# terms

id: PBO:0086163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for ribosomal large subunit maturation; functionally redundant with Ssf1p; member of the Brix family; SSF2 has a paralog, SSF1, that arose from the whole genome duplication","termid":"PBO:0086163"}


id: SO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_amino_acid_feature","synonyms":[{"name":"modified amino acid feature","type":"exact"}],"termid":"SO:0001385"}


id: GO:0072680
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The movement of a thymocyte through distinct intrathymic niches (e.g. medulla, cortex), where it receives a unique set of developmental cues required for T-cell development, dependent on extracellular matrix components including fibronectin, collagen and laminin.","definition_xrefs":["GOC:mah","PMID:20856819","GOC:BHF","CL:0000893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"thymocyte migration","termid":"GO:0072679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extracellular matrix-dependent thymocyte migration","synonyms":[{"name":"extracellular matrix-dependent immature T cell migration","type":"related"},{"name":"extracellular matrix-dependent immature T lymphocyte migration","type":"related"},{"name":"extracellular matrix-dependent immature T-cell migration","type":"related"},{"name":"extracellular matrix-dependent immature T-lymphocyte migration","type":"related"},{"name":"extracellular matrix-dependent thymic lymphocyte migration","type":"exact"}],"termid":"GO:0072680"}


id: PBO:0084286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein required for V-ATPase function; not an actual component of the vacuolar H+-ATPase (V-ATPase) complex; functions in the assembly of the V-ATPase; localized to the endoplasmic reticulum (ER); involved in methionine restriction extension of chronological lifespan in an autophagy-dependent manner","termid":"PBO:0084286"}


id: GO:0002658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of peripheral tolerance induction.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"peripheral tolerance induction","termid":"GO:0002465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of peripheral tolerance induction","termid":"GO:0002658"}


id: PBO:0081613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 541","termid":"PBO:0081613"}


id: PBO:0061748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 like export factor 1 pseudogene 1","termid":"PBO:0061748"}


id: PBO:0079619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin conjugating enzyme E2 L4 (pseudogene)","termid":"PBO:0079619"}


id: PBO:0040870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMI1 proto-oncogene, polycomb ring finger","termid":"PBO:0040870"}


id: GO:0007155
data:
  {"annotated_genes":["SJAG_04723","SJAG_03484","SJAG_00239","SJAG_04720","SJAG_00156","SJAG_00910","SJAG_01975","SJAG_02380","SJAG_00926","SJAG_01778","SJAG_03473","SJAG_03802","SJAG_01253","SJAG_04191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78543,79122,80527,71904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000128"},{"annotations":[105568],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036349"},{"annotations":[100588,101306],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0022408"},{"annotations":[108279,105569],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0060257"},{"annotations":[113429,116143,118203,107924,110671,110797],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1900735"}]},"cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix, via cell adhesion molecules.","definition_xrefs":["GOC:hb","GOC:pf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00156":null,"SJAG_00239":null,"SJAG_00910":null,"SJAG_00926":null,"SJAG_01253":null,"SJAG_01778":null,"SJAG_01975":null,"SJAG_02380":null,"SJAG_03473":null,"SJAG_03484":null,"SJAG_03802":null,"SJAG_04191":null,"SJAG_04720":null,"SJAG_04723":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell adhesion","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Cell_adhesion","GO:0098602"],"synonyms":[{"name":"cell adhesion molecule activity","type":"related"},{"name":"single organism cell adhesion","type":"related"}],"termid":"GO:0007155","terms_by_termid":{"GO:0000128":null,"GO:0022408":null,"GO:0036349":null,"GO:0060257":null,"GO:1900735":null}}


id: FYPO:0002746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-valine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular valine level","synonyms":[{"name":"normal cellular L-valine level","type":"exact"},{"name":"normal cellular valine level during mitotic cell cycle","type":"related"},{"name":"normal cellular valine level during vegetative growth","type":"exact"},{"name":"normal level of valine in cell","type":"exact"}],"termid":"FYPO:0002746"}


id: GO:0051418
data:
  {"annotated_genes":["SJAG_02886","SJAG_02761","SJAG_00856","SJAG_02737","SJAG_01756","SJAG_07018","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030954"},{"annotations":[119011,108479,102107,102402,103010,119258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051415"},{"annotations":[103011,120746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051417"}]},"cv_name":"biological_process","definition":"The 'de novo' formation of a microtubule, mediated by the microtubule organizing center.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule nucleation","termid":"GO:0007020"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00856":null,"SJAG_01756":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02886":null,"SJAG_03540":null,"SJAG_07018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0000226","GO:0007010"],"is_obsolete":false,"name":"microtubule nucleation by microtubule organizing center","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"MTOC-mediated microtubule nucleation","type":"exact"},{"name":"microtubule nucleation by MTOC","type":"exact"},{"name":"microtubule nucleation by microtubule organising centre","type":"exact"},{"name":"microtubule organizing center-mediated microtubule nucleation","type":"exact"}],"termid":"GO:0051418","terms_by_termid":{"GO:0030954":null,"GO:0051415":null,"GO:0051417":null}}


id: PBO:0041432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 8 open reading frame 89","termid":"PBO:0041432"}


id: GO:0030703
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Construction of the eggshell, a product of the somatic follicle cell epithelium and a structure that supports the egg in a hostile environment, minimizing water loss whilst allowing gas exchanges essential for embryonic respiration.","definition_xrefs":["ISBN:0879694238","PMID:10822261","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eggshell formation","termid":"GO:0030703"}


id: GO:0031485
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A myosin complex containing a class XV myosin heavy chain and associated light chains. Myosin XV is single headed, and has a large extension (1200aa) at the N-terminus of the motor domain, two IQ motifs and a tail with a similar domain structure to that of the tail of myosin VII.","definition_xrefs":["PMID:10722873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unconventional myosin complex","termid":"GO:0016461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0015629","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"myosin XV complex","termid":"GO:0031485"}


id: FYPO:0003574
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 14 of histone H3 in centromere outer repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K14 acetylation during vegetative growth","termid":"FYPO:0003224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal histone H3-K14 acetylation at centromere outer repeat during vegetative growth","synonyms":[{"name":"normal histone H3-K14 acetylation at centromere otr during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K14 acetylation at centromeric outer repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3-K14 acetylation at pericentric region during vegetative growth","type":"related"},{"name":"normal histone H3-K14 acetylation at pericentromeric region during vegetative growth","type":"related"},{"name":"normal histone H3K14 acetylation at centromere outer repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0003574"}


id: MOD:01308
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative -","definition_xrefs":["Unimod:332#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphate labeled with biotin-HPDP","termid":"MOD:00639"},{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiophosphate labeled with biotin-HPDP -site T","synonyms":[{"name":"Thiophos-S-S-biotin","type":"related"},{"name":"thiophosphate labeled with biotin-HPDP","type":"related"}],"termid":"MOD:01308"}


id: PBO:0083497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YJL210W/PEX2","termid":"PBO:0083497"}


id: PBO:0071598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 15","termid":"PBO:0071598"}


id: PBO:0052223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 1","termid":"PBO:0052223"}


id: GO:2000534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of renal albumin absorption.","definition_xrefs":["GOC:yaf","GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of renal albumin absorption","termid":"GO:2000532"},{"relation_name":"positively_regulates","term_name":"renal albumin absorption","termid":"GO:0097018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of renal albumin absorption","termid":"GO:2000534"}


id: GO:0046327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycerol, 1,2,3-propanetriol, from other compounds, including pyruvate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate metabolic process","termid":"GO:0006090"},{"relation_name":"is_a","term_name":"glycerol biosynthetic process","termid":"GO:0006114"},{"relation_name":"part_of","term_name":"triglyceride biosynthetic process","termid":"GO:0019432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"part_of","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"glycerol biosynthetic process from pyruvate","synonyms":[{"name":"glycerol anabolism from pyruvate","type":"exact"},{"name":"glycerol formation from pyruvate","type":"exact"},{"name":"glycerol synthesis from pyruvate","type":"exact"},{"name":"glyceroneogenesis","type":"exact"}],"termid":"GO:0046327"}


id: PBO:0089718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase complex PHD finger subunit Nto1","termid":"PBO:0089718"}


id: GO:0003394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell, either to another cell or to an underlying substrate such as the extracellular matrix that contributes to the process of retrograde extension of a dendrite.","definition_xrefs":["GOC:tb","GOC:dph","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell adhesion involved in retrograde extension","termid":"GO:0003392"},{"relation_name":"part_of","term_name":"dendrite development by retrograde extension","termid":"GO:0003390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell adhesion involved in dendrite retrograde extension","termid":"GO:0003394"}


id: PBO:0083864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fatty-acyl coenzyme A oxidase; involved in the fatty acid beta-oxidation pathway; localized to the peroxisomal matrix; component of a light sensing pathway, converting light into a hydrogen peroxide signal, modulating nucleo-cytoplasmic shuttling of stress-responsive transcription factor, Msn2p","termid":"PBO:0083864"}


id: PBO:0052613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 5","termid":"PBO:0052613"}


id: MONDO:0043543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any adverse condition in a patient occurring as the result of treatment by a physician, surgeon, or other health professional, especially infections acquired by a patient during the course of treatment.","definition_xrefs":["MESH:D007049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iatrogenic disease","secondary_identifiers":["SCTID:12456005","MEDGEN:9393","ICD10CM:T80-T88","UMLS:C0020732","ICD9:799.9"],"synonyms":[{"name":"condition, hospital-acquired","type":"related"},{"name":"conditions, hospital-acquired","type":"related"},{"name":"disease, iatrogenic","type":"related"},{"name":"diseases, iatrogenic","type":"related"},{"name":"hospital acquired condition","type":"related"},{"name":"hospital-acquired condition","type":"related"},{"name":"hospital-acquired conditions","type":"related"},{"name":"iatrogenic diseases","type":"related"},{"name":"iatrogenic disorder","type":"exact"}],"termid":"MONDO:0043543","xrefs":{"Monarch":{"xref_id":"0043543"}}}


id: GO:0055078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of sodium ions within an organism or cell.","definition_xrefs":["GOC:jid","GOC:mah","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"sodium ion homeostasis","termid":"GO:0055078"}


id: PBO:0073538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 and PX domains 2B","termid":"PBO:0073538"}


id: PBO:0042996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"checkpoint with forkhead and ring finger domains","termid":"PBO:0042996"}


id: GO:0008688
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-(3-hydroxyphenyl)propionate + NADH + oxygen + H+ = 3-(2,3-dihydroxyphenyl)propionate + NAD+ + H2O.","definition_xrefs":["RHEA:24785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-(3-hydroxyphenyl)propionate hydroxylase activity","secondary_identifiers":["MetaCyc:MHPHYDROXY-RXN","EC:1.14.13.127","KEGG_REACTION:R06786"],"termid":"GO:0008688"}


id: GO:0062043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that starts or increases the rate, frequency or extent of cardiac epithelial to mesenchymal transition, a transition where a cardiac epithelial cell loses apical/basolateral polarity, severs intercellular adhesive junctions, degrades basement membrane components and becomes a migratory mesenchymal cell.","definition_xrefs":["PMID:20951801","GOC:BHF","GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial to mesenchymal transition","termid":"GO:0010718"},{"relation_name":"is_a","term_name":"regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062042"},{"relation_name":"positively_regulates","term_name":"cardiac epithelial to mesenchymal transition","termid":"GO:0060317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac epithelial to mesenchymal transition","termid":"GO:0062043"}


id: GO:0044304
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The main axonal trunk, as opposed to the collaterals; i.e., excluding collaterals, terminal, spines, or dendrites.","definition_xrefs":["NIF_Subcellular:sao1596975044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"main axon","synonyms":[{"name":"axon shaft","type":"related"},{"name":"axon trunk","type":"exact"},{"name":"axonal shaft","type":"related"}],"termid":"GO:0044304"}


id: SO:1000025
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transversion from adenine to thymine.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine_to_pyrimidine_transversion","termid":"SO:1000023"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A_to_T_transversion","synonyms":[{"name":"A to T transversion","type":"exact"}],"termid":"SO:1000025"}


id: PBO:0027141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_methyltransferase_activity","termid":"PBO:0027141"}


id: GO:1990664
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcription factor complex formed by two or more subunits of Nkx-2.5. Nkx-2.5 is an evolutionary conserved transcription factor important for the specification and differentiation of cardiomyocytes during heart development. It is also required for spleen development. It binds DNA either as a monomer, or a homodimer, or a heterodimer complex to activate or inhibit expression of genes.","definition_xrefs":["GOC:ame","PMID:22849347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II transcription regulator complex","termid":"GO:0090575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"Nkx-2.5 complex","synonyms":[{"name":"NKX.2-5 homodimer complex","type":"related"},{"name":"NKX2.5 complex","type":"related"},{"name":"NKX2E homodimer complex","type":"related"},{"name":"Nkx-2.5 homodimer complex","type":"narrow"}],"termid":"GO:1990664"}


id: PBO:0001201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall protein Psu1, beta-glucosidase (predicted)","termid":"PBO:0001201"}


id: PBO:0053681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 868","termid":"PBO:0053681"}


id: FYPO:0005118
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a lower extent than normal when the cell is subject to nitrogen starvation. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription","termid":"FYPO:0002876"},{"relation_name":"is_a","term_name":"decreased gene expression during nitrogen starvation","termid":"FYPO:0006550"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription during nitrogen starvation","synonyms":[{"name":"decreased transcription during cellular response to nitrogen starvation","type":"exact"},{"name":"decreased transcription during nitrogen depletion","type":"exact"},{"name":"decreased transcription during nitrogen deprivation","type":"exact"},{"name":"decreased transcription during nitrogen limitation","type":"exact"},{"name":"decreased transcription in response to nitrogen starvation","type":"exact"},{"name":"decreased transcriptional response to nitrogen starvation","type":"exact"},{"name":"reduced transcription during nitrogen starvation","type":"exact"}],"termid":"FYPO:0005118"}


id: GO:0051362
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a 2-tetrahydropyridinyl-5-imidazolinone protein chromophore cross-link from the alpha-carboxyl carbon of residue n, a lysine, to the alpha-amino nitrogen of residue n+2, a glycine, and a dehydration to form a double bond to the alpha-amino nitrogen of residue n+1. This cross-linking is coupled with a dehydrogenation of residue n+1 to form a double bond between the alpha and beta carbons. In addition, the residue N lysine undergoes cyclization. The alpha-amino nitrogen is replaced by the epsilon-amino nitrogen, the peptide chain is broken, residue N-1 is released as an amide, and a double bond is formed between the alpha-carbon and the nitrogen so that a tetrahydropyridine ring results. This modification is found in the GFP-like fluorescent chromoprotein FP538 from the sea anemone Zoanthus species.","definition_xrefs":["RESID:AA0382","PMID:15628861","PDB:1XAE","PMID:10504696"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via 2-tetrahydropyridinyl-5-imidazolinone glycine (obsolete GO:0051362)","synonyms":[{"name":"biosynthesis of protein-protein cross-link via 2-tetrahydropyridinyl-5-imidazolinone glycine","type":"exact"},{"name":"biosynthetic process of protein-protein cross-link via 2-tetrahydropyridinyl-5-imidazolinone glycine","type":"exact"}],"termid":"GO:0051362"}


id: FYPO:0000072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of benomyl than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to benomyl","synonyms":[{"name":"resistance to benomyl during mitotic cell cycle","type":"related"},{"name":"resistance to benomyl during vegetative growth","type":"exact"},{"name":"resistance to methyl [1-(butylcarbamoyl)-1H-benzimidazol-2-yl]carbamate","type":"exact"},{"name":"resistant to benomyl","type":"exact"}],"termid":"FYPO:0000072"}


id: GO:0090183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of kidney development. Kidney development is the process whose specific outcome is the progression of the kidney over time, from its formation to the mature structure. The kidney is an organ that filters the blood and excretes the end products of body metabolism in the form of urine.","definition_xrefs":["GOC:yaf","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"kidney development","termid":"GO:0001822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of kidney development","synonyms":[{"name":"regulation of nephrogenesis","type":"related"}],"termid":"GO:0090183"}


id: PBO:0051260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-67-2 (pseudogene)","termid":"PBO:0051260"}


id: MONDO:0002998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A meningioma that arises from the skull base.","definition_xrefs":["NCIT:C5272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skull base neoplasm","termid":"MONDO:0002785"},{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skull base meningioma","secondary_identifiers":["UMLS:C1335976","DOID:4437","MEDGEN:233449"],"synonyms":[{"name":"basicranium meningioma (disease)","type":"exact"},{"name":"meningioma (disease) of basicranium","type":"exact"},{"name":"meningioma of skull base","type":"related"},{"name":"meningioma of the skull base","type":"exact"},{"name":"skull base meningioma","type":"exact"}],"termid":"MONDO:0002998","xrefs":{"Monarch":{"xref_id":"0002998"}}}


id: PBO:0077667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF receptor superfamily member 13B","termid":"PBO:0077667"}


id: MONDO:0008973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chondrodysplasia punctata, Toriello type is a rare, non-rhizomelic, primary bone dysplasia syndrome characterized by calcific stippling of epiphyses in association with minor facial abnormalities, short stature and ocular colobomata. In addition, patients present chondrodysplasia punctata, brachycephaly, flat facial profile with small nose, flat lower eyelids and low-set ears, developmental delay, brachytelephalangy and deep palmar creases. Complex congenital cardiac disease and central nervous system anomalies (including partial absence of corpus callosum, small vermis, enlargement of the cisterna magna and/or of the anterior horns of the lateral ventricles) have been reported.","definition_xrefs":["Orphanet:79347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-rhizomelic chondrodysplasia punctata","termid":"MONDO:0015775"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia punctata, Toriello type","secondary_identifiers":["SCTID:715631005","UMLS:C1859132","GARD:16716","icd11.foundation:1167798993","MEDGEN:347071","OMIM:215105","MESH:C565853"],"synonyms":[{"name":"Toriello-Higgins-Miller syndrome","type":"exact"},{"name":"chondrodysplasia punctata syndrome","type":"related"}],"termid":"MONDO:0008973","xrefs":{"Monarch":{"xref_id":"0008973"}}}


id: PR:000027552
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H2A.2 that has been post-translationally modified to include at least one phosphorylated residue.","definition_xrefs":["PRO:CNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H2A.2","termid":"PR:000027545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2A.2 phosphorylated form","synonyms":[{"name":"HTA2/PhosRes+","type":"exact"}],"termid":"PR:000027552"}


id: PBO:0070699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L9 pseudogene 3","termid":"PBO:0070699"}


id: PBO:0026648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_catabolic_process_during_nitrogen_starvation","termid":"PBO:0026648"}


id: PBO:0081395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 234","termid":"PBO:0081395"}


id: PBO:0066049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP1 GTPase activating protein 2","termid":"PBO:0066049"}


id: MOD:00058
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-methionine to N-acetyl-L-methionine.","definition_xrefs":["PubMed:7944406","RESID:AA0049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-methionine residue","termid":"MOD:00913"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-methionine","synonyms":[{"name":"(2S)-2-acetamido-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"2-acetylamino-4-(methylthio)butanoic acid","type":"exact"},{"name":"2-acetylazanyl-4-(methylsulfanyl)butanoic acid","type":"exact"},{"name":"AcMet","type":"exact"},{"name":"MOD_RES N-acetylmethionine","type":"exact"},{"name":"N-acetyl-L-methionine","type":"exact"},{"name":"N-acetylated L-methionine","type":"exact"},{"name":"acetylmethionine","type":"exact"},{"name":"methionamine","type":"exact"}],"termid":"MOD:00058"}


id: MONDO:0007132
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anonychia-ectrodactyly","secondary_identifiers":["UMLS:C1862843","MEDGEN:354849","OMIM:106900","MESH:C566277"],"synonyms":[{"name":"anonychia ectrodactyly","type":"related"},{"name":"anonychia-ectrodactyly","type":"exact"}],"termid":"MONDO:0007132","xrefs":{"Monarch":{"xref_id":"0007132"}}}


id: PBO:0084634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Methyltransferase required for m3U2843 methylation of the 25S rRNA; S-adenosylmethionine-dependent; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm; YLR063W is not an essential gene","termid":"PBO:0084634"}


id: GO:1903322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein modification by small protein conjugation or removal.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-translational protein modification","termid":"GO:1901875"},{"relation_name":"is_a","term_name":"regulation of protein modification by small protein conjugation or removal","termid":"GO:1903320"},{"relation_name":"positively_regulates","term_name":"protein modification by small protein conjugation or removal","termid":"GO:0070647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein modification by small protein conjugation or removal","synonyms":[{"name":"activation of protein modification by small protein conjugation or removal","type":"narrow"},{"name":"up regulation of protein modification by small protein conjugation or removal","type":"exact"},{"name":"up-regulation of protein modification by small protein conjugation or removal","type":"exact"},{"name":"upregulation of protein modification by small protein conjugation or removal","type":"exact"}],"termid":"GO:1903322"}


id: MONDO:0005789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the liver in humans caused by hepatitis delta virus, a defective RNA virus that can only infect hepatitis B patients. For its viral coating, hepatitis delta virus requires the hepatitis B surface antigens produced by these patients. Hepatitis D can occur either concomitantly with (coinfection) or subsequent to (superinfection) hepatitis B infection. Similar to hepatitis B, it is primarily transmitted by parenteral exposure, such as transfusion of contaminated blood or blood products, but can also be transmitted via sexual or intimate personal contact.","definition_xrefs":["MESH:D003699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hepatitis","termid":"MONDO:0006011"},{"relation_name":"is_a","term_name":"post-viral disorder","termid":"MONDO:0021674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"hepatitis D virus infection","secondary_identifiers":["Orphanet:402823","ICD9:070.52","DOID:2047","EFO:0007304","MEDGEN:4182","GARD:21716","NORD:2020","SCTID:707341005","UMLS:C0011226"],"synonyms":[{"name":"HDV","type":"exact"},{"name":"Hepatitis D","type":"exact"},{"name":"Hepatitis D virus","type":"exact"},{"name":"Hepatitis delta virus caused hepatitis","type":"exact"},{"name":"Hepatitis delta virus hepatitis","type":"exact"},{"name":"delta hepatitis","type":"exact"},{"name":"hepatitis delta","type":"exact"},{"name":"hepatitis type D","type":"exact"}],"termid":"MONDO:0005789","xrefs":{"Monarch":{"xref_id":"0005789"}}}


id: GO:0034799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: TNP dihydride Meisenheimer complex (aci form) = TNP dihydride Meisenheimer complex (nitro form).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dihydride TNP tautomerase activity (obsolete GO:0034799)","termid":"GO:0034799"}


id: GO:0004528
data:
  {"annotated_genes":["SJAG_03994","SJAG_02298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69120,112001],"is_not":false,"summary":null,"term":"GO:0004528"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential hydrolytic removal of 5'-nucleotides from the 3'-hydroxy termini of 3'-hydroxy-terminated oligonucleotides.","definition_xrefs":["EC:3.1.4.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exonuclease activity","termid":"GO:0004527"},{"relation_name":"is_a","term_name":"phosphoric diester hydrolase activity","termid":"GO:0008081"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02298":null,"SJAG_03994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0004527","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"phosphodiesterase I activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.1.4.1-RXN"],"synonyms":[{"name":"5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"related"},{"name":"5'-NPDase activity","type":"related"},{"name":"5'-PDE activity","type":"related"},{"name":"5'-PDase activity","type":"related"},{"name":"5'-exonuclease activity","type":"related"},{"name":"5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"5'-phosphodiesterase activity","type":"related"},{"name":"5'NPDE activity","type":"related"},{"name":"PDE I activity","type":"related"},{"name":"alkaline phosphodiesterase activity","type":"related"},{"name":"exonuclease I activity","type":"related"},{"name":"nucleotide pyrophosphatase/phosphodiesterase I activity","type":"related"},{"name":"oligonucleate 5'-nucleotidohydrolase activity","type":"related"},{"name":"orthophosphoric diester phosphohydrolase activity","type":"related"},{"name":"phosphodiesterase activity","type":"broad"}],"termid":"GO:0004528","terms_by_termid":{"GO:0004528":null}}


id: GO:0102970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 7-deoxyloganetate = H+ + 7-deoxyloganate + UDP.","definition_xrefs":["EC:2.4.1.323","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"7-deoxyloganetic acid glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9372","RHEA:39895"],"termid":"GO:0102970"}


id: PBO:0114381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane carboxylic acid transmembrane transporter","termid":"PBO:0114381"}


id: GO:0031568
data:
  {"annotated_genes":["SJAG_00071","SJAG_03048","SJAG_01210","SJAG_01401","SJAG_03681"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90950,103639,104375,110930,117963],"is_not":false,"summary":null,"term":"GO:0031568"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during the G1/S transition of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell size control checkpoint signaling","termid":"GO:0031567"},{"relation_name":"is_a","term_name":"negative regulation of G1/S transition of mitotic cell cycle","termid":"GO:2000134"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_03048":null,"SJAG_03681":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0044772","GO:0023052","GO:0007049","GO:0008150"],"is_obsolete":false,"name":"mitotic G1 cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072450"],"synonyms":[{"name":"G1 cell size control checkpoint","type":"related"},{"name":"G1 cell size control checkpoint signalling","type":"related"},{"name":"mitotic G1 cell size control checkpoint","type":"exact"},{"name":"mitotic cell cycle G1/S transition size control checkpoint","type":"exact"},{"name":"signal transduction involved in G1 cell size control checkpoint","type":"related"},{"name":"signal transduction involved in mitotic cell cycle G1/S transition size control checkpoint","type":"related"}],"termid":"GO:0031568","terms_by_termid":{"GO:0031568":null}}


id: MONDO:1011515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glaucoma, primary closed-angle that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glaucoma, primary closed-angle, non-human animal","termid":"MONDO:1011458"},{"relation_name":"is_a","term_name":"glaucoma, dog","termid":"MONDO:1011510"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glaucoma, primary closed-angle, dog","secondary_identifiers":["OMIA:001871-9615"],"termid":"MONDO:1011515","xrefs":{"Monarch":{"xref_id":"1011515"}}}


id: GO:0060715
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a chorionic trophoblast cell acquires specialized features of a syncytiotrophoblast of the labyrinthine layer of the placenta.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"labyrinthine layer development","termid":"GO:0060711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"syncytiotrophoblast cell differentiation involved in labyrinthine layer development","termid":"GO:0060715"}


id: PBO:0074330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMARCA5 antisense RNA 1","termid":"PBO:0074330"}


id: PBO:0077081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOPBP1 interacting checkpoint and replication regulator","termid":"PBO:0077081"}


id: FYPO:0002266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more polysaccharides measured in the cell wall is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased polysaccharide level during vegetative growth","termid":"FYPO:0001080"},{"relation_name":"is_a","term_name":"decreased level of substance in cell wall during vegetative growth","termid":"FYPO:0002628"},{"relation_name":"output_of","term_name":"abnormal cell wall biogenesis","termid":"FYPO:0000174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cell wall polysaccharide level","synonyms":[{"name":"decreased cell wall polysaccharide accumulation","type":"related"},{"name":"decreased cell wall polysaccharide level during mitotic cell cycle","type":"related"},{"name":"decreased cell wall polysaccharide level during vegetative growth","type":"exact"},{"name":"reduced cell wall polysaccharide level","type":"exact"}],"termid":"FYPO:0002266"}


id: GO:0010545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binds to and modulates the activity of the molecular chaperone Hsp90.","definition_xrefs":["GOC:dph","GOC:tb","PMID:11146632"],"gene_count":0,"genotype_count":0,"name":"obsolete Hsp90 protein regulator activity (obsolete GO:0010545)","synonyms":[{"name":"Hsp90 protein regulator activity","type":"exact"}],"termid":"GO:0010545"}


id: PBO:0046942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 66 member D","termid":"PBO:0046942"}


id: MONDO:0008578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toe, rotated fifth","secondary_identifiers":["MEDGEN:348254","OMIM:189150","UMLS:C1861060"],"synonyms":[{"name":"toe, rotated fifth","type":"exact"}],"termid":"MONDO:0008578","xrefs":{"Monarch":{"xref_id":"0008578"}}}


id: PBO:0042413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 25C","termid":"PBO:0042413"}


id: PBO:0066699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"required for meiotic nuclear division 5 homolog B","termid":"PBO:0066699"}


id: PBO:0054219
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1600","termid":"PBO:0054219"}


id: _global:disposition_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"inverse of has disposition","direct_ancestors":[{"relation_name":"is_a","term_name":"characteristic_of","termid":"_global:characteristic_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disposition_of","secondary_identifiers":["RO:0000092"],"termid":"_global:disposition_of"}


id: FYPO:0006060
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the septin ring does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to cell cortex during vegetative growth","termid":"FYPO:0000930"},{"relation_name":"is_a","term_name":"abnormal protein localization to septin ring","termid":"FYPO:0006059"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"abolished protein localization to septin ring","synonyms":[{"name":"abolished protein localisation to septin ring","type":"exact"},{"name":"abolished protein localization to septin ring during mitotic cell cycle","type":"related"},{"name":"protein absent from septin ring","type":"related"},{"name":"protein localization to septin ring abolished","type":"exact"},{"name":"protein localization to septin ring abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0006060"}


id: GO:2001050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tendon cell differentiation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell differentiation","termid":"GO:0045596"},{"relation_name":"is_a","term_name":"regulation of tendon cell differentiation","termid":"GO:2001049"},{"relation_name":"negatively_regulates","term_name":"tendon cell differentiation","termid":"GO:0035990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tendon cell differentiation","synonyms":[{"name":"negative regulation of muscle attachment cell differentiation","type":"exact"},{"name":"negative regulation of tenocyte differentiation","type":"related"}],"termid":"GO:2001050"}


id: PBO:0040339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP5MC2 pseudogene 5","termid":"PBO:0040339"}


id: FYPO:0004956
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial RNA 3'-end processing is abnormal.","definition_xrefs":["PomBase:mah","PMID:18304578"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0000294","FYPO:0001985"],"is_obsolete":false,"name":"abnormal mitochondrial RNA 3'-end processing","synonyms":[{"name":"abnormal mitochondrial RNA 3' end processing","type":"exact"},{"name":"abnormal mitochondrial RNA 3'-end processing during mitotic cell cycle","type":"related"},{"name":"abnormal mitochondrial RNA 3'-end processing during vegetative growth","type":"exact"}],"termid":"FYPO:0004956"}


id: MONDO:0016812
data:
  {"annotated_genes":["SJAG_03098","SJAG_03275"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012994"},{"annotations":[87022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007495"}]},"cv_name":"mondo","definition":"Dopa-responsive dystonia (DRD) describes a group of neurometabolic disorders characterized by dystonia that typically shows diurnal fluctuations, that responds excellently to levodopa (L-dopa) and that is comprised of autosomal dominant dopa-responsive dystonia (DYT5a), autosomal recessive dopa-responsive dystonia (DYT5b) and dopa responsive dystonia due to sepiapterin reductase (SR) deficiency.","definition_xrefs":["Orphanet:255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03098":null,"SJAG_03275":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"dopa-responsive dystonia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200516","NCIT:C116719","SCTID:230332007","MESH:C538007","icd11.foundation:1534901505","GARD:12144","NANDO:2200885"],"synonyms":[{"name":"DYT-GCH1 (subtype)","type":"related"},{"name":"DYT-SPR (subtype)","type":"related"},{"name":"DYT-TH (subtype)","type":"related"},{"name":"DYT5","type":"related"},{"name":"DYT5 dystonia","type":"exact"},{"name":"HPD with diurnal fluctuation","type":"exact"},{"name":"Segawa's disease","type":"exact"},{"name":"dopa-responsive dystonia","type":"exact"},{"name":"hereditary progressive dystonia with diurnal fluctuation","type":"exact"}],"termid":"MONDO:0016812","terms_by_termid":{"MONDO:0007495":null,"MONDO:0012994":null},"xrefs":{"Monarch":{"xref_id":"0016812"}}}


id: PBO:0069243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 498, pseudogene","termid":"PBO:0069243"}


id: PBO:0081650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 575","termid":"PBO:0081650"}


id: PBO:0017735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conjugation protein Prm1","termid":"PBO:0017735"}


id: PR:O13647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC8D2.11 gene.","definition_xrefs":["UniProtKB:O13647","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C8D2.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.11","synonyms":[{"name":"Spom972h-SPBC8D2.11","type":"exact"}],"termid":"PR:O13647"}


id: PBO:0121058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF519 antisense RNA 1","termid":"PBO:0121058"}


id: PBO:0061674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 62","termid":"PBO:0061674"}


id: PBO:0078605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 18","termid":"PBO:0078605"}


id: GO:0031798
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 metabotropic glutamate receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled glutamate receptor binding","termid":"GO:0035256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"type 1 metabotropic glutamate receptor binding","synonyms":[{"name":"type 1 metabotropic glutamate receptor ligand","type":"narrow"}],"termid":"GO:0031798"}


id: PBO:0001135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L13 (predicted)","termid":"PBO:0001135"}


id: GO:1903667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of chemorepellent activity.","definition_xrefs":["PMID:22711818","GOC:TermGenie","GO_REF:0000059","PMID:24390142"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of chemorepellent activity (obsolete GO:1903667)","synonyms":[{"name":"regulation of chemorepellant activity","type":"exact"}],"termid":"GO:1903667"}


id: MONDO:0013015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Brugada syndrome in which the cause of the disease is a mutation in the SCN1B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Brugada syndrome","termid":"MONDO:0015263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"Brugada syndrome 5","secondary_identifiers":["DOID:0110222","MEDGEN:411607","GARD:15584","OMIM:612838","UMLS:C2748541"],"synonyms":[{"name":"BRGDA5","type":"exact"},{"name":"Brugada syndrome 5","type":"exact"},{"name":"Brugada syndrome caused by mutation in SCN1B","type":"exact"},{"name":"Brugada syndrome type 5","type":"exact"},{"name":"Cardiac conduction defect, nonspecific","type":"related"},{"name":"SCN1B Brugada syndrome","type":"exact"}],"termid":"MONDO:0013015","xrefs":{"Monarch":{"xref_id":"0013015"}}}


id: PBO:0028839
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_transcript_length","termid":"PBO:0028839"}


id: MONDO:0022089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Carnevale hernandez castillo syndrome","secondary_identifiers":["UMLS:C2930940","MESH:C535585","MEDGEN:419672"],"synonyms":[{"name":"Triphalyngeal thumbs and brachyectrodactyly","type":"related"}],"termid":"MONDO:0022089","xrefs":{"Monarch":{"xref_id":"0022089"}}}


id: GO:0060654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the mammary gland sprout grows along its axis.","definition_xrefs":["PMID:12558599","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation involved in mammary gland duct branching","termid":"GO:0060751"},{"relation_name":"part_of","term_name":"mammary gland cord morphogenesis","termid":"GO:0060652"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland cord elongation","termid":"GO:0060654"}


id: GO:0070707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of a dinucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA dinucleotide insertion","termid":"GO:0070707"}


id: MOD:01083
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-benzyl-L-serine.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"benzyl (Bzl) and benzyl ester (OBzl) modified residue","termid":"MOD:01008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-benzyl-L-serine","termid":"MOD:01083"}


id: MONDO:0021153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic and acquired (obsolete MONDO:0021153)","synonyms":[{"name":"somatic genetic","type":"related"}],"termid":"MONDO:0021153","xrefs":{"Monarch":{"xref_id":"0021153"}}}


id: PBO:0116269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Highly-conserved N-terminally anchored AAA-ATPase; distributed in the mitochondrial outer membrane and peroxisomes; involved in mitochondrial protein sorting; ATP-driven extractase that pulls mislocalized tail-anchored proteins into the cytosol, passing them to the GET pathway for transfer to the ER membrane for degradation, ensuring fidelity of organelle-specific localization of tail-anchored proteins; contains an N-terminal transmembrane domain and C-terminal cytoplasmic ATPase domain","termid":"PBO:0116269"}


id: SO:0001912
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant where copies of a feature are decreased relative to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"copy_number_change","termid":"SO:0001563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copy_number_decrease","synonyms":[{"name":"copy number decrease","type":"exact"}],"termid":"SO:0001912"}


id: GO:0016674
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a sulfur-containing group acts as a hydrogen or electron donor and reduces an acceptor other than quinone or a related compound, oxygen, NAD, NADP, an iron-sulfur protein, disulfide or a cytochrome.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on sulfur group of donors, other acceptors (obsolete GO:0016674)","synonyms":[{"name":"oxidoreductase activity, acting on sulfur group of donors, other acceptors","type":"exact"},{"name":"oxidoreductase activity, acting on sulphur group of donors, other acceptors","type":"exact"}],"termid":"GO:0016674"}


id: MONDO:1011228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Entropion that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entropion, non-human animal","termid":"MONDO:1010323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"entropion, pig","secondary_identifiers":["OMIA:000337-9823"],"termid":"MONDO:1011228","xrefs":{"Monarch":{"xref_id":"1011228"}}}


id: GO:0033791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA + H2O + acceptor = (24R,25R)-3alpha,7alpha,12alpha,24-tetrahydroxy-5beta-cholestan-26-oyl-CoA + reduced acceptor.","definition_xrefs":["EC:1.17.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups","termid":"GO:0016725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA 24-hydroxylase activity","secondary_identifiers":["RHEA:15733","MetaCyc:1.17.99.3-RXN"],"synonyms":[{"name":"(25R)-3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oyl-CoA:acceptor 24-oxidoreductase (24R-hydroxylating) activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestan-26-oate 24-hydroxylase activity","type":"related"},{"name":"3alpha,7alpha,12alpha-trihydroxy-5beta-cholestanoyl-CoA oxidase activity","type":"related"},{"name":"THC-CoA oxidase activity","type":"related"},{"name":"THCA-CoA oxidase activity","type":"related"},{"name":"trihydroxycoprostanoyl-CoA oxidase activity","type":"related"}],"termid":"GO:0033791"}


id: PBO:0056297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 1 light chain 3 beta","termid":"PBO:0056297"}


id: MONDO:0021655
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cutaneous mucinosis","termid":"MONDO:0002523"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"secondary catabolic mucinosis of skin","secondary_identifiers":["MEDGEN:697525","ICD9:701.8","SCTID:402723003","UMLS:C1274173"],"termid":"MONDO:0021655","xrefs":{"Monarch":{"xref_id":"0021655"}}}


id: MONDO:0975798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"methylmalonic aciduria and homocystinuria","termid":"MONDO:0016826"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"methylmalonic aciduria and homocystinuria, cb1L type","secondary_identifiers":["OMIM:620940"],"termid":"MONDO:0975798","xrefs":{"Monarch":{"xref_id":"0975798"}}}


id: PBO:0067961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 263","termid":"PBO:0067961"}


id: MONDO:0006406
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant epithelial neoplasm characterized by the presence of spindle cells and anaplastic morphologic features. Giant cells and a sarcomatous component may also be present.","definition_xrefs":["NCIT:C27004"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"carcinoma","termid":"MONDO:0004993"},{"relation_name":"is_a","term_name":"anaplastic cancer","termid":"MONDO:0020633"},{"relation_name":"is_a","term_name":"malignant spindle cell neoplasm","termid":"MONDO:0020663"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcomatoid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICDO:8033/3","MEDGEN:60009","UMLS:C0205697","EFO:1000520","ICDO:8032/3","DOID:4015"],"synonyms":[{"name":"carcinoma, spindle cell, malignant","type":"exact"},{"name":"pseudosarcomatous carcinoma","type":"exact"},{"name":"sarcomatoid carcinoma","type":"exact"},{"name":"spindle cell carcinoma","type":"exact"},{"name":"spindle cell carcinoma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0006406","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0006406"}}}


id: PBO:0030061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_spindle_pole_body","termid":"PBO:0030061"}


id: GO:0030438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete MAPKKK cascade during sporulation (sensu Fungi) (obsolete GO:0030438)","synonyms":[{"name":"MAPKKK cascade during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030438"}


id: MONDO:0019118
data:
  {"annotated_genes":["SJAG_04497","SJAG_00531","SJAG_01526","SJAG_04745","SJAG_04296","SJAG_03592","SJAG_05342","SJAG_01356","SJAG_02295","SJAG_01152","SJAG_03258","SJAG_04529","SJAG_01756","SJAG_02063","SJAG_02163","SJAG_04681","SJAG_02623","SJAG_01897","SJAG_02889","SJAG_00737","SJAG_04003","SJAG_02947","SJAG_03827","SJAG_01298","SJAG_02885","SJAG_04495","SJAG_00643","SJAG_02712","SJAG_04334","SJAG_02150","SJAG_03557","SJAG_01634","SJAG_00742","SJAG_01630","SJAG_00495","SJAG_02946","SJAG_01998","SJAG_02955","SJAG_03588","SJAG_03795","SJAG_04225","SJAG_01422","SJAG_04637"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89296,89297],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012419"},{"annotations":[88585],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012099"},{"annotations":[88920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010557"},{"annotations":[88416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014372"},{"annotations":[87064],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014669"},{"annotations":[88427,88428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013802"},{"annotations":[88903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013454"},{"annotations":[87426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012990"},{"annotations":[88961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032794"},{"annotations":[87604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012056"},{"annotations":[87082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060650"},{"annotations":[89265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009624"},{"annotations":[88457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007918"},{"annotations":[89067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"},{"annotations":[88306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008379"},{"annotations":[88055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010828"},{"annotations":[88195],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010806"},{"annotations":[88111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011075"},{"annotations":[89189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010723"},{"annotations":[88660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012363"},{"annotations":[87030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012477"},{"annotations":[88745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013468"},{"annotations":[87444],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013516"},{"annotations":[87821,87822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013611"},{"annotations":[87805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014256"},{"annotations":[88578,88580,88574,88582,88576,88579,88581,88575,88577],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014323"},{"annotations":[88259],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014400"},{"annotations":[88824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015013"},{"annotations":[88699,88698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044320"},{"annotations":[88221],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032604"},{"annotations":[87556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031007"},{"annotations":[88083,88082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010819"}]},"cv_name":"mondo","definition":"An instance of retinal degeneration that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration","termid":"MONDO:0004580"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"},{"relation_name":"is_a","term_name":"hereditary neurological 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retinal dystrophy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:71862","HP:0000556","ICD10CM:H35.5","MEDGEN:208903","MESH:D058499","MedDRA:10038857","DOID:8501","DOID:8500","ICD9:362.72","NCIT:C35625","GARD:18916","ICD9:362.70","NCIT:C35194","ICD9:362.75","SCTID:314407005","ICD9:362.7","SCTID:41799005","UMLS:C0854723"],"synonyms":[{"name":"familial retinal dystrophy","type":"exact"},{"name":"fundus dystrophy","type":"broad"},{"name":"genetic retinal dystrophy","type":"exact"},{"name":"hereditary retinal degeneration","type":"exact"},{"name":"hereditary retinal dystrophy","type":"exact"},{"name":"inherited retinal dystrophy","type":"exact"},{"name":"retinal dystrophy","type":"exact"}],"termid":"MONDO:0019118","terms_by_termid":{"MONDO:0007918":null,"MONDO:0008379":null,"MONDO:0009624":null,"MONDO:0009796":null,"MONDO:0010557":null,"MONDO:0010723":null,"MONDO:0010806":null,"MONDO:0010819":null,"MONDO:0010828":null,"MONDO:0011075":null,"MONDO:0012056":null,"MONDO:0012099":null,"MONDO:0012363":null,"MONDO:0012419":null,"MONDO:0012477":null,"MONDO:0012990":null,"MONDO:0013454":null,"MONDO:0013468":null,"MONDO:0013516":null,"MONDO:0013611":null,"MONDO:0013802":null,"MONDO:0014256":null,"MONDO:0014323":null,"MONDO:0014372":null,"MONDO:0014400":null,"MONDO:0014669":null,"MONDO:0015013":null,"MONDO:0031007":null,"MONDO:0032604":null,"MONDO:0032794":null,"MONDO:0044320":null,"MONDO:0060650":null},"xrefs":{"Monarch":{"xref_id":"0019118"}}}


id: PBO:0042248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-C motif chemokine receptor 10","termid":"PBO:0042248"}


id: PBO:0090255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L27","termid":"PBO:0090255"}


id: PBO:0091057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L54","termid":"PBO:0091057"}


id: PBO:0090271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L6","termid":"PBO:0090271"}


id: PBO:0005266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome maturation factor Ump1 (predicted)","termid":"PBO:0005266"}


id: GO:0015348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete prostaglandin/thromboxane transporter activity (obsolete GO:0015348)","synonyms":[{"name":"prostaglandin/thromboxane transporter activity","type":"exact"}],"termid":"GO:0015348"}


id: PR:O74422
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A charged multivesicular body protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04731","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C162.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.06c","secondary_identifiers":["UniProtKB:O74422"],"synonyms":[{"name":"Spom972h-CHMP5","type":"exact"}],"termid":"PR:O74422"}


id: PBO:0003623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 adaptor complex subunit Alp3 (predicted)","termid":"PBO:0003623"}


id: FYPO:0003099
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which heterochromatin assembly is normal (i.e. indistinguishable from wild type). Heterochromatin assembly is the assembly of chromatin into a compact and highly condensed form that is often, but not always, transcriptionally silent.","definition_xrefs":["GO:0031507","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin organization during vegetative growth","termid":"FYPO:0002891"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal heterochromatin assembly","synonyms":[{"name":"normal heterochromatin assembly during mitotic cell cycle","type":"related"},{"name":"normal heterochromatin assembly during vegetative growth","type":"exact"},{"name":"normal heterochromatin formation","type":"exact"}],"termid":"FYPO:0003099"}


id: PATO:0002442
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface feature shape in which the bearer's surface is lacking ridges, pits, rugosity or other surface structures.","definition_xrefs":["PATOC:AD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornamentation","termid":"PATO:0002440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unornamented","termid":"PATO:0002442"}


id: GO:0071684
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process in which an organism emerges from a surrounding protective structure such as an egg or pupa case.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"organism emergence from protective structure","termid":"GO:0071684"}


id: GO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Low molecular weight (10-45 kDa) proteins that associate with intermediate filaments by lateral binding of the filaments and have the effect of creating tight macrofilament aggregates.","definition_xrefs":["GOC:ajp","PMID:9484600"],"gene_count":0,"genotype_count":0,"name":"obsolete type I intermediate filament associated protein (obsolete GO:0001722)","synonyms":[{"name":"type I intermediate filament associated protein","type":"exact"}],"termid":"GO:0001722"}


id: PBO:0018145
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA guanylyltransferase Thg1 (predicted)","termid":"PBO:0018145"}


id: MONDO:0019266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"SAPHO syndrome (acronym for Synovitis, Acne, Pustulosis, Hyperostosis and Osteitis) is an auto-inflammatory disease, mainly characterized by the association of neutrophilic cutaneous involvement and chronic osteomyelitis.","definition_xrefs":["Orphanet:793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SAPHO syndrome","secondary_identifiers":["EFO:1001164","MEDGEN:120490","NCIT:C119049","UMLS:C0263859","MESH:D020083","SCTID:60684003","DOID:13677","icd11.foundation:1901494067","ICD9:706.1","MedDRA:10051316","GARD:7606"],"synonyms":[{"name":"PPHS","type":"exact"},{"name":"Pustulo-psoriatic hyperostotic Spondyloarthritis","type":"exact"},{"name":"acquired hyperostosis syndrome","type":"related"},{"name":"synovitis acne pustulosis hyperostosis osteitis","type":"related"},{"name":"synovitis, acne, Pustlosis, hyperostosis, and osteomyelitis","type":"related"},{"name":"synovitis, acne, pustulosis palmaris, hyperostosis, osteomyelitis syndrome","type":"exact"},{"name":"synovitis, acne, pustulosis, hyperostosis, and osteitis syndrome","type":"exact"},{"name":"synovitis-acne-pustulosis-hyperostosis-osteitis syndrome","type":"exact"}],"termid":"MONDO:0019266","xrefs":{"Monarch":{"xref_id":"0019266"}}}


id: MONDO:1010022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"heart disorder, non-human animal","termid":"MONDO:1012982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, non-human animal","secondary_identifiers":["OMIA:001041"],"termid":"MONDO:1010022","xrefs":{"Monarch":{"xref_id":"1010022"}}}


id: FYPO:0001506
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylcholine measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"normal cellular phosphatidylcholine level","synonyms":[{"name":"normal cellular PC level","type":"exact"},{"name":"normal cellular phosphatidylcholine accumulation","type":"related"},{"name":"normal cellular phosphatidylcholine level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylcholine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001506"}


id: PBO:0052655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 23","termid":"PBO:0052655"}


id: GO:0010223
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that gives rise to secondary (or auxiliary or axillary) shoots in plants. This process pertains to the initial formation of a structure from unspecified parts. These secondary shoots originate from secondary meristems initiated in the axils of leaf primordia. Axillary meristems function like the shoot apical meristem of the primary shoot initiating the development of lateral organs.","definition_xrefs":["GOC:tb","PMID:12815068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of a branching structure","termid":"GO:0001763"},{"relation_name":"is_a","term_name":"shoot axis formation","termid":"GO:0010346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"secondary shoot formation","synonyms":[{"name":"auxiliary shoot formation","type":"related"},{"name":"axillary shoot formation","type":"related"},{"name":"axillary shoot system formation","type":"exact"},{"name":"shoot branching","type":"related"}],"termid":"GO:0010223"}


id: GO:0047900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + formate = ADP + formyl phosphate + H+.","definition_xrefs":["EC:2.7.2.6","RHEA:16009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016301","GO:0003674"],"is_obsolete":false,"name":"formate kinase activity","secondary_identifiers":["KEGG_REACTION:R00518","MetaCyc:FORMATE-KINASE-RXN"],"synonyms":[{"name":"ATP:formate phosphotransferase activity","type":"related"}],"termid":"GO:0047900"}


id: MONDO:0016551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital primary megaureter","termid":"MONDO:0018960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"congenital primary megaureter, refluxing form","secondary_identifiers":["icd11.foundation:1229028805","Orphanet:238650","UMLS:C5680935","MEDGEN:1842549","GARD:20641"],"termid":"MONDO:0016551","xrefs":{"Monarch":{"xref_id":"0016551"}}}


id: MONDO:0018095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Weaver-Williams syndrome is a multiple congenital anomalies syndrome characterized by moderate-to-severe intellectual disability, decreased muscle mass, microcephaly, facial dysmorphism (prominent ears, midfacial hypoplasia, small mouth and cleft palate), clinodactyly of the fingers, delayed osseous maturation and generalized bone hypoplasia. The syndrome has been described in a brother and sister and an autosomal recessive mode of inheritance has been suggested. There have been no further descriptions in the literature since 1977.","definition_xrefs":["Orphanet:3448"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Weaver-Williams syndrome","secondary_identifiers":["GARD:5545","MEDGEN:1392915","UMLS:C0796198"],"termid":"MONDO:0018095","xrefs":{"Monarch":{"xref_id":"0018095"}}}


id: PBO:0091075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial single stranded DNA specific 5'-3' exodeoxyribonuclease Exo5","termid":"PBO:0091075"}


id: GO:0060795
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to specific cell fates of the endoderm, ectoderm, or mesoderm as a part of gastrulation.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"formation of primary germ layer","termid":"GO:0001704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell fate commitment involved in formation of primary germ layer","termid":"GO:0060795"}


id: GO:0036002
data:
  {"annotated_genes":["SJAG_03383","SJAG_03448","SJAG_04117","SJAG_03983","SJAG_04898","SJAG_02622","SJAG_00058","SJAG_03995","SJAG_00225","SJAG_00249","SJAG_01200","SJAG_04497"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79435,79870,91093],"is_not":false,"summary":null,"term":"GO:0036002"},{"annotations":[58064,78581,74156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030628"},{"annotations":[81342,115336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030627"},{"annotations":[66820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045131"},{"annotations":[102932,120199,77994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097157"}]},"cv_name":"molecular_function","definition":"Binding to a pre-messenger RNA (pre-mRNA), an intermediate molecule between DNA and protein that may contain introns and, at least in part, encodes one or more proteins. Introns are removed from pre-mRNA to form a mRNA molecule.","definition_xrefs":["GOC:bf","GOC:kmv","PMID:21901112","SO:0000120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_01200":null,"SJAG_02622":null,"SJAG_03383":null,"SJAG_03448":null,"SJAG_03983":null,"SJAG_03995":null,"SJAG_04117":null,"SJAG_04497":null,"SJAG_04898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"pre-mRNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"protein-coding primary transcript binding","type":"related"}],"termid":"GO:0036002","terms_by_termid":{"GO:0030627":null,"GO:0030628":null,"GO:0036002":null,"GO:0045131":null,"GO:0097157":null}}


id: PBO:0083203
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; completely overlaps the verified gene YFR009W; identified by expression profiling and mass spectrometry","termid":"PBO:0083203"}


id: MONDO:0021206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of non-suppurative otitis media.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-suppurative otitis media","termid":"MONDO:0001212"},{"relation_name":"is_a","term_name":"chronic otitis media","termid":"MONDO:0021204"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic non-suppurative otitis media","secondary_identifiers":["UMLS:C0395869","ICD9:381.3","SCTID:232254004","MEDGEN:583104"],"synonyms":[{"name":"non-suppurative otitis media, chronic","type":"exact"}],"termid":"MONDO:0021206","xrefs":{"Monarch":{"xref_id":"0021206"}}}


id: PBO:0000808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT family","termid":"PBO:0000808"}


id: PBO:0084772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ornithine acetyltransferase; catalyzes the fifth step in arginine biosynthesis; also possesses acetylglutamate synthase activity, regenerates acetylglutamate while forming ornithine","termid":"PBO:0084772"}


id: PBO:0062174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 17","termid":"PBO:0062174"}


id: PBO:0085083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear encoded protein needed for splicing of mitochondrial intron; required for efficient splicing of mitochondrial COX1 aI5beta intron; mss18 mutations block cleavage of 5' exon - intron junction; phenotype of intronless strain suggests additional functions","termid":"PBO:0085083"}


id: PBO:0063450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphodiesterase 8B","termid":"PBO:0063450"}


id: PBO:0061680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin 98 and 96 precursor","termid":"PBO:0061680"}


id: GO:0010697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of the process involving the release of duplicated mitotic spindle pole bodies (SPBs) and their migration away from each other within the nuclear membrane.","definition_xrefs":["GOC:dph","PMID:18500339","GOC:tb","PMID:16792804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic spindle pole body separation","termid":"GO:0010695"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"negatively_regulates","term_name":"initial mitotic spindle pole body separation","termid":"GO:0000073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of mitotic spindle pole body separation","synonyms":[{"name":"negative regulation of SPB separation","type":"exact"}],"termid":"GO:0010697"}


id: PBO:0074851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 38D","termid":"PBO:0074851"}


id: MONDO:0010111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Odontotrichomelic syndrome is characterized by malformations of all four extremities, hypoplastic nails, ear anomalies, hypotrichosis, abnormal dentition, hyperhidrosis and nasolacrimal duct obstruction. So far, it has been described in less than 10 patients. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:2723"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"odontotrichomelic syndrome","secondary_identifiers":["GARD:2381","OMIM:273400","SCTID:239028001","UMLS:C2930960","MEDGEN:443944","icd11.foundation:1999951139","MESH:C535637"],"synonyms":[{"name":"Freire-Maia odontotrichomelic syndrome","type":"exact"},{"name":"Freire-Maia syndrome","type":"exact"},{"name":"odontotrichomelic hypohidrotic dysplasia","type":"exact"},{"name":"odontotrichomelic syndrome","type":"exact"},{"name":"tetramelic deficiencies, ectodermal dysplasia, deformed ears, and other abnormalities","type":"exact"}],"termid":"MONDO:0010111","xrefs":{"Monarch":{"xref_id":"0010111"}}}


id: PBO:0063110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate androgen-regulated mucin-like protein 1","termid":"PBO:0063110"}


id: MONDO:0000437
data:
  {"annotated_genes":["SJAG_04418","SJAG_02242","SJAG_01317","SJAG_00380","SJAG_04641","SJAG_04622","SJAG_01438","SJAG_02377","SJAG_03720","SJAG_02084","SJAG_02457","SJAG_00645","SJAG_03393","SJAG_00863","SJAG_01945","SJAG_01356","SJAG_02680","SJAG_00059","SJAG_02119","SJAG_00933","SJAG_02196","SJAG_04822","SJAG_01286","SJAG_00421","SJAG_05332","SJAG_04233","SJAG_04533","SJAG_03862","SJAG_00526","SJAG_03923","SJAG_01179","SJAG_01168","SJAG_00686","SJAG_00087","SJAG_01400","SJAG_03692","SJAG_02885","SJAG_05212"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[87407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[87383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[88784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[88289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[89035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[88695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[87142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[87257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[88437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[86981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[88151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[88773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[87522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[89111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[87882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[87660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[87225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[87735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[89275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[87175,87176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[87161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[87623,87622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[87815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[88272,88271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[89162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"},{"annotations":[87402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[87472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[88548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[88308,88307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[88314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[87580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[88598,88599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[87595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[87726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"A neurological syndrome characterized by clumsy and uncoordinated movement of the limbs, trunk, and cranial muscles. It results from pathology in the cerebellum and its connections, or in the proprioceptive sensory pathways.","direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"cerebellar degeneration","termid":"MONDO:0022687"},{"relation_name":"is_a","term_name":"atactic disorder","termid":"MONDO:0100308"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00087":null,"SJAG_00380":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00645":null,"SJAG_00686":null,"SJAG_00863":null,"SJAG_00933":null,"SJAG_01168":null,"SJAG_01179":null,"SJAG_01286":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01400":null,"SJAG_01438":null,"SJAG_01945":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02242":null,"SJAG_02377":null,"SJAG_02457":null,"SJAG_02680":null,"SJAG_02885":null,"SJAG_03393":null,"SJAG_03692":null,"SJAG_03720":null,"SJAG_03862":null,"SJAG_03923":null,"SJAG_04233":null,"SJAG_04418":null,"SJAG_04533":null,"SJAG_04622":null,"SJAG_04641":null,"SJAG_04822":null,"SJAG_05212":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"cerebellar ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:1200037","NANDO:2100238","DOID:0050753","MEDGEN:849","NANDO:2200882","NCIT:C82341","ICD9:334.3","Orphanet:102002","MESH:D002524","UMLS:C0007758","SCTID:85102008","GARD:19816"],"synonyms":[{"name":"ataxia","type":"related"},{"name":"ataxia syndrome","type":"exact"},{"name":"ataxia, cerebellar","type":"related"},{"name":"ataxias, cerebellar","type":"related"},{"name":"cerebellar ataxias","type":"exact"},{"name":"cerebellar dysmetria","type":"related"},{"name":"cerebellar dysmetrias","type":"related"},{"name":"rare ataxia","type":"related"},{"name":"spinocerebellar ataxia","type":"exact"},{"name":"spinocerebellar degeneration","type":"exact"}],"termid":"MONDO:0000437","terms_by_termid":{"MONDO:0007574":null,"MONDO:0008458":null,"MONDO:0008840":null,"MONDO:0008943":null,"MONDO:0010524":null,"MONDO:0010547":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011402":null,"MONDO:0011439":null,"MONDO:0011781":null,"MONDO:0011801":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0012784":null,"MONDO:0013392":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014104":null,"MONDO:0014417":null,"MONDO:0014503":null,"MONDO:0014557":null,"MONDO:0014601":null,"MONDO:0014744":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0018996":null,"MONDO:0030312":null,"MONDO:0030318":null,"MONDO:0030323":null,"MONDO:0032923":null,"MONDO:0033115":null,"MONDO:0044720":null,"MONDO:0100340":null,"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0000437"}}}


id: MONDO:0003372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the vulva. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C40318"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"},{"relation_name":"is_a","term_name":"vulva sarcoma","termid":"MONDO:0005214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar leiomyosarcoma","secondary_identifiers":["UMLS:C2168304","DOID:5286","EFO:1001975","MEDGEN:378348"],"synonyms":[{"name":"leiomyosarcoma of mammalian vulva","type":"exact"},{"name":"mammalian vulva leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003372","xrefs":{"Monarch":{"xref_id":"0003372"}}}


id: PBO:0001342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-actin capping protein beta subunit (predicted)","termid":"PBO:0001342"}


id: PBO:0065718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 4","termid":"PBO:0065718"}


id: PBO:0076894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 48","termid":"PBO:0076894"}


id: GO:0036055
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N(6)-succinyl-L-lysyl-[protein] + NAD+ + H2O = 2''-O-succinyl-ADP-D-ribose + nicotinamide + L-lysyl-[protein].","definition_xrefs":["RHEA:47668","PMID:22076378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NAD-dependent protein lysine deacylase activity","termid":"GO:0141218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674","GO:0140096"],"is_obsolete":false,"name":"protein-succinyllysine desuccinylase activity","synonyms":[{"name":"peptidyl-succinyllysine desuccinylase activity","type":"exact"},{"name":"succinyl lysine desuccinylase activity","type":"broad"},{"name":"succinyllysine desuccinylase activity","type":"broad"}],"termid":"GO:0036055"}


id: GO:0044617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism initiates, promotes, or enhances the relaxation of smooth muscle in another organism via the action of a venom.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated perturbation of muscle system process","termid":"GO:0140137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated smooth muscle relaxation","synonyms":[{"name":"modulation of relaxation of smooth muscle in another organism","type":"related"},{"name":"modulation of relaxation of smooth muscle in other organism","type":"exact"},{"name":"regulation of relaxation of smooth muscle in other organism","type":"exact"}],"termid":"GO:0044617"}


id: GO:0043297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of an apical junction, a functional unit located near the cell apex at the points of contact between epithelial cells composed of the tight junction, the zonula adherens junction and the desmosomes, by the aggregation, arrangement and bonding together of its constituents.","definition_xrefs":["PMID:10854689","GOC:go_curators","PMID:14729475","PMID:15196556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction assembly","termid":"GO:0007043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"apical junction assembly","synonyms":[{"name":"apical junction complex assembly","type":"exact"}],"termid":"GO:0043297"}


id: GO:1990347
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of adenine misinserted into nascent strand opposite 8-oxoG in the template by adenine DNA glycosylase activity. The reaction leaves an apyrimidinic (AP) site.","definition_xrefs":["PMID:24559510"],"gene_count":0,"genotype_count":0,"name":"obsolete G*/A mismatch-specific adenine-DNA glycosylase activity (obsolete GO:1990347)","synonyms":[{"name":"G*/A mismatch-specific adenine-DNA glycosylase activity","type":"exact"}],"termid":"GO:1990347"}


id: PBO:0029680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_telomeres","termid":"PBO:0029680"}


id: GO:0030488
data:
  {"annotated_genes":["SJAG_04848","SJAG_05249","SJAG_00886","SJAG_01261","SJAG_02386","SJAG_00255","SJAG_01269","SJAG_05334","SJAG_04993","SJAG_02099","SJAG_04890","SJAG_04736","SJAG_04181","SJAG_01314","SJAG_04453","SJAG_02042","SJAG_04367","SJAG_01375","SJAG_02637","SJAG_00499","SJAG_04649","SJAG_02352","SJAG_02302","SJAG_00325","SJAG_03367","SJAG_04735","SJAG_04680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64186,74353,74415,74746,75640,76102,77324,77862,78173,96712,98238,100084],"is_not":false,"summary":null,"term":"GO:0030488"},{"annotations":[80039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[69274,59692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106004"},{"annotations":[108802,112204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106217"},{"annotations":[92464,107807],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002946"},{"annotations":[73095,80035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002939"},{"annotations":[106153,75225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002940"},{"annotations":[116879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002128"},{"annotations":[90270,95938],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002127"},{"annotations":[99859,104907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0002130"}]},"cv_name":"biological_process","definition":"The posttranscriptional addition of methyl groups to specific residues in a tRNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"tRNA modification","termid":"GO:0006400"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00255":null,"SJAG_00325":null,"SJAG_00499":null,"SJAG_00886":null,"SJAG_01261":null,"SJAG_01269":null,"SJAG_01314":null,"SJAG_01375":null,"SJAG_02042":null,"SJAG_02099":null,"SJAG_02302":null,"SJAG_02352":null,"SJAG_02386":null,"SJAG_02637":null,"SJAG_03367":null,"SJAG_04181":null,"SJAG_04367":null,"SJAG_04453":null,"SJAG_04649":null,"SJAG_04680":null,"SJAG_04735":null,"SJAG_04736":null,"SJAG_04848":null,"SJAG_04890":null,"SJAG_04993":null,"SJAG_05249":null,"SJAG_05334":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"tRNA methylation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0030488","terms_by_termid":{"GO:0002127":null,"GO:0002128":null,"GO:0002130":null,"GO:0002939":null,"GO:0002940":null,"GO:0002946":null,"GO:0030488":null,"GO:0070901":null,"GO:0106004":null,"GO:0106217":null}}


id: PR:Q9UTI7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thymidylate synthase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11549:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thymidylate synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.04","secondary_identifiers":["UniProtKB:Q9UTI7"],"synonyms":[{"name":"Spom972h-TYMS","type":"exact"},{"name":"TS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"TSase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTI7"}


id: GO:0032653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-10 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-10 production","termid":"GO:0032613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of interleukin-10 production","secondary_identifiers":["GO:0045074","GO:2001179"],"synonyms":[{"name":"regulation of IL-10 production","type":"exact"},{"name":"regulation of interleukin-10 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-10 secretion","type":"narrow"}],"termid":"GO:0032653"}


id: PBO:0089638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Adg3","termid":"PBO:0089638"}


id: GO:0052503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of the symbiont calcium-dependent protein kinase pathway during the symbiont defense response. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway (obsolete GO:0052503)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont calcium-dependent protein kinase pathway","type":"exact"},{"name":"positive regulation of defense-related symbiont CDPK pathway by organism","type":"exact"}],"termid":"GO:0052503"}


id: PBO:0057310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 517a","termid":"PBO:0057310"}


id: MONDO:0013340
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing young-onset Parkinson disease in which the cause of the disease is a mutation in the UCHL1 gene.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"young-onset Parkinson disease","termid":"MONDO:0017279"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 5, autosomal dominant, susceptibility to","secondary_identifiers":["OMIM:613643","MEDGEN:462249","UMLS:C3150899"],"synonyms":[{"name":"PARK5","type":"related"},{"name":"Parkinson disease 5, autosomal dominant, susceptibility to","type":"exact"},{"name":"Parkinson disease 5, susceptibility to","type":"exact"},{"name":"UCHL1 young-onset Parkinson disease","type":"exact"},{"name":"susceptibility to autosomal dominant Parkinson disease 5","type":"related"},{"name":"young-onset Parkinson disease caused by mutation in UCHL1","type":"exact"}],"termid":"MONDO:0013340","xrefs":{"Monarch":{"xref_id":"0013340"}}}


id: GO:0036355
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine + S-adenosyl-L-methionine + reduced acceptor = 2-iminoacetate + 4-methylphenol + 5'-deoxyadenosine + L-methionine + acceptor + 2 H+.","definition_xrefs":["PMID:17403671","EC:4.1.99.19","GOC:crds","MetaCyc:RXN-11319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-carbon lyase activity","termid":"GO:0016830"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016829","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-iminoacetate synthase activity","secondary_identifiers":["RHEA:26361"],"termid":"GO:0036355"}


id: MONDO:0009882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma clot retraction factor, deficiency of","secondary_identifiers":["OMIM:262800","MESH:C564885","UMLS:C1849778","MEDGEN:376656"],"synonyms":[{"name":"plasma clot retraction factor, deficiency of","type":"exact"}],"termid":"MONDO:0009882","xrefs":{"Monarch":{"xref_id":"0009882"}}}


id: PBO:0031660
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pseudohyphal_growth_abolished","termid":"PBO:0031660"}


id: PR:O74492
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 5-hydroxyisourate hydrolase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxyisourate hydrolase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.04","secondary_identifiers":["UniProtKB:O74492"],"synonyms":[{"name":"HIU hydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"HIUHase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-Urah","type":"exact"},{"name":"transthyretin-like protein C285.04 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74492"}


id: MONDO:0012674
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any age-related macular degeneration in which the cause of the disease is a mutation in the TLR4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"age-related macular degeneration","termid":"MONDO:0005150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"age related macular degeneration 10","secondary_identifiers":["UMLS:C1969108","MESH:C566935","MEDGEN:409758","OMIM:611488","DOID:0110022"],"synonyms":[{"name":"ARMD10","type":"exact"},{"name":"TLR4 age-related macular degeneration","type":"exact"},{"name":"age related macular degeneration type 10","type":"exact"},{"name":"age-related macular degeneration caused by mutation in TLR4","type":"exact"},{"name":"macular Degeneration, age-related, type 10","type":"exact"},{"name":"macular degeneration, age-related, 10","type":"related"}],"termid":"MONDO:0012674","xrefs":{"Monarch":{"xref_id":"0012674"}}}


id: PR:Q10183
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- faf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10183"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3F10.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.08c","synonyms":[{"name":"Spom972h-faf1","type":"exact"}],"termid":"PR:Q10183"}


id: PBO:0064835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 1 regulatory inhibitor subunit 11 pseudogene 1","termid":"PBO:0064835"}


id: PBO:0072558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras related GTP binding C","termid":"PBO:0072558"}


id: PBO:0039783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 10","termid":"PBO:0039783"}


id: MONDO:0850198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A medulloblastoma that is characterized as a molecular subtype that is not associated with activation of the WNT pathway or sonic hedgehog (SHH) pathway and TP53 mutations are absent.","definition_xrefs":["DOID:0080706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"medulloblastoma non-WNT/non-SHH","secondary_identifiers":["MEDGEN:1387799","NCIT:C129444","UMLS:C4330667"],"termid":"MONDO:0850198","xrefs":{"Monarch":{"xref_id":"0850198"}}}


id: GO:0120262
data:
  {"annotated_genes":["SJAG_05313","SJAG_01111","SJAG_03787","SJAG_04005","SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92763,97904,109478,112661,117068],"is_not":false,"summary":null,"term":"GO:0120262"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of heterochromatin organization.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heterochromatin organization","termid":"GO:0120261"},{"relation_name":"is_a","term_name":"negative regulation of chromatin organization","termid":"GO:1905268"},{"relation_name":"negatively_regulates","term_name":"heterochromatin organization","termid":"GO:0070828"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01111":null,"SJAG_02165":null,"SJAG_03787":null,"SJAG_04005":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006325"},{"rel_name":"regulates","termid":"GO:0006325"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006325","GO:0008150"],"is_obsolete":false,"name":"negative regulation of heterochromatin organization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of heterochromatin organization","type":"exact"},{"name":"down-regulation of heterochromatin organization","type":"exact"},{"name":"downregulation of heterochromatin organization","type":"exact"},{"name":"inhibition of heterochromatin organization","type":"narrow"}],"termid":"GO:0120262","terms_by_termid":{"GO:0120262":null}}


id: PBO:0089894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD-dependent epimerase/dehydratase","termid":"PBO:0089894"}


id: PATO:0000106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000106 acid sensitivity (obsolete PATO:0000106)","termid":"PATO:0000106"}


id: GO:1900792
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of shamixanthone.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"secondary metabolite catabolic process","termid":"GO:0090487"},{"relation_name":"is_a","term_name":"shamixanthone metabolic process","termid":"GO:1900791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"shamixanthone catabolic process","synonyms":[{"name":"shamixanthone breakdown","type":"exact"},{"name":"shamixanthone catabolism","type":"exact"},{"name":"shamixanthone degradation","type":"exact"}],"termid":"GO:1900792"}


id: GO:0042206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of halogenated hydrocarbons, compounds derived from hydrocarbons by replacing one or more hydrogen atoms with halogen atoms.","definition_xrefs":["GOC:ai","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"halogenated hydrocarbon metabolic process","termid":"GO:0042197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"halogenated hydrocarbon catabolic process","synonyms":[{"name":"halogenated hydrocarbon breakdown","type":"exact"},{"name":"halogenated hydrocarbon catabolism","type":"exact"},{"name":"halogenated hydrocarbon degradation","type":"exact"}],"termid":"GO:0042206"}


id: GO:0033911
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of 1,4-alpha-D-glucosidic linkages in alpha-D-glucans containing both 1,3- and 1,4-bonds.","definition_xrefs":["EC:3.2.1.61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"mycodextranase activity","secondary_identifiers":["MetaCyc:3.2.1.61-RXN"],"synonyms":[{"name":"1,3-1,4-alpha-D-glucan 4-glucanohydrolase activity","type":"related"}],"termid":"GO:0033911"}


id: MOD:01377
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to a (2S,3R,4S)-4-hydroxyisoleucine.","definition_xrefs":["ChEBI:141844","RESID:AA0448","PubMed:363352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monohydroxylated isoleucine","termid":"MOD:01415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(2S,3R,4S)-4-hydroxyisoleucine","synonyms":[{"name":"(2S,3R,4S)-2-amino-3-methyl-4-hydroxyvaleric acid","type":"exact"},{"name":"(2S,3R,4S)-2-amino-4-hydroxy-3-methylpentanoic acid","type":"exact"},{"name":"(2S,3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"(3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"MOD_RES (3R,4S)-4-hydroxyisoleucine","type":"exact"},{"name":"gamma-hydroxyisoleucine","type":"exact"}],"termid":"MOD:01377"}


id: PR:Q9UUJ8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1952.10c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUJ8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0658 Golgi apparatus membrane protein C1952.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.10c","synonyms":[{"name":"Spom972h-SPAC1952.10c","type":"exact"}],"termid":"PR:Q9UUJ8"}


id: PBO:0110165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(Ser) Um(44) 2'-O-methyltransferase Trm44","termid":"PBO:0110165"}


id: PBO:0091569
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by human TELO2","termid":"PBO:0091569"}


id: MONDO:0010103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teeth, fused","secondary_identifiers":["MEDGEN:4808","MESH:D005671","OMIM:273000","UMLS:C0016873","SCTID:1744008"],"synonyms":[{"name":"teeth, fused","type":"exact"}],"termid":"MONDO:0010103","xrefs":{"Monarch":{"xref_id":"0010103"}}}


id: PBO:0055163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2583","termid":"PBO:0055163"}


id: GO:0046353
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 2-deoxystreptamine antibiotic + acetyl-CoA = an N(3)-acetyl-2-deoxystreptamine antibiotic + CoA + H+.","definition_xrefs":["RHEA:12665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside N-acetyltransferase activity","termid":"GO:0034069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"aminoglycoside 3-N-acetyltransferase activity","secondary_identifiers":["GO:0016991","EC:2.3.1.81","MetaCyc:AMINOGLYCOSIDE-N3-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"3-N-aminoglycoside acetyltransferase activity","type":"related"},{"name":"3-aminoglycoside acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:2-deoxystreptamine-antibiotic N3-acetyltransferase activity","type":"related"},{"name":"acetyl-CoA:gentamicin-C N3-acetyltransferase activity","type":"narrow"},{"name":"aminoglycoside acetyltransferase AAC(3)-1","type":"related"},{"name":"aminoglycoside acetyltransferase AAC(3)-I activity","type":"related"},{"name":"gentamicin 3-N-acetyltransferase activity","type":"narrow"},{"name":"gentamicin acetyltransferase I activity","type":"narrow"},{"name":"gentamicin-(3)-N-acetyltransferase activity","type":"narrow"},{"name":"gentamycin 3-N-acetyltransferase activity","type":"exact"},{"name":"gentamycin acetyltransferase I","type":"related"}],"termid":"GO:0046353"}


id: PBO:0001509
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.9","termid":"PBO:0001509"}


id: GO:1990678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of an acetyl group from lysine at position 16 of the histone.","definition_xrefs":["PMID:17446861"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K16 deacetylation (obsolete GO:1990678)","termid":"GO:1990678"}


id: PBO:0000112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase Dak2","termid":"PBO:0000112"}


id: GO:0071128
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alpha5-beta1 integrin complex bound to osteopontin.","definition_xrefs":["PMID:16005200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alpha5-beta1 integrin-osteopontin complex","synonyms":[{"name":"ITGA5-ITGB1-SPP1 complex","type":"narrow"}],"termid":"GO:0071128"}


id: GO:0090586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + N-acetylglucosamine (out) = protein cysteine + N-acetylglucosamine-6-phosphate (in).","definition_xrefs":["PMID:8246840"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003824","GO:0016740","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"protein-phosphocysteine-N-acetylglucosamine phosphotransferase system transporter activity","termid":"GO:0090586"}


id: PBO:0073165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC63 homolog, protein translocation regulator pseudogene 2","termid":"PBO:0073165"}


id: PBO:0062596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 6 pseudogene","termid":"PBO:0062596"}


id: PBO:0090132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate IP3/IP4 kinase Arg82","termid":"PBO:0090132"}


id: GO:0099057
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of presynaptic endocytic zone membrane (obsolete GO:0099057)","termid":"GO:0099057"}


id: GO:0015469
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A toxin that exerts its effects by forming a channel in a membrane that allows the unregulated passage of substances into and out of the cell.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete channel-forming toxin activity (obsolete GO:0015469)","synonyms":[{"name":"channel-forming toxin activity","type":"exact"}],"termid":"GO:0015469"}


id: PBO:0072888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH3 domain binding kinase family member 3","termid":"PBO:0072888"}


id: GO:0005769
data:
  {"annotated_genes":["SJAG_01135","SJAG_03250","SJAG_01379","SJAG_01382","SJAG_01309","SJAG_00314","SJAG_01112","SJAG_01448","SJAG_04616","SJAG_02240"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[75043,75067,76620,81987,82034,101926,104674],"is_not":false,"summary":null,"term":"GO:0005769"},{"annotations":[101725,82248,97908],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031901"}]},"cv_name":"cellular_component","definition":"A membrane-bounded organelle that receives incoming material from primary endocytic vesicles that have been generated by clathrin-dependent and clathrin-independent endocytosis; vesicles fuse with the early endosome to deliver cargo for sorting into recycling or degradation pathways.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090701","GOC:mah","PMID:19696797"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome","termid":"GO:0005768"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00314":null,"SJAG_01112":null,"SJAG_01135":null,"SJAG_01309":null,"SJAG_01379":null,"SJAG_01382":null,"SJAG_01448":null,"SJAG_02240":null,"SJAG_03250":null,"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005768","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"early endosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005769","terms_by_termid":{"GO:0005769":null,"GO:0031901":null}}


id: PBO:0078438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon TCC) 4-1","termid":"PBO:0078438"}


id: GO:0018622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-chlorophenylacetate + NADH + O2 = 3,4-dihydroxyphenylacetate + chloride + NAD+.","definition_xrefs":["RHEA:14689","EC:1.14.12.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of two atoms of oxygen into one donor","termid":"GO:0016708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"4-chlorophenylacetate 3,4-dioxygenase activity","secondary_identifiers":["UM-BBD_reactionID:r0308","MetaCyc:1.14.12.9-RXN","KEGG_REACTION:R03306"],"synonyms":[{"name":"4-chlorophenylacetate,NADH:oxygen oxidoreductase (3,4-hydroxylating, dechlorinating)","type":"related"}],"termid":"GO:0018622"}


id: GO:0008286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of the insulin receptor binding to insulin.","definition_xrefs":["GOC:ceb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor protein tyrosine kinase signaling pathway","termid":"GO:0007169"},{"relation_name":"part_of","term_name":"cellular response to insulin stimulus","termid":"GO:0032869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"insulin receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-74752"],"synonyms":[{"name":"daf-2 receptor signaling pathway","type":"narrow"},{"name":"insulin receptor signalling pathway","type":"exact"}],"termid":"GO:0008286"}


id: PBO:0045613
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 24 (pseudogene)","termid":"PBO:0045613"}


id: PBO:0120865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog C, COPII component","termid":"PBO:0120865"}


id: MONDO:0014026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital stationary night blindness in which the cause of the disease is a mutation in the LRIT3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital stationary night blindness","termid":"MONDO:0016293"},{"relation_name":"is_a","term_name":"LRIT3-related retinopathy","termid":"MONDO:1040035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"congenital stationary night blindness 1F","secondary_identifiers":["MEDGEN:767313","OMIM:615058","DOID:0110864","UMLS:C3554399","GARD:15899"],"synonyms":[{"name":"CSNB1F","type":"exact"},{"name":"LRIT3 congenital stationary night blindness","type":"exact"},{"name":"congenital stationary night blindness 1F autosomal recessive","type":"exact"},{"name":"congenital stationary night blindness caused by mutation in LRIT3","type":"exact"},{"name":"congenital stationary night blindness type 1F","type":"exact"},{"name":"night blindness, congenital stationary (complete), 1F, autosomal recessive","type":"exact"},{"name":"night blindness, congenital stationary, type 1F","type":"related"}],"termid":"MONDO:0014026","xrefs":{"Monarch":{"xref_id":"0014026"}}}


id: PBO:0061649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 21","termid":"PBO:0061649"}


id: PBO:0085456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Potassium transporter that mediates K+ influx; activates high-affinity Ca2+ influx system (HACS) during mating pheromone response; expression up-regulated in response to alpha factor; regulated by Ste12p during mating; localized to sites of polarized growth; member of a fungal-specific gene family; PRM6 has a paralog, KCH1, that arose from the whole genome duplication","termid":"PBO:0085456"}


id: MONDO:0013822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acrodysostosis in which the cause of the disease is a mutation in the PDE4D gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acrodysostosis","termid":"MONDO:0019797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrodysostosis 2 with or without hormone resistance","secondary_identifiers":["UMLS:C3553250","OMIM:614613","GARD:15823","MEDGEN:766164"],"synonyms":[{"name":"ACRDYS2","type":"related"},{"name":"PDE4D acrodysostosis","type":"exact"},{"name":"acrodysostosis 2 with or without hormone resistance","type":"exact"},{"name":"acrodysostosis 2, with or without hormone resistance","type":"exact"},{"name":"acrodysostosis caused by mutation in PDE4D","type":"exact"}],"termid":"MONDO:0013822","xrefs":{"Monarch":{"xref_id":"0013822"}}}


id: PBO:0042591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 4","termid":"PBO:0042591"}


id: PBO:0001975
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ataxia-ocular apraxia 2","termid":"PBO:0001975"}


id: PATO:0001657
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A osmolarity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolarity","termid":"PATO:0001655"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased osmolarity","synonyms":[{"name":"high osmolarity","type":"exact"}],"termid":"PATO:0001657"}


id: GO:0050930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the directed movement of a motile cell or organism towards a higher concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis","termid":"GO:0050927"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of positive chemotaxis","termid":"GO:0050930"}


id: GO:2000134
data:
  {"annotated_genes":["SJAG_02026","SJAG_00071","SJAG_01401","SJAG_03681","SJAG_03591","SJAG_05346","SJAG_00996","SJAG_00991","SJAG_03048","SJAG_01210","SJAG_00169"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93754,94168,95336,100889],"is_not":false,"summary":null,"term":"GO:2000134"},{"annotations":[117963,104375,90950,103639,110930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[111715,93317],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031571"}]},"cv_name":"biological_process","definition":"Any signaling pathway that decreases or inhibits the activity of a cell cycle cyclin-dependent protein kinase to modulate the switch from G1 phase to S phase of the mitotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle G1/S phase transition","termid":"GO:1902807"},{"relation_name":"is_a","term_name":"regulation of G1/S transition of mitotic cell cycle","termid":"GO:2000045"},{"relation_name":"negatively_regulates","term_name":"G1/S transition of mitotic cell cycle","termid":"GO:0000082"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00169":null,"SJAG_00991":null,"SJAG_00996":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02026":null,"SJAG_03048":null,"SJAG_03591":null,"SJAG_03681":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0044772"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of G1/S transition of mitotic cell cycle","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000134","terms_by_termid":{"GO:0031568":null,"GO:0031571":null,"GO:2000134":null}}


id: PBO:0056252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAL2 antisense RNA 1","termid":"PBO:0056252"}


id: PBO:0076527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 40","termid":"PBO:0076527"}


id: GO:0055070
data:
  {"annotated_genes":["SJAG_04403","SJAG_00668","SJAG_01694","SJAG_00802","SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102181,76998,79987,109888,95145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"}]},"cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of copper ions within an organism or cell.","definition_xrefs":["GOC:mah","GOC:jid","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation homeostasis","termid":"GO:0055080"},{"relation_name":"is_a","term_name":"inorganic ion homeostasis","termid":"GO:0098771"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_00802":null,"SJAG_01694":null,"SJAG_02399":null,"SJAG_04403":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0098771"],"is_obsolete":false,"name":"copper ion homeostasis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"copper homeostasis","type":"broad"}],"termid":"GO:0055070","terms_by_termid":{"GO:0006878":null}}


id: MONDO:0006215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the gall bladder.","direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder carcinoma","termid":"MONDO:0003220"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder adenocarcinoma","secondary_identifiers":["EFO:1000262","DOID:3500","MEDGEN:76009","NCIT:C9166","UMLS:C0279651"],"synonyms":[{"name":"adenocarcinoma of gallbladder","type":"exact"},{"name":"adenocarcinoma of the gallbladder","type":"exact"},{"name":"gall bladder adenocarcinoma","type":"exact"},{"name":"gallbladder adenocarcinoma","type":"exact"}],"termid":"MONDO:0006215","xrefs":{"Monarch":{"xref_id":"0006215"}}}


id: GO:0060726
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the rate or frequency of coreceptor activity involved in epidermal growth factor receptor signaling pathway.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of coreceptor activity involved in epidermal growth factor receptor signaling pathway (obsolete GO:0060726)","synonyms":[{"name":"regulation of Neu/ErbB-2 receptor activity","type":"narrow"},{"name":"regulation of coreceptor activity involved in epidermal growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0060726"}


id: PATO:0001222
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001222 solid_angle_unit (obsolete PATO:0001222)","termid":"PATO:0001222"}


id: PBO:0117421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 16","termid":"PBO:0117421"}


id: PBO:0042371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD200 molecule","termid":"PBO:0042371"}


id: PBO:0040547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta 3-glucosyltransferase","termid":"PBO:0040547"}


id: MONDO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mature teratoma that arises from the ovary and occurs in children.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"childhood teratoma of the ovary","termid":"MONDO:0003819"},{"relation_name":"is_a","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood mature teratoma of the ovary","secondary_identifiers":["NCIT:C6548","DOID:6229","UMLS:C1332991","MEDGEN:232354"],"synonyms":[{"name":"childhood mature ovarian teratoma","type":"exact"},{"name":"childhood mature teratoma of ovary","type":"exact"},{"name":"childhood ovarian mature teratoma","type":"exact"},{"name":"mature ovarian teratoma of childhood","type":"exact"},{"name":"paediatric mature ovarian teratoma","type":"exact"},{"name":"paediatric mature teratoma of ovary","type":"exact"},{"name":"paediatric mature teratoma of the ovary","type":"exact"},{"name":"paediatric ovarian mature teratoma","type":"exact"},{"name":"pediatric mature ovarian teratoma","type":"exact"},{"name":"pediatric mature teratoma of ovary","type":"exact"},{"name":"pediatric mature teratoma of the ovary","type":"exact"},{"name":"pediatric ovarian mature teratoma","type":"exact"}],"termid":"MONDO:0003818","xrefs":{"Monarch":{"xref_id":"0003818"}}}


id: MONDO:0023147
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome caused by HPIV-3.","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"},{"relation_name":"is_a","term_name":"parainfluenza virus type 3 infectious disease","termid":"MONDO:0042974"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal parainfluenza virus type 3 syndrome","secondary_identifiers":["GARD:2309"],"synonyms":[{"name":"Human respirovirus 3 caused infectious embryofetopathy","type":"exact"},{"name":"Human respirovirus 3 infectious embryofetopathy","type":"exact"}],"termid":"MONDO:0023147","xrefs":{"Monarch":{"xref_id":"0023147"}}}


id: PBO:0033762
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cell_cycle_arrest_in_metaphase_of_meiosis_I","termid":"PBO:0033762"}


id: MONDO:0600030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-cell acute leukemia characterized by the presence of lymphoblasts that carry a translocation between the E2A gene on chromosome 19 and the PBX1 gene on chromosome 1. It occurs in children and less often in adults.","definition_xrefs":["NCIT:C80347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"B-cell acute lymphoblastic leukemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","secondary_identifiers":["MEDGEN:396324","SCTID:450956008","Orphanet:585956","UMLS:C2698315","DOID:0080649","GARD:22348"],"synonyms":[{"name":"B acute lymphoblastic leukaemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","type":"exact"},{"name":"B acute lymphoblastic leukemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","type":"exact"},{"name":"B lymphoblastic leukaemia lymphoma with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1) (morphologic abnormality)","type":"exact"},{"name":"B lymphoblastic leukemia lymphoma with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1) (morphologic abnormality)","type":"exact"},{"name":"B-acute lymphoblastic leukaemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","type":"exact"},{"name":"B-acute lymphoblastic leukemia with t(1;19)(q23;p13.3); E2A-PBX1 (TCF3-PBX1)","type":"exact"},{"name":"B-lymphoblastic leukemia/lymphoma with TCF3-PBX1","type":"exact"},{"name":"B-lymphoblastic leukemia/lymphoma with t(1;19)(q23;p13.3)","type":"exact"}],"termid":"MONDO:0600030","xrefs":{"Monarch":{"xref_id":"0600030"}}}


id: GO:0097514
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized envelope lying outside the cell membrane of a spore derived from a product of meiosis.","definition_xrefs":["GOC:mah","GOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005618"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"sexual spore wall","termid":"GO:0097514"}


id: PBO:0077879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripeptidyl peptidase 1","termid":"PBO:0077879"}


id: MONDO:0007379
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Meesmann corneal dystrophy (MECD) is a rare form of superficial corneal dystrophy characterized by distinct tiny bubble-like, round-to-oval punctate bilateral opacities in the central corneal epithelium, and to a lesser extent in the peripheral cornea, with little impact on vision.","definition_xrefs":["Orphanet:98954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial and subepithelial corneal dystrophy","termid":"MONDO:0000763"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"superficial corneal dystrophy","termid":"MONDO:0020212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Meesmann corneal dystrophy","secondary_identifiers":["MESH:D053559","NCIT:C84795","SCTID:1674008","GARD:9688","UMLS:C0339277","ICD9:371.51","MEDGEN:83283","OMIMPS:122100","DOID:0060451"],"synonyms":[{"name":"MECD","type":"exact"},{"name":"Meesman dystrophy","type":"related"},{"name":"Meesmann corneal dystrophy","type":"exact"},{"name":"Meesmann corneal epithelial dystrophy","type":"related"},{"name":"corneal dystrophy, Meesmann","type":"related"},{"name":"corneal dystrophy, Meesmann epithelial","type":"related"},{"name":"corneal dystrophy, juvenile epithelial of Meesmann","type":"related"},{"name":"corneal dystrophy, juvenile epithelial, of Meesmann","type":"related"},{"name":"juvenile epithelial of Meesmann corneal dystrophy","type":"exact"},{"name":"juvenile hereditary epithelial dystrophy","type":"exact"},{"name":"juvenile hereditary epithelial dystrophy of Meesmann","type":"exact"},{"name":"stocker-Holt dystrophy","type":"exact"}],"termid":"MONDO:0007379","xrefs":{"Monarch":{"xref_id":"0007379"}}}


id: PBO:0055936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 42","termid":"PBO:0055936"}


id: PBO:0116985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXK2 antisense RNA 1","termid":"PBO:0116985"}


id: MONDO:0021441
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the exocrine pancreas.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pancreatic exocrine neoplasm","termid":"MONDO:0021076"},{"relation_name":"is_a","term_name":"benign neoplasm of pancreas","termid":"MONDO:0021470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of exocrine pancreas","secondary_identifiers":["DOID:0080781","NCIT:C4613","SCTID:271956003","UMLS:C0347285","MEDGEN:138080"],"synonyms":[{"name":"benign exocrine pancreas neoplasm","type":"exact"},{"name":"benign exocrine pancreas tumor","type":"exact"},{"name":"benign exocrine pancreas tumour","type":"exact"},{"name":"benign exocrine pancreatic neoplasm","type":"exact"},{"name":"benign neoplasm of the exocrine pancreas","type":"exact"},{"name":"benign tumor of exocrine pancreas","type":"exact"},{"name":"benign tumor of the exocrine pancreas","type":"exact"},{"name":"benign tumour of exocrine pancreas","type":"exact"},{"name":"benign tumour of the exocrine pancreas","type":"exact"},{"name":"exocrine pancreas benign neoplasm","type":"exact"}],"termid":"MONDO:0021441","xrefs":{"Monarch":{"xref_id":"0021441"}}}


id: PBO:0066394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"receptor accessory protein 4","termid":"PBO:0066394"}


id: MONDO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cryptogenic organizing pneumonia (obsolete MONDO:0000267)","termid":"MONDO:0000267","xrefs":{"Monarch":{"xref_id":"0000267"}}}


id: PBO:0030766
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_mitomycin_C","termid":"PBO:0030766"}


id: PBO:0076402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor, RNA polymerase I subunit D","termid":"PBO:0076402"}


id: PBO:0084863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit; also predicted to be an S-adenosylmethionine-dependent RNA methyltransferase","termid":"PBO:0084863"}


id: PBO:0005517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silencing protein Rik1","termid":"PBO:0005517"}


id: PBO:0058870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 9902-2","termid":"PBO:0058870"}


id: PBO:0063059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter of CDKN1A antisense DNA damage activated RNA","termid":"PBO:0063059"}


id: FYPO:0005316
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:22771823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"},{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation during vegetative growth","termid":"FYPO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at subtelomere during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at subtelomere during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at subtelomeric region during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at subtelomere during vegetative growth","type":"exact"},{"name":"increased subtelomeric histone H4K12 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0005316"}


id: PBO:0063852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progesterone immunomodulatory binding factor 1","termid":"PBO:0063852"}


id: GO:0098823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The amidinylation of peptidyl-cysteine to form peptidyl-S-amidino-L-cysteine.","definition_xrefs":["RESID:AA0335"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine modification to S-amindino-L-cysteine (obsolete GO:0098823)","termid":"GO:0098823"}


id: PBO:0061793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"outer dynein arm docking complex subunit 4","termid":"PBO:0061793"}


id: PBO:0108598
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_changes_to_anatomical_or_cellular_structure","termid":"PBO:0108598"}


id: GO:1905555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of blood vessel branching.","definition_xrefs":["GOC:nc","GOC:BHF_telomere","GOC:TermGenie","PMID:23201774","GO_REF:0000058","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of angiogenesis","termid":"GO:0045766"},{"relation_name":"is_a","term_name":"positive regulation of morphogenesis of an epithelium","termid":"GO:1905332"},{"relation_name":"is_a","term_name":"regulation of blood vessel branching","termid":"GO:1905553"},{"relation_name":"positively_regulates","term_name":"branching involved in blood vessel morphogenesis","termid":"GO:0001569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of blood vessel branching","synonyms":[{"name":"activation of branching involved in blood vessel morphogenesis","type":"narrow"},{"name":"activation of patterning of blood vessels","type":"narrow"},{"name":"positive regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"up regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"up regulation of patterning of blood vessels","type":"exact"},{"name":"up-regulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"up-regulation of patterning of blood vessels","type":"exact"},{"name":"upregulation of branching involved in blood vessel morphogenesis","type":"exact"},{"name":"upregulation of patterning of blood vessels","type":"exact"}],"termid":"GO:1905555"}


id: GO:0016490
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of the peritrophic membrane, a tubular sheath of cuticle that shields the epithelial cells of the midgut from the gut contents. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of peritrophic membrane","synonyms":[{"name":"structural constituent of peritrophic matrix","type":"related"}],"termid":"GO:0016490"}


id: GO:0180042
data:
  {"annotated_genes":["SJAG_01319","SJAG_01080","SJAG_03442"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91113,108709,116573],"is_not":false,"summary":null,"term":"GO:0180042"}]},"cv_name":"biological_process","definition":"The directed movement of polyphosphate into the vacuole across the vacuolar membrane.","definition_xrefs":["PMID:37066886"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01080":null,"SJAG_01319":null,"SJAG_03442":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"polyphosphate import into vacuole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180042","terms_by_termid":{"GO:0180042":null}}


id: PBO:0029431
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_cell_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0029431"}


id: PBO:0086185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein serine/threonine kinase; essential for cell wall remodeling during growth; localized to sites of polarized growth and the mother-daughter bud neck; homolog of the alpha, beta, and gamma isoforms of mammalian protein kinase C (PKC)","termid":"PBO:0086185"}


id: PBO:0076670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPM8 channel associated factor 2C","termid":"PBO:0076670"}


id: GO:0071181
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of the intracellular domain of Notch3 (ICN3), the DNA-binding transcription factor RBP-Jkappa, and the transcriptional coactivator Mastermind-like-3 (MAML3); the complex is involved in transcriptional activation in response to Notch-mediated signaling.","definition_xrefs":["PMID:12370315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"MAML3-RBP-Jkappa-ICN3 complex","synonyms":[{"name":"MAML3-RBP-Jkappa-Notch3 complex","type":"exact"}],"termid":"GO:0071181"}


id: MONDO:0030899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism","termid":"MONDO:0018910"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"oculocutaneous albinism type 8","secondary_identifiers":["MEDGEN:1754121","GARD:18017","OMIM:619165","UMLS:C5436929","Orphanet:597733"],"synonyms":[{"name":"OCA8","type":"exact"},{"name":"oculocutaneous albinism, type 8","type":"exact"},{"name":"oculocutaneous albinism, type VIII","type":"exact"}],"termid":"MONDO:0030899","xrefs":{"Monarch":{"xref_id":"0030899"}}}


id: GO:0099129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A rapid, force generating length change of an outer hair cell in response to electrical stimulation. This occurs naturally as during hearing where it serves a source of mechanical amplification.","definition_xrefs":["PMID:12239568","PMID:2187727","PMID:16887876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin-mediated cell contraction","termid":"GO:0070252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cochlear outer hair cell electromotile response","termid":"GO:0099129"}


id: PBO:0057503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 621","termid":"PBO:0057503"}


id: GO:0072069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and/or functional features that characterize the distal convoluted tubule cells of the kidney as it progresses from its formation to the mature state.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in kidney development","termid":"GO:0061005"},{"relation_name":"part_of","term_name":"distal convoluted tubule development","termid":"GO:0072025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"DCT cell differentiation","synonyms":[{"name":"distal convoluted tubule cell differentiation","type":"exact"}],"termid":"GO:0072069"}


id: PATO:0002205
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's ability to hold an electrical charge.","definition_xrefs":["Wikipedia:Wikipedia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capacitance","termid":"PATO:0002205"}


id: MONDO:1010051
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Diabetes insipidus that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diabetes insipidus, non-human animal","secondary_identifiers":["OMIA:000278"],"termid":"MONDO:1010051","xrefs":{"Monarch":{"xref_id":"1010051"}}}


id: GO:0061648
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the replacement of an existing tooth with another tooth.","definition_xrefs":["PMID:15170864","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"odontogenesis","termid":"GO:0042476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tooth replacement","termid":"GO:0061648"}


id: GO:0019377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"membrane lipid catabolic process","termid":"GO:0046466"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycolipid catabolic process","synonyms":[{"name":"glycolipid breakdown","type":"exact"},{"name":"glycolipid catabolism","type":"exact"},{"name":"glycolipid degradation","type":"exact"}],"termid":"GO:0019377"}


id: GO:2000486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of glutamine transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of glutamine transport","termid":"GO:2000485"},{"relation_name":"negatively_regulates","term_name":"glutamine transport","termid":"GO:0006868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glutamine transport","synonyms":[{"name":"negative regulation of L-glutamine transport","type":"related"}],"termid":"GO:2000486"}


id: GO:0051929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the directed movement of calcium ions via the activity of voltage-gated calcium channels.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of calcium ion transport via voltage-gated calcium channel activity (obsolete GO:0051929)","synonyms":[{"name":"activation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"positive regulation of calcium ion transport via voltage-gated calcium channel activity","type":"exact"},{"name":"positive regulation of calcium transport via voltage gated calcium channel","type":"exact"},{"name":"stimulation of calcium ion transport via voltage gated calcium channel","type":"narrow"},{"name":"up regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"up-regulation of calcium ion transport via voltage gated calcium channel","type":"exact"},{"name":"upregulation of calcium ion transport via voltage gated calcium channel","type":"exact"}],"termid":"GO:0051929"}


id: MONDO:0032665
data:
  {"annotated_genes":["SJAG_00886"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88026],"is_not":false,"summary":null,"term":"MONDO:0032665"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00886":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 68","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081229","MEDGEN:1648490","OMIM:618302","UMLS:C4749033"],"synonyms":[{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER, AUTOSOMAL RECESSIVE 68","type":"related"},{"name":"MRT68","type":"related"},{"name":"Mental Retardation, Autosomal Recessive 68","type":"related"}],"termid":"MONDO:0032665","terms_by_termid":{"MONDO:0032665":null},"xrefs":{"Monarch":{"xref_id":"0032665"}}}


id: GO:0018666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4-dichlorophenol + NADPH + H+ + O2 = 3,5-dichlorocatechol + NADP+ + H2O.","definition_xrefs":["EC:1.14.13.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"2,4-dichlorophenol 6-monooxygenase activity","secondary_identifiers":["RHEA:20920","MetaCyc:24-DICHLOROPHENOL-6-MONOOXYGENASE-RXN","UM-BBD_enzymeID:r0275"],"synonyms":[{"name":"2,4-dichlorophenol hydroxylase activity","type":"exact"},{"name":"2,4-dichlorophenol monooxygenase activity","type":"related"},{"name":"2,4-dichlorophenol,NADPH:oxygen oxidoreductase (6-hydroxylating)","type":"related"}],"termid":"GO:0018666"}


id: PBO:0066835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 134","termid":"PBO:0066835"}


id: GO:0102831
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 raffinose = stachyose + sucrose.","definition_xrefs":["GOC:pz","PMID:12060258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0016757","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"stachyose synthase activity","secondary_identifiers":["MetaCyc:RXN-8287"],"termid":"GO:0102831"}


id: PBO:0005374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit VIIa (predicted)","termid":"PBO:0005374"}


id: PBO:0069811
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1097, pseudogene","termid":"PBO:0069811"}


id: MONDO:1010609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Exocrine pancreatic insufficiency that occurs in tiger.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic insufficiency, non-human animal","termid":"MONDO:1010058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exocrine pancreatic insufficiency, tiger","secondary_identifiers":["OMIA:000765-9694"],"termid":"MONDO:1010609","xrefs":{"Monarch":{"xref_id":"1010609"}}}


id: PBO:0053290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lck interacting transmembrane adaptor 1","termid":"PBO:0053290"}


id: GO:0032249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of adenosine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleoside transport","termid":"GO:0032245"},{"relation_name":"regulates","term_name":"adenosine transport","termid":"GO:0032238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of adenosine transport","termid":"GO:0032249"}


id: PBO:0090072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinate phosphoribosyltransferase Npt1","termid":"PBO:0090072"}


id: PBO:0015703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane transmembrane transport regulator (predicted)","termid":"PBO:0015703"}


id: MONDO:0000786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving a Prunus domestica.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete plum allergy (obsolete MONDO:0000786)","secondary_identifiers":["DOID:0060511"],"synonyms":[{"name":"Prunus domestica allergic disease","type":"exact"},{"name":"Prunus domestica caused allergic disease","type":"exact"},{"name":"Prunus domestica fruit allergy","type":"exact"},{"name":"allergy of Prunus domestica","type":"exact"}],"termid":"MONDO:0000786","xrefs":{"Monarch":{"xref_id":"0000786"}}}


id: PBO:0055835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat and fibronectin type III domain containing 5","termid":"PBO:0055835"}


id: MONDO:0009287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Glycogenosis due to glucose-6-phosphatase deficiency (G6P) type a, or glycogen storage disease (GSD) type 1a, is a type of glycogenosis due to G6P deficiency.","definition_xrefs":["Orphanet:79258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease I","termid":"MONDO:0002413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease due to glucose-6-phosphatase deficiency type IA","secondary_identifiers":["OMIM:232200","GARD:7864","MESH:C538655","DOID:2749","UMLS:C2919796","NANDO:2201153","MEDGEN:415885","SCTID:444707001"],"synonyms":[{"name":"G6P deficiency type 1a","type":"exact"},{"name":"G6PC glycogen storage disease","type":"exact"},{"name":"GSD Ia","type":"related"},{"name":"GSD due to G6P deficiency type 1a","type":"exact"},{"name":"GSD due to G6P deficiency type Ia","type":"exact"},{"name":"GSD type 1a","type":"exact"},{"name":"GSD1","type":"related"},{"name":"GSD1A","type":"related"},{"name":"GSDIa","type":"exact"},{"name":"Von Gierke disease","type":"related"},{"name":"glucose-6-phosphatase deficiency","type":"related"},{"name":"glucose-6-phosphatase deficiency glycogen storage disease","type":"related"},{"name":"glycogen storage disease 1","type":"related"},{"name":"glycogen storage disease 1A","type":"related"},{"name":"glycogen storage disease Ia","type":"related"},{"name":"glycogen storage disease caused by mutation in G6PC","type":"exact"},{"name":"glycogen storage disease due to G6P deficiency type Ia","type":"exact"},{"name":"glycogen storage disease type 1a","type":"exact"},{"name":"glycogen storage disease type Ia","type":"exact"},{"name":"glycogenosis due to glucose-6-phosphatase deficiency type 1a","type":"exact"},{"name":"glycogenosis due to glucose-6-phosphatase deficiency type Ia","type":"exact"},{"name":"glycogenosis type Ia","type":"exact"},{"name":"hepatorenal form of glycogen storage disease","type":"related"},{"name":"hepatorenal glycogenosis","type":"related"}],"termid":"MONDO:0009287","xrefs":{"Monarch":{"xref_id":"0009287"}}}


id: MONDO:0000467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intermittent failure of atrial electrical impulse conduction to the ventricles.","definition_xrefs":["NCIT:C111119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrioventricular block","termid":"MONDO:0000465"},{"relation_name":"is_a","term_name":"cardiac rhythm disease","termid":"MONDO:0007263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"second-degree atrioventricular block","secondary_identifiers":["MEDGEN:75546","DOID:0050822","ICD9:426.13","SCTID:195042002","UMLS:C0264906","ICD10CM:I44.1"],"synonyms":[{"name":"AV block second degree","type":"exact"},{"name":"atrioventricular block second degree","type":"exact"},{"name":"atrioventricular block, second degree","type":"exact"},{"name":"second degree AV block","type":"exact"},{"name":"second degree atrioventricular block","type":"exact"},{"name":"second-degree heart block","type":"exact"}],"termid":"MONDO:0000467","xrefs":{"Monarch":{"xref_id":"0000467"}}}


id: PATO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process that has a value that is increased compared to normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"process quality","termid":"PATO:0001236"},{"relation_name":"is_a","term_name":"increased quality","termid":"PATO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased process quality","termid":"PATO:0002304"}


id: GO:0042864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the siderochrome pyochelin (2-(2-o-hydroxyphenyl-2-thiazolin-4-yl)-3-methylthiazolidine-4-carboxylic acid).","definition_xrefs":["PMID:6794030","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"siderophore biosynthetic process","termid":"GO:0019290"},{"relation_name":"is_a","term_name":"sulfur compound biosynthetic process","termid":"GO:0044272"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0006790","GO:0044281"],"is_obsolete":false,"name":"pyochelin biosynthetic process","secondary_identifiers":["GO:0031187","GO:0031188"],"synonyms":[{"name":"pyochelin anabolism","type":"exact"},{"name":"pyochelin biosynthesis","type":"exact"},{"name":"pyochelin biosynthetic process, peptide formation","type":"narrow"},{"name":"pyochelin biosynthetic process, peptide modification","type":"narrow"},{"name":"pyochelin formation","type":"exact"},{"name":"pyochelin synthesis","type":"exact"}],"termid":"GO:0042864"}


id: MONDO:0009691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classical mycosis fungoides is the most common type of mycosis fungoides (MF), a form of cutaneous T-cell lymphoma, and is characterized by slow progression from patches to more infiltrated plaques and eventually to tumors.","definition_xrefs":["Orphanet:2584"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell non-Hodgkin lymphoma","termid":"MONDO:0000607"},{"relation_name":"is_a","term_name":"mycosis fungoides and variants","termid":"MONDO:0015821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"mycosis fungoides","secondary_identifiers":["GARD:3863","MEDGEN:7771","MedDRA:10028483","NORD:1479","UMLS:C0026948","ONCOTREE:MYCF","NCIT:C3246","ICD9:202.1","EFO:1001051","ICDO:9700/3","SCTID:118618005","ICD10CM:C84.0","MESH:D009182","DOID:8691","icd11.foundation:901411509","OMIM:254400"],"synonyms":[{"name":"Alibert-Bazin syndrome","type":"related"},{"name":"CTCL/ mycosis fungoides","type":"exact"},{"name":"MF","type":"exact"},{"name":"classic mycosis fungoides","type":"related"},{"name":"cutaneous T-cell lymphoma/mycosis fungoides","type":"exact"},{"name":"granuloma fungoides","type":"related"},{"name":"mycosis fungoides","type":"exact"},{"name":"mycosis fungoides (morphologic abnormality)","type":"exact"},{"name":"mycosis fungoides NOS (morphologic abnormality)","type":"exact"},{"name":"mycosis fungoides lymphoma","type":"exact"},{"name":"mycosis fungoides of unspecified site","type":"exact"},{"name":"mycosis fungoides, Alibert-Bazin type","type":"exact"},{"name":"mycosis fungoides, unspecified site, extranodal and solid organ sites","type":"exact"}],"termid":"MONDO:0009691","xrefs":{"Monarch":{"xref_id":"0009691"}}}


id: PBO:0053189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leptin receptor overlapping transcript","termid":"PBO:0053189"}


id: MONDO:0005354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chronic form of hepatitis C infection.","definition_xrefs":["MONDO:patterns/chronic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatitis C virus infection","termid":"MONDO:0005231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"chronic hepatitis C virus infection","secondary_identifiers":["MESH:D019698","EFO:0004220","ICD9:070.44"],"synonyms":[{"name":"chronic Hepatitis C","type":"exact"},{"name":"hepatitis C infection, chronic","type":"exact"},{"name":"hepatitis C, chronic","type":"exact"}],"termid":"MONDO:0005354","xrefs":{"Monarch":{"xref_id":"0005354"}}}


id: MONDO:0000482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A focal dystonia that affects a single muscle or small group of muscles in the hand resulting from involuntary muscular contractions.","definition_xrefs":["DOID:0050841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"focal dystonia","termid":"MONDO:0000477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"focal hand dystonia","secondary_identifiers":["SCTID:52008007","ICD9:333.84","MEDGEN:57821","UMLS:C0154676"],"synonyms":[{"name":"hand and arm dystonia","type":"exact"},{"name":"organic writer's cramp","type":"related"},{"name":"writer's cramp","type":"exact"}],"termid":"MONDO:0000482","xrefs":{"Monarch":{"xref_id":"0000482"}}}


id: PBO:0088289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi GRIP domain protein Grp1","termid":"PBO:0088289"}


id: MONDO:0000151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"symphalangism","secondary_identifiers":["SCTID:253975004","MEDGEN:1846284","UMLS:C5848178"],"termid":"MONDO:0000151","xrefs":{"Monarch":{"xref_id":"0000151"}}}


id: FYPO:0008043
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in which the localization of a protein to the nucleus is increased during stationary phase.","definition_xrefs":["PMID:36174923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to nucleus","termid":"FYPO:0004456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"increased protein localization to nucleus during stationary phase","termid":"FYPO:0008043"}


id: PBO:0027778
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_mitotic_spindle_elongation","termid":"PBO:0027778"}


id: GO:0032671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-27 production","secondary_identifiers":["GO:0045531"],"synonyms":[{"name":"regulation of IL-27 production","type":"exact"},{"name":"regulation of interleukin-27 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-27 formation","type":"narrow"},{"name":"regulation of interleukin-27 synthesis","type":"narrow"}],"termid":"GO:0032671"}


id: GO:0080158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a chloroplast ribulose bisphosphate carboxylase (RubisCO) complex. Includes the synthesis of the constituent protein molecules, and those protein modifications that are involved in synthesis or assembly of the complex.","definition_xrefs":["PMID:20561259"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast ribulose bisphosphate carboxylase complex biogenesis (obsolete GO:0080158)","termid":"GO:0080158"}


id: PBO:0063643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1","termid":"PBO:0063643"}


id: PBO:0028731
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_hercynylselenocysteine_level_during_vegetative_growth","termid":"PBO:0028731"}


id: PATO:0002490
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed anteriorly.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior orientation","synonyms":[{"name":"anteriorly directly","type":"exact"}],"termid":"PATO:0002490"}


id: MONDO:0020538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant dysgerminomatous germ cell tumor of ovary is the most common form of malignant germ cell tumor of ovary, arising from germ cells in the ovary, usually presenting during adolescence with pelvic mass, fever, vaginal bleeding, and acute abdomen and is characterized by bilaterality (around 10% of cases), association with dysgenetic gonads (5 to 10% of cases), elevated serum lactate dehydrogenase (LDH) and human chorionic gonadotrophin (hCG) (in the presence of syncitiotrophoblasts). Malignant dysgerminomatous germ cell tumor of ovary responds well to chemotherapy, potentially sparing patients from infertility and early mortality.","definition_xrefs":["Orphanet:99912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor of ovary","termid":"MONDO:0018171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant dysgerminomatous germ cell tumor of ovary","secondary_identifiers":["GARD:19705"],"synonyms":[{"name":"dysgerminomatous germ cell cancer of ovary","type":"exact"},{"name":"dysgerminomatous germ cell cancer of the ovary","type":"exact"},{"name":"malignant dysgerminomatous germ cell tumor of the ovary","type":"related"},{"name":"malignant dysgerminomatous germ cell tumour of the ovary","type":"related"},{"name":"malignant ovarian dysgerminoma","type":"exact"}],"termid":"MONDO:0020538","xrefs":{"Monarch":{"xref_id":"0020538"}}}


id: GO:0009982
data:
  {"annotated_genes":["SJAG_01172","SJAG_00319","SJAG_03572","SJAG_04754","SJAG_02978","SJAG_04065","SJAG_00088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160153"},{"annotations":[97372,108259,116359],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106032"},{"annotations":[116360,96674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106029"},{"annotations":[108260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160150"},{"annotations":[93220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160151"},{"annotations":[104509],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160148"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a uridine in RNA = a pseudouridine in RNA. Conversion of uridine in an RNA molecule to pseudouridine by rotation of the C1'-N-1 glycosidic bond of uridine in RNA to a C1'-C5.","definition_xrefs":["GOC:mah","RHEA:48348"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00088":null,"SJAG_00319":null,"SJAG_01172":null,"SJAG_02978":null,"SJAG_03572":null,"SJAG_04065":null,"SJAG_04754":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"pseudouridine synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6790905","GO:0016439","Reactome:R-HSA-8870289","Reactome:R-HSA-6782381","Reactome:R-HSA-6787566","Reactome:R-HSA-6786583"],"termid":"GO:0009982","terms_by_termid":{"GO:0106029":null,"GO:0106032":null,"GO:0160148":null,"GO:0160150":null,"GO:0160151":null,"GO:0160153":null}}


id: _global:qualifier
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A relation that holds between an attribute or a qualifier and another attribute.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"qualifier","secondary_identifiers":["RO:0002573"],"termid":"_global:qualifier"}


id: MONDO:0006589
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Contact dermatitis associated with allergens or irritants found in the workplace.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contact dermatitis","termid":"MONDO:0005480"},{"relation_name":"is_a","term_name":"occupational disorder","termid":"MONDO:0100366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"occupational dermatitis","secondary_identifiers":["DOID:4404","ICD9:692.9","MEDGEN:14449","NCIT:C34859","SCTID:402587003","UMLS:C0028796","EFO:1000744","MESH:D009783"],"synonyms":[{"name":"occupational allergic contact dermatitis","type":"exact"},{"name":"occupational dermatitis","type":"exact"},{"name":"occupational eczema","type":"exact"},{"name":"occupational eczema (disorder) [ambiguous]","type":"exact"}],"termid":"MONDO:0006589","xrefs":{"Monarch":{"xref_id":"0006589"}}}


id: MOD:01984
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-alanine residue by a thioether bond to form 2-(S-L-cysteinyl)-L-alanine.","definition_xrefs":["RESID:AA0621","PubMed:21526839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-alanine residue","termid":"MOD:02040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-L-alanine","synonyms":[{"name":"(2R)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"(2R,5R)-2,5-diamino-5-methyl-4-thiahexanedioic acid","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-L-alanine","type":"exact"}],"termid":"MOD:01984"}


id: GO:0004522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA to 3'-phosphomononucleotides and 3'-phosphooligonucleotides ending in C-P or U-P with 2',3'-cyclic phosphate intermediates.","definition_xrefs":["EC:4.6.1.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity","termid":"GO:0004521"},{"relation_name":"is_a","term_name":"phosphorus-oxygen lyase activity","termid":"GO:0016849"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829","GO:0140098"],"is_obsolete":false,"name":"ribonuclease A activity","secondary_identifiers":["Wikipedia:Ribonuclease_A"],"synonyms":[{"name":"RNase A activity","type":"related"},{"name":"RNase I activity","type":"related"},{"name":"RNase activity","type":"broad"},{"name":"S-genotype-assocd. glycoproteins","type":"related"},{"name":"SLSG glycoproteins","type":"related"},{"name":"alkaline ribonuclease activity","type":"exact"},{"name":"ceratitis capitata alkaline ribonuclease activity","type":"exact"},{"name":"endoribonuclease I","type":"related"},{"name":"gene S glycoproteins","type":"related"},{"name":"gene S locus-specific glycoproteins","type":"related"},{"name":"pancreatic RNase activity","type":"related"},{"name":"pancreatic ribonuclease activity","type":"narrow"},{"name":"ribonuclease I activity","type":"related"},{"name":"ribonucleate 3'-pyrimidino-oligonucleotidohydrolase activity","type":"exact"},{"name":"ribonucleic phosphatase activity","type":"exact"}],"termid":"GO:0004522"}


id: GO:0003233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bulbus arteriosus is generated and organized. The bulbus arteriosus is an elastic cardiac chamber.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber morphogenesis","termid":"GO:0003206"},{"relation_name":"part_of","term_name":"bulbus arteriosus development","termid":"GO:0003232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bulbus arteriosus morphogenesis","termid":"GO:0003233"}


id: GO:0170064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which lysosomes undergo budding and fission to maintain their steady-state number, shape, size, composition and function, and to accomplish regeneration.","definition_xrefs":["PMID:38538795","PMID:31171420"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fission","termid":"GO:0048285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosome fission","termid":"GO:0170064"}


id: PBO:0005521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle subunit Srp54","termid":"PBO:0005521"}


id: PBO:0025516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein phosphatase PP1, Dis2","termid":"PBO:0025516"}


id: PBO:0011149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ASCC1 ortholog, implicated in transcriptional regulation (predicted)","termid":"PBO:0011149"}


id: MONDO:0001652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma (disease) that involves the scrotum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotum neoplasm","termid":"MONDO:0003319"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scrotum melanoma","secondary_identifiers":["DOID:13160","MEDGEN:233100","NCIT:C7361","UMLS:C1331544"],"synonyms":[{"name":"melanoma (disease) of scrotum","type":"exact"},{"name":"melanoma of scrotum","type":"exact"},{"name":"melanoma of the scrotum","type":"exact"},{"name":"scrotal melanoma","type":"exact"},{"name":"scrotum melanoma (disease)","type":"exact"}],"termid":"MONDO:0001652","xrefs":{"Monarch":{"xref_id":"0001652"}}}


id: MONDO:0017774
data:
  {"annotated_genes":["SJAG_00906"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89261],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009528"}]},"cv_name":"mondo","definition":"A group of lipoprotein metabolism disorders that are characterized by permanently low levels (below the 5th percentile) of apolipoprotein B and LDL cholesterol.","definition_xrefs":["Orphanet:31154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypolipoproteinemia","termid":"MONDO:0001822"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00906":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"hypobetalipoproteinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:190786004","icd11.foundation:1934975006","UMLS:C0020597","MESH:D006995","MEDGEN:6978","GARD:18802","DOID:1390"],"synonyms":[{"name":"hypo-beta-lipoproteinemia","type":"exact"}],"termid":"MONDO:0017774","terms_by_termid":{"MONDO:0009528":null},"xrefs":{"Monarch":{"xref_id":"0017774"}}}


id: PBO:0071161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a","termid":"PBO:0071161"}


id: PBO:0027153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_histidine_level","termid":"PBO:0027153"}


id: MONDO:0003851
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare type of teratoma that arises from the ovary and resembles a malformed fetus.","definition_xrefs":["NCIT:C39996"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mature ovarian teratoma","termid":"MONDO:0003820"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian fetiform teratoma","secondary_identifiers":["MEDGEN:276666","DOID:6314","UMLS:C1518715"],"synonyms":[{"name":"homunculus","type":"exact"},{"name":"ovarian fetiform teratoma","type":"exact"}],"termid":"MONDO:0003851","xrefs":{"Monarch":{"xref_id":"0003851"}}}


id: GO:0075705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell that begins by invagination of a specific region of the host cell plasma membrane around the bound virus to form a clathrin-coated pit, which then pinches off to form a clathrin-coated endocytic vesicles containing the virus. The vesicle then delivers its viral content to early endosomes, and the process ends when the viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane (obsolete GO:0075705)","synonyms":[{"name":"viral entry into host cell via clathrin-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"},{"name":"viral penetration via endocytosis followed by genetic injection through the endosome membrane","type":"exact"}],"termid":"GO:0075705"}


id: FYPO:0009052
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype in which cell growth is increased relative to normal in a medium containing glutamate as the nitrogen source.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0002058","FYPO:0002057","FYPO:0001985"],"is_obsolete":false,"name":"increased cell population growth on glutamate nitrogen source","synonyms":[{"name":"increased growth on glutamate nitrogen source","type":"broad"},{"name":"increased vegetative cell growth on glutamate nitrogen source","type":"exact"}],"termid":"FYPO:0009052"}


id: PBO:0066929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 231","termid":"PBO:0066929"}


id: GO:0009568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Plant storage body for amylose and amylopectin, 1-100um in diameter, and located in amyloplasts. Also contains small amounts of enzymes, amino acids, lipids and nucleic acids. The shape of the grain varies widely amongst species, but is often spherical or disk-shaped.","definition_xrefs":["GOC:jl","PMID:11217978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"starch grain","termid":"GO:0043036"},{"relation_name":"part_of","term_name":"amyloplast","termid":"GO:0009501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"amyloplast starch grain","synonyms":[{"name":"amyloplast starch granule","type":"exact"}],"termid":"GO:0009568"}


id: PBO:0054414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1810","termid":"PBO:0054414"}


id: PBO:0069370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 630, pseudogene","termid":"PBO:0069370"}


id: GO:0009017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-succinyl-L-glutamate + H2O = L-glutamate + succinate.","definition_xrefs":["EC:3.5.1.96","RHEA:15169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"succinylglutamate desuccinylase activity","secondary_identifiers":["KEGG_REACTION:R00411","MetaCyc:SUCCGLUDESUCC-RXN"],"synonyms":[{"name":"AstE","type":"related"},{"name":"N-succinyl-L-glutamate amidohydrolase activity","type":"related"},{"name":"N2-succinylglutamate desuccinylase activity","type":"exact"},{"name":"SGDS","type":"related"}],"termid":"GO:0009017"}


id: FYPO:0008034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the serine residue at position 7 within one or more copies of the heptapeptide repeat (YSPTSPS) of the C-terminal domain of RNA polymerase II normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:32282918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal phosphorylation of RNA polymerase II C-terminal domain serine 7 residues during vegetative growth","termid":"FYPO:0008034"}


id: MONDO:0971109
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated congenital femoral bifurcation","secondary_identifiers":["Orphanet:667589"],"termid":"MONDO:0971109","xrefs":{"Monarch":{"xref_id":"0971109"}}}


id: FYPO:0000764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cycloheximide than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cycloheximide","synonyms":[{"name":"resistance to cycloheximide during mitotic cell cycle","type":"related"},{"name":"resistance to cycloheximide during vegetative growth","type":"exact"},{"name":"resistant to cycloheximide","type":"exact"}],"termid":"FYPO:0000764"}


id: PBO:0054067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1414","termid":"PBO:0054067"}


id: FYECO:0000454
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tetracycline was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tetracycline","termid":"FYECO:0000454"}


id: PBO:0048868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A4","termid":"PBO:0048868"}


id: PR:O59743
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.07c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59743"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C530.07c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.07c","synonyms":[{"name":"Spom972h-SPBC530.07c","type":"exact"}],"termid":"PR:O59743"}


id: PBO:0064902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase 3 catalytic subunit beta","termid":"PBO:0064902"}


id: PBO:0027999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spherical_vegetative_cell","termid":"PBO:0027999"}


id: PBO:0085716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in SRP-independent targeting of substrates to the ER; component of an alternative ER targeting pathway that has partial functional redundancy with the GET pathway; preference for substrates with downstream transmembrane domains; interacts with Env10p/Snd2p and Pho88p/Snd3p; can compensate for loss of SRP; co-purifies with ribosomes; GFP-fusion protein localizes to the cytoplasm","termid":"PBO:0085716"}


id: GO:0018904
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving organic ethers, any anhydride of the general formula R1-O-R2, formed between two identical or nonidentical organic hydroxy compounds.","definition_xrefs":["ISBN:0198506732","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete ether metabolic process (obsolete GO:0018904)","synonyms":[{"name":"ether metabolism","type":"exact"},{"name":"organic ether metabolic process","type":"exact"},{"name":"organic ether metabolism","type":"exact"}],"termid":"GO:0018904"}


id: MONDO:0023628
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Levator syndrome is characterized by sporadic pain in the rectum caused by spasm of a muscle near the anus (the levator ani muscle). The muscle spasm causes pain that typically is not related to defecation. The pain usually lasts less than 20 minutes. Pain may be brief and intense or a vague ache high in the rectum. It may occur spontaneously or with sitting and can waken a person from sleep. The pain may feel as if it would be relieved by the passage of gas or a bowel movement. In severe cases, the pain can persist for many hours and can recur frequently. A person may have undergone various unsuccessful rectal operations to relieve these symptoms.","definition_xrefs":["GARD:0006899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"anus disorder","termid":"MONDO:0002519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"levator syndrome","secondary_identifiers":["MESH:C535890","SCTID:62647006","MEDGEN:98071","NCIT:C113615","UMLS:C0423738"],"synonyms":[{"name":"anorectal spasm","type":"related"},{"name":"levator ani spasm syndrome","type":"related"},{"name":"levator ani syndrome","type":"related"},{"name":"levator syndrome","type":"exact"},{"name":"painful spasm of anus","type":"exact"},{"name":"paroxysmal proctalgia","type":"related"},{"name":"proctalgia fugax","type":"related"},{"name":"psychogenic anal spasm","type":"related"}],"termid":"MONDO:0023628","xrefs":{"Monarch":{"xref_id":"0023628"}}}


id: PBO:0054062
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1409","termid":"PBO:0054062"}


id: PBO:0000542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP binding enzyme (predicted)","termid":"PBO:0000542"}


id: FYPO:0006098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to all or part of the cytoplasm is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during vegetative growth","termid":"FYPO:0000443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to cytoplasm","synonyms":[{"name":"abnormal protein localisation to cytoplasm","type":"exact"},{"name":"abnormal protein localization to cytoplasm during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to cytoplasm during vegetative growth","type":"exact"}],"termid":"FYPO:0006098"}


id: MONDO:0002563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A somatostatin-producing neuroendocrine tumor that arises from the jejunum. It is characterized by the presence of tubulo-glandular structures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"jejunal cancer","termid":"MONDO:0006815"},{"relation_name":"is_a","term_name":"jejunal neuroendocrine tumor, well differentiated, low or intermediate grade","termid":"MONDO:0015064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"jejunal somatostatinoma","secondary_identifiers":["DOID:3216","NCIT:C5787","UMLS:C1334297","MEDGEN:233585"],"synonyms":[{"name":"Delta cell tumor of jejunum","type":"exact"},{"name":"Delta cell tumor of the jejunum","type":"exact"},{"name":"Delta cell tumour of jejunum","type":"exact"},{"name":"Delta cell tumour of the jejunum","type":"exact"},{"name":"Somatosatinoma of jejunum","type":"exact"},{"name":"Somatosatinoma of the jejunum","type":"exact"},{"name":"jejunal delta cell somatostatin producing tumor","type":"exact"},{"name":"jejunal delta cell somatostatin producing tumour","type":"exact"},{"name":"jejunal somatostatin producing tumor","type":"exact"},{"name":"jejunal somatostatin producing tumour","type":"exact"},{"name":"jejunal somatostatin-producing NET","type":"exact"},{"name":"jejunal somatostatin-producing neuroendocrine tumor","type":"exact"},{"name":"jejunal somatostatin-producing neuroendocrine tumour","type":"exact"}],"termid":"MONDO:0002563","xrefs":{"Monarch":{"xref_id":"0002563"}}}


id: PBO:0080349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 1 pseudogene","termid":"PBO:0080349"}


id: MONDO:1011427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, non-human animal","secondary_identifiers":["OMIA:001993"],"termid":"MONDO:1011427","xrefs":{"Monarch":{"xref_id":"1011427"}}}


id: PBO:0084994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent quinone reductase; GFP-tagged protein localizes to the cytoplasm and nucleus; has similarity to E. coli quinone oxidoreductase and to human zeta-crystallin","termid":"PBO:0084994"}


id: GO:0106271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinose + NADP+ = D-arabinono-1,4-lactone + NADPH.","definition_xrefs":["RHEA:21892"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-arabinose 1-dehydrogenase [NAD(P)+] activity","termid":"GO:0045290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"D-arabinose 1-dehydrogenase (NADP+) activity","termid":"GO:0106271"}


id: GO:1905125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of glucosylceramidase activity.","definition_xrefs":["GOC:bf","GO_REF:0000059","GOC:TermGenie","GOC:PARL"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of glucosylceramidase activity (obsolete GO:1905125)","synonyms":[{"name":"activation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"narrow"},{"name":"activation of GlcCer-beta-glucosidase activity","type":"narrow"},{"name":"activation of acid beta-glucosidase activity","type":"narrow"},{"name":"activation of beta-D-glucocerebrosidase activity","type":"narrow"},{"name":"activation of beta-glucocerebrosidase activity","type":"narrow"},{"name":"activation of beta-glucosylceramidase activity","type":"narrow"},{"name":"activation of ceramide glucosidase activity","type":"narrow"},{"name":"activation of glucocerebrosidase activity","type":"narrow"},{"name":"activation of glucosphingosine glucosylhydrolase activity","type":"narrow"},{"name":"activation of glucosylceramidase activity","type":"narrow"},{"name":"activation of glucosylcerebrosidase activity","type":"narrow"},{"name":"activation of glucosylsphingosine beta-D-glucosidase activity","type":"narrow"},{"name":"activation of glucosylsphingosine beta-glucosidase activity","type":"narrow"},{"name":"activation of psychosine hydrolase activity","type":"narrow"},{"name":"positive regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"positive regulation of GCase activity","type":"exact"},{"name":"positive regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"positive regulation of acid beta-glucosidase activity","type":"exact"},{"name":"positive regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"positive regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"positive regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"positive regulation of ceramide glucosidase activity","type":"exact"},{"name":"positive regulation of glucocerebrosidase activity","type":"exact"},{"name":"positive regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"positive regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"positive regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"positive regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"positive regulation of psychosine hydrolase activity","type":"exact"},{"name":"up regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"up regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"up regulation of acid beta-glucosidase activity","type":"exact"},{"name":"up regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"up regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"up regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"up regulation of ceramide glucosidase activity","type":"exact"},{"name":"up regulation of glucocerebrosidase activity","type":"exact"},{"name":"up regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"up regulation of glucosylceramidase activity","type":"exact"},{"name":"up regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"up regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"up regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"up regulation of psychosine hydrolase activity","type":"exact"},{"name":"up-regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"up-regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"up-regulation of acid beta-glucosidase activity","type":"exact"},{"name":"up-regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"up-regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"up-regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"up-regulation of ceramide glucosidase activity","type":"exact"},{"name":"up-regulation of glucocerebrosidase activity","type":"exact"},{"name":"up-regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"up-regulation of glucosylceramidase activity","type":"exact"},{"name":"up-regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"up-regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"up-regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"up-regulation of psychosine hydrolase activity","type":"exact"},{"name":"upregulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"upregulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"upregulation of acid beta-glucosidase activity","type":"exact"},{"name":"upregulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"upregulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"upregulation of beta-glucosylceramidase activity","type":"exact"},{"name":"upregulation of ceramide glucosidase activity","type":"exact"},{"name":"upregulation of glucocerebrosidase activity","type":"exact"},{"name":"upregulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"upregulation of glucosylceramidase activity","type":"exact"},{"name":"upregulation of glucosylcerebrosidase activity","type":"exact"},{"name":"upregulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"upregulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"upregulation of psychosine hydrolase activity","type":"exact"}],"termid":"GO:1905125"}


id: PBO:0044780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAF1 transcription factor","termid":"PBO:0044780"}


id: PBO:0055371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2800","termid":"PBO:0055371"}


id: PBO:0002833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA elimination defective protein Red1","termid":"PBO:0002833"}


id: SO:0000742
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A maxicircle is a replicon, part of a kinetoplast, that contains open reading frames and replicates via a rolling circle method.","definition_xrefs":["PMID:8395055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"replicon","termid":"SO:0001235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maxicircle","secondary_identifiers":["SO:0000827"],"synonyms":[{"name":"maxicircle_chromosome","type":"exact"}],"termid":"SO:0000742"}


id: GO:0045906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of vasoconstriction.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vasoconstriction","termid":"GO:0019229"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"vasoconstriction","termid":"GO:0042310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vasoconstriction","synonyms":[{"name":"down regulation of vasoconstriction","type":"exact"},{"name":"down-regulation of vasoconstriction","type":"exact"},{"name":"downregulation of vasoconstriction","type":"exact"},{"name":"inhibition of vasoconstriction","type":"narrow"}],"termid":"GO:0045906"}


id: PBO:0114536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3818 and PXA domain conserved fungal protein, implicated in lipid metabolism/ membrane organization or vesicle-mediated transport","termid":"PBO:0114536"}


id: FYPO:0001462
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell during vegetative growth","termid":"FYPO:0001323"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"altered cellular calcium level","synonyms":[{"name":"abnormal cellular calcium accumulation","type":"related"},{"name":"abnormal cellular calcium level","type":"exact"},{"name":"altered cellular calcium ion level","type":"exact"},{"name":"altered cellular calcium level during mitotic cell cycle","type":"related"},{"name":"altered cellular calcium level during vegetative growth","type":"exact"}],"termid":"FYPO:0001462"}


id: GO:0004338
data:
  {"annotated_genes":["SJAG_02192","SJAG_01171","SJAG_03646","SJAG_01888","SJAG_05001"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72441,72544,75215,79008,97118],"is_not":false,"summary":null,"term":"GO:0004338"}]},"cv_name":"molecular_function","definition":"Catalysis of the successive hydrolysis of beta-D-glucose units from the non-reducing ends of (1->3)-beta-D-glucans, releasing alpha-glucose.","definition_xrefs":["EC:3.2.1.58"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01171":null,"SJAG_01888":null,"SJAG_02192":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"glucan exo-1,3-beta-glucosidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:3.2.1.58-RXN"],"synonyms":[{"name":"1,3-beta-glucan glucohydrolase activity","type":"broad"},{"name":"beta-1,3-glucan exo-hydrolase activity","type":"related"},{"name":"exo (1->3)-beta-glucanase activity","type":"related"},{"name":"exo-1,3-beta-D-glucanase activity","type":"related"},{"name":"exo-1,3-beta-glucanase activity","type":"related"},{"name":"exo-1,3-beta-glucosidase activity","type":"related"},{"name":"exo-beta-(1->3)-D-glucanase activity","type":"related"},{"name":"exo-beta-(1->3)-glucanohydrolase activity","type":"related"},{"name":"exo-beta-1,3-D-glucanase activity","type":"related"},{"name":"exo-beta-1,3-glucanase activity","type":"related"},{"name":"glucan 1,3-beta-glucosidase activity","type":"broad"}],"termid":"GO:0004338","terms_by_termid":{"GO:0004338":null}}


id: FYPO:0003531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which peroxisome size is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal subcellular component during vegetative growth","termid":"FYPO:0001313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal peroxisome size","synonyms":[{"name":"normal peroxisome size during mitotic cell cycle","type":"related"},{"name":"normal peroxisome size during vegetative growth","type":"exact"}],"termid":"FYPO:0003531"}


id: PR:Q10412
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rsc58 gene.","definition_xrefs":["UniProtKB:Q10412","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin structure-remodeling complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1F3.07c","synonyms":[{"name":"RSC complex subunit rsc58 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-rsc58","type":"exact"}],"termid":"PR:Q10412"}


id: PBO:0083626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 Ub-ligase (N-recognin); recognizes and ubiquitinates N-end rule pathway substrates in complex with Rad6p; Roq1p-bound form accelerates degradation of misfolded and native ER membrane and cytosolic proteins as part of the stress-induced homeostatically regulated protein degradation (SHRED) pathway; role in ER-associated protein degradation; modifies Cup9p to regulate peptide transport; mutation in human UBR1 causes Johansson-Blizzard Syndrome (JBS)","termid":"PBO:0083626"}


id: PR:O43031
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cwf28 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf28 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC3B9.02c","synonyms":[{"name":"Spom972h-cwf28","type":"exact"},{"name":"complexed with cdc5 protein 28 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43031"}


id: GO:0061179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the regulated release of insulin that contributes to the response of a cell to glucose.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of insulin secretion","termid":"GO:0046676"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0061178"},{"relation_name":"negatively_regulates","term_name":"insulin secretion involved in cellular response to glucose stimulus","termid":"GO:0035773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of insulin secretion involved in cellular response to glucose stimulus","synonyms":[{"name":"negative regulation of insulin secretion in response to glucose","type":"related"},{"name":"negative regulation of insulin secretion involved in cellular response to glucose","type":"exact"}],"termid":"GO:0061179"}


id: PBO:0056525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 2 receptor","termid":"PBO:0056525"}


id: PBO:0051254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-22-2 (pseudogene)","termid":"PBO:0051254"}


id: PBO:0088232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIA machinery protein Cia2","termid":"PBO:0088232"}


id: GO:1901286
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving iron-sulfur-molybdenum cofactor.","definition_xrefs":["GOC:TermGenie","GOC:yaf","UniPathway:UPA00782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"iron-sulfur-molybdenum cofactor metabolic process","synonyms":[{"name":"FeMo-co metabolic process","type":"exact"},{"name":"FeMo-co metabolism","type":"exact"},{"name":"iron-molybdenum cofactor metabolic process","type":"exact"},{"name":"iron-molybdenum cofactor metabolism","type":"exact"},{"name":"iron-sulfur-molybdenum cofactor metabolism","type":"exact"}],"termid":"GO:1901286"}


id: GO:0016357
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyrethroid susceptibility/resistance (obsolete GO:0016357)","synonyms":[{"name":"pyrethroid susceptibility/resistance","type":"exact"}],"termid":"GO:0016357"}


id: PBO:0050286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H6 family homeobox 3","termid":"PBO:0050286"}


id: PR:Q9UUG9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tuberin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR10063:SF1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberous sclerosis 2 protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC630.13c","secondary_identifiers":["UniProtKB:Q9UUG9"],"synonyms":[{"name":"SPAC630.13c","type":"related"},{"name":"Spom972h-TSC2","type":"exact"}],"termid":"PR:Q9UUG9"}


id: PBO:0004306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hira protein Slm9","termid":"PBO:0004306"}


id: PBO:0049831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"haloacid dehalogenase like hydrolase domain containing 2","termid":"PBO:0049831"}


id: MONDO:0016060
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A laryngo-tracheo-esophageal cleft (LC) is a congenital malformation characterized by an abnormal, posterior, sagittal communication between the larynx and the pharynx, possibly extending downward between the trachea and the esophagus.","definition_xrefs":["Orphanet:2004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tracheal disorder","termid":"MONDO:0002567"},{"relation_name":"is_a","term_name":"esophageal disorder","termid":"MONDO:0003749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"laryngotracheoesophageal cleft","secondary_identifiers":["icd11.foundation:271795917","MESH:C537875","SCTID:232461002","NCIT:C98622","GARD:3188"],"synonyms":[{"name":"LC","type":"exact"},{"name":"LTEC","type":"exact"},{"name":"Larnygeotracheoesophageal cleft","type":"exact"},{"name":"congenital cleft larynx","type":"exact"},{"name":"laryngeal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal cleft","type":"exact"},{"name":"laryngo-tracheo-esophageal diastema","type":"exact"},{"name":"tracheal cleft","type":"exact"}],"termid":"MONDO:0016060","xrefs":{"Monarch":{"xref_id":"0016060"}}}


id: GO:0102854
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:2-2-18:1-phosphatidylcholine + O2 + a reduced electron acceptor = 1-18:3-2-18:1-phosphatidylcholine + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:2-2-18:1-phosphatidylcholine desaturase activity (obsolete GO:0102854)","termid":"GO:0102854"}


id: GO:0099601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neurotransmitter receptor activity. Modulation may be via an effect on ligand affinity, or effector function such as ion selectivity or pore opening/closing in ionotropic receptors.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of neurotransmitter receptor activity","termid":"GO:0099601"}


id: PBO:0109382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 13","termid":"PBO:0109382"}


id: MONDO:0024235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually benign tumor composed of solid and cystic nests of epithelial cells resembling transitional epithelium; it is surrounded by an abundant stromal component that is dense and fibroblastic in nature.","definition_xrefs":["NCIT:C39954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system neoplasm","termid":"MONDO:0006054"},{"relation_name":"is_a","term_name":"transitional cell neoplasm","termid":"MONDO:0037254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brenner tumor","secondary_identifiers":["MESH:D001948","ONCOTREE:BTOV","MEDGEN:1645498","UMLS:C4551593","ICDO:9000/0"],"synonyms":[{"name":"Brenner tumor","type":"exact"}],"termid":"MONDO:0024235","xrefs":{"Monarch":{"xref_id":"0024235"}}}


id: GO:0006566
data:
  {"annotated_genes":["SJAG_03152","SJAG_00432","SJAG_02450","SJAG_03141","SJAG_00881","SJAG_00234"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[78952,65736,71624,62316,114027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving threonine (2-amino-3-hydroxybutyric acid), a polar, uncharged, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspartate family amino acid metabolic process","termid":"GO:0009066"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00234":null,"SJAG_00432":null,"SJAG_00881":null,"SJAG_02450":null,"SJAG_03141":null,"SJAG_03152":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"threonine metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["UM-BBD_pathwayID:met"],"synonyms":[{"name":"methionine and threonine metabolic process","type":"broad"},{"name":"methionine and threonine metabolism","type":"broad"},{"name":"threonine metabolism","type":"exact"}],"termid":"GO:0006566","terms_by_termid":{"GO:0006567":null,"GO:0009088":null}}


id: FYPO:0004619
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the cell does not contain detectable cytoplasmic microtubules nucleated from the equatorial microtubule organizing center (eMTOC).","definition_xrefs":["PMID:15772152","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubules absent from cell","termid":"FYPO:0004702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000002","FYPO:0002399","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"cytoplasmic microtubules nucleated from eMTOC absent from cell","synonyms":[{"name":"cytoplasmic microtubules nucleated from eMTOC absent from cell during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules nucleated from eMTOC absent from cell during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules nucleated from equatorial microtubule organizing center absent from cell","type":"exact"}],"termid":"FYPO:0004619"}


id: PATO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001170 numerical value (obsolete PATO:0001170)","termid":"PATO:0001170"}


id: PBO:0061620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 4 pseudogene 2","termid":"PBO:0061620"}


id: GO:0150116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell-substrate junction organization.","definition_xrefs":["GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"cell-substrate junction organization","termid":"GO:0150115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell-substrate junction organization","termid":"GO:0150116"}


id: GO:0060235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signaling at short range between the head ectoderm and the optic vesicle that results in the head ectoderm forming a lens.","definition_xrefs":["ISBN:0878932437","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental induction","termid":"GO:0031128"},{"relation_name":"part_of","term_name":"lens morphogenesis in camera-type eye","termid":"GO:0002089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens induction in camera-type eye","termid":"GO:0060235"}


id: GO:1904380
data:
  {"annotated_genes":["SJAG_01858"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68400],"is_not":false,"summary":null,"term":"GO:1904380"}]},"cv_name":"biological_process","definition":"Any protein alpha-1,2-demannosylation that takes place in the endoplasmic reticulum quality control compartment (ERQC).","definition_xrefs":["GOC:PARL","PMID:24519966","GOC:bf","GOC:TermGenie","GO_REF:0000062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alpha-1,2-demannosylation","termid":"GO:0036508"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01858":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endoplasmic reticulum mannose trimming","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["Reactome:R-HSA-901032"],"synonyms":[{"name":"ER mannose trimming","type":"exact"},{"name":"ER protein alpha-1,2-demannosylation","type":"exact"},{"name":"glycoprotein mannose trimming in ER quality control compartment","type":"related"},{"name":"glycoprotein mannose trimming in ER-derived quality control compartment","type":"related"},{"name":"glycoprotein mannose trimming in ERQC","type":"related"},{"name":"glycoprotein mannose trimming in endoplasmic reticulum quality control compartment","type":"related"},{"name":"protein alpha-1,2-demannosylation in ER","type":"exact"},{"name":"protein alpha-1,2-demannosylation in ER quality control compartment","type":"exact"},{"name":"protein alpha-1,2-demannosylation in ER-derived quality control compartment","type":"related"},{"name":"protein alpha-1,2-demannosylation in ERQC","type":"exact"},{"name":"protein alpha-1,2-demannosylation in endoplasmic reticulum","type":"exact"},{"name":"protein alpha-1,2-demannosylation in endoplasmic reticulum quality control compartment","type":"exact"}],"termid":"GO:1904380","terms_by_termid":{"GO:1904380":null}}


id: FYPO:0006749
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more transfer RNA precursor(s) (pre-tRNA) measured in a cell is higher than normal. Total pre-tRNA or a specific pre-tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered tRNA or precursor level during vegetative growth","termid":"FYPO:0008101"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"increased pre-tRNA level during vegetative growth","synonyms":[{"name":"increased pre-tRNA accumulation during vegetative growth","type":"related"},{"name":"increased pre-tRNA level during mitotic cell cycle","type":"related"},{"name":"increased pre-tRNA transcript level during vegetative growth","type":"exact"},{"name":"increased tRNA level during vegetative growth","type":"broad"},{"name":"increased tRNA primary transcript level during vegetative growth","type":"exact"},{"name":"increased transfer RNA precursor level during vegetative growth","type":"exact"}],"termid":"FYPO:0006749"}


id: PBO:0043420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTD nuclear envelope phosphatase 1 regulatory subunit 1","termid":"PBO:0043420"}


id: MONDO:0014978
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any preimplantation embryonic lethality in which the cause of the disease is a mutation in the PADI6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"gene_count":0,"genotype_count":0,"name":"obsolete preimplantation embryonic lethality 2 (obsolete MONDO:0014978)","secondary_identifiers":["OMIM:617234"],"synonyms":[{"name":"PADI6 preimplantation embryonic lethality","type":"exact"},{"name":"PREMBL2","type":"exact"},{"name":"preimplantation embryonic lethality 2","type":"exact"},{"name":"preimplantation embryonic lethality 2; PREMBL2","type":"exact"},{"name":"preimplantation embryonic lethality caused by mutation in PADI6","type":"exact"},{"name":"preimplantation embryonic lethality type 2","type":"exact"}],"termid":"MONDO:0014978","xrefs":{"Monarch":{"xref_id":"0014978"}}}


id: PBO:0108567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"armadillo-type fold protein, human IFRD1 ortholog, implicated in transcription or signaling","termid":"PBO:0108567"}


id: PBO:0036186
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K4_dimethylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036186"}


id: GO:0019614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of catechol-containing compounds. Catechol is a compound containing a pyrocatechol nucleus or substituent.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"catechol-containing compound catabolic process","synonyms":[{"name":"catechol breakdown","type":"related"},{"name":"catechol catabolic process","type":"related"},{"name":"catechol catabolism","type":"related"},{"name":"catechol degradation","type":"related"}],"termid":"GO:0019614"}


id: PBO:0065422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 8","termid":"PBO:0065422"}


id: PR:Q7LKZ7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lvs1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7LKZ7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beige protein homolog 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.06c","synonyms":[{"name":"Spom972h-lvs1","type":"exact"}],"termid":"PR:Q7LKZ7"}


id: PBO:0087953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation termination and ribosome biogenesis factor; ATP binding cassette protein that cosediments with polysomes and is required for biogenesis of the small ribosomal subunit; Asn/Gln-rich rich region supports [NU+] prion formation and susceptibility to [PSI+] prion induction","termid":"PBO:0087953"}


id: PBO:0075937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stabilin 2","termid":"PBO:0075937"}


id: MONDO:0010751
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unique green phenomenon","secondary_identifiers":["OMIM:314380","MEDGEN:326816","UMLS:C1839116"],"synonyms":[{"name":"unique green phenomenon","type":"exact"}],"termid":"MONDO:0010751","xrefs":{"Monarch":{"xref_id":"0010751"}}}


id: MONDO:0035713
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete FOXG1 syndrome due to intragenic alteration (obsolete MONDO:0035713)","secondary_identifiers":["GARD:22402"],"termid":"MONDO:0035713","xrefs":{"Monarch":{"xref_id":"0035713"}}}


id: MONDO:0006911
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete placental site trophoblastic tumor (obsolete MONDO:0006911)","termid":"MONDO:0006911","xrefs":{"Monarch":{"xref_id":"0006911"}}}


id: GO:0071410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cyclopentenone stimulus. Cyclopentenones are oxylipins derived from polyunsaturated fatty acids. They are structurally similar to jasmonic acid, but contain a reactive unsaturated carbonyl structure in the cyclo-ring. Cyclopentenones include phytoprostanes and 12-oxo-phytodienoic acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cyclopentenone","termid":"GO:0010583"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cyclopentenone","termid":"GO:0071410"}


id: MONDO:0017510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adactyly of foot","termid":"MONDO:0018563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"adactyly of foot, bilateral","secondary_identifiers":["Orphanet:295118","UMLS:C5395377","MEDGEN:1718340"],"synonyms":[{"name":"congenital absence of toes, bilateral","type":"exact"}],"termid":"MONDO:0017510","xrefs":{"Monarch":{"xref_id":"0017510"}}}


id: GO:0042149
data:
  {"annotated_genes":["SJAG_03486","SJAG_00534","SJAG_03602","SJAG_01245","SJAG_03048","SJAG_02380","SJAG_02785"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59214,71966,78001,78034,100439,102459],"is_not":false,"summary":null,"term":"GO:0042149"},{"annotations":[104404],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of deprivation of glucose.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to starvation","termid":"GO:0009267"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00534":null,"SJAG_01245":null,"SJAG_02380":null,"SJAG_02785":null,"SJAG_03048":null,"SJAG_03486":null,"SJAG_03602":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to glucose starvation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0042149","terms_by_termid":{"GO:0042149":null,"GO:1904547":null}}


id: GO:1903601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving thermospermine.","definition_xrefs":["PMID:24906355","GO_REF:0000068","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine metabolic process","termid":"GO:0006595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"thermospermine metabolic process","synonyms":[{"name":"thermospermine metabolism","type":"exact"}],"termid":"GO:1903601"}


id: GO:0043973
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H3 by the addition of an acetyl group to a lysine residue at position 4 of the histone.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H3-K4 acetylation (obsolete GO:0043973)","synonyms":[{"name":"histone H3 acetylation at K4","type":"exact"},{"name":"histone H3K4 acetylation","type":"exact"}],"termid":"GO:0043973"}


id: FYPO:0002182
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and spheroid vegetative cells. The spheroid cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and spheroid cells (obsolete FYPO:0002182)","synonyms":[{"name":"inviable mixed population including spores, germinated spores and rounded cells","type":"exact"}],"termid":"FYPO:0002182"}


id: GO:0040006
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Attaching of a protein-based cuticle to the epithelium underlying it.","definition_xrefs":["GOC:jl","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-based cuticle attachment to epithelium (obsolete GO:0040006)","synonyms":[{"name":"cuticular attachment to epithelium","type":"broad"},{"name":"protein-based cuticle attachment to epithelium","type":"exact"}],"termid":"GO:0040006"}


id: GO:0061762
data:
  {"annotated_genes":["SJAG_03802","SJAG_03501","SJAG_03486"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118201,118540,120299],"is_not":false,"summary":null,"term":"GO:0061762"}]},"cv_name":"biological_process","definition":"The series of molecular signals in which calmodulin-dependent protein kinase activity enabled by a CAMKK directly activates an AMPK. The cascade begins with calmodulin binding calcium which in turn binds CAMKK enabling its calmodulin-dependent protein kinase activity. The cascade ends with AMP-activated protein kinase activity.","definition_xrefs":["PMID:24709372","GOC:PARL","PMID:23010169","GOC:dph","GOC:pad"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcium-mediated signaling","termid":"GO:0019722"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03486":null,"SJAG_03501":null,"SJAG_03802":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CAMKK-AMPK signaling cascade","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stress-activated AMP-activated protein kinase signaling cascade","type":"related"}],"termid":"GO:0061762","terms_by_termid":{"GO:0061762":null}}


id: PBO:0046638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 19","termid":"PBO:0046638"}


id: PBO:0026892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_2_residues_during_vegetative_growth","termid":"PBO:0026892"}


id: MONDO:0003716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papillary transitional cell carcinoma that arises from the renal pelvis.","definition_xrefs":["NCIT:P378","NCIT:C6148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal pelvis papillary tumor","termid":"MONDO:0003717"},{"relation_name":"is_a","term_name":"renal pelvis urothelial carcinoma","termid":"MONDO:0005221"},{"relation_name":"is_a","term_name":"papillary transitional cell carcinoma","termid":"MONDO:0006350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"renal pelvis papillary urothelial carcinoma","secondary_identifiers":["MEDGEN:237178","UMLS:C1377909","DOID:5973"],"synonyms":[{"name":"kidney pelvis papillary carcinoma","type":"exact"},{"name":"papillary carcinoma of kidney pelvis","type":"exact"},{"name":"papillary carcinoma of renal pelvis","type":"exact"},{"name":"papillary carcinoma of the kidney pelvis","type":"exact"},{"name":"papillary carcinoma of the renal pelvis","type":"exact"},{"name":"renal pelvis papillary carcinoma","type":"exact"},{"name":"renal pelvis papillary urothelial carcinoma","type":"exact"}],"termid":"MONDO:0003716","xrefs":{"Monarch":{"xref_id":"0003716"}}}


id: MONDO:0013112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any bronchiectasis in which the cause of the disease is a mutation in the SCNN1G gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"idiopathic bronchiectasis","termid":"MONDO:0018956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiectasis with or without elevated sweat chloride 3","secondary_identifiers":["GARD:18056","MEDGEN:414351","DOID:0080528","MESH:C567772","OMIM:613071","UMLS:C2751324"],"synonyms":[{"name":"BESC3","type":"related"},{"name":"SCNN1G bronchiectasis","type":"exact"},{"name":"bronchiectasis caused by mutation in SCNN1G","type":"exact"},{"name":"bronchiectasis with or without elevated sweat chloride 3","type":"exact"},{"name":"bronchiectasis with or without elevated sweat chloride type 3","type":"exact"},{"name":"cystic fibrosis-like syndrome","type":"related"}],"termid":"MONDO:0013112","xrefs":{"Monarch":{"xref_id":"0013112"}}}


id: MONDO:0013114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant nonsyndromic deafness that is characterized postlingual onset in the second decade of life with flat progressive hearing loss and has material basis in mutation in the MIRN96 gene on chromosome 7q32.","definition_xrefs":["PMID:19363479","DOID:0110576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant nonsyndromic hearing loss","termid":"MONDO:0019587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant nonsyndromic hearing loss 50","secondary_identifiers":["GARD:18132","OMIM:613074","UMLS:C3888123","MEDGEN:854780"],"synonyms":[{"name":"DFNA50","type":"narrow"},{"name":"autosomal dominant deafness 50","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness 50","type":"narrow"},{"name":"autosomal dominant nonsyndromic deafness type 50","type":"narrow"},{"name":"deafness, autosomal dominant 50","type":"related"},{"name":"deafness, autosomal dominant type 50","type":"narrow"}],"termid":"MONDO:0013114","xrefs":{"Monarch":{"xref_id":"0013114"}}}


id: PBO:0064015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 49","termid":"PBO:0064015"}


id: GO:0047377
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene + H2O = 5-(3-hydroxy-4-acetoxybut-1-ynyl)-2,2'-bithiophene + acetate + H+.","definition_xrefs":["RHEA:16313","EC:3.1.1.66"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"},{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0019213","GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene deacetylase activity","secondary_identifiers":["KEGG_REACTION:R04525","MetaCyc:3.1.1.66-RXN"],"synonyms":[{"name":"3,4-diacetoxybutinylbithiophene:4-acetate esterase activity","type":"related"},{"name":"5-(3,4-diacetoxybut-1-ynyl)-2,2'-bithiophene acetylhydrolase activity","type":"related"},{"name":"diacetoxybutynylbithiophene acetate esterase activity","type":"related"}],"termid":"GO:0047377"}


id: GO:1903056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of melanosome organization.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","GO_REF:0000058","PMID:24769727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"melanosome organization","termid":"GO:0032438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of melanosome organization","synonyms":[{"name":"regulation of melanosome organisation","type":"exact"},{"name":"regulation of melanosome organization and biogenesis","type":"related"}],"termid":"GO:1903056"}


id: GO:0048323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an axial mesoderm cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate determination","termid":"GO:0007500"},{"relation_name":"part_of","term_name":"axial mesodermal cell fate commitment","termid":"GO:0048322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell fate determination","synonyms":[{"name":"axial mesoderm cell fate determination","type":"exact"}],"termid":"GO:0048323"}


id: GO:0141169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An epigenetic cytosine DNA demethylation pathway that involves a DNA glycosylase that directly excises 5-methylcytosine (5-meC) to initiate its replacement with unmethylated cytosine through base excision repair. This pathway is known to occur in plants. In addition to CG sites, plants also methylate cytosines within CHH and CNG sequences.","definition_xrefs":["PMID:36478523","PMID:31546611","PMID:21862972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal 5-methylcytosine DNA demethylation pathway","termid":"GO:0141166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"chromosomal 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","synonyms":[{"name":"epigenetic 5-methylcytosine DNA demethylation, direct 5-methylcytosine excision pathway","type":"related"}],"termid":"GO:0141169"}


id: FYPO:0006140
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of 1-eicosenoylglycerophosphocholine (20:1n9) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah","PMID:28667014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phospholipid level","termid":"FYPO:0001288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level","synonyms":[{"name":"increased 1-eicosenoylglycerophosphocholine (20:1n9) accumulation","type":"related"},{"name":"increased cellular 1-(11Z)-icosenoyl-sn-glycero-3-phosphocholine level","type":"exact"},{"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level during mitotic cell cycle","type":"related"},{"name":"increased cellular 1-eicosenoylglycerophosphocholine (20:1n9) level during vegetative growth","type":"exact"}],"termid":"FYPO:0006140"}


id: GO:0046441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving D-lysine, the D-enantiomer of lysine; i.e. (2R)-2,6-diaminohexanoic acid.","definition_xrefs":["GOC:ai","GOC:mah","GOC:jsg"],"gene_count":0,"genotype_count":0,"name":"obsolete D-lysine metabolic process (obsolete GO:0046441)","synonyms":[{"name":"D-lysine metabolism","type":"exact"}],"termid":"GO:0046441"}


id: PBO:0073433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3b subunit 3","termid":"PBO:0073433"}


id: GO:0070753
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-35 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-35 production","secondary_identifiers":["GO:0072626","GO:0070749"],"synonyms":[{"name":"IL-35 production","type":"exact"},{"name":"interleukin-35 biosynthetic process","type":"narrow"},{"name":"interleukin-35 secretion","type":"narrow"}],"termid":"GO:0070753"}


id: MONDO:0958231
data:
  {"annotated_genes":["SJAG_00686"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89111],"is_not":false,"summary":null,"term":"MONDO:0958231"}]},"cv_name":"mondo","definition":"Any neurodevelopmental disorder characterized by global developmental delay, impaired intellectual development, poor overall growth, severely impaired motor development, and dysmorphic facial features due to a variation in the PUM1 gene.","definition_xrefs":["OMIM:620719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monogenic epilepsy","termid":"MONDO:0015653"},{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia type I","termid":"MONDO:0019792"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005027","MONDO:0002039","MONDO:0005559","MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with motor abnormalities, seizures, and facial dysmorphism","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:589515"],"synonyms":[{"name":"PUM1-associated developmental disability-ataxia-seizure syndrome","type":"exact"}],"termid":"MONDO:0958231","terms_by_termid":{"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0958231"}}}


id: GO:0048750
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the compound eye corneal lens are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"compound eye morphogenesis","termid":"GO:0001745"},{"relation_name":"part_of","term_name":"compound eye corneal lens development","termid":"GO:0048058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"compound eye corneal lens morphogenesis","termid":"GO:0048750"}


id: PBO:0073262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 7 pseudogene 6","termid":"PBO:0073262"}


id: MONDO:0022321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of amino acid metabolism","termid":"MONDO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"2-methylacetoacetyl CoA thiolase deficiency","secondary_identifiers":["UMLS:C2930874","GARD:8382","MEDGEN:419652","MESH:C535307"],"termid":"MONDO:0022321","xrefs":{"Monarch":{"xref_id":"0022321"}}}


id: PBO:0002538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein (predicted)","termid":"PBO:0002538"}


id: FYPO:0005367
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, contains one nucleus, has no septum, and progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell cycle arrest at mitotic G2/M phase transition","termid":"FYPO:0000400"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000004","FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"inviable mononucleate aseptate cell with cell cycle arrest at mitotic G2/M phase transition","synonyms":[{"name":"inviable mononucleate aseptate cell with mitotic cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell arrested at G2/M","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"inviable mononucleate aseptate vegetative cell with mitotic G2/M phase transition arrest","type":"exact"},{"name":"inviable mononucleate aseptate vegetative cell with mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"lethal; mononucleate aseptate vegetative cell with cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic G2-phase arrested inviable mononucleate aseptate vegetative cell","type":"related"},{"name":"mitotic cell cycle arrest in G2-phase with inviable mononucleate aseptate cell","type":"related"}],"termid":"FYPO:0005367"}


id: PBO:0062164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 5","termid":"PBO:0062164"}


id: PBO:0054606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2011","termid":"PBO:0054606"}


id: MONDO:0007467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA, low-repetitive sequences of","secondary_identifiers":["UMLS:C1852041","MEDGEN:342148","OMIM:126390"],"synonyms":[{"name":"DNA, low-repetitive sequences of","type":"exact"},{"name":"repetitive sequence DNA","type":"related"}],"termid":"MONDO:0007467","xrefs":{"Monarch":{"xref_id":"0007467"}}}


id: PBO:0001640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway protein Sec39 (predicted)","termid":"PBO:0001640"}


id: GO:0160220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (R)-lactate + ATP + D-alanine = ADP + D-alanyl-(R)-lactate + phosphate.","definition_xrefs":["RHEA:37347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-oxygen bonds","termid":"GO:0016875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"D-alanine-(R)-lactate ligase activity","secondary_identifiers":["MetaCyc:RXN-11298","EC:6.1.2.1","KEGG_REACTION:R09588"],"synonyms":[{"name":"D-alanyl-D-lactate ligase activity","type":"exact"}],"termid":"GO:0160220"}


id: FYPO:0004414
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased during a cellular response to phosphate starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0000654","FYPO:0001985","FYPO:0000661"],"is_obsolete":false,"name":"increased phosphatase activity during cellular response to phosphate starvation","synonyms":[{"name":"increased phosphatase activity during phosphate starvation","type":"exact"}],"termid":"FYPO:0004414"}


id: PBO:0044320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c, somatic","termid":"PBO:0044320"}


id: PBO:0061485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRG3 antisense RNA 1","termid":"PBO:0061485"}


id: FYPO:0001021
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population growth phenotype in which vegetative cells grow normally (i.e. indistinguishably from wild type) during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth during cellular response to osmotic stress","synonyms":[{"name":"normal cell population growth during cellular response to osmotic stress","type":"exact"},{"name":"normal cellular response to osmotic stress","type":"related"},{"name":"normal vegetative cell population growth during cellular response to osmotic stress","type":"exact"}],"termid":"FYPO:0001021"}


id: GO:0102723
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + curcumin = curcumin monoglucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:curcumin glucosyltransferase activity (obsolete GO:0102723)","termid":"GO:0102723"}


id: PBO:0055892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 10B","termid":"PBO:0055892"}


id: MOD:01393
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two serine residues and a cysteine residue by formation of a pyridine-2,5-dicarboxylic acid.","definition_xrefs":["PubMed:1880060","PubMed:10625477","PubMed:7844053","RESID:AA0470"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridinyl ring crosslinked residues","termid":"MOD:01425"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-serine residue","termid":"MOD:02055"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-cysteine pyridine-2,5-dicarboxylic acid","synonyms":[{"name":"6-[(1R)-1-amino-2-sulfanylethyl]pyridine-2,5-dicarboxylic acid","type":"exact"},{"name":"L-cysteine pyridine-2,5-dicarboxylic acid","type":"exact"}],"termid":"MOD:01393"}


id: GO:0005357
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: glucose + H+ = glucose + H+. This activity is constitutive and therefore always present, regardless of demand. Symporter activity enables the active transport of a solute across a membrane by a mechanism whereby two or more species are transported together in the same direction in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["GOC:mtg_transport"],"gene_count":0,"genotype_count":0,"name":"obsolete constitutive glucose:proton symporter activity (obsolete GO:0005357)","synonyms":[{"name":"constitutive hydrogen/glucose transporter activity","type":"broad"},{"name":"constitutive hydrogen:glucose symporter activity","type":"exact"},{"name":"constitutive hydrogen:glucose transporter activity","type":"broad"}],"termid":"GO:0005357"}


id: PBO:0089922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-4 methylsterol oxidase Erg25","termid":"PBO:0089922"}


id: SO:0000611
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A pyrimidine rich sequence near the 3' end of an intron to which the 5'end becomes covalently bound during nuclear splicing. The resulting structure resembles a lariat.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spliceosomal_intron_region","termid":"SO:0000841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"branch_site","synonyms":[{"name":"branch point","type":"exact"},{"name":"branch site","type":"exact"},{"name":"branch_point","type":"exact"}],"termid":"SO:0000611"}


id: MONDO:0010487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-syndromic X-linked intellectual disability in which the cause of the disease is a mutation in the USP9X gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic X-linked intellectual disability","termid":"MONDO:0019181"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 99","secondary_identifiers":["OMIM:300919","UMLS:C3806746","DOID:0112026","MEDGEN:813076","GARD:22693"],"synonyms":[{"name":"MRX99","type":"related"},{"name":"USP9X non-syndromic X-linked intellectual disability","type":"exact"},{"name":"intellectual developmental disorder, X-linked 99, X-linked recessive","type":"exact"},{"name":"intellectual disability, X-linked 99","type":"exact"},{"name":"intellectual disability, X-linked type 99","type":"exact"},{"name":"mental retardation, X-linked 99","type":"related"},{"name":"mental retardation, X-linked type 99","type":"exact"},{"name":"non-syndromic X-linked intellectual disability caused by mutation in USP9X","type":"exact"}],"termid":"MONDO:0010487","xrefs":{"Monarch":{"xref_id":"0010487"}}}


id: PBO:0000268
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.1.30","termid":"PBO:0000268"}


id: GO:0032950
data:
  {"annotated_genes":["SJAG_01787","SJAG_04509","SJAG_04462","SJAG_01255","SJAG_04771","SJAG_04659","SJAG_04666","SJAG_00610","SJAG_03705","SJAG_04668"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89519,94430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[89903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[107371,92779,94414,69629,107942,119972,120105],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving beta-glucans.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"regulates","term_name":"beta-glucan metabolic process","termid":"GO:0051273"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00610":null,"SJAG_01255":null,"SJAG_01787":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of beta-glucan metabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of beta-glucan metabolism","type":"exact"}],"termid":"GO:0032950","terms_by_termid":{"GO:0032951":null,"GO:0090334":null,"GO:0140748":null}}


id: GO:0061694
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A catalytic protein complex that is capable of alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase activity.","definition_xrefs":["PMID:22089136","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase complex, transferring phosphorus-containing groups","termid":"GO:0061695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alpha-D-ribose 1-methylphosphonate 5-triphosphate synthase complex","termid":"GO:0061694"}


id: FYECO:0000298
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which zymolyase was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ zymolyase","termid":"FYECO:0000298"}


id: GO:0032547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a purine deoxyribonucleoside, a compound consisting of a purine base linked to deoxyribose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside binding","termid":"GO:0001883"},{"relation_name":"is_a","term_name":"deoxyribonucleoside binding","termid":"GO:0032546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"purine deoxyribonucleoside binding","termid":"GO:0032547"}


id: MONDO:0850345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pleomorphic carcinoma that is characterized by the presence of malignant glandular or squamous cells associated with malignant giant and spindle cells and that is located in the lung.","definition_xrefs":["DOID:0080899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pleomorphic carcinoma","termid":"MONDO:0003573"},{"relation_name":"is_a","term_name":"lung sarcomatoid carcinoma","termid":"MONDO:0006279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung pleomorphic carcinoma","secondary_identifiers":["UMLS:C1711397","NCIT:C45542","MEDGEN:314017"],"termid":"MONDO:0850345","xrefs":{"Monarch":{"xref_id":"0850345"}}}


id: FYPO:0003828
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of the ribosomal small subunit protein S6 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:24463365","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0001320"],"is_obsolete":false,"name":"normal ribosomal S6 protein phosphorylation during vegetative growth","synonyms":[{"name":"normal ribosomal S6 protein phosphorylation during mitotic cell cycle","type":"related"},{"name":"normal ribosome S6 phosphorylation during vegetative growth","type":"exact"}],"termid":"FYPO:0003828"}


id: SO:0002231
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An RNA that catalyzes its own cleavage.","direct_ancestors":[{"relation_name":"has_quality","term_name":"ribonuclease_site","termid":"SO:0001977"},{"relation_name":"is_a","term_name":"ribozyme","termid":"SO:0000374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"self_cleaving_ribozyme","synonyms":[{"name":"self cleaving ribozyme","type":"exact"}],"termid":"SO:0002231"}


id: GO:0030522
data:
  {"annotated_genes":["SJAG_02860"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[67832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009785"}]},"cv_name":"biological_process","definition":"The series of molecular signals initiated by a ligand binding to a receptor located within a cell.","definition_xrefs":["GOC:bf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular signal transduction","termid":"GO:0035556"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"intracellular receptor signaling pathway","references_by_uniquename":{"GO_REF:0000108":null},"secondary_identifiers":["Reactome:R-HSA-9024446"],"synonyms":[{"name":"intracellular receptor mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signaling pathway","type":"exact"},{"name":"intracellular receptor-mediated signalling pathway","type":"exact"}],"termid":"GO:0030522","terms_by_termid":{"GO:0009785":null}}


id: MONDO:0007357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colonic varices without portal hypertension","secondary_identifiers":["MESH:C565172","MEDGEN:343875","OMIM:120440","UMLS:C1852721"],"synonyms":[{"name":"colonic varices without portal hypertension","type":"exact"}],"termid":"MONDO:0007357","xrefs":{"Monarch":{"xref_id":"0007357"}}}


id: PBO:0082729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the RNA polymerase II mediator complex; cyclin-dependent protein kinase involved in phosphorylation of the mediator component Pgd1p and suppression of transcription activation by RNA polymerase II; involved in glucose repression","termid":"PBO:0082729"}


id: MONDO:0044881
data:
  {"annotated_genes":["SJAG_01013","SJAG_02460","SJAG_00980","SJAG_01748","SJAG_01349","SJAG_05979","SJAG_03453","SJAG_02527","SJAG_03905"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89215,89372,89218,89373,89217,89216],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[88162,88161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"},{"annotations":[89337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A neoplasm arising from hematopoietic cells found in the bone marrow, peripheral blood, lymph nodes and spleen (organs of the hematopoietic system). Hematopoietic cell neoplasms can also involve other anatomic sites (e.g. central nervous system, gastrointestinal tract), either by metastasis, direct tumor infiltration, or neoplastic transformation of extranodal lymphoid tissues. The commonest forms are the various types of leukemia, Hodgkin and non-Hodgkin lymphomas, myeloproliferative neoplasms, and myelodysplastic syndromes.","definition_xrefs":["NCIT:C27134"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic and lymphoid system neoplasm","termid":"MONDO:0002334"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_02460":null,"SJAG_02527":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hematopoietic and lymphoid cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:91264","UMLS:C0376544"],"synonyms":[{"name":"HEMOLYMPHORETICULAR tumor, malignant","type":"exact"},{"name":"haematological neoplasm","type":"exact"},{"name":"haematological tumour","type":"exact"},{"name":"haematopoietic and lymphoid neoplasms","type":"exact"},{"name":"haematopoietic cancer","type":"exact"},{"name":"haematopoietic cell tumour","type":"exact"},{"name":"haematopoietic malignancy, NOS","type":"exact"},{"name":"haematopoietic neoplasm","type":"exact"},{"name":"haematopoietic neoplasms including lymphomas","type":"exact"},{"name":"haematopoietic tumour","type":"exact"},{"name":"hematologic cancer","type":"exact"},{"name":"hematologic malignancy","type":"exact"},{"name":"hematologic neoplasm","type":"exact"},{"name":"hematological neoplasm","type":"exact"},{"name":"hematological tumor","type":"exact"},{"name":"hematopoietic and lymphoid cell neoplasm","type":"exact"},{"name":"hematopoietic and lymphoid neoplasms","type":"exact"},{"name":"hematopoietic cancer","type":"exact"},{"name":"hematopoietic cell tumor","type":"exact"},{"name":"hematopoietic malignancy, NOS","type":"exact"},{"name":"hematopoietic neoplasm","type":"exact"},{"name":"hematopoietic neoplasms including lymphomas","type":"exact"},{"name":"hematopoietic tumor","type":"exact"},{"name":"hematopoietic, Including myeloma","type":"exact"},{"name":"malignant haematopoietic neoplasm","type":"exact"},{"name":"malignant hematologic neoplasm","type":"exact"},{"name":"malignant hematopoietic neoplasm","type":"exact"}],"termid":"MONDO:0044881","terms_by_termid":{"MONDO:0009693":null,"MONDO:0011508":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0044881"}}}


id: PBO:0077103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIMM9 pseudogene 1","termid":"PBO:0077103"}


id: PBO:0042264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 6A","termid":"PBO:0042264"}


id: GO:0061656
data:
  {"annotated_genes":["SJAG_00604","SJAG_02082"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77627,106499],"is_not":false,"summary":null,"term":"GO:0061656"}]},"cv_name":"molecular_function","definition":"Isoenergetic transfer of SUMO from one protein to another via the reaction X-SUMO + Y = Y-SUMO + X, where both the X-SUMO and Y-SUMO linkages are thioester bonds between the C-terminal amino acid of SUMO and a sulfhydryl side group of a cysteine residue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SUMO transferase activity","termid":"GO:0019789"},{"relation_name":"is_a","term_name":"ubiquitin-like protein conjugating enzyme activity","termid":"GO:0061650"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_02082":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0019787","GO:0016746","GO:0003674","GO:0003824","GO:0140096","GO:0016740"],"is_obsolete":false,"name":"SUMO conjugating enzyme activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"E2","type":"broad"}],"termid":"GO:0061656","terms_by_termid":{"GO:0061656":null}}


id: MONDO:0020520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Adult pulmonary Langerhans Cell Histiocytosis (PLCH) is a rare histiocytic lung disease characterized by the accumulation of Langerhans and other inflammatory cells in the small airways, resulting in the formation of nodular inflammatory lesions.","definition_xrefs":["Orphanet:99874"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Langerhans cell histiocytosis specific to adulthood","termid":"MONDO:0017029"},{"relation_name":"is_a","term_name":"eosinophilic granuloma","termid":"MONDO:0020517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"adult pulmonary Langerhans cell histiocytosis","secondary_identifiers":["ICD10CM:J84.82","MEDGEN:853967","UMLS:C3161104","SCTID:328611000119105","NCIT:C142833","icd11.foundation:792398738"],"synonyms":[{"name":"PLCH","type":"exact"},{"name":"pulmonary Langerhans cell histiocytosis","type":"exact"},{"name":"pulmonary eosinophilic granuloma","type":"exact"},{"name":"pulmonary histiocytosis X","type":"exact"}],"termid":"MONDO:0020520","xrefs":{"Monarch":{"xref_id":"0020520"}}}


id: GO:0072550
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: triferuloyl spermidine + NADPH + O2 = diferuloyl mono-(hydroxyferuloyl) spermidine + NADP+ + H2O.","definition_xrefs":["GOC:kad","PMID:19779199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tri-(feruloyl or hydroxyferuloyl) spermidine meta-hydroxylase activity","termid":"GO:0072532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"triferuloylspermidine meta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-11262"],"synonyms":[{"name":"triferuloyl spermidine meta-hydroxylase activity","type":"exact"}],"termid":"GO:0072550"}


id: SO:0001722
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 36th residue (a lysine), from the start of the H3 histone protein is mono-methylated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"H3K36_methylation_site","termid":"SO:0001733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K36_monomethylation_site","synonyms":[{"name":"H3K36 mono-methylation site","type":"exact"},{"name":"H3K36Me1","type":"related"}],"termid":"SO:0001722"}


id: PBO:0085827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; gene expression increases in cultures shifted to a lower temperature; protein abundance increases in response to DNA replication stress","termid":"PBO:0085827"}


id: PBO:0017672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium ion channel Cch1","termid":"PBO:0017672"}


id: MONDO:0021337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the tonsil.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tonsil cancer","termid":"MONDO:0006998"},{"relation_name":"is_a","term_name":"oropharyngeal carcinoma","termid":"MONDO:0044926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"tonsil carcinoma","secondary_identifiers":["MEDGEN:107535","NCIT:C4825","SCTID:274085008","UMLS:C0558355"],"synonyms":[{"name":"cancer of the tonsil","type":"broad"},{"name":"cancer of tonsil","type":"broad"},{"name":"carcinoma of the tonsil","type":"exact"},{"name":"carcinoma of tonsil","type":"exact"},{"name":"tonsil cancer","type":"broad"},{"name":"tonsil carcinoma","type":"exact"},{"name":"tonsillar cancer","type":"broad"},{"name":"tonsillar carcinoma","type":"exact"}],"termid":"MONDO:0021337","xrefs":{"Monarch":{"xref_id":"0021337"}}}


id: GO:0072435
data:
  {"annotated_genes":["SJAG_04332","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96557,104409],"is_not":false,"summary":null,"term":"GO:0072435"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of mitotic G2/M transition DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle checkpoint signaling","termid":"GO:0072414"},{"relation_name":"is_a","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03048":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to mitotic G2 DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072458"],"synonyms":[{"name":"mitotic G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"mitotic G2/M transition decatenation checkpoint effector process","type":"related"},{"name":"response to mitotic G2/M transition DNA damage checkpoint signaling","type":"exact"},{"name":"response to mitotic G2/M transition decatenation checkpoint signaling","type":"related"},{"name":"response to signal involved in mitotic G2/M transition DNA damage checkpoint","type":"exact"},{"name":"response to signal involved in mitotic G2/M transition decatenation checkpoint","type":"related"}],"termid":"GO:0072435","terms_by_termid":{"GO:0072435":null}}


id: MONDO:0018302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acquired progressive kinking of the hair (APKH) is a rare hair disorder characterized by the appearance of lustreless, curly, frizzy, and coarse hair generally during adolescence predominantly in the frontal, temporal, and vertex regions of the scalp. Eyelashes, as well as growth and pigmentation of the hair, may also be affected.","definition_xrefs":["Orphanet:37559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"acquired kinky hair syndrome","secondary_identifiers":["UMLS:C0263486","GARD:18826","MEDGEN:537918"],"termid":"MONDO:0018302","xrefs":{"Monarch":{"xref_id":"0018302"}}}


id: PBO:0026957
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_rate_of_microtubule_depolymerization_ahead_of_moving_spindle_pole_body","termid":"PBO:0026957"}


id: SO:0002222
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A regulatory_region essential for the specific initiation of transcription at a defined location in a DNA molecule, although this location might not be one single base. It is recognized by a specific RNA polymerase(RNAP)-holoenzyme, and this recognition is not necessarily autonomous.","definition_xrefs":["PMID:32665585"],"direct_ancestors":[{"relation_name":"is_a","term_name":"promoter","termid":"SO:0000167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prokaryotic_promoter","synonyms":[{"name":"Prokaryotic promoter","type":"exact"}],"termid":"SO:0002222"}


id: PBO:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved unknown","termid":"PBO:0000003"}


id: PBO:0047406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 44","termid":"PBO:0047406"}


id: GO:0060930
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The commitment of cells to sinoatrial (SA) node cell fates and their capacity to differentiate into SA node cells. SA node cells are pacemaker cells that are found in the sinoatrial node.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac pacemaker cell fate commitment","termid":"GO:0060927"},{"relation_name":"part_of","term_name":"sinoatrial node cell differentiation","termid":"GO:0060921"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sinoatrial node cell fate commitment","synonyms":[{"name":"SA node cell commitment","type":"exact"},{"name":"SAN cell commitment","type":"exact"},{"name":"sinus node cell commitment","type":"narrow"}],"termid":"GO:0060930"}


id: PBO:0057048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 135b","termid":"PBO:0057048"}


id: PBO:0089660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIP/FAR complex WD repeat (scaffold) subunit, striatin, Far8/Csc3","termid":"PBO:0089660"}


id: MONDO:0000149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete retinopathy (obsolete MONDO:0000149)","termid":"MONDO:0000149","xrefs":{"Monarch":{"xref_id":"0000149"}}}


id: MOD:00721
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively oxygenates an L-methionine residue to L-methionine sulfoxide S-diastereomer.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine sulfoxide","termid":"MOD:00719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-methionine (S)-sulfoxide","synonyms":[{"name":"MOD_RES Methionine (S)-sulfoxide","type":"exact"},{"name":"S-MetO","type":"exact"}],"termid":"MOD:00721"}


id: PBO:0088778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin cortical patch component Lsb4","termid":"PBO:0088778"}


id: GO:0072177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric duct over time, from its initial formation to a mature structure. A mesonephric duct is a tube drains the mesonephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule development","termid":"GO:0072164"},{"relation_name":"is_a","term_name":"nephric duct development","termid":"GO:0072176"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric duct development","synonyms":[{"name":"Wolffian duct development","type":"exact"}],"termid":"GO:0072177"}


id: MONDO:0009525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The distal limb deficiencies-micrognathia syndrome is characterized by the combination of symmetric severe distal limb reduction deficiencies affecting all four limbs (oligodactyly), microretrognathia, and microstomia with or without cleft palate.","definition_xrefs":["Orphanet:1307"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"split hand-foot malformation","termid":"MONDO:0016576"},{"relation_name":"is_a","term_name":"partial duplication of the long arm of chromosome 10","termid":"MONDO:0016961"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split hand-foot malformation 3","secondary_identifiers":["UMLS:C1838652","MEDGEN:325070","GARD:3252","NCIT:C75121","SCTID:722429003","MESH:C565437","DOID:0090025","OMIM:246560"],"synonyms":[{"name":"10q24 microduplication syndrome","type":"exact"},{"name":"Buttiens Fryns syndrome","type":"related"},{"name":"Buttiens-Fryns syndrome","type":"exact"},{"name":"SHFM3","type":"exact"},{"name":"Shsf3","type":"related"},{"name":"chromosome 10Q24 Duplication syndrome","type":"related"},{"name":"chromosome 10q24 duplication syndrome","type":"exact"},{"name":"distal limb deficiencies with micrognathia","type":"exact"},{"name":"distal limb deficiencies-micrognathia syndrome","type":"related"},{"name":"limb deficiencies distal with micrognathia","type":"related"},{"name":"limb deficiencies, distal, with micrognathia","type":"related"},{"name":"split hand-foot malformation 3","type":"exact"},{"name":"split hand-foot malformation type 3","type":"exact"},{"name":"split-hand/foot malformation 3","type":"related"},{"name":"split-hand/foot malformation 3, gene duplication syndrome","type":"exact"},{"name":"split-hand/foot malformation type 3","type":"exact"}],"termid":"MONDO:0009525","xrefs":{"Monarch":{"xref_id":"0009525"}}}


id: GO:0060821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Compensating for the two-fold variation in X-chromosome:autosome ratios between sexes by a global inactivation of all, or most of, the genes on one of the X-chromosomes in the XX sex by a mechanism of DNA methylation.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete inactivation of X chromosome by DNA methylation (obsolete GO:0060821)","termid":"GO:0060821"}


id: PBO:0066006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ral GEF with PH domain and SH3 binding motif 1","termid":"PBO:0066006"}


id: GO:0032531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of a process involved in the formation, arrangement of constituent parts, or disassembly of a microvillus on a follicle cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microvillus organization","termid":"GO:0032530"},{"relation_name":"regulates","term_name":"follicle cell microvillus organization","termid":"GO:0032529"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of follicle cell microvillus organization","synonyms":[{"name":"regulation of follicle cell microvillus organisation","type":"exact"},{"name":"regulation of follicle cell microvillus organization and biogenesis","type":"related"}],"termid":"GO:0032531"}


id: GO:0022410
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A behavioral process involved in the cycle from wakefulness through an orderly succession of sleep states and stages that occurs on an approximately 24 hour rhythm.","definition_xrefs":["GOC:isa_complete"],"direct_ancestors":[{"relation_name":"is_a","term_name":"circadian behavior","termid":"GO:0048512"},{"relation_name":"part_of","term_name":"circadian sleep/wake cycle","termid":"GO:0042745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"circadian sleep/wake cycle process","termid":"GO:0022410"}


id: MONDO:0005641
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A slow progressive disease of mink caused by the aleutian mink disease virus. It is characterized by poor reproduction, weight loss, autoimmunity, hypergammaglobulinemia, increased susceptibility to bacterial infections, and death from renal failure. The disease occurs in all color types, but mink which are homozygous recessive for the Aleutian gene for light coat color are particularly susceptible.","definition_xrefs":["MESH:D000453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parvoviridae infectious disease, non-human animal","termid":"MONDO:0700206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aleutian mink disease","secondary_identifiers":["SCTID:62251004","ICD9:079.89","EFO:0007139"],"synonyms":[{"name":"Aleutian disease","type":"related"},{"name":"Aleutian mink disease virus caused disease or disorder","type":"related"},{"name":"Aleutian mink disease virus disease or disorder","type":"related"},{"name":"Aleutian mink disease virus infectious disease","type":"related"}],"termid":"MONDO:0005641","xrefs":{"Monarch":{"xref_id":"0005641"}}}


id: GO:0022004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process occurring after the brain has been specified along the neural axis that is required for the midbrain-hindbrain boundary to attain its fully functional state. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:dph","GOC:cls","GOC:jid","PMID:15541513","GOC:dgh","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary maturation","termid":"GO:0021732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary maturation during brain development","termid":"GO:0022004"}


id: GO:0000791
data:
  {"annotated_genes":["SJAG_00471","SJAG_03128","SJAG_03047","SJAG_03126","SJAG_00342","SJAG_03844","SJAG_03832","SJAG_03689","SJAG_01717","SJAG_03161","SJAG_03567","SJAG_02849","SJAG_02416"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66599,96343,105426,107401,108216,108293,113319,114008,114100,114153,115437,115658,118038],"is_not":false,"summary":null,"term":"GO:0000791"}]},"cv_name":"cellular_component","definition":"A dispersed and relatively uncompacted form of chromatin that is in a transcription-competent conformation.","definition_xrefs":["PMID:32017156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin","termid":"GO:0000785"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00342":null,"SJAG_00471":null,"SJAG_01717":null,"SJAG_02416":null,"SJAG_02849":null,"SJAG_03047":null,"SJAG_03126":null,"SJAG_03128":null,"SJAG_03161":null,"SJAG_03567":null,"SJAG_03689":null,"SJAG_03832":null,"SJAG_03844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"euchromatin","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["NIF_Subcellular:sao445485807","GO:0005719","Wikipedia:Euchromatin","GO:0035327"],"synonyms":[{"name":"nuclear euchromatin","type":"related"},{"name":"transcriptionally active chromatin","type":"exact"}],"termid":"GO:0000791","terms_by_termid":{"GO:0000791":null}}


id: PBO:0046103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 4B pseudogene 6","termid":"PBO:0046103"}


id: PATO:0001554
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process to oxygen which is lower than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"aerobic (for occurrence)","termid":"PATO:0001459"},{"relation_name":"is_a","term_name":"decreased sensitivity of a process","termid":"PATO:0001552"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity of a process to oxygen","synonyms":[{"name":"low sensitivity of occurrent to oxygen","type":"exact"}],"termid":"PATO:0001554"}


id: GO:0060533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the bronchus cartilage is generated and organized. The bronchus cartilage is the connective tissue of the portion of the airway that connects to the lungs.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cartilage morphogenesis","termid":"GO:0060536"},{"relation_name":"part_of","term_name":"bronchus morphogenesis","termid":"GO:0060434"},{"relation_name":"part_of","term_name":"bronchus cartilage development","termid":"GO:0060532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bronchus cartilage morphogenesis","termid":"GO:0060533"}


id: FYPO:0006485
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol-3,4-bisphosphate measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular phosphoinositide level","termid":"FYPO:0005588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level","synonyms":[{"name":"decreased cellular 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate level","type":"exact"},{"name":"decreased cellular PI(3,4)P2 level","type":"exact"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during mitotic cell cycle","type":"related"},{"name":"decreased cellular phosphatidylinositol-3,4-bisphosphate level during vegetative growth","type":"exact"},{"name":"reduced cellular phosphatidylinositol-3,4-bisphosphate level","type":"exact"}],"termid":"FYPO:0006485"}


id: PBO:0074377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 pseudogene 3","termid":"PBO:0074377"}


id: GO:0031562
data:
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id: GO:0006396
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id: GO:0140312
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  {"annotated_genes":["SJAG_00104","SJAG_02805","SJAG_04565","SJAG_03146","SJAG_01809","SJAG_00800","SJAG_03726","SJAG_00108","SJAG_04931","SJAG_04609","SJAG_01167","SJAG_02453","SJAG_01748","SJAG_00379","SJAG_00152"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108058,112742],"is_not":false,"summary":null,"term":"GO:0140312"},{"annotations":[73949,96198,110379,98148,113556,79695,114846,58891,63027,79572,80205,90915,76408],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035615"}]},"cv_name":"molecular_function","definition":"Binding directly to the structural scaffolding elements of a vesicle coat (such as clathrin or COPII), and bridging the membrane, cargo receptor, and membrane deformation machinery.","definition_xrefs":["PMID:25795254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-macromolecule adaptor activity","termid":"GO:0030674"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00152":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01748":null,"SJAG_01809":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_03146":null,"SJAG_03726":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04931":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0030674","GO:0003674","GO:0060090"],"is_obsolete":false,"name":"cargo adaptor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-203662","Reactome:R-HSA-203565","GO:0098748"],"synonyms":[{"name":"endocytic adaptor activity","type":"narrow"}],"termid":"GO:0140312","terms_by_termid":{"GO:0035615":null,"GO:0140312":null}}


id: GO:0034113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a cell of a different type via adhesion molecules.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"heterotypic cell-cell adhesion","termid":"GO:0034113"}


id: PBO:0060934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor of activated T cells 3","termid":"PBO:0060934"}


id: PBO:0062989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin coregulated like","termid":"PBO:0062989"}


id: MONDO:0009053
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89241,89242],"is_not":false,"summary":null,"term":"MONDO:0009053"}]},"cv_name":"mondo","definition":"ALDH18A1-related De Barsy syndrome combines intellectual deficit, bilateral cataracts, and skin and joint hyperlaxity.","definition_xrefs":["Orphanet:35664"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"de Barsy syndrome","termid":"MONDO:0017569"},{"relation_name":"is_a","term_name":"P5CS deficiency","termid":"MONDO:0100126"},{"relation_name":"is_a","term_name":"inherited cutis laxa","termid":"MONDO:0100237"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0006025","MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"ALDH18A1-related de Barsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5234852","MEDGEN:1720006","ICD9:371.89","GARD:16638","DOID:0070132","OMIM:219150","SCTID:59252009"],"synonyms":[{"name":"ARCL3A","type":"exact"},{"name":"De Barsy syndrome A","type":"exact"},{"name":"De Barsy syndrome a","type":"related"},{"name":"Delta-1-pyrroline 5-carboxylate synthetase deficiency","type":"exact"},{"name":"P5CS deficiency","type":"broad"},{"name":"autosomal recessive cutis laxa type IIIA","type":"related"},{"name":"cutis laxa, autosomal recessive, type 3A","type":"related"},{"name":"cutis laxa, autosomal recessive, type IIIA","type":"related"},{"name":"cutis laxa, corneal clouding, and intellectual disability","type":"related"},{"name":"cutis laxa, corneal clouding, and mental retardation","type":"related"},{"name":"neurocutaneous syndrome, Bicknell type","type":"exact"},{"name":"progeroid syndrome of De Barsy","type":"related"}],"termid":"MONDO:0009053","terms_by_termid":{"MONDO:0009053":null},"xrefs":{"Monarch":{"xref_id":"0009053"}}}


id: GO:1900566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chanoclavine-I.","definition_xrefs":["GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete chanoclavine-I biosynthetic process (obsolete GO:1900566)","synonyms":[{"name":"chanoclavine-I anabolism","type":"exact"},{"name":"chanoclavine-I biosynthesis","type":"exact"},{"name":"chanoclavine-I formation","type":"exact"},{"name":"chanoclavine-I synthesis","type":"exact"}],"termid":"GO:1900566"}


id: MONDO:0008032
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1A (obsolete MONDO:0008032)","termid":"MONDO:0008032","xrefs":{"Monarch":{"xref_id":"0008032"}}}


id: MONDO:1040065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the ARL6 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL6-related ciliopathy","synonyms":[{"name":"ARL6-related ciliopathy","type":"exact"}],"termid":"MONDO:1040065","xrefs":{"Monarch":{"xref_id":"1040065"}}}


id: MONDO:0001494
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A disorder characterized by recurrent sexual urges, fantasies, or behaviors in a heterosexual male involving cross-dressing.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete transvestism (obsolete MONDO:0001494)","secondary_identifiers":["DOID:1233","SCTID:472981000","NCIT:C94359","ICD9:302.3","MESH:D014190"],"synonyms":[{"name":"Transvestic fetishism","type":"exact"},{"name":"cross dresser","type":"exact"},{"name":"dual-role transvestism","type":"exact"}],"termid":"MONDO:0001494","xrefs":{"Monarch":{"xref_id":"0001494"}}}


id: PBO:0062856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otopetrin 1","termid":"PBO:0062856"}


id: PBO:0071401
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 7","termid":"PBO:0071401"}


id: PBO:0063586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 1","termid":"PBO:0063586"}


id: PBO:0051944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-tetrakisphosphate 1-kinase","termid":"PBO:0051944"}


id: FYPO:0000601
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which vacuolar transport is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal transport","termid":"FYPO:0001071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar transport","synonyms":[{"name":"normal vacuolar protein transport","type":"narrow"},{"name":"normal vacuolar transport during mitotic cell cycle","type":"related"},{"name":"normal vacuolar transport during vegetative growth","type":"exact"},{"name":"vacuolar transport: normal","type":"related"}],"termid":"FYPO:0000601"}


id: PBO:0031671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_secretion","termid":"PBO:0031671"}


id: GO:0015312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: H+(out) + polyamine(in) = H+(in) + polyamine(out).","definition_xrefs":["TC:2.A.1.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"},{"relation_name":"is_a","term_name":"polyamine transmembrane transporter activity","termid":"GO:0015203"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"polyamine:proton antiporter activity","synonyms":[{"name":"polyamine:hydrogen antiporter activity","type":"exact"}],"termid":"GO:0015312"}


id: FYPO:0003423
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mitochondrial RNA measured in a cell is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during vegetative growth","termid":"FYPO:0001117"},{"relation_name":"is_a","term_name":"altered RNA level in mitochondrion","termid":"FYPO:0004958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased mitochondrial RNA level","synonyms":[{"name":"decreased RNA level in mitochondrion","type":"exact"},{"name":"decreased mitochondrial RNA accumulation","type":"related"},{"name":"decreased mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"decreased mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"decreased mitochondrial transcript level","type":"exact"},{"name":"reduced mitochondrial RNA level","type":"exact"}],"termid":"FYPO:0003423"}


id: MONDO:0023124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial pulmonary arterial hypertension leucopenia and atrial septal defect","synonyms":[{"name":"familial PAH, leucopenia and ASD","type":"related"},{"name":"familial pulmonary arterial hypertension, leucopenia and ASD","type":"related"}],"termid":"MONDO:0023124","xrefs":{"Monarch":{"xref_id":"0023124"}}}


id: GO:0050358
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pseudotropine = H+ + NADPH + tropinone.","definition_xrefs":["EC:1.1.1.236","RHEA:24244"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tropinone reductase activity","secondary_identifiers":["MetaCyc:TROPINONE-REDUCTASE-RXN","KEGG_REACTION:R06734"],"synonyms":[{"name":"pseudotropine forming tropinone reductase activity","type":"related"},{"name":"pseudotropine:NADP+ 3-oxidoreductase activity","type":"related"},{"name":"tropinone (psi-tropine-forming) reductase activity","type":"related"},{"name":"tropinone reductase II activity","type":"related"}],"termid":"GO:0050358"}


id: SO:0000130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that is regulated after it has been translated.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulated","termid":"SO:0000119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post_translationally_regulated","synonyms":[{"name":"post translationally regulated","type":"exact"},{"name":"post-translationally regulated","type":"exact"}],"termid":"SO:0000130"}


id: PBO:0048939
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin, RAB6 interacting","termid":"PBO:0048939"}


id: PBO:0117436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mpv17/PMP22 family protein Sym1, implicated in transmembrane trasnsport or organelle fission","termid":"PBO:0117436"}


