"}]},"cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing an A/G mispair.","definition_xrefs":["GOC:bf","GOC:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatched DNA binding","termid":"GO:0030983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02261":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003677"],"is_obsolete":false,"name":"adenine/guanine mispair binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"A/G mispair binding","type":"exact"},{"name":"G/A mispair binding","type":"related"},{"name":"guanine-adenine mispair binding","type":"exact"}],"termid":"GO:0035485","terms_by_termid":{"GO:0035485":null}}


id: GO:0032818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of natural killer cell activation","termid":"GO:0032815"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation","termid":"GO:0032817"},{"relation_name":"is_a","term_name":"negative regulation of lymphocyte proliferation","termid":"GO:0050672"},{"relation_name":"negatively_regulates","term_name":"natural killer cell proliferation","termid":"GO:0001787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell proliferation","synonyms":[{"name":"down regulation of natural killer cell proliferation","type":"exact"},{"name":"down-regulation of natural killer cell proliferation","type":"exact"},{"name":"downregulation of natural killer cell proliferation","type":"exact"},{"name":"inhibition of natural killer cell proliferation","type":"narrow"},{"name":"negative regulation of NK cell proliferation","type":"exact"}],"termid":"GO:0032818"}


id: GO:0001310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Increase in abundance of circular DNA molecules containing ribosomal DNA repeats in dividing cells as they age. These molecules originate in the chromosome but are excised and circularized, often by intramolecular homologous recombination between direct tandem repeats, and then replicated independently of chromosomal replication.","definition_xrefs":["GOC:jh","PMID:12044934"],"gene_count":0,"genotype_count":0,"name":"obsolete extrachromosomal rDNA circle accumulation involved in replicative cell aging (obsolete GO:0001310)","synonyms":[{"name":"extrachromosomal rDNA circle accumulation during replicative cell ageing","type":"related"},{"name":"extrachromosomal rDNA circle accumulation during replicative cell aging","type":"related"},{"name":"extrachromosomal ribosomal DNA circle accumulation during replicative cell aging","type":"related"}],"termid":"GO:0001310"}


id: PBO:0031533
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peptide-N4-(N-acetyl-beta-glucosaminyl)asparagine_amidase_activity","termid":"PBO:0031533"}


id: PBO:0028269
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_nitric_oxide_level_during_cellular_response_to_cadmium_ion","termid":"PBO:0028269"}


id: FYPO:0006529
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the centromere of a chromosome is abnormal during the meiotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"},{"relation_name":"is_a","term_name":"abnormal protein localization to centromere","termid":"FYPO:0005597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to centromere during meiotic cell cycle","synonyms":[{"name":"abnormal protein localisation to centromere during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localisation to chromosome, centromeric region during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localization to chromosome, centric region during meiotic cell cycle","type":"exact"},{"name":"abnormal protein localization to chromosome, centromeric region during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006529"}


id: GO:0009164
data:
  {"annotated_genes":["SJAG_02580","SJAG_01359","SJAG_04927","SJAG_02959","SJAG_00957","SJAG_01673"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89593,89592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006154"},{"annotations":[91204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006216"},{"annotations":[93082,114229,77217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006152"},{"annotations":[92660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046135"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of any one of a family of organic molecules consisting of a purine or pyrimidine base covalently bonded to a sugar ribose (a ribonucleoside) or deoxyribose (a deoxyribonucleoside).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside metabolic process","termid":"GO:0009116"},{"relation_name":"is_a","term_name":"nucleobase-containing small molecule catabolic process","termid":"GO:0034656"},{"relation_name":"is_a","term_name":"glycosyl compound catabolic process","termid":"GO:1901658"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00957":null,"SJAG_01359":null,"SJAG_01673":null,"SJAG_02580":null,"SJAG_02959":null,"SJAG_04927":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"nucleoside catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleoside breakdown","type":"exact"},{"name":"nucleoside catabolism","type":"exact"},{"name":"nucleoside degradation","type":"exact"}],"termid":"GO:0009164","terms_by_termid":{"GO:0006152":null,"GO:0006154":null,"GO:0006216":null,"GO:0046135":null}}


