# terms

id: GO:0047120
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate + NAD+ = 3,4-dihydroxybenzoate + CO2 + NADH.","definition_xrefs":["EC:1.3.1.53","RHEA:10744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.53-RXN","UM-BBD_reactionID:r0151","GO:0018514","KEGG_REACTION:R01633"],"synonyms":[{"name":"(1R,2S)-dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylate dehydrogenase activity","type":"related"},{"name":"(3S,4R)-3,4-dihydroxycyclohexa-1,5-diene-1,4-dicarboxylate:NAD+ oxidoreductase activity","type":"related"},{"name":"cis-4,5-dihydroxycyclohexa-1(6),2-diene-1,4-dicarboxylate:NAD+ oxidoreductase (decarboxylating)","type":"related"},{"name":"dihydroxy-3,5-cyclohexadiene-1,4-dicarboxylate dehydrogenase activity","type":"related"},{"name":"terephthalate 1,2-cis-dihydrodiol dehydrogenase activity","type":"exact"}],"termid":"GO:0047120"}


id: GO:0102963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H+ + (S)-reticulinium(1+) + NADPH + O2 = (S)-corytuberine + NADP + 2 H2O.","definition_xrefs":["PMID:18230623","RHEA:51540"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(S)-corytuberine synthase activity","secondary_identifiers":["EC:1.14.19.51","MetaCyc:RXN-9314"],"termid":"GO:0102963"}


id: FYPO:0001379
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of tacrolimus than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002682"],"is_obsolete":false,"name":"resistance to tacrolimus","synonyms":[{"name":"resistance to FK506","type":"exact"},{"name":"resistance to tacrolimus during mitotic cell cycle","type":"related"},{"name":"resistance to tacrolimus during vegetative growth","type":"exact"},{"name":"resistant to tacrolimus","type":"exact"}],"termid":"FYPO:0001379"}


id: PBO:0066081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 9","termid":"PBO:0066081"}


id: GO:1902416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mRNA binding.","definition_xrefs":["GOC:TermGenie","GOC:rb","PMID:22890846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA binding","termid":"GO:1902415"},{"relation_name":"is_a","term_name":"positive regulation of RNA binding","termid":"GO:1905216"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mRNA binding","synonyms":[{"name":"activation of mRNA binding","type":"narrow"},{"name":"up regulation of mRNA binding","type":"exact"},{"name":"up-regulation of mRNA binding","type":"exact"},{"name":"upregulation of mRNA binding","type":"exact"}],"termid":"GO:1902416"}


id: PBO:0067910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 212","termid":"PBO:0067910"}


id: PBO:0004522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2' O-ribose methyltransferase Mrm2 (predicted)","termid":"PBO:0004522"}


id: GO:0075272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of zygosporangium development, a process in which a fruiting body called zygosporangium is formed.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of spore-bearing organ development","termid":"GO:0075260"},{"relation_name":"regulates","term_name":"zygosporangium development","termid":"GO:0075271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of zygosporangium development","termid":"GO:0075272"}


id: PBO:0072621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radial spoke head 6 homolog A","termid":"PBO:0072621"}


id: PBO:0061146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 9","termid":"PBO:0061146"}


id: GO:0003855
data:
  {"annotated_genes":["SJAG_00337"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[60649],"is_not":false,"summary":null,"term":"GO:0003855"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-dehydroquinate = 3-dehydroshikimate + H2O.","definition_xrefs":["RHEA:21096","EC:4.2.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00337":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"3-dehydroquinate dehydratase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:3-DEHYDROQUINATE-DEHYDRATASE-RXN","KEGG_REACTION:R03084"],"synonyms":[{"name":"3-dehydroquinase activity","type":"related"},{"name":"3-dehydroquinate hydro-lyase (3-dehydroshikimate-forming)","type":"related"},{"name":"3-dehydroquinate hydro-lyase activity","type":"related"},{"name":"3-dehydroquinate hydrolase activity","type":"related"},{"name":"5-dehydroquinase activity","type":"related"},{"name":"5-dehydroquinate dehydratase activity","type":"related"},{"name":"5-dehydroquinate hydro-lyase activity","type":"related"},{"name":"DHQase","type":"related"},{"name":"dehydroquinase activity","type":"related"},{"name":"dehydroquinate dehydratase activity","type":"related"}],"termid":"GO:0003855","terms_by_termid":{"GO:0003855":null}}


id: PBO:0072072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 2","termid":"PBO:0072072"}


id: PBO:0045569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 18","termid":"PBO:0045569"}


id: GO:0036500
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the endoplasmic reticulum membrane stress sensor ATF6 (activating transcription factor 6). Begins with activation of ATF6 in response to endoplasmic reticulum (ER) stress, and ends with regulation of a downstream cellular process, e.g. transcription. Under conditions of endoplasmic reticulum stress, ATF6 translocates to the Golgi where it is processed by proteases to release a cytoplasmic domain (ATF6f), which operates as a transcriptional activator of many genes required to restore folding capacity.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:22013210"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ER-nucleus signaling pathway","termid":"GO:0006984"},{"relation_name":"is_a","term_name":"endoplasmic reticulum unfolded protein response","termid":"GO:0030968"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ATF6-mediated unfolded protein response","secondary_identifiers":["Reactome:R-HSA-381033"],"synonyms":[{"name":"ATF6 branch of UPR","type":"exact"},{"name":"ATF6 signal transduction pathway","type":"broad"},{"name":"ATF6 signaling in response to endoplasmic reticulum stress","type":"related"},{"name":"ATF6-alpha UPR branch","type":"narrow"},{"name":"ATF6-beta UPR branch","type":"narrow"},{"name":"UPR signaling by ATF6 stress sensor","type":"exact"},{"name":"activating transcription factor 6 signaling in unfolded protein response","type":"exact"},{"name":"endoplasmic reticulum unfolded protein response; ATF6 signaling","type":"exact"}],"termid":"GO:0036500"}


id: PBO:0004067
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.6.1.16","termid":"PBO:0004067"}


id: PATO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of its lacking most of the cellular characteristics which would allow it to be fully differentiated.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"differentiated","termid":"PATO:0002099"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poorly differentiated","termid":"PATO:0002106"}


id: MONDO:0012056
data:
  {"annotated_genes":["SJAG_02889"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87604],"is_not":false,"summary":null,"term":"MONDO:0012056"}]},"cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the NMNAT1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"NMNAT1-related retinopathy","termid":"MONDO:0800101"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02889":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005328"],"is_obsolete":false,"name":"Leber congenital amaurosis 9","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:9491","MESH:C536603","UMLS:C1837873","MEDGEN:325277","DOID:0110005","ICD10CM:H35.5","OMIM:608553"],"synonyms":[{"name":"LCA9","type":"exact"},{"name":"Leber congenital amaurosis 9","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in NMNAT1","type":"exact"},{"name":"Leber congenital amaurosis type 9","type":"exact"},{"name":"NMNAT1 Leber congenital amaurosis","type":"exact"},{"name":"amaurosis congenita of Leber, type 9","type":"related"}],"termid":"MONDO:0012056","terms_by_termid":{"MONDO:0012056":null},"xrefs":{"Monarch":{"xref_id":"0012056"}}}


id: GO:1902385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycyrrhetinate.","definition_xrefs":["GOC:TermGenie","PMID:22128119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentacyclic triterpenoid catabolic process","termid":"GO:0019741"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"glycyrrhetinate metabolic process","termid":"GO:1902384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"glycyrrhetinate catabolic process","synonyms":[{"name":"glycyrrhetinate breakdown","type":"exact"},{"name":"glycyrrhetinate catabolism","type":"exact"},{"name":"glycyrrhetinate degradation","type":"exact"}],"termid":"GO:1902385"}


id: PBO:0082358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Autophagy receptor with a role in degradation of the ER and nucleus; involved specifically in autophagy of perinuclear endoplasmic reticulum in response to nitrogen starvation or rapamycin treatment; localizes to the perinuclear ER","termid":"PBO:0082358"}


id: PBO:0075082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 132","termid":"PBO:0075082"}


id: PR:Q9P4X2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- omh6 gene.","definition_xrefs":["UniProtKB:Q9P4X2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-glycoside alpha-1,2-mannosyltransferase homolog 6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC959.04c","synonyms":[{"name":"Spom972h-omh6","type":"exact"}],"termid":"PR:Q9P4X2"}


id: PBO:0049199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate ionotropic receptor kainate type subunit 1","termid":"PBO:0049199"}


id: PBO:0075500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 48","termid":"PBO:0075500"}


id: PBO:0084022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glycosylphosphatidylinositol (GPI)-anchored cell wall endoglucanase; localizes in birth scars; required for proper cell separation after cytokinesis; expression is activated by Swi5p and tightly regulated in a cell cycle-dependent manner","termid":"PBO:0084022"}


id: PR:P79060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein translation factor sui1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC23G7.05","secondary_identifiers":["UniProtKB:P79060"],"synonyms":[{"name":"Spom972h-EIF1","type":"exact"}],"termid":"PR:P79060"}


id: PBO:0013132
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPHerical shape","termid":"PBO:0013132"}


id: PBO:0053552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 559","termid":"PBO:0053552"}


id: GO:1900032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trichome patterning.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"regulation of signaling","termid":"GO:0023051"},{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"trichome patterning","termid":"GO:0048629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"regulation of trichome patterning","synonyms":[{"name":"regulation of trichome distribution","type":"broad"},{"name":"regulation of trichome pattern biosynthesis","type":"exact"},{"name":"regulation of trichome pattern formation","type":"exact"},{"name":"regulation of trichome pattern specification","type":"related"},{"name":"regulation of trichome spacing","type":"exact"}],"termid":"GO:1900032"}


id: PBO:0057446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 564","termid":"PBO:0057446"}


id: FYPO:0005078
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to a combination of canavanine and rapamycin. Cells stop growing (and may die) at concentrations of canavanine and rapamycin that allows wild type cells to grow.","definition_xrefs":["PMID:17179073","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to canavanine and rapamycin","synonyms":[{"name":"hypersensitive to canavanine and rapamycin","type":"exact"},{"name":"sensitive to canavanine and rapamycin during mitotic cell cycle","type":"related"},{"name":"sensitive to canavanine and rapamycin during vegetative growth","type":"exact"},{"name":"sensitive to canavanine and rapamycin in combination","type":"exact"}],"termid":"FYPO:0005078"}


id: PBO:0111738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 19 member 4, pseudogene","termid":"PBO:0111738"}


id: GO:1902168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catechin stimulus.","definition_xrefs":["GOC:rjd","PMID:23516620","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to phenylpropanoid","termid":"GO:0080184"},{"relation_name":"is_a","term_name":"response to flavonoid","termid":"GO:1905395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to catechin","termid":"GO:1902168"}


id: PBO:0059003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metabolism of cobalamin associated D","termid":"PBO:0059003"}


id: PBO:0120454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCS1 ubiquinol-cytochrome c reductase complex chaperone","termid":"PBO:0120454"}


id: PATO:0000803
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000803 tactile response value (obsolete PATO:0000803)","termid":"PATO:0000803"}


id: PR:O13902
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dak1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13902"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.11","synonyms":[{"name":"DHA kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dak1","type":"exact"},{"name":"glycerone kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"triokinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"triose kinase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13902"}


id: PBO:0080033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 19","termid":"PBO:0080033"}


id: GO:0033751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: linoleate + O2 = (9Z,12Z)-(7S,8S)-dihydroxyoctadeca-9,12-dienoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete linoleate 8R-lipoxygenase (obsolete GO:0033751)","synonyms":[{"name":"5,8-linoleate diol synthase (bifunctional enzyme)","type":"related"},{"name":"7,8-linoleate diol synthase (bifunctional enzyme)","type":"related"},{"name":"linoleate diol synthase activity","type":"related"}],"termid":"GO:0033751"}


id: PBO:0090479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTB/POZ family ubiquitin-type ligase substrate adaptor Btb1","termid":"PBO:0090479"}


id: PBO:0086943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras-type GTPase; required for bud site selection during both axial and bipolar budding, for morphological changes in response to mating pheromone, and for efficient cell fusion; recruits Cdc24p to the incipient bud site, activating its guanyl-nucleotide exchange factor activity and the Rho-like GTPase, Cdc42p; localizes to the plasma membrane, the incipient bud site, polarized growth sites, the cell division site and the vacuole membrane; Ras superfamily member similar to mammalian Rap GTPases","termid":"PBO:0086943"}


id: MONDO:1012311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor neuron disease, non-human animal","termid":"MONDO:1011868"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motor neuron disease, dog","secondary_identifiers":["OMIA:001165-9615"],"termid":"MONDO:1012311","xrefs":{"Monarch":{"xref_id":"1012311"}}}


id: GO:0007107
data:
  {"annotated_genes":["SJAG_04358","SJAG_03915"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101779,93303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061796"}]},"cv_name":"biological_process","definition":"Any process involved in the net addition of membrane at the site of cytokinesis; includes vesicle recruitment and fusion, local lipid synthesis and insertion.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokinetic process","termid":"GO:0032506"},{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03915":null,"SJAG_04358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"membrane addition at site of cytokinesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cytokinesis, membrane recruitment/generation","type":"exact"}],"termid":"GO:0007107","terms_by_termid":{"GO:0061796":null}}


id: FYPO:0008188
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in the centromere central core is abolished.","direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0008368"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0000002","FYPO:0005447","FYPO:0002494","FYPO:0001320"],"is_obsolete":false,"name":"abolished histone H3-K9 trimethylation at centromere central core during vegetative growth","termid":"FYPO:0008188"}


id: FYPO:0003511
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of L-ergothioneine measured in a cell is too low to detect.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell","termid":"FYPO:0001888"},{"relation_name":"is_a","term_name":"decreased cellular L-ergothioneine level","termid":"FYPO:0003521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"L-ergothioneine absent from cell","termid":"FYPO:0003511"}


id: _global:variant_of
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A' is a variant (mutation) of A = definition every instance of A' is either an immediate mutation of some instance of A, or there is a chain of immediate mutation processes linking A' to some instance of A.","definition_xrefs":["SO:immuno_workshop"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant_of","termid":"_global:variant_of"}


id: PBO:0117420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 15","termid":"PBO:0117420"}


id: PBO:0075813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSBP3 pseudogene 2","termid":"PBO:0075813"}


id: PBO:0083616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein light intermediate chain (LIC); localizes with dynein, null mutant is defective in nuclear migration","termid":"PBO:0083616"}


id: GO:0002829
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of a type 2 immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type 2 immune response","termid":"GO:0002828"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"type 2 immune response","termid":"GO:0042092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type 2 immune response","synonyms":[{"name":"down regulation of type 2 immune response","type":"exact"},{"name":"down-regulation of type 2 immune response","type":"exact"},{"name":"downregulation of type 2 immune response","type":"exact"},{"name":"inhibition of type 2 immune response","type":"narrow"},{"name":"negative regulation of T-helper 2 type immune response","type":"narrow"},{"name":"negative regulation of Th2 immune response","type":"narrow"}],"termid":"GO:0002829"}


id: PBO:0001260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb family","termid":"PBO:0001260"}


id: PBO:0083806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential protein that forms a dimer with Ntr2p; also forms a trimer, with Ntr2p and Prp43p, that is involved in spliceosome disassembly; found also in a multisubunit complex with the splicing factor Clf1p; suppressor of prp38-1 mutation","termid":"PBO:0083806"}


id: PBO:0046995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 88 member F","termid":"PBO:0046995"}


id: GO:0015742
data:
  {"annotated_genes":["SJAG_00275","SJAG_00522"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73629],"is_not":false,"summary":null,"term":"GO:0015742"},{"annotations":[98574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990550"}]},"cv_name":"biological_process","definition":"The directed movement of alpha-ketoglutarate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid transport","termid":"GO:0006835"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_00522":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"alpha-ketoglutarate transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"2-oxoglutarate transport","type":"exact"},{"name":"mitochondrial alpha-ketoglutarate/malate transport","type":"related"}],"termid":"GO:0015742","terms_by_termid":{"GO:0015742":null,"GO:1990550":null}}


id: PBO:0049847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEAT repeat containing 9","termid":"PBO:0049847"}


id: GO:0008944
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of oligopeptides, with broad specificity. Gly or Ala commonly occur as P1 or P1' residues, but more distant residues are also important, as is shown by the fact that Z-Gly-Pro-Gly-Gly-Pro-Ala is cleaved at the Gly-Gly bond, but not Z-(Gly)5.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete oligopeptidase A activity (obsolete GO:0008944)","synonyms":[{"name":"68000-M signalpeptide hydrolase activity","type":"related"},{"name":"oligopeptidase A activity","type":"exact"}],"termid":"GO:0008944"}


id: GO:0001115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA-RNA complex.","definition_xrefs":["GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA-RNA complex organization","synonyms":[{"name":"protein-DNA-RNA complex subunit organisation","type":"exact"}],"termid":"GO:0001115"}


id: MONDO:0013014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spondyloepimetaphyseal dysplasia characterized by severe short stature, facial dysmorphism and characteristic radiographic findings.","definition_xrefs":["Orphanet:171866"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"spondyloepimetaphyseal dysplasia","termid":"MONDO:0100510"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepimetaphyseal dysplasia, aggrecan type","secondary_identifiers":["OMIM:612813","icd11.foundation:1133152894","UMLS:C2748544","MESH:C567558","SCTID:719165004","GARD:10513","MEDGEN:411237"],"synonyms":[{"name":"SEMD, aggrecan type","type":"exact"},{"name":"SEMDAG","type":"related"},{"name":"spondyloepimetaphyseal dysplasia, aggrecan type","type":"exact"}],"termid":"MONDO:0013014","xrefs":{"Monarch":{"xref_id":"0013014"}}}


id: PBO:0004036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E/phosphatidylinositol(3)-phosphate binding protein (predicted)","termid":"PBO:0004036"}


id: FYPO:0006493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of chitin synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal chitin synthase activity","termid":"FYPO:0006491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000654","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased chitin synthase activity","termid":"FYPO:0006493"}


id: PBO:0005457
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses genes involved in transport","termid":"PBO:0005457"}


id: PBO:0086827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YOL131W has a paralog, STB1, that arose from the whole genome duplication","termid":"PBO:0086827"}


id: FYPO:0007682
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which assembly, exploratory movement, or disassembly of the Cdc42-containing cortical polarity patch is abnormal during mating.","definition_xrefs":["PomBase:mah","PMID:30279276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mating","termid":"FYPO:0000031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"abnormal cortical polarity patch dynamics during mating","synonyms":[{"name":"abnormal cortical polarity patch dynamics during conjugation with cellular fusion","type":"exact"},{"name":"altered cortical polarity patch dynamics during mating","type":"exact"}],"termid":"FYPO:0007682"}


id: GO:0061113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis of the pancreas. Morphogenesis is the process in which anatomical structures are generated and organized.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"pancreas development","termid":"GO:0031016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreas morphogenesis","termid":"GO:0061113"}


id: PBO:0003685
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Up regulated During Septation","termid":"PBO:0003685"}


id: GO:1901440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving poly(hydroxyalkanoate).","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(hydroxyalkanoate) metabolic process","synonyms":[{"name":"poly(hydroxyalkanoate) metabolism","type":"exact"}],"termid":"GO:1901440"}


id: PBO:0068187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 494","termid":"PBO:0068187"}


id: FYPO:0002635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the ubiquitination of one or more specific proteins, or of specific protein sites, is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification during vegetative growth","termid":"FYPO:0000549"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal protein ubiquitination during vegetative growth","synonyms":[{"name":"normal protein ubiquitination during mitotic cell cycle","type":"related"},{"name":"normal protein ubiquitinylation during vegetative growth","type":"exact"},{"name":"normal protein ubiquitylation during vegetative growth","type":"exact"},{"name":"normal protein/peptide ubiquitination during vegetative growth","type":"exact"}],"termid":"FYPO:0002635"}


id: GO:0097438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in exit from dormancy. Dormancy (sometimes called a dormant state) is a suspension of most physiological activity and growth that can be reactivated.","definition_xrefs":["GOC:PO_curators","PO_REF:00009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"exit from dormancy","synonyms":[{"name":"release from dormancy","type":"exact"}],"termid":"GO:0097438"}


id: MONDO:0004948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"B-cell chronic lymphocytic leukemia (B-CLL) is a type of B-cell non-Hodgkin lymphoma, and the most common form of leukemia in Western countries, affecting elderly adults (mean age of 67 and 72 years) with a slight male predominance (1.7:1), and characterized by a highly variable clinical presentation that can include asymptomatic disease or non-specific B-symptoms such as unintentional weight loss, severe fatigue, fever (without evidence of infection), and night sweats as well as cervical lymphadenopathy, splenomegaly and frequent infections. Some patients can also develop autoimmune complications such as autoimmune hemolytic anemia or immune thrombocytopenia. The clinical course is extremely heterogeneous with survival ranging from a few months to several decades.","definition_xrefs":["Orphanet:67038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic leukemia","termid":"MONDO:0001014"},{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"},{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-cell chronic lymphocytic leukemia","secondary_identifiers":["ICD9:204.1","GARD:6104","MESH:D015451","MEDGEN:44120","NORD:971","EFO:0000095","NCIT:C3163","MedDRA:10008958","DOID:1040","OMIM:151400","UMLS:C0023434","ICD10CM:C91.1"],"synonyms":[{"name":"B cell CLL","type":"exact"},{"name":"B cell chronic lymphocytic leukaemia","type":"exact"},{"name":"B cell chronic lymphocytic leukemia","type":"exact"},{"name":"B cell lymphocytic leukaemia","type":"exact"},{"name":"B cell lymphocytic leukemia","type":"exact"},{"name":"B-CLL","type":"exact"},{"name":"B-cell CLL","type":"exact"},{"name":"B-cell chronic lymphocytic leukemia","type":"exact"},{"name":"B-cell chronic lymphogenous leukaemia","type":"exact"},{"name":"B-cell chronic lymphogenous leukemia","type":"exact"},{"name":"B-cell chronic lymphoid leukaemia","type":"exact"},{"name":"B-cell chronic lymphoid leukemia","type":"exact"},{"name":"B-cell lymphocytic leukaemia","type":"exact"},{"name":"B-cell lymphocytic leukemia","type":"exact"},{"name":"BCLL","type":"exact"},{"name":"CLL","type":"exact"},{"name":"Chronic Lymphocytic Leukemia","type":"exact"},{"name":"chronic B-cell lymphocytic leukaemia","type":"exact"},{"name":"chronic B-cell lymphocytic leukemia","type":"exact"},{"name":"chronic lymphatic leukaemia","type":"exact"},{"name":"chronic lymphatic leukemia","type":"exact"},{"name":"chronic lymphocytic leukaemia","type":"exact"},{"name":"chronic lymphocytic leukaemia (CLL)","type":"exact"},{"name":"chronic lymphocytic leukemia","type":"exact"},{"name":"chronic lymphocytic leukemia (CLL)","type":"exact"},{"name":"chronic lymphogenous leukaemia","type":"exact"},{"name":"chronic lymphogenous leukemia","type":"exact"},{"name":"hematopoeitic - chronic lymphocytic leukaemia (CLL)","type":"exact"},{"name":"hematopoeitic - chronic lymphocytic leukemia (CLL)","type":"exact"},{"name":"leukemia, chronic LYMPHOCYTIC","type":"related"},{"name":"leukemia, chronic lymphatic","type":"related"},{"name":"leukemia, lymphocytic, chronic","type":"related"},{"name":"lymphoplasmacytic leukaemia","type":"exact"},{"name":"lymphoplasmacytic leukemia","type":"exact"},{"name":"small lymphocytic lymphoma","type":"related"}],"termid":"MONDO:0004948","xrefs":{"Monarch":{"xref_id":"0004948"}}}


id: PBO:0111527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIFK pseudogene 7","termid":"PBO:0111527"}


id: MONDO:0040964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete superimposed infection (obsolete MONDO:0040964)","secondary_identifiers":["SCTID:193198003"],"synonyms":[{"name":"superadded infection","type":"related"},{"name":"superimposed infection","type":"exact"},{"name":"suprainfection","type":"related"}],"termid":"MONDO:0040964","xrefs":{"Monarch":{"xref_id":"0040964"}}}


id: PBO:0046960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 81 member B","termid":"PBO:0046960"}


id: PBO:0054569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1971","termid":"PBO:0054569"}


id: PBO:0090676
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Set3 complex SANT/Myb domain subunit Snt1","termid":"PBO:0090676"}


id: PBO:0053114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipocalin 1 pseudogene 1","termid":"PBO:0053114"}


id: PBO:0075018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-29","termid":"PBO:0075018"}


id: MONDO:0700002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurological disorder in which the cause of the disease is a mutation in the ATP1A3.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","PMID:33762331","PMID:20301295","PMID:31178018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP1A3-associated neurological disorder","synonyms":[{"name":"ATP1A3 neurological disorder","type":"exact"},{"name":"ATP1A3 related neurological disorder","type":"exact"},{"name":"neurological disorder caused by mutation in ATP1A3","type":"exact"}],"termid":"MONDO:0700002","xrefs":{"Monarch":{"xref_id":"0700002"}}}


id: GO:0023018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which signal transmission via a diffusible molecule is initiated by a T cell.","definition_xrefs":["GOC:mtg_signal"],"gene_count":0,"genotype_count":0,"name":"obsolete T cell activation of signal transmission via diffusible molecule (obsolete GO:0023018)","synonyms":[{"name":"T cell activation of signal transmission via diffusible molecule","type":"exact"}],"termid":"GO:0023018"}


id: PBO:0036438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RhoGAP, GTPase activating protein Rga5","termid":"PBO:0036438"}


id: PBO:0044667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DET1 and DDB1 associated 1","termid":"PBO:0044667"}


id: GO:0097345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process by which the mitochondrial outer membrane becomes permeable to the passing of proteins and other molecules from the intermembrane space to the cytosol as part of the apoptotic signaling pathway.","definition_xrefs":["GOC:pg","GOC:BHF","GOC:mtg_apoptosis","PMID:21041309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitochondrial membrane permeability involved in apoptotic process","termid":"GO:1902110"},{"relation_name":"part_of","term_name":"apoptotic signaling pathway","termid":"GO:0097190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007005","GO:0006810","GO:0061024","GO:0008150","GO:0023052"],"is_obsolete":false,"name":"mitochondrial outer membrane permeabilization","synonyms":[{"name":"MOMP","type":"exact"},{"name":"mitochondrial outer membrane permeabilization during apoptotic cell death","type":"broad"},{"name":"mitochondrion outer membrane permeabilization","type":"exact"}],"termid":"GO:0097345"}


id: PBO:0080450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VSIG10L antisense RNA 1","termid":"PBO:0080450"}


id: FYPO:0007613
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased transcription during vegetative growth","termid":"FYPO:0000781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0005447","FYPO:0000294","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased transcription from STREP promoter","synonyms":[{"name":"increased transcription from STREP promoter during mitotic cell cycle","type":"related"},{"name":"increased transcription from STREP promoter during vegetative growth","type":"exact"}],"termid":"FYPO:0007613"}


id: FYPO:0006454
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiosis","termid":"FYPO:0003549"},{"relation_name":"is_a","term_name":"abnormal protein localization to microtubule cytoskeleton","termid":"FYPO:0004090"},{"relation_name":"is_a","term_name":"abnormal protein localization to spindle","termid":"FYPO:0007863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein localization to meiotic spindle","synonyms":[{"name":"abnormal protein localisation to meiotic spindle","type":"exact"},{"name":"abnormal protein localization to spindle during meiosis","type":"exact"}],"termid":"FYPO:0006454"}


id: GO:0047836
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-tryptophan + malonyl-CoA = N(2)-malonyl-D-tryptophan + CoA + H+.","definition_xrefs":["EC:2.3.1.112","RHEA:23320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-malonyltransferase activity","termid":"GO:0050735"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016746","GO:0003824"],"is_obsolete":false,"name":"D-tryptophan N-malonyltransferase activity","secondary_identifiers":["MetaCyc:D-TRYPTOPHAN-N-MALONYLTRANSFERASE-RXN","KEGG_REACTION:R02482"],"synonyms":[{"name":"malonyl-CoA:D-tryptophan N-malonyltransferase activity","type":"related"}],"termid":"GO:0047836"}


id: GO:0102087
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: benzoate + L-glutamate + ATP = H+ + N-benzoyl-L-glutamate + AMP + diphosphoric acid.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete N-benzoyl-L-glutamate synthetase activity (obsolete GO:0102087)","termid":"GO:0102087"}


id: PBO:0045033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DISC1 intronic transcript 1","termid":"PBO:0045033"}


id: PBO:0075924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST13, Hsp70 interacting protein pseudogene 16","termid":"PBO:0075924"}


id: PBO:0041993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 39","termid":"PBO:0041993"}


id: GO:0030990
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonmembrane-bound oligomeric protein complex that participates in bidirectional transport of molecules (cargo) along axonemal microtubules.","definition_xrefs":["GOC:cilia","PMID:22118932","GOC:kmv","PMID:14570576","PMID:23945166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"intraciliary transport particle","synonyms":[{"name":"IFT complex","type":"related"},{"name":"intraflagellar transport complex","type":"exact"},{"name":"intraflagellar transport particle","type":"exact"}],"termid":"GO:0030990"}


id: PBO:0051322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR22-5 (pseudogene)","termid":"PBO:0051322"}


id: GO:0098646
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A hexagonal shaped collagen network formed by collagen type X trimer, mostly found in the cartilage hyaline matrix, which located in the interstitial area.","definition_xrefs":["PMID:21421911","PMID:34948124"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen network","termid":"GO:0098645"},{"relation_name":"part_of","term_name":"interstitial matrix","termid":"GO:0005614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"interstitial hexagonal collagen network","synonyms":[{"name":"collagen hexagonal network","type":"exact"}],"termid":"GO:0098646"}


id: GO:0048352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of creating the structural organization of the paraxial mesoderm. This process pertains to the physical shaping of a rudimentary structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesoderm structural organization","termid":"GO:0048338"},{"relation_name":"part_of","term_name":"paraxial mesoderm morphogenesis","termid":"GO:0048340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesoderm structural organization","synonyms":[{"name":"paraxial mesoderm structural organisation","type":"exact"}],"termid":"GO:0048352"}


id: PBO:0054880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2294","termid":"PBO:0054880"}


id: PBO:0063970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 4","termid":"PBO:0063970"}


id: PBO:0048262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosamine (N-acetyl)-6-sulfatase","termid":"PBO:0048262"}


id: GO:0034674
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha5 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"integrin alpha5-beta1 complex","synonyms":[{"name":"ITGA5-ITGB1 complex","type":"narrow"},{"name":"VLA-5 complex","type":"exact"},{"name":"alpha5-beta1 integrin complex","type":"exact"}],"termid":"GO:0034674"}


id: GO:0044325
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a transmembrane transporter, a protein or protein complex that enables the transfer of a substance, usually a specific substance or a group of related substances, from one side of a membrane to the other.","definition_xrefs":["GOC:BHF","GOC:jl","PMID:33199372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"transmembrane transporter binding","synonyms":[{"name":"ion channel binding","type":"narrow"}],"termid":"GO:0044325"}


id: GO:0006248
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of CMP, cytidine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside monophosphate catabolic process","termid":"GO:0009175"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleotide catabolic process","termid":"GO:0009222"},{"relation_name":"is_a","term_name":"CMP metabolic process","termid":"GO:0046035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"CMP catabolic process","synonyms":[{"name":"CMP breakdown","type":"exact"},{"name":"CMP catabolism","type":"exact"},{"name":"CMP degradation","type":"exact"}],"termid":"GO:0006248"}


id: PBO:0119648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TEAD1 antisense RNA 1","termid":"PBO:0119648"}


id: PBO:0085417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; involved in resistance to azole drugs such as ketoconazole and fluconazole","termid":"PBO:0085417"}


id: MONDO:0007908
data:
  {"annotated_genes":["SJAG_00031"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88672],"is_not":false,"summary":null,"term":"MONDO:0007908"}]},"cv_name":"mondo","definition":"Multiple symmetric lipomatosis (MSL) is a rare subcutaneous tissue disease characterized by growth of symmetric non-encapsulated masses of adipose tissue mostly around the face and neck with variable clinical repercussions (e.g. reduced neck mobility, compression of respiratory structures).","definition_xrefs":["Orphanet:2398"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00031":null},"genotype_count":0,"is_obsolete":false,"name":"multiple symmetric lipomatosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NORD:1392","NCIT:C4392","UMLS:C0023804","MEDGEN:7349","SCTID:238902007","OMIM:151800","DOID:14116","EFO:1000737","GARD:6957"],"synonyms":[{"name":"Launois-Bensaude lipomatosis","type":"exact"},{"name":"Launois-Bensaude syndrome","type":"related"},{"name":"Launois-Bensaude's lipomatosis","type":"exact"},{"name":"MSL","type":"related"},{"name":"Madelung disease","type":"broad"},{"name":"Madelung's Disease","type":"exact"},{"name":"Madelung's disease","type":"related"},{"name":"Madelung's neck","type":"exact"},{"name":"benign symmetrical lipomatosis","type":"related"},{"name":"cephalothoracic lipodystrophy","type":"exact"},{"name":"cervical symmetrical lipomatosis","type":"exact"},{"name":"familial benign cervical lipomatosis","type":"exact"},{"name":"familial symmetric lipomatosis","type":"related"},{"name":"lipodystrophy, cephalothoracic","type":"exact"},{"name":"lipomatosis, familial benign cervical","type":"exact"},{"name":"lipomatosis, multiple symmetric","type":"related"},{"name":"multiple symmetric lipomatosis","type":"exact"},{"name":"multiple symmetrical lipomatosis","type":"exact"}],"termid":"MONDO:0007908","terms_by_termid":{"MONDO:0007908":null},"xrefs":{"Monarch":{"xref_id":"0007908"}}}


id: PBO:0057727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1302-11","termid":"PBO:0057727"}


id: PBO:0043382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clusterin like 1","termid":"PBO:0043382"}


id: GO:1902465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K27 trimethylation.","definition_xrefs":["PMID:19270745","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K27 trimethylation (obsolete GO:1902465)","synonyms":[{"name":"down regulation of histone H3-K27 trimethylation","type":"exact"},{"name":"down-regulation of histone H3-K27 trimethylation","type":"exact"},{"name":"downregulation of histone H3-K27 trimethylation","type":"exact"},{"name":"inhibition of histone H3-K27 trimethylation","type":"narrow"}],"termid":"GO:1902465"}


id: PBO:0047224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 227 member B","termid":"PBO:0047224"}


id: GO:0097566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Set of four basal bodies found in Giardia species (trophozoite stage). It comprises the left lateral basal body pair and the left middle basal body pair (i.e. the anterior, ventral, caudal and posteriolateral basal bodies located to the right of the left nucleus of the trophozoite when viewed dorsally).","definition_xrefs":["ISBN:9780124260207","GOC:giardia","PMID:16607022","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cell projection","termid":"GO:0042995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left tetrad","termid":"GO:0097566"}


id: MONDO:0000016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete coronary heart disease (obsolete MONDO:0000016)","termid":"MONDO:0000016","xrefs":{"Monarch":{"xref_id":"0000016"}}}


id: PBO:0091532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin bimC subfamily","termid":"PBO:0091532"}


id: FYECO:0000387
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which tebuconazole was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ tebuconazole","termid":"FYECO:0000387"}


id: PBO:0080936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YY1 transcription factor pseudogene 2","termid":"PBO:0080936"}


id: PBO:0053416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 354","termid":"PBO:0053416"}


id: PBO:0004901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase Pek1","termid":"PBO:0004901"}


id: MONDO:0024431
data:
  {"annotated_genes":["SJAG_05213","SJAG_03785","SJAG_01344","SJAG_05194","SJAG_03363","SJAG_03011","SJAG_00938"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[88777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[88975,88976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[87852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[87284,87282,87283],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"},{"annotations":[88907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease","termid":"MONDO:0005066"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_01344":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03785":null,"SJAG_05194":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"bilirubin metabolism disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:541273","UMLS:C0268305","SCTID:80006005"],"synonyms":[{"name":"disorder of bilirubin metabolism","type":"exact"}],"termid":"MONDO:0024431","terms_by_termid":{"MONDO:0008822":null,"MONDO:0009380":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0024431"}}}


id: MONDO:0007123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyloblepharon filiforme adnatum-cleft palate syndrome","secondary_identifiers":["MEDGEN:400148","GARD:696","MESH:C536373","SCTID:400952003","Orphanet:1072","OMIM:106250","UMLS:C1862866"],"synonyms":[{"name":"AFA","type":"related"},{"name":"ankyloblepharon filiforme adnatum","type":"exact"},{"name":"ankyloblepharon filiforme adnatum and cleft palate","type":"related"},{"name":"ankyloblepharon filiforme adnatum cleft palate","type":"related"},{"name":"ankyloblepharon filiforme congenitum","type":"related"},{"name":"congenital filiform fusion of the eyelids with cleft palate and/or cleft lip","type":"related"}],"termid":"MONDO:0007123","xrefs":{"Monarch":{"xref_id":"0007123"}}}


id: GO:0016252
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any function that supports transcription of genes by RNA polymerase II, and is not specific to a particular gene or gene set.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete nonspecific RNA polymerase II transcription factor activity (obsolete GO:0016252)","synonyms":[{"name":"nonspecific RNA polymerase II transcription factor activity","type":"exact"}],"termid":"GO:0016252"}


id: PBO:0069247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 502, pseudogene","termid":"PBO:0069247"}


id: PBO:0049071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 88","termid":"PBO:0049071"}


id: MONDO:0008599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trigeminal neuralgia is a nerve disorder that causes a stabbing or electric-shock-like pain in parts of the face. The pain lasts a few seconds to a few minutes, and usually on only one side of the face. It can also cause muscle spasms in the face the same time as the pain. The pain may result from a blood vessel pressing against the trigeminal nerve (the nerve that carries pain, feeling, and other sensations from the brain to the skin of theface), as a complication of multiple sclerosis, or due to compression of the nerve by a tumor or cyst. In some cases, the cause is unknown. Treatment options include medicines, surgery, and complementary approaches.","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"},{"relation_name":"is_a","term_name":"trigeminal nerve disorder","termid":"MONDO:0003543"},{"relation_name":"is_a","term_name":"cranial neuralgia","termid":"MONDO:0016374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"trigeminal neuralgia","secondary_identifiers":["EFO:1001219","ICD10CM:G50.0","MedDRA:10044652","ICD9:350.1","GARD:7805","MESH:D014277","icd11.foundation:1803581281","MEDGEN:21683","NORD:1791","OMIM:190400","SCTID:31681005","Orphanet:221091","UMLS:C0040997","DOID:12098"],"synonyms":[{"name":"Tic douloureux","type":"related"},{"name":"neuralgia of trigeminal nerve","type":"exact"},{"name":"trifacial neuralgia","type":"exact"},{"name":"trifocal neuralgia","type":"exact"},{"name":"trigeminal nerve neuralgia","type":"exact"},{"name":"trigeminal neuralgia","type":"exact"}],"termid":"MONDO:0008599","xrefs":{"Monarch":{"xref_id":"0008599"}}}


id: PBO:0083043
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Deoxycytidine monophosphate (dCMP) deaminase; involved in dUMP and dTMP biosynthesis; expression is NOT cell cycle regulated","termid":"PBO:0083043"}


id: MONDO:0019284
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88446],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007900"}]},"cv_name":"mondo","definition":"A nail anomaly that is not part of a larger syndrome.","definition_xrefs":["MONDO:patterns/isolated"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nail disorder","termid":"MONDO:0002884"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"is_obsolete":false,"name":"inherited isolated nail anomaly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:19000","DOID:0080683","MEDGEN:1843192","Orphanet:79369","OMIMPS:161050","UMLS:C5681477"],"synonyms":[{"name":"isolated nail anomaly","type":"related"},{"name":"nail disorder, nonsyndromic congenital","type":"exact"},{"name":"nonsyndromic nail anomaly","type":"exact"}],"termid":"MONDO:0019284","terms_by_termid":{"MONDO:0007900":null},"xrefs":{"Monarch":{"xref_id":"0019284"}}}


id: PBO:0040110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASAP1 intronic transcript 1","termid":"PBO:0040110"}


id: PBO:0082181
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGC kinase; phosphorylated by cAMP-dependent protein kinase (PKA) in a TORC1-dependent manner; directly phosphorylated by TORC1; phosphorylates ribosomal protein Rps6a/b (S6), in a TORC-dependent manner; undergoes autophosphorylation","termid":"PBO:0082181"}


id: GO:0102776
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: pelargonidin 3-O-beta-D-glucoside + UDP-alpha-D-glucose = anthocyanidin 3,5-di-O-beta-D-glucoside + UDP + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-D-glucose:pelargonidin-3-O-beta-D-glucoside 5-O-glucosyltransferase activity (obsolete GO:0102776)","termid":"GO:0102776"}


id: PBO:0048173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G3BP stress granule assembly factor 2","termid":"PBO:0048173"}


id: PBO:0036348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane transporter Mfs1","termid":"PBO:0036348"}


id: MONDO:0003125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant tumor that arises from the testis. It is composed of granulosa cells, Leydig cells, Sertoli cells, and fibroblasts. Each of these cell types may constitute the only cellular component that is present in the tumor or it may be mixed with other cell types in various combinations. The prognosis can not always be predicted on histologic grounds alone. Approximately, ten percent of these tumors may metastasize. Representative examples include granulosa cell tumor, Leydig cell tumor, Sertoli cell tumor, and tumors of the thecoma-fibroma group.","definition_xrefs":["NCIT:C6358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sex cord-stromal tumor","termid":"MONDO:0006055"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular sex cord-stromal neoplasm","secondary_identifiers":["DOID:4757","GARD:21551","MEDGEN:825921","SCTID:702406000","UMLS:C3840076","Orphanet:363489"],"synonyms":[{"name":"sex cord-stromal neoplasm","type":"related"},{"name":"sex cord-stromal neoplasm of testis","type":"related"},{"name":"sex cord-stromal neoplasm of the testis","type":"related"},{"name":"sex cord-stromal tumor of testis","type":"exact"},{"name":"sex cord-stromal tumor of the testis","type":"related"},{"name":"sex cord-stromal tumour of testis","type":"exact"},{"name":"sex cord-stromal tumour of the testis","type":"related"},{"name":"testicular sex cord-stromal neoplasm","type":"exact"},{"name":"testicular sex cord-stromal tumor","type":"exact"},{"name":"testicular sex cord-stromal tumour","type":"exact"},{"name":"testis sex cord-stromal tumor","type":"exact"},{"name":"testis sex cord-stromal tumour","type":"exact"}],"termid":"MONDO:0003125","xrefs":{"Monarch":{"xref_id":"0003125"}}}


id: PBO:0011091
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catabolism of ARginine, after cerevisiae","termid":"PBO:0011091"}


id: PBO:0079089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Tyr (anticodon GTA) 5-2","termid":"PBO:0079089"}


id: GO:0000703
data:
  {"annotated_genes":["SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98160],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034042"},{"annotations":[98161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034043"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal oxidized pyrimidine bases by cleaving the N-C1' glycosidic bond between the oxidized pyrimidine and the deoxyribose sugar. The reaction involves formation of a covalent enzyme-pyrimidine base intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apyrimidinic (AP) site.","definition_xrefs":["GOC:elh","PMID:11554296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016787","GO:0003674","GO:0016798"],"is_obsolete":false,"name":"oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-110227","Reactome:R-HSA-110224","GO:0019004","Reactome:R-HSA-110226"],"synonyms":[{"name":"DNA glycosylase/AP-lyase","type":"broad"},{"name":"DNA glycosylase/beta-lyase","type":"broad"},{"name":"bifunctional DNA glycosylase","type":"broad"},{"name":"endodeoxyribonuclease III","type":"related"},{"name":"endonuclease III","type":"related"},{"name":"endonuclease VIII activity","type":"related"},{"name":"oxidized pyrimidine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"pyrimidine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0000703","terms_by_termid":{"GO:0034042":null,"GO:0034043":null}}


id: FYPO:0004174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur in cells of the h+ mating type.","definition_xrefs":["PomBase:mah","PMID:9003326"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"FYPO:0000280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000301","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"h+ specific sterility","synonyms":[{"name":"h+-specific sterility","type":"exact"},{"name":"h-plus-specific mating defect","type":"related"},{"name":"h-plus-specific sterility","type":"exact"}],"termid":"FYPO:0004174"}


id: PBO:0077542
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 254","termid":"PBO:0077542"}


id: PBO:0090250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set5","termid":"PBO:0090250"}


id: PBO:0081035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCCH-type containing 12C","termid":"PBO:0081035"}


id: PR:O94620
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U5 small nuclear ribonucleoprotein 40 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.11","secondary_identifiers":["UniProtKB:O94620"],"synonyms":[{"name":"Spom972h-SNRNP40","type":"exact"},{"name":"complexed with cdc5 protein 17 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94620"}


id: GO:0090017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of anterior end of the flat, thickened layer of ectodermal cells known as the neural plate.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"neural plate formation","termid":"GO:0021990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior neural plate formation","secondary_identifiers":["Reactome:R-HSA-9823739"],"termid":"GO:0090017"}


id: PBO:0056741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meteorin, glial cell differentiation regulator","termid":"PBO:0056741"}


id: PBO:0052861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-4","termid":"PBO:0052861"}


id: GO:0050734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a hydroxycinnamoyl group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"hydroxycinnamoyltransferase activity","termid":"GO:0050734"}


id: PBO:0052565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysine methyltransferase 2C pseudogene 2","termid":"PBO:0052565"}


id: MONDO:0012200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any posterior polymorphous corneal dystrophy in which the cause of the disease is a mutation in the ZEB1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"posterior polymorphous corneal dystrophy","termid":"MONDO:0020364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"posterior polymorphous corneal dystrophy 3","secondary_identifiers":["OMIM:609141","DOID:0110857","MESH:C563788","GARD:18214","MEDGEN:322978","UMLS:C1836724"],"synonyms":[{"name":"PPCD3","type":"exact"},{"name":"Ppcd3","type":"exact"},{"name":"ZEB1 posterior polymorphous corneal dystrophy","type":"exact"},{"name":"corneal dystrophy, POSTERIOR polymorphous, 3","type":"related"},{"name":"corneal dystrophy, posterior polymorphous, type 3","type":"exact"},{"name":"posterior polymorphous corneal dystrophy caused by mutation in ZEB1","type":"exact"},{"name":"posterior polymorphous corneal dystrophy type 3","type":"exact"}],"termid":"MONDO:0012200","xrefs":{"Monarch":{"xref_id":"0012200"}}}


id: MONDO:0010559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"MASA syndrome (Mental retardation, Aphasia, Spastic paraplegia, Adducted thumbs) is a historical term used to describe a phenotype now considered to be part of the X-linked L1 clinical spectrum (L1 syndrome). MASA is characterized by mild to moderate intellectual deficit, delayed development of speech, hypotonia progressing to spasticity or spastic paraplegia, adducted thumbs, and mild to moderate distension of the cerebral ventricles.","definition_xrefs":["Orphanet:2466"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"L1 syndrome","termid":"MONDO:0017140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"MASA syndrome","secondary_identifiers":["SCTID:716996008","GARD:6986","DOID:0060246","icd11.foundation:1973644723","MEDGEN:162894","UMLS:C0795953","OMIM:303350","NCIT:C129930"],"synonyms":[{"name":"CRASH syndrome","type":"related"},{"name":"CRASH syndrome, X-linked recessive","type":"related"},{"name":"Clasped thumb and intellectual disability","type":"related"},{"name":"Clasped thumb and mental retardation","type":"related"},{"name":"Gareis-Mason syndrome","type":"exact"},{"name":"MASA syndrome","type":"exact"},{"name":"X-linked complicated hereditary spastic paraplegia type 1","type":"exact"},{"name":"X-linked corpus callosum agenesis","type":"exact"},{"name":"X-linked spastic paraplegia 1","type":"exact"},{"name":"adducted thumb with intellectual disability","type":"related"},{"name":"adducted thumb with mental retardation","type":"related"},{"name":"hereditary spastic paraplegia 1","type":"exact"},{"name":"intellectual disability aphasia shuffling Gait adducted thumbs (MASA)","type":"related"},{"name":"intellectual disability, aphasia, shuffling Gait, and adducted thumbs","type":"related"},{"name":"intellectual disability-aphasia-shuffling gait-adducted thumbs syndrome","type":"exact"},{"name":"masa syndrome, X-linked recessive","type":"exact"},{"name":"mental retardation aphasia shuffling Gait adducted thumbs (MASA)","type":"related"},{"name":"mental retardation, aphasia, shuffling Gait, and adducted thumbs","type":"related"},{"name":"spastic paraplegia 1","type":"related"},{"name":"spastic paraplegia 1, X-linked","type":"related"},{"name":"spastic paraplegia, X-linked","type":"exact"},{"name":"thumb congenital clasped with intellectual disability","type":"related"},{"name":"thumb congenital clasped with mental retardation","type":"related"},{"name":"thumb, congenital Clasped, with intellectual disability","type":"related"},{"name":"thumb, congenital Clasped, with mental retardation","type":"related"}],"termid":"MONDO:0010559","xrefs":{"Monarch":{"xref_id":"0010559"}}}


id: PBO:0090122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rpd3L complex subunit","termid":"PBO:0090122"}


id: PATO:0001656
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A osmolarity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"osmolarity","termid":"PATO:0001655"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased osmolarity","synonyms":[{"name":"low osmolarity","type":"exact"}],"termid":"PATO:0001656"}


id: GO:0039628
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=169 symmetry. T=169 icosahedral capsid is composed of 12 pentameric and 1680 hexameric capsomeres for a total of 10140 capsid proteins.","definition_xrefs":["GOC:plm","VZ:10117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=169 icosahedral viral capsid","synonyms":[{"name":"T=169 icosahedral capsid","type":"exact"}],"termid":"GO:0039628"}


id: PBO:0055765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA associated with lymph node metastasis in cervical cancer","termid":"PBO:0055765"}


id: PBO:0014270
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae CAR1","termid":"PBO:0014270"}


id: FYPO:0001793
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell shows increased resistance to conditions that degrade the cell wall.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"resistant to cell wall digestion","synonyms":[{"name":"resistant to cell wall digestion during mitotic cell cycle","type":"related"},{"name":"resistant to cell wall digestion during vegetative growth","type":"exact"}],"termid":"FYPO:0001793"}


id: PBO:0073607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sucrase-isomaltase","termid":"PBO:0073607"}


id: PBO:0075720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorcin pseudogene 1","termid":"PBO:0075720"}


id: GO:0000325
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A closed structure that is completely surrounded by a unit membrane, contains liquid, and retains the same shape regardless of cell cycle phase. An example of this structure is found in Arabidopsis thaliana.","definition_xrefs":["ISBN:0815316208","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole","termid":"GO:0005773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005773"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0005773"],"is_obsolete":false,"name":"plant-type vacuole","synonyms":[{"name":"vacuole, cell cycle-independent morphology","type":"exact"}],"termid":"GO:0000325"}


id: MONDO:0005196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Presence of structurally anomalous spermatozoa in the semen; malformations include the physical bending of the sperm to produce kinks or bends","definition_xrefs":["EFO:0002625"],"gene_count":0,"genotype_count":0,"name":"obsolete teratozoospermia (obsolete MONDO:0005196)","secondary_identifiers":["SCTID:236817003"],"termid":"MONDO:0005196","xrefs":{"Monarch":{"xref_id":"0005196"}}}


id: MONDO:1010448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilated cardiomyopathy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dilated cardiomyopathy, non-human animal","termid":"MONDO:1010011"},{"relation_name":"is_a","term_name":"cardiomyopathy, dog","termid":"MONDO:1010441"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dilated cardiomyopathy, dog","secondary_identifiers":["OMIA:000162-9615"],"termid":"MONDO:1010448","xrefs":{"Monarch":{"xref_id":"1010448"}}}


id: PBO:0090648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD E3 ligase adaptor subunit Hrd3","termid":"PBO:0090648"}


id: PBO:0066973
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 276","termid":"PBO:0066973"}


id: PBO:0064153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKP4 antisense RNA 1","termid":"PBO:0064153"}


id: FYPO:0000488
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which reciprocal meiotic recombination is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic recombination","synonyms":[{"name":"meiotic recombination: normal","type":"related"}],"termid":"FYPO:0000488"}


id: PATO:0001847
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being drawn together, compressed or squeezed physically.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"constricted","secondary_identifiers":["PATO:0001837"],"synonyms":[{"name":"stenosis","type":"exact"},{"name":"stenotic","type":"exact"},{"name":"stricture","type":"exact"}],"termid":"PATO:0001847"}


id: PBO:0049189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylate and hydroxypyruvate reductase","termid":"PBO:0049189"}


id: GO:0030951
data:
  {"annotated_genes":["SJAG_01613","SJAG_02624","SJAG_03540"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[78863,81387,101232],"is_not":false,"summary":null,"term":"GO:0030951"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of polarized microtubule-based cytoskeletal structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule cytoskeleton organization","termid":"GO:0000226"},{"relation_name":"is_a","term_name":"establishment or maintenance of cytoskeleton polarity","termid":"GO:0030952"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01613":null,"SJAG_02624":null,"SJAG_03540":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0000226","GO:0008150","GO:0007163"],"is_obsolete":false,"name":"establishment or maintenance of microtubule cytoskeleton polarity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030951","terms_by_termid":{"GO:0030951":null}}


id: PBO:0047118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 166 member A","termid":"PBO:0047118"}


id: PBO:0085876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching","termid":"PBO:0085876"}


id: PBO:0002120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase (predicted)","termid":"PBO:0002120"}


id: PBO:0001157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxin-6 (predicted)","termid":"PBO:0001157"}


id: MONDO:0009814
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Kaler-Garrity-Stern syndrome is a rare syndrome, described in two sisters of Mennonite descent, characterized by sparse hair, osteopenia, intellectual disability, minor facial abnormalities, joint laxity and hypotonia. There have been no further descriptions in the literature since 1992.","definition_xrefs":["Orphanet:2324"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopenia-intellectual disability-sparse hair syndrome","secondary_identifiers":["GARD:354","OMIM:259690","SCTID:732954002","MESH:C537706","MEDGEN:337979","UMLS:C1850140"],"synonyms":[{"name":"Kaler Garrity Stern syndrome","type":"related"},{"name":"Kaler-Garrity-Stern syndrome","type":"exact"},{"name":"osteopenia and sparse hair","type":"related"},{"name":"osteopenia intellectual disability sparse hair","type":"related"},{"name":"osteopenia mental retardation sparse hair","type":"related"}],"termid":"MONDO:0009814","xrefs":{"Monarch":{"xref_id":"0009814"}}}


id: PBO:0040375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 3","termid":"PBO:0040375"}


id: MONDO:0003792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly aggressive malignant neoplasm arising from the ovary. Morphologically, it is a high grade tumor, composed of carcinomatous and sarcomatous elements.","definition_xrefs":["NCIT:C9192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carcinosarcoma","termid":"MONDO:0002928"},{"relation_name":"is_a","term_name":"ovarian endometrial cancer","termid":"MONDO:0003812"},{"relation_name":"is_a","term_name":"ovarian carcinoma","termid":"MONDO:0005140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovarian carcinosarcoma","secondary_identifiers":["GARD:7296","DOID:6170","MONDO:0016247","UMLS:C0392998","MEDGEN:140705","Orphanet:213512","ONCOTREE:OCS","SCTID:702368000","EFO:1000412"],"synonyms":[{"name":"MMMT of the ovary","type":"exact"},{"name":"carcinosarcoma of ovary","type":"exact"},{"name":"carcinosarcoma of the ovary","type":"exact"},{"name":"malignant mixed Müllerian tumor of the ovary","type":"related"},{"name":"malignant mixed Müllerian tumour of the ovary","type":"related"},{"name":"malignant mixed mesodermal Mullerian neoplasm of ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian neoplasm of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian tumor of ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian tumor of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian tumour of ovary","type":"exact"},{"name":"malignant mixed mesodermal Mullerian tumour of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian neoplasm of ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian neoplasm of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian tumor of ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian tumor of the ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian tumour of ovary","type":"exact"},{"name":"malignant mixed mesodermal Müllerian tumour of the ovary","type":"exact"},{"name":"ovarian MMMT","type":"exact"},{"name":"ovarian carcinosarcoma","type":"exact"},{"name":"ovarian carcinosarcoma/malignant mixed mesodermal tumor","type":"related"},{"name":"ovarian carcinosarcoma/malignant mixed mesodermal tumour","type":"related"},{"name":"ovarian malignant mesodermal (Mullerian) mixed tumor","type":"exact"},{"name":"ovarian malignant mesodermal (Mullerian) mixed tumour","type":"exact"},{"name":"ovarian malignant mesodermal (Müllerian) mixed tumor","type":"exact"},{"name":"ovarian malignant mesodermal (Müllerian) mixed tumour","type":"exact"},{"name":"ovarian malignant mesodermal (mullerian) mixed tumor","type":"exact"},{"name":"ovarian malignant mesodermal (mullerian) mixed tumour","type":"exact"},{"name":"ovarian malignant mixed Mullerian neoplasm","type":"exact"},{"name":"ovarian malignant mixed Mullerian tumor","type":"exact"},{"name":"ovarian malignant mixed Mullerian tumour","type":"exact"},{"name":"ovarian malignant mixed Müllerian neoplasm","type":"exact"},{"name":"ovarian malignant mixed Müllerian tumor","type":"exact"},{"name":"ovarian malignant mixed Müllerian tumour","type":"exact"},{"name":"ovarian malignant mixed epithelial mesenchymal tumor","type":"exact"},{"name":"ovarian malignant mixed epithelial mesenchymal tumour","type":"exact"},{"name":"ovarian malignant mixed mesodermal (Mullerian) tumor","type":"exact"},{"name":"ovarian malignant mixed mesodermal (Mullerian) tumour","type":"exact"},{"name":"ovarian malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"ovarian malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"ovarian malignant mixed mesodermal Mullerian neoplasm","type":"exact"},{"name":"ovarian malignant mixed mesodermal Mullerian tumor","type":"exact"},{"name":"ovarian malignant mixed mesodermal Mullerian tumour","type":"exact"},{"name":"ovarian malignant mixed mesodermal Müllerian neoplasm","type":"exact"},{"name":"ovarian malignant mixed mesodermal Müllerian tumor","type":"exact"},{"name":"ovarian malignant mixed mesodermal Müllerian tumour","type":"exact"},{"name":"ovary carcinosarcoma","type":"exact"}],"termid":"MONDO:0003792","xrefs":{"Monarch":{"xref_id":"0003792"}}}


id: PBO:0090189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial TOM complex subunit Tom40","termid":"PBO:0090189"}


id: PBO:0087179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I second largest subunit A135","termid":"PBO:0087179"}


id: PBO:0111688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyltransferase, CAAX box, subunit alpha","termid":"PBO:0111688"}


id: PBO:0083871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein involved in recycling endocytosed proteins; involved in recycling plasma membrane proteins internalized by endocytosis; localized to sites of polarized growth; direct interaction with C-terminal cytoplasmic region of Drs2p plays an important role for Drs2p function in endocytic recycling pathway; required for turnover of histone H3 variant Cse4p","termid":"PBO:0083871"}


id: MONDO:0017812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare PIK3CA-related overgrowth syndrome disease characterized by segmental and progressive overgrowth, predominantly involving the adipose tissue, or a mixture of adipose and fibrous tissue, with variable involvement of subcutaneous and muscular tissue, as well as skeletal overgrowth. Overgrowth severity and range is highly variable, although frequently it is asymmetric and disproportionate, it affects lower extremities more than the upper ones, and progresses in a distal to proximal patten. Congenital overgrowth is typically associated.","definition_xrefs":["Orphanet:314662"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"overgrowth syndrome","termid":"MONDO:0019716"},{"relation_name":"is_a","term_name":"PIK3CA-related overgrowth spectrum","termid":"MONDO:1040002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"segmental progressive overgrowth syndrome with fibroadipose hyperplasia","secondary_identifiers":["MEDGEN:1673986","UMLS:C5192432","GARD:21384"],"termid":"MONDO:0017812","xrefs":{"Monarch":{"xref_id":"0017812"}}}


id: GO:0046615
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The resumption of the Saccharomyces mitotic cell division cycle by pheromone-arrested cells that have not mated.","definition_xrefs":["GOC:krc","PMID:9927449"],"gene_count":0,"genotype_count":0,"name":"obsolete re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces) (obsolete GO:0046615)","synonyms":[{"name":"re-entry into mitotic cell cycle after pheromone arrest (sensu Saccharomyces)","type":"exact"}],"termid":"GO:0046615"}


id: PBO:0059491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrophage stimulating 1","termid":"PBO:0059491"}


id: FYPO:0002213
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, and the germinated spores have elongated germ tubes that are curved along the long axis. The population may be mixed with respect to other phenotypes (e.g. whether cell division occurs).","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, elongated curved germ tubes (obsolete FYPO:0002213)","synonyms":[{"name":"cell population inviable after spore germination, with elongated, curved germ tubes","type":"exact"},{"name":"inviable germinated spore population, elongated curved germ tubes","type":"exact"}],"termid":"FYPO:0002213"}


id: PBO:0075240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNX10 antisense RNA 1","termid":"PBO:0075240"}


id: PBO:0004187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H Rnh1 (predicted)","termid":"PBO:0004187"}


id: PBO:0071494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L32 pseudogene 35","termid":"PBO:0071494"}


id: GO:0035613
data:
  {"annotated_genes":["SJAG_04880","SJAG_04527"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104195,111981],"is_not":false,"summary":null,"term":"GO:0035613"}]},"cv_name":"molecular_function","definition":"Binding to a stem-loop in an RNA molecule. An RNA stem-loop is a secondary RNA structure consisting of a double-stranded RNA (dsRNA) stem and a terminal loop.","definition_xrefs":["GOC:sart","PMID:16568238","PMID:20455544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04527":null,"SJAG_04880":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0003723","GO:0005488"],"is_obsolete":false,"name":"RNA stem-loop binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"RNA hairpin binding","type":"exact"},{"name":"RNA hairpin loop binding","type":"exact"}],"termid":"GO:0035613","terms_by_termid":{"GO:0035613":null}}


id: PBO:0072004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S7 pseudogene 6","termid":"PBO:0072004"}


id: MONDO:0970994
data:
  {"annotated_genes":["SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88958],"is_not":false,"summary":null,"term":"MONDO:0970994"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-severe combined immunodeficiency due to polymerase delta deficiency","termid":"MONDO:0800145"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 120","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620836","MEDGEN:1862745","UMLS:C5935622","DOID:0061086"],"termid":"MONDO:0970994","terms_by_termid":{"MONDO:0970994":null},"xrefs":{"Monarch":{"xref_id":"0970994"}}}


id: MONDO:0002671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast adenocarcinoma characterized by the presence of malignant epithelial cells with signet ring appearance.","definition_xrefs":["NCIT:C5175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast adenocarcinoma","termid":"MONDO:0004988"},{"relation_name":"is_a","term_name":"signet ring cell carcinoma","termid":"MONDO:0005092"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"signet ring cell breast carcinoma","secondary_identifiers":["DOID:3503","UMLS:C1335964","ONCOTREE:BRSRCC","MEDGEN:236816"],"synonyms":[{"name":"SRC breast carcinoma","type":"exact"},{"name":"SRC carcinoma of breast","type":"exact"},{"name":"SRC carcinoma of the breast","type":"exact"},{"name":"breast carcinoma with signet ring","type":"related"},{"name":"breast signet ring cell adenocarcinoma","type":"related"},{"name":"breast signet ring cell carcinoma","type":"exact"},{"name":"mammary signet Ring cell carcinoma","type":"exact"},{"name":"primary SRC breast carcinoma","type":"exact"},{"name":"primary SRC carcinoma of breast","type":"exact"},{"name":"primary SRC carcinoma of the breast","type":"exact"},{"name":"primary mammary signet Ring cell carcinoma","type":"exact"},{"name":"primary signet Ring cell breast carcinoma","type":"exact"},{"name":"primary signet Ring cell carcinoma of breast","type":"exact"},{"name":"primary signet Ring cell carcinoma of the breast","type":"exact"},{"name":"signet Ring cell breast carcinoma","type":"exact"},{"name":"signet Ring cell carcinoma of breast","type":"exact"},{"name":"signet Ring cell carcinoma of the breast","type":"exact"},{"name":"signet ring cell carcinoma of breast","type":"related"}],"termid":"MONDO:0002671","xrefs":{"Monarch":{"xref_id":"0002671"}}}


id: PBO:0083707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-luminal alpha 1,3 glucosyltransferase; involved in transfer of oligosaccharides from dolichyl pyrophosphate to asparagine residues of proteins during N-linked protein glycosylation; C998T transition in human ortholog ALG6 causes carbohydrate-deficient glycoprotein syndrome type-Ic; wild-type human ortholog ALG6 can partially complement yeast alg6 mutant","termid":"PBO:0083707"}


id: PBO:0086011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; SWAT-GFP and mCherry fusion proteins localize to the endoplasmic reticulum and vacuole respectively; orthologs are present in S. bayanus, S. paradoxus and Ashbya gossypii; YCL012C is not an essential gene","termid":"PBO:0086011"}


id: GO:0003167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cell of the atrioventricular bundle. These cells are specialized cardiomyocytes that transmit signals from the AV node to the cardiac Purkinje fibers.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"His-Purkinje system cell differentiation","termid":"GO:0060932"},{"relation_name":"part_of","term_name":"bundle of His development","termid":"GO:0003166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular bundle cell differentiation","synonyms":[{"name":"AV bundle cell differentiation","type":"exact"}],"termid":"GO:0003167"}


id: MONDO:0009846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pentosuria is an inborn error of metabolism which is characterized by the excretion of 1 to 4 g of the pentose L-xylulose in the urine per day.","definition_xrefs":["Orphanet:2843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pentose phosphate metabolism","termid":"MONDO:0019231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"pentosuria","secondary_identifiers":["MedDRA:10064170","OMIM:260800","SCTID:190764000","DOID:0111258","MESH:C536652","MEDGEN:78646","ICD9:271.8","UMLS:C0268162","GARD:418"],"synonyms":[{"name":"L-Xylulosuria","type":"related"},{"name":"L-xylulose reductase deficiency","type":"related"},{"name":"PNTSU","type":"related"},{"name":"essential pentosuria","type":"exact"},{"name":"pentosuria","type":"exact"},{"name":"xylitol dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0009846","xrefs":{"Monarch":{"xref_id":"0009846"}}}


id: PBO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.5.3.-","termid":"PBO:0001808"}


id: GO:1903864
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a P granule into its constituent components.","definition_xrefs":["GOC:kmv","GO_REF:0000079","GOC:TermGenie","PMID:25535836"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule organization","termid":"GO:0030719"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"P granule disassembly","synonyms":[{"name":"germline granule disassembly","type":"exact"},{"name":"polar granule disassembly","type":"exact"}],"termid":"GO:1903864"}


id: PBO:0043015
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CHKB divergent transcript","termid":"PBO:0043015"}


id: MONDO:0020177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmented palpebral tumor (obsolete MONDO:0020177)","secondary_identifiers":["Orphanet:98586"],"synonyms":[{"name":"pigmented eyelid tumor","type":"exact"},{"name":"pigmented eyelid tumour","type":"exact"},{"name":"pigmented palpebral neoplasm","type":"exact"}],"termid":"MONDO:0020177","xrefs":{"Monarch":{"xref_id":"0020177"}}}


id: MONDO:0700338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammation, panniculitis, and dermatosis syndrome","termid":"MONDO:0975955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoinflammation, panniculitis, and dermatosis syndrome, autosomal dominant","secondary_identifiers":["OMIM:621030"],"termid":"MONDO:0700338","xrefs":{"Monarch":{"xref_id":"0700338"}}}


id: PBO:0029861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029861"}


id: GO:0034671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that results in the spatial identity of regions along the anterior-posterior axis of the pronephros.","definition_xrefs":["GOC:mh"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in pronephros anterior/posterior pattern specification (obsolete GO:0034671)","synonyms":[{"name":"retinoic acid receptor signaling pathway involved in pronephric kidney anterior/posterior pattern specification","type":"exact"},{"name":"retinoic acid receptor signalling pathway involved in pronephros anterior-posterior patterning","type":"exact"}],"termid":"GO:0034671"}


id: GO:0099565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The part of synaptic transmission occurring in the post-synapse: a signal transduction pathway consisting of neurotransmitter receptor activation and its effects on postsynaptic membrane potential and the ionic composition of the postsynaptic cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"},{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"part_of","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"chemical synaptic transmission, postsynaptic","synonyms":[{"name":"postsynaptic process involved in chemical synaptic transmission","type":"exact"}],"termid":"GO:0099565"}


id: PBO:0029827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vacuolated_vegetative_cell,_abnormal_cell_shape,_normal_cell_size","termid":"PBO:0029827"}


id: MONDO:0024558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome in which the cause of the disease is a mutation in the HOXA11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome","termid":"MONDO:0011555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005570"],"is_obsolete":false,"name":"radioulnar synostosis with amegakaryocytic thrombocytopenia 1","secondary_identifiers":["MEDGEN:1637913","GARD:18068","OMIM:605432","UMLS:C4551975"],"synonyms":[{"name":"HOXA11 radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome","type":"exact"},{"name":"RUSAT1","type":"related"},{"name":"Rusat","type":"related"},{"name":"radio-ulnar synostosis-amegakaryocytic thrombocytopenia syndrome caused by mutation in HOXA11","type":"exact"},{"name":"radioulnar synostosis with amegakaryocytic thrombocytopenia 1","type":"exact"},{"name":"thrombocytopenia, congenital, with radioulnar synostosis","type":"related"}],"termid":"MONDO:0024558","xrefs":{"Monarch":{"xref_id":"0024558"}}}


id: PBO:0070303
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 9","termid":"PBO:0070303"}


id: PBO:0053927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1226","termid":"PBO:0053927"}


id: PBO:0005393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone lysine methyltransferase Set9","termid":"PBO:0005393"}


id: GO:0160115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The 3 protofilaments A11, A12, and A13 of the A tubule along with associated inner sheath microtuble inner proteins (MIPs), either in the lumen of the A tubule or of the B tubule, which stabilize these three filiments within the axonemal doublet microtubule. The ribbon protofilaments separate the lumens of the A and B tubules.","definition_xrefs":["GOC:krc","PMID:1262413","PMID:29430673"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal doublet microtubule","termid":"GO:0097545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal microtubule doublet ribbon","termid":"GO:0160115"}


id: GO:0009479
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A cytochrome c that is characteristic of green plants and transfers electrons to plastocyanin.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome f (obsolete GO:0009479)","synonyms":[{"name":"cytochrome f","type":"exact"}],"termid":"GO:0009479"}


id: GO:0061659
data:
  {"annotated_genes":["SJAG_05323","SJAG_03191","SJAG_02685","SJAG_03968","SJAG_02415","SJAG_02668","SJAG_01253","SJAG_01533","SJAG_03302","SJAG_02851","SJAG_02347","SJAG_01165","SJAG_00111","SJAG_03613","SJAG_00209","SJAG_05264","SJAG_03175","SJAG_04600","SJAG_05012","SJAG_03883","SJAG_05274","SJAG_04915","SJAG_00341","SJAG_04619","SJAG_03657","SJAG_01992","SJAG_04429","SJAG_00173","SJAG_03324","SJAG_03970","SJAG_01593","SJAG_01772","SJAG_04783","SJAG_04309","SJAG_03136","SJAG_03618","SJAG_02169","SJAG_02603","SJAG_01507","SJAG_00509","SJAG_02652","SJAG_01854","SJAG_04990","SJAG_03112","SJAG_02308","SJAG_02319","SJAG_03250","SJAG_00727","SJAG_00819","SJAG_02575","SJAG_02299","SJAG_03860","SJAG_00475","SJAG_04151","SJAG_05236","SJAG_03006","SJAG_02371","SJAG_03005","SJAG_00561","SJAG_00435","SJAG_01535","SJAG_00552","SJAG_00500","SJAG_01561","SJAG_06309","SJAG_01776","SJAG_02521","SJAG_00188","SJAG_01900","SJAG_01212","SJAG_01360","SJAG_00208","SJAG_02746","SJAG_03615","SJAG_01637","SJAG_03831","SJAG_04966"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93517,106907,109226,115696],"is_not":false,"summary":null,"term":"GO:0061659"},{"annotations":[112324,74033,111821],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019776"},{"annotations":[120929,118272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[96361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[106377,74451,74470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061665"},{"annotations":[77290,92737,98795,93552,80140,111684,90319,67121,114144,90646,74914,77578,116388,90994,62133,58904,81934,81461,105044,71236,78574,92213,112016,57393,79377,103330,75115,76238,76241,80645,106378,118764,95576,64455,91734,105438,75521,76337,67174,107270,101407,73790,100549,120520,73448,118765,105423,80719,65856,81100,73887,78273,90032,79412,74701,115454,90022,110046,119271,108986,77322,63415,71123,114877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[76746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a ubiquitin-like protein (ULP) to a substrate protein via the reaction X-ULP + S = X + S-ULP, where X is either an E2 or E3 enzyme, the X-ULP linkage is a thioester bond, and the S-ULP linkage is an isopeptide bond between the C-terminal glycine of ULP and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ubiquitin-like protein transferase activity","termid":"GO:0019787"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00111":null,"SJAG_00173":null,"SJAG_00188":null,"SJAG_00208":null,"SJAG_00209":null,"SJAG_00341":null,"SJAG_00435":null,"SJAG_00475":null,"SJAG_00500":null,"SJAG_00509":null,"SJAG_00552":null,"SJAG_00561":null,"SJAG_00727":null,"SJAG_00819":null,"SJAG_01165":null,"SJAG_01212":null,"SJAG_01253":null,"SJAG_01360":null,"SJAG_01507":null,"SJAG_01533":null,"SJAG_01535":null,"SJAG_01561":null,"SJAG_01593":null,"SJAG_01637":null,"SJAG_01772":null,"SJAG_01776":null,"SJAG_01854":null,"SJAG_01900":null,"SJAG_01992":null,"SJAG_02169":null,"SJAG_02299":null,"SJAG_02308":null,"SJAG_02319":null,"SJAG_02347":null,"SJAG_02371":null,"SJAG_02415":null,"SJAG_02521":null,"SJAG_02575":null,"SJAG_02603":null,"SJAG_02652":null,"SJAG_02668":null,"SJAG_02685":null,"SJAG_02746":null,"SJAG_02851":null,"SJAG_03005":null,"SJAG_03006":null,"SJAG_03112":null,"SJAG_03136":null,"SJAG_03175":null,"SJAG_03191":null,"SJAG_03250":null,"SJAG_03302":null,"SJAG_03324":null,"SJAG_03613":null,"SJAG_03615":null,"SJAG_03618":null,"SJAG_03657":null,"SJAG_03831":null,"SJAG_03860":null,"SJAG_03883":null,"SJAG_03968":null,"SJAG_03970":null,"SJAG_04151":null,"SJAG_04309":null,"SJAG_04429":null,"SJAG_04600":null,"SJAG_04619":null,"SJAG_04783":null,"SJAG_04915":null,"SJAG_04966":null,"SJAG_04990":null,"SJAG_05012":null,"SJAG_05236":null,"SJAG_05264":null,"SJAG_05274":null,"SJAG_05323":null,"SJAG_06309":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0019787"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003824","GO:0019787","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"ubiquitin-like protein ligase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"E3","type":"related"},{"name":"small conjugating protein ligase activity","type":"exact"}],"termid":"GO:0061659","terms_by_termid":{"GO:0019776":null,"GO:0034450":null,"GO:0061630":null,"GO:0061659":null,"GO:0061665":null,"GO:0140850":null,"GO:0140851":null}}


id: PBO:0004232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ClC chloride channel (predicted)","termid":"PBO:0004232"}


id: PBO:0004279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-PARP type","termid":"PBO:0004279"}


id: GO:0070109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of an interleukin-27-mediated signaling pathway.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-27-mediated signaling pathway","termid":"GO:0070107"},{"relation_name":"positively_regulates","term_name":"interleukin-27-mediated signaling pathway","termid":"GO:0070106"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-27-mediated signaling pathway","synonyms":[{"name":"positive regulation of IL-27-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL27RA/IL6ST signaling pathway","type":"exact"},{"name":"positive regulation of interleukin-27-mediated signalling pathway","type":"exact"}],"termid":"GO:0070109"}


id: PBO:0063929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoinositide kinase, FYVE-type zinc finger containing","termid":"PBO:0063929"}


id: GO:2000625
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of miRNA catabolic process.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of miRNA metabolic process","termid":"GO:2000628"},{"relation_name":"regulates","term_name":"miRNA catabolic process","termid":"GO:0010587"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of miRNA catabolic process","synonyms":[{"name":"regulation of microRNA catabolic process","type":"exact"}],"termid":"GO:2000625"}


id: GO:2001090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a maltotriuloseacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trisaccharide transport","termid":"GO:2001088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"maltotriulose transport","termid":"GO:2001090"}


id: MONDO:0012434
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arrhythmogenic right ventricular cardiomyopathy in which the cause of the disease is a mutation in the DSG2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"familial isolated arrhythmogenic ventricular dysplasia, left dominant form","termid":"MONDO:0017401"},{"relation_name":"excluded_subClassOf","term_name":"familial isolated arrhythmogenic ventricular dysplasia, biventricular form","termid":"MONDO:0017402"},{"relation_name":"excluded_subClassOf","term_name":"familial isolated arrhythmogenic ventricular dysplasia, right dominant form","termid":"MONDO:0017403"},{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 10","secondary_identifiers":["UMLS:C1857777","DOID:0110081","OMIM:610193","MESH:C565707","MEDGEN:347543"],"synonyms":[{"name":"ARVC10","type":"exact"},{"name":"ARVD10","type":"exact"},{"name":"DSG2 arrhythmogenic right ventricular cardiomyopathy","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 10","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy caused by mutation in DSG2","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia 10","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 10","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 10","type":"related"},{"name":"arrhythmogenic right ventricular dysplasia, familial, type 10","type":"exact"},{"name":"familial arrhythmogenic right ventricular dysplasia 10","type":"exact"}],"termid":"MONDO:0012434","xrefs":{"Monarch":{"xref_id":"0012434"}}}


id: PBO:0050858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoprenylcysteine carboxyl methyltransferase","termid":"PBO:0050858"}


id: MONDO:0006765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with bacteria of the genus fusobacterium.","definition_xrefs":["MESH:D005674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fusobacteriaceae infectious disease","termid":"MONDO:0006925"},{"relation_name":"is_a","term_name":"anaerobic bacteria infectious disease","termid":"MONDO:0024389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fusobacterium infectious disease","secondary_identifiers":["EFO:1000943","ICD9:041.84","SCTID:712657002","MEDGEN:872278","UMLS:C4039413"],"synonyms":[{"name":"Fusobacterium caused disease or disorder","type":"exact"},{"name":"Fusobacterium disease or disorder","type":"exact"},{"name":"infection caused by Fusobacterium","type":"related"},{"name":"infection due to Fusobacterium","type":"exact"}],"termid":"MONDO:0006765","xrefs":{"Monarch":{"xref_id":"0006765"}}}


id: MONDO:0019209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease due to a virus transmitted by an arthropod).","definition_xrefs":["Orphanet:79139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mosquito-borne viral encephalitis","termid":"MONDO:0020601"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Japanese encephalitis","secondary_identifiers":["DOID:10844","GARD:6797","icd11.foundation:961032639","SCTID:52947006","UMLS:C0014057","EFO:0007332","MEDGEN:4032","MESH:D004672","NCIT:C34577","ICD9:062.0","ICD10CM:A83.0","NORD:1088","MedDRA:10014596"],"synonyms":[{"name":"Encephalitis, Japanese","type":"exact"},{"name":"JE","type":"related"},{"name":"Japanese B encephalitis","type":"exact"}],"termid":"MONDO:0019209","xrefs":{"Monarch":{"xref_id":"0019209"}}}


id: MONDO:0006935
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The obstruction of the right ventricular outflow tract that originates within the body of the right ventricle, that exists at the time of birth; it often occurs in association with other intracardiac anomalies.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary valve stenosis","termid":"MONDO:0006936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pulmonary subvalvular stenosis","secondary_identifiers":["ICD9:746.83","MESH:D011662","SCTID:204370002","MEDGEN:11030","NCIT:C34961","NANDO:2100092","DOID:8861","UMLS:C0034084","NANDO:2200276","EFO:1001137","ICD10CM:Q24.3"],"synonyms":[{"name":"congenital infundibular stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis","type":"exact"},{"name":"infundibular pulmonic stenosis, congenital","type":"exact"},{"name":"pulmonary infundibular stenosis","type":"exact"},{"name":"subvalvular pulmonic stenosis","type":"exact"}],"termid":"MONDO:0006935","xrefs":{"Monarch":{"xref_id":"0006935"}}}


id: RO:0002564
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"interaction_relation_helper_property","termid":"RO:0002563"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"molecular_interaction_relation_helper_property","termid":"RO:0002564"}


id: GO:0036062
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A region that surrounds the active zone of the presynaptic plasma membrane, and is specialized for the control of synaptic development.","definition_xrefs":["PMID:10976048","PMID:18439406","GOC:sart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic membrane","termid":"GO:0097060"},{"relation_name":"part_of","term_name":"presynaptic membrane","termid":"GO:0042734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"presynaptic periactive zone","synonyms":[{"name":"periactive zone","type":"exact"},{"name":"pre-synaptic periactive zone","type":"exact"}],"termid":"GO:0036062"}


id: GO:0019752
data:
  {"annotated_genes":["SJAG_01766","SJAG_04362","SJAG_01432","SJAG_01238","SJAG_03614","SJAG_02313","SJAG_04549","SJAG_01880","SJAG_03471","SJAG_01061","SJAG_01466","SJAG_03180","SJAG_02972","SJAG_03293","SJAG_03804","SJAG_01458","SJAG_01592","SJAG_00636","SJAG_02388","SJAG_00947","SJAG_03641","SJAG_01946","SJAG_04145","SJAG_04404","SJAG_03556","SJAG_00461","SJAG_03055","SJAG_00043","SJAG_00224","SJAG_01574","SJAG_00518","SJAG_03373","SJAG_00359","SJAG_04570","SJAG_03659","SJAG_02734","SJAG_03130","SJAG_04913","SJAG_04425","SJAG_04688","SJAG_00706","SJAG_02763","SJAG_01198","SJAG_02832","SJAG_03881","SJAG_04674","SJAG_03313","SJAG_02885","SJAG_01396","SJAG_04042","SJAG_01404","SJAG_02369","SJAG_03124","SJAG_03743","SJAG_04449","SJAG_04098","SJAG_02106","SJAG_03198","SJAG_04972","SJAG_02985","SJAG_06621","SJAG_01461","SJAG_03679","SJAG_04054","SJAG_03266","SJAG_03275","SJAG_03306","SJAG_03312","SJAG_01356","SJAG_00495","SJAG_03985","SJAG_04747","SJAG_00102","SJAG_00432","SJAG_01126","SJAG_00281","SJAG_02791","SJAG_02960","SJAG_03972","SJAG_03526","SJAG_03861","SJAG_03152","SJAG_00099","SJAG_02741","SJAG_00869","SJAG_00106","SJAG_04843","SJAG_04149","SJAG_06622","SJAG_02009","SJAG_01596","SJAG_05314","SJAG_03671","SJAG_02945","SJAG_03660","SJAG_04495","SJAG_02225","SJAG_03243","SJAG_03457","SJAG_03141","SJAG_02158","SJAG_00673","SJAG_03775","SJAG_03310","SJAG_00605","SJAG_01310","SJAG_00866","SJAG_01346","SJAG_03856","SJAG_04305","SJAG_00392","SJAG_00839","SJAG_00815","SJAG_03786","SJAG_04827","SJAG_00988","SJAG_00695","SJAG_00234","SJAG_01019","SJAG_02400","SJAG_02290","SJAG_03167","SJAG_04107","SJAG_03828","SJAG_00902","SJAG_00714","SJAG_06635","SJAG_03485","SJAG_00309","SJAG_01300","SJAG_01139","SJAG_00337","SJAG_00674","SJAG_00305","SJAG_02007","SJAG_03224","SJAG_00964","SJAG_00120","SJAG_00027","SJAG_05007","SJAG_00203","SJAG_02293","SJAG_01903","SJAG_02505","SJAG_01271","SJAG_03553","SJAG_04156","SJAG_00412","SJAG_01455","SJAG_03909","SJAG_00107","SJAG_02107","SJAG_00944","SJAG_04726","SJAG_01402","SJAG_02135","SJAG_02276","SJAG_02450","SJAG_00881","SJAG_04007","SJAG_00248","SJAG_05200","SJAG_03290","SJAG_00660","SJAG_02176","SJAG_01989","SJAG_00635","SJAG_00502","SJAG_00734","SJAG_04652","SJAG_03398","SJAG_01922","SJAG_00582","SJAG_00396","SJAG_03434","SJAG_04192","SJAG_02717","SJAG_03494","SJAG_02988","SJAG_03562","SJAG_04842","SJAG_04719","SJAG_04334","SJAG_00529","SJAG_01935","SJAG_00592","SJAG_03914","SJAG_02235","SJAG_01630","SJAG_01753","SJAG_03712","SJAG_00685","SJAG_03064","SJAG_02901","SJAG_04048","SJAG_04459","SJAG_00395","SJAG_00937","SJAG_02785","SJAG_03102","SJAG_03943","SJAG_00832","SJAG_02496","SJAG_05283","SJAG_00830","SJAG_02689","SJAG_03580","SJAG_03903","SJAG_02006","SJAG_02769","SJAG_01137","SJAG_02796","SJAG_00493","SJAG_02841","SJAG_02408","SJAG_04577","SJAG_00630","SJAG_01955"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62739],"is_not":false,"summary":null,"term":"GO:0019752"},{"annotations":[70147,66992,62318,113146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[114469,110386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[74957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008153"},{"annotations":[70356],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019413"},{"annotations":[78737,116406],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006083"},{"annotations":[93448,70567],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[119115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[119799,74093,96280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019676"},{"annotations":[72464],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000053"},{"annotations":[60644,78870,76923,80161,74675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009073"},{"annotations":[78616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009074"},{"annotations":[73128,73451,75831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000949"},{"annotations":[58091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006529"},{"annotations":[74305],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006528"},{"annotations":[79651],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006532"},{"annotations":[78134,81272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009102"},{"annotations":[79788,100275,111436,107480,74386,107850,118409,111438,100004,111437,107479,107481,111439,111441,111442,96536,105655,111440,107849,105398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[116150,91848,93108,96600,103274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009423"},{"annotations":[63443],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006101"},{"annotations":[80430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"},{"annotations":[112557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019344"},{"annotations":[61266,67929,78101],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006535"},{"annotations":[95317,100535,120251,105611],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006534"},{"annotations":[82309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019478"},{"annotations":[80892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036088"},{"annotations":[70226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006761"},{"annotations":[73026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046452"},{"annotations":[113592,105640],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052699"},{"annotations":[75189],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001561"},{"annotations":[79310,104070,93449,97022,72176,109510,69304,110752,65342,78886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006633"},{"annotations":[73332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009062"},{"annotations":[81684,75630,113376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[79679,93956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[93957,79683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[74299,95523,103661,78843],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006631"},{"annotations":[108112,110387,114470,70852,57453,61507,106813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046656"},{"annotations":[73028],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046655"},{"annotations":[81230,92178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006106"},{"annotations":[89441,90431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009450"},{"annotations":[57457],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009448"},{"annotations":[104637,113961,113864,106774,94949,89851,92889],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006536"},{"annotations":[73431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[73858,58100,74306],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006541"},{"annotations":[74074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006545"},{"annotations":[75286,74026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019264"},{"annotations":[79995,98424,76128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[90617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[107118,103051],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009436"},{"annotations":[81005,76507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050667"},{"annotations":[73099,75557,117845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009090"},{"annotations":[101792],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006102"},{"annotations":[113287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042852"},{"annotations":[70426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"},{"annotations":[113134,80428,100169,72275,113963,120469,112516,104638,108551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[80344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019544"},{"annotations":[80342,115260],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010121"},{"annotations":[104178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"},{"annotations":[72833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006533"},{"annotations":[115994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"},{"annotations":[113289,119800,60419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[81563,93721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006538"},{"annotations":[82244,65612,58382,60702,77638,80365,73094,78557],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000105"},{"annotations":[112558],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071269"},{"annotations":[105790,105311,112484,113151,115309,110357,92692],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901705"},{"annotations":[92693,81764,105312,76753,79098,115310,59939],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009098"},{"annotations":[113152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006551"},{"annotations":[102691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[78833,59412,80300,82241,81158,79756],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[100536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"},{"annotations":[100354,79882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009094"},{"annotations":[65944,92890,69012,79817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"},{"annotations":[80068,72211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"},{"annotations":[118971,81526,61789],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006564"},{"annotations":[74075],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006567"},{"annotations":[70278,75406,76132,79182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000162"},{"annotations":[59190,78011,78981,65286,81765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009099"},{"annotations":[75041],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006574"},{"annotations":[61288,61716,59918,63539],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019249"},{"annotations":[82344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903457"},{"annotations":[99874,99173,76973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[106339,74215],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[115822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042758"},{"annotations":[110407,80813,79223],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001676"},{"annotations":[65564,115509,78617,76984,79405,66219,98376,72121,78186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019878"},{"annotations":[63009,75206,81231],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006108"},{"annotations":[73806,76506,114026,72870,81004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009086"},{"annotations":[64321,112720,114763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006555"},{"annotations":[61967,74791,104811,76421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019243"},{"annotations":[61717,59919,107078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061727"},{"annotations":[72803],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[75038,78092],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[74329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006592"},{"annotations":[69156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006591"},{"annotations":[74304,108813],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006107"},{"annotations":[99697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[74321,79613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015940"},{"annotations":[77699],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033387"},{"annotations":[74663,101041,75298,81045,76558,89864,89427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[120588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006090"},{"annotations":[71970],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[114027,71624,65736,62316,78952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009088"},{"annotations":[78618,80686],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006571"},{"annotations":[72194,77156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[76881],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006780"},{"annotations":[93960,105485,75627,79681,74575],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving carboxylic acids, any organic acid containing one or more carboxyl (COOH) groups or anions (COO-).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":218,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00043":null,"SJAG_00099":null,"SJAG_00102":null,"SJAG_00106":null,"SJAG_00107":null,"SJAG_00120":null,"SJAG_00203":null,"SJAG_00224":null,"SJAG_00234":null,"SJAG_00248":null,"SJAG_00281":null,"SJAG_00305":null,"SJAG_00309":null,"SJAG_00337":null,"SJAG_00359":null,"SJAG_00392":null,"SJAG_00395":null,"SJAG_00396":null,"SJAG_00412":null,"SJAG_00432":null,"SJAG_00461":null,"SJAG_00493":null,"SJAG_00495":null,"SJAG_00502":null,"SJAG_00518":null,"SJAG_00529":null,"SJAG_00582":null,"SJAG_00592":null,"SJAG_00605":null,"SJAG_00630":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00673":null,"SJAG_00674":null,"SJAG_00685":null,"SJAG_00695":null,"SJAG_00706":null,"SJAG_00714":null,"SJAG_00734":null,"SJAG_00815":null,"SJAG_00830":null,"SJAG_00832":null,"SJAG_00839":null,"SJAG_00866":null,"SJAG_00869":null,"SJAG_00881":null,"SJAG_00902":null,"SJAG_00937":null,"SJAG_00944":null,"SJAG_00947":null,"SJAG_00964":null,"SJAG_00988":null,"SJAG_01019":null,"SJAG_01061":null,"SJAG_01126":null,"SJAG_01137":null,"SJAG_01139":null,"SJAG_01198":null,"SJAG_01238":null,"SJAG_01271":null,"SJAG_01300":null,"SJAG_01310":null,"SJAG_01346":null,"SJAG_01356":null,"SJAG_01396":null,"SJAG_01402":null,"SJAG_01404":null,"SJAG_01432":null,"SJAG_01455":null,"SJAG_01458":null,"SJAG_01461":null,"SJAG_01466":null,"SJAG_01574":null,"SJAG_01592":null,"SJAG_01596":null,"SJAG_01630":null,"SJAG_01753":null,"SJAG_01766":null,"SJAG_01880":null,"SJAG_01903":null,"SJAG_01922":null,"SJAG_01935":null,"SJAG_01946":null,"SJAG_01955":null,"SJAG_01989":null,"SJAG_02006":null,"SJAG_02007":null,"SJAG_02009":null,"SJAG_02106":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02158":null,"SJAG_02176":null,"SJAG_02225":null,"SJAG_02235":null,"SJAG_02276":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02313":null,"SJAG_02369":null,"SJAG_02388":null,"SJAG_02400":null,"SJAG_02408":null,"SJAG_02450":null,"SJAG_02496":null,"SJAG_02505":null,"SJAG_02689":null,"SJAG_02717":null,"SJAG_02734":null,"SJAG_02741":null,"SJAG_02763":null,"SJAG_02769":null,"SJAG_02785":null,"SJAG_02791":null,"SJAG_02796":null,"SJAG_02832":null,"SJAG_02841":null,"SJAG_02885":null,"SJAG_02901":null,"SJAG_02945":null,"SJAG_02960":null,"SJAG_02972":null,"SJAG_02985":null,"SJAG_02988":null,"SJAG_03055":null,"SJAG_03064":null,"SJAG_03102":null,"SJAG_03124":null,"SJAG_03130":null,"SJAG_03141":null,"SJAG_03152":null,"SJAG_03167":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03224":null,"SJAG_03243":null,"SJAG_03266":null,"SJAG_03275":null,"SJAG_03290":null,"SJAG_03293":null,"SJAG_03306":null,"SJAG_03310":null,"SJAG_03312":null,"SJAG_03313":null,"SJAG_03373":null,"SJAG_03398":null,"SJAG_03434":null,"SJAG_03457":null,"SJAG_03471":null,"SJAG_03485":null,"SJAG_03494":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03556":null,"SJAG_03562":null,"SJAG_03580":null,"SJAG_03614":null,"SJAG_03641":null,"SJAG_03659":null,"SJAG_03660":null,"SJAG_03671":null,"SJAG_03679":null,"SJAG_03712":null,"SJAG_03743":null,"SJAG_03775":null,"SJAG_03786":null,"SJAG_03804":null,"SJAG_03828":null,"SJAG_03856":null,"SJAG_03861":null,"SJAG_03881":null,"SJAG_03903":null,"SJAG_03909":null,"SJAG_03914":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_03985":null,"SJAG_04007":null,"SJAG_04042":null,"SJAG_04048":null,"SJAG_04054":null,"SJAG_04098":null,"SJAG_04107":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04156":null,"SJAG_04192":null,"SJAG_04305":null,"SJAG_04334":null,"SJAG_04362":null,"SJAG_04404":null,"SJAG_04425":null,"SJAG_04449":null,"SJAG_04459":null,"SJAG_04495":null,"SJAG_04549":null,"SJAG_04570":null,"SJAG_04577":null,"SJAG_04652":null,"SJAG_04674":null,"SJAG_04688":null,"SJAG_04719":null,"SJAG_04726":null,"SJAG_04747":null,"SJAG_04827":null,"SJAG_04842":null,"SJAG_04843":null,"SJAG_04913":null,"SJAG_04972":null,"SJAG_05007":null,"SJAG_05200":null,"SJAG_05283":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_06635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"carboxylic acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-389661"],"synonyms":[{"name":"carboxylic acid metabolism","type":"exact"}],"termid":"GO:0019752","terms_by_termid":{"GO:0000053":null,"GO:0000105":null,"GO:0000162":null,"GO:0000949":null,"GO:0001561":null,"GO:0001676":null,"GO:0006083":null,"GO:0006086":null,"GO:0006090":null,"GO:0006101":null,"GO:0006102":null,"GO:0006106":null,"GO:0006107":null,"GO:0006108":null,"GO:0006110":null,"GO:0006528":null,"GO:0006529":null,"GO:0006532":null,"GO:0006533":null,"GO:0006534":null,"GO:0006535":null,"GO:0006536":null,"GO:0006538":null,"GO:0006541":null,"GO:0006542":null,"GO:0006545":null,"GO:0006551":null,"GO:0006555":null,"GO:0006564":null,"GO:0006567":null,"GO:0006571":null,"GO:0006574":null,"GO:0006591":null,"GO:0006592":null,"GO:0006631":null,"GO:0006633":null,"GO:0006636":null,"GO:0006761":null,"GO:0006780":null,"GO:0008153":null,"GO:0009062":null,"GO:0009073":null,"GO:0009074":null,"GO:0009086":null,"GO:0009088":null,"GO:0009090":null,"GO:0009094":null,"GO:0009098":null,"GO:0009099":null,"GO:0009102":null,"GO:0009107":null,"GO:0009257":null,"GO:0009423":null,"GO:0009436":null,"GO:0009448":null,"GO:0009450":null,"GO:0010121":null,"GO:0010133":null,"GO:0015940":null,"GO:0019240":null,"GO:0019243":null,"GO:0019249":null,"GO:0019264":null,"GO:0019280":null,"GO:0019284":null,"GO:0019344":null,"GO:0019367":null,"GO:0019413":null,"GO:0019427":null,"GO:0019450":null,"GO:0019464":null,"GO:0019478":null,"GO:0019509":null,"GO:0019544":null,"GO:0019676":null,"GO:0019752":null,"GO:0019878":null,"GO:0030497":null,"GO:0033387":null,"GO:0034625":null,"GO:0036088":null,"GO:0042450":null,"GO:0042758":null,"GO:0042759":null,"GO:0042761":null,"GO:0042852":null,"GO:0042853":null,"GO:0045717":null,"GO:0045820":null,"GO:0046452":null,"GO:0046655":null,"GO:0046656":null,"GO:0050667":null,"GO:0052699":null,"GO:0055129":null,"GO:0061613":null,"GO:0061621":null,"GO:0061727":null,"GO:0070981":null,"GO:0071266":null,"GO:0071269":null,"GO:0097054":null,"GO:1900535":null,"GO:1901705":null,"GO:1903457":null,"GO:1990181":null}}


id: PBO:0034564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_molecular_function","termid":"PBO:0034564"}


id: SO:0100013
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Hydrophobic regions are regions with a low affinity for water.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_region","termid":"SO:0000839"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"hydrophobic_region_of_peptide","synonyms":[{"name":"hydropathic","type":"related"},{"name":"hydrophobic region of peptide","type":"related"},{"name":"hydrophobic_region","type":"exact"},{"name":"hydrophobicity","type":"related"}],"termid":"SO:0100013"}


id: PBO:0031453
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-branched_nuclear_inner_membrane","termid":"PBO:0031453"}


id: GO:0033804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: S-adenosyl-L-methionine + glycine = S-adenosyl-L-homocysteine + sarcosine, and S-adenosyl-L-methionine + sarcosine = S-adenosyl-L-homocysteine + N,N-dimethylglycine.","definition_xrefs":["EC:2.1.1.156"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine/sarcosine N-methyltransferase activity (obsolete GO:0033804)","synonyms":[{"name":"ApGSMT","type":"related"},{"name":"GMT","type":"related"},{"name":"GSMT","type":"related"},{"name":"S-adenosyl-L-methionine:sarcosine N-methyltransferase activity","type":"related"},{"name":"glycine sarcosine N-methyltransferase activity","type":"related"},{"name":"glycine-sarcosine methyltransferase activity","type":"related"},{"name":"glycine/sarcosine N-methyltransferase activity","type":"exact"}],"termid":"GO:0033804"}


id: PBO:0056349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP6 domain containing 1","termid":"PBO:0056349"}


id: MONDO:0004095
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A group of heterogeneous lymphoid tumors generally expressing one or more B-cell antigens or representing malignant transformations of B-lymphocytes.","definition_xrefs":["MESH:D016393"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte disorder","termid":"MONDO:0004805"},{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C27907","GARD:5877","MEDGEN:86953","UMLS:C0079731","DOID:707"],"synonyms":[{"name":"B-cell lymphocytic neoplasm","type":"exact"},{"name":"B-cell lymphoma","type":"related"},{"name":"B-cell neoplasm","type":"exact"},{"name":"lymphoma, B-cell","type":"related"}],"termid":"MONDO:0004095","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0004095"}}}


id: GO:0036261
data:
  {"annotated_genes":["SJAG_03901"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76965],"is_not":false,"summary":null,"term":"GO:0036261"}]},"cv_name":"biological_process","definition":"Hypermethylation of the 7-(mono)methylguanosine (m(7)G) cap structure at the 2' position of the guanosine residue to convert a mono-methylated cap to a 2,2,7-trimethylguanosine cap structure. This type of cap modification occurs on small nuclear RNAs (snRNAs) and small nucleolar RNAs (snoRNAs) and is dependent on prior guanine-N7 methylation.","definition_xrefs":["GOC:BHF","GOC:mah","GOC:krc","GOC:rl","PMID:18775984","GOC:bf","PMID:11983179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA methylation","termid":"GO:0001510"},{"relation_name":"is_a","term_name":"RNA capping","termid":"GO:0036260"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"7-methylguanosine cap hypermethylation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"2,2,7-trimethylguanosine cap formation","type":"exact"},{"name":"TMG cap formation","type":"exact"},{"name":"conversion of m(7)G to m(3)G","type":"exact"},{"name":"hypermethylation of snRNA cap","type":"narrow"},{"name":"hypermethylation of snoRNA cap","type":"narrow"},{"name":"m(7)G cap hypermethylation","type":"exact"},{"name":"snRNA capping","type":"narrow"},{"name":"snoRNA capping","type":"narrow"}],"termid":"GO:0036261","terms_by_termid":{"GO:0036261":null}}


id: GO:0004595
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + pantetheine 4'-phosphate = 3'-dephospho-CoA + diphosphate.","definition_xrefs":["RHEA:19801","EC:2.7.7.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016779","GO:0016740"],"is_obsolete":false,"name":"pantetheine-phosphate adenylyltransferase activity","secondary_identifiers":["MetaCyc:PANTEPADENYLYLTRAN-RXN","KEGG_REACTION:R03035","Reactome:R-HSA-196754"],"synonyms":[{"name":"3'-dephospho-CoA pyrophosphorylase activity","type":"related"},{"name":"ATP:pantetheine-4'-phosphate adenylyltransferase activity","type":"related"},{"name":"ATP:pantetheine-phosphate adenylyltransferase activity","type":"exact"},{"name":"PPAT activity","type":"related"},{"name":"dephospho-CoA diphosphorylase activity","type":"related"},{"name":"dephospho-CoA pyrophosphorylase activity","type":"related"},{"name":"dephospho-coenzyme A pyrophosphorylase activity","type":"related"},{"name":"pantetheine phosphate adenylyltransferase activity","type":"related"},{"name":"phosphopantetheine adenylyltransferase activity","type":"exact"}],"termid":"GO:0004595"}


id: GO:0046543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the secondary female sexual characteristics over time, from their formation to the mature structures. In female humans, these include growth of axillary and pubic hair, breast development and menstrual periods. Their development occurs in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"development of secondary sexual characteristics","termid":"GO:0045136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of secondary female sexual characteristics","termid":"GO:0046543"}


id: MONDO:0018480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carcinoma of esophagus","termid":"MONDO:0019086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of esophagus, salivary gland type","secondary_identifiers":["Orphanet:418945","GARD:21741","UMLS:C5190854","MEDGEN:1678006"],"synonyms":[{"name":"esophageal carcinoma, salivary gland type","type":"exact"}],"termid":"MONDO:0018480","xrefs":{"Monarch":{"xref_id":"0018480"}}}


id: PBO:0026824
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium_export","termid":"PBO:0026824"}


id: PBO:0062238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily BB member 1 pseudogene","termid":"PBO:0062238"}


id: PBO:0017778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex TPR lobe subcomplex subunit Apc3","termid":"PBO:0017778"}


id: PBO:0066854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 154","termid":"PBO:0066854"}


id: PBO:0027424
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_during_cellular_response_to_salt_stress","termid":"PBO:0027424"}


id: PBO:0003889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Rrs1 (predicted)","termid":"PBO:0003889"}


id: MONDO:0016402
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial disease with epilepsy (obsolete MONDO:0016402)","secondary_identifiers":["Orphanet:225700"],"termid":"MONDO:0016402","xrefs":{"Monarch":{"xref_id":"0016402"}}}


id: GO:0048813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a dendrite are generated and organized.","definition_xrefs":["ISBN:0198506732","PMID:22683681","GOC:bc","GOC:aruk","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection morphogenesis","termid":"GO:0048812"},{"relation_name":"part_of","term_name":"dendrite development","termid":"GO:0016358"},{"relation_name":"part_of","term_name":"cell morphogenesis involved in neuron differentiation","termid":"GO:0048667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendrite morphogenesis","termid":"GO:0048813"}


id: PBO:0004169
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-terminal region is sufficent for localization","termid":"PBO:0004169"}


id: PBO:0084159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High affinity uridine permease, localizes to the plasma membrane; also mediates low but significant transport of the cytotoxic nucleoside analog 5-fluorouridine; not involved in uracil transport; relative distribution to the vacuole increases upon DNA replication stress","termid":"PBO:0084159"}


id: GO:0050781
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,4,6-trichlorophenol + 2 H+ + 2 e- = 2,4-dichlorophenol + HCl.","definition_xrefs":["GOC:ai","PMID:12697029"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"ortho-trichlorophenol reductive dehalogenase activity","synonyms":[{"name":"2,4,6-TCP reductive dehalogenase activity","type":"exact"},{"name":"2,4,6-trichlorophenol reductive dehalogenase activity","type":"exact"}],"termid":"GO:0050781"}


id: PBO:0079573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin B pseudogene 5","termid":"PBO:0079573"}


id: PBO:0068274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease A family member 11 (inactive)","termid":"PBO:0068274"}


id: GO:0008158
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a member of the hedgehog protein family and transmitting the signal across the membrane to initiate a change in cell activity.","definition_xrefs":["GOC:go_curators","PMID:9278137","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"hedgehog receptor activity","synonyms":[{"name":"patched activity","type":"exact"}],"termid":"GO:0008158"}


id: PBO:0070288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 29","termid":"PBO:0070288"}


id: GO:0047279
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + UDP-D-galactose = 1-O-alpha-D-galactosyl-sn-glycerol 3-phosphate + H+ + UDP.","definition_xrefs":["EC:2.4.1.96","RHEA:20341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"sn-glycerol-3-phosphate 1-galactosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R00854","MetaCyc:2.4.1.96-RXN"],"synonyms":[{"name":"UDP-Gal:sn-glycero-3-phosphoric acid 1-alpha-galactosyl-transferase activity","type":"related"},{"name":"UDP-galactose:sn-glycerol-3-phosphate 1-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sn-glycerol-3-phosphate 1-alpha-D-galactosyltransferase activity","type":"related"},{"name":"UDPgalactose:sn-glycerol-3-phosphate alpha-D-galactosyltransferase activity","type":"related"},{"name":"glycerol 3-phosphate 1alpha-galactosyltransferase activity","type":"related"},{"name":"isofloridoside-phosphate synthase activity","type":"related"},{"name":"uridine diphosphogalactose-glycerol phosphate galactosyltransferase activity","type":"related"}],"termid":"GO:0047279"}


id: PBO:0041961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen and calcium binding EGF domains 1","termid":"PBO:0041961"}


id: PBO:0046414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A1","termid":"PBO:0046414"}


id: GO:0016496
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with substance P, the peptide Arg-Pro-Lys-Pro-Gln-Gln-Phe-Phe-Gly-Leu-Met, to initiate a change in cell activity.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tachykinin receptor activity","termid":"GO:0004995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"substance P receptor activity","termid":"GO:0016496"}


id: MONDO:0014551
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"short stature with nonspecific skeletal abnormalities","termid":"MONDO:0975810"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short stature with nonspecific skeletal abnormalities 1","secondary_identifiers":["OMIM:616255"],"synonyms":[{"name":"SNSK","type":"exact"},{"name":"short stature with nonspecific skeletal abnormalities 1","type":"exact"}],"termid":"MONDO:0014551","xrefs":{"Monarch":{"xref_id":"0014551"}}}


id: PBO:0082369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Basic helix-loop-helix (bHLH) transcription factor of the myc-family; activates transcription cooperatively with Pho2p in response to phosphate limitation; binding to 'CACGTG' motif is regulated by chromatin restriction, competitive binding of Cbf1p to the same DNA binding motif and cooperation with Pho2p; function is regulated by phosphorylation at multiple sites and by phosphate availability","termid":"PBO:0082369"}


id: GO:0072728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a Gentian violet stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to Gentian violet","synonyms":[{"name":"response to crystal violet","type":"exact"},{"name":"response to {4-[Bis-(4-dimethylamino-phenyl)-methylene]-cyclohexa-2,5-dienylidene}-dimethyl-ammonium chloride","type":"exact"}],"termid":"GO:0072728"}


id: PBO:0090618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDHD family phospholipase","termid":"PBO:0090618"}


id: PBO:0108928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FBL pseudogene 1","termid":"PBO:0108928"}


id: PBO:0074364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single-pass membrane protein with coiled-coil domains 2","termid":"PBO:0074364"}


id: GO:0006423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling cysteine to cysteinyl-tRNA, catalyzed by cysteinyl-tRNA synthetase. A cysteinyl-tRNA synthetase is a class-I synthetase. The activated amino acid is transferred to the 2'-OH group of a cysteine-accetping tRNA. The 2'-O-aminoacyl-tRNA will ultimately migrate to the 3' position via transesterification.","definition_xrefs":["GOC:mcc","ISBN:0716730510"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA aminoacylation for protein translation","termid":"GO:0006418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006399","GO:0010467","GO:0006520"],"is_obsolete":false,"name":"cysteinyl-tRNA aminoacylation","termid":"GO:0006423"}


id: PBO:0045353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DOP1 leucine zipper like protein B","termid":"PBO:0045353"}


id: GO:0102223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4 H+ + 15-cis-4,4'-diapophytoene + 4 FAD = 4,4'-diapolycopene + 4 FADH2. This reaction consists of four successive dehydrogenations that lead to the introduction of three double bonds into 4,4'-diapophytoene (dehydrosqualene), with 4,4'-diapophytofluene, 4,4'-diapo-zeta-carotene and 4,4'-diapolycopene as intermediates, and 4,4'-diapolycopene as the end product.","definition_xrefs":["PMID:8002598","RHEA:31391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, with a flavin as acceptor","termid":"GO:0052890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"4,4'-diapophytoene desaturase (4,4'-diaponeurosporene-forming)","secondary_identifiers":["MetaCyc:RXN-12224","EC:1.3.8.2","GO:0102225","GO:0102962","GO:0102961"],"synonyms":[{"name":"4,4'-diapo-zeta-carotene desaturase activity","type":"narrow"},{"name":"4,4'-diaponeurosporene desaturase activity","type":"narrow"},{"name":"4,4'-diapophytoene desaturase activity","type":"broad"},{"name":"4,4'-diapophytofluene desaturase activity","type":"narrow"}],"termid":"GO:0102223"}


id: MONDO:0700169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous T-cell lymphoma occurring in a dog.","definition_xrefs":["NCIT:C186279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canine lymphoma","termid":"MONDO:0700145"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"cancer, dog","termid":"MONDO:1012570"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canine cutaneous t-cell lymphoma","termid":"MONDO:0700169","xrefs":{"Monarch":{"xref_id":"0700169"}}}


id: PBO:0002075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp2","termid":"PBO:0002075"}


id: GO:0044542
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont initiates, promotes, or enhances the normal activation of plasminogen, the pathway resulting in the processing of inactive plasminogen to active plasmin in the host organism. This can facilitate the dissemination of the symbiont into host tissues. It can also be used to destroy complement, opsonins as well as antibacterial proteins like histones.","definition_xrefs":["PMID:34305859","PMID:18070889","PMID:27533300"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated activation of host plasminogen","synonyms":[{"name":"plasminogen activation in another organism","type":"broad"},{"name":"plasminogen activation in other organism","type":"broad"}],"termid":"GO:0044542"}


id: PBO:0030680
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_spore","termid":"PBO:0030680"}


id: PBO:0000901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPI-coated vesicle associated protein (predicted)","termid":"PBO:0000901"}


id: PBO:0043770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor COX19","termid":"PBO:0043770"}


id: GO:0070841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an inclusion body.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"inclusion body assembly","termid":"GO:0070841"}


id: FYPO:0001760
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cell separation after cytokinesis is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cell separation after cytokinesis","synonyms":[{"name":"normal cell separation after cytokinesis during mitotic cell cycle","type":"related"},{"name":"normal cell separation after cytokinesis during vegetative growth","type":"exact"},{"name":"normal cell separation after cytokinesis following mitosis","type":"exact"},{"name":"normal mitotic cytokinetic cell separation","type":"exact"},{"name":"normal septum digestion after cytokinesis","type":"exact"}],"termid":"FYPO:0001760"}


id: PBO:0015266
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glucosidase 2 Beta Subunit","termid":"PBO:0015266"}


id: GO:0030408
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-formimidoyltetrahydrofolate + glycine = (6S)-5,6,7,8-tetrahydrofolate + N-formimidoylglycine.","definition_xrefs":["RHEA:24288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxymethyl-, formyl- and related transferase activity","termid":"GO:0016742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016741","GO:0003674"],"is_obsolete":false,"name":"glycine formimidoyltransferase activity","secondary_identifiers":["MetaCyc:GLYCINE-FORMIMINOTRANSFERASE-RXN","EC:2.1.2.4","KEGG_REACTION:R02729"],"synonyms":[{"name":"5-formimidoyltetrahydrofolate:glycine N-formimidoyltransferase activity","type":"related"},{"name":"FIG formiminotransferase activity","type":"related"},{"name":"formimidoyltransferase activity","type":"broad"},{"name":"formiminoglycine formiminotransferase activity","type":"related"},{"name":"formiminotransferase activity","type":"broad"},{"name":"glycine formiminotransferase activity","type":"exact"}],"termid":"GO:0030408"}


id: PBO:0002112
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. cerevisiae PN uptake is mediated by the unrelated transporter Tpn1p","termid":"PBO:0002112"}


id: PR:P36623
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26F1.06","secondary_identifiers":["UniProtKB:P36623"],"synonyms":[{"name":"BPG-dependent PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MPGM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PGAM (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Phosphoglyceromutase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPAC26F1.06","type":"related"},{"name":"Spom972h-gpmA","type":"exact"}],"termid":"PR:P36623"}


id: PBO:0071743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 41","termid":"PBO:0071743"}


id: MOD:00860
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that produces an amino acid residue containing an exogenous sulfur atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur containing modified residue","termid":"MOD:00860"}


id: GO:0071338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of hair follicle cell proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of hair follicle cell proliferation","termid":"GO:0071336"},{"relation_name":"positively_regulates","term_name":"hair follicle cell proliferation","termid":"GO:0071335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hair follicle cell proliferation","synonyms":[{"name":"activation of hair follicle cell proliferation","type":"narrow"},{"name":"stimulation of hair follicle cell proliferation","type":"narrow"},{"name":"up regulation of hair follicle cell proliferation","type":"exact"},{"name":"up-regulation of hair follicle cell proliferation","type":"exact"},{"name":"upregulation of hair follicle cell proliferation","type":"exact"}],"termid":"GO:0071338"}


id: PBO:0004898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Npr2/3 complex subunit Npr3 (predicted)","termid":"PBO:0004898"}


id: MOD:00969
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CAM-Cys vs PAM-Cys","termid":"MOD:00969"}


id: PBO:0087554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNase MRP, nuclear RNase P and telomerase complexes; RNase MRP cleaves pre-rRNA, nuclear RNase P cleaves tRNA precursors to generate mature 5' ends and facilitates turnover of nuclear RNAs, while telomerase replenishes telomeric DNA; binds to the RPR1 RNA subunit in RNase P","termid":"PBO:0087554"}


id: MONDO:0013645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive syndromic cerebellar ataxia in which the cause of the disease is a mutation in the SYT14 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive syndromic cerebellar ataxia","termid":"MONDO:0020047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 11","secondary_identifiers":["Orphanet:284271","UMLS:C5190803","GARD:17312","OMIM:614229","MEDGEN:1681191","DOID:0080063"],"synonyms":[{"name":"SCAR11","type":"exact"},{"name":"SYT14 autosomal recessive syndromic cerebellar ataxia","type":"exact"},{"name":"autosomal recessive cerebellar ataxia-psychomotor retardation syndrome","type":"related"},{"name":"autosomal recessive spinocerebellar ataxia 11","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 11","type":"exact"},{"name":"autosomal recessive syndromic cerebellar ataxia caused by mutation in SYT14","type":"exact"},{"name":"spinocerebellar ataxia, autosomal recessive 11","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive type 11","type":"exact"}],"termid":"MONDO:0013645","xrefs":{"Monarch":{"xref_id":"0013645"}}}


id: PBO:0055294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2721","termid":"PBO:0055294"}


id: GO:0097680
data:
  {"annotated_genes":["SJAG_04199","SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115950,118384],"is_not":false,"summary":null,"term":"GO:0097680"}]},"cv_name":"biological_process","definition":"An instance of double-strand break repair via nonhomologous end joining that requires a number of factors important for V(D)J recombination, including the KU70/80 heterodimer (KU), XRCC4, ligase IV, and DNA-PKcs in mammals. It does not produce translocations (as opposed to the alternative nonhomologous end joining).","definition_xrefs":["GOC:rph","PMID:18584027"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double-strand break repair via nonhomologous end joining","termid":"GO:0006303"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02527":null,"SJAG_04199":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"double-strand break repair via classical nonhomologous end joining","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"C-NHEJ","type":"related"},{"name":"canonical nonhomologous end joining","type":"exact"}],"termid":"GO:0097680","terms_by_termid":{"GO:0097680":null}}


id: PBO:0072271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23","termid":"PBO:0072271"}


id: PBO:0084220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homoserine kinase; conserved protein required for threonine biosynthesis; long-lived protein that is preferentially retained in mother cells and forms cytoplasmic filaments; expression is regulated by the GCN4-mediated general amino acid control pathway","termid":"PBO:0084220"}


id: MONDO:0013938
data:
  {"annotated_genes":["SJAG_05950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89237],"is_not":false,"summary":null,"term":"MONDO:0013938"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"peroxisome biogenesis disorder","termid":"MONDO:0019234"},{"relation_name":"is_a","term_name":"peroxisome biogenesis disorder due to PEX26 defect","termid":"MONDO:0100271"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005244","MONDO:0019053","MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"peroxisome biogenesis disorder 7A (Zellweger)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080482","GARD:15866","MEDGEN:854881","OMIM:614872","UMLS:C3888385"],"synonyms":[{"name":"PBD7A","type":"related"},{"name":"peroxisome biogenesis disorder 7A (Zellweger)","type":"exact"},{"name":"peroxisome biogenesis disorder, complementation group 8","type":"related"},{"name":"peroxisome biogenesis disorder, complementation group A","type":"related"}],"termid":"MONDO:0013938","terms_by_termid":{"MONDO:0013938":null},"xrefs":{"Monarch":{"xref_id":"0013938"}}}


id: MONDO:0015923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of peripheral neuropathy that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"acquired peripheral neuropathy","secondary_identifiers":["Orphanet:182086","GARD:20243","MEDGEN:1842976","UMLS:C5680596"],"synonyms":[{"name":"acquired peripheral neuropathy","type":"exact"}],"termid":"MONDO:0015923","xrefs":{"Monarch":{"xref_id":"0015923"}}}


id: PBO:0012535
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-results_in_acquisition_of_features_of","termid":"PBO:0012535"}


id: GO:0044172
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex system of membrane-bounded compartments located between host cell endoplasmic reticulum (ER) and the host Golgi complex, with a distinctive membrane protein composition; involved in ER-to-Golgi transport.","definition_xrefs":["GOC:jl","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host intracellular membrane-bounded organelle","termid":"GO:0033648"},{"relation_name":"is_a","term_name":"host cell cytoplasm part","termid":"GO:0033655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell endoplasmic reticulum-Golgi intermediate compartment","synonyms":[{"name":"host ER-Golgi intermediate compartment","type":"exact"},{"name":"host cell ER-Golgi intermediate compartment","type":"exact"}],"termid":"GO:0044172"}


id: PBO:0080144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vesicle amine transport 1 like","termid":"PBO:0080144"}


id: PBO:0087846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Topoisomerase I; nuclear enzyme that relieves torsional strain in DNA by cleaving and re-sealing the phosphodiester backbone; relaxes both positively and negatively supercoiled DNA; functions in replication, transcription, and recombination; role in processing ribonucleoside monophosphates in genomic DNA into irreversible single-strand breaks; enzymatic activity and interaction with Nsr1p are negatively regulated by polyphosphorylation","termid":"PBO:0087846"}


id: GO:0050494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a C-terminal peptidyl-glycine ethanolamide-linked glycosylsphingolipidinositol (GSI) anchor following hydrolysis of a glycyl-peptide bond in the carboxy-terminal region of a membrane-associated protein.","definition_xrefs":["RESID:AA0165"],"gene_count":0,"genotype_count":0,"name":"obsolete GSI anchor biosynthetic process via N-glycyl-glycosylsphingolipidinositolethanolamine (obsolete GO:0050494)","synonyms":[{"name":"GSI anchor anabolism via N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor formation via N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"},{"name":"GSI anchor synthesis via N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"GO:0050494"}


id: PBO:0004070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase (predicted)","termid":"PBO:0004070"}


id: PBO:0030786
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-elongated_aseptate_vegetative_cell","termid":"PBO:0030786"}


id: GO:1901909
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81203],"is_not":false,"summary":null,"term":"GO:1901909"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of diadenosine hexaphosphate.","definition_xrefs":["PMID:10090752","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate catabolic process","termid":"GO:0015961"},{"relation_name":"is_a","term_name":"diadenosine hexaphosphate metabolic process","termid":"GO:1901908"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"diadenosine hexaphosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"diadenosine hexaphosphate catabolism","type":"exact"},{"name":"diadenosyl hexaphosphate breakdown","type":"exact"},{"name":"diadenosyl hexaphosphate catabolic process","type":"exact"},{"name":"diadenosyl hexaphosphate catabolism","type":"exact"},{"name":"diadenosyl hexaphosphate degradation","type":"exact"}],"termid":"GO:1901909","terms_by_termid":{"GO:1901909":null}}


id: PBO:0027204
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_microtubule_depolymerization_at_minus_end","termid":"PBO:0027204"}


id: PBO:0036005
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_and_H3-K14_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0036005"}


id: GO:1902556
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex which is capable of phosphatidylinositol transporter activity.","definition_xrefs":["PMID:9890948","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter complex","termid":"GO:1990351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol transporter complex","termid":"GO:1902556"}


id: PR:Q9UTF7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC1B2.03c gene.","definition_xrefs":["UniProtKB:Q9UTF7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongation of fatty acids protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B2.03c","synonyms":[{"name":"3-keto acyl-CoA synthase SPAC1B2.03c (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPAC1B2.03c","type":"exact"},{"name":"very-long-chain 3-oxoacyl-CoA synthase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTF7"}


id: GO:0003336
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The delamination process that results in the shedding of a corneocyte from the surface of the epidermis.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"delamination","termid":"GO:0060232"},{"relation_name":"part_of","term_name":"corneocyte development","termid":"GO:0003335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"corneocyte desquamation","synonyms":[{"name":"epidermal desquamation","type":"exact"}],"termid":"GO:0003336"}


id: MONDO:0019934
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosomal disorder in which the chromosomal constitution of a cell containing multiples of the normal number of chromosomes; includes triploidy (symbol: 3N), tetraploidy (symbol: 4N), etc.","definition_xrefs":["MESH:D011123"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal disorder","termid":"MONDO:0019040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploidy","secondary_identifiers":["GARD:19348","icd11.foundation:1286128770","MEDGEN:18567","Orphanet:96321","SCTID:72991005","UMLS:C0032578"],"termid":"MONDO:0019934","xrefs":{"Monarch":{"xref_id":"0019934"}}}


id: MOD:01778
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a C-terminal glycine residue to N-(glycyl)-L-cysteine by forming a peptide bond with a free L-cysteine.","definition_xrefs":["PubMed:18771296","PubMed:18842002","PubMed:18799456","RESID:AA0529"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-(glycyl)-L-cysteine","synonyms":[{"name":"(2R)-2-[(aminoacetyl)amino]-3-sulfanylpropanoic acid","type":"exact"},{"name":"MOD_RES CysO-cysteine adduct","type":"exact"},{"name":"N-(2-amino-1-oxoethyl)cysteine","type":"exact"},{"name":"N-(glycyl)-L-cysteine","type":"exact"}],"termid":"MOD:01778"}


id: MONDO:0014615
data:
  {"annotated_genes":["SJAG_03206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87272],"is_not":false,"summary":null,"term":"MONDO:0014615"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"photosensitive trichothiodystrophy","termid":"MONDO:0002470"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03206":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 2, photosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16100","OMIM:616390","DOID:0111869","MEDGEN:905904","NCIT:C173103","UMLS:C4225344"],"synonyms":[{"name":"TTD2","type":"related"},{"name":"trichothiodystrophy 2, photosensitive","type":"exact"}],"termid":"MONDO:0014615","terms_by_termid":{"MONDO:0014615":null},"xrefs":{"Monarch":{"xref_id":"0014615"}}}


id: MONDO:0016882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 20 disorder","termid":"MONDO:0700025"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 20","secondary_identifiers":["MEDGEN:1825964","UMLS:C5679662","Orphanet:261846","GARD:20805"],"synonyms":[{"name":"partial deletion of chromosome type 20","type":"exact"},{"name":"partial monosomy of chromosome 20","type":"exact"}],"termid":"MONDO:0016882","xrefs":{"Monarch":{"xref_id":"0016882"}}}


id: PBO:0027573
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nuclear_envelope_morphology_during_mitosis","termid":"PBO:0027573"}


id: PBO:0086284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with a role in cellular adhesion and filamentous growth; also endosome-to-vacuole sorting; similar to Tmn3p; member of Transmembrane Nine family of proteins with 9 transmembrane segments; EMP70 has a paralog, TMN2, that arose from the whole genome duplication","termid":"PBO:0086284"}


id: PBO:0091390
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPX domain containing protein","termid":"PBO:0091390"}


id: GO:0010097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a floral organ primordium acquires stamen or staminode identity. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"specification of floral organ identity","termid":"GO:0010093"},{"relation_name":"part_of","term_name":"stamen formation","termid":"GO:0048455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of stamen identity","termid":"GO:0010097"}


id: PBO:0028079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype","termid":"PBO:0028079"}


id: MONDO:0020747
data:
  {"annotated_genes":["SJAG_04277"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88155],"is_not":false,"summary":null,"term":"MONDO:0020747"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sitosterolemia","termid":"MONDO:0008863"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04277":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"sitosterolemia 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:210250","UMLS:C2749759","MEDGEN:440869","DOID:0070634"],"synonyms":[{"name":"STSL1","type":"exact"},{"name":"sitosterolemia 1","type":"exact"}],"termid":"MONDO:0020747","terms_by_termid":{"MONDO:0020747":null},"xrefs":{"Monarch":{"xref_id":"0020747"}}}


id: MONDO:0021002
data:
  {"annotated_genes":["SJAG_01213"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88721],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010408"}]},"cv_name":"mondo","definition":"A disease characterized by the presence of syndactyly, including syndromic and non-syndromic forms.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01213":null},"genotype_count":0,"is_obsolete":false,"name":"syndactyly","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:755.1","MEDGEN:52619","MESH:D013576","ICD10CM:Q70","DOID:11193","HP:0001159","UMLS:C0039075","MedDRA:10042778"],"synonyms":[{"name":"syndactyly (disease)","type":"exact"}],"termid":"MONDO:0021002","terms_by_termid":{"MONDO:0010408":null},"xrefs":{"Monarch":{"xref_id":"0021002"}}}


id: PBO:0091359
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dpb4-interacting, RRM and IDR-containing factor","termid":"PBO:0091359"}


id: PBO:0110257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC associated protein Ctr1","termid":"PBO:0110257"}


id: PBO:0028718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_bipolar_index","termid":"PBO:0028718"}


id: PBO:0044537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DALR anticodon binding domain containing 3","termid":"PBO:0044537"}


id: PBO:0003089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic inhibitor kinase Mik1","termid":"PBO:0003089"}


id: PBO:0047267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 246 member B","termid":"PBO:0047267"}


id: PATO:0001599
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's being relocated around an axis.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rotated","synonyms":[{"name":"rotation","type":"exact"}],"termid":"PATO:0001599"}


id: PBO:0062850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"otoancorin","termid":"PBO:0062850"}


id: PR:Q9HDV1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug180 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDV1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"steryl acetyl hydrolase mug81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.02","synonyms":[{"name":"Spom972h-mug180","type":"exact"},{"name":"meiotically up-regulated gene 180 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDV1"}


id: PBO:0067688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5.8S ribosomal 5","termid":"PBO:0067688"}


id: PBO:0057861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR3171 host gene","termid":"PBO:0057861"}


id: MONDO:1012709
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinal disorder characterized by multiple areas of retinal degeneration that occurs in dogs due to a variant in exon 10 of the BEST1 gene.","definition_xrefs":["PMID:21197113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal degeneration, non-human animal","termid":"MONDO:1010326"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal retinopathy 3, BEST1-related, dog","secondary_identifiers":["OMIA:001554-9615"],"synonyms":[{"name":"CMR3","type":"exact"},{"name":"multifocal retinopathy 3, dog","type":"related"}],"termid":"MONDO:1012709","xrefs":{"Monarch":{"xref_id":"1012709"}}}


id: PBO:0081598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 519 pseudogene 4","termid":"PBO:0081598"}


id: FYPO:0000341
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a single functional copy of a gene provides sufficient normal function in a diploid cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"haplosufficient","synonyms":[{"name":"haplosufficient during mitotic cell cycle","type":"related"},{"name":"haplosufficient during vegetative growth","type":"exact"}],"termid":"FYPO:0000341"}


id: GO:0170067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of arginine (2-amino-5-guanidinopentanoic acid) via the intermediate compound N-acetyl-L-citrulline.","definition_xrefs":["PMID:16585758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arginine biosynthetic process","termid":"GO:0006526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-arginine biosynthetic process via N-acetyl-L-citrulline","secondary_identifiers":["MetaCyc:PWY-5154"],"synonyms":[{"name":"arginine biosynthesis via N-acetyl intermediates","type":"exact"},{"name":"arginine biosynthesis, N-acetylated pathway","type":"exact"}],"termid":"GO:0170067"}


id: PBO:0059329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S5 pseudogene 3","termid":"PBO:0059329"}


id: PBO:0053481
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 456","termid":"PBO:0053481"}


id: GO:0075285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of multicellular or syncytial spore via septations derived from meiosis. A multicellular or syncytial spore is a structure that can be used for dissemination, for survival of adverse conditions because of its heat and desiccation resistance, and/or for reproduction.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sexual sporulation","termid":"GO:0034293"},{"relation_name":"is_a","term_name":"sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"sexual sporulation resulting in formation of a multicellular or syncytial spore","termid":"GO:0075285"}


id: MONDO:0100027
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete febrile seizures plus, genetic epilepsy with febrile seizures plus (obsolete MONDO:0100027)","termid":"MONDO:0100027","xrefs":{"Monarch":{"xref_id":"0100027"}}}


id: PBO:0079325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 13C","termid":"PBO:0079325"}


id: GO:0019416
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of thiosulfate to tetrathionate, using cytochrome c as an electron acceptor.","definition_xrefs":["MetaCyc:THIOSULFOX-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0008150"],"is_obsolete":false,"name":"polythionate oxidation","termid":"GO:0019416"}


id: GO:0080094
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a trehalose-6-phosphate stimulus.","definition_xrefs":["PMID:19193861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to trehalose-6-phosphate","synonyms":[{"name":"response to trehalose-6-phosphate stimulus","type":"exact"}],"termid":"GO:0080094"}


id: MOD:00892
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to D-serine.","definition_xrefs":["PubMed:6893271","RESID:AA0195#CYS","PubMed:18025465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"D-serine","termid":"MOD:00891"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"D-serine (Cys)","synonyms":[{"name":"(R)-2-amino-3-hydroxypropanoic acid","type":"exact"},{"name":"D-serine","type":"exact"},{"name":"MOD_RES D-serine (Cys)","type":"exact"}],"termid":"MOD:00892"}


id: FYPO:0005752
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more 2'-deoxyribonucleoside triphosphates (dNTPs) measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular dNTP level","synonyms":[{"name":"increased cellular dNTP level during mitotic cell cycle","type":"related"},{"name":"increased cellular dNTP level during vegetative growth","type":"exact"},{"name":"increased dNTP accumulation","type":"related"}],"termid":"FYPO:0005752"}


id: GO:1905166
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of lysosomal protein catabolic process.","definition_xrefs":["GOC:bf","GOC:TermGenie","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process in the vacuole","termid":"GO:1904351"},{"relation_name":"is_a","term_name":"regulation of lysosomal protein catabolic process","termid":"GO:1905165"},{"relation_name":"negatively_regulates","term_name":"lysosomal protein catabolic process","termid":"GO:1905146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of lysosomal protein catabolic process","synonyms":[{"name":"down regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"down regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"down regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"down regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"down regulation of lysosomal protein catabolic process","type":"exact"},{"name":"down regulation of lysosomal protein catabolism","type":"exact"},{"name":"down regulation of lysosomal protein degradation","type":"exact"},{"name":"down regulation of lysosomal proteolysis","type":"related"},{"name":"down regulation of proteolysis within lysosome","type":"related"},{"name":"down-regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"down-regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"down-regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"down-regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"down-regulation of lysosomal protein catabolic process","type":"exact"},{"name":"down-regulation of lysosomal protein catabolism","type":"exact"},{"name":"down-regulation of lysosomal protein degradation","type":"exact"},{"name":"down-regulation of lysosomal proteolysis","type":"related"},{"name":"down-regulation of proteolysis within lysosome","type":"related"},{"name":"downregulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"downregulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"downregulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"downregulation of cellular protein degradation in lysosome","type":"exact"},{"name":"downregulation of lysosomal protein catabolic process","type":"exact"},{"name":"downregulation of lysosomal protein catabolism","type":"exact"},{"name":"downregulation of lysosomal protein degradation","type":"exact"},{"name":"downregulation of lysosomal proteolysis","type":"related"},{"name":"downregulation of proteolysis within lysosome","type":"related"},{"name":"inhibition of cellular protein breakdown in lysosome","type":"narrow"},{"name":"inhibition of cellular protein catabolic process in lysosome","type":"narrow"},{"name":"inhibition of cellular protein catabolism in lysosome","type":"narrow"},{"name":"inhibition of cellular protein degradation in lysosome","type":"narrow"},{"name":"inhibition of lysosomal protein catabolic process","type":"narrow"},{"name":"inhibition of lysosomal protein catabolism","type":"narrow"},{"name":"inhibition of lysosomal protein degradation","type":"narrow"},{"name":"inhibition of lysosomal proteolysis","type":"related"},{"name":"inhibition of proteolysis within lysosome","type":"related"},{"name":"negative regulation of cellular protein breakdown in lysosome","type":"exact"},{"name":"negative regulation of cellular protein catabolic process in lysosome","type":"exact"},{"name":"negative regulation of cellular protein catabolism in lysosome","type":"exact"},{"name":"negative regulation of cellular protein degradation in lysosome","type":"exact"},{"name":"negative regulation of lysosomal protein catabolism","type":"exact"},{"name":"negative regulation of lysosomal protein degradation","type":"exact"},{"name":"negative regulation of lysosomal proteolysis","type":"related"},{"name":"negative regulation of proteolysis within lysosome","type":"related"}],"termid":"GO:1905166"}


id: MONDO:1010882
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lysosomal storage disease in springboks. There is a buildup of GM2 gangliosides in tissues due to the lack of the enzyme hexosaminidase.","definition_xrefs":["PMID:25232033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gangliosidosis, non-human animal","termid":"MONDO:1010167"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GM2 gangliosidosis, springbok","secondary_identifiers":["OMIA:001462-59523"],"synonyms":[{"name":"gangliosidosis, GM2, type II (Sandhoff or variant 0), springbok","type":"related"}],"termid":"MONDO:1010882","xrefs":{"Monarch":{"xref_id":"1010882"}}}


id: MONDO:0001789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurofibroma that arises from the spinal cord.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"spinal cord cancer","termid":"MONDO:0003544"},{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"},{"relation_name":"is_a","term_name":"spinal cord neoplasm","termid":"MONDO:0021234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibroma of spinal cord","secondary_identifiers":["DOID:13742","NCIT:C5145","UMLS:C1336047","MEDGEN:234804"],"synonyms":[{"name":"neurofibroma of spinal cord","type":"exact"},{"name":"spinal cord neurofibroma","type":"exact"}],"termid":"MONDO:0001789","xrefs":{"Monarch":{"xref_id":"0001789"}}}


id: FYPO:0008192
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to pericentric heterochromatin is increased during prophase of the first meiotic nuclear division.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to heterochromatin during meiosis","termid":"FYPO:0004717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to pericentric heterochromatin during meiotic prophase I","termid":"FYPO:0008192"}


id: GO:0103068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: leukotriene C4 + a standard alpha amino acid = leukotriene D4 + an (gamma-L-glutamyl)-L-amino acid.","definition_xrefs":["PMID:1676842","GOC:pz","PMID:9139674"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyltransferase activity","termid":"GO:0016755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016746","GO:0016740"],"is_obsolete":false,"name":"leukotriene C4 gamma-glutamyl transferase activity","secondary_identifiers":["EC:2.3.2.2","MetaCyc:RXN66-336"],"termid":"GO:0103068"}


id: GO:0052883
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-tyrosine = NH4 + trans-4-coumarate.","definition_xrefs":["RHEA:24906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyrosine ammonia-lyase activity","secondary_identifiers":["EC:4.3.1.23"],"synonyms":[{"name":"L-tyrosine ammonia-lyase activity","type":"related"},{"name":"TAL activity","type":"broad"},{"name":"tyrase activity","type":"broad"}],"termid":"GO:0052883"}


id: PBO:0036023
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_trimethylation_during_vegetative_growth","termid":"PBO:0036023"}


id: PBO:0001557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan synthase (predicted)","termid":"PBO:0001557"}


id: PBO:0002304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"P-TEFb-associated cyclin-dependent protein kinase Lsk1","termid":"PBO:0002304"}


id: PBO:0028626
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_shmoo_tip","termid":"PBO:0028626"}


id: MONDO:0018906
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Follicular lymphoma is a form of non-Hodgkin lymphoma characterized by a proliferation of B cells whose nodular structure of follicular architecture is preserved.","definition_xrefs":["Orphanet:545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of mature B-cells","termid":"MONDO:0004949"},{"relation_name":"is_a","term_name":"indolent B-cell non-Hodgkin lymphoma","termid":"MONDO:0017594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"follicular lymphoma","secondary_identifiers":["MEDGEN:7417","MESH:D008224","DOID:0050873","HGNC:990","NCIT:C3209","NORD:1983","ONCOTREE:FL","SCTID:308121000","UMLS:C0024301","GARD:2356","ICD10CM:C82","ICD10WHO:C82","icd11.foundation:797822185","ICDO:9690/3"],"synonyms":[{"name":"follicle center lymphoma","type":"exact"},{"name":"follicle centre lymphoma","type":"exact"},{"name":"follicular center cell lymphoma","type":"exact"},{"name":"follicular centre cell lymphoma","type":"exact"},{"name":"follicular non-Hodgkin lymphoma","type":"exact"},{"name":"follicular non-Hodgkin's lymphoma","type":"exact"},{"name":"lymphoma, follicular","type":"related"},{"name":"lymphoma, follicular center cell","type":"exact"},{"name":"lymphoma, follicular centre cell","type":"exact"},{"name":"lymphoma, follicular, malignant","type":"exact"}],"termid":"MONDO:0018906","xrefs":{"Monarch":{"xref_id":"0018906"}}}


id: MONDO:0008940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endosteal sclerosis-cerebellar hypoplasia syndrome (obsolete MONDO:0008940)","termid":"MONDO:0008940","xrefs":{"Monarch":{"xref_id":"0008940"}}}


id: PBO:0079161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 19","termid":"PBO:0079161"}


id: GO:0004830
data:
  {"annotated_genes":["SJAG_04840","SJAG_01522"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71961,73232],"is_not":false,"summary":null,"term":"GO:0004830"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-tryptophan + tRNA(Trp) = AMP + diphosphate + L-tryptophanyl-tRNA(Trp).","definition_xrefs":["EC:6.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01522":null,"SJAG_04840":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140101","GO:0003824","GO:0003674","GO:0016874","GO:0140098"],"is_obsolete":false,"name":"tryptophan-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:24080","Reactome:R-HSA-379977","MetaCyc:TRYPTOPHAN--TRNA-LIGASE-RXN","Reactome:R-HSA-380222"],"synonyms":[{"name":"L-tryptophan-tRNA(Trp) ligase (AMP-forming) activity","type":"related"},{"name":"L-tryptophan-tRNATrp ligase (AMP-forming)","type":"related"},{"name":"L-tryptophan:tRNATrp ligase (AMP-forming)","type":"related"},{"name":"TrpRS activity","type":"related"},{"name":"tryptophan translase activity","type":"related"},{"name":"tryptophanyl ribonucleic synthetase activity","type":"related"},{"name":"tryptophanyl-tRNA synthase activity","type":"related"},{"name":"tryptophanyl-tRNA synthetase activity","type":"exact"},{"name":"tryptophanyl-transfer RNA synthetase activity","type":"related"},{"name":"tryptophanyl-transfer ribonucleate synthetase activity","type":"related"},{"name":"tryptophanyl-transfer ribonucleic acid synthetase activity","type":"related"},{"name":"tryptophanyl-transfer ribonucleic synthetase activity","type":"related"}],"termid":"GO:0004830","terms_by_termid":{"GO:0004830":null}}


id: GO:0052595
data:
  {"annotated_genes":["SJAG_02496"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043799"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: an aliphatic amine + H2O + O2 = an aldehyde + NH3 + hydrogen peroxide + H+.","definition_xrefs":["MetaCyc:AMINEOXID-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor","termid":"GO:0016641"},{"relation_name":"is_a","term_name":"aliphatic amine dehydrogenase activity","termid":"GO:0030058"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"aliphatic amine oxidase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"aliphatic-amine oxidase activity","type":"exact"},{"name":"aliphatic-amine:oxygen oxidoreductase(deaminating) activity","type":"exact"}],"termid":"GO:0052595","terms_by_termid":{"GO:0043799":null}}


id: PBO:0050399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein C like 4","termid":"PBO:0050399"}


id: PBO:0121139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDON pseudogene 2","termid":"PBO:0121139"}


id: FYPO:0004876
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) is decreased when the cell is subject to heat shock, at specific genes that are transcriptionally up-regulated during the heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased chromatin binding","termid":"FYPO:0002577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000652"],"is_obsolete":false,"name":"decreased chromatin binding at heat-shock-inducible genes during cellular response to heat shock","synonyms":[{"name":"decreased chromatin binding at heat shock inducible genes during cellular response to heat shock","type":"exact"},{"name":"reduced chromatin binding at heat-shock-inducible genes during cellular response to heat shock","type":"exact"}],"termid":"FYPO:0004876"}


id: PBO:0070817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 47","termid":"PBO:0070817"}


id: PBO:0069849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1135, pseudogene","termid":"PBO:0069849"}


id: PBO:0091621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane arginine/lysine amino acid transmembrane transporter Cat1","termid":"PBO:0091621"}


id: MONDO:0010485
data:
  {"annotated_genes":["SJAG_03603"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87234],"is_not":false,"summary":null,"term":"MONDO:0010485"}]},"cv_name":"mondo","definition":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome is a rare syndromic microphthalmia disorder characterized by microphthalmia with coloboma (which may involve the iris, cilary body, choroid, retina and/or optic nerve), microcephaly, short stature and intellectual disability. Other eye abnormalities such as pendular nystagmus, esotropia and ptosis may also be present. Additional associated abnormalities include kyphoscoliosis, anteverted pinnae with minimal convolutions, diastema of the incisors and congenital pes varus.","definition_xrefs":["Orphanet:431140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked colobomatous microphthalmia-microcephaly-intellectual disability-short stature syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111811","MEDGEN:813072","GARD:17709","OMIM:300915","UMLS:C3806742"],"synonyms":[{"name":"MCOPS13","type":"related"},{"name":"Maine microphthalmos","type":"related"},{"name":"X-linked colobomatous microphthalmia-microcephaly-short stature-psychomotor retardation syndrome","type":"exact"},{"name":"colobomatous microphthalmia with microcephaly, short stature, and psychomotor retardation","type":"related"},{"name":"microphthalmia, syndromic 13","type":"related"},{"name":"microphthalmia, syndromic type 13","type":"exact"}],"termid":"MONDO:0010485","terms_by_termid":{"MONDO:0010485":null},"xrefs":{"Monarch":{"xref_id":"0010485"}}}


id: PBO:0041254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 185","termid":"PBO:0041254"}


id: PBO:0039615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annexin A2 pseudogene 2","termid":"PBO:0039615"}


id: PBO:0044223
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cortexin 3","termid":"PBO:0044223"}


id: MONDO:0021253
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the gall bladder.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hepatobiliary neoplasm","termid":"MONDO:0002514"},{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"gallbladder neoplasm","secondary_identifiers":["MEDGEN:42134","MESH:D005706","UMLS:C0016978","EFO:0004606","NCIT:C3048"],"synonyms":[{"name":"gall bladder neoplasm","type":"exact"},{"name":"gall bladder neoplasm (disease)","type":"exact"},{"name":"gall bladder tumor","type":"exact"},{"name":"gall bladder tumour","type":"exact"},{"name":"gallbladder tumor","type":"exact"},{"name":"gallbladder tumour","type":"exact"},{"name":"neoplasm of gall bladder","type":"exact"},{"name":"neoplasm of gallbladder","type":"exact"},{"name":"neoplasm of the gallbladder","type":"exact"},{"name":"tumor of gall bladder","type":"exact"},{"name":"tumor of gallbladder","type":"exact"},{"name":"tumor of the gallbladder","type":"exact"},{"name":"tumour of gall bladder","type":"exact"},{"name":"tumour of gallbladder","type":"exact"},{"name":"tumour of the gallbladder","type":"exact"}],"termid":"MONDO:0021253","xrefs":{"Monarch":{"xref_id":"0021253"}}}


id: GO:0045977
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progression through the embryonic mitotic cell cycle.","definition_xrefs":["GOC:dph","GOC:tb","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle, embryonic","termid":"GO:0009794"},{"relation_name":"is_a","term_name":"positive regulation of mitotic cell cycle","termid":"GO:0045931"},{"relation_name":"positively_regulates","term_name":"mitotic cell cycle, embryonic","termid":"GO:0045448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic cell cycle, embryonic","synonyms":[{"name":"activation of mitotic cell cycle, embryonic","type":"narrow"},{"name":"positive regulation of embryonic mitotic cell cycle","type":"exact"},{"name":"positive regulation of embryonic mitotic cell cycle progression","type":"exact"},{"name":"positive regulation of progression through embryonic mitotic cell cycle","type":"exact"},{"name":"stimulation of mitotic cell cycle, embryonic","type":"narrow"},{"name":"up regulation of mitotic cell cycle, embryonic","type":"exact"},{"name":"up-regulation of mitotic cell cycle, embryonic","type":"exact"},{"name":"upregulation of mitotic cell cycle, embryonic","type":"exact"}],"termid":"GO:0045977"}


id: PR:Q10171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- uch1 gene.","definition_xrefs":["UniProtKB:Q10171","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase Uch1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27F1.03c","synonyms":[{"name":"SPAC27F1.03c","type":"related"},{"name":"Spom972h-uch1","type":"exact"},{"name":"ubiquitin carboxyl-terminal hydrolase 1 (Schizosaccharomyces pombe 972h-)","type":"related"}],"termid":"PR:Q10171"}


id: MONDO:0009591
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Metachromatic leukodystrophy is an inherited condition characterized by the accumulation of fats called sulfatides in cells, especially cells of the nervous system. This accumulation results in progressive destruction of white matter of the brain, which consists of nerve fibers covered by myelin.Affected individuals experience progressive deterioration of intellectual functions and motor skills, such as the ability to walk. They also develop loss of sensation in the extremities, incontinence, seizures, paralysis, inability to speak, blindness, and hearing loss. Eventually they lose awareness of their surroundings and become unresponsive. This condition is inherited in an autosomal recessive pattern and is caused by mutations in the ARSA and PSAP genes.","definition_xrefs":["GARD:0003230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metachromatic leukodystrophy","termid":"MONDO:0018868"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002525","MONDO:0005244","MONDO:0002561","MONDO:0005066","MONDO:0005559","MONDO:0002039"],"is_obsolete":false,"name":"metachromatic leukodystrophy, juvenile form","secondary_identifiers":["NANDO:2201203","SCTID:44359008","GARD:21329","MEDGEN:155528","NANDO:1200080","OMIM:250100","UMLS:C0751276","Orphanet:309263"],"synonyms":[{"name":"ARSA deficiency","type":"related"},{"name":"MLD","type":"related"},{"name":"MLD, juvenile form","type":"exact"},{"name":"Mld","type":"related"},{"name":"arylsulfatase A deficiency","type":"related"},{"name":"arylsulfatase A deficiency, juvenile form","type":"exact"},{"name":"cerebral sclerosis diffuse metachromatic form","type":"related"},{"name":"cerebral sclerosis, diffuse, metachromatic form","type":"related"},{"name":"cerebroside sulfatase deficiency","type":"related"},{"name":"leukodystrophy metachromatic","type":"related"},{"name":"metachromatic leukodystrophy","type":"related"},{"name":"metachromatic leukodystrophy, adult","type":"related"},{"name":"metachromatic leukodystrophy, juvenile","type":"related"},{"name":"metachromatic leukodystrophy, juvenile form","type":"exact"},{"name":"metachromatic leukodystrophy, late infantile","type":"related"},{"name":"metachromatic leukoencephalopathy","type":"related"},{"name":"pseudoarylsulfatase A deficiency","type":"related"},{"name":"sulfatide lipidosis","type":"related"}],"termid":"MONDO:0009591","xrefs":{"Monarch":{"xref_id":"0009591"}}}


id: MOD:00410
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(N-isopropylcarboxamidomethyl)-L-cysteine.","definition_xrefs":["PubMed:11465505","PubMed:8465942","OMSSA:84","Unimod:17#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(N-isopropylcarboxamidomethyl)-L-cysteine","synonyms":[{"name":"N-isopropylcarboxamidomethyl","type":"related"},{"name":"NIPCAM","type":"related"},{"name":"nipcam","type":"exact"}],"termid":"MOD:00410"}


id: PBO:0055830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich colipase like 1","termid":"PBO:0055830"}


id: PR:O74505
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC594.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C594.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC594.02c","synonyms":[{"name":"Spom972h-SPCC594.02c","type":"exact"}],"termid":"PR:O74505"}


id: PBO:0040209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASXL transcriptional regulator 2","termid":"PBO:0040209"}


id: GO:0070533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the BRCA1-BARD1 heterodimer, CtIP and Mre11/Rad50/NBS1 (M/R/N) complex, and binds to DNA at DNA damage sites. BRCA1-C binding ta damaged DNA is required for DNA damage-induced Chk1 phosphorylation and the G2/M transition checkpoint.","definition_xrefs":["PMID:15485915","GOC:mah","PMID:16391231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"BRCA1-C complex","termid":"GO:0070533"}


id: PBO:0043149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 17","termid":"PBO:0043149"}


id: PBO:0073742
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC2A1 divergent transcript","termid":"PBO:0073742"}


id: MONDO:0700188
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Synovial cell sarcoma occurring in a cat.","definition_xrefs":["NCIT:C181658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"},{"relation_name":"is_a","term_name":"feline neoplasm","termid":"MONDO:0700175"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feline synovial cell sarcoma","termid":"MONDO:0700188","xrefs":{"Monarch":{"xref_id":"0700188"}}}


id: PBO:0068802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 39, pseudogene","termid":"PBO:0068802"}


id: PBO:0001106
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by carbon dioxide","termid":"PBO:0001106"}


id: PBO:0047010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A13, pseudogene","termid":"PBO:0047010"}


id: PBO:0085511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S13 and bacterial S15","termid":"PBO:0085511"}


id: PBO:0050805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin","termid":"PBO:0050805"}


id: PBO:0060591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurocalcin delta","termid":"PBO:0060591"}


id: PBO:0110027
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACCSL pseudogene 1","termid":"PBO:0110027"}


id: PBO:0000921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase, TRAMP complex subunit Mtr4","termid":"PBO:0000921"}


id: PBO:0110463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACO2 pseudogene 2","termid":"PBO:0110463"}


id: PBO:0036519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoprotein phosphatase involved in unfolded protein response Dcr2 (predicted)","termid":"PBO:0036519"}


id: PBO:0072227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S20 pseudogene 2","termid":"PBO:0072227"}


id: PBO:0001863
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.1.1.3","termid":"PBO:0001863"}


id: PBO:0061999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily G member 2","termid":"PBO:0061999"}


id: FYPO:0001523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing leptomycin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000257","FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on leptomycin B","synonyms":[{"name":"normal cell population growth in presence of leptomycin B","type":"exact"},{"name":"normal cell population growth on leptomycin B","type":"exact"},{"name":"normal cellular response to leptomycin B","type":"related"},{"name":"normal vegetative cell population growth on leptomycin B","type":"exact"}],"termid":"FYPO:0001523"}


id: GO:1902292
data:
  {"annotated_genes":["SJAG_02908","SJAG_04879","SJAG_01823","SJAG_02074","SJAG_01762","SJAG_01354","SJAG_04995","SJAG_00884","SJAG_02172","SJAG_02607","SJAG_02348","SJAG_03048","SJAG_01210","SJAG_02667","SJAG_04210","SJAG_00399","SJAG_03451","SJAG_02162","SJAG_00857","SJAG_03438","SJAG_03720","SJAG_03160","SJAG_04341","SJAG_03695","SJAG_04671","SJAG_05239","SJAG_00364","SJAG_00874"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109381,111987,115624,117464],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[105337],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[105339,115213,112611,75397,101433,109384,93975,117468,113441,109276,76687,101370,64061,96562,57505,72919,119404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902975"},{"annotations":[104385,110934,99784],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[104974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902315"},{"annotations":[119345,114094],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[91069,104391,108653,118293],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any DNA replication initiation that is involved in cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA replication initiation","termid":"GO:0006270"},{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00399":null,"SJAG_00857":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01210":null,"SJAG_01354":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02162":null,"SJAG_02172":null,"SJAG_02348":null,"SJAG_02607":null,"SJAG_02667":null,"SJAG_02908":null,"SJAG_03048":null,"SJAG_03160":null,"SJAG_03438":null,"SJAG_03451":null,"SJAG_03695":null,"SJAG_03720":null,"SJAG_04210":null,"SJAG_04341":null,"SJAG_04671":null,"SJAG_04879":null,"SJAG_04995":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"cell cycle DNA replication initiation","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"DNA endoreduplication initiation involved in cell cycle DNA replication","type":"narrow"},{"name":"DNA re-replication initiation involved in cell cycle DNA replication","type":"narrow"},{"name":"DNA replication initiation involved in cell cycle DNA replication","type":"exact"},{"name":"DNA-dependent DNA replication initiation involved in cell cycle DNA replication","type":"exact"}],"termid":"GO:1902292","terms_by_termid":{"GO:0140529":null,"GO:0140530":null,"GO:1902315":null,"GO:1902975":null,"GO:1903467":null,"GO:1903468":null,"GO:1904514":null}}


id: GO:0004430
data:
  {"annotated_genes":["SJAG_04537","SJAG_05330","SJAG_01571"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73725,78461,95235],"is_not":false,"summary":null,"term":"GO:0004430"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol + ATP = a 1-phosphatidyl-1D-myo-inositol 4-phosphate + ADP + H+.","definition_xrefs":["EC:2.7.1.67","RHEA:19877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01571":null,"SJAG_04537":null,"SJAG_05330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1675813","KEGG_REACTION:R03361","MetaCyc:1-PHOSPHATIDYLINOSITOL-KINASE-RXN","Reactome:R-HSA-1675780","Reactome:R-HSA-1675974","Reactome:R-HSA-1676185","Reactome:R-HSA-1675883"],"synonyms":[{"name":"PI 4-kinase activity","type":"exact"},{"name":"PI kinase activity","type":"broad"},{"name":"PI4-kinase activity","type":"exact"},{"name":"PI4K","type":"exact"},{"name":"PI4K-alpha activity","type":"exact"},{"name":"PtdIns-4-kinase activity","type":"exact"},{"name":"phosphatidylinositol 4-kinase activity","type":"exact"},{"name":"phosphatidylinositol kinase (phosphorylating) activity","type":"broad"},{"name":"phosphatidylinositol kinase activity","type":"broad"},{"name":"type II phosphatidylinositol kinase activity","type":"related"}],"termid":"GO:0004430","terms_by_termid":{"GO:0004430":null}}


id: PBO:0082086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-phospho-ribosyl-1(alpha)-pyrophosphate synthetase; synthesizes PRPP, which is required for nucleotide, histidine, and tryptophan biosynthesis; one of five related enzymes, which are active as heteromultimeric complexes; PRS2 has a paralog, PRS4, that arose from the whole genome duplication","termid":"PBO:0082086"}


id: PBO:0040191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthetase 1 pseudogene 4","termid":"PBO:0040191"}


id: PBO:0042186
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin B3","termid":"PBO:0042186"}


id: MONDO:1012623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any X-linked tremor that occurs in dogs due to a mutation in the PLP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tremor, dog","termid":"MONDO:1012279"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked canine shaking pup, PLP1-related, dog","secondary_identifiers":["OMIA:000770-9615"],"synonyms":[{"name":"SHP","type":"exact"},{"name":"tremor, X-linked, dog","type":"related"}],"termid":"MONDO:1012623","xrefs":{"Monarch":{"xref_id":"1012623"}}}


id: MONDO:1010490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ventricular septal defect that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular septal defect, non-human animal","termid":"MONDO:1010022"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular septal defect, domestic cat","secondary_identifiers":["OMIA:001041-9685"],"termid":"MONDO:1010490","xrefs":{"Monarch":{"xref_id":"1010490"}}}


id: PBO:0114425
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary microtubule inner protein 7","termid":"PBO:0114425"}


id: PBO:0031523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_DNA-7-methylguanine_glycosylase_activity","termid":"PBO:0031523"}


id: PBO:0059077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myelin oligodendrocyte glycoprotein","termid":"PBO:0059077"}


id: SO:1000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A mutation that changes the amino acid sequence of the peptide in such a way that it changes the 3D structure of the molecule.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000111 sequence_variant_affecting_3D_structure_of_polypeptide (obsolete SO:1000111)","synonyms":[{"name":"mutation affecting 3D structure of polypeptide","type":"related"},{"name":"mutation causing partially characterised 3D structural change","type":"related"},{"name":"mutation causing uncharacterised 3D structural change","type":"related"},{"name":"sequence variant affecting 3D structure of polypeptide","type":"exact"},{"name":"sequence variant affecting 3D-structure of polypeptide","type":"exact"},{"name":"sequence variant causing partially characterised 3D structural change","type":"exact"},{"name":"sequence variant causing uncharacterised 3D structural change","type":"exact"},{"name":"sequence_variant_causing_partially_characterised_3D_structural_change","type":"exact"},{"name":"sequence_variant_causing_uncharacterised_3D_structural_change","type":"exact"}],"termid":"SO:1000111"}


id: PBO:0064289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasminogen like A (pseudogene)","termid":"PBO:0064289"}


id: PATO:0001010
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001010 relative intensity (obsolete PATO:0001010)","termid":"PATO:0001010"}


id: MONDO:0008151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gnathodiaphyseal dysplasia (GDD) is a bone dysplasia characterized by bone fragility, frequent bone fractures at a young age, cemento-osseous lesions of the jaw bones, bowing of tubular bones (tibia and fibula) and diaphyseal sclerosis of long bones associated with generalized osteopenia. GD follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:53697"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with disorganized development of skeletal components (obsolete MONDO:0019708)","termid":"MONDO:0019708"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"gnathodiaphyseal dysplasia","secondary_identifiers":["icd11.foundation:1984860886","OMIM:166260","MEDGEN:331575","UMLS:C1833736","SCTID:715568002","GARD:8698","DOID:0111533","MESH:C536039"],"synonyms":[{"name":"GDD","type":"exact"},{"name":"GNATHODIAPHYSEAL dysplasia","type":"related"},{"name":"Gnathodiaphyseal sclerosis","type":"related"},{"name":"Levin syndrome 2","type":"related"},{"name":"gnathodiaphyseal dysplasia","type":"exact"},{"name":"osteogenesis imperfecta Levin type","type":"related"},{"name":"osteogenesis imperfecta with unusual skeletal lesions","type":"related"}],"termid":"MONDO:0008151","xrefs":{"Monarch":{"xref_id":"0008151"}}}


id: PBO:0047978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member E, pseudogene","termid":"PBO:0047978"}


id: FYPO:0003112
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ubiquitinyl hydrolase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal ubiquitinyl hydrolase activity","termid":"FYPO:0003111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707"],"is_obsolete":false,"name":"increased ubiquitinyl hydrolase activity","termid":"FYPO:0003112"}


id: GO:0001932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of addition of phosphate groups into an amino acid in a protein.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"is_a","term_name":"regulation of phosphorylation","termid":"GO:0042325"},{"relation_name":"regulates","term_name":"protein phosphorylation","termid":"GO:0006468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein phosphorylation","synonyms":[{"name":"regulation of protein amino acid phosphorylation","type":"exact"}],"termid":"GO:0001932"}


id: PBO:0068263
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 45S pre-ribosomal N5","termid":"PBO:0068263"}


id: PBO:0042278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCZ1 homolog, vacuolar protein trafficking and biogenesis associated","termid":"PBO:0042278"}


id: MONDO:0006703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic interstitial cystitis (obsolete MONDO:0006703)","termid":"MONDO:0006703","xrefs":{"Monarch":{"xref_id":"0006703"}}}


id: MONDO:0004947
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of lymphoblasts committed to the B-cell lineage, typically composed of small to medium-sized blast cells. When the neoplasm involves predominantly the bone marrow and the peripheral blood, it is called B acute lymphoblastic leukemia. When it involves nodal or extranodal sites, it is called B lymphoblastic lymphoma. (WHO, 2001)","definition_xrefs":["NCIT:C8936"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute lymphoblastic leukemia","termid":"MONDO:0004967"},{"relation_name":"is_a","term_name":"B-cell non-Hodgkin lymphoma","termid":"MONDO:0015759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-cell acute lymphoblastic leukemia","secondary_identifiers":["EFO:0000094","DOID:0080630","MEDGEN:226949","DOID:7061","UMLS:C1292769","SCTID:277571004"],"synonyms":[{"name":"B lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor B lymphoblastic leukemia/lymphoma","type":"exact"},{"name":"precursor B lymphoblastic lymphoma/leukemia","type":"related"},{"name":"precursor B-lymphoblastic lymphoma/leukemia","type":"exact"}],"termid":"MONDO:0004947","xrefs":{"Monarch":{"xref_id":"0004947"}}}


id: MONDO:0020178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A lentigo that involves the skin of eyelid.","definition_xrefs":["MONDO:patterns/location"],"gene_count":0,"genotype_count":0,"name":"obsolete palpebral lentiginosis (obsolete MONDO:0020178)","secondary_identifiers":["Orphanet:98587"],"synonyms":[{"name":"skin of eyelid lentigo","type":"exact"}],"termid":"MONDO:0020178","xrefs":{"Monarch":{"xref_id":"0020178"}}}


id: GO:1902047
data:
  {"annotated_genes":["SJAG_02344","SJAG_03817","SJAG_02060","SJAG_02125","SJAG_04134","SJAG_02059","SJAG_04469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104618],"is_not":false,"summary":null,"term":"GO:1902047"},{"annotations":[108423],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902267"},{"annotations":[70678,62665,58290,62641,70775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[62640,70774,62664,70677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The process in which a polyamine macromolecule is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyamine transport","termid":"GO:0015846"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_03817":null,"SJAG_04134":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"polyamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:1905122"],"synonyms":[{"name":"polyamine import","type":"related"},{"name":"polyamine uptake","type":"related"}],"termid":"GO:1902047","terms_by_termid":{"GO:1902047":null,"GO:1902267":null,"GO:1903710":null,"GO:1903711":null}}


id: MONDO:1011167
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteochondritis dissecans that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondritis dissecans, non-human animal","termid":"MONDO:1010298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteochondritis dissecans, dog","secondary_identifiers":["OMIA:000748-9615"],"termid":"MONDO:1011167","xrefs":{"Monarch":{"xref_id":"1011167"}}}


id: FYPO:0006683
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at centromere inner repeat regions is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0008070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K9 methylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"normal histone H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere imr during vegetative growth","type":"exact"},{"name":"normal histone H3-K9 methylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"normal histone H3-K9 methylation at centromeric inner repeat region during vegetative growth","type":"exact"},{"name":"normal histone H3K9me at centromere inner repeat during vegetative growth","type":"exact"},{"name":"normal histone lysine H3 K9 methylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0006683"}


id: PBO:0001006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor (predicted)","termid":"PBO:0001006"}


id: GO:1990019
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a protein storage vacuole, a storage vacuole that contains a lytic vacuole.","definition_xrefs":["GOC:tb","PMID:21670741"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein storage vacuole organization","termid":"GO:1990019"}


id: PBO:0073680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sirtuin 2","termid":"PBO:0073680"}


id: PBO:0049962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 8","termid":"PBO:0049962"}


id: PATO:0000505
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A rhythm quality inhering in a bearer by virtue of the bearer's having rhythm.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythm quality","termid":"PATO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhythmic","termid":"PATO:0000505"}


id: MONDO:0006860
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mucoepidermoid tumor (obsolete MONDO:0006860)","termid":"MONDO:0006860","xrefs":{"Monarch":{"xref_id":"0006860"}}}


id: PBO:0041063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRF1 RNA polymerase III transcription initiation factor subunit","termid":"PBO:0041063"}


id: PBO:0114504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe specific protein, GPI anchored","termid":"PBO:0114504"}


id: PBO:0068013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 318","termid":"PBO:0068013"}


id: PBO:0084349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Large subunit of the dynactin complex; dynactin is involved in partitioning the mitotic spindle between mother and daughter cells; putative ortholog of mammalian p150(glued)","termid":"PBO:0084349"}


id: PBO:0066518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ral guanine nucleotide dissociation stimulator like 3","termid":"PBO:0066518"}


id: PBO:0061963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 42","termid":"PBO:0061963"}


id: PBO:0071860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 55","termid":"PBO:0071860"}


id: PBO:0040576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B9 domain containing 1","termid":"PBO:0040576"}


id: MONDO:1010158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, non-human animal","secondary_identifiers":["OMIA:000810"],"termid":"MONDO:1010158","xrefs":{"Monarch":{"xref_id":"1010158"}}}


id: MONDO:0010831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial caudal dysgenesis is a rare, genetic, developmental defect during embryogenesis disorder characterized by varying degrees of caudal dysgenesis, ranging from a single umbilical artery or imperforate anus to full sirenomelia, in several members of the same family. Phenotype includes lumbosacral agenesis, anal atresia or ectopia, genitourinary abnormalities, components of VATER or VACTERL association, and facial dysmorphism (flat facies, abnormal ears, bilateral epicanthic folds, depressed nasal bridge, micrognathia). Additional features reported include cardiovascular (e.g. endocardial cushion defect, hypoplasia of pulmonary artery) and skeletal (kyphosis, hemipelvis) anomalies.","definition_xrefs":["Orphanet:1768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"caudal regression-sirenomelia spectrum","termid":"MONDO:0018639"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial caudal dysgenesis","secondary_identifiers":["GARD:215","OMIM:600145","NCIT:C99054","UMLS:C2931053","MEDGEN:418973","SCTID:722493007"],"synonyms":[{"name":"Rudd-Klimek syndrome","type":"exact"},{"name":"SDAM","type":"related"},{"name":"Sdam","type":"related"},{"name":"caudal dysgenesis familial type","type":"related"},{"name":"caudal dysgenesis syndrome","type":"related"},{"name":"caudal regression","type":"exact"},{"name":"caudal regression syndrome","type":"related"},{"name":"familial caudal dysgenesis","type":"exact"},{"name":"sacral agenesis","type":"related"},{"name":"sacral defect with anterior meningocele","type":"related"},{"name":"sirenomelia","type":"related"}],"termid":"MONDO:0010831","xrefs":{"Monarch":{"xref_id":"0010831"}}}


id: PR:O94676
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar protein 6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR17972:SF0","PRO:DNx","OMA:SCHPO03600"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 22 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC776.08c","secondary_identifiers":["UniProtKB:O94676"],"synonyms":[{"name":"Spom972h-NOL6","type":"exact"},{"name":"U3 snoRNA-associated protein 22 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94676"}


id: PBO:0083833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eukaryotic initiation factor eIF2A; associates specifically with both 40S subunits and 80 S ribosomes, and interacts genetically with both eIF5b and eIF4E; homologous to mammalian eIF2A","termid":"PBO:0083833"}


id: MONDO:0000980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A atherosclerosis that involves the aorta.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atherosclerosis","termid":"MONDO:0005311"},{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aortic atherosclerosis","secondary_identifiers":["HP:0012397","MEDGEN:510061","ICD9:440.0","ICD10CM:I70.0","SCTID:81817003","DOID:10230","UMLS:C0155733"],"synonyms":[{"name":"aorta atherosclerosis","type":"exact"},{"name":"aortic atherosclerosis","type":"exact"},{"name":"aortic atherosclerosis (disease)","type":"exact"},{"name":"atherosclerosis of aorta","type":"exact"}],"termid":"MONDO:0000980","xrefs":{"Monarch":{"xref_id":"0000980"}}}


id: GO:0018186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent linkage of heme to peroxidase.","definition_xrefs":["RESID:AA0280","RESID:AA0279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-heme linkage","termid":"GO:0017003"},{"relation_name":"is_a","term_name":"cytochrome complex assembly","termid":"GO:0017004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0065003","GO:0010467","GO:0044085","GO:0051604","GO:0008150"],"is_obsolete":false,"name":"peroxidase-heme linkage","synonyms":[{"name":"peroxidase-haem linkage","type":"exact"}],"termid":"GO:0018186"}


id: PBO:0077099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 8 homolog B","termid":"PBO:0077099"}


id: GO:0031510
data:
  {"annotated_genes":["SJAG_00604","SJAG_05032"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77508,99766],"is_not":false,"summary":null,"term":"GO:0031510"}]},"cv_name":"cellular_component","definition":"A conserved heterodimeric complex with SUMO activating enzyme activity.","definition_xrefs":["PMID:15601841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"SUMO activating enzyme complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SAE","type":"exact"},{"name":"SUMO E1 activator enzyme complex","type":"exact"}],"termid":"GO:0031510","terms_by_termid":{"GO:0031510":null}}


id: MONDO:0014981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary immunodeficiency disease in which the cause of the disease is a mutation in the BCL11B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 49","secondary_identifiers":["OMIM:617237","MEDGEN:934623","DOID:0111979","UMLS:C4310656"],"synonyms":[{"name":"BCL11B primary immunodeficiency disease","type":"exact"},{"name":"IMD49","type":"exact"},{"name":"SCID, T cell-Negative, B cell-Positive, Nk cell-Positive, with intellectual disability, spasticity, and craniofacial abnormalities","type":"related"},{"name":"immunodeficiency 49","type":"exact"},{"name":"immunodeficiency 49; IMD49","type":"exact"},{"name":"immunodeficiency type 49","type":"exact"},{"name":"primary immunodeficiency disease caused by mutation in BCL11B","type":"exact"},{"name":"severe combined immunodeficiency, T cell-Negative, B cell-Positive, Nk cell-Positive, with intellectual disability, spasticity, and craniofacial abnormalities","type":"related"}],"termid":"MONDO:0014981","xrefs":{"Monarch":{"xref_id":"0014981"}}}


id: GO:0099188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of cytoskeletal structures comprising cytoskeletal filaments and their associated proteins in the postsynaptic cytoskeleton.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoskeleton organization","termid":"GO:0007010"},{"relation_name":"part_of","term_name":"postsynapse organization","termid":"GO:0099173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0007010","GO:0008150"],"is_obsolete":false,"name":"postsynaptic cytoskeleton organization","termid":"GO:0099188"}


id: SO:0001382
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_isopentenylaminomethyl_2prime_O_methyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_isopentenylaminomethyl_two_prime_O_methyluridine","secondary_identifiers":["RNAMOD:105"],"synonyms":[{"name":"5-(isopentenylaminomethyl)- 2'-O-methyluridine","type":"exact"},{"name":"five isopentenylaminomethyl two prime O methyluridine","type":"exact"},{"name":"inm5Um","type":"exact"}],"termid":"SO:0001382"}


id: GO:2000332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of blood microparticle formation.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"blood microparticle formation","termid":"GO:0072564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of blood microparticle formation","synonyms":[{"name":"regulation of microparticle generation","type":"exact"},{"name":"regulation of microparticle release","type":"exact"}],"termid":"GO:2000332"}


id: PBO:0113166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inositol hexakisphosphate (IP6) and inositol heptakisphosphate (IP7) kinase; generation of high energy inositol pyrophosphates by Kcs1p is required for many processes such as vacuolar biogenesis, stress response, RNA polymerase I-mediated rRNA transcription and telomere maintenance; phosphorylated by the AMPK Snf1p, leading to reduced levels of pyrophosphorylated IP7, increased filamentous and invasive growth and increased cell elongation","termid":"PBO:0113166"}


id: FYPO:0002063
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a 3'-5'-exoribonuclease activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal ribonuclease activity","termid":"FYPO:0003821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abnormal 3'-5'-exoribonuclease activity","termid":"FYPO:0002063"}


id: PBO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"genome_org","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"co-transcribed with divergently orientated functionally related gene","termid":"PBO:0000631"}


id: MONDO:0019858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic congenital hypothyroidism is a type of primary congenital hypothyroidism whose cause and prevalence are unknown.","definition_xrefs":["Orphanet:95717"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism","termid":"MONDO:0018612"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"idiopathic congenital hypothyroidism","secondary_identifiers":["GARD:19298","SCTID:717334008","MEDGEN:901252","UMLS:C4273913"],"termid":"MONDO:0019858","xrefs":{"Monarch":{"xref_id":"0019858"}}}


id: SO:0001573
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant whereby an intron is gained by the processed transcript; usually a result of an alteration of the donor or acceptor.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intron_gain_variant","synonyms":[{"name":"included intron","type":"exact"},{"name":"intron gain","type":"exact"},{"name":"intron gain variant","type":"exact"},{"name":"retained intron","type":"exact"}],"termid":"SO:0001573"}


id: MONDO:0035002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete isolated inherited retinal disorder (obsolete MONDO:0035002)","secondary_identifiers":["Orphanet:520817"],"termid":"MONDO:0035002","xrefs":{"Monarch":{"xref_id":"0035002"}}}


id: MONDO:0014666
data:
  {"annotated_genes":["SJAG_01444"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87111],"is_not":false,"summary":null,"term":"MONDO:0014666"}]},"cv_name":"mondo","definition":"Any leukodystrophy in which the cause of the disease is a mutation in the POLR1C gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"POLR1C-related disorder","termid":"MONDO:0700278"},{"relation_name":"is_a","term_name":"POLR3-related leukodystrophy","termid":"MONDO:0700282"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01444":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hypomyelinating leukodystrophy 11","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616494","UMLS:C4225305","DOID:0060792","GARD:18088","MEDGEN:897960"],"synonyms":[{"name":"HLD11","type":"exact"},{"name":"POLR1C leukodystrophy","type":"exact"},{"name":"hypomyelinating leukodystrophy type 11","type":"exact"},{"name":"leukodystrophy caused by mutation in POLR1C","type":"exact"},{"name":"leukodystrophy, hypomyelinating, 11","type":"related"},{"name":"leukodystrophy, hypomyelinating, type 11","type":"exact"}],"termid":"MONDO:0014666","terms_by_termid":{"MONDO:0014666":null},"xrefs":{"Monarch":{"xref_id":"0014666"}}}


id: PBO:0068936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 179, pseudogene","termid":"PBO:0068936"}


id: GO:0050215
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: propane-1,2-diol = H2O + propanal.","definition_xrefs":["EC:4.2.1.28","RHEA:14569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"propanediol dehydratase activity","secondary_identifiers":["KEGG_REACTION:R02376","MetaCyc:PROPANEDIOL-DEHYDRATASE-RXN"],"synonyms":[{"name":"1,2-propanediol dehydratase activity","type":"related"},{"name":"DL-1,2-propanediol hydro-lyase activity","type":"related"},{"name":"adenosylcobalamin-dependent diol dehydratase activity","type":"related"},{"name":"coenzyme B12-dependent diol dehydrase activity","type":"related"},{"name":"diol dehydrase activity","type":"related"},{"name":"diol dehydratase activity","type":"related"},{"name":"dioldehydratase activity","type":"related"},{"name":"meso-2,3-butanediol dehydrase activity","type":"related"},{"name":"propane-1,2-diol hydro-lyase (propanal-forming)","type":"related"},{"name":"propane-1,2-diol hydro-lyase activity","type":"related"},{"name":"propanediol dehydrase activity","type":"related"}],"termid":"GO:0050215"}


id: PBO:0064471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon 2, accessory subunit","termid":"PBO:0064471"}


id: GO:1905834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a pyrimidine ribonucleotide stimulus.","definition_xrefs":["GOC:TermGenie","PMID:22065602","GO_REF:0000071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to organophosphorus","termid":"GO:0046683"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to pyrimidine ribonucleotide","termid":"GO:1905834"}


id: FYPO:0008012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a vegetative cell dies at a level of mechanical stress that wild-type cells can normally withstand.","definition_xrefs":["PMID:34666001","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype","termid":"FYPO:0003755"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"cell sensitive to mechanical stress","termid":"FYPO:0008012"}


id: PBO:0087231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seipin involved in lipid droplet (LD) assembly; controls lipid particle morphology, number, and size; promotes initiation of LD formation on the ER; ensures that LDs bud from the ER towards the cytosolic side of the membrane; forms a complex with Ldb16p at ER-LD contact sites, stabilizing these sites; null mutants have localized accumulation of phosphatidic acid (PA) marker proteins; BSCL2, human homolog implicated in congenital lipodystrophy, complements yeast null mutant","termid":"PBO:0087231"}


id: GO:0030209
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of dermatan sulfate proteoglycans, which consist of a core protein linked to a dermatan sulfate glycosaminoglycan. The dermatan sulfate chain is composed of the repeating disaccharide unit beta-(1,4)-D-hexuronic acid-beta-(1,3)-N-acetyl-D-galactosamine. The former can be a mixture of sulfated and nonsulfated D-glucuronic and L-iduronic acids and the latter can be O-sulfated.","definition_xrefs":["PMID:17239763"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteoglycan catabolic process","termid":"GO:0030167"},{"relation_name":"is_a","term_name":"dermatan sulfate proteoglycan metabolic process","termid":"GO:0050655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"dermatan sulfate proteoglycan catabolic process","synonyms":[{"name":"chondroitin sulfate B catabolic process","type":"exact"},{"name":"chondroitin sulfate B catabolism","type":"exact"},{"name":"dermatan sulfate breakdown","type":"exact"},{"name":"dermatan sulfate catabolism","type":"exact"},{"name":"dermatan sulfate degradation","type":"exact"},{"name":"dermatan sulphate catabolic process","type":"exact"},{"name":"dermatan sulphate catabolism","type":"exact"}],"termid":"GO:0030209"}


id: PBO:0027247
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_polyadenylated_25S_rRNA_level","termid":"PBO:0027247"}


id: PBO:0057497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 615","termid":"PBO:0057497"}


id: MONDO:1010805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polydactyly that occurs in domestic guinea pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polydactyly, non-human animal","termid":"MONDO:1010158"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polydactyly, domestic guinea pig","secondary_identifiers":["OMIA:000810-10141"],"termid":"MONDO:1010805","xrefs":{"Monarch":{"xref_id":"1010805"}}}


id: GO:0042567
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of three proteins, which in animals is approximately 150kDa and consists of the insulin-like growth factor (IGF), the insulin-like growth factor binding protein-3 (IGFBP-3), or -5 (IGFBP-5) and an acid-labile subunit (ALS). The complex plays a role in growth and development.","definition_xrefs":["GOC:jl","PMID:12239079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding protein complex","termid":"GO:0016942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"insulin-like growth factor ternary complex","synonyms":[{"name":"IGF ternary complex","type":"exact"}],"termid":"GO:0042567"}


id: GO:0097545
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cellular anatomical entity that is part of an axoneme consisting of a doublet microtubule.","definition_xrefs":["GOC:cilia","GOC:pr","GOC:krc","PMID:5664206","Wikipedia:Axoneme","PMID:5044758"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal doublet microtubule","synonyms":[{"name":"DMT","type":"related"},{"name":"axonemal outer doublet","type":"exact"},{"name":"axoneme outer doublet","type":"exact"},{"name":"outer doublet","type":"broad"},{"name":"outer-doublet microtubules","type":"related"}],"termid":"GO:0097545"}


id: GO:0060128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized structural and/or functional features of a corticotropic hormone secreting cell. An corticotropic hormone secreting cell is a basophil cell of the anterior pituitary that produces corticotropin.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"adenohypophysis development","termid":"GO:0021984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticotropin hormone secreting cell differentiation","synonyms":[{"name":"adrenocorticotrophic hormone secreting cell differentiation","type":"exact"},{"name":"adrenocorticotropic hormone secreting cell differentiation","type":"exact"},{"name":"corticotrope differentiation","type":"exact"},{"name":"corticotroph differentiation","type":"exact"},{"name":"corticotrophin hormone secreting cell differentiation","type":"related"}],"termid":"GO:0060128"}


id: PBO:0050424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein H1 pseudogene 3","termid":"PBO:0050424"}


id: PBO:0039503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 1","termid":"PBO:0039503"}


id: PBO:0089354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine phosphatase superfamily protein","termid":"PBO:0089354"}


id: PBO:0001659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SM22/transgelin-like actin modulating protein Stg1","termid":"PBO:0001659"}


id: GO:0008662
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + D-fructose 1-phosphate = ADP + D-fructose 1,6-bisphosphate.","definition_xrefs":["EC:2.7.1.56"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphofructokinase activity","termid":"GO:0008443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0016301","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1-phosphofructokinase activity","secondary_identifiers":["RHEA:14213","MetaCyc:1PFRUCTPHOSN-RXN"],"synonyms":[{"name":"1-phosphofructokinase (phosphorylating)","type":"related"},{"name":"ATP:D-fructose-phosphate 6-phosphotransferase activity","type":"related"},{"name":"D-fructose-1-phosphate kinase activity","type":"related"},{"name":"fructose 1-phosphate kinase activity","type":"related"},{"name":"fructose-1-phosphate kinase activity","type":"related"},{"name":"phosphofructokinase 1","type":"related"}],"termid":"GO:0008662"}


id: MONDO:0010968
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital glaucoma","termid":"MONDO:0020366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3, primary infantile, B","secondary_identifiers":["OMIM:600975","UMLS:C1832977","GARD:2490","MEDGEN:331409","MESH:C536824"],"synonyms":[{"name":"GLC3 type B","type":"related"},{"name":"GLC3B","type":"exact"},{"name":"Glc3, type B","type":"related"},{"name":"glaucoma 3 primary infantile B","type":"related"},{"name":"glaucoma 3, primary infantile, B","type":"exact"},{"name":"glaucoma primary congenita type 3B","type":"related"},{"name":"glaucoma, primary congenital, type B","type":"related"},{"name":"primary congenital glaucoma","type":"related"},{"name":"primary congenital glaucoma type 3B","type":"related"}],"termid":"MONDO:0010968","xrefs":{"Monarch":{"xref_id":"0010968"}}}


id: PBO:0058991
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"motilin receptor","termid":"PBO:0058991"}


id: SO:0001928
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A duplication of the distal region of a chromosome.","definition_xrefs":["SO:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"duplication","termid":"SO:1000035"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal_duplication","synonyms":[{"name":"distal duplication","type":"exact"}],"termid":"SO:0001928"}


id: GO:0061118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis","termid":"GO:0050926"},{"relation_name":"regulates","term_name":"chemotaxis to cAMP","termid":"GO:0043327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of positive chemotaxis to cAMP","termid":"GO:0061118"}


id: GO:0090367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the covalent alteration of one or more nucleotides within an mRNA molecule to produce an mRNA molecule with a sequence that differs from that coded genetically.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA modification","termid":"GO:0090365"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA modification","termid":"GO:0016556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016071"],"is_obsolete":false,"name":"negative regulation of mRNA modification","termid":"GO:0090367"}


id: MONDO:0007816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immune suppression (obsolete MONDO:0007816)","secondary_identifiers":["OMIM:146850"],"synonyms":[{"name":"IS","type":"related"},{"name":"Iscw","type":"related"},{"name":"immune suppression","type":"exact"},{"name":"streptococcal cell wall antigen, suppression of immune response to","type":"related"}],"termid":"MONDO:0007816","xrefs":{"Monarch":{"xref_id":"0007816"}}}


id: GO:0033472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-L-galactose, a substance composed of L-galactose in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar biosynthetic process","termid":"GO:0009226"},{"relation_name":"is_a","term_name":"GDP-L-galactose metabolic process","termid":"GO:0033471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GDP-L-galactose biosynthetic process","secondary_identifiers":["MetaCyc:PWY-5115"],"synonyms":[{"name":"GDP-L-galactose anabolism","type":"exact"},{"name":"GDP-L-galactose biosynthesis","type":"exact"},{"name":"GDP-L-galactose formation","type":"exact"},{"name":"GDP-L-galactose synthesis","type":"exact"}],"termid":"GO:0033472"}


id: MONDO:0005764
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm composed of spindle to ovoid cells which have morphologic and immunophenotypic characteristics of follicular dendritic cells. It affects lymph nodes and other sites including the tonsils, gastrointestinal tract, spleen, liver, soft tissues, skin, and oral cavity. It usually behaves as a low grade sarcoma. Treatment options include complete surgical removal of the tumor with or without adjuvant chemotherapy or radiotherapy. Recurrences have been reported in up to half of the cases.","definition_xrefs":["NCIT:C9281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendritic cell sarcoma","termid":"MONDO:0004380"},{"relation_name":"is_a","term_name":"Epstein-Barr virus-associated mesenchymal tumor","termid":"MONDO:0017345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"follicular dendritic cell sarcoma","secondary_identifiers":["ICDO:9758/3","MEDGEN:220355","MESH:D054740","NANDO:2200034","ONCOTREE:FDCS","Orphanet:86902","UMLS:C1260325","icd11.foundation:15445528","DOID:6262","icd11.foundation:149373156","EFO:0007276","GARD:19081","ICDO:9758/1"],"synonyms":[{"name":"follicular Dendritic cell sarcoma","type":"exact"},{"name":"follicular Dendritic cell sarcoma/tumor","type":"exact"},{"name":"follicular dendritic cell sarcoma","type":"exact"},{"name":"follicular dendritic cell tumor","type":"exact"},{"name":"follicular dendritic cell tumour","type":"exact"},{"name":"sarcoma of follicular dendritic cell","type":"exact"}],"termid":"MONDO:0005764","xrefs":{"Monarch":{"xref_id":"0005764"}}}


id: GO:0009906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a blue light photoperiod stimulus. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm.","definition_xrefs":["GOC:mtg_far_red","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"},{"relation_name":"is_a","term_name":"photoperiodism","termid":"GO:0009648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to photoperiod, blue light","termid":"GO:0009906"}


id: PBO:0087004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho GTPase activating protein (RhoGAP); involved in control of the cytoskeleton organization; targets the essential Rho-GTPase Cdc42p, which controls establishment and maintenance of cell polarity, including bud-site assembly","termid":"PBO:0087004"}


id: MONDO:0004594
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pulmonary embolism","termid":"MONDO:0005279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"puerperal pulmonary embolism","secondary_identifiers":["MEDGEN:510381","ICD9:673.80","SCTID:200284000","DOID:8512","ICD9:673","ICD9:673.81","UMLS:C0157540"],"termid":"MONDO:0004594","xrefs":{"Monarch":{"xref_id":"0004594"}}}


id: PBO:0114535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PX/PXA domain protein, implicated in membrane organization or lipid metabolism","termid":"PBO:0114535"}


id: MONDO:0016969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome 19","termid":"MONDO:0016937"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome 19","secondary_identifiers":["MESH:C538311","Orphanet:262986","icd11.foundation:1595108486","MEDGEN:162782","UMLS:C0795871","GARD:20889"],"synonyms":[{"name":"19q duplication","type":"related"},{"name":"19q trisomy","type":"related"},{"name":"Duplication 19q","type":"related"},{"name":"chromosome 19q duplication","type":"related"},{"name":"partial duplication of chromosome 19q","type":"exact"},{"name":"partial duplication of the long arm of chromosome type 19","type":"exact"},{"name":"partial trisomy 19q","type":"related"},{"name":"partial trisomy of chromosome 19q","type":"exact"},{"name":"partial trisomy of the long arm of chromosome 19","type":"exact"},{"name":"trisomy 19q","type":"related"}],"termid":"MONDO:0016969","xrefs":{"Monarch":{"xref_id":"0016969"}}}


id: FYPO:0006072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the addition of one or more uridylyl residues to the 3' end of a small RNA (sRNA) molecule does not occur.","definition_xrefs":["PomBase:mah","PMID:28541282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal RNA processing","termid":"FYPO:0001553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000294","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"abolished small RNA 3' uridylation","synonyms":[{"name":"abolished sRNA 3' uridylation","type":"exact"},{"name":"abolished small RNA 3' uridylation during mitotic cell cycle","type":"related"},{"name":"abolished small RNA 3' uridylation during vegetative growth","type":"exact"},{"name":"abolished small regulatory RNA 3' uridylation","type":"exact"},{"name":"small RNA 3' uridylation abolished","type":"exact"}],"termid":"FYPO:0006072"}


id: PR:Q9P775
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A periodic tryptophan protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03159","PANTHER:PTHR14091:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized WD repeat-containing protein C17D11.16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1711.16","secondary_identifiers":["UniProtKB:Q9P775"],"synonyms":[{"name":"Spom972h-PWP1","type":"exact"}],"termid":"PR:Q9P775"}


id: PBO:0027081
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_oxidation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0027081"}


id: MONDO:0010016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any sclerosteosis in which the cause of the disease is a mutation in the SOST gene.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sclerosteosis","termid":"MONDO:0017838"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sclerosteosis 1","secondary_identifiers":["DOID:0060756","OMIM:269500","UMLS:C4551483","MEDGEN:1642815","GARD:15233"],"synonyms":[{"name":"SOST","type":"related"},{"name":"SOST sclerosteosis","type":"exact"},{"name":"SOST1","type":"exact"},{"name":"cortical hyperostosis with syndactyly","type":"related"},{"name":"sclerosteosis 1","type":"exact"},{"name":"sclerosteosis caused by mutation in SOST","type":"exact"},{"name":"sclerosteosis type 1","type":"exact"}],"termid":"MONDO:0010016","xrefs":{"Monarch":{"xref_id":"0010016"}}}


id: PATO:0002262
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a protein or a molecule by virtue of the addition of a phosphate (PO4) group to the bearer.","direct_ancestors":[{"relation_name":"is_a","term_name":"molecular quality","termid":"PATO:0002182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylation","termid":"PATO:0002262"}


id: PBO:0077349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 88B","termid":"PBO:0077349"}


id: PBO:0086933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles","termid":"PBO:0086933"}


id: PBO:0004201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"origin recognition complex subunit Orc2","termid":"PBO:0004201"}


id: PBO:0086516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved across S. cerevisiae strains; not conserved in closely related Saccharomyces species; multicopy suppressor of glucose transport defects, likely due to the presence of an HXT4 regulatory element in the region","termid":"PBO:0086516"}


id: PBO:0001501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P subunit (predicted)","termid":"PBO:0001501"}


id: GO:0000484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Endonucleolytic cleavage between the SSU-rRNA and the 5.8S rRNA of an rRNA molecule originally produced as a tetracistronic rRNA transcript that contained the Small SubUnit (SSU) rRNA, the 5.8S rRNA, 2S rRNA, and the Large SubUnit (LSU) rRNA, in that order, from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000483"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000474"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0010467","GO:0042254","GO:0008150"],"is_obsolete":false,"name":"cleavage between SSU-rRNA and 5.8S rRNA of tetracistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, 2S rRNA, LSU-rRNA)","termid":"GO:0000484"}


id: FYPO:0002296
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A colony morphology phenotype in which the colony spreads laterally to a lesser extent, and grows vertically to a greater extent, resulting in a more conical shape, than a wild-type colony.","definition_xrefs":["PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal colony morphology","termid":"FYPO:0000150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"cone-shaped colony morphology","synonyms":[{"name":"piled-up colony morphology","type":"exact"}],"termid":"FYPO:0002296"}


id: MONDO:0010502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any X-linked syndromic intellectual disability in which the cause of the disease is a mutation in the USP9X gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 99, syndromic, female-restricted","secondary_identifiers":["UMLS:C4225416","DOID:0112025","MEDGEN:899839","OMIM:300968"],"synonyms":[{"name":"MRXS99F","type":"exact"},{"name":"USP9X X-linked syndromic intellectual disability","type":"exact"},{"name":"X-linked syndromic intellectual disability caused by mutation in USP9X","type":"exact"},{"name":"intellectual developmental disorder, X-linked 99, syndromic, female-restricted, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 99, syndromic, female-restricted","type":"exact"},{"name":"mental retardation, X-linked 99, syndromic, female-restricted","type":"exact"}],"termid":"MONDO:0010502","xrefs":{"Monarch":{"xref_id":"0010502"}}}


id: PBO:0015250
data:
  {"annotation_feature_type":"gene","cv_name":"ex_tools","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pat1-as2 allele undergoes synchronous meiosis at 25 degrees C in presence of ATP analog","termid":"PBO:0015250"}


id: MONDO:0018721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare combined vascular malformation (obsolete MONDO:0018721)","secondary_identifiers":["Orphanet:458837"],"termid":"MONDO:0018721","xrefs":{"Monarch":{"xref_id":"0018721"}}}


id: FYPO:0005233
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of one protein to an MCM complex is normal (i.e. indistinguishable from wild type). The protein whose binding to the MCM complex is assayed may be encoded by the mutated gene, or may be encoded by a different gene.","definition_xrefs":["PomBase:mah","PMID:12604790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex binding","termid":"FYPO:0005232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000702"}],"interesting_parent_ids":["FYPO:0000702","FYPO:0000257","FYPO:0000652"],"is_obsolete":false,"name":"normal MCM complex binding","termid":"FYPO:0005233"}


id: MONDO:0100335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to a local anesthetic.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"local anesthetic poisoning","synonyms":[{"name":"local anesthetic poisoning","type":"exact"}],"termid":"MONDO:0100335","xrefs":{"Monarch":{"xref_id":"0100335"}}}


id: FYPO:0005998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any small nucleolar RNA (snoRNA) primary transcript, snoRNA precursor or processing intermediate, or mature snoRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"altered snoRNA or precursor level","synonyms":[{"name":"abnormal snoRNA or precursor level","type":"exact"},{"name":"altered snoRNA or precursor accumulation","type":"related"},{"name":"altered snoRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered snoRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered snoRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005998"}


id: MONDO:0009454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency-centromeric instability-facial anomalies syndrome in which the cause of the disease is a mutation in the DNMT3B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency-centromeric instability-facial anomalies syndrome","termid":"MONDO:0000133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0019303"],"is_obsolete":false,"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 1","secondary_identifiers":["MEDGEN:1636193","GARD:15188","OMIM:242860","UMLS:C4551557","NCIT:C156430","DOID:0090008"],"synonyms":[{"name":"DNMT3B immunodeficiency-centromeric instability-facial anomalies syndrome","type":"exact"},{"name":"ICF syndrome 1","type":"exact"},{"name":"ICF1","type":"related"},{"name":"centromeric instability, immunodeficiency syndrome","type":"related"},{"name":"immune deficiency, variable, with centromeric instability of chromosomes 1, 9, and 16","type":"related"},{"name":"immunodeficiency syndrome, variable","type":"related"},{"name":"immunodeficiency-centromeric instability-Facial anomalies syndrome type 1","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome 1","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome caused by mutation in DNMT3B","type":"exact"},{"name":"immunodeficiency-centromeric instability-facial anomalies syndrome type 1","type":"exact"}],"termid":"MONDO:0009454","xrefs":{"Monarch":{"xref_id":"0009454"}}}


id: MONDO:0013107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing atopic dermatitis that is associated with variation in the region 11q13.5.","definition_xrefs":["DOID:0110103","MONDO:patterns/inherited_susceptibility","PMID:19349984"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"atopic eczema","termid":"MONDO:0004980"},{"relation_name":"is_a","term_name":"dermatitis, atopic, susceptibility to","termid":"MONDO:0100178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatitis, atopic, 7","secondary_identifiers":["MESH:C567796","OMIM:613064","MEDGEN:414058","UMLS:C2751599"],"synonyms":[{"name":"ATOD7","type":"exact"},{"name":"atopic dermatitis 7","type":"exact"},{"name":"atopic dermatitis type 7","type":"exact"},{"name":"dermatitis, ATOPIC, 7","type":"related"},{"name":"dermatitis, atopic, susceptibility to, 7","type":"exact"}],"termid":"MONDO:0013107","xrefs":{"Monarch":{"xref_id":"0013107"}}}


id: GO:0008996
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of single-stranded RNA that is monophosphorylated at its 5'-end; cleavage occurs predominantly at positions 5 and 6 nucleotides from the 5'-end and in A + U-rich regions, and is blocked by the presence of a 5'-triphosphate group.","definition_xrefs":["PMID:10722715","PMID:16854990"],"gene_count":0,"genotype_count":0,"name":"obsolete ribonuclease G activity (obsolete GO:0008996)","termid":"GO:0008996"}


id: FYPO:0006851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of one or more meiotic cell cycle phases is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased duration of cell cycle phase","termid":"FYPO:0000410"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle phase","termid":"FYPO:0002738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"decreased duration of meiotic cell cycle phase","synonyms":[{"name":"reduced duration of meiotic cell cycle phase","type":"exact"}],"termid":"FYPO:0006851"}


id: PBO:0046893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 13 member C","termid":"PBO:0046893"}


id: MONDO:0044206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"otospondylomegaepiphyseal dysplasia","termid":"MONDO:0008975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"otospondylomegaepiphyseal dysplasia, autosomal recessive","secondary_identifiers":["OMIM:215150","MEDGEN:1790497","UMLS:C5551484"],"synonyms":[{"name":"Nance-Insley syndrome","type":"related"},{"name":"Nance-Sweeney chondrodysplasia","type":"related"},{"name":"OSMED","type":"related"},{"name":"OSMEDB","type":"related"},{"name":"Weissenbacher-Zweymuller syndrome","type":"related"},{"name":"Weissenbacher-Zweymuller syndrome, formerly","type":"related"},{"name":"chondrodystrophy with sensorineural deafness","type":"related"},{"name":"otospondylomegaepiphyseal dysplasia, autosomal recessive","type":"exact"}],"termid":"MONDO:0044206","xrefs":{"Monarch":{"xref_id":"0044206"}}}


id: GO:0052712
data:
  {"annotated_genes":["SJAG_01219"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[110863],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0052714"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: inositol phosphosphingolipid + H2O = sphingolipid + phosphorylinositol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipase C activity","termid":"GO:0004629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01219":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol phosphosphingolipid phospholipase activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0052712","terms_by_termid":{"GO:0052714":null}}


id: MONDO:0004212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rapidly growing squamous cell carcinoma that arises from the vulva. It is self-limited and is characterized by the presence of a central crater that contains squamous cells. The proliferating squamous cells infiltrate the dermis below and produce keratin masses that are pushed towards the surface of the tumor.","definition_xrefs":["NCIT:C40288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar squamous cell carcinoma","termid":"MONDO:0024609"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar keratoacanthoma-like carcinoma","secondary_identifiers":["DOID:7408"],"synonyms":[{"name":"vulvar squamous cell carcinoma, keratoacanthoma type","type":"exact"}],"termid":"MONDO:0004212","xrefs":{"Monarch":{"xref_id":"0004212"}}}


id: PBO:0027860
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_cellular_response_to_DNA_damage","termid":"PBO:0027860"}


id: PBO:0000719
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyotrophic lateral sclerosis","termid":"PBO:0000719"}


id: PBO:0056149
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mab-21 like 4","termid":"PBO:0056149"}


id: GO:0000467
data:
  {"annotated_genes":["SJAG_04824","SJAG_04369","SJAG_04818","SJAG_01818","SJAG_04153","SJAG_01191","SJAG_02993","SJAG_03745","SJAG_01521","SJAG_04084","SJAG_04321","SJAG_00854","SJAG_04006","SJAG_00081","SJAG_03179"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72582,73280,73572,74397,77032,79635,81396,91988,99249,100955,104097,108495,109489,117504,117943],"is_not":false,"summary":null,"term":"GO:0000467"}]},"cv_name":"biological_process","definition":"Exonucleolytic digestion of a pre-rRNA molecule to generate the mature 3'-end of a 5.8S rRNA molecule derived from an originally tricistronic pre-rRNA transcript that contained the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript.","definition_xrefs":["PMID:10690410","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA 3'-end processing","termid":"GO:0031125"},{"relation_name":"part_of","term_name":"maturation of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000466"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00081":null,"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_02993":null,"SJAG_03179":null,"SJAG_03745":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04369":null,"SJAG_04818":null,"SJAG_04824":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0042254","GO:0010467"],"is_obsolete":false,"name":"exonucleolytic trimming to generate mature 3'-end of 5.8S rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000467","terms_by_termid":{"GO:0000467":null}}


id: PBO:0046366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 3","termid":"PBO:0046366"}


id: PBO:0050671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 6","termid":"PBO:0050671"}


id: GO:0015334
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of oligopeptide from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations. Oligopeptides are molecules that contain a small number (2 to 20) of amino-acid residues connected by peptide linkages.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligopeptide transmembrane transporter activity","termid":"GO:0035673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity oligopeptide transmembrane transporter activity","synonyms":[{"name":"high affinity oligopeptide transporter activity","type":"exact"},{"name":"high-affinity oligopeptide transporter activity","type":"related"}],"termid":"GO:0015334"}


id: GO:0160111
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A structural network of microtubule inner proteins (MIPs) located inside the lumen of the A tubule of the axonemal microtubule doublet that helps stabilize the A tubule.","definition_xrefs":["PMID:29430673","PMID:37295417","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"A axonemal microtubule","termid":"GO:0097649"},{"relation_name":"part_of","term_name":"axonemal microtubule doublet inner sheath","termid":"GO:0160110"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"axonemal A tubule inner sheath","termid":"GO:0160111"}


id: FYPO:0009069
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ciclopirox olamine. Cells stop growing (and may die) at a concentration of ciclopirox olamine that allows wild type cells to grow.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to ciclopirox olamine","synonyms":[{"name":"hypersensitive to ciclopirox olamine","type":"exact"},{"name":"sensitive to ciclopirox olamine during mitotic cell cycle","type":"related"},{"name":"sensitive to ciclopirox olamine during vegetative growth","type":"exact"}],"termid":"FYPO:0009069"}


id: PBO:0113398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA binding protein; partially redundant function with paralog MIP6 in the steady-state expression, translational timing and localization of a subset of Ndt80-dependent mRNAs that are protected until translated near the end of meiosis II; regulator of meiotic commitment; redundant function with MIP6 in sporulation; localizes to puncta near the openings of the prospore membrane; suppressor of a DNA polymerase epsilon mutation; induced by NDT80","termid":"PBO:0113398"}


id: PBO:0044130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTAGE family member 16, pseudogene","termid":"PBO:0044130"}


id: MONDO:0008078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis type 1","termid":"MONDO:0018975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis, familial spinal","secondary_identifiers":["OMIM:162210","UMLS:C1834235","DOID:0070482","MEDGEN:320296","MESH:C563523"],"synonyms":[{"name":"Fsnf","type":"related"},{"name":"neurofibromatosis, familial spinal","type":"exact"}],"termid":"MONDO:0008078","xrefs":{"Monarch":{"xref_id":"0008078"}}}


id: PBO:0000446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clr6 histone deacetylase associated PHD protein-2 Cph2","termid":"PBO:0000446"}


id: MONDO:0006808
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87930],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013542"}]},"cv_name":"mondo","definition":"Pathological conditions involving arteries in the skull, such as arteries supplying the cerebrum, the cerebellum, the brain stem, and associated structures. They include atherosclerotic, congenital, traumatic, infectious, inflammatory, and other pathological processes.","definition_xrefs":["MESH:D020765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebrovascular disorder","termid":"MONDO:0011057"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"is_obsolete":false,"name":"intracranial arterial disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:13089","EFO:1000990","MEDGEN:199819","UMLS:C0752138"],"termid":"MONDO:0006808","terms_by_termid":{"MONDO:0013542":null},"xrefs":{"Monarch":{"xref_id":"0006808"}}}


id: PBO:0060019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 7","termid":"PBO:0060019"}


id: PBO:0053251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX4 antisense RNA 1","termid":"PBO:0053251"}


id: MONDO:0000604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autonomic peripheral neuropathy (obsolete MONDO:0000604)","termid":"MONDO:0000604","xrefs":{"Monarch":{"xref_id":"0000604"}}}


id: GO:0061486
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of fructose from one side of a membrane to the other. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["PMID:10735857","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity fructose transmembrane transporter activity","synonyms":[{"name":"high affinity fructose transmembrane transporter activity","type":"exact"}],"termid":"GO:0061486"}


id: PBO:0012048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporulation specific PIL domain protein Meu14","termid":"PBO:0012048"}


id: GO:0019495
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of proline into other compounds, including 2-oxoglutarate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate metabolic process","termid":"GO:0006103"},{"relation_name":"is_a","term_name":"L-proline catabolic process","termid":"GO:0006562"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"proline catabolic process to 2-oxoglutarate","synonyms":[{"name":"proline breakdown to 2-oxoglutarate","type":"exact"},{"name":"proline catabolic process to 2-ketoglutarate","type":"exact"},{"name":"proline catabolic process to alpha-ketoglutarate","type":"exact"},{"name":"proline catabolic process to alpha-oxoglutarate","type":"exact"},{"name":"proline catabolism to 2-ketoglutarate","type":"exact"},{"name":"proline catabolism to alpha-ketoglutarate","type":"exact"},{"name":"proline catabolism to alpha-oxoglutarate","type":"exact"},{"name":"proline degradation to 2-oxoglutarate","type":"exact"}],"termid":"GO:0019495"}


id: MONDO:0002350
data:
  {"annotated_genes":["SJAG_04000","SJAG_03182","SJAG_04148","SJAG_04017","SJAG_03986","SJAG_00864","SJAG_04013","SJAG_03361","SJAG_00933","SJAG_01185","SJAG_01374","SJAG_04621","SJAG_00093","SJAG_00471"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[87073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[87878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[87802,87801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[87800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[88368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032580"},{"annotations":[88369,88370],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032581"},{"annotations":[88366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032582"},{"annotations":[87888,87887],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026726"},{"annotations":[86974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[87806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"}]},"cv_name":"mondo","definition":"An instance of nephrotic syndrome that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrotic syndrome","termid":"MONDO:0005377"},{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00471":null,"SJAG_00864":null,"SJAG_00933":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_03182":null,"SJAG_03361":null,"SJAG_03986":null,"SJAG_04000":null,"SJAG_04013":null,"SJAG_04017":null,"SJAG_04148":null,"SJAG_04621":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial nephrotic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:48796009","DOID:2590","icd11.foundation:1524476844","MEDGEN:502251","NCIT:C35337","OMIMPS:256300","UMLS:C3501848"],"synonyms":[{"name":"congenital nephrotic syndrome","type":"exact"},{"name":"hereditary nephrotic syndrome","type":"exact"}],"termid":"MONDO:0002350","terms_by_termid":{"MONDO:0011303":null,"MONDO:0013836":null,"MONDO:0014099":null,"MONDO:0014257":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0026726":null,"MONDO:0032580":null,"MONDO:0032581":null,"MONDO:0032582":null},"xrefs":{"Monarch":{"xref_id":"0002350"}}}


id: PBO:0061082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NKX2-1 antisense RNA 1","termid":"PBO:0061082"}


id: PBO:0000785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor IF2 (predicted)","termid":"PBO:0000785"}


id: PBO:0071418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 24","termid":"PBO:0071418"}


id: PBO:0039438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and EF-hand domain containing 1","termid":"PBO:0039438"}


id: GO:0015722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Enables the transfer of bile acid from one side of a hepatocyte plasma membrane into a bile canaliculus. Bile canaliculi are the thin tubes formed by hepatocyte membranes. Bile acids are any of a group of steroid carboxylic acids occurring in bile, where they are present as the sodium salts of their amides with glycine or taurine.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile acid and bile salt transport","termid":"GO:0015721"},{"relation_name":"is_a","term_name":"secretion","termid":"GO:0046903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"canalicular bile acid transport","termid":"GO:0015722"}


id: PR:Q8TFG4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAPB18E9.04c gene.","definition_xrefs":["UniProtKB:Q8TFG4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein PB18E9.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB18E9.04c","synonyms":[{"name":"Spom972h-SPAPB18E9.04c","type":"exact"}],"termid":"PR:Q8TFG4"}


id: MONDO:0016624
data:
  {"annotated_genes":["SJAG_04459","SJAG_01199","SJAG_00694","SJAG_03447","SJAG_01007","SJAG_04425","SJAG_03164","SJAG_04042"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009238"},{"annotations":[87227,87226],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009354"},{"annotations":[87834],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009609"},{"annotations":[88666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010184"},{"annotations":[87070],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008787"},{"annotations":[87218,87217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009797"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"deficiency anemia","termid":"MONDO:0001639"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00694":null,"SJAG_01007":null,"SJAG_01199":null,"SJAG_03164":null,"SJAG_03447":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"hereditary anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:248296","UMLS:C5680695","GARD:20669","MEDGEN:1842172"],"synonyms":[{"name":"constitutional deficiency anemia","type":"exact"},{"name":"constitutional rare deficiency anaemia","type":"exact"},{"name":"constitutional rare deficiency anemia","type":"exact"},{"name":"inherited deficiency anemia","type":"exact"}],"termid":"MONDO:0016624","terms_by_termid":{"MONDO:0008787":null,"MONDO:0009238":null,"MONDO:0009354":null,"MONDO:0009609":null,"MONDO:0009797":null,"MONDO:0010184":null},"xrefs":{"Monarch":{"xref_id":"0016624"}}}


id: PATO:0001983
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's two basal lobes being united together.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perfoliate","termid":"PATO:0001983"}


id: GO:0047917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-D-glucose + H2O = D-glucose + GDP + H+.","definition_xrefs":["RHEA:15049","EC:3.2.1.42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucosidase activity","termid":"GO:0015926"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0016798"],"is_obsolete":false,"name":"GDP-glucosidase activity","secondary_identifiers":["KEGG_REACTION:R00337","MetaCyc:GDP-GLUCOSIDASE-RXN"],"synonyms":[{"name":"GDP-glucose glucohydrolase activity","type":"related"},{"name":"GDPglucose glucohydrolase activity","type":"related"},{"name":"GDPglucosidase activity","type":"related"},{"name":"guanosine diphosphate D-glucose glucohydrolase activity","type":"related"},{"name":"guanosine diphosphoglucosidase activity","type":"related"}],"termid":"GO:0047917"}


id: GO:0106021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of vesicle docking.","definition_xrefs":["PMID:22810233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of transport","termid":"GO:0051051"},{"relation_name":"is_a","term_name":"regulation of vesicle docking","termid":"GO:0106020"},{"relation_name":"negatively_regulates","term_name":"vesicle docking","termid":"GO:0048278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0140056"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0140056"}],"interesting_parent_ids":["GO:0008150","GO:0140056","GO:0006810"],"is_obsolete":false,"name":"negative regulation of vesicle docking","synonyms":[{"name":"negative regulation of vesicle to membrane docking","type":"exact"}],"termid":"GO:0106021"}


id: MONDO:1012956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cerebellar ataxia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar degeneration, non-human animal","termid":"MONDO:1010243"},{"relation_name":"is_a","term_name":"atactic disorder, non-human animal","termid":"MONDO:1012958"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar ataxia, non-human animal","termid":"MONDO:1012956","xrefs":{"Monarch":{"xref_id":"1012956"}}}


id: GO:0047346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: aldose 1-phosphate + ADP = phosphate + ADP-aldose.","definition_xrefs":["EC:2.7.7.36","MetaCyc:2.7.7.36-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"aldose-1-phosphate adenylyltransferase activity","synonyms":[{"name":"ADP sugar phosphorylase activity","type":"related"},{"name":"ADP-aldose phosphorylase activity","type":"related"},{"name":"ADP-sugar phosphorylase activity","type":"broad"},{"name":"ADP:aldose-1-phosphate adenylyltransferase activity","type":"exact"},{"name":"ADP:alpha-D-aldose-1-phosphate adenylyltransferase activity","type":"related"},{"name":"ADPaldose phosphorylase activity","type":"related"},{"name":"adenosine diphosphate glucose:orthophosphate adenylyltransferase activity","type":"related"},{"name":"adenosine diphosphosugar phosphorylase activity","type":"related"},{"name":"sugar-1-phosphate adenylyltransferase activity","type":"broad"}],"termid":"GO:0047346"}


id: PBO:0000059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene malic acid transport protein","termid":"PBO:0000059"}


id: GO:0060671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a trophoblast cell acquires specialized features of an epithelial cell of the placental labyrinthine layer.","definition_xrefs":["GOC:dph","PMID:16916377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"labyrinthine layer development","termid":"GO:0060711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell differentiation involved in embryonic placenta development","termid":"GO:0060671"}


id: PR:Q10305
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A rab GDP dissociation inhibitor beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory pathway GDP dissociation inhibitor 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22H10.12c","secondary_identifiers":["UniProtKB:Q10305"],"synonyms":[{"name":"SPAC22H10.12c","type":"related"},{"name":"Spom972h-GDI2","type":"exact"},{"name":"sec19","type":"related"}],"termid":"PR:Q10305"}


id: MONDO:0800430
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia, susceptibility to, 7","secondary_identifiers":["UMLS:C1851969","MEDGEN:338830"],"synonyms":[{"name":"DYX7","type":"exact"}],"termid":"MONDO:0800430","xrefs":{"Monarch":{"xref_id":"0800430"}}}


id: PBO:0054861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2275","termid":"PBO:0054861"}


id: GO:0098821
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a member of the bone morphogenetic protein (BMP) family, and transmitting a signal across the plasma membrane to initiate a change in cell activity.","definition_xrefs":["GOC:dos","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0016740","GO:0016301","GO:0038023","GO:0003824","GO:0140096","GO:0004672","GO:0003674"],"is_obsolete":false,"name":"BMP receptor activity","termid":"GO:0098821"}


id: MONDO:0010136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thyroid dyshormonogenesis in which the cause of the disease is a mutation in the IYD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thyroid dyshormonogenesis","termid":"MONDO:0010132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid dyshormonogenesis 4","secondary_identifiers":["OMIM:274800","GARD:18191","UMLS:C0342195","SCTID:17885001","DOID:0112188","MESH:C562770","MEDGEN:87429"],"synonyms":[{"name":"IYD familial thyroid dyshormonogenesis","type":"exact"},{"name":"TDH4","type":"exact"},{"name":"deiodinase deficiency","type":"related"},{"name":"familial thyroid dyshormonogenesis caused by mutation in IYD","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 4","type":"exact"},{"name":"iodotyrosine dehalogenase deficiency","type":"related"},{"name":"thyroid dyshormonogenesis 4","type":"exact"},{"name":"thyroid dyshormonogenesis type 4","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 4","type":"exact"}],"termid":"MONDO:0010136","xrefs":{"Monarch":{"xref_id":"0010136"}}}


id: PBO:0086702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; may be involved in the uptake of chloride ions; does not appear to be involved in monocarboxylic acid transport; green fluorescent protein (GFP)-fusion protein localizes to the vacuole","termid":"PBO:0086702"}


id: MONDO:0015225
data:
  {"annotated_genes":["SJAG_03379","SJAG_03703","SJAG_03106","SJAG_04697","SJAG_03847","SJAG_05194","SJAG_02431","SJAG_00875","SJAG_01665","SJAG_00853","SJAG_01065","SJAG_00773","SJAG_02096","SJAG_01863","SJAG_00992"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032903"},{"annotations":[88510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030281"},{"annotations":[87988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0975826"},{"annotations":[87674],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030847"},{"annotations":[89134,89135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032751"},{"annotations":[88517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008822"},{"annotations":[87793],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014248"},{"annotations":[89141,89142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008338"},{"annotations":[89166,89167],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020746"},{"annotations":[88109],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100104"},{"annotations":[89183,89184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008675"},{"annotations":[89023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[87952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012750"},{"annotations":[88163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009670"},{"annotations":[87461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012656"},{"annotations":[87403],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014552"},{"annotations":[87783],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014806"},{"annotations":[87782],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014807"},{"annotations":[87655,87654],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008016"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00773":null,"SJAG_00853":null,"SJAG_00875":null,"SJAG_00992":null,"SJAG_01065":null,"SJAG_01665":null,"SJAG_01863":null,"SJAG_02096":null,"SJAG_02431":null,"SJAG_03106":null,"SJAG_03379":null,"SJAG_03703":null,"SJAG_03847":null,"SJAG_04697":null,"SJAG_05194":null},"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1692487835","MESH:D001176","Orphanet:109007","GARD:19870"],"synonyms":[{"name":"arthrogryposis syndrome","type":"exact"}],"termid":"MONDO:0015225","terms_by_termid":{"MONDO:0008016":null,"MONDO:0008338":null,"MONDO:0008675":null,"MONDO:0008822":null,"MONDO:0009670":null,"MONDO:0010532":null,"MONDO:0012656":null,"MONDO:0012750":null,"MONDO:0014248":null,"MONDO:0014552":null,"MONDO:0014806":null,"MONDO:0014807":null,"MONDO:0020746":null,"MONDO:0030281":null,"MONDO:0030847":null,"MONDO:0032751":null,"MONDO:0032903":null,"MONDO:0100104":null,"MONDO:0975826":null},"xrefs":{"Monarch":{"xref_id":"0015225"}}}


id: PBO:0034804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase activator Skb5","termid":"PBO:0034804"}


id: GO:0160190
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together the peroxisome and the mitochondrial outer membrane, establishing the localization of the peroxisome close to the mitochondrion.","definition_xrefs":["PMID:38669296","PMID:29720625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"}],"interesting_parent_ids":["GO:0060090","GO:0030674","GO:0003674"],"is_obsolete":false,"name":"peroxisome-mitochondrion membrane tether activity","termid":"GO:0160190"}


id: MONDO:0850445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A peritoneal benign neoplasm that is characterized by the presence of prominent hemangiopericytoma-like vessels.","definition_xrefs":["DOID:0081026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal benign neoplasm","termid":"MONDO:0000650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign peritoneal solitary fibrous tumor","termid":"MONDO:0850445","xrefs":{"Monarch":{"xref_id":"0850445"}}}


id: PBO:0018027
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not functionally complemented by S. cerevisiae POL2","termid":"PBO:0018027"}


id: PBO:0064228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCG1 antisense RNA 1","termid":"PBO:0064228"}


id: MONDO:0009521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukemia, acute myelocytic, with polyposis coli and colon cancer","secondary_identifiers":["MEDGEN:383699","OMIM:246470","MESH:C565441","UMLS:C1855505"],"synonyms":[{"name":"leukemia, acute myelocytic, with polyposis coli and colon cancer","type":"exact"}],"termid":"MONDO:0009521","xrefs":{"Monarch":{"xref_id":"0009521"}}}


id: SO:0000784
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute to describe a region from another species.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"foreign","termid":"SO:0000784"}


id: GO:0045033
data:
  {"annotated_genes":["SJAG_04315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[108722],"is_not":false,"summary":null,"term":"GO:0045033"}]},"cv_name":"biological_process","definition":"The acquisition of peroxisomes by daughter cells from the mother cell after replication. In Saccharomyces cerevisiae, the number of peroxisomes cells is fairly constant; a subset of the organelles are targeted and segregated to the bud in a highly ordered, vectorial process. Efficient segregation of peroxisomes from mother to bud is dependent on the actin cytoskeleton, and active movement of peroxisomes along actin filaments is driven by the class V myosin motor protein, Myo2p.","definition_xrefs":["PMID:11733545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome organization","termid":"GO:0007031"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04315":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0007031","GO:0008150"],"is_obsolete":false,"name":"peroxisome inheritance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0045033","terms_by_termid":{"GO:0045033":null}}


id: GO:0016007
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The major and minor mitochondrial derivatives are the mitochondria of the sperm tail and derive by the unfolding of the Nebenkern during flagellum elongation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mitochondrial derivative","termid":"GO:0016007"}


id: PR:O59868
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A calcium-transporting ATPase type 2C member 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium-transporting ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31E1.02c","secondary_identifiers":["UniProtKB:O59868"],"synonyms":[{"name":"Golgi Ca(2+)-ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ATP2C1","type":"exact"}],"termid":"PR:O59868"}


id: GO:0160033
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the Toll receptor ligand protein activation cascade.","definition_xrefs":["PMID:23632253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"regulates","term_name":"Toll receptor ligand protein activation cascade","termid":"GO:0160032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051604","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of Toll receptor ligand protein activation cascade","termid":"GO:0160033"}


id: PBO:0056021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich single-pass membrane protein 2","termid":"PBO:0056021"}


id: MONDO:0015137
data:
  {"annotated_genes":["SJAG_01474","SJAG_04865","SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88633],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013766"},{"annotations":[88736,88737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[87036,87037],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"}]},"cv_name":"mondo","definition":"Fevers of unknown etiology recurring over months or years.","definition_xrefs":["NCIT:C118240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory syndrome","termid":"MONDO:0019751"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_01474":null,"SJAG_04865":null},"genotype_count":0,"is_obsolete":false,"name":"periodic fever syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:855463","Orphanet:101995","UMLS:C3889979","MedDRA:10034533","GARD:19812"],"termid":"MONDO:0015137","terms_by_termid":{"MONDO:0009849":null,"MONDO:0012481":null,"MONDO:0013766":null},"xrefs":{"Monarch":{"xref_id":"0015137"}}}


id: PATO:0005003
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's resembling the form of a paddle.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paddle shaped","termid":"PATO:0005003"}


id: PBO:0004191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps52 (predicted)","termid":"PBO:0004191"}


id: PBO:0076275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synaptonemal complex central element protein 3","termid":"PBO:0076275"}


id: PBO:0027934
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_RNA_level_in_stationary_phase","termid":"PBO:0027934"}


id: PBO:0080764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked inhibitor of apoptosis pseudogene 3","termid":"PBO:0080764"}


id: GO:0009646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an absence of light stimuli.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to light intensity","termid":"GO:0009642"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to absence of light","synonyms":[{"name":"response to darkness","type":"related"}],"termid":"GO:0009646"}


id: PBO:0081561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 485","termid":"PBO:0081561"}


id: GO:0050293
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + testololactone = H+ + testolate.","definition_xrefs":["RHEA:13721","EC:3.1.1.37"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"steroid-lactonase activity","secondary_identifiers":["KEGG_REACTION:R03641","MetaCyc:STEROID-LACTONASE-RXN"],"synonyms":[{"name":"testololactone lactonohydrolase activity","type":"related"}],"termid":"GO:0050293"}


id: PBO:0091372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER zinc importer, CDF family, Zhf1","termid":"PBO:0091372"}


id: PBO:0072704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 1","termid":"PBO:0072704"}


id: GO:0009084
data:
  {"annotated_genes":["SJAG_01461","SJAG_04054","SJAG_01019","SJAG_00359","SJAG_00695","SJAG_00392","SJAG_00635","SJAG_01592","SJAG_00660","SJAG_04577","SJAG_04145","SJAG_00412","SJAG_00120","SJAG_03457","SJAG_03266","SJAG_00495","SJAG_00636"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73431],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006542"},{"annotations":[100169,108551,113963,104638,80428,72275,113134,120469,112516],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042450"},{"annotations":[119800,113289,60419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097054"},{"annotations":[79817,69012,92890,65944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055129"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of amino acids of the glutamine family, comprising arginine, glutamate, glutamine and proline.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine family amino acid metabolic process","termid":"GO:0009064"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"proteinogenic amino acid biosynthetic process","termid":"GO:0170038"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00120":null,"SJAG_00359":null,"SJAG_00392":null,"SJAG_00412":null,"SJAG_00495":null,"SJAG_00635":null,"SJAG_00636":null,"SJAG_00660":null,"SJAG_00695":null,"SJAG_01019":null,"SJAG_01461":null,"SJAG_01592":null,"SJAG_03266":null,"SJAG_03457":null,"SJAG_04054":null,"SJAG_04145":null,"SJAG_04577":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glutamine family amino acid biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"glutamine family amino acid anabolism","type":"exact"},{"name":"glutamine family amino acid biosynthesis","type":"exact"},{"name":"glutamine family amino acid formation","type":"exact"},{"name":"glutamine family amino acid synthesis","type":"exact"}],"termid":"GO:0009084","terms_by_termid":{"GO:0006542":null,"GO:0042450":null,"GO:0055129":null,"GO:0097054":null}}


id: GO:0046970
data:
  {"annotated_genes":["SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79294],"is_not":false,"summary":null,"term":"GO:0046970"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: histone H4 N6-acetyl-L-lysine (position 16) + NAD+ + H2O = histone H4 L-lysine (position 16) + 2''-O-acetyl-ADP-D-ribose + nicotinamide. This reaction transfers an acetyl group attached to a lysine residue in H4K16 to NAD, producing nicotinamide.","definition_xrefs":["GOC:vw","PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone deacetylase activity, NAD-dependent","termid":"GO:0017136"},{"relation_name":"is_a","term_name":"histone H4K deacetylase activity","termid":"GO:0141051"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04186":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0033558"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019213"}],"interesting_parent_ids":["GO:0016746","GO:0140096","GO:0016740","GO:0033558","GO:0019213","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"histone H4K16 deacetylase activity, NAD-dependent","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"NAD-dependent histone H4-K16 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone H4K16 deacetylase activity","type":"exact"},{"name":"NAD-dependent histone deacetylase activity (H4-K16 specific)","type":"exact"}],"termid":"GO:0046970","terms_by_termid":{"GO:0046970":null}}


id: GO:0061013
data:
  {"annotated_genes":["SJAG_04350","SJAG_03597","SJAG_01053","SJAG_03157","SJAG_02370","SJAG_03886","SJAG_01191","SJAG_03883","SJAG_00391","SJAG_02723","SJAG_04880","SJAG_00797","SJAG_03696","SJAG_01625","SJAG_04946","SJAG_03179","SJAG_02808","SJAG_03745","SJAG_00670","SJAG_01944","SJAG_05694","SJAG_02383","SJAG_05010","SJAG_04153","SJAG_01696","SJAG_04118","SJAG_02239","SJAG_00759","SJAG_01843","SJAG_02036","SJAG_04825","SJAG_02573","SJAG_05014","SJAG_00343","SJAG_04084","SJAG_05322","SJAG_00966","SJAG_04407","SJAG_03113","SJAG_04427","SJAG_04824","SJAG_01818","SJAG_04006","SJAG_03876","SJAG_03283","SJAG_04682","SJAG_02213","SJAG_16457","SJAG_00686","SJAG_00854","SJAG_01910","SJAG_00285","SJAG_04321","SJAG_04818","SJAG_02540","SJAG_01436","SJAG_01521","SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118688],"is_not":false,"summary":null,"term":"GO:0061013"},{"annotations":[120396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061158"},{"annotations":[80658,102116,80698,92199],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[79516,59107,114059,76362,77751,81560],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000290"},{"annotations":[120183],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061157"},{"annotations":[72585,91496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[91797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[93685],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:0060212"},{"annotations":[108498,117507,117946,109494,120384,97928,94256,95086,104100,99252,107289,106419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071042"},{"annotations":[72553,60678,81585,101948,78566,117206,100064,100151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000288"},{"annotations":[94608,96342,117722,77434,118666,72198,97521,80740,81687,92792,75635,94511,79658,91798],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000289"},{"annotations":[93686],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0036450"},{"annotations":[92793,119297,68092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990074"},{"annotations":[108689],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120272"},{"annotations":[106943,74687,91709],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060213"},{"annotations":[90417],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043488"},{"annotations":[91812,92202,93536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000815"},{"annotations":[100523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060211"}]},"cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of a mRNA catabolic process, the chemical reactions and pathways resulting in the breakdown of RNA, ribonucleic acid, one of the two main type of nucleic acid, consisting of a long, unbranched macromolecule formed from ribonucleotides joined in 3',5'-phosphodiester linkage.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":58,"genes_by_uniquename":{"SJAG_00285":null,"SJAG_00343":null,"SJAG_00391":null,"SJAG_00670":null,"SJAG_00686":null,"SJAG_00759":null,"SJAG_00797":null,"SJAG_00854":null,"SJAG_00966":null,"SJAG_01053":null,"SJAG_01191":null,"SJAG_01436":null,"SJAG_01521":null,"SJAG_01625":null,"SJAG_01696":null,"SJAG_01818":null,"SJAG_01843":null,"SJAG_01910":null,"SJAG_01944":null,"SJAG_02036":null,"SJAG_02213":null,"SJAG_02239":null,"SJAG_02370":null,"SJAG_02383":null,"SJAG_02540":null,"SJAG_02573":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02808":null,"SJAG_03113":null,"SJAG_03157":null,"SJAG_03179":null,"SJAG_03283":null,"SJAG_03597":null,"SJAG_03696":null,"SJAG_03745":null,"SJAG_03876":null,"SJAG_03883":null,"SJAG_03886":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04118":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04350":null,"SJAG_04407":null,"SJAG_04427":null,"SJAG_04682":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_04825":null,"SJAG_04880":null,"SJAG_04946":null,"SJAG_05010":null,"SJAG_05014":null,"SJAG_05322":null,"SJAG_05694":null,"SJAG_16457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0016071"],"is_obsolete":false,"name":"regulation of mRNA catabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of mRNA decay","type":"related"}],"termid":"GO:0061013","terms_by_termid":{"GO:0000288":null,"GO:0000289":null,"GO:0000290":null,"GO:0036450":null,"GO:0043488":null,"GO:0048255":null,"GO:0060211":null,"GO:0060212":null,"GO:0060213":null,"GO:0061013":null,"GO:0061157":null,"GO:0061158":null,"GO:0070935":null,"GO:0071042":null,"GO:0120271":null,"GO:0120272":null,"GO:1990074":null,"GO:2000815":null}}


id: MONDO:0006077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hyperplasia that involves the adrenal medulla.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperplasia","termid":"MONDO:0005043"},{"relation_name":"is_a","term_name":"adrenal gland disorder","termid":"MONDO:0005495"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal medullary hyperplasia","secondary_identifiers":["NCIT:C35838","EFO:1000076","Orphanet:688649","MEDGEN:231356","UMLS:C1332177"],"synonyms":[{"name":"adrenal medulla hyperplasia","type":"exact"}],"termid":"MONDO:0006077","xrefs":{"Monarch":{"xref_id":"0006077"}}}


