# terms

id: MONDO:0002499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete astrocytoma (obsolete MONDO:0002499)","termid":"MONDO:0002499","xrefs":{"Monarch":{"xref_id":"0002499"}}}


id: GO:0048774
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a cyanophore cell. Cyanophores are pigment cells derived from the neural crest. They contain a blue pigment of unknown chemical composition. The pigment is stored in fibrous organelles termed cyanosomes.","definition_xrefs":["GOC:mh","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment cell differentiation","termid":"GO:0050931"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cyanophore differentiation","synonyms":[{"name":"cyanophore cell differentiation","type":"exact"}],"termid":"GO:0048774"}


id: GO:0046450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dethiobiotin, a derivative of biotin formed by replacing the sulfur atom by two hydrogen atoms.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dethiobiotin metabolic process","synonyms":[{"name":"desthiobiotin metabolic process","type":"exact"},{"name":"desthiobiotin metabolism","type":"exact"},{"name":"dethiobiotin metabolism","type":"exact"}],"termid":"GO:0046450"}


id: PBO:0068765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 2","termid":"PBO:0068765"}


id: PBO:0001169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erp2/3/4 (predicted)","termid":"PBO:0001169"}


id: MONDO:0010676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, Hemizygous lethal type","secondary_identifiers":["MEDGEN:326552","MESH:C564097","OMIM:309950","UMLS:C1839671"],"synonyms":[{"name":"muscular dystrophy, Hemizygous lethal type","type":"exact"}],"termid":"MONDO:0010676","xrefs":{"Monarch":{"xref_id":"0010676"}}}


id: PBO:0044925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase beta","termid":"PBO:0044925"}


id: GO:0044824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The catalysis of the removal of two di- or tri-nucleotides from each 3' end of double-stranded viral DNA, exposing recessed 3' hydroxyls.","definition_xrefs":["PMID:22580823"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"},{"relation_name":"part_of","term_name":"retroviral integrase activity","termid":"GO:0044823"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"part_of","termid":"GO:0003824"},{"rel_name":"part_of","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016788","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"retroviral 3' processing activity","synonyms":[{"name":"3' processing reaction","type":"exact"},{"name":"3'-processing activity","type":"exact"}],"termid":"GO:0044824"}


id: GO:0034357
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane enriched in complexes formed of reaction centers, accessory pigments and electron carriers, in which photosynthetic reactions take place.","definition_xrefs":["GOC:ds","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane","termid":"GO:0016020"},{"relation_name":"part_of","term_name":"thylakoid","termid":"GO:0009579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"photosynthetic membrane","termid":"GO:0034357"}


id: PBO:0066840
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 140","termid":"PBO:0066840"}


id: PBO:0085109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear transport factor (karyopherin); involved in protein transport between the cytoplasm and nucleoplasm; similar to Nmd5p, Cse1p, Lph2p, and the human cellular apoptosis susceptibility protein, CAS1","termid":"PBO:0085109"}


id: GO:0010598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Complex that possesses NAD(P)H dehydrogenase (plastoquinone) activity. The complex is one of the components of the electron transport chain. It is involved in electron transport from an unidentified electron donor, possibly NADH, NADPH or ferredoxin(Fd) to the plastoquinone pool.","definition_xrefs":["PMID:15608332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NAD(P)H dehydrogenase complex (plastoquinone)","termid":"GO:0010598"}


id: PBO:0060996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NHL repeat containing E3 ubiquitin protein ligase 1","termid":"PBO:0060996"}


id: SO:0001280
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2'-O-methylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_prime_O_methylinosine","secondary_identifiers":["RNAMOD:081"],"synonyms":[{"name":"2'-O-methylinosine","type":"exact"},{"name":"Im","type":"exact"},{"name":"two prime O methylinosine","type":"exact"}],"termid":"SO:0001280"}


id: GO:1905363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endosomal vesicle fusion.","definition_xrefs":["GOC:bc","PMID:26911690","GO_REF:0000058","GOC:PARL","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vesicle fusion","termid":"GO:0031340"},{"relation_name":"is_a","term_name":"regulation of endosomal vesicle fusion","termid":"GO:1905364"},{"relation_name":"positively_regulates","term_name":"endosomal vesicle fusion","termid":"GO:0034058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0061024"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"positive regulation of endosomal vesicle fusion","synonyms":[{"name":"activation of endosomal vesicle fusion","type":"narrow"},{"name":"activation of endosome vesicle fusion","type":"narrow"},{"name":"positive regulation of endosome vesicle fusion","type":"exact"},{"name":"up regulation of endosomal vesicle fusion","type":"exact"},{"name":"up regulation of endosome vesicle fusion","type":"exact"},{"name":"up-regulation of endosomal vesicle fusion","type":"exact"},{"name":"up-regulation of endosome vesicle fusion","type":"exact"},{"name":"upregulation of endosomal vesicle fusion","type":"exact"},{"name":"upregulation of endosome vesicle fusion","type":"exact"}],"termid":"GO:1905363"}


id: FYPO:0003508
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing mercury ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000139","FYPO:0000257","FYPO:0000003","FYPO:0002060","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on mercury","synonyms":[{"name":"normal cell population growth in presence of mercury","type":"exact"},{"name":"normal cell population growth on mercury","type":"exact"},{"name":"normal cell population growth on mercury ion","type":"exact"},{"name":"normal cellular response to mercury","type":"related"},{"name":"normal growth on mercury ions","type":"exact"},{"name":"normal vegetative cell population growth on mercury","type":"exact"}],"termid":"FYPO:0003508"}


id: PBO:0042791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 170","termid":"PBO:0042791"}


id: PATO:0002531
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"obsolete refractory (obsolete PATO:0002531)","termid":"PATO:0002531"}


id: PBO:0078911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 2-1","termid":"PBO:0078911"}


id: GO:0071311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetate stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to acetate","termid":"GO:0010034"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetate","termid":"GO:0071311"}


id: PBO:0017765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicotinamide-nucleotide adenylyltransferase (predicted)","termid":"PBO:0017765"}


id: PBO:0057066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 148a","termid":"PBO:0057066"}


id: PBO:0048719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutaredoxin pseudogene 2","termid":"PBO:0048719"}


id: GO:0007393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell within the dorsal ectoderm becomes capable of differentiating autonomously into a leading edge cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["PMID:12147138","GOC:bf","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leading edge cell fate determination","termid":"GO:0035028"},{"relation_name":"part_of","term_name":"dorsal closure, leading edge cell fate commitment","termid":"GO:0035029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dorsal closure, leading edge cell fate determination","termid":"GO:0007393"}


id: PATO:0000890
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A male fertility quality inhering in a male by virtue of the bearer's being incapable of initiating, sustaining, or supporting reproduction.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"PATO:0000956"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male sterile","synonyms":[{"name":"male infertile","type":"related"}],"termid":"PATO:0000890"}


id: GO:1900111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 dimethylation.","definition_xrefs":["GOC:vw","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 dimethylation (obsolete GO:1900111)","synonyms":[{"name":"activation of histone H3 K9 dimethylation","type":"narrow"},{"name":"activation of histone H3-K9 dimethylation","type":"narrow"},{"name":"activation of histone lysine H3 K9 dimethylation","type":"narrow"},{"name":"positive regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"positive regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3 K9 dimethylation","type":"exact"},{"name":"up-regulation of histone H3-K9 dimethylation","type":"exact"},{"name":"up-regulation of histone lysine H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3 K9 dimethylation","type":"exact"},{"name":"upregulation of histone H3-K9 dimethylation","type":"exact"},{"name":"upregulation of histone lysine H3 K9 dimethylation","type":"exact"}],"termid":"GO:1900111"}


id: GO:0060801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The transforming growth factor signaling process that decreases the rate, frequency, or extent of trophoblast stem cells differentiating into the more mature cells of the trophoblast.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of trophoblast cell differentiation by transforming growth factor beta signaling pathway (obsolete GO:0060801)","synonyms":[{"name":"negative regulation of trophoblast cell differentiation by transforming growth factor beta signalling pathway","type":"exact"}],"termid":"GO:0060801"}


id: MONDO:0008326
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pseudocholinesterase, increase in plasma level of (obsolete MONDO:0008326)","secondary_identifiers":["OMIM:177600"],"synonyms":[{"name":"pseudocholinesterase, increase in plasma level OF","type":"related"}],"termid":"MONDO:0008326","xrefs":{"Monarch":{"xref_id":"0008326"}}}


id: PBO:0088443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynactin complex subunit, centractin family actin-like protein Arp1","termid":"PBO:0088443"}


id: GO:0019926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The oxidation of peptidyl-tryptophan to form tryptophan-6,7-dione, otherwise known as tryptophyl quinone, which is further modified by cross-linking to either tryptophan or cysteine.","definition_xrefs":["PMID:2028257","RESID:AA0148"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-tryptophan oxidation to tryptophyl quinone (obsolete GO:0019926)","termid":"GO:0019926"}


id: PBO:0049668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyaluronan binding protein 4","termid":"PBO:0049668"}


id: GO:0018985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Synthesis and ordering of the envelope of pronuclei.","definition_xrefs":["GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear envelope organization","termid":"GO:0006998"},{"relation_name":"part_of","term_name":"single fertilization","termid":"GO:0007338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"pronuclear envelope synthesis","termid":"GO:0018985"}


id: PBO:0005432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug117","termid":"PBO:0005432"}


id: PBO:0063325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1 pseudogene 1","termid":"PBO:0063325"}


id: GO:0016861
data:
  {"annotated_genes":["SJAG_00839","SJAG_01455","SJAG_01346","SJAG_03614","SJAG_04192","SJAG_02648","SJAG_00070"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73093],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003949"},{"annotations":[72161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004347"},{"annotations":[79933],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004476"},{"annotations":[70277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004640"},{"annotations":[76483],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004751"},{"annotations":[78832],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046523"},{"annotations":[73983],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004807"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which the hydrogen donor and acceptor, which is an aldose or a ketose, are the same molecule, and no oxidized product appears.","definition_xrefs":["EC:5.3.1.-","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00070":null,"SJAG_00839":null,"SJAG_01346":null,"SJAG_01455":null,"SJAG_02648":null,"SJAG_03614":null,"SJAG_04192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853"],"is_obsolete":false,"name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"synonyms":[{"name":"intramolecular isomerase activity, interconverting aldoses and ketoses","type":"exact"}],"termid":"GO:0016861","terms_by_termid":{"GO:0003949":null,"GO:0004347":null,"GO:0004476":null,"GO:0004640":null,"GO:0004751":null,"GO:0004807":null,"GO:0046523":null}}


id: GO:0015965
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving diadenosine tetraphosphate, a derivative of the nucleoside adenosine with four phosphate groups attached.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete diadenosine tetraphosphate metabolic process (obsolete GO:0015965)","synonyms":[{"name":"diadenosine tetraphosphate metabolism","type":"exact"}],"termid":"GO:0015965"}


id: GO:1903378
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxidative stress-induced neuron intrinsic apoptotic signaling pathway.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of neuron apoptotic process","termid":"GO:0043525"},{"relation_name":"is_a","term_name":"positive regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902177"},{"relation_name":"is_a","term_name":"regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","termid":"GO:1903376"},{"relation_name":"positively_regulates","term_name":"neuron intrinsic apoptotic signaling pathway in response to oxidative stress","termid":"GO:0036480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxidative stress-induced neuron intrinsic apoptotic signaling pathway","synonyms":[{"name":"activation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"activation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"narrow"},{"name":"positive regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"positive regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"up-regulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"up-regulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"},{"name":"upregulation of neuron apoptosis in response to oxidative stress","type":"related"},{"name":"upregulation of neuron intrinsic apoptotic signaling pathway in response to oxidative stress","type":"exact"}],"termid":"GO:1903378"}


id: FYPO:0005502
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription is abnormal in extent, timing, start or termination site, etc. All genes, or a specific subset of genes, may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype","termid":"FYPO:0004847"},{"relation_name":"is_a","term_name":"abnormal RNA metabolic process","termid":"FYPO:0004851"},{"relation_name":"is_a","term_name":"abnormal gene expression","termid":"FYPO:0006551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal transcription","synonyms":[{"name":"abnormal transcription, DNA-dependent","type":"exact"}],"termid":"FYPO:0005502"}


id: PBO:0113240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear-enriched ubiquitin-like polyubiquitin-binding protein; K48-Ub chain binding protein that also binds K63-linked chains in vitro; required for spindle pole body (SPB) duplication and for transit through the G2/M phase of the cell cycle; involved in proteolysis; interacts with the proteasome; contains an N-terminal Ub-like (UBL) and a C-terminal Ub-associated (UBA) domain; protein abundance increases in response to DNA replication stress","termid":"PBO:0113240"}


id: GO:0042470
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored. Melanosomes are synthesized in melanocyte cells.","definition_xrefs":["PMID:11584301","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment granule","termid":"GO:0048770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"melanosome","secondary_identifiers":["Wikipedia:Melanosome"],"termid":"GO:0042470"}


id: GO:0030805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the breakdown of cyclic nucleotides.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleotide catabolic process","termid":"GO:0030811"},{"relation_name":"regulates","term_name":"cyclic nucleotide catabolic process","termid":"GO:0009214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"regulation of cyclic nucleotide catabolic process","synonyms":[{"name":"regulation of cyclic nucleotide breakdown","type":"exact"},{"name":"regulation of cyclic nucleotide catabolism","type":"exact"},{"name":"regulation of cyclic nucleotide degradation","type":"exact"}],"termid":"GO:0030805"}


id: GO:1901984
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein acetylation.","definition_xrefs":["PMID:22117195","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein modification process","termid":"GO:0031400"},{"relation_name":"is_a","term_name":"regulation of protein acetylation","termid":"GO:1901983"},{"relation_name":"negatively_regulates","term_name":"protein acetylation","termid":"GO:0006473"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein acetylation","synonyms":[{"name":"down regulation of protein acetylation","type":"exact"},{"name":"down regulation of protein amino acid acetylation","type":"exact"},{"name":"down-regulation of protein acetylation","type":"exact"},{"name":"down-regulation of protein amino acid acetylation","type":"exact"},{"name":"downregulation of protein acetylation","type":"exact"},{"name":"downregulation of protein amino acid acetylation","type":"exact"},{"name":"inhibition of protein acetylation","type":"narrow"},{"name":"inhibition of protein amino acid acetylation","type":"narrow"},{"name":"negative regulation of protein amino acid acetylation","type":"exact"}],"termid":"GO:1901984"}


id: PBO:0031743
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_invasive_growth_(obsolete_FYPO:0000466)","termid":"PBO:0031743"}


id: PBO:0053930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1229","termid":"PBO:0053930"}


id: PBO:0075825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal sequence receptor subunit 1 pseudogene 1","termid":"PBO:0075825"}


id: MONDO:0006465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid gland oncocytic follicular carcinoma (obsolete MONDO:0006465)","secondary_identifiers":["EFO:1000592"],"termid":"MONDO:0006465","xrefs":{"Monarch":{"xref_id":"0006465"}}}


id: MONDO:0012926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any amelogenesis imperfecta in which the cause of the disease is a mutation in the MMP20 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amelogenesis imperfecta type 2","termid":"MONDO:0015048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta hypomaturation type 2A2","secondary_identifiers":["DOID:0110060","OMIM:612529","GARD:15563","MESH:C567279","MEDGEN:436540","UMLS:C2675858"],"synonyms":[{"name":"AI2A2","type":"exact"},{"name":"MMP20 amelogenesis imperfecta","type":"exact"},{"name":"amelogenesis imperfecta caused by mutation in MMP20","type":"exact"},{"name":"amelogenesis imperfecta hypomaturation type IIA2","type":"exact"},{"name":"amelogenesis imperfecta pigmented hypomaturation type 2","type":"exact"},{"name":"amelogenesis imperfecta type IIA2","type":"exact"},{"name":"amelogenesis imperfecta, hypomaturation type, IIA2","type":"related"},{"name":"amelogenesis imperfecta, pigmented hypomaturation type, 2","type":"related"},{"name":"amelogenesis imperfecta, type IIA2","type":"exact"}],"termid":"MONDO:0012926","xrefs":{"Monarch":{"xref_id":"0012926"}}}


id: PBO:0076201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 11","termid":"PBO:0076201"}


id: PBO:0002001
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.4.23.-","termid":"PBO:0002001"}


id: FYPO:0005479
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal during a cellular response to arsenite ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during vegetative growth","termid":"FYPO:0001838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002274","FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein phosphorylation during cellular response to arsenite ion","synonyms":[{"name":"decreased protein phosphorylation during cellular response to arsenite","type":"exact"},{"name":"decreased protein phosphorylation during cellular response to arsenite ion during mitotic cell cycle","type":"related"},{"name":"decreased protein phosphorylation during cellular response to arsenite ion during vegetative growth","type":"exact"},{"name":"reduced protein phosphorylation during cellular response to arsenite ion","type":"exact"}],"termid":"FYPO:0005479"}


id: PR:O14199
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A UDP-N-acetylglucosamine transferase subunit ALG14 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00606","PANTHER:PTHR12154:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetylglucosamine transferase subunit alg14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5D6.06c","secondary_identifiers":["UniProtKB:O14199"],"synonyms":[{"name":"Spom972h-ALG14","type":"exact"},{"name":"asparagine-linked glycosylation protein 14 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14199"}


id: PBO:0066946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 248","termid":"PBO:0066946"}


id: PBO:0079929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin related modifier 1","termid":"PBO:0079929"}


id: PBO:0000870
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathionuria","termid":"PBO:0000870"}


id: GO:1900591
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving violaceol II.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catechol-containing compound metabolic process","termid":"GO:0009712"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"violaceol II metabolic process","synonyms":[{"name":"violaceol II metabolism","type":"exact"}],"termid":"GO:1900591"}


id: PBO:0065689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentraxin 3","termid":"PBO:0065689"}


id: GO:0009687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"apocarotenoid metabolic process","termid":"GO:0043288"},{"relation_name":"is_a","term_name":"olefinic compound metabolic process","termid":"GO:0120254"},{"relation_name":"is_a","term_name":"tertiary alcohol metabolic process","termid":"GO:1902644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"abscisic acid metabolic process","synonyms":[{"name":"abscisic acid metabolism","type":"exact"}],"termid":"GO:0009687"}


id: GO:1990192
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A decrease in the diameter of collecting lymphatic vessels.","definition_xrefs":["PMID:23322290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphatic vessel size","termid":"GO:1990186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"collecting lymphatic vessel constriction","synonyms":[{"name":"lymphatic vessel myogenic constriction","type":"exact"}],"termid":"GO:1990192"}


id: FYPO:0009068
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of ciclopirox olamine than normal.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002682","FYPO:0000139","FYPO:0005447","FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"resistance to ciclopirox olamine","synonyms":[{"name":"resistance to ciclopirox olamine during mitotic cell cycle","type":"related"},{"name":"resistance to ciclopirox olamine during vegetative growth","type":"exact"},{"name":"resistant to ciclopirox olamine","type":"exact"}],"termid":"FYPO:0009068"}


id: GO:0003181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the structure of the atrioventricular valve is generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve morphogenesis","termid":"GO:0003179"},{"relation_name":"part_of","term_name":"atrioventricular valve development","termid":"GO:0003171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrioventricular valve morphogenesis","synonyms":[{"name":"AV valve morphogenesis","type":"exact"}],"termid":"GO:0003181"}


id: MONDO:0012910
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"presbycusis","termid":"MONDO:0043765"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"age-related hearing impairment 1","secondary_identifiers":["MESH:C567305","UMLS:C2676230","OMIM:612448","MEDGEN:382794"],"synonyms":[{"name":"ARHI1","type":"exact"},{"name":"age-related hearing impairment 1","type":"exact"},{"name":"presbycusis 1","type":"related"}],"termid":"MONDO:0012910","xrefs":{"Monarch":{"xref_id":"0012910"}}}


id: PBO:0003959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCM loader","termid":"PBO:0003959"}


id: MONDO:0020663
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A malignant neoplasm characterized by the presence of atypical spindle cells.","definition_xrefs":["NCIT:C27091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"spindle cell neoplasm","termid":"MONDO:0020664"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant spindle cell neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:90746","UMLS:C0334230"],"synonyms":[{"name":"malignant spindle cell neoplasm","type":"exact"},{"name":"malignant spindle cell tumor","type":"exact"},{"name":"malignant spindle cell tumour","type":"exact"},{"name":"spindle cell cancer","type":"exact"}],"termid":"MONDO:0020663","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0020663"}}}


id: PBO:0043283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member G","termid":"PBO:0043283"}


id: PBO:0038767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin related protein 5","termid":"PBO:0038767"}


id: PBO:0086320
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to heat shock transcription factors; overexpression suppresses the pseudohyphal filamentation defect of a diploid mep1 mep2 homozygous null mutant; HMS2 has a paralog, SKN7, that arose from the whole genome duplication","termid":"PBO:0086320"}


id: PBO:0054629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2034","termid":"PBO:0054629"}


id: PBO:0111751
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein","termid":"PBO:0111751"}


id: PBO:0050166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 3 pseudogene 22","termid":"PBO:0050166"}


id: GO:0070944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a bacterium by a neutrophil.","definition_xrefs":["GOC:add","ISBN:0781765196"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neutrophil-mediated killing of symbiont cell","termid":"GO:0070943"},{"relation_name":"part_of","term_name":"defense response to bacterium","termid":"GO:0042742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neutrophil-mediated killing of bacterium","synonyms":[{"name":"neutrophil mediated killing of bacterium","type":"exact"}],"termid":"GO:0070944"}


id: PBO:0048381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgi associated RAB2 interactor 5A","termid":"PBO:0048381"}


id: PBO:0074269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"schlafen family member 11","termid":"PBO:0074269"}


id: PBO:0089394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transmembrane transporter Fnx2","termid":"PBO:0089394"}


id: PBO:0120876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TGFB2 antisense RNA 1","termid":"PBO:0120876"}


id: GO:0019937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The autocatalytic formation of isopeptide bonds by ligation of peptidyl-lysine and peptidyl-asparagine residues; known to occur in the capsid of some bacteriophage, such as HK97, where it is thought to provide a mechanism for stabilizing the capsid.","definition_xrefs":["RESID:AA0294"],"gene_count":0,"genotype_count":0,"name":"obsolete protein catenane formation via N6-(L-isoaspartyl)-L-lysine, autocatalytic (obsolete GO:0019937)","termid":"GO:0019937"}


id: MONDO:0008792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial angiolipomatosis is a rare, genetic, subcutaneous tissue disorder characterized by the presence of benign, usually multiple, subcutaneous tumors composed of adipose tissue and blood vessels, typically manifesting as yellow, firm, circumscribed, 1-4 cm in diameter tumors located in the arms, legs and trunk, with deep extension of the lesions between muscles, tendons and joint capsules (without infiltration of these structures), in several members of a single family. Tumors may be tender or mildly painful when palpated and do not regress spontaneously.","definition_xrefs":["Orphanet:199279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial angiolipomatosis","secondary_identifiers":["GARD:17089","UMLS:C1859784","MESH:C565951","MEDGEN:347235","OMIM:206550"],"synonyms":[{"name":"angiolipoma Microthromboticum","type":"related"},{"name":"angiolipomatosis, familial","type":"related"}],"termid":"MONDO:0008792","xrefs":{"Monarch":{"xref_id":"0008792"}}}


id: GO:1904520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of myofibroblast cell apoptotic process.","definition_xrefs":["PMID:26119034","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process","termid":"GO:0042981"},{"relation_name":"regulates","term_name":"myofibroblast cell apoptotic process","termid":"GO:1904516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myofibroblast cell apoptotic process","synonyms":[{"name":"regulation of MFB apoptosis","type":"narrow"},{"name":"regulation of MFB apoptotic process","type":"exact"},{"name":"regulation of myofibroblast cell apoptosis","type":"narrow"}],"termid":"GO:1904520"}


id: MONDO:0033544
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tolchin-Le Caignec syndrome","secondary_identifiers":["OMIM:618971","GARD:18525","MEDGEN:1724999","UMLS:C5436509"],"synonyms":[{"name":"TOLCAS","type":"related"},{"name":"TOLCHIN-LE CAIGNEC SYNDROME","type":"related"},{"name":"intellectual developmental disorder With behavioral abnormalities and variable bone defects","type":"related"},{"name":"intellectual developmental disorder With behavioural abnormalities and variable bone defects","type":"related"}],"termid":"MONDO:0033544","xrefs":{"Monarch":{"xref_id":"0033544"}}}


id: PBO:0015253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tlg1 (predicted)","termid":"PBO:0015253"}


id: FYPO:0002465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which none of the cells in a population of spores are viable, and all have an abnormal shape. Inviable spores do not germinate.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable spore population with abnormal spore shape (obsolete FYPO:0002465)","synonyms":[{"name":"inviable population of spores with abnormal shape","type":"exact"},{"name":"inviable spore population with abnormal shape","type":"exact"}],"termid":"FYPO:0002465"}


id: PBO:0046476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERCC excision repair 1, endonuclease non-catalytic subunit","termid":"PBO:0046476"}


id: GO:0048805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of genitalia are generated and organized from the genital imaginal disc.","definition_xrefs":["GOC:sensu","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic genitalia morphogenesis","termid":"GO:0035126"},{"relation_name":"part_of","term_name":"genital disc morphogenesis","termid":"GO:0007483"},{"relation_name":"part_of","term_name":"imaginal disc-derived genitalia development","termid":"GO:0007484"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived genitalia morphogenesis","synonyms":[{"name":"genital morphogenesis","type":"broad"}],"termid":"GO:0048805"}


id: MONDO:0002545
data:
  {"annotated_genes":["SJAG_03170","SJAG_02695","SJAG_03495","SJAG_03345","SJAG_01537","SJAG_00053","SJAG_02289","SJAG_03923","SJAG_04084","SJAG_04178","SJAG_04387","SJAG_04042","SJAG_04459","SJAG_00754","SJAG_01260","SJAG_00106","SJAG_03712","SJAG_04489","SJAG_03328","SJAG_07000","SJAG_03894","SJAG_00853","SJAG_03815","SJAG_04567","SJAG_02286","SJAG_00668","SJAG_02509","SJAG_02919","SJAG_01352","SJAG_04321","SJAG_01317","SJAG_02399","SJAG_01522","SJAG_02242","SJAG_04907","SJAG_04425","SJAG_03598","SJAG_04156","SJAG_01466","SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88701,88702],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008453"},{"annotations":[88570],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859529"},{"annotations":[89285,87222],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007103"},{"annotations":[88765],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012945"},{"annotations":[88883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010459"},{"annotations":[87628],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013715"},{"annotations":[87376,87375],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014531"},{"annotations":[88495,88496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011223"},{"annotations":[88625,88626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012077"},{"annotations":[87824],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008026"},{"annotations":[87236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011436"},{"annotations":[87120],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011585"},{"annotations":[88730],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013501"},{"annotations":[87303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010936"},{"annotations":[87154],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010043"},{"annotations":[89023],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010532"},{"annotations":[89366,89363,89367,89364,89368,89362,89365],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011120"},{"annotations":[87998,87999,88000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008025"},{"annotations":[88613,88615,88614],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012080"},{"annotations":[88295,88296,88294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013243"},{"annotations":[87299],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015353"},{"annotations":[88150],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013884"},{"annotations":[87675],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030860"},{"annotations":[88175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011879"},{"annotations":[87200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0060585"},{"annotations":[88291],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013853"},{"annotations":[88588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[89078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[89082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[88896],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014485"},{"annotations":[88073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"},{"annotations":[88168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009669"},{"annotations":[88424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009673"},{"annotations":[88030],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009672"},{"annotations":[88190],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010056"},{"annotations":[89275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[88257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010338"}]},"cv_name":"mondo","definition":"A disease involving the spinal cord.","direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system disorder","termid":"MONDO:0002602"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00106":null,"SJAG_00668":null,"SJAG_00754":null,"SJAG_00853":null,"SJAG_01260":null,"SJAG_01317":null,"SJAG_01352":null,"SJAG_01466":null,"SJAG_01522":null,"SJAG_01537":null,"SJAG_02242":null,"SJAG_02286":null,"SJAG_02289":null,"SJAG_02399":null,"SJAG_02509":null,"SJAG_02695":null,"SJAG_02919":null,"SJAG_03170":null,"SJAG_03328":null,"SJAG_03345":null,"SJAG_03495":null,"SJAG_03598":null,"SJAG_03712":null,"SJAG_03815":null,"SJAG_03894":null,"SJAG_03923":null,"SJAG_04042":null,"SJAG_04084":null,"SJAG_04156":null,"SJAG_04178":null,"SJAG_04321":null,"SJAG_04387":null,"SJAG_04425":null,"SJAG_04459":null,"SJAG_04489":null,"SJAG_04567":null,"SJAG_04907":null,"SJAG_05289":null,"SJAG_07000":null},"genotype_count":0,"is_obsolete":false,"name":"spinal cord disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C97110","SCTID:48522003","ICD9:336.9","UMLS:C0037928","ICD9:336.8","DOID:319","MESH:D013118","MEDGEN:11550","EFO:0009488"],"synonyms":[{"name":"disease of spinal cord","type":"exact"},{"name":"disease of the spinal cord","type":"exact"},{"name":"disease or disorder of spinal cord","type":"exact"},{"name":"disorder of spinal cord","type":"exact"},{"name":"myelopathy","type":"related"},{"name":"spinal cord disease","type":"exact"},{"name":"spinal cord disease or disorder","type":"exact"},{"name":"spinal cord disorder","type":"exact"}],"termid":"MONDO:0002545","terms_by_termid":{"MONDO:0007103":null,"MONDO:0008025":null,"MONDO:0008026":null,"MONDO:0008453":null,"MONDO:0008458":null,"MONDO:0009669":null,"MONDO:0009672":null,"MONDO:0009673":null,"MONDO:0010043":null,"MONDO:0010056":null,"MONDO:0010190":null,"MONDO:0010338":null,"MONDO:0010459":null,"MONDO:0010532":null,"MONDO:0010936":null,"MONDO:0011120":null,"MONDO:0011223":null,"MONDO:0011436":null,"MONDO:0011585":null,"MONDO:0011879":null,"MONDO:0012077":null,"MONDO:0012080":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0012945":null,"MONDO:0013243":null,"MONDO:0013501":null,"MONDO:0013715":null,"MONDO:0013853":null,"MONDO:0013884":null,"MONDO:0014485":null,"MONDO:0014531":null,"MONDO:0014874":null,"MONDO:0015353":null,"MONDO:0030860":null,"MONDO:0060585":null,"MONDO:0859529":null},"xrefs":{"Monarch":{"xref_id":"0002545"}}}


id: GO:0060755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency or extent of mast cell chemotaxis. Mast cell chemotaxis is the movement of a mast cell in response to an external stimulus.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of leukocyte chemotaxis","termid":"GO:0002689"},{"relation_name":"is_a","term_name":"regulation of mast cell chemotaxis","termid":"GO:0060753"},{"relation_name":"negatively_regulates","term_name":"mast cell chemotaxis","termid":"GO:0002551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mast cell chemotaxis","termid":"GO:0060755"}


id: PBO:0031643
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_shmoo_formation","termid":"PBO:0031643"}


id: PBO:0079558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBA domain containing 2","termid":"PBO:0079558"}


id: PBO:0076597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 19","termid":"PBO:0076597"}


id: GO:0033173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any intracellular signal transduction in which the signal is passed on within the cell by activation of a member of the NFAT protein family as a consequence of NFAT dephosphorylation by Ca(2+)-activated calcineurin. The cascade begins with calcium-dependent activation of the phosphatase calcineurin. Calcineurin dephosphorylates multiple phosphoserine residues on NFAT, resulting in the translocation of NFAT to the nucleus. The cascade ends with regulation of transcription by NFAT. The calcineurin-NFAT cascade lies downstream of many cell surface receptors, including G protein-coupled receptors (GPCRs) and receptor tyrosine kinases (RTKs) that signal to mobilize calcium ions (Ca2+).","definition_xrefs":["GOC:mah","GOC:lm","PMID:12975316","PMID:15928679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calcineurin-mediated signaling","termid":"GO:0097720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"calcineurin-NFAT signaling cascade","synonyms":[{"name":"calcineurin-NFAT signaling pathway","type":"related"},{"name":"calcineurin-NFAT signalling pathway","type":"related"}],"termid":"GO:0033173"}


id: GO:0003238
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the conus arteriosus over time, from its formation to the mature structure. The conus arteriosus is a valved chamber with thick muscular walls stemming from the ventricle and connecting to the pulmonary trunk.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac chamber development","termid":"GO:0003205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"conus arteriosus development","termid":"GO:0003238"}


id: MONDO:0011013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant hypocalcemia in which the cause of the disease is a mutation in the CASR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypocalcemia","termid":"MONDO:0018543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005066"],"is_obsolete":false,"name":"autosomal dominant hypocalcemia 1","secondary_identifiers":["UMLS:C0342345","MEDGEN:87438","DOID:0090107","OMIM:601198"],"synonyms":[{"name":"CASR autosomal dominant hypocalcemia","type":"exact"},{"name":"HYPOC1","type":"exact"},{"name":"autosomal dominant hypocalcemia caused by mutation in CASR","type":"exact"},{"name":"autosomal dominant hypocalcemia type 1","type":"exact"},{"name":"hypercalciuric hypocalcemia","type":"related"},{"name":"hypocalcemia, autosomal dominant","type":"broad"},{"name":"hypocalcemia, autosomal dominant 1","type":"related"},{"name":"hypocalcemia, autosomal dominant 1, with Bartter syndrome","type":"related"},{"name":"hypocalcemia, autosomal dominant type 1","type":"exact"},{"name":"hypocalcemia, autosomal dominant, with Bartter syndrome","type":"exact"},{"name":"hypocalcemia, familial","type":"related"}],"termid":"MONDO:0011013","xrefs":{"Monarch":{"xref_id":"0011013"}}}


id: PBO:0078097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 5","termid":"PBO:0078097"}


id: MONDO:0019785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete 15q24 microdeletion syndrome (obsolete MONDO:0019785)","termid":"MONDO:0019785","xrefs":{"Monarch":{"xref_id":"0019785"}}}


id: GO:0020039
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The structure enclosing certain parasite cells such as certain apicomplexa and Euglenozoa; consists of the cell membrane with its associated infrastructure of microtubules, microfilaments and other organelles.","definition_xrefs":["GOC:mah","GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pellicle","termid":"GO:0020039"}


id: PBO:0113056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of glucose deprivation induced stress granules; involved in P-body-dependent granule assembly; regulates TORC1 signaling and autophagy; interacts with Pab1p to regulate mRNA polyadenylation; interacts with Mkt1p to regulate HO translation; regulates expression of genes involved in gluconeogenesis and mitochondrial function through multiple mechanisms","termid":"PBO:0113056"}


id: PBO:0085671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in outer spore wall assembly; likely involved directly in dityrosine layer assembly; putative GPI-anchored protein; overexpression causes growth arrest;; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the endoplasmic reticulum; SHE10 has a paralog, OSW7/YFR039C, that arose from the whole genome duplication; paralogs are redundant for spore wall dityrosine assembly","termid":"PBO:0085671"}


id: GO:0032159
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A faint structure formed of septins found at the leading edge of growth in germ tubes and hyphae in fungal cells growing filamentously. This cap of septins colocalizes with a region of the plasma membrane that is rich in ergosterol.","definition_xrefs":["PMID:16151244","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septin cytoskeleton","termid":"GO:0032156"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septin cap","termid":"GO:0032159"}


id: GO:0018228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of peptidyl-cysteine to form peptidyl-S-geranylgeranylcysteine; formation of S-geranylgeranyl-L-cysteine may be coupled with subsequent cleavage of a carboxy-terminal tripeptide for the CAAX motif and methyl esterification of the geranylgeranylated cysteine; methyl esterification but not cleavage occurs for the CXC motif. For the type II geranylgeranyltransferase the residue may be found at the first and final positions in the sequence motif C-X-C* or at the final position in the sequence motif C-C*. These motifs are necessary but not sufficient for modification.","definition_xrefs":["RESID:AA0104"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-S-geranylgeranyl-L-cysteine biosynthetic process from peptidyl-cysteine (obsolete GO:0018228)","synonyms":[{"name":"peptidyl-S-geranylgeranyl-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-geranylgeranyl-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-geranylgeranyl-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018228"}


id: GO:0048174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases short-term neuronal synaptic plasticity, the ability of neuronal synapses to change in the short-term as circumstances require. Short-term neuronal synaptic plasticity generally involves increasing or decreasing synaptic sensitivity.","definition_xrefs":["GOC:jid","PMID:11891290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of short-term neuronal synaptic plasticity","termid":"GO:0048172"},{"relation_name":"is_a","term_name":"negative regulation of neurogenesis","termid":"GO:0050768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of short-term neuronal synaptic plasticity","synonyms":[{"name":"down regulation of short-term neuronal synaptic plasticity","type":"exact"},{"name":"down-regulation of short-term neuronal synaptic plasticity","type":"exact"},{"name":"downregulation of short-term neuronal synaptic plasticity","type":"exact"},{"name":"inhibition of short-term neuronal synaptic plasticity","type":"narrow"}],"termid":"GO:0048174"}


id: PBO:0089780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetyl-CoA ligase","termid":"PBO:0089780"}


id: GO:0071392
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of stimulus by estradiol, a C18 steroid hormone hydroxylated at C3 and C17 that acts as a potent estrogen.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to estradiol","termid":"GO:0032355"},{"relation_name":"is_a","term_name":"cellular response to lipid","termid":"GO:0071396"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to estradiol stimulus","synonyms":[{"name":"cellular response to E2 stimulus","type":"exact"}],"termid":"GO:0071392"}


id: PBO:0071772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 5","termid":"PBO:0071772"}


id: PBO:0012289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human LAMTOR2 ortholog","termid":"PBO:0012289"}


id: PBO:0084662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 3-hydroxyacyl-thioester dehydratase; involved in fatty acid biosynthesis, required for respiratory growth and for normal mitochondrial morphology","termid":"PBO:0084662"}


id: GO:0019498
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the conversion of n-octane to octanoyl-CoA.","definition_xrefs":["MetaCyc:P221-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"n-octane oxidation","termid":"GO:0019498"}


id: PR:Q09757
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09757"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S9-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.07","synonyms":[{"name":"Spom972h-rps901","type":"exact"}],"termid":"PR:Q09757"}


id: PR:O13651
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An isoleucine--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11946:SF11","OMA:SCHPO02832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC8D2.06","secondary_identifiers":["UniProtKB:O13651"],"synonyms":[{"name":"IleRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-IARS","type":"exact"},{"name":"isoleucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O13651"}


id: PBO:0016048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EKC/KEOPS protein complex associated ATPase (predicted)","termid":"PBO:0016048"}


id: PBO:0051265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (IV)-44-1 (pseudogene)","termid":"PBO:0051265"}


id: PBO:0090125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginase (predicted)","termid":"PBO:0090125"}


id: PBO:0048290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galanin receptor 2","termid":"PBO:0048290"}


id: MONDO:0008256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"platelet membrane fluidity","secondary_identifiers":["UMLS:C1868201","MEDGEN:401393","OMIM:173560"],"synonyms":[{"name":"PMF","type":"related"},{"name":"platelet membrane fluidity","type":"exact"}],"termid":"MONDO:0008256","xrefs":{"Monarch":{"xref_id":"0008256"}}}


id: PBO:0111761
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF hand","termid":"PBO:0111761"}


id: GO:0043277
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The recognition and removal of an apoptotic cell by a neighboring cell or by a phagocyte.","definition_xrefs":["PMID:14685684","GOC:rk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phagocytosis","termid":"GO:0006909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"apoptotic cell clearance","synonyms":[{"name":"apoptotic cell removal","type":"exact"},{"name":"efferocytosis","type":"exact"},{"name":"programmed cell clearance","type":"exact"}],"termid":"GO:0043277"}


id: PBO:0086688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified in a screen for mutants with decreased levels of rDNA transcription; green fluorescent protein (GFP)-fusion protein localizes to the nucleolus; predicted to be involved in ribosome biogenesis","termid":"PBO:0086688"}


id: GO:0097212
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a lysosomal membrane. A lysosomal membrane is the lipid bilayer surrounding the lysosome and separating its contents from the cell cytoplasm.","definition_xrefs":["PMID:20544854","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"lysosome organization","termid":"GO:0007040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"lysosomal membrane organization","synonyms":[{"name":"lysosomal membrane organisation","type":"exact"},{"name":"lysosome membrane organization","type":"exact"}],"termid":"GO:0097212"}


id: MONDO:0017819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dentin dysplasia type I","termid":"MONDO:0007436"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atypical dentin dysplasia due to SMOC2 deficiency","secondary_identifiers":["MEDGEN:1673452","UMLS:C5190802","Orphanet:314721","GARD:17433"],"synonyms":[{"name":"dentin dysplasia type 1 with microdontia and shape anomalies","type":"exact"}],"termid":"MONDO:0017819","xrefs":{"Monarch":{"xref_id":"0017819"}}}


id: PR:O74340
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DDB1- and CUL4-associated factor 13 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22851:SF0","OMA:SCHPO03079","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein sof1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1A4.07c","secondary_identifiers":["UniProtKB:O74340"],"synonyms":[{"name":"Spom972h-DCAF13","type":"exact"},{"name":"U3 small nucleolar RNA-associated protein sof1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U3 snoRNA-associated protein sof1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74340"}


id: GO:0043079
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The nucleus of an antipodal cell, one of three cells of the embryo sac in angiosperms, found at the chalazal end of the embryo away from the point of entry of the pollen tube, and its descendents.","definition_xrefs":["GOC:jl","CL:0000537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"megasporocyte nucleus","termid":"GO:0043076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005634","GO:0005575"],"is_obsolete":false,"name":"antipodal cell nucleus","termid":"GO:0043079"}


id: GO:1903994
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of protein stabilization.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18573880"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of protein stabilization (obsolete GO:1903994)","synonyms":[{"name":"activation of lysosomal protein stabilization","type":"narrow"},{"name":"activation of positive regulation of protein stability","type":"narrow"},{"name":"activation of protein sequestering","type":"related"},{"name":"activation of protein stabilization","type":"narrow"},{"name":"activation of protein stabilization activity","type":"related"},{"name":"positive regulation of lysosomal protein stabilization","type":"narrow"},{"name":"positive regulation of positive regulation of protein stability","type":"exact"},{"name":"positive regulation of protein sequestering","type":"related"},{"name":"positive regulation of protein stabilization","type":"exact"},{"name":"positive regulation of protein stabilization activity","type":"related"},{"name":"up regulation of lysosomal protein stabilization","type":"narrow"},{"name":"up regulation of positive regulation of protein stability","type":"exact"},{"name":"up regulation of protein sequestering","type":"related"},{"name":"up regulation of protein stabilization","type":"exact"},{"name":"up regulation of protein stabilization activity","type":"related"},{"name":"up-regulation of lysosomal protein stabilization","type":"narrow"},{"name":"up-regulation of positive regulation of protein stability","type":"exact"},{"name":"up-regulation of protein sequestering","type":"related"},{"name":"up-regulation of protein stabilization","type":"exact"},{"name":"up-regulation of protein stabilization activity","type":"related"},{"name":"upregulation of lysosomal protein stabilization","type":"narrow"},{"name":"upregulation of positive regulation of protein stability","type":"exact"},{"name":"upregulation of protein sequestering","type":"related"},{"name":"upregulation of protein stabilization","type":"exact"},{"name":"upregulation of protein stabilization activity","type":"related"}],"termid":"GO:1903994"}


id: PBO:0078111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 1-1","termid":"PBO:0078111"}


id: MONDO:0800388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poisoning that is caused by exposure to cardiac glycoside.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poisoning","termid":"MONDO:0029000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac glycoside intoxication","synonyms":[{"name":"cardiac glycoside poisoning","type":"exact"},{"name":"digitalis intoxication","type":"narrow"},{"name":"digitalis toxicity","type":"narrow"}],"termid":"MONDO:0800388","xrefs":{"Monarch":{"xref_id":"0800388"}}}


id: GO:0097244
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a flavonol, a flavonoid that contains a 3-hydroxy-2-phenylchromen-4-one backbone.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flavonol binding","termid":"GO:0097244"}


id: FYPO:0007323
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which stress granule assembly is normal (i.e. indistinguishable from wild type) during a cellular response to heat.","definition_xrefs":["PMID:32071154","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal stress granule assembly during vegetative growth","termid":"FYPO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal stress granule assembly during cellular response to heat","synonyms":[{"name":"normal cytoplasmic stress granule assembly during cellular response to heat","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat during mitotic cell cycle","type":"related"},{"name":"normal stress granule assembly during cellular response to heat during vegetative growth","type":"exact"},{"name":"normal stress granule assembly during cellular response to heat stress","type":"exact"},{"name":"normal stress granule formation during cellular response to heat","type":"exact"}],"termid":"FYPO:0007323"}


id: GO:0047904
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a ubiquinone + keto-D-fructose = 5-dehydro-D-fructose + a ubiquinol.","definition_xrefs":["RHEA:22304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, quinone or similar compound as acceptor","termid":"GO:0016901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"fructose 5-dehydrogenase activity","secondary_identifiers":["MetaCyc:FRUCTOSE-5-DEHYDROGENASE-RXN","KEGG_REACTION:R00873","EC:1.1.5.14"],"synonyms":[{"name":"D-fructose dehydrogenase activity","type":"related"}],"termid":"GO:0047904"}


id: MONDO:0008553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant condition caused by mutation(s) in the GFI1B gene, encoding zinc finger protein Gfi-1b. It is characterized by a tendency for increased bleeding due to abnormal platelet function.","definition_xrefs":["NCIT:C142084"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"platelet-type bleeding disorder 17","secondary_identifiers":["DOID:0111049","MEDGEN:396078","UMLS:C1861194","OMIM:187900","GARD:15117","MESH:C566060"],"synonyms":[{"name":"BDPLT17","type":"exact"},{"name":"GFI1B inherited bleeding disorder, platelet-type","type":"exact"},{"name":"bleeding disorder, platelet-type 17","type":"exact"},{"name":"bleeding disorder, platelet-type, 17","type":"related"},{"name":"hereditary thrombasthenia-thrombocytopenia","type":"exact"},{"name":"inherited bleeding disorder, platelet-type caused by mutation in GFI1B","type":"exact"},{"name":"platelet-type bleeding disorder 17","type":"exact"},{"name":"thrombasthenia-thrombocytopenia, hereditary","type":"related"}],"termid":"MONDO:0008553","xrefs":{"Monarch":{"xref_id":"0008553"}}}


id: MONDO:0010365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fiber-type disproportion myopathy","termid":"MONDO:0009711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myopathy, congenital, with fiber-type disproportion, X-linked","secondary_identifiers":["UMLS:C2749128","MEDGEN:440714","MESH:C567594","DOID:0111226","GARD:15258","OMIM:300580"],"synonyms":[{"name":"CFTDX","type":"exact"},{"name":"myopathy, congenital, with fiber-type disproportion, X-linked","type":"exact"},{"name":"myopathy, congenital, with fiber-type disproportion, X-linked, X-linked dominant","type":"exact"}],"termid":"MONDO:0010365","xrefs":{"Monarch":{"xref_id":"0010365"}}}


id: PBO:0085935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mRNA identified as translated by ribosome profiling data; SWAT-GFP and mCherry fusion proteins localize to the cytosol; partially overlaps the verified ORF YDL010W; YDL009C is not an essential gene","termid":"PBO:0085935"}


id: PBO:0044966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase 12","termid":"PBO:0044966"}


id: MONDO:0014472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary periodic fever syndrome","termid":"MONDO:0017953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"periodic fever-infantile enterocolitis-autoinflammatory syndrome","secondary_identifiers":["MEDGEN:863504","NORD:1939","OMIM:616050","NANDO:2200459","Orphanet:436166","GARD:17725","NANDO:1200994","UMLS:C4015067"],"synonyms":[{"name":"AIFEC","type":"related"},{"name":"AUTOINFLAMMATION with infantile enterocolitis","type":"related"},{"name":"Autoinflammation with Infantile Enterocolitis","type":"exact"},{"name":"NLRC4-related MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with MAS","type":"exact"},{"name":"NLRC4-related autoinflammatory syndrome with macrophage activation syndrome","type":"exact"},{"name":"NLRC4-related infantile enterocolitis-autoinflammatory syndrome","type":"exact"},{"name":"NLRC4-related macrophage activation syndrome","type":"exact"},{"name":"autoinflammation with infantile enterocolitis","type":"exact"}],"termid":"MONDO:0014472","xrefs":{"Monarch":{"xref_id":"0014472"}}}


id: MONDO:0016209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign nocturnal alternating hemiplegia of childhood is a rare neurologic disease characterized by recurrent attacks of nocturnal screaming or crying followed or accompanied by unilateral or sometimes bilateral hemiplegia. Disorder is not associated with neurological or developmental impairments but may be associated with mild behavioral abnormalities.","definition_xrefs":["Orphanet:209973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alternating hemiplegia","termid":"MONDO:0016210"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"benign familial nocturnal alternating hemiplegia of childhood","secondary_identifiers":["MEDGEN:1668716","GARD:20445","UMLS:C4749822","icd11.foundation:447920235"],"synonyms":[{"name":"benign familial nocturnal alternating hemiplegia in childhood","type":"exact"},{"name":"benign nocturnal alternating hemiplegia of childhood","type":"related"}],"termid":"MONDO:0016209","xrefs":{"Monarch":{"xref_id":"0016209"}}}


id: GO:0031532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that is carried out at the cellular level which results in dynamic structural changes to the arrangement of constituent parts of cytoskeletal structures comprising actin filaments and their associated proteins.","definition_xrefs":["GOC:ecd","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete actin cytoskeleton reorganization (obsolete GO:0031532)","synonyms":[{"name":"actin cytoskeleton remodeling","type":"exact"},{"name":"actin cytoskeleton reorganisation","type":"exact"}],"termid":"GO:0031532"}


id: GO:0033970
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-oxo-3-ureidopropanoate + H2O = H+ + malonate + urea.","definition_xrefs":["RHEA:17361","EC:3.5.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"N-malonylurea hydrolase activity","secondary_identifiers":["KEGG_REACTION:R07629","MetaCyc:3.5.1.95-RXN"],"synonyms":[{"name":"3-oxo-3-ureidopropanoate amidohydrolase (urea- and malonate-forming) activity","type":"related"},{"name":"ureidomalonase activity","type":"related"}],"termid":"GO:0033970"}


id: PBO:0050678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 8 pseudogene 5","termid":"PBO:0050678"}


id: PBO:0049669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 1","termid":"PBO:0049669"}


id: GO:0034237
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or both of the regulatory subunits of protein kinase A.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase A binding","termid":"GO:0051018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"protein kinase A regulatory subunit binding","synonyms":[{"name":"PKA regulatory subunit binding","type":"exact"},{"name":"protein kinase A anchoring activity","type":"related"}],"termid":"GO:0034237"}


id: GO:0034751
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as an aryl hydrocarbon (Ah) receptor. Cytosolic and nuclear Ah receptor complexes have different subunit composition, but both contain the ligand-binding subunit AhR.","definition_xrefs":["GOC:mah","PMID:7598497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor complex","termid":"GO:0043235"},{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"aryl hydrocarbon receptor complex","synonyms":[{"name":"AHRC","type":"exact"},{"name":"AhR complex","type":"exact"}],"termid":"GO:0034751"}


id: MONDO:0018900
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Corticosteroid-sensitive aseptic abscesses syndrome is a well-defined entity within the group of autoinflammatory disorders.","definition_xrefs":["Orphanet:54251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"corticosteroid-sensitive aseptic abscess syndrome","secondary_identifiers":["GARD:10946","SCTID:720751000","UMLS:C4303863","MEDGEN:929532"],"synonyms":[{"name":"aseptic abscesses syndrome","type":"exact"},{"name":"aseptic systemic abscesses","type":"exact"},{"name":"corticosteroid-sensitive aseptic abscesses","type":"related"},{"name":"disseminated aseptic abscesses","type":"exact"}],"termid":"MONDO:0018900","xrefs":{"Monarch":{"xref_id":"0018900"}}}


id: GO:1990661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of a S100A8 dimer and capable of binding to toll-like receptor 4 (TLR4).","definition_xrefs":["PMID:25417112","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"S100A8 complex","synonyms":[{"name":"S100A8 homodimer","type":"exact"}],"termid":"GO:1990661"}


id: GO:1902186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of viral release from host cell.","definition_xrefs":["PMID:18305167","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of viral release from host cell (obsolete GO:1902186)","synonyms":[{"name":"regulation of release of virus from host","type":"exact"},{"name":"regulation of viral exit","type":"exact"},{"name":"regulation of viral release","type":"exact"},{"name":"regulation of viral shedding","type":"exact"}],"termid":"GO:1902186"}


id: PBO:0079032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 1-5","termid":"PBO:0079032"}


id: PBO:0075137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide A'","termid":"PBO:0075137"}


id: GO:1902183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of shoot apical meristem development.","definition_xrefs":["GOC:TermGenie","PMID:21496644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meristem development","termid":"GO:0048509"},{"relation_name":"regulates","term_name":"shoot apical meristem development","termid":"GO:1902182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of shoot apical meristem development","synonyms":[{"name":"regulation of SAM development","type":"exact"},{"name":"regulation of primary shoot meristem development","type":"related"},{"name":"regulation of promeristem development","type":"broad"}],"termid":"GO:1902183"}


id: PBO:0057747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1827","termid":"PBO:0057747"}


id: PBO:0081306
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 90 pseudogene 1","termid":"PBO:0081306"}


id: GO:0080170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which hydrogen peroxide is transported across a membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"hydrogen peroxide transmembrane transport","synonyms":[{"name":"hydrogen peroxide membrane transport","type":"exact"}],"termid":"GO:0080170"}


id: MOD:00152
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S'-(8alpha-FAD)-L-cystine.","definition_xrefs":["Unimod:50#C","RESID:AA0143","PubMed:10220347"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FAD modified residue","termid":"MOD:00895"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"S-(8alpha-FAD)-L-cysteine","synonyms":[{"name":"(2R)-2-amino-3-[8alpha-riboflavin 5'-(trihydrogen diphosphate) 5'->5'-ester with adenosine]sulfanylpropanoic acid","type":"exact"},{"name":"8alpha-(S-cysteinyl)FAD","type":"exact"},{"name":"FAD","type":"related"},{"name":"Flavin adenine dinucleotide","type":"related"},{"name":"MOD_RES S-8alpha-FAD cysteine","type":"exact"},{"name":"S-(8alpha-FAD)-L-cysteine","type":"exact"},{"name":"S8aFADCys","type":"exact"}],"termid":"MOD:00152"}


id: GO:0071259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnetic stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to magnetism","termid":"GO:0071000"},{"relation_name":"is_a","term_name":"cellular response to abiotic stimulus","termid":"GO:0071214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to magnetism","synonyms":[{"name":"cellular response to magnetic stimulus","type":"exact"}],"termid":"GO:0071259"}


id: GO:0005937
data:
  {"annotated_genes":["SJAG_03453","SJAG_01017","SJAG_04100","SJAG_01943","SJAG_00938","SJAG_03444","SJAG_04703","SJAG_02700","SJAG_00514","SJAG_01993","SJAG_00667","SJAG_01732","SJAG_04723","SJAG_01171","SJAG_04887","SJAG_02989","SJAG_04001","SJAG_04781","SJAG_00663","SJAG_03596","SJAG_01215","SJAG_02228","SJAG_00185","SJAG_04901","SJAG_02924","SJAG_00700","SJAG_04509","SJAG_05285","SJAG_05001","SJAG_02379","SJAG_01769","SJAG_02718","SJAG_01978","SJAG_00279","SJAG_00870","SJAG_04982","SJAG_01888","SJAG_02351","SJAG_01794","SJAG_04470","SJAG_03145","SJAG_02486","SJAG_03357","SJAG_02169","SJAG_03011","SJAG_03646","SJAG_00677","SJAG_03688","SJAG_02222"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[113417],"is_not":false,"summary":null,"term":"GO:0005937"},{"annotations":[110164,95832,110103,90282,113368,92848,121646,103960,97378,103961,118232,94519,96026,102169,91100,101563,116678],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990819"},{"annotations":[90144,100991],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070250"},{"annotations":[102130,118026,96510,108036],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032175"},{"annotations":[89893,117873,77518,80651,92723,92677,108129,109191,74134,94592,108890,99924,100907,111097,98873,116379,75903,79734,99730,105266,72098,78267,110886],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0043332"},{"annotations":[98386,112240],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070867"}]},"cv_name":"cellular_component","definition":"The projection formed by unicellular fungi in response to mating pheromone.","definition_xrefs":["GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00279":null,"SJAG_00514":null,"SJAG_00663":null,"SJAG_00667":null,"SJAG_00677":null,"SJAG_00700":null,"SJAG_00870":null,"SJAG_00938":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01215":null,"SJAG_01732":null,"SJAG_01769":null,"SJAG_01794":null,"SJAG_01888":null,"SJAG_01943":null,"SJAG_01978":null,"SJAG_01993":null,"SJAG_02169":null,"SJAG_02222":null,"SJAG_02228":null,"SJAG_02351":null,"SJAG_02379":null,"SJAG_02486":null,"SJAG_02700":null,"SJAG_02718":null,"SJAG_02924":null,"SJAG_02989":null,"SJAG_03011":null,"SJAG_03145":null,"SJAG_03357":null,"SJAG_03444":null,"SJAG_03453":null,"SJAG_03596":null,"SJAG_03646":null,"SJAG_03688":null,"SJAG_04001":null,"SJAG_04100":null,"SJAG_04470":null,"SJAG_04509":null,"SJAG_04703":null,"SJAG_04723":null,"SJAG_04781":null,"SJAG_04887":null,"SJAG_04901":null,"SJAG_04982":null,"SJAG_05001":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"mating projection","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:36148799":null},"synonyms":[{"name":"conjugation tube","type":"narrow"},{"name":"shmoo","type":"narrow"}],"termid":"GO:0005937","terms_by_termid":{"GO:0005937":null,"GO:0032175":null,"GO:0043332":null,"GO:0070250":null,"GO:0070867":null,"GO:1990819":null}}


id: PBO:0046340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase family member 5","termid":"PBO:0046340"}


id: GO:0071232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histidine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to amino acid stimulus","termid":"GO:0071230"},{"relation_name":"is_a","term_name":"response to histidine","termid":"GO:0080052"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to histidine","termid":"GO:0071232"}


id: PBO:0034141
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-existence_overlaps","termid":"PBO:0034141"}


id: MONDO:0024345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pityriasis streptogenes (obsolete MONDO:0024345)","secondary_identifiers":["SCTID:200994002","ICD9:696.5"],"termid":"MONDO:0024345","xrefs":{"Monarch":{"xref_id":"0024345"}}}


id: GO:0031890
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a vasoactive intestinal polypeptide receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"vasoactive intestinal polypeptide receptor binding","synonyms":[{"name":"VIP receptor binding","type":"exact"},{"name":"vasoactive intestinal polypeptide receptor ligand","type":"narrow"}],"termid":"GO:0031890"}


id: MONDO:0022460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia cleft lip palate hypothalamic disorder (obsolete MONDO:0022460)","termid":"MONDO:0022460","xrefs":{"Monarch":{"xref_id":"0022460"}}}


id: MONDO:0800028
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare paroxysmal movement disorder, with childhood or adolescent onset, characterized by paroxysmal choreiform, dystonic, and myoclonic movements involving the limbs (mostly distal upper limbs), neck and/or face, which can progressively increase in both frequency and severity until they become nearly constant. Patients may also present with delayed motor milestones, perioral and periorbital dyskinesias, dysarthria, hypotonia, and weakness.","definition_xrefs":["Orphanet:324588"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"dyskinesia with orofacial involvement","termid":"MONDO:0031115"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyskinesia with orofacial involvement, autosomal dominant","secondary_identifiers":["OMIM:606703","MEDGEN:1790407","SCTID:763352005","UMLS:C5551343","ICD10CM:G51.4","GARD:12722","MESH:C564676"],"synonyms":[{"name":"ADCY5-related dyskinesia","type":"related"},{"name":"FDFM","type":"exact"},{"name":"dyskinesia, familial, with facial myokymia","type":"exact"}],"termid":"MONDO:0800028","xrefs":{"Monarch":{"xref_id":"0800028"}}}


id: FYPO:0005206
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:21965528","PMID:689088","PMID:872891","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"abnormal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"abnormal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"abnormal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005206"}


id: PBO:0070885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L15 pseudogene 17","termid":"PBO:0070885"}


id: GO:0046237
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of phenanthrene, a tricyclic aromatic hydrocarbon.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete phenanthrene biosynthetic process (obsolete GO:0046237)","synonyms":[{"name":"phenanthrene anabolism","type":"exact"},{"name":"phenanthrene biosynthesis","type":"exact"},{"name":"phenanthrene biosynthetic process","type":"exact"},{"name":"phenanthrene formation","type":"exact"},{"name":"phenanthrene synthesis","type":"exact"}],"termid":"GO:0046237"}


id: PBO:0004366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKC subfamily","termid":"PBO:0004366"}


id: PBO:0078738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 1 like","termid":"PBO:0078738"}


id: GO:1904986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of quinolinate biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:bf","GO_REF:0000058","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of quinolinate biosynthetic process","termid":"GO:1904984"},{"relation_name":"positively_regulates","term_name":"quinolinate biosynthetic process","termid":"GO:0019805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of quinolinate biosynthetic process","synonyms":[{"name":"activation of quinolinate anabolism","type":"narrow"},{"name":"activation of quinolinate biosynthesis","type":"narrow"},{"name":"activation of quinolinate biosynthetic process","type":"narrow"},{"name":"activation of quinolinate formation","type":"narrow"},{"name":"activation of quinolinate synthesis","type":"narrow"},{"name":"positive regulation of quinolinate anabolism","type":"exact"},{"name":"positive regulation of quinolinate biosynthesis","type":"exact"},{"name":"positive regulation of quinolinate formation","type":"exact"},{"name":"positive regulation of quinolinate synthesis","type":"exact"},{"name":"up regulation of quinolinate anabolism","type":"exact"},{"name":"up regulation of quinolinate biosynthesis","type":"exact"},{"name":"up regulation of quinolinate biosynthetic process","type":"exact"},{"name":"up regulation of quinolinate formation","type":"exact"},{"name":"up regulation of quinolinate synthesis","type":"exact"},{"name":"up-regulation of quinolinate anabolism","type":"exact"},{"name":"up-regulation of quinolinate biosynthesis","type":"exact"},{"name":"up-regulation of quinolinate biosynthetic process","type":"exact"},{"name":"up-regulation of quinolinate formation","type":"exact"},{"name":"up-regulation of quinolinate synthesis","type":"exact"},{"name":"upregulation of quinolinate anabolism","type":"exact"},{"name":"upregulation of quinolinate biosynthesis","type":"exact"},{"name":"upregulation of quinolinate biosynthetic process","type":"exact"},{"name":"upregulation of quinolinate formation","type":"exact"},{"name":"upregulation of quinolinate synthesis","type":"exact"}],"termid":"GO:1904986"}


id: MOD:01685
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino group with a alpha-palmitoylamino group.","definition_xrefs":["Unimod:47#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-palmitoylated residue","termid":"MOD:00651"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"alpha-amino palmitoylated residue","synonyms":[{"name":"N2PamRes","type":"exact"},{"name":"Palmitoyl","type":"related"},{"name":"Palmitoylation","type":"related"}],"termid":"MOD:01685"}


id: PBO:0069974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1269, pseudogene","termid":"PBO:0069974"}


id: PBO:0028223
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_splice_site_specificity","termid":"PBO:0028223"}


id: PBO:0084364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lipase with specificity for monoacylglycerol; preferred substrate is 1-oleoylglycerol; null mutation affects lipid droplet morphology and overexpression causes increased accumulation of reactive oxygen species","termid":"PBO:0084364"}


id: GO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized features of a photoreceptor cell, as found in the eye, the primary visual organ of most organisms.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"photoreceptor cell differentiation","termid":"GO:0046530"},{"relation_name":"part_of","term_name":"eye morphogenesis","termid":"GO:0048592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eye photoreceptor cell differentiation","termid":"GO:0001754"}


id: GO:0002048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving the siderochrome pyoverdine.","definition_xrefs":["PMID:15317763"],"gene_count":0,"genotype_count":0,"name":"obsolete pyoverdine metabolic process (obsolete GO:0002048)","synonyms":[{"name":"pyoverdine metabolism","type":"exact"}],"termid":"GO:0002048"}


id: GO:0046115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of guanine, guanine riboside, a nucleoside with a wide species distribution.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine metabolic process","termid":"GO:0008617"},{"relation_name":"is_a","term_name":"guanosine-containing compound catabolic process","termid":"GO:1901069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"guanosine catabolic process","secondary_identifiers":["GO:0006160"],"synonyms":[{"name":"guanosine breakdown","type":"exact"},{"name":"guanosine catabolism","type":"exact"},{"name":"guanosine degradation","type":"exact"},{"name":"guanosine phosphorolysis","type":"related"}],"termid":"GO:0046115"}


id: PBO:0066599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member Q pseudogene 2","termid":"PBO:0066599"}


id: PBO:0077249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 2","termid":"PBO:0077249"}


id: PATO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001211 solid_angle_quantity (obsolete PATO:0001211)","termid":"PATO:0001211"}


id: MONDO:0000632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing neoplasm that arises from the uterine corpus or the cervix. Representative examples include leiomyoma, adenomyoma, and endocervical polyp.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign female reproductive system neoplasm","termid":"MONDO:0000624"},{"relation_name":"is_a","term_name":"tumor of uterus","termid":"MONDO:0021353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uterine benign neoplasm","secondary_identifiers":["ICD9:219.8","NCIT:C3609","SCTID:92470003","DOID:0060095","MEDGEN:57809","UMLS:C0153999","ICD9:219.9"],"synonyms":[{"name":"Uterous neoplasms, benign","type":"exact"},{"name":"Uterous tumors, benign","type":"exact"},{"name":"benign neoplasm of the uterus","type":"exact"},{"name":"benign neoplasm of uterus","type":"exact"},{"name":"benign tumor of the uterus","type":"exact"},{"name":"benign tumor of uterus","type":"exact"},{"name":"benign tumour of the uterus","type":"exact"},{"name":"benign tumour of uterus","type":"exact"},{"name":"benign uterine neoplasm","type":"exact"},{"name":"benign uterine neoplasms","type":"exact"},{"name":"benign uterine tumor","type":"exact"},{"name":"benign uterine tumors","type":"exact"},{"name":"benign uterine tumour","type":"exact"},{"name":"benign uterine tumours","type":"exact"},{"name":"benign uterus neoplasm","type":"exact"},{"name":"benign uterus neoplasms","type":"exact"},{"name":"benign uterus tumor","type":"exact"},{"name":"benign uterus tumors","type":"exact"},{"name":"benign uterus tumour","type":"exact"},{"name":"benign uterus tumours","type":"exact"},{"name":"uterine neoplasms, benign","type":"exact"},{"name":"uterine tumors, benign","type":"exact"},{"name":"uterus benign neoplasm","type":"exact"}],"termid":"MONDO:0000632","xrefs":{"Monarch":{"xref_id":"0000632"}}}


id: MONDO:0008821
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis, distal, with intellectual disability and characteristic facies","secondary_identifiers":["OMIM:208081","MESH:C565940","UMLS:C5882782","MEDGEN:1844539"],"synonyms":[{"name":"arthrogryposis, distal, with intellectual disability and characteristic facies","type":"exact"},{"name":"arthrogryposis, distal, with mental retardation and characteristic facies","type":"exact"}],"termid":"MONDO:0008821","xrefs":{"Monarch":{"xref_id":"0008821"}}}


id: MONDO:0004898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary choroidal atrophy","termid":"MONDO:0004883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"total circumpapillary dystrophy of choroid","secondary_identifiers":["SCTID:59753003","ICD9:363.52","MEDGEN:509705","UMLS:C0154896","DOID:9842"],"synonyms":[{"name":"circumpapillary dystrophy of choroid, total","type":"exact"}],"termid":"MONDO:0004898","xrefs":{"Monarch":{"xref_id":"0004898"}}}


id: GO:0061359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the activity of the Wnt signaling pathway by the controlled release of a Wnt protein from a cell.","definition_xrefs":["GOC:bf","GOC:jl","PMID:19223472"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Wnt signaling pathway by Wnt protein secretion (obsolete GO:0061359)","synonyms":[{"name":"regulation of Wnt receptor signaling pathway by Wnt protein secretion","type":"exact"},{"name":"regulation of Wnt receptor signalling pathway by Wnt protein secretion","type":"exact"},{"name":"regulation of Wnt-activated signaling pathway by Wnt protein secretion","type":"exact"}],"termid":"GO:0061359"}


id: GO:1905951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any DNA recombination that takes place in mitochondrion.","definition_xrefs":["GO_REF:0000062","PMID:8087883","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA recombination","termid":"GO:0006310"},{"relation_name":"is_a","term_name":"mitochondrial DNA metabolic process","termid":"GO:0032042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"mitochondrion DNA recombination","synonyms":[{"name":"DNA recombination in mitochondria","type":"exact"}],"termid":"GO:1905951"}


id: MONDO:0010887
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anterior cervical hypertrichosis is a rare form of localized hypertrichosis characterized by hair growth near the laryngeal prominence during childhood.","definition_xrefs":["Orphanet:3387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrichosis","termid":"MONDO:0019280"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated anterior cervical hypertrichosis","secondary_identifiers":["MESH:C538390","SCTID:717963001","UMLS:C1838123","GARD:8438","MEDGEN:325346","OMIM:600457"],"synonyms":[{"name":"Tsukahara Kajii syndrome","type":"related"},{"name":"Tsukahara-Kajii syndrome","type":"exact"},{"name":"anterior cervical hypertrichosis","type":"related"},{"name":"hairy throat","type":"related"},{"name":"hairy throat syndrome","type":"exact"},{"name":"hypertrichosis, anterior cervical","type":"related"}],"termid":"MONDO:0010887","xrefs":{"Monarch":{"xref_id":"0010887"}}}


id: PBO:0088818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA/mRNA dihydrouridine synthase Dus4","termid":"PBO:0088818"}


id: FYPO:0004460
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more regulation of mitotic cell cycle RNAs measured in a cell is lower than normal (i.e. lower than observed in wild-type cells) when the cell is subject to nitrogen starvation. Regulation of mitotic cell cycle RNAs are transcribed from genes whose products are involved in regulation of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during nitrogen starvation","termid":"FYPO:0001152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","synonyms":[{"name":"decreased level of mitotic cell cycle regulation gene mRNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene RNA during nitrogen starvation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen depletion","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene mRNA during nitrogen deprivation","type":"exact"},{"name":"decreased level of regulation of mitotic cell cycle gene transcripts nitrogen starvation","type":"exact"},{"name":"decreased regulation of mitotic cell cycle gene mRNA accumulation during nitrogen starvation","type":"related"},{"name":"reduced level of regulation of mitotic cell cycle gene mRNA during nitrogen starvation","type":"exact"}],"termid":"FYPO:0004460"}


id: PBO:0065133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein activator of interferon induced protein kinase EIF2AK2","termid":"PBO:0065133"}


id: GO:0050417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + L-glutamine = NH3 + L-glutamate; and H2O + L-asparagine = NH3 + L-aspartate.","definition_xrefs":["EC:3.5.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"glutamin-(asparagin-)ase activity","synonyms":[{"name":"L-ASNase/L-GLNase activity","type":"related"},{"name":"L-asparagine/L-glutamine amidohydrolase activity","type":"related"},{"name":"L-glutamine(L-asparagine) amidohydrolase activity","type":"related"},{"name":"glutaminase-(asparagin-)ase activity","type":"exact"},{"name":"glutaminase-asparaginase activity","type":"related"}],"termid":"GO:0050417"}


id: PBO:0060458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAIP pseudogene 1","termid":"PBO:0060458"}


id: GO:0050929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that initiates the directed movement of a motile cell or organism towards a lower concentration in a concentration gradient of a specific chemical.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of negative chemotaxis","termid":"GO:0050924"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"induction of negative chemotaxis","termid":"GO:0050929"}


id: MONDO:0008033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Autosomal dominant limb-girdle muscular dystrophy type 1B (LGMD1B) is a subtype of autosomal dominant limb girdle muscular dystrophy characterized by a variable age of onset of progressive shoulder and hip girdle weakness, with inferior limbs usually being affected prior to upper limbs, and mild joint contractures. LGMD1B is also associated with cardiac dysrhythmias, including atrioventricular conduction blocks, and late-onset dilated cardiomyopathy, that may lead to sudden death.","definition_xrefs":["Orphanet:264"],"gene_count":0,"genotype_count":0,"name":"obsolete autosomal dominant limb-girdle muscular dystrophy type 1B (obsolete MONDO:0008033)","termid":"MONDO:0008033","xrefs":{"Monarch":{"xref_id":"0008033"}}}


id: PBO:0043326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDC like kinase 3","termid":"PBO:0043326"}


id: MONDO:0017518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of toes","termid":"MONDO:0017452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of toes, bilateral","secondary_identifiers":["MEDGEN:1702894","icd11.foundation:357312922","Orphanet:295134","UMLS:C5229808"],"synonyms":[{"name":"short toes, bilateral","type":"exact"}],"termid":"MONDO:0017518","xrefs":{"Monarch":{"xref_id":"0017518"}}}


id: GO:2000259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein activation cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein maturation","termid":"GO:1903319"},{"relation_name":"is_a","term_name":"regulation of protein activation cascade","termid":"GO:2000257"},{"relation_name":"positively_regulates","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"positive regulation of protein activation cascade","synonyms":[{"name":"positive regulation of protein activation pathway","type":"exact"},{"name":"positive regulation of protein activitory cascade","type":"exact"}],"termid":"GO:2000259"}


id: GO:0046573
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of lactone rings (intramolecular cyclic esters) to produce a hydroxyl group and a carboxyl group.","definition_xrefs":["PMID:11640988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"lactonohydrolase activity","termid":"GO:0046573"}


id: PBO:0058762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6886","termid":"PBO:0058762"}


id: GO:0045472
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a ether stimulus.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to ether","termid":"GO:0045472"}


id: PBO:0058368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4740","termid":"PBO:0058368"}


id: MONDO:0015212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A intestinal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic intestinal malformation (obsolete MONDO:0015212)","secondary_identifiers":["Orphanet:108969"],"synonyms":[{"name":"syndrome associated with intestinal malformation","type":"exact"},{"name":"syndromic intestinal malformation","type":"exact"}],"termid":"MONDO:0015212","xrefs":{"Monarch":{"xref_id":"0015212"}}}


id: PBO:0005488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H2B Htb1","termid":"PBO:0005488"}


id: MONDO:0020793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngodistal myopathy","termid":"MONDO:0025193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngodistal myopathy 1","secondary_identifiers":["UMLS:C5231388","GARD:15097","OMIM:164310","DOID:0081297","NANDO:1200219","MEDGEN:1684682"],"synonyms":[{"name":"OPDM1","type":"exact"},{"name":"faciooculolaryngopharyngeal myopathy with distal and respiratory involvement","type":"exact"},{"name":"oculopharyngodistal myopathy","type":"broad"},{"name":"oculopharyngodistal myopathy 1","type":"exact"}],"termid":"MONDO:0020793","xrefs":{"Monarch":{"xref_id":"0020793"}}}


id: GO:0019768
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with high affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgE receptor activity","termid":"GO:0019767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"high-affinity IgE receptor activity","synonyms":[{"name":"high affinity Fc receptor activity","type":"related"},{"name":"high affinity IgE receptor activity","type":"exact"}],"termid":"GO:0019768"}


id: GO:0004216
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of peptide bonds. Has a broad proteolytic activity. With small-molecule substrates and inhibitors, the major determinant of specificity is P2, which is preferably Leu, Met > Phe, and not Arg.","definition_xrefs":["EC:3.4.22.38"],"gene_count":0,"genotype_count":0,"name":"obsolete cathepsin K activity (obsolete GO:0004216)","synonyms":[{"name":"cathepsin K activity","type":"exact"},{"name":"cathepsin O activity","type":"related"},{"name":"cathepsin O2 activity","type":"related"},{"name":"cathepsin X activity","type":"related"}],"termid":"GO:0004216"}


id: PBO:0075597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPNS lysolipid transporter 1, lysophospholipid","termid":"PBO:0075597"}


id: GO:0002910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of peripheral B cell deletion.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peripheral tolerance induction","termid":"GO:0002660"},{"relation_name":"is_a","term_name":"positive regulation of B cell mediated immunity","termid":"GO:0002714"},{"relation_name":"is_a","term_name":"positive regulation of B cell deletion","termid":"GO:0002869"},{"relation_name":"is_a","term_name":"regulation of peripheral B cell deletion","termid":"GO:0002908"},{"relation_name":"positively_regulates","term_name":"peripheral B cell deletion","termid":"GO:0002454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of peripheral B cell deletion","synonyms":[{"name":"activation of peripheral B cell deletion","type":"narrow"},{"name":"stimulation of peripheral B cell deletion","type":"narrow"},{"name":"up regulation of peripheral B cell deletion","type":"exact"},{"name":"up-regulation of peripheral B cell deletion","type":"exact"},{"name":"upregulation of peripheral B cell deletion","type":"exact"}],"termid":"GO:0002910"}


id: PBO:0110029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP144 pseudogene 1","termid":"PBO:0110029"}


id: RO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x develops from y if and only if either (a) x directly develops from y or (b) there exists some z such that x directly develops from z and z develops from y","direct_ancestors":[{"relation_name":"is_a","term_name":"developmentally_preceded_by","termid":"RO:0002258"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"develops_from","termid":"RO:0002202"}


id: SO:0000376
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A small (184-nt in E. coli) RNA that forms a hairpin type structure. 6S RNA associates with RNA polymerase in a highly specific manner. 6S RNA represses expression from a sigma70-dependent promoter during stationary phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"small_regulatory_ncRNA","termid":"SO:0000370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_6S","secondary_identifiers":["http://en.wikipedia.org/wiki/6S_RNA"],"synonyms":[{"name":"6S RNA","type":"exact"},{"name":"RNA 6S","type":"exact"}],"termid":"SO:0000376"}


id: GO:0052586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which a nitrogenous group, excluding NH and NH2 groups, acts as a hydrogen or electron donor and reduces a quinone or similar compound.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on other nitrogenous compounds as donors, with a quinone or similar compound as acceptor (obsolete GO:0052586)","termid":"GO:0052586"}


id: GO:0044834
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A tetramer of retroviral integrase subunits tightly associated with a pair of viral DNA ends. Functions to insert viral DNA into a host cell chromosome.","definition_xrefs":["PMID:20118915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex","termid":"GO:0032993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"retroviral intasome","termid":"GO:0044834"}


id: PBO:0078924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Arg (anticodon ACG) 1-3","termid":"PBO:0078924"}


id: MONDO:1011432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Beta-mannosidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"peripheral neuropathy, non-human animal","termid":"MONDO:1010239"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"},{"relation_name":"is_a","term_name":"skeletal dysplasia, non-human animal","termid":"MONDO:1012973"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-mannosidosis, non-human animal","secondary_identifiers":["OMIA:000626"],"termid":"MONDO:1011432","xrefs":{"Monarch":{"xref_id":"1011432"}}}


id: PBO:0078242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 22-1 (pseudogene)","termid":"PBO:0078242"}


id: PBO:0055772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LNX1 antisense RNA 1","termid":"PBO:0055772"}


id: PBO:0091909
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Domain of Unknown function protein at the Cortex","termid":"PBO:0091909"}


id: PBO:0080170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 5","termid":"PBO:0080170"}


id: PBO:0062324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 6","termid":"PBO:0062324"}


id: PBO:0058941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial matrix import factor 23","termid":"PBO:0058941"}


id: PBO:0028648
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiosis_I","termid":"PBO:0028648"}


id: FYPO:0005720
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which chromosome recapture is normal (i.e. indistinguishable from wild type) during metaphase of mitosis. Chromosome recapture is the reattachment of chromosomes which have become detached from the spindle.","definition_xrefs":["GO:1990942","PMID:17881496","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal mitotic metaphase chromosome recapture","synonyms":[{"name":"normal chromosome recapture during mitotic metaphase","type":"exact"},{"name":"normal kinetochore retrieval in mitotic metaphase","type":"exact"},{"name":"normal mitotic kinetochore retrieval","type":"exact"},{"name":"normal mitotic metaphase chromosome recapture during vegetative growth","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to SPB","type":"exact"},{"name":"normal mitotic metaphase chromosome retrieval to the spindle pole body","type":"exact"},{"name":"normal mitotic sister kinetochore recapture","type":"exact"}],"termid":"FYPO:0005720"}


id: GO:0009458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A hemeprotein whose characteristic mode of action involves transfer of reducing equivalents associated with a reversible change in oxidation state of the prosthetic group. This redox change involves a single electron, reversible equilibrium between the Fe(II) and Fe(III) states of the central iron atom.","definition_xrefs":["PMID:1655423"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome (obsolete GO:0009458)","synonyms":[{"name":"cytochrome","type":"exact"}],"termid":"GO:0009458"}


id: GO:2000331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of terminal button organization.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of presynapse organization","termid":"GO:0099174"},{"relation_name":"regulates","term_name":"terminal button organization","termid":"GO:0072553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of terminal button organization","synonyms":[{"name":"regulation of bouton organization","type":"exact"},{"name":"regulation of presynaptic bouton organization","type":"exact"},{"name":"regulation of synaptic bouton organization","type":"exact"},{"name":"regulation of terminal bouton organization","type":"exact"},{"name":"regulation of terminal button organisation","type":"exact"}],"termid":"GO:2000331"}


id: PBO:0003440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin","termid":"PBO:0003440"}


id: MONDO:0056798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the vermiform appendix.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"disorder of appendix","secondary_identifiers":["DOID:60000","EFO:0009542","ICD10CM:K35-K38","UMLS:C0267613","SCTID:18526009","MEDGEN:540821","ICD9:543.9"],"synonyms":[{"name":"appendiceal disease","type":"exact"},{"name":"appendix disease","type":"exact"},{"name":"disease of appendix","type":"exact"},{"name":"disease of vermiform appendix","type":"exact"},{"name":"disease or disorder of vermiform appendix","type":"exact"},{"name":"disorder of appendix","type":"exact"},{"name":"disorder of vermiform appendix","type":"exact"},{"name":"vermiform appendix disease","type":"exact"},{"name":"vermiform appendix disease or disorder","type":"exact"}],"termid":"MONDO:0056798","xrefs":{"Monarch":{"xref_id":"0056798"}}}


id: SO:0001278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"1-methylinosine is a modified inosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_inosine","termid":"SO:0001274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"one_methylinosine","secondary_identifiers":["RNAMOD:018"],"synonyms":[{"name":"1-methylinosine","type":"exact"},{"name":"m1I","type":"exact"},{"name":"one methylinosine","type":"exact"}],"termid":"SO:0001278"}


id: GO:0018497
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-chloro-2,2-bis(4-chlorophenyl)ethene + 2 H+ + 2 e- = 1-chloro-2,2-bis(4-chlorophenyl)ethane. 1-chloro-2,2-bis(4-chlorophenyl)ethene is also known as DDMU; 1-chloro-2,2-bis(4-chlorophenyl)ethane is also known as DDMS.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-chloro-2,2-bis(4-chlorophenyl)ethane dehydrogenase activity (obsolete GO:0018497)","synonyms":[{"name":"DDMS dehydrogenase activity","type":"exact"}],"termid":"GO:0018497"}


id: FYECO:0000292
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were first nitrogen starved at standard growth temperature, and then transferred to a rich medium at high temperature.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen starvation at normal temperature and shift to high temperature in rich medium","termid":"FYECO:0000292"}


id: PR:O59666
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A copper-exporting P-type ATPase A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03101","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-transporting ATPase ccc2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.01","secondary_identifiers":["UniProtKB:O59666"],"synonyms":[{"name":"Cu(2+)-ATPase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-copA","type":"exact"}],"termid":"PR:O59666"}


id: GO:1904449
data:
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id: PBO:0071470
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id: PBO:0061130
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id: GO:0030190
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id: GO:0009483
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id: GO:1990309
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id: PBO:0058296
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id: GO:0030418
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id: MONDO:0010692
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id: MONDO:1011562
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id: FYPO:0005554
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id: PBO:0031300
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id: MONDO:0012180
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id: PBO:0066695
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id: GO:0035658
data:
  {"annotated_genes":["SJAG_01367"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93008],"is_not":false,"summary":null,"term":"GO:0035658"}]},"cv_name":"cellular_component","definition":"A protein complex that functions as a guanine nucleotide exchange factor (GEF) and converts Rab-GDP to Rab-GTP. In S. cerevisiae, this complex consists of at least Mon1 and Ccz1, and serves as a GEF for the Rab Ypt7p.","definition_xrefs":["GOC:rb","PMID:20797862"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl-nucleotide exchange factor complex","termid":"GO:0032045"},{"relation_name":"part_of","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01367":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0032991","GO:0005768","GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"Mon1-Ccz1 complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0035658","terms_by_termid":{"GO:0035658":null}}


id: SO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Left handed type II (dihedral angles):- Residue(i): -140 degrees < chi (1) -120 degrees < -20 degrees, +80 degrees < psi +120 degrees < +180 degrees. Residue(i+1): +20 degrees < phi < +140 degrees, -40 degrees < psi < +90 degrees.","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asx_turn","termid":"SO:0000912"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"asx_turn_left_handed_type_two","secondary_identifiers":["BS:00204"],"synonyms":[{"name":"asx turn left handed type two","type":"exact"},{"name":"asx_turn_iil","type":"exact"}],"termid":"SO:0001130"}


id: MOD:01825
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfhydryl hydrogen with a Thermo Scientific cysTMT6plex-128 reporter+balance group.","definition_xrefs":["PubMed:18688235","URL:http://www.piercenet.com/files/2162220.pdf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysTMT6plex reporter+balance reagent cysteine disulfide","termid":"MOD:01821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysTMT6plex-128 reporter+balance reagent cysteine disulfide","synonyms":[{"name":"S-(2-{3-[2-(2,6-dimethylpiperidin-1-yl)acetamido]propanamido}ethyl)sulfanyl","type":"exact"},{"name":"cysTMT6plex","type":"related"},{"name":"cysteine-reactive Sixplex Tandem Mass Tag(TM)","type":"related"}],"termid":"MOD:01825"}


id: PBO:0072631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine and serine rich coiled-coil 1","termid":"PBO:0072631"}


id: PBO:0045970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early growth response 3","termid":"PBO:0045970"}


id: PBO:0072184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17","termid":"PBO:0072184"}


id: PR:A6X977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27E2.13 gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X977"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C27E2.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27E2.13","synonyms":[{"name":"Spom972h-SPAC27E2.13","type":"exact"}],"termid":"PR:A6X977"}


id: GO:1905620
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of alpha-(1->3)-fucosyltransferase activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:15364955"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of alpha-(1->3)-fucosyltransferase activity (obsolete GO:1905620)","synonyms":[{"name":"down regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down regulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"down regulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"down-regulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha-(1->3)-fucosyltransferase activity","type":"exact"},{"name":"downregulation of alpha-1,3-fucosyltransferase activity","type":"exact"},{"name":"inhibition of alpha(1,3)-fucosyltransferase activity","type":"narrow"},{"name":"inhibition of alpha-(1,3)-fucosyltransferase activity","type":"narrow"},{"name":"inhibition of alpha-(1->3)-fucosyltransferase activity","type":"narrow"},{"name":"inhibition of alpha-1,3-fucosyltransferase activity","type":"narrow"},{"name":"negative regulation of alpha(1,3)-fucosyltransferase activity","type":"exact"},{"name":"negative regulation of alpha-(1,3)-fucosyltransferase activity","type":"exact"},{"name":"negative regulation of alpha-1,3-fucosyltransferase activity","type":"exact"}],"termid":"GO:1905620"}


id: FYPO:0004257
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a cell contains more than one nucleus and has a larger volume than normal.","definition_xrefs":["PomBase:mah","PMID:10503548"],"direct_ancestors":[{"relation_name":"has_part","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"has_part","term_name":"swollen vegetative cell","termid":"FYPO:0000646"},{"relation_name":"is_a","term_name":"multinucleate vegetative cell","termid":"FYPO:0000061"},{"relation_name":"is_a","term_name":"swollen vegetative cell","termid":"FYPO:0000646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"swollen multinucleate vegetative cell","synonyms":[{"name":"enlarged multinucleate cell","type":"related"},{"name":"large multinucleate cell","type":"related"},{"name":"multinucleate cell with increased cell size","type":"related"},{"name":"multinucleate cell with increased cell volume","type":"exact"},{"name":"swollen multinucleate cell during vegetative growth","type":"exact"},{"name":"swollen multinucleate vegetative cell during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004257"}


id: PBO:0060440
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 9","termid":"PBO:0060440"}


id: PR:Q9UUD0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19C2.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UUD0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19C2.10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C2.10","synonyms":[{"name":"Spom972h-SPBC19C2.10","type":"exact"}],"termid":"PR:Q9UUD0"}


id: PBO:0027690
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_vegetative_cell_enlarged_around_nucleus","termid":"PBO:0027690"}


id: MONDO:0100285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder of infants in which there is progressive obliteration or discontinuity of the extrahepatic biliary system, resulting in obstruction of bile flow.","definition_xrefs":["OMIM:210500"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biliary atresia","termid":"MONDO:0008867"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"extrahepatic biliary atresia","secondary_identifiers":["UMLS:C4520983","icd11.foundation:1813934523","MEDGEN:1621383","NCIT:C97069","GARD:886"],"synonyms":[{"name":"EHBA","type":"exact"},{"name":"biliary atresia, extrahepatic","type":"exact"}],"termid":"MONDO:0100285","xrefs":{"Monarch":{"xref_id":"0100285"}}}


id: PBO:0060841
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofilament light chain","termid":"PBO:0060841"}


id: MONDO:0007398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniorhiny","secondary_identifiers":["UMLS:C1852501","MESH:C565144","OMIM:123050","icd11.foundation:853619848","MEDGEN:338944","Orphanet:157832","GARD:16984"],"synonyms":[{"name":"craniorhiny","type":"exact"}],"termid":"MONDO:0007398","xrefs":{"Monarch":{"xref_id":"0007398"}}}


id: GO:0033484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of nitric oxide within a cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular nitric oxide homeostasis","synonyms":[{"name":"NO homeostasis","type":"broad"},{"name":"cellular nitric oxide homeostasis","type":"exact"},{"name":"nitric oxide homeostasis","type":"broad"}],"termid":"GO:0033484"}


id: MONDO:0008766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amaurosis hypertrichosis is characterized by severe retinal dystrophy marked by visual impairment and profound photophobia without night blindness. Eye examination suggested a cone-rod type of congenital amaurosis. Trichomegaly, bushy eyebrows with synophyrys, and excessive facial and body hair were also reported. The syndrome has been described in two female cousins both born to consanguineous parents.","definition_xrefs":["Orphanet:1021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"amaurosis-hypertrichosis syndrome","secondary_identifiers":["MESH:C536604","OMIM:204110","MEDGEN:341805","SCTID:720983002","UMLS:C1857588","GARD:637","ICD10CM:H35.5"],"synonyms":[{"name":"amaurosis congenita cone-rod type with congenital hypertrichosis","type":"related"},{"name":"amaurosis congenita, cone-rod type, with congenital hypertrichosis","type":"related"}],"termid":"MONDO:0008766","xrefs":{"Monarch":{"xref_id":"0008766"}}}


id: PR:G2TRN6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC750.01 gene.","definition_xrefs":["UniProtKB:G2TRN6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl-alcohol dehydrogenase C750.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC750.01","synonyms":[{"name":"Spom972h-SPAC750.01","type":"exact"}],"termid":"PR:G2TRN6"}


id: MONDO:0045037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An opportunistic infection caused by a heterogeneous group of mitosporic fungi with clear (hyalo-) hyphae in the host. Common causative agents include acremonium; aspergillus; chrysosporium; fusarium; paecilomyces; penicillium; pseudallescheria; scedosporium; and scopulariopsis. Normally a dermatomycoses, it can become invasive in the immunocompromised host.","definition_xrefs":["MESH:D060605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyalohyphomycosis","secondary_identifiers":["MEDGEN:452455","UMLS:C0343952","SCTID:240773008"],"synonyms":[{"name":"hyalohyphomycosis","type":"exact"}],"termid":"MONDO:0045037","xrefs":{"Monarch":{"xref_id":"0045037"}}}


id: PBO:0042388
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD300H molecule (gene/pseudogene)","termid":"PBO:0042388"}


id: PBO:0062204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily A member 1","termid":"PBO:0062204"}


id: GO:0044270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organic and inorganic nitrogenous compounds.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular nitrogen compound catabolic process (obsolete GO:0044270)","termid":"GO:0044270"}


id: GO:0090288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a growth factor stimulus.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to growth factor stimulus","termid":"GO:0090287"},{"relation_name":"negatively_regulates","term_name":"cellular response to growth factor stimulus","termid":"GO:0071363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to growth factor stimulus","termid":"GO:0090288"}


id: MOD:00380
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide).","definition_xrefs":["PubMed:14725769","Unimod:424#D","PubMed:12910261","RESID:AA0375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molybdopterin guanine dinucleotide","termid":"MOD:01167"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-aspartic acid residue","termid":"MOD:02066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","synonyms":[{"name":"2-amino-5,6-dimercapto-7-methyl-3,7,8a,9-tetrahydro-8-oxa-1,3,9,10-tetraazaanthracen-4-one guanosine dinucleotide","type":"exact"},{"name":"L-aspartyl molybdenum bis(molybdopterin guanine dinucleotide)","type":"exact"},{"name":"MolybdopterinGD","type":"related"},{"name":"bis[8-amino-1a,2,4a,5,6,7,10-heptahydro-2-(trihydrogen diphosphate 5'-ester with guanosine)methyl-6-oxo-3,4-disulfanyl-pteridino[6,7-5,6]pyranoato-S3,S4]-aspartyl-molybdenum","type":"exact"},{"name":"molybdenum bis(molybdopterin guanine dinucleotide)","type":"related"},{"name":"nitrate reductase A aspartyl Mo-bisMGD cofactor","type":"exact"},{"name":"phosphoric acid 4-(2-amino-4-oxo-3,4,5,6,-tetrahydro-pteridin-6-yl)-2-hydroxy-3,4-dimercapto-but-3-en-yl ester guanylate ester","type":"exact"}],"termid":"MOD:00380"}


id: PBO:0017717
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pol1 promoter region contains 5 near matches to the MluI cell cycle box (MCB) consensus sequence","termid":"PBO:0017717"}


id: MOD:01333
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C labeled L-isoleucine.","definition_xrefs":["PubMed:12716131","Unimod:188#I","PubMed:12766232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"6x(13)C labeled residue","termid":"MOD:00544"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C labeled L-isoleucine","synonyms":[{"name":"13C(6) Silac label","type":"related"},{"name":"Label:13C(6)","type":"related"}],"termid":"MOD:01333"}


id: GO:0030879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the mammary gland over time, from its formation to the mature structure. The mammary gland is a large compound sebaceous gland that in female mammals is modified to secrete milk. Its development starts with the formation of the mammary line and ends as the mature gland cycles between nursing and weaning stages.","definition_xrefs":["PMID:9576833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland development","termid":"GO:0048732"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mammary gland development","synonyms":[{"name":"mammogenesis","type":"narrow"}],"termid":"GO:0030879"}


id: PBO:0044383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily A member 7","termid":"PBO:0044383"}


id: GO:0032224
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of cholinergic synaptic transmission, the process of communication from a neuron to another neuron across a synapse using the neurotransmitter acetylcholine.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic transmission, cholinergic","termid":"GO:0032222"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"positively_regulates","term_name":"synaptic transmission, cholinergic","termid":"GO:0007271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of synaptic transmission, cholinergic","synonyms":[{"name":"activation of synaptic transmission, cholinergic","type":"narrow"},{"name":"stimulation of synaptic transmission, cholinergic","type":"narrow"},{"name":"up regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"up-regulation of synaptic transmission, cholinergic","type":"exact"},{"name":"upregulation of synaptic transmission, cholinergic","type":"exact"}],"termid":"GO:0032224"}


id: PBO:0014237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis ATPase","termid":"PBO:0014237"}


id: PBO:0001383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Polo kinase Plo1","termid":"PBO:0001383"}


id: GO:0008838
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-diaminopropionate + H2O = pyruvate + 2 NH3.","definition_xrefs":["EC:4.3.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"diaminopropionate ammonia-lyase activity","secondary_identifiers":["MetaCyc:4.3.1.15-RXN"],"synonyms":[{"name":"2,3-diaminopropionate ammonia-lyase (adding H2O; pyruvate-forming)","type":"related"},{"name":"2,3-diaminopropionate ammonia-lyase activity","type":"related"},{"name":"alpha,beta-diaminopropionate ammonia-lyase activity","type":"related"},{"name":"diaminopropionatase activity","type":"related"}],"termid":"GO:0008838"}


id: PBO:0046498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERH pseudogene 1","termid":"PBO:0046498"}


id: FYPO:0003009
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere outer repeat regions of a chromosome is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"increased protein localization to chromosome during vegetative growth","termid":"FYPO:0002840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased protein localization to centromere outer repeat","synonyms":[{"name":"increased protein localisation to centromere outer repeat","type":"exact"},{"name":"increased protein localisation to centromeric outer repeat region","type":"exact"},{"name":"increased protein localization to centromere outer repeat during mitotic cell cycle","type":"related"},{"name":"increased protein localization to centromere outer repeat during vegetative growth","type":"exact"},{"name":"increased protein localization to chromosome, centric outer repeat region","type":"exact"},{"name":"increased protein localization to chromosome, centromeric outer repeat region","type":"exact"},{"name":"increased protein localization to pericentric region","type":"related"},{"name":"increased protein localization to pericentromeric region","type":"related"}],"termid":"FYPO:0003009"}


id: PBO:0083885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferrochelatase; a mitochondrial inner membrane protein, catalyzes insertion of ferrous iron into protoporphyrin IX, the eighth and final step in the heme biosynthetic pathway; human homolog FECH can complement yeast mutant and allow growth of haploid null after sporulation of a heterozygous diploid","termid":"PBO:0083885"}


id: MONDO:0007790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal dominant hereditary demyelinating motor and sensory neuropathy (obsolete MONDO:0015359)","termid":"MONDO:0015359"},{"relation_name":"excluded_subClassOf","term_name":"obsolete autosomal recessive hereditary demyelinating motor and sensory neuropathy (obsolete MONDO:0015361)","termid":"MONDO:0015361"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease","termid":"MONDO:0015626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease type 3","secondary_identifiers":["NORD:1037","MEDGEN:3710","DOID:0050540","OMIM:145900","UMLS:C0011195","NCIT:C133087","SCTID:111499002","Orphanet:64748","GARD:9204"],"synonyms":[{"name":"CMT3","type":"exact"},{"name":"Charcot-Marie-Tooth disease type 3","type":"exact"},{"name":"Charcot-Marie-Tooth disease, type 3","type":"exact"},{"name":"DSN","type":"related"},{"name":"Dejerine-Sottas Syndrome","type":"exact"},{"name":"Dejerine-Sottas neuropathy","type":"exact"},{"name":"Dejerine-Sottas syndrome","type":"exact"},{"name":"HMSN 3","type":"exact"},{"name":"HMSN III","type":"exact"},{"name":"HMSN3","type":"exact"},{"name":"dejerine-sottas disease","type":"exact"},{"name":"hereditary motor and sensory neuropathy 3","type":"related"},{"name":"hereditary motor and sensory neuropathy type 3","type":"exact"},{"name":"hereditary motor and sensory neuropathy type III","type":"exact"},{"name":"hypertrophic neuropathy of Dejerine-Sottas","type":"exact"},{"name":"hypertrophic neuropathy of infancy","type":"related"}],"termid":"MONDO:0007790","xrefs":{"Monarch":{"xref_id":"0007790"}}}


id: PBO:0064282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology domain containing M3","termid":"PBO:0064282"}


id: PBO:0026712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-loss_of_viability_in_stationary_phase_upon_glucose_starvation","termid":"PBO:0026712"}


id: PBO:0076093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stum, mechanosensory transduction mediator homolog","termid":"PBO:0076093"}


id: PBO:0055615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3054","termid":"PBO:0055615"}


id: GO:2001311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving a lysobisphosphatidic acid. A lysobisphosphatidic acid is a lysophosphatidic acid having the unusual property of a phosphodiester moiety linked to positions sn-1 and sn1' of glycerol; and two additional fatty acids esterified to the glycerol head group.","definition_xrefs":["GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"},{"relation_name":"is_a","term_name":"alditol phosphate metabolic process","termid":"GO:0052646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"lysobisphosphatidic acid metabolic process","synonyms":[{"name":"LBPA metabolic process","type":"exact"},{"name":"LBPA metabolism","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) metabolic process","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate (BMP) metabolism","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate metabolic process","type":"exact"},{"name":"bis(monoacylglycerol) hydrogen phosphate metabolism","type":"exact"},{"name":"lysobisphosphatidic acid metabolism","type":"exact"}],"termid":"GO:2001311"}


id: PBO:0069594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 869, pseudogene","termid":"PBO:0069594"}


id: PR:O74542
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C777.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.03c","synonyms":[{"name":"Spom972h-SPCC777.03c","type":"exact"}],"termid":"PR:O74542"}


id: PBO:0060916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurofibromin 1 pseudogene 3","termid":"PBO:0060916"}


id: GO:0048701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the cranial skeleton are generated and organized during the embryonic phase.","definition_xrefs":["GOC:jid","GOC:dsf","PMID:16049113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic skeletal system morphogenesis","termid":"GO:0048704"},{"relation_name":"part_of","term_name":"cranial skeletal system development","termid":"GO:1904888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic cranial skeleton morphogenesis","synonyms":[{"name":"embryonic cranium morphogenesis","type":"exact"}],"termid":"GO:0048701"}


id: MONDO:0003810
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare morphologic variant of bladder adenocarcinoma characterized by the presence of malignant glandular epithelial cells and clear cells forming a diffuse pattern.","definition_xrefs":["NCIT:C39849"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bladder clear cell adenocarcinoma","termid":"MONDO:0003386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bladder diffuse clear cell adenocarcinoma","secondary_identifiers":["UMLS:C1511187","DOID:6210","MEDGEN:267058"],"synonyms":[{"name":"bladder diffuse clear cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0003810","xrefs":{"Monarch":{"xref_id":"0003810"}}}


id: MONDO:1011940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ocular-skeletal dysplasia, non-human animal","secondary_identifiers":["OMIA:000301"],"termid":"MONDO:1011940","xrefs":{"Monarch":{"xref_id":"1011940"}}}


id: MONDO:0000533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete vaginal carcinoma (obsolete MONDO:0000533)","termid":"MONDO:0000533","xrefs":{"Monarch":{"xref_id":"0000533"}}}


id: PR:Q9URX4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URX4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized family 31 glucosidase C1039.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1039.11c","synonyms":[{"name":"Spom972h-gto1","type":"exact"}],"termid":"PR:Q9URX4"}


id: GO:0097318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The growth of colonies in filamentous chains of cells as a result of a abiotic stimulus. An example of this process is found in Candida albicans.","definition_xrefs":["GOC:di","PMID:18679170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to abiotic stimulus","termid":"GO:0009628"},{"relation_name":"is_a","term_name":"invasive filamentous growth","termid":"GO:0036267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"invasive growth in response to abiotic stimulus","termid":"GO:0097318"}


id: PR:P09627
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pma1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P09627"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ATPase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1071.10c","synonyms":[{"name":"Spom972h-pma1","type":"exact"},{"name":"proton pump 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P09627"}


id: MONDO:1011745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"comedo syndrome, non-human animal","secondary_identifiers":["OMIA:001272"],"termid":"MONDO:1011745","xrefs":{"Monarch":{"xref_id":"1011745"}}}


id: MONDO:1011640
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiovascular disorder, non-human animal","termid":"MONDO:1011306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial septal defect and atrial fibrillation, non-human animal","secondary_identifiers":["OMIA:000090"],"termid":"MONDO:1011640","xrefs":{"Monarch":{"xref_id":"1011640"}}}


id: MONDO:0015578
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare fungal infectious disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare mycosis (obsolete MONDO:0015578)","secondary_identifiers":["Orphanet:163591"],"synonyms":[{"name":"rare fungal infectious disease","type":"exact"}],"termid":"MONDO:0015578","xrefs":{"Monarch":{"xref_id":"0015578"}}}


id: PBO:0068926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 169, pseudogene","termid":"PBO:0068926"}


id: PBO:0088291
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino acid transmembrane transporter Meu22","termid":"PBO:0088291"}


id: MONDO:0030869
data:
  {"annotated_genes":["SJAG_02339"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87691],"is_not":false,"summary":null,"term":"MONDO:0030869"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 50","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0112272","OMIM:619145","MEDGEN:1747507","UMLS:C5436888"],"synonyms":[{"name":"SPGF50","type":"exact"},{"name":"spermatogenic failure","type":"broad"},{"name":"spermatogenic failures 50","type":"exact"}],"termid":"MONDO:0030869","terms_by_termid":{"MONDO:0030869":null},"xrefs":{"Monarch":{"xref_id":"0030869"}}}


id: MONDO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete central polydactyly of toes (obsolete MONDO:0017459)","secondary_identifiers":["Orphanet:295010","SCTID:253967005"],"synonyms":[{"name":"central polydactyly of foot","type":"exact"},{"name":"mesoaxial polydactyly of toes","type":"exact"},{"name":"mirror foot","type":"exact"}],"termid":"MONDO:0017459","xrefs":{"Monarch":{"xref_id":"0017459"}}}


id: MONDO:0015509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Genetic biliary tract disease.","gene_count":0,"genotype_count":0,"name":"obsolete hereditary biliary tract disease (obsolete MONDO:0015509)","secondary_identifiers":["Orphanet:156607"],"synonyms":[{"name":"genetic biliary tract disease","type":"exact"}],"termid":"MONDO:0015509","xrefs":{"Monarch":{"xref_id":"0015509"}}}


id: GO:0036419
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mycolate outer membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:md","GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of mycolate outer membrane (obsolete GO:0036419)","synonyms":[{"name":"integral to MOM","type":"exact"},{"name":"integral to mycolate outer membrane","type":"narrow"},{"name":"integral to mycomembrane","type":"exact"}],"termid":"GO:0036419"}


id: PBO:0013787
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trimeric","termid":"PBO:0013787"}


id: GO:0061913
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["PMID:19264869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0003420"},{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"positively_regulates","term_name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of growth plate cartilage chondrocyte proliferation","termid":"GO:0061913"}


id: MONDO:0000608
data:
  {"annotated_genes":["SJAG_02330","SJAG_02208"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88106,88107],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014891"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited kidney disorder","termid":"MONDO:0100191"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02208":null,"SJAG_02330":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"familial juvenile hyperuricemic nephropathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C537696","DOID:0060062","NANDO:2100014","OMIMPS:162000","SCTID:46785007","MEDGEN:75651","NANDO:2200139","UMLS:C0268113"],"synonyms":[{"name":"FJHN","type":"exact"},{"name":"familial juvenile gouty nephropathy","type":"exact"},{"name":"familial juvenile hyperuricemic nephropathy","type":"exact"},{"name":"familial nephropathy associated with hyperuricemia","type":"exact"},{"name":"familial nephropathy with gout","type":"exact"},{"name":"gouty nephropathy, familial","type":"related"},{"name":"gouty nephropathy, familial juvenile","type":"exact"},{"name":"juvenile gout","type":"exact"},{"name":"juvenile gouty nephropathy","type":"exact"},{"name":"nephropathy, familial, with gout","type":"exact"},{"name":"tubulointerstitial kidney disease","type":"exact"}],"termid":"MONDO:0000608","terms_by_termid":{"MONDO:0014891":null},"xrefs":{"Monarch":{"xref_id":"0000608"}}}


id: GO:0046302
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 2-chloro-N-isopropylacetanilide, an acylanide herbicide widely used to protect corn, onion, cabbage, rose bushes, and ornamental plants.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catabolic process","termid":"GO:0009056"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"},{"relation_name":"is_a","term_name":"amide metabolic process","termid":"GO:0043603"},{"relation_name":"is_a","term_name":"organohalogen metabolic process","termid":"GO:0090345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"2-chloro-N-isopropylacetanilide catabolic process","synonyms":[{"name":"2-chloro-N-isopropylacetanilide breakdown","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide catabolism","type":"exact"},{"name":"2-chloro-N-isopropylacetanilide degradation","type":"exact"}],"termid":"GO:0046302"}


id: PBO:0052938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 22-2","termid":"PBO:0052938"}


id: MONDO:0007733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any holoprosencephaly in which the cause of the disease is a mutation in the SHH gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly","termid":"MONDO:0016296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"holoprosencephaly 3","secondary_identifiers":["OMIM:142945","MESH:C564181","DOID:0110875","UMLS:C1840529","MEDGEN:327125"],"synonyms":[{"name":"HLP3","type":"exact"},{"name":"HPE3","type":"exact"},{"name":"Hlp3","type":"related"},{"name":"SHH holoprosencephaly","type":"exact"},{"name":"Shh holoprosencephaly","type":"exact"},{"name":"holoprosencephaly 3","type":"exact"},{"name":"holoprosencephaly caused by mutation in SHH","type":"exact"},{"name":"holoprosencephaly caused by mutation in Shh","type":"exact"},{"name":"holoprosencephaly type 3","type":"exact"}],"termid":"MONDO:0007733","xrefs":{"Monarch":{"xref_id":"0007733"}}}


id: GO:0075225
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sporangium germination.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sporangium germination","termid":"GO:0075223"},{"relation_name":"is_a","term_name":"negative regulation of sporangium development","termid":"GO:0075312"},{"relation_name":"negatively_regulates","term_name":"sporangium germination","termid":"GO:0075222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of sporangium germination","synonyms":[{"name":"negative regulation of sporangium germination on or near host","type":"narrow"}],"termid":"GO:0075225"}


id: GO:0006183
data:
  {"annotated_genes":["SJAG_04849","SJAG_01298","SJAG_02887"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65870,76859,104251],"is_not":false,"summary":null,"term":"GO:0006183"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GTP, guanosine triphosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide biosynthetic process","termid":"GO:0009152"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate biosynthetic process","termid":"GO:0009206"},{"relation_name":"is_a","term_name":"GTP metabolic process","termid":"GO:0046039"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01298":null,"SJAG_02887":null,"SJAG_04849":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"GTP biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GTP anabolism","type":"exact"},{"name":"GTP biosynthesis","type":"exact"},{"name":"GTP formation","type":"exact"},{"name":"GTP synthesis","type":"exact"}],"termid":"GO:0006183","terms_by_termid":{"GO:0006183":null}}


id: PBO:0083275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; not conserved in closely related Saccharomyces species; deletion mutation blocks replication of Brome mosaic virus in S. cerevisiae, but this is likely due to effects on the overlapping gene DST1","termid":"PBO:0083275"}


id: PATO:0002288
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An elasticity which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"elastic","termid":"PATO:0001171"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased elasticity","termid":"PATO:0002288"}


id: PBO:0073379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sestrin 3","termid":"PBO:0073379"}


id: MONDO:0001000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumoconiosis caused by the inhalation of mixed mineral dust particles.","definition_xrefs":["NCIT:C27559"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumoconiosis","termid":"MONDO:0015926"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mixed mineral dust pneumoconiosis","secondary_identifiers":["MEDGEN:137937","DOID:10319","SCTID:233759002","ICD9:503","UMLS:C0340184"],"synonyms":[{"name":"mineral duct pneumoconiosis","type":"broad"},{"name":"mineral dust pneumoconiosis","type":"exact"},{"name":"mixed mineral dust pneumoconiosis","type":"exact"},{"name":"pneumoconiosis from mineral dust","type":"exact"}],"termid":"MONDO:0001000","xrefs":{"Monarch":{"xref_id":"0001000"}}}


id: MONDO:0016003
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An disease or disorder caused by infection with Ehrlichia.","definition_xrefs":["MONDO:patterns/specific_infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"Anaplasmataceae infectious disease","termid":"MONDO:0006922"},{"relation_name":"is_a","term_name":"tick-borne infectious disease","termid":"MONDO:0025294"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ehrlichiosis","secondary_identifiers":["GARD:2092","DOID:10242","MEDGEN:39039","MESH:D016873","ICD9:082.4","UMLS:C0085399","Orphanet:1902","SCTID:240626005","ICD9:082.40","ICD10CM:A77.4","icd11.foundation:1116297863"],"synonyms":[{"name":"human ehrlichiosis","type":"exact"}],"termid":"MONDO:0016003","xrefs":{"Monarch":{"xref_id":"0016003"}}}


id: GO:1901284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of 5,6,7,8-tetrahydromethanopterin.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pteridine-containing compound catabolic process","termid":"GO:0042560"},{"relation_name":"is_a","term_name":"dicarboxylic acid catabolic process","termid":"GO:0043649"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"},{"relation_name":"is_a","term_name":"5,6,7,8-tetrahydromethanopterin metabolic process","termid":"GO:1901283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"5,6,7,8-tetrahydromethanopterin catabolic process","synonyms":[{"name":"5,6,7,8-tetrahydromethanopterin breakdown","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin catabolism","type":"exact"},{"name":"5,6,7,8-tetrahydromethanopterin degradation","type":"exact"}],"termid":"GO:1901284"}


id: PBO:0030040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_iron","termid":"PBO:0030040"}


id: PBO:0029167
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dTTP_absent_from_cell","termid":"PBO:0029167"}


id: PBO:0075436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPANX family member N1","termid":"PBO:0075436"}


id: SO:0001330
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N2_N2_2prime_O_trimethylguanosine is a modified guanosine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_guanosine","termid":"SO:0001276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2_N2_2_prime_O_trimethylguanosine","secondary_identifiers":["RNAMOD:035"],"synonyms":[{"name":"N2,N2,2'-O-trimethylguanosine","type":"exact"},{"name":"m22Gmv","type":"exact"}],"termid":"SO:0001330"}


id: PBO:0050195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 12","termid":"PBO:0050195"}


id: PBO:0076645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-box transcription factor 2","termid":"PBO:0076645"}


id: GO:0097333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an olanzapine stimulus.","definition_xrefs":["GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to olanzapine","termid":"GO:0097333"}


id: MOD:00887
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to a methylated aspartic acid, such as aspartic acid 4-methyl ester.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"},{"relation_name":"is_a","term_name":"modified L-aspartic acid residue","termid":"MOD:00904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"methylated aspartic acid","termid":"MOD:00887"}


id: PBO:0092024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Glutamine (uug), mitochondrial","termid":"PBO:0092024"}


id: PBO:0076990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 6","termid":"PBO:0076990"}


id: PBO:0087054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L26A; binds to 5.8S rRNA; non-essential even when paralog is also deleted; deletion has minimal affections on ribosome biosynthesis; homologous to mammalian ribosomal protein L26 and bacterial L24; RPL26A has a paralog, RPL26B, that arose from the whole genome duplication","termid":"PBO:0087054"}


id: GO:0043607
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formamide, the simplest amide, HCONH2, derived from formic acid.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"formamide metabolic process","termid":"GO:0043606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formamide biosynthetic process","termid":"GO:0043607"}


id: MONDO:0014558
data:
  {"annotated_genes":["SJAG_02165"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87411],"is_not":false,"summary":null,"term":"MONDO:0014558"}]},"cv_name":"mondo","definition":"A rare genetic neurodevelopmental disorder characterized by global developmental delay (DD) and variable degrees of intellectual disability (ID) with delayed or limited/absent speech development associated with neonatal hypotonia, feeding difficulties, cardiac anomalies and dysmorphic facial features, predominantly broad nasal tip and thin, tented upper lip. Microcephaly, frequent infections, gastrointestinal and/or ocular anomalies have also been described.","definition_xrefs":["Orphanet:457193"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"syndromic craniosynostosis","termid":"MONDO:0015338"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02165":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005267","MONDO:0002320","MONDO:0005497"],"is_obsolete":false,"name":"autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616268","UMLS:C4225396","GARD:17797","NORD:1954","DOID:0070062","MEDGEN:903767"],"synonyms":[{"name":"Arboleda-Tham syndrome","type":"exact"},{"name":"KAT6A Syndrome","type":"exact"},{"name":"MRD32","type":"exact"},{"name":"autosomal dominant intellectual disability 32","type":"exact"},{"name":"autosomal dominant intellectual disability-craniofacial anomalies-cardiac defects syndrome","type":"exact"},{"name":"autosomal dominant mental retardation 32","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 32","type":"related"},{"name":"intellectual disability, autosomal dominant 32","type":"related"},{"name":"intellectual disability, autosomal dominant type 32","type":"exact"},{"name":"mental retardation, autosomal dominant 32","type":"related"},{"name":"mental retardation, autosomal dominant type 32","type":"exact"}],"termid":"MONDO:0014558","terms_by_termid":{"MONDO:0014558":null},"xrefs":{"Monarch":{"xref_id":"0014558"}}}


id: PBO:0044819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109B","termid":"PBO:0044819"}


id: PBO:0027850
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nuclease_activity","termid":"PBO:0027850"}


id: MONDO:0958325
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombocytopenia","termid":"MONDO:0100241"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombocytopenia 12 with or without myopathy","secondary_identifiers":["OMIM:620757","UMLS:C5935593","MEDGEN:1861803"],"termid":"MONDO:0958325","xrefs":{"Monarch":{"xref_id":"0958325"}}}


id: GO:0045768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of anti-apoptosis.","definition_xrefs":["GOC:go_curators","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of anti-apoptosis (obsolete GO:0045768)","synonyms":[{"name":"activation of anti-apoptosis","type":"narrow"},{"name":"positive regulation of anti-apoptosis","type":"exact"},{"name":"stimulation of anti-apoptosis","type":"narrow"},{"name":"up regulation of anti-apoptosis","type":"exact"},{"name":"up-regulation of anti-apoptosis","type":"exact"},{"name":"upregulation of anti-apoptosis","type":"exact"}],"termid":"GO:0045768"}


id: GO:0018519
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cis-1,2-dihydro-3-ethylcatechol + NAD+ = 3-ethylcatechol + H+ + NADH.","definition_xrefs":["EC:1.3.1.66","RHEA:18101"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cis-dihydroethylcatechol dehydrogenase activity","secondary_identifiers":["UM-BBD_reactionID:r0309","KEGG_REACTION:R05313","MetaCyc:1.3.1.66-RXN"],"synonyms":[{"name":"cis-1,2-dihydro-3-ethylcatechol:NAD+ oxidoreductase activity","type":"related"},{"name":"cis-ethylbenzene glycol dehydrogenase activity","type":"exact"}],"termid":"GO:0018519"}


id: PBO:0056531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCC regulator of WNT signaling pathway","termid":"PBO:0056531"}


id: FYPO:0003707
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing valinomycin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000257","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on valinomycin","synonyms":[{"name":"normal cell population growth in presence of valinomycin","type":"exact"},{"name":"normal cell population growth on valinomycin","type":"exact"},{"name":"normal cellular response to valinomycin","type":"related"},{"name":"normal vegetative cell population growth on valinomycin","type":"exact"}],"termid":"FYPO:0003707"}


id: PBO:0072708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 2B","termid":"PBO:0072708"}


id: MONDO:0004918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal ulcer","termid":"MONDO:0004577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"central corneal ulcer","secondary_identifiers":["DOID:9910","ICD9:370.03","ICD10CM:H16.01","icd11.foundation:457542318","SCTID:7426009","UMLS:C0155069","MEDGEN:509767"],"termid":"MONDO:0004918","xrefs":{"Monarch":{"xref_id":"0004918"}}}


id: PBO:0053332
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 165","termid":"PBO:0053332"}


id: MONDO:0019240
data:
  {"annotated_genes":["SJAG_02855","SJAG_03018","SJAG_03509","SJAG_00717","SJAG_01474","SJAG_03024","SJAG_04865","SJAG_04810"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008974"},{"annotations":[88736,88737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009849"},{"annotations":[88602,88601],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011816"},{"annotations":[87037,87036],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012481"},{"annotations":[87763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014793"},{"annotations":[89227],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010035"}]},"cv_name":"mondo","definition":"An inherited metabolic disease that is has its basis in the disruption of sterol biosynthetic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"sterol metabolism disorder","termid":"MONDO:0019256"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00717":null,"SJAG_01474":null,"SJAG_02855":null,"SJAG_03018":null,"SJAG_03024":null,"SJAG_03509":null,"SJAG_04810":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"sterol biosynthesis disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1843040","UMLS:C5681287","GARD:18969","Orphanet:79195"],"synonyms":[{"name":"inborn error of sterol biosynthetic process","type":"exact"},{"name":"inborn sterol biosynthetic process disorder","type":"exact"},{"name":"rare inborn error of sterol biosynthetic process","type":"exact"}],"termid":"MONDO:0019240","terms_by_termid":{"MONDO:0008974":null,"MONDO:0009849":null,"MONDO:0010035":null,"MONDO:0010621":null,"MONDO:0011816":null,"MONDO:0012481":null,"MONDO:0014793":null},"xrefs":{"Monarch":{"xref_id":"0019240"}}}


id: GO:0097090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process which results in the assembly, arrangement of constituent parts, or disassembly of a presynaptic membrane, including any proteins associated with the membrane, but excluding other cellular components. A presynaptic membrane is a specialized area of membrane of the axon terminal that faces the plasma membrane of the neuron or muscle fiber with which the axon terminal establishes a synaptic junction.","definition_xrefs":["GOC:BHF","PMID:19730411","GOC:sjp","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0061024","GO:0008150"],"is_obsolete":false,"name":"presynaptic membrane organization","synonyms":[{"name":"pre-synaptic membrane organization","type":"exact"},{"name":"presynaptic membrane organisation","type":"exact"}],"termid":"GO:0097090"}


id: PR:O94269
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ubp3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94269"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin carboxyl-terminal hydrolase 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.21","synonyms":[{"name":"Spom972h-ubp3","type":"exact"},{"name":"deubiquitinating enzyme 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin thioesterase 3 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ubiquitin-specific-processing protease 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94269"}


id: PBO:0069870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1157, pseudogene","termid":"PBO:0069870"}


id: PBO:0088201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains","termid":"PBO:0088201"}


id: PR:Q9UTR6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- och1 gene.","definition_xrefs":["UniProtKB:Q9UTR6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"initiation-specific alpha-1,6-mannosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.05c","synonyms":[{"name":"Spom972h-och1","type":"exact"}],"termid":"PR:Q9UTR6"}


id: PBO:0047804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box K1","termid":"PBO:0047804"}


id: GO:1902868
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of retina development in camera-type eye.","definition_xrefs":["GOC:TermGenie","PMID:16872597","GOC:mr","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of retina development in camera-type eye","termid":"GO:1902866"},{"relation_name":"positively_regulates","term_name":"retina development in camera-type eye","termid":"GO:0060041"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of retina development in camera-type eye","synonyms":[{"name":"activation of retina development in camera-style eye","type":"narrow"},{"name":"activation of retina development in camera-type eye","type":"narrow"},{"name":"activation of retinal development","type":"related"},{"name":"positive regulation of retina development in camera-style eye","type":"exact"},{"name":"positive regulation of retinal development","type":"related"},{"name":"up regulation of retina development in camera-style eye","type":"exact"},{"name":"up regulation of retina development in camera-type eye","type":"exact"},{"name":"up regulation of retinal development","type":"related"},{"name":"up-regulation of retina development in camera-style eye","type":"exact"},{"name":"up-regulation of retina development in camera-type eye","type":"exact"},{"name":"up-regulation of retinal development","type":"related"},{"name":"upregulation of retina development in camera-style eye","type":"exact"},{"name":"upregulation of retina development in camera-type eye","type":"exact"},{"name":"upregulation of retinal development","type":"related"}],"termid":"GO:1902868"}


id: MONDO:0030453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy 97","secondary_identifiers":["UMLS:C5561999","OMIM:619561","DOID:0070383","MEDGEN:1794209"],"synonyms":[{"name":"DEE97","type":"exact"}],"termid":"MONDO:0030453","xrefs":{"Monarch":{"xref_id":"0030453"}}}


id: GO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The morphogenetic process in which the myocardium bends along a linear axis and contributes to the process of heart jogging.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelial fold","termid":"GO:0060571"},{"relation_name":"part_of","term_name":"heart jogging","termid":"GO:0003146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myocardial epithelial involution involved in heart jogging","termid":"GO:0003304"}


id: GO:0016075
data:
  {"annotated_genes":["SJAG_04153","SJAG_03276","SJAG_04084","SJAG_04824","SJAG_04818","SJAG_03728","SJAG_04321","SJAG_03507","SJAG_05029","SJAG_03179","SJAG_04283","SJAG_01521","SJAG_04006","SJAG_01818","SJAG_03745","SJAG_00854","SJAG_03984","SJAG_04264","SJAG_01191"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[79850,99749,115324,115876],"is_not":false,"summary":null,"term":"GO:0016075"},{"annotations":[95084,117505,94252,117944,97926,99505,104098,108496,76498,109579,99250,107287,106417,109491,120382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070651"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of rRNA, ribosomal RNA, a structural constituent of ribosomes.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA catabolic process","termid":"GO:0006401"},{"relation_name":"is_a","term_name":"rRNA metabolic process","termid":"GO:0016072"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00854":null,"SJAG_01191":null,"SJAG_01521":null,"SJAG_01818":null,"SJAG_03179":null,"SJAG_03276":null,"SJAG_03507":null,"SJAG_03728":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04006":null,"SJAG_04084":null,"SJAG_04153":null,"SJAG_04264":null,"SJAG_04283":null,"SJAG_04321":null,"SJAG_04818":null,"SJAG_04824":null,"SJAG_05029":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"rRNA breakdown","type":"exact"},{"name":"rRNA catabolism","type":"exact"},{"name":"rRNA degradation","type":"exact"}],"termid":"GO:0016075","terms_by_termid":{"GO:0016075":null,"GO:0070651":null}}


id: PBO:0083479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified genes YJL085W/EXO70 and YJL087C/TRL1","termid":"PBO:0083479"}


id: GO:2000724
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cardiac vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905065"},{"relation_name":"is_a","term_name":"positive regulation of cardiocyte differentiation","termid":"GO:1905209"},{"relation_name":"is_a","term_name":"regulation of cardiac vascular smooth muscle cell differentiation","termid":"GO:2000722"},{"relation_name":"positively_regulates","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"positive regulation of heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000724"}


id: MONDO:0001008
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The abnormal narrowness of the palpebral fissure in the horizontal direction caused by the lateral displacement of the medial canthi of the eyelids. (Dorland, 27th ed)","definition_xrefs":["MESH:D016569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"blepharophimosis","secondary_identifiers":["MEDGEN:2670","DOID:10348","UMLS:C0005744","HP:0000581","ICD9:374.46","ICD10CM:H02.52"],"synonyms":[{"name":"blepharophimosis","type":"exact"},{"name":"blepharophimosis (disease)","type":"exact"}],"termid":"MONDO:0001008","xrefs":{"Monarch":{"xref_id":"0001008"}}}


id: PBO:0049195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRID1 antisense RNA 1","termid":"PBO:0049195"}


id: MONDO:0010200
data:
  {"annotated_genes":["SJAG_02399"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89140],"is_not":false,"summary":null,"term":"MONDO:0010200"}]},"cv_name":"mondo","definition":"A very rare inherited multisystemic disease presenting non-specific neurological, hepatic, psychiatric or osseo-muscular manifestations due to excessive copper deposition in the body.","definition_xrefs":["Orphanet:905"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"excluded_subClassOf","term_name":"eye disorder","termid":"MONDO:0005328"},{"relation_name":"excluded_subClassOf","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"excluded_subClassOf","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"},{"relation_name":"excluded_subClassOf","term_name":"supranuclear oculomotor palsy","termid":"MONDO:0020257"},{"relation_name":"excluded_subClassOf","term_name":"inherited dystonia","termid":"MONDO:0044807"},{"relation_name":"is_a","term_name":"inborn metal metabolism disorder","termid":"MONDO:0004689"},{"relation_name":"is_a","term_name":"disorder of copper metabolism","termid":"MONDO:0017762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02399":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"Wilson disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:E83.01","NCIT:C84756","NORD:1856","MedDRA:10019819","OMIM:277900","SCTID:88518009","UMLS:C0019202","icd11.foundation:468161208","DOID:893","GARD:7893","MESH:D006527","MEDGEN:42426","NANDO:1200655","NANDO:2200579"],"synonyms":[{"name":"WD","type":"related"},{"name":"Westphal pseudosclerosis","type":"exact"},{"name":"Westphal-Strumpell syndrome","type":"exact"},{"name":"Wilson disease","type":"exact"},{"name":"Wilson's disease","type":"exact"},{"name":"Wnd","type":"related"},{"name":"cerebral pseudosclerosis","type":"exact"},{"name":"hepatolenticular Degeneration","type":"related"},{"name":"hepatolenticular degeneration","type":"exact"}],"termid":"MONDO:0010200","terms_by_termid":{"MONDO:0010200":null},"xrefs":{"Monarch":{"xref_id":"0010200"}}}


id: MONDO:0044870
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of torsion dystonia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"torsion dystonia","termid":"MONDO:0044843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"acquired torsion dystonia","secondary_identifiers":["UMLS:C1719382","SCTID:433493000","MEDGEN:739598"],"synonyms":[{"name":"acquired torsion dystonia","type":"exact"}],"termid":"MONDO:0044870","xrefs":{"Monarch":{"xref_id":"0044870"}}}


id: PBO:0079295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 12","termid":"PBO:0079295"}


id: PBO:0074311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 3","termid":"PBO:0074311"}


id: PBO:0038708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin gamma 1 pseudogene 2","termid":"PBO:0038708"}


id: MONDO:0003054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A grade I, slowly growing meningioma. Only a minority of tumors recur following complete resection.","definition_xrefs":["NCIT:C4055"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"},{"relation_name":"is_a","term_name":"benign neoplasm of meninges","termid":"MONDO:0021527"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign meningioma","secondary_identifiers":["UMLS:C0281784","SCTID:724171006","DOID:4587","MEDGEN:129095"],"synonyms":[{"name":"benign meningioma (WHO grade I)","type":"exact"},{"name":"meningioma (disease), benign","type":"exact"},{"name":"meningioma, benign","type":"exact"}],"termid":"MONDO:0003054","xrefs":{"Monarch":{"xref_id":"0003054"}}}


id: MONDO:0011905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial hypercholanemia (obsolete MONDO:0011905)","termid":"MONDO:0011905","xrefs":{"Monarch":{"xref_id":"0011905"}}}


id: PBO:0091972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf antidote-like meiotic drive suppressor Wtf18","termid":"PBO:0091972"}


id: GO:0032644
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of fractalkine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chemokine production","termid":"GO:0032642"},{"relation_name":"regulates","term_name":"fractalkine production","termid":"GO:0032603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of fractalkine production","secondary_identifiers":["GO:0050752"],"synonyms":[{"name":"regulation of CX3CL1 biosynthesis","type":"narrow"},{"name":"regulation of CX3CL1 production","type":"narrow"},{"name":"regulation of fractalkine biosynthetic process","type":"narrow"}],"termid":"GO:0032644"}


id: PBO:0003080
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"promoter contains HSE element","termid":"PBO:0003080"}


id: PBO:0108543
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExRNA","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alternative transcripts, alternative mRNA processing","termid":"PBO:0108543"}


id: PBO:0109001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 96","termid":"PBO:0109001"}


id: GO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a trachea over time, from its formation to the mature structure. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"respiratory system development","termid":"GO:0060541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea development","termid":"GO:0060438"}


id: PBO:0074469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermine synthase","termid":"PBO:0074469"}


id: GO:0033000
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex composed of an Fc-gamma RI alpha chain and an Fc-epsilon RI gamma chain dimer with or without additional signaling components. The complex functions primarily as an activating receptor for IgG.","definition_xrefs":["ISBN:0781735149","PMID:12413532","PMID:11244038","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fc receptor complex","termid":"GO:0032997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"Fc-gamma receptor I complex","synonyms":[{"name":"FcgRI complex","type":"exact"},{"name":"IgG receptor complex","type":"broad"},{"name":"immunoglobulin G receptor complex","type":"broad"}],"termid":"GO:0033000"}


id: GO:0002202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The somatic process that results in the generation of sequence diversity of the variable lymphocyte receptors (VLR) of jawless fish.","definition_xrefs":["PMID:16373579","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic diversification of immune receptors","termid":"GO:0002200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"somatic diversification of variable lymphocyte receptors of jawless fish","termid":"GO:0002202"}


id: PR:Q9HDU6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pan5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HDU6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-dehydropantoate 2-reductase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB2B2.09c","synonyms":[{"name":"KPA reductase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"KPR (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-pan5","type":"exact"},{"name":"ketopantoate reductase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HDU6"}


id: PATO:0001317
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A temperature which is increased by a high degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased temperature","termid":"PATO:0001305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe increased temperature","termid":"PATO:0001317"}


id: GO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Chemical reaction, between proteins and reactive oxygen species, that occurs in dividing cells as they age and leads to a variety of changes in the affected proteins, including increases in protein carbonyl content, oxidized methionine, protein hydrophobicity, and cross-linking.","definition_xrefs":["GOC:jh"],"gene_count":0,"genotype_count":0,"name":"obsolete formation of oxidatively modified proteins involved in replicative cell aging (obsolete GO:0001318)","synonyms":[{"name":"formation of oxidatively modified proteins during replicative cell ageing","type":"related"},{"name":"formation of oxidatively modified proteins during replicative cell aging","type":"related"}],"termid":"GO:0001318"}


id: GO:0052129
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a motile cell or organism towards a lower level of a physical stimulus involved in energy generation, such as light, oxygen, and oxidizable substrates.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy taxis","termid":"GO:0009453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative energy taxis","termid":"GO:0052129"}


id: PBO:0029089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_spheroid_cell","termid":"PBO:0029089"}


id: MONDO:0017370
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autoinflammatory syndrome with skin involvement (obsolete MONDO:0017370)","secondary_identifiers":["Orphanet:290842"],"termid":"MONDO:0017370","xrefs":{"Monarch":{"xref_id":"0017370"}}}


id: GO:0035870
data:
  {"annotated_genes":["SJAG_04487","SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101005,120686],"is_not":false,"summary":null,"term":"GO:0035870"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: dITP + H2O = dIMP + H+ + diphosphate.","definition_xrefs":["PMID:21548881","RHEA:28342","GOC:dgf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03797":null,"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0047429"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0047429","GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"dITP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R03531","MetaCyc:RXN0-1602","Reactome:R-HSA-2509838"],"synonyms":[{"name":"2'-deoxyinosine-5'-triphosphate pyrophosphohydrolase activity","type":"exact"},{"name":"dITP pyrophosphatase activity","type":"exact"},{"name":"deoxyinosine triphosphate pyrophosphatase activity","type":"exact"}],"termid":"GO:0035870","terms_by_termid":{"GO:0035870":null}}


id: PBO:0039368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute myeloid leukemia chromosome region 2","termid":"PBO:0039368"}


id: GO:0090697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Morphogenesis, during the post-embryonic phase, of a plant tissue or tissues that work together to perform a specific function or functions. Morphogenesis pertains to process in which anatomical structures are generated and organized. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic plant morphogenesis","termid":"GO:0090698"},{"relation_name":"is_a","term_name":"plant organ morphogenesis","termid":"GO:1905392"},{"relation_name":"part_of","term_name":"post-embryonic plant organ development","termid":"GO:0090696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic plant organ morphogenesis","termid":"GO:0090697"}


id: PBO:0060902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal differentiation 1","termid":"PBO:0060902"}


id: GO:0098919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a postsynaptic density.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural constituent of postsynaptic specialization","termid":"GO:0098879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of postsynaptic density","termid":"GO:0098919"}


id: PR:Q9C0Z1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- toe3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9C0Z1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein PB24D3.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAPB24D3.01","synonyms":[{"name":"Spom972h-toe3","type":"exact"}],"termid":"PR:Q9C0Z1"}


id: GO:1901330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of odontoblast differentiation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inhibition of neuroepithelial cell differentiation","termid":"GO:0002085"},{"relation_name":"is_a","term_name":"regulation of odontoblast differentiation","termid":"GO:1901329"},{"relation_name":"negatively_regulates","term_name":"odontoblast differentiation","termid":"GO:0071895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of odontoblast differentiation","synonyms":[{"name":"down regulation of odontoblast differentiation","type":"exact"},{"name":"down-regulation of odontoblast differentiation","type":"exact"},{"name":"downregulation of odontoblast differentiation","type":"exact"},{"name":"inhibition of odontoblast differentiation","type":"narrow"}],"termid":"GO:1901330"}


id: PBO:0078892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 4-1","termid":"PBO:0078892"}


id: GO:1905183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of protein serine/threonine phosphatase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:16950131"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of protein serine/threonine phosphatase activity (obsolete GO:1905183)","synonyms":[{"name":"down regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"down regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"down-regulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"down-regulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"downregulation of protein serine/threonine phosphatase activity","type":"exact"},{"name":"downregulation of serine/threonine specific protein phosphatase activity","type":"exact"},{"name":"inhibition of protein serine/threonine phosphatase activity","type":"narrow"},{"name":"inhibition of serine/threonine specific protein phosphatase activity","type":"narrow"},{"name":"negative regulation of serine/threonine specific protein phosphatase activity","type":"exact"}],"termid":"GO:1905183"}


id: PBO:0070774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 4","termid":"PBO:0070774"}


id: GO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Tolerance induction dependent upon an immune response, typically a response by a mature T or B cell in the periphery resulting tolerance towards an antigen via induction of anergy, cellular deletion, or regulatory T cell activation.","definition_xrefs":["GO_REF:0000022","GOC:jal","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"tolerance induction","termid":"GO:0002507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction dependent upon immune response","synonyms":[{"name":"immune response-dependent tolerance induction","type":"exact"}],"termid":"GO:0002461"}


id: GO:2000451
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of CD8-positive, alpha-beta T cell extravasation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of T cell extravasation","termid":"GO:2000409"},{"relation_name":"is_a","term_name":"regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000449"},{"relation_name":"positively_regulates","term_name":"CD8-positive, alpha-beta T cell extravasation","termid":"GO:0035697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of CD8-positive, alpha-beta T cell extravasation","termid":"GO:2000451"}


id: MONDO:0016881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"},{"relation_name":"is_a","term_name":"chromosome 19 disorder","termid":"MONDO:0700024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of chromosome 19","secondary_identifiers":["GARD:20804","Orphanet:261841","UMLS:C5679663","MEDGEN:1825965"],"synonyms":[{"name":"partial deletion of chromosome type 19","type":"exact"},{"name":"partial monosomy of chromosome 19","type":"exact"}],"termid":"MONDO:0016881","xrefs":{"Monarch":{"xref_id":"0016881"}}}


id: PBO:0063259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 5","termid":"PBO:0063259"}


id: PBO:0030188
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-cut_during_cellular_response_to_hydroxyurea","termid":"PBO:0030188"}


id: PBO:0028109
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_bis(5'-adenosyl)-hexaphosphatase_activity","termid":"PBO:0028109"}


id: MONDO:0012114
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, Beasley-Cohen type","secondary_identifiers":["GARD:10102","MEDGEN:332459","UMLS:C1837462","OMIM:608763","MESH:C536199"],"synonyms":[{"name":"Ehlers-Danlos syndrome with intellectual disability, deafness, and cataract","type":"related"},{"name":"Ehlers-Danlos syndrome with mental retardation, deafness, and cataract","type":"related"},{"name":"Ehlers-Danlos syndrome, Beasley-Cohen type","type":"exact"}],"termid":"MONDO:0012114","xrefs":{"Monarch":{"xref_id":"0012114"}}}


id: GO:0031515
data:
  {"annotated_genes":["SJAG_02386","SJAG_02637"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76101,76891],"is_not":false,"summary":null,"term":"GO:0031515"}]},"cv_name":"cellular_component","definition":"A protein complex involved in the catalysis of the formation of the modified nucleotide 1-methyladenosine (m1A) in tRNA. In yeast, it is a heterotetramer of two subunits, Gcd10p and Gcd14p, while in bacteria and archaea it is a homotetramer.","definition_xrefs":["PMID:10779558","PMID:14739239"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02386":null,"SJAG_02637":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA (m1A) methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0031515","terms_by_termid":{"GO:0031515":null}}


id: GO:0034627
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide (NAD), beginning with the synthesis of tryptophan or aspartate from simpler precursors; biosynthesis may be of either the oxidized form, NAD+, or the reduced form, NADH.","definition_xrefs":["GOC:imk","PMID:17161604"],"gene_count":0,"genotype_count":0,"name":"obsolete 'de novo' NAD biosynthetic process (obsolete GO:0034627)","synonyms":[{"name":"de novo NAD biosynthetic process","type":"related"}],"termid":"GO:0034627"}


id: PBO:0109639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1F (pseudogene)","termid":"PBO:0109639"}


id: MONDO:0032747
data:
  {"annotated_genes":["SJAG_01156"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89130],"is_not":false,"summary":null,"term":"MONDO:0032747"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hydatidiform mole","termid":"MONDO:0006248"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01156":null},"genotype_count":0,"is_obsolete":false,"name":"hydatidiform mole, recurrent, 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1677210","GARD:18368","OMIM:618432","UMLS:C5193094"],"synonyms":[{"name":"HYDATIDIFORM MOLE, RECURRENT, 4","type":"related"},{"name":"HYDM4","type":"related"}],"termid":"MONDO:0032747","terms_by_termid":{"MONDO:0032747":null},"xrefs":{"Monarch":{"xref_id":"0032747"}}}


id: PATO:0000560
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000560 height value (obsolete PATO:0000560)","termid":"PATO:0000560"}


id: PBO:0036159
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_oxidation_during_vegetative_growth","termid":"PBO:0036159"}


id: MONDO:0024609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive squamous cell carcinoma arising from the vulva. Risk factors include the human papilloma virus and cigarette smoking. Precursor lesions include the vulvar intraepithelial neoplasia, lichen sclerosus with associated squamous cell hyperplasia, and chronic granulomatous vulvar disease such as granuloma inguinale. Symptoms include vulvar pruritus or irritation, discharge, bleeding, and pain. The following morphologic variants have been identified: keratinizing, non-keratinizing, basaloid, warty, verrucous, keratoacanthoma-like, and squamous cell carcinoma with tumor giant cells. Risk factors for recurrence include advanced stage, tumor diameter greater than 2.5 cm, multifocality, capillary-like space involvement, associated vulvar intraepithelial neoplasia grades 2 or 3, and margins of resection involved by tumor. (WHO, 2003)","definition_xrefs":["NCIT:C4052"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar squamous neoplasm","termid":"MONDO:0002195"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"vulvar carcinoma","termid":"MONDO:0005215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulvar squamous cell carcinoma","secondary_identifiers":["MEDGEN:79201","icd11.foundation:146824338","SCTID:254895003","UMLS:C0280856","Orphanet:494448","DOID:2101","EFO:1000624","GARD:22005"],"synonyms":[{"name":"epidermoid carcinoma of the vulva","type":"exact"},{"name":"epidermoid carcinoma of vulva","type":"exact"},{"name":"epidermoid cell carcinoma of the vulva","type":"exact"},{"name":"epidermoid cell carcinoma of vulva","type":"exact"},{"name":"mammalian vulva squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the vulva","type":"exact"},{"name":"squamous cell carcinoma of vulva","type":"exact"},{"name":"vulva epidermoid carcinoma","type":"exact"},{"name":"vulva epidermoid cell carcinoma","type":"exact"},{"name":"vulva squamous cell carcinoma","type":"exact"},{"name":"vulvar epidermoid carcinoma","type":"exact"},{"name":"vulvar epidermoid cell carcinoma","type":"exact"},{"name":"vulvar squamous cell cancer","type":"exact"},{"name":"vulvar squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0024609","xrefs":{"Monarch":{"xref_id":"0024609"}}}


id: GO:0045830
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of isotype switching.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin production","termid":"GO:0002639"},{"relation_name":"is_a","term_name":"positive regulation of immunoglobulin mediated immune response","termid":"GO:0002891"},{"relation_name":"is_a","term_name":"regulation of isotype switching","termid":"GO:0045191"},{"relation_name":"is_a","term_name":"positive regulation of DNA recombination","termid":"GO:0045911"},{"relation_name":"is_a","term_name":"positive regulation of B cell activation","termid":"GO:0050871"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"positively_regulates","term_name":"isotype switching","termid":"GO:0045190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0006310"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"positively_regulates","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006310","GO:0010467"],"is_obsolete":false,"name":"positive regulation of isotype switching","synonyms":[{"name":"activation of isotype switching","type":"narrow"},{"name":"positive regulation of class switch recombination","type":"exact"},{"name":"positive regulation of class switching","type":"exact"},{"name":"positive regulation of isotype switch recombination","type":"exact"},{"name":"stimulation of isotype switching","type":"narrow"},{"name":"up regulation of isotype switching","type":"exact"},{"name":"up-regulation of isotype switching","type":"exact"},{"name":"upregulation of isotype switching","type":"exact"}],"termid":"GO:0045830"}


id: PBO:0075465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 17","termid":"PBO:0075465"}


id: PBO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transmembrane transporter Ght2","termid":"PBO:0018037"}


id: GO:0009008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to a DNA molecule.","definition_xrefs":["PMID:7862522","ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016741","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"DNA-methyltransferase activity","secondary_identifiers":["Reactome:R-HSA-5227490"],"synonyms":[{"name":"DNA methylase","type":"broad"},{"name":"DNA methyltransferase activity","type":"exact"},{"name":"DNA transmethylase activity","type":"exact"},{"name":"Type II DNA methylase","type":"related"},{"name":"deoxyribonucleate methylase activity","type":"exact"},{"name":"deoxyribonucleate methyltransferase activity","type":"exact"},{"name":"deoxyribonucleic acid methylase activity","type":"exact"},{"name":"deoxyribonucleic acid methyltransferase activity","type":"exact"},{"name":"deoxyribonucleic acid modification methylase activity","type":"related"}],"termid":"GO:0009008"}


id: PBO:0081115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger AN1-type containing 4","termid":"PBO:0081115"}


id: PBO:0087645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the GPI:protein transamidase complex; removes the GPI-anchoring signal and attaches GPI (glycosylphosphatidylinositol) to proteins in the ER; human homolog GPAA1 can complement growth defects of yeast thermosensitive mutant at restrictive temperature","termid":"PBO:0087645"}


id: MONDO:0007902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of lichen planus that is caused by an inherited modification of the individual's genome.","definition_xrefs":["MONDO:patterns/hereditary"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lichen planus, familial","secondary_identifiers":["UMLS:C1835402","MEDGEN:372036","OMIM:151620","MESH:C563624"],"synonyms":[{"name":"hereditary lichen planus","type":"exact"},{"name":"lichen planus, familial","type":"exact"}],"termid":"MONDO:0007902","xrefs":{"Monarch":{"xref_id":"0007902"}}}


id: GO:0048183
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta subunits (sometimes known as activin beta or activin/inhibin beta), inhibin beta-A and inhibin beta-B.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005576","GO:0005575"],"is_obsolete":false,"name":"activin AB complex","synonyms":[{"name":"inhibin beta-A","type":"narrow"},{"name":"inhibin beta-B","type":"narrow"}],"termid":"GO:0048183"}


id: GO:0008751
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NAD(P)H dehydrogenase (obsolete GO:0008751)","synonyms":[{"name":"NAD(P)H dehydrogenase","type":"exact"}],"termid":"GO:0008751"}


id: MONDO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An urogenital tuberculosis involving a pathogenic inflammatory response in the fallopian tube.","definition_xrefs":["MONDO:patterns/specific_inflammatory_disease_by_site"],"direct_ancestors":[{"relation_name":"is_a","term_name":"salpingitis","termid":"MONDO:0003619"},{"relation_name":"is_a","term_name":"urogenital tuberculosis","termid":"MONDO:0006002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tuberculous salpingitis","secondary_identifiers":["icd11.foundation:25239933","UMLS:C0275933","ICD9:016.60","SCTID:49558004","DOID:0050166","ICD9:016.6","MEDGEN:546960"],"synonyms":[{"name":"fallopian tube tuberculosis","type":"related"}],"termid":"MONDO:0000271","xrefs":{"Monarch":{"xref_id":"0000271"}}}


id: GO:1900247
data:
  {"annotated_genes":["SJAG_04452","SJAG_04756","SJAG_03677","SJAG_00579"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[112200,97477,116029,111535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140018"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cytoplasmic translational elongation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of translational elongation","termid":"GO:0006448"},{"relation_name":"regulates","term_name":"cytoplasmic translational elongation","termid":"GO:0002182"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00579":null,"SJAG_03677":null,"SJAG_04452":null,"SJAG_04756":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of cytoplasmic translational elongation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1900247","terms_by_termid":{"GO:0140018":null}}


id: MONDO:0015702
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency","termid":"MONDO:0044200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"T-B+ severe combined immunodeficiency due to CD45 deficiency","secondary_identifiers":["Orphanet:169157","DOID:0060014","MEDGEN:1842877","GARD:17052","UMLS:C5679579"],"synonyms":[{"name":"CD45 deficiency","type":"exact"},{"name":"T-B+ SCID due to CD45 deficiency","type":"exact"}],"termid":"MONDO:0015702","xrefs":{"Monarch":{"xref_id":"0015702"}}}


id: GO:0015695
data:
  {"annotated_genes":["SJAG_02344","SJAG_03256","SJAG_02152","SJAG_03400","SJAG_01890","SJAG_04725","SJAG_00991","SJAG_00543","SJAG_04731","SJAG_03591","SJAG_02716","SJAG_05346","SJAG_02125","SJAG_02962","SJAG_04673","SJAG_04588","SJAG_04984","SJAG_02059","SJAG_03970","SJAG_02029","SJAG_01589","SJAG_00626","SJAG_04637","SJAG_03652","SJAG_03808","SJAG_03817","SJAG_02062","SJAG_04135","SJAG_02060","SJAG_04295","SJAG_00835","SJAG_02605"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58331,66750],"is_not":false,"summary":null,"term":"GO:0015695"},{"annotations":[64886],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903712"},{"annotations":[100234,72026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904983"},{"annotations":[102379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097638"},{"annotations":[99362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990818"},{"annotations":[105845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090518"},{"annotations":[64589,100837],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903826"},{"annotations":[99363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[105848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"},{"annotations":[102380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097639"},{"annotations":[99364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089707"},{"annotations":[109942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0160256"},{"annotations":[104818,112074,105849],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090517"},{"annotations":[105850],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090516"},{"annotations":[67011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015825"},{"annotations":[105851],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090514"},{"annotations":[101265],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072489"},{"annotations":[109943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990575"},{"annotations":[90274,104622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990543"},{"annotations":[105652],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990545"},{"annotations":[90097],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905533"},{"annotations":[93756,100892,95338,112591],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905589"},{"annotations":[100893,95339,93757],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905534"},{"annotations":[95340],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905626"},{"annotations":[72524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015847"},{"annotations":[119534,92146,120832,92147],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903090"},{"annotations":[120833,92148,119535,92149],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903091"},{"annotations":[92624],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140300"},{"annotations":[62665,58290,62641,70775,70678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[102698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140125"},{"annotations":[92153,92152],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071934"},{"annotations":[64588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015828"}]},"cv_name":"biological_process","definition":"The directed movement of organic cations into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Organic cations are atoms or small molecules with a positive charge which contain carbon in covalent linkage.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transport","termid":"GO:0006810"}],"gene_count":32,"genes_by_uniquename":{"SJAG_00543":null,"SJAG_00626":null,"SJAG_00835":null,"SJAG_00991":null,"SJAG_01589":null,"SJAG_01890":null,"SJAG_02029":null,"SJAG_02059":null,"SJAG_02060":null,"SJAG_02062":null,"SJAG_02125":null,"SJAG_02152":null,"SJAG_02344":null,"SJAG_02605":null,"SJAG_02716":null,"SJAG_02962":null,"SJAG_03256":null,"SJAG_03400":null,"SJAG_03591":null,"SJAG_03652":null,"SJAG_03808":null,"SJAG_03817":null,"SJAG_03970":null,"SJAG_04135":null,"SJAG_04295":null,"SJAG_04588":null,"SJAG_04637":null,"SJAG_04673":null,"SJAG_04725":null,"SJAG_04731":null,"SJAG_04984":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"organic cation transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0015695","terms_by_termid":{"GO:0015695":null,"GO:0015825":null,"GO:0015828":null,"GO:0015847":null,"GO:0071934":null,"GO:0072489":null,"GO:0089707":null,"GO:0089708":null,"GO:0090513":null,"GO:0090514":null,"GO:0090516":null,"GO:0090517":null,"GO:0090518":null,"GO:0097638":null,"GO:0097639":null,"GO:0140125":null,"GO:0140300":null,"GO:0160256":null,"GO:1903090":null,"GO:1903091":null,"GO:1903711":null,"GO:1903712":null,"GO:1903826":null,"GO:1904983":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null,"GO:1990543":null,"GO:1990545":null,"GO:1990575":null,"GO:1990818":null}}


id: PBO:0064797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase methylesterase 1","termid":"PBO:0064797"}


id: PBO:0043474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNOT10 antisense RNA 1","termid":"PBO:0043474"}


id: GO:0006297
data:
  {"annotated_genes":["SJAG_02818","SJAG_00814","SJAG_02527","SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75964,77037,78829,82158],"is_not":false,"summary":null,"term":"GO:0006297"}]},"cv_name":"biological_process","definition":"Repair of the gap in the DNA helix by DNA polymerase and DNA ligase after the portion of the strand containing the lesion has been removed by pyrimidine-dimer repair enzymes.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA metabolic process","termid":"GO:0006259"},{"relation_name":"part_of","term_name":"nucleotide-excision repair","termid":"GO:0006289"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00814":null,"SJAG_02527":null,"SJAG_02818":null,"SJAG_02908":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006281","GO:0008150","GO:0006259"],"is_obsolete":false,"name":"nucleotide-excision repair, DNA gap filling","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5696397"],"termid":"GO:0006297","terms_by_termid":{"GO:0006297":null}}


id: PBO:0045639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox 4 like 51 (pseudogene)","termid":"PBO:0045639"}


id: PBO:0045872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 beta 2 pseudogene 5","termid":"PBO:0045872"}


id: PBO:0046322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 3","termid":"PBO:0046322"}


id: PBO:0083842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Exocyst subunit with dual roles in exocytosis and spliceosome assembly; subunit of the the exocyst complex which mediates polarized targeting and tethering of post-Golgi secretory vesicles to active sites of exocytosis at the plasma membrane (PM) prior to SNARE-mediated fusion; required for exocyst assembly and targeting the complex to specific sites on the bud tip PM; associates the U1 snRNP; role in pre-mRNA splicing and prespliceosome formation; possible Cdc28 substrate","termid":"PBO:0083842"}


id: PBO:0084916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Modulator of cell separation and mitotic exit; inhibits separation through Ub-dependent Ace2p proteolysis; part of a daughter-specific switch induced by the mitotic exit network that inhibits exit and resets the cell cycle after the execution of  MEN function, blocking Tem1p and Cdc15 association; required for chromosome stability and multiple mitotic checkpoints; regulated by SCF; haploid transcription regulated by Ste12p; contains 12 degenerate leucine-rich repeat motifs and an atypical F-box","termid":"PBO:0084916"}


id: MONDO:0010998
data:
  {"annotated_genes":["SJAG_04952"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88487],"is_not":false,"summary":null,"term":"MONDO:0010998"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation characterized by severe neurological involvement, including hypotonia, developmental delay, intellectual disability, postnatal microcephaly, and progressive brain and cerebellar atrophy. Epilepsy with hypsarrythmia is frequently reported. Additional features that may be observed include failure to thrive, arthrogryposis multiplex congenita (AMC), vision impairment (optic atrophy, iris coloboma) and facial dysmorphism (hypertelorism with a broad nasal bridge, large and thick ears, thin lips, micrognathia). The disease is caused by loss of function mutations of the gene ALG3 (3q27.3).","definition_xrefs":["Orphanet:79321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04952":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"ALG3-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:720976009","MEDGEN:322026","MESH:C535742","NCIT:C126870","UMLS:C1832736","OMIM:601110","GARD:9827","DOID:0080556"],"synonyms":[{"name":"ALG3-CDG","type":"exact"},{"name":"ALG3-CDG (CDG-Id)","type":"related"},{"name":"ALG3-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1D","type":"related"},{"name":"CDG Id","type":"related"},{"name":"CDG syndrome type Id","type":"exact"},{"name":"CDG-Id","type":"exact"},{"name":"CDG1D","type":"exact"},{"name":"CDGId","type":"exact"},{"name":"CDGS, type IV","type":"related"},{"name":"CDGS, type IV, formerly","type":"related"},{"name":"CDGS4 (formerly)","type":"related"},{"name":"carbohydrate deficient glycoprotein syndrome type Id","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type IV (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type IV","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type IV, formerly","type":"related"},{"name":"congenital disorder of glycosylation type 1d","type":"exact"},{"name":"congenital disorder of glycosylation type Id","type":"exact"},{"name":"congenital disorder of glycosylation, type Id","type":"related"},{"name":"mannosyltransferase 6 deficiency","type":"exact"}],"termid":"MONDO:0010998","terms_by_termid":{"MONDO:0010998":null},"xrefs":{"Monarch":{"xref_id":"0010998"}}}


id: PBO:0081433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 285C, pseudogene","termid":"PBO:0081433"}


id: GO:0001804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type III hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type III hypersensitivity","termid":"GO:0001803"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"is_a","term_name":"negative regulation of myeloid leukocyte mediated immunity","termid":"GO:0002887"},{"relation_name":"is_a","term_name":"negative regulation of immunoglobulin mediated immune response","termid":"GO:0002890"},{"relation_name":"negatively_regulates","term_name":"type III hypersensitivity","termid":"GO:0001802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type III hypersensitivity","synonyms":[{"name":"down regulation of type III hypersensitivity","type":"exact"},{"name":"down-regulation of type III hypersensitivity","type":"exact"},{"name":"downregulation of type III hypersensitivity","type":"exact"},{"name":"inhibition of type III hypersensitivity","type":"narrow"}],"termid":"GO:0001804"}


id: GO:0020023
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A sub-structure within the large single mitochondrion of kinetoplastid parasites and which is closely associated with the flagellar pocket and basal body of the flagellum.","definition_xrefs":["GOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"mitochondrion","termid":"GO:0005739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005739","GO:0005737"],"is_obsolete":false,"name":"kinetoplast","secondary_identifiers":["Wikipedia:Kinetoplast"],"termid":"GO:0020023"}


id: GO:0004353
data:
  {"annotated_genes":["SJAG_03266"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74940],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004354"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamate + H2O + NAD(P)+ = 2-oxoglutarate + NH3 + NAD(P)H + H+.","definition_xrefs":["EC:1.4.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03266":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"glutamate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70589","Reactome:R-HSA-70600","MetaCyc:GLUTAMATE-DEHYDROGENASE-NADP+-RXN"],"synonyms":[{"name":"L-glutamate:NAD(P)+ oxidoreductase (deaminating)","type":"related"},{"name":"glutamate biosynthesis, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamate biosynthetic process, using glutamate dehydrogenase (NAD(P)+)","type":"related"},{"name":"glutamic dehydrogenase activity","type":"broad"}],"termid":"GO:0004353","terms_by_termid":{"GO:0004354":null}}


id: PR:O94346
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1271.14 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94346"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine biosynthesis bifunctional protein ArgJ, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1271.14","synonyms":[{"name":"Spom972h-SPBC1271.14","type":"exact"}],"termid":"PR:O94346"}


id: PBO:0050943
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 14","termid":"PBO:0050943"}


id: FYPO:0005133
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the ascospore wall is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization during meiotic cell cycle","termid":"FYPO:0004094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to ascospore wall","synonyms":[{"name":"decreased protein localisation to ascospore wall","type":"exact"},{"name":"decreased protein localization to spore wall","type":"exact"},{"name":"reduced protein localization to ascospore wall","type":"exact"}],"termid":"FYPO:0005133"}


id: GO:0006386
data:
  {"annotated_genes":["SJAG_00637","SJAG_02242","SJAG_03761","SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57440,62102,101904,118050],"is_not":false,"summary":null,"term":"GO:0006386"}]},"cv_name":"biological_process","definition":"A transcription termination process that completes the production of a primary RNA polymerase II transcript. RNA polymerase III has an intrinsic ability to terminate transcription upon incorporation of at least 4 contiguous U residues.","definition_xrefs":["PMID:12944462","PMID:27371117","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription termination","termid":"GO:0006353"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00637":null,"SJAG_02242":null,"SJAG_03689":null,"SJAG_03761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0006351","GO:0008150"],"is_obsolete":false,"name":"termination of RNA polymerase III transcription","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0019225","Reactome:R-HSA-73980"],"synonyms":[{"name":"RNA polymerase III transcription termination","type":"exact"},{"name":"RNA polymerase III transcription termination factor activity","type":"related"},{"name":"transcription termination from Pol III promoter","type":"exact"},{"name":"transcription termination from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006386","terms_by_termid":{"GO:0006386":null}}


id: GO:0006109
data:
  {"annotated_genes":["SJAG_01376","SJAG_04659","SJAG_04509","SJAG_05006","SJAG_01787","SJAG_04668","SJAG_03705","SJAG_04771","SJAG_02785","SJAG_02278","SJAG_04666","SJAG_00424","SJAG_00685","SJAG_00698","SJAG_04462","SJAG_00534","SJAG_01255","SJAG_00610","SJAG_05314","SJAG_00963"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[94991,113936],"is_not":false,"summary":null,"term":"GO:0006109"},{"annotations":[80963,79044],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045719"},{"annotations":[75038,78092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[98586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001172"},{"annotations":[91703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[89519,94430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140748"},{"annotations":[89903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032951"},{"annotations":[119972,120105,92779,69629,94414,107371,107942],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090334"},{"annotations":[104864,91448,94436,96953],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070610"},{"annotations":[71970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[78091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving carbohydrates.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of primary metabolic process","termid":"GO:0080090"},{"relation_name":"regulates","term_name":"carbohydrate metabolic process","termid":"GO:0005975"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00424":null,"SJAG_00534":null,"SJAG_00610":null,"SJAG_00685":null,"SJAG_00698":null,"SJAG_00963":null,"SJAG_01255":null,"SJAG_01376":null,"SJAG_01787":null,"SJAG_02278":null,"SJAG_02785":null,"SJAG_03705":null,"SJAG_04462":null,"SJAG_04509":null,"SJAG_04659":null,"SJAG_04666":null,"SJAG_04668":null,"SJAG_04771":null,"SJAG_05006":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of carbohydrate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of carbohydrate metabolism","type":"exact"}],"termid":"GO:0006109","terms_by_termid":{"GO:0006109":null,"GO:0006110":null,"GO:0032951":null,"GO:0043456":null,"GO:0045719":null,"GO:0045820":null,"GO:0070610":null,"GO:0090334":null,"GO:0140748":null,"GO:1905857":null,"GO:2001172":null}}


id: PBO:0075196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 8","termid":"PBO:0075196"}


id: FYPO:0004771
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar glycine level","synonyms":[{"name":"increased level of glycine in vacuole","type":"exact"},{"name":"increased vacuolar glycine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glycine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004771"}


id: GO:0052115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism in the environment of its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis in host environment (obsolete GO:0052115)","synonyms":[{"name":"energy taxis in response to host environment","type":"exact"}],"termid":"GO:0052115"}


id: GO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 1-methylguanosine.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanosine-containing compound metabolic process","termid":"GO:1901068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"1-methylguanosine metabolic process","termid":"GO:0080179"}


id: GO:1905802
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellular response to manganese ion.","definition_xrefs":["PMID:23721876","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"regulates","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cellular response to manganese ion","synonyms":[{"name":"regulation of cellular response to manganese","type":"exact"}],"termid":"GO:1905802"}


id: PBO:0061714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUT midline carcinoma family member 1","termid":"PBO:0061714"}


id: PBO:0066819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 118","termid":"PBO:0066819"}


id: PBO:0085514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S15 and bacterial S19","termid":"PBO:0085514"}


id: GO:0000254
data:
  {"annotated_genes":["SJAG_03018"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71807],"is_not":false,"summary":null,"term":"GO:0000254"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 4,4-dimethyl-5alpha-cholest-7-en-3beta-ol + 6 Fe(II)-[cytochrome b5] + 5 H+ + 3 O2 = 4alpha-carboxy-4beta-methyl-5alpha-cholest-7-ene-3beta-ol + 6 Fe(III)-[cytochrome b5] + 4 H2O.","definition_xrefs":["RHEA:55220","PMID:9811880"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"C-4 methylsterol oxidase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-194641","EC:1.14.18.9","MetaCyc:RXN-13188","Reactome:R-HSA-194669"],"synonyms":[{"name":"4-methylsterol oxidase activity","type":"exact"},{"name":"methylsterol hydroxylase activity","type":"related"},{"name":"methylsterol monooxygenase activity","type":"related"}],"termid":"GO:0000254","terms_by_termid":{"GO:0000254":null}}


id: PBO:0084154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity S-adenosylmethionine permease; required for utilization of S-adenosylmethionine as a sulfur source; has similarity to S-methylmethionine permease Mmp1p","termid":"PBO:0084154"}


id: PBO:0004037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleosome assembly protein (predicted)","termid":"PBO:0004037"}


id: GO:0035472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the choriogonadotropin hormone to initiate a change in cell activity.","definition_xrefs":["GOC:bf","PMID:1922095","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor activity","termid":"GO:0004930"},{"relation_name":"is_a","term_name":"protein-hormone receptor activity","termid":"GO:0016500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"choriogonadotropin hormone receptor activity","synonyms":[{"name":"CG receptor activity","type":"exact"},{"name":"chorio-gonadotrophin receptor activity","type":"exact"},{"name":"chorionic gonadotropin hormone receptor","type":"exact"}],"termid":"GO:0035472"}


id: GO:0007287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fusion of mitochondria during insect spermatid differentiation to form two masses, which wrap around each other to form a densely packed sphere called the Nebenkern.","definition_xrefs":["GOC:bf","PMID:9550716","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"Nebenkern assembly","synonyms":[{"name":"Nebenkern formation","type":"related"}],"termid":"GO:0007287"}


id: GO:0098900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of action potential creation, propagation or termination. This typically occurs via modulation of the activity or expression of voltage-gated ion channels.","definition_xrefs":["GOC:dph","ISBN:978-0-07-139011-8","GOC:go_curators","GOC:tb","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of membrane potential","termid":"GO:0042391"},{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"action potential","termid":"GO:0001508"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of action potential","termid":"GO:0098900"}


id: GO:0045243
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Cytosolic complex that possesses isocitrate dehydrogenase (NAD+) activity.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic isocitrate dehydrogenase complex (NAD+) (obsolete GO:0045243)","synonyms":[{"name":"isocitrate dehydrogenase complex (NAD+)","type":"broad"}],"termid":"GO:0045243"}


id: MONDO:0100306
data:
  {"annotated_genes":["SJAG_04823"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013571"}]},"cv_name":"mondo","definition":"Any peroxisomal single enzyme/protein defect that has its basis in the disruption of peroxisome oxidation.","definition_xrefs":["MONDO:patterns/disrupts_process"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisomal single enzyme/protein defect","termid":"MONDO:0100257"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04823":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019053"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053"],"is_obsolete":false,"name":"disorder of defective peroxisome oxidative status","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"disorder of defective peroxisome oxidative status","type":"exact"}],"termid":"MONDO:0100306","terms_by_termid":{"MONDO:0013571":null},"xrefs":{"Monarch":{"xref_id":"0100306"}}}


id: PBO:0121105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CA14 pseudogene 1","termid":"PBO:0121105"}


id: PBO:0071215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 56","termid":"PBO:0071215"}


id: GO:0097458
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a neuron, the basic cellular unit of nervous tissue. A typical neuron consists of a cell body (often called the soma), an axon, and dendrites. Their purpose is to receive, conduct, and transmit impulses in the nervous system.","definition_xrefs":["Wikipedia:Neuron","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete neuron part (obsolete GO:0097458)","termid":"GO:0097458"}


id: GO:0098842
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An early endosome of the postsynapse. It acts as the major sorting station on the endocytic pathway, targeting neurotransmitter receptors for degregation or recycling.","definition_xrefs":["PMID:20820847","PMID:19603039","PMID:24727350"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early endosome","termid":"GO:0005769"},{"relation_name":"is_a","term_name":"postsynaptic endosome","termid":"GO:0098845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737","GO:0005768"],"is_obsolete":false,"name":"postsynaptic early endosome","termid":"GO:0098842"}


id: PBO:0077325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 63A","termid":"PBO:0077325"}


id: GO:0019311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving sorbose, the ketohexose xylo-2-hexulose. Sorbose is produced commercially by fermentation and is used as an intermediate in the manufacture of ascorbic acid.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete sorbose metabolic process (obsolete GO:0019311)","synonyms":[{"name":"sorbose metabolism","type":"exact"}],"termid":"GO:0019311"}


id: PBO:0004975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 protein family 10","termid":"PBO:0004975"}


id: GO:0102402
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-phenylethyl 6-O-beta-D-xylopyranosyl-beta-D-glucopyranoside + H2O = 2-phenylethanol + 6-O-(beta-D-xylopyranosyl)-beta-D-glucopyranose.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-phenylethyl 6-O-beta-D-xylopyranosyl-beta-D-glucopyranoside glucosidase (Yabukita) activity (obsolete GO:0102402)","termid":"GO:0102402"}


id: GO:0016593
data:
  {"annotated_genes":["SJAG_00139","SJAG_03118","SJAG_04933","SJAG_01151","SJAG_01610"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68712,73047,74477,78211,80579],"is_not":false,"summary":null,"term":"GO:0016593"}]},"cv_name":"cellular_component","definition":"A multiprotein complex that associates with RNA polymerase II and general RNA polymerase II transcription factor complexes and may be involved in both transcriptional initiation and elongation. In Saccharomyces the complex contains Paf1p, Cdc73p, Ctr9p, Rtf1p, and Leo1p.","definition_xrefs":["PMID:11884586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription elongation factor complex","termid":"GO:0008023"},{"relation_name":"part_of","term_name":"RNA polymerase II, holoenzyme","termid":"GO:0016591"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00139":null,"SJAG_01151":null,"SJAG_01610":null,"SJAG_03118":null,"SJAG_04933":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005654","GO:0005575","GO:0005634"],"is_obsolete":false,"name":"Cdc73/Paf1 complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"Paf1 complex","type":"exact"},{"name":"Paf1p complex","type":"exact"}],"termid":"GO:0016593","terms_by_termid":{"GO:0016593":null}}


id: PBO:0067901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 203","termid":"PBO:0067901"}


id: PBO:0038620
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaline ceramidase 2","termid":"PBO:0038620"}


id: PR:O13923
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- crn1 gene.","definition_xrefs":["UniProtKB:O13923","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coronin-like protein crn1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.02","synonyms":[{"name":"Spom972h-crn1","type":"exact"}],"termid":"PR:O13923"}


id: GO:1900692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of (+)-kotanin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"(+)-kotanin biosynthetic process","termid":"GO:1900596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of (+)-kotanin biosynthetic process","synonyms":[{"name":"regulation of (+)-kotanin anabolism","type":"exact"},{"name":"regulation of (+)-kotanin biosynthesis","type":"exact"},{"name":"regulation of (+)-kotanin formation","type":"exact"},{"name":"regulation of (+)-kotanin synthesis","type":"exact"}],"termid":"GO:1900692"}


id: PBO:0003182
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"horsetail movement protein Hrs1","termid":"PBO:0003182"}


id: MONDO:0035474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete PIEZO1-related generalized lymphatic dysplasia with non-immune hydrops fetalis (obsolete MONDO:0035474)","secondary_identifiers":["GARD:22301"],"termid":"MONDO:0035474","xrefs":{"Monarch":{"xref_id":"0035474"}}}


id: MONDO:0010595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Sertoli cell-only syndrome (obsolete MONDO:0010595)","secondary_identifiers":["EFO:1001422"],"termid":"MONDO:0010595","xrefs":{"Monarch":{"xref_id":"0010595"}}}


id: MONDO:0005327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Traumatic or pathological injury to the hip in which the continuity of either the femoral head, femoral neck, intertrochanteric or subtrochanteric regions is broken. Symptoms include pain in the hip or groin, bruising and swelling in and around the hip area. The injured hip is turned outward and the leg appears shorter on that side.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone fracture","termid":"MONDO:0005315"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hip fracture","secondary_identifiers":["MESH:D006620","EFO:0003964","SCTID:263225007"],"termid":"MONDO:0005327","xrefs":{"Monarch":{"xref_id":"0005327"}}}


id: PATO:0001377
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing more than two homologous sets of chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Polyploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyploid","termid":"PATO:0001377"}


id: PBO:0069891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1180, pseudogene","termid":"PBO:0069891"}


id: GO:0030752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5-hydroxyfurocoumarin + S-adenosyl-L-methionine = a 5-methoxyfurocoumarin + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["RHEA:18861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"5-hydroxyfuranocoumarin 5-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-8448","EC:2.1.1.69","GO:0030764"],"synonyms":[{"name":"BMT activity","type":"related"},{"name":"S-adenosyl-L-methionine:5-hydroxyfuranocoumarin 5-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:5-hydroxyfurocoumarin 5-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:bergaptol O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:bergaptolO-methyltransferase activity","type":"related"},{"name":"bergaptol 5-O-methyltransferase activity","type":"related"},{"name":"bergaptol O-methyltransferase activity","type":"related"},{"name":"bergaptol methyltransferase activity","type":"related"},{"name":"furanocoumarin 5-O-methyltransferase activity","type":"related"},{"name":"furanocoumarin 5-methyltransferase activity","type":"related"}],"termid":"GO:0030752"}


id: GO:0002612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of plasmacytoid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell antigen processing and presentation","termid":"GO:0002606"},{"relation_name":"is_a","term_name":"regulation of plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002610"},{"relation_name":"positively_regulates","term_name":"plasmacytoid dendritic cell antigen processing and presentation","termid":"GO:0002470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of plasmacytoid dendritic cell antigen processing and presentation","synonyms":[{"name":"activation of plasmacytoid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of plasmacytoid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"},{"name":"upregulation of plasmacytoid dendritic cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002612"}


id: MONDO:0011792
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial thyroid dyshormonogenesis in which the cause of the disease is a mutation in the DUOX2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thyroid dyshormonogenesis","termid":"MONDO:0010132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid dyshormonogenesis 6","secondary_identifiers":["DOID:0112189","MESH:C564608","GARD:18193","MEDGEN:375935","UMLS:C1846632","OMIM:607200"],"synonyms":[{"name":"DUOX2 familial thyroid dyshormonogenesis","type":"exact"},{"name":"TDH6","type":"related"},{"name":"familial thyroid dyshormonogenesis caused by mutation in DUOX2","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 6","type":"related"},{"name":"thyroid dyshormonogenesis 6","type":"exact"},{"name":"thyroid dyshormonogenesis type 6","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 6","type":"related"}],"termid":"MONDO:0011792","xrefs":{"Monarch":{"xref_id":"0011792"}}}


id: PBO:0003335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endoribonuclease (predicted)","termid":"PBO:0003335"}


id: GO:0042786
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any mechanism of active immune avoidance which works by regulating the host's antigen processing or presentation pathways, e.g. by blocking any stage in MHC class II presentation. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:12439615"],"gene_count":0,"genotype_count":0,"name":"obsolete evasion of host immune response via modulation of host antigen processing and presentation (obsolete GO:0042786)","synonyms":[{"name":"active evasion of host immune response via regulation of host antigen processing and presentation","type":"related"},{"name":"active evasion of host immune response via regulation of host antigen processing and presentation pathway","type":"exact"},{"name":"active evasion of immune response of other organism via regulation of antigen processing and presentation in other organism involved in symbiotic interaction","type":"broad"},{"name":"active immune evasion via modulation of antigen processing and presentation","type":"exact"},{"name":"active immune evasion via modulation of antigen processing/presentation","type":"exact"},{"name":"active immune evasion via regulation of antigen processing and presentation","type":"exact"},{"name":"evasion of host immune response via regulation of host antigen processing and presentation","type":"exact"}],"termid":"GO:0042786"}


id: PBO:0042924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorionic gonadotropin subunit beta 2","termid":"PBO:0042924"}


id: GO:0021894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a cerebral cortex GABAergic interneuron over time, from initial commitment to its fate, to the fully functional differentiated cell.","definition_xrefs":["GO_REF:0000021","GOC:dgh","GOC:cls","GOC:dph","GOC:jid","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"forebrain neuron development","termid":"GO:0021884"},{"relation_name":"part_of","term_name":"cerebral cortex GABAergic interneuron differentiation","termid":"GO:0021892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex GABAergic interneuron development","termid":"GO:0021894"}


id: PBO:0119664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member H1","termid":"PBO:0119664"}


id: PBO:0011056
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_direct_input","termid":"PBO:0011056"}


id: FYPO:0005471
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which glutamate synthase activity using NADH as a cofactor is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal glutamate synthase (NADH) activity","termid":"FYPO:0005470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0001985","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"abolished glutamate synthase (NADH) activity","synonyms":[{"name":"abolished L-glutamate synthase (NADH) activity","type":"exact"},{"name":"abolished NADH-dependent glutamate synthase activity","type":"exact"},{"name":"abolished NADH: GOGAT activity","type":"related"},{"name":"abolished glutamate (reduced nicotinamide adenine dinucleotide) synthase","type":"exact"},{"name":"glutamate synthase (NADH) activity abolished","type":"exact"}],"termid":"FYPO:0005471"}


id: MONDO:0001202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"prostate disorder","termid":"MONDO:0003105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostatic cyst","secondary_identifiers":["MEDGEN:731233","ICD9:600.3","SCTID:409658007","UMLS:C1443972","ICD9:599.89","DOID:11133","ICD10CM:N42.83"],"synonyms":[{"name":"cyst of prostate","type":"exact"}],"termid":"MONDO:0001202","xrefs":{"Monarch":{"xref_id":"0001202"}}}


id: PBO:0017073
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement S. cerevisiae RPR1","termid":"PBO:0017073"}


id: PR:Q09828
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A leucine--tRNA ligase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine--tRNA ligase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G8.09","secondary_identifiers":["UniProtKB:Q09828"],"synonyms":[{"name":"LeuRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LARS2","type":"exact"},{"name":"leucyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09828"}


id: PR:000036299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonucleoside-diphosphate reductase small chain that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:12867051","PRO:DAN","PMID:20516199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside-diphosphate reductase small chain","termid":"PR:000027713"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleoside-diphosphate reductase small chain (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC25D12.04","synonyms":[{"name":"SPBC25D12.04","type":"related"},{"name":"SUC22","type":"related"},{"name":"Spom-suc22","type":"exact"}],"termid":"PR:000036299"}


id: PBO:0091331
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. nidulans PpzA","termid":"PBO:0091331"}


id: PBO:0090993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HbrB family protein involved in TOR signaling Bit2","termid":"PBO:0090993"}


id: PBO:0050138
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 48","termid":"PBO:0050138"}


id: GO:0061331
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells, resulting in the expansion of a cell population and contributing to the shaping of a Malpighian tubule.","definition_xrefs":["GOC:mtg_kidney_jan10","PMID:19783135","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation involved in renal tubule morphogenesis","termid":"GO:2001013"},{"relation_name":"part_of","term_name":"Malpighian tubule morphogenesis","termid":"GO:0007443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in Malpighian tubule morphogenesis","termid":"GO:0061331"}


id: MONDO:0005661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Babesiosis refers to a condition caused by microscopic parasites that infect the red blood cells. Many people who are infected with Babesia parasites do not experience any symptoms of the condition. When present, signs and symptoms may include flu-like symptoms such as fever, chills, headache, body aches, nausea and fatigue. In severe cases, babesiosis can be associated with hemolytic anemia. Babesia parasites are primarily spread by infected ticks. Treatment is generally only required in people who develop symptoms of the condition. When necessary, affected people are often prescribed a combination of antimicrobial medications along with supportive care to manage symptoms.","direct_ancestors":[{"relation_name":"is_a","term_name":"protozoa infectious disease","termid":"MONDO:0002428"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"babesiosis","secondary_identifiers":["SCTID:21061004","UMLS:C0004576","GARD:5878","Orphanet:108","ICD10CM:B60.0","MedDRA:10003965","icd11.foundation:1947003329","MEDGEN:2523","NCIT:C84581","DOID:9643","ICD9:088.82","EFO:0007162","MESH:D001404","NORD:832"],"synonyms":[{"name":"Babesia caused disease or disorder","type":"exact"},{"name":"Babesia disease or disorder","type":"exact"},{"name":"Babesia infectious disease","type":"exact"},{"name":"Babesia parasite infection","type":"related"},{"name":"Human babesiosis","type":"related"},{"name":"babesiasis","type":"exact"},{"name":"infection by Babesia","type":"exact"},{"name":"piroplasmosis","type":"exact"}],"termid":"MONDO:0005661","xrefs":{"Monarch":{"xref_id":"0005661"}}}


id: GO:0060372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the establishment or extent of a membrane potential in the polarizing direction towards the resting potential in an atrial cardiomyocyte.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiac muscle cell membrane repolarization","termid":"GO:0099623"},{"relation_name":"regulates","term_name":"atrial cardiac muscle cell membrane repolarization","termid":"GO:0099624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of atrial cardiac muscle cell membrane repolarization","synonyms":[{"name":"atrial repolarization","type":"related"},{"name":"electrocardiogram QRS complex","type":"related"},{"name":"regulation of atrial cardiac muscle cell repolarization","type":"exact"},{"name":"regulation of atrial cardiomyocyte membrane repolarization","type":"exact"}],"termid":"GO:0060372"}


id: MONDO:0006762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition occurring in the female offspring of dizygotic twins (twin, dizygotic) in a mixed-sex pregnancy, usually in cattle. Freemartinism can occur in other mammals. When placental fusion between the male and the female fetuses permits the exchange of fetal cells and fetal hormones, testicular hormones from the male fetus can androgenize the female fetus producing a sterile xx/xy chimeric 'female'(chimerism).","definition_xrefs":["MESH:D005611"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"difference of sexual differentiation, non-human animal","termid":"MONDO:0700105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"freemartinism","secondary_identifiers":["EFO:1000939","DOID:4671"],"termid":"MONDO:0006762","xrefs":{"Monarch":{"xref_id":"0006762"}}}


id: GO:0097600
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A xylanase activity that acts on one of the ends of a xylan polymer which does not contain side chains.","definition_xrefs":["GOC:jh2","PMID:16535010","ISBN:81-7736-269-0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xylanase activity","termid":"GO:0097599"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016798","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"exoxylanase activity","termid":"GO:0097600"}


id: MONDO:0010542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any dilated cardiomyopathy in which the cause of the disease is a mutation in the DMD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative defects of dystrophin","termid":"MONDO:0016147"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 3B","secondary_identifiers":["OMIM:302045","DOID:0081164","MEDGEN:777148","DOID:0110461","DOID:0060561","GARD:15287","MESH:C580047","SCTID:702424003","UMLS:C3668940","ICD9:425.4"],"synonyms":[{"name":"CMD3B","type":"exact"},{"name":"DMD dilated cardiomyopathy","type":"exact"},{"name":"DMD-related dilated cardiomyopathy","type":"related"},{"name":"X-linked dilated cardiomyopathy","type":"related"},{"name":"cardiomyopathy, dilated, 3B","type":"related"},{"name":"cardiomyopathy, dilated, X-linked","type":"related"},{"name":"cardiomyopathy, dilated, type 3B","type":"exact"},{"name":"dilated cardiomyopathy 3B","type":"exact"},{"name":"dilated cardiomyopathy caused by mutation in DMD","type":"exact"},{"name":"dilated cardiomyopathy type 3B","type":"exact"}],"termid":"MONDO:0010542","xrefs":{"Monarch":{"xref_id":"0010542"}}}


id: PBO:0058853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8082","termid":"PBO:0058853"}


id: MONDO:1012285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular arrhythmias and sudden death, non-human animal","termid":"MONDO:1011645"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ventricular arrhythmias and sudden death, dog","secondary_identifiers":["OMIA:001040-9615"],"termid":"MONDO:1012285","xrefs":{"Monarch":{"xref_id":"1012285"}}}


id: GO:0160254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of tRNA queuosine(34) by salvaging available queuosine or precursors of queuosine (preQ0 or preQ1).","definition_xrefs":["MetaCyc:PWY-8106","PMID:28208705"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA queuosine(34) biosynthetic process","termid":"GO:0008616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tRNA queuosine(34) biosynthetic process from salvaged queuosine or its precursors","termid":"GO:0160254"}


id: PBO:0110115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi Ras-interacting protein with DIL domain, human RADIL and RASIP1 ortholog (predicted), implicated in cytoskeleton organization","termid":"PBO:0110115"}


id: MONDO:0001211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye accommodation disease","termid":"MONDO:0000926"},{"relation_name":"is_a","term_name":"oculomotor nerve paralysis","termid":"MONDO:0001309"},{"relation_name":"is_a","term_name":"pupil disorder","termid":"MONDO:0002285"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"total internal ophthalmoplegia","secondary_identifiers":["SCTID:86266009","UMLS:C0152197","DOID:11177","ICD9:367.52","MEDGEN:508924"],"termid":"MONDO:0001211","xrefs":{"Monarch":{"xref_id":"0001211"}}}


id: GO:0002168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larva over time, from its formation to the mature structure. This begins with the newly hatched first-instar larva, through its maturation to the end of the last larval stage. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"larval development","termid":"GO:0002164"},{"relation_name":"is_a","term_name":"instar larval or pupal development","termid":"GO:0002165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"instar larval development","termid":"GO:0002168"}


id: FYPO:0002985
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular response to methyl methanesulfonate is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA level during cellular response to methyl methanesulfonate","synonyms":[{"name":"increased RNA accumulation during cellular response to methyl methanesulfonate","type":"related"},{"name":"increased RNA level during cellular response to MMS","type":"exact"},{"name":"increased RNA level during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"related"},{"name":"increased RNA level during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"},{"name":"increased RNA level during cellular response to methyl methanesulphonate","type":"exact"},{"name":"increased mRNA level during cellular response to methyl methanesulfonate","type":"narrow"},{"name":"increased transcript level during cellular response to methyl methanesulfonate","type":"exact"}],"termid":"FYPO:0002985"}


id: GO:0016587
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains an Isw1 subunit from the ISWI-family of ATPases and acts to modify chromatin structure.","definition_xrefs":["PMID:15284901","GOC:krc","GOC:mah","PMID:15020051","PMID:16568949","PMID:21810179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ISWI-type complex","termid":"GO:0031010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0005694"],"is_obsolete":false,"name":"Isw1 complex","termid":"GO:0016587"}


id: PBO:0053240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 4","termid":"PBO:0053240"}


id: FYPO:0002459
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, branched, septated, and elongated.","definition_xrefs":["PomBase:mah","PomBase:jh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"},{"relation_name":"is_a","term_name":"branched, elongated, septated cell","termid":"FYPO:0004594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0001320","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"viable branched, elongated vegetative cell","secondary_identifiers":["FYPO:0002458"],"synonyms":[{"name":"viable branched cell during vegetative growth","type":"exact"},{"name":"viable branched elongated vegetative cell","type":"exact"},{"name":"viable branched vegetative cell","type":"exact"},{"name":"viable branched vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated cell during vegetative growth","type":"exact"},{"name":"viable branched, elongated vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, elongated, septated cell","type":"exact"},{"name":"viable branched, long, septated cell","type":"exact"},{"name":"viable branched, septated cell","type":"exact"},{"name":"viable elongated branched cell","type":"exact"}],"termid":"FYPO:0002459"}


id: PBO:0067158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 210, pseudogene","termid":"PBO:0067158"}


id: PBO:0011617
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_session","termid":"PBO:0011617"}


id: FYPO:0006670
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a haploid cell undergoes meiotic cell cycle.","definition_xrefs":["PMID:31278118","PMID:9755190","PomBase:mlr","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"meiotic cell cycle entry in haploid cell","synonyms":[{"name":"haploid meiosis","type":"narrow"},{"name":"meiosis in haploid cell","type":"related"}],"termid":"FYPO:0006670"}


id: MONDO:0019476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary cutaneous T-cell lymphoma","termid":"MONDO:0015758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"primary cutaneous peripheral T-cell lymphoma not otherwise specified","secondary_identifiers":["NCIT:C201080","MEDGEN:38240","GARD:19078","Orphanet:86885","UMLS:C0079774","MESH:D016411","ICD10CM:C84.4","MedDRA:10034623"],"synonyms":[{"name":"primary cutaneous unspecified peripheral T-cell lymphoma","type":"exact"}],"termid":"MONDO:0019476","xrefs":{"Monarch":{"xref_id":"0019476"}}}


id: GO:0052208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism effects a change in the structure or function of a second organism, mediated by a substance secreted by a type IV secretion system in the first organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete modification of morphology or physiology of other organism via substance secreted by type IV secretion system involved in symbiotic interaction (obsolete GO:0052208)","synonyms":[{"name":"modification of morphology or physiology of other organism via substance secreted by type IV secretion system during symbiotic interaction","type":"related"}],"termid":"GO:0052208"}


id: MONDO:0035237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare subtype of pyoderma gangrenosum disease characterized by grouped vesicles that rapidly spread and coalesce to form large bullae, which evolve into ulcerations that have an erythematous peripheral halo and central necrosis, mainly affecting the upper limbs and face. Lymphoproliferative diseases are frequently associated, thus prognosis is often compromised.","definition_xrefs":["Orphanet:538869"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma gangrenosum","termid":"MONDO:0018824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"bullous pyoderma gangrenosum","secondary_identifiers":["GARD:22222","UMLS:C0406687","ICD10CM:L88","MEDGEN:590609"],"synonyms":[{"name":"Phemphigoid pyoderma gangrenosum","type":"exact"}],"termid":"MONDO:0035237","xrefs":{"Monarch":{"xref_id":"0035237"}}}


id: PBO:0045269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 9","termid":"PBO:0045269"}


id: MONDO:0018630
data:
  {"annotated_genes":["SJAG_02226","SJAG_01620","SJAG_02187","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007356"},{"annotations":[87168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012249"},{"annotations":[87618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013699"},{"annotations":[87620],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013710"},{"annotations":[87631,87630],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008018"}]},"cv_name":"mondo","definition":"Hereditary nonpolyposis colon cancer (HNPCC) is a cancer-predisposing condition characterized by the development of colorectal cancer not associated with colorectal polyposis, endometrial cancer, and various other cancers (such as malignant epithelial tumor of ovary, gastric, biliary tract, small bowel, and urinary tract cancer) that are frequently diagnosed at an early age.","definition_xrefs":["Orphanet:443909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"familial colorectal cancer","termid":"MONDO:0023113"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01620":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02748":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"hereditary nonpolyposis colon cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1333990","MEDGEN:232602","OMIMPS:120435","NCIT:C120083","SCTID:315058005"],"synonyms":[{"name":"HNPCC","type":"exact"},{"name":"Hereditary nonpolyposis colorectal cancer (HNPCC)","type":"exact"},{"name":"colorectal cancer, hereditary nonpolyposis","type":"exact"},{"name":"familial nonpolyposis colon cancer","type":"exact"},{"name":"familial nonpolyposis colorectal cancer","type":"exact"},{"name":"hereditary nonpolyposis colon cancer","type":"exact"},{"name":"hereditary nonpolyposis colorectal cancer","type":"exact"}],"termid":"MONDO:0018630","terms_by_termid":{"MONDO:0007356":null,"MONDO:0008018":null,"MONDO:0012249":null,"MONDO:0013699":null,"MONDO:0013710":null},"xrefs":{"Monarch":{"xref_id":"0018630"}}}


id: GO:0047379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H2O + a short-chain acyl-CoA = a short-chain carboxylate + CoA.","definition_xrefs":["MetaCyc:3.1.2.18-RXN","EC:3.1.2.18"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP-dependent short-chain-acyl-CoA hydrolase activity (obsolete GO:0047379)","synonyms":[{"name":"ADP-dependent propionyl coenzyme A hydrolase activity","type":"narrow"},{"name":"ADP-dependent propionyl-CoA hydrolase activity","type":"narrow"},{"name":"ADP-dependent propionyl-CoA thioesterase activity","type":"narrow"},{"name":"ADP-dependent short-chain acyl-CoA hydrolase activity","type":"related"},{"name":"ADP-dependent short-chain acyl-CoA thioesterase activity","type":"related"},{"name":"ADP-dependent-short-chain-acyl-CoA hydrolase activity","type":"related"}],"termid":"GO:0047379"}


id: MONDO:0005122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A bacterial infection induced by Pectobacterium carotovorum which is is a bacterium of the family Enterobacteriaceae. This bacterius is a ubiquitous plant pathogen with a wide host range (carrot, potato, tomato, leafy greens, squash and other cucurbits, onion, green peppers, African violets etc.), able to cause disease in almost any plant tissue it invades. It is a very economically important pathogen in terms of postharvest losses, and a common cause of decay in stored fruits and vegetables. Decay caused by E. carotovora is often simply referred to as \\\"bacterial soft rot\\\" (BSR) though this may also be caused by other bacteria. Most plants or plant parts can resist invasion by the bacteria, unless some type of wound is present. High humidity and temperatures around 30°C favor development of decay. Mutants can be produced which are less virulent. Virulence factors include: pectinases, cellulases, (which degrade plant cell walls), and also proteases, lipases, xylanases and nucleases (along with the normal virulence factors for pathogens – Fe acquisition, LPS integrity, multiple global regulatory systems).","definition_xrefs":["EFO:0000781"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pectobacterium carotovorum infection","secondary_identifiers":["Wikipedia:Pectobacterium_carotovorum"],"synonyms":[{"name":"Pectobacterium caused disease or disorder","type":"exact"},{"name":"Pectobacterium disease or disorder","type":"exact"},{"name":"Pectobacterium infectious disease","type":"exact"}],"termid":"MONDO:0005122","xrefs":{"Monarch":{"xref_id":"0005122"}}}


id: PBO:0061140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 nucleoside diphosphate kinase 3","termid":"PBO:0061140"}


id: FYPO:0006138
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of cis-aconitate measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular cis-aconitate level","synonyms":[{"name":"increased cellular cis-aconitate level during mitotic cell cycle","type":"related"},{"name":"increased cellular cis-aconitate level during vegetative growth","type":"exact"},{"name":"increased cellular cis-aconitate(3-) anion level","type":"exact"},{"name":"increased cis-aconitate accumulation","type":"related"}],"termid":"FYPO:0006138"}


id: SO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoding an mRNA that has the stop codon redefined as pyrrolysine.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_redefined_as_pyrrolysine","termid":"SO:0000884"},{"relation_name":"is_a","term_name":"gene_with_stop_codon_read_through","termid":"SO:0000697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_redefined_as_pyrrolysine","synonyms":[{"name":"gene with stop codon redefined as pyrrolysine","type":"exact"}],"termid":"SO:0000698"}


id: GO:0035478
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a chylomicron, a large lipoprotein particle (diameter 75-1200 nm) composed of a central core of triglycerides and cholesterol surrounded by a protein-phospholipid coating. The proteins include one molecule of apolipoprotein B-48 and may include a variety of apolipoproteins, including APOAs, APOCs and APOE.","definition_xrefs":["GOC:BHF","PMID:17403372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipoprotein particle binding","termid":"GO:0071813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chylomicron binding","termid":"GO:0035478"}


id: PBO:0078921
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon TTG) 10-1","termid":"PBO:0078921"}


id: PBO:0069628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 905, pseudogene","termid":"PBO:0069628"}


id: PBO:0121131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WDR12 pseudogene 1","termid":"PBO:0121131"}


id: PBO:0071603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36a pseudogene 20","termid":"PBO:0071603"}


id: GO:0019769
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgE receptor activity","termid":"GO:0019767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"low-affinity IgE receptor activity","synonyms":[{"name":"low affinity Fc receptor activity","type":"related"},{"name":"low affinity IgE receptor activity","type":"exact"}],"termid":"GO:0019769"}


id: FYPO:0004466
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the number of sites at which the protein Rad52 (also called Rad22) accumulates is greater than normal during a cellular response to camptothecin.","definition_xrefs":["PomBase:mah","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased number of Rad52 foci during vegetative growth","termid":"FYPO:0000972"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased number of Rad52 foci during cellular response to camptothecin","synonyms":[{"name":"increased number of Rad22 foci during cellular response to camptothecin","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to CPT","type":"exact"},{"name":"increased number of Rad52 foci during cellular response to camptothecin during mitotic cell cycle","type":"related"},{"name":"increased number of Rad52 foci during cellular response to camptothecin during vegetative growth","type":"exact"}],"termid":"FYPO:0004466"}


id: GO:1903838
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of mRNA 3'-UTR binding.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000059","PMID:19575011"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mRNA 3'-UTR binding (obsolete GO:1903838)","synonyms":[{"name":"down regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3' UTR binding","type":"exact"},{"name":"down-regulation of mRNA 3'-UTR binding","type":"exact"},{"name":"downregulation of mRNA 3' UTR binding","type":"exact"},{"name":"downregulation of mRNA 3'-UTR binding","type":"exact"},{"name":"inhibition of mRNA 3' UTR binding","type":"narrow"},{"name":"inhibition of mRNA 3'-UTR binding","type":"narrow"},{"name":"negative regulation of mRNA 3' UTR binding","type":"exact"}],"termid":"GO:1903838"}


id: SO:0001305
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"N6_threonylcarbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6_threonylcarbamoyladenosine","secondary_identifiers":["RNAMOD:011"],"synonyms":[{"name":"N6 threonylcarbamoyladenosine","type":"exact"},{"name":"N6-threonylcarbamoyladenosine","type":"exact"},{"name":"t6A","type":"exact"}],"termid":"SO:0001305"}


id: PBO:0058516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5704","termid":"PBO:0058516"}


id: PBO:0080634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 82 pseudogene 2","termid":"PBO:0080634"}


id: GO:0071853
data:
  {"annotated_genes":["SJAG_03646","SJAG_01888","SJAG_00667","SJAG_01171","SJAG_03444","SJAG_05001","SJAG_01017","SJAG_02718"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102172,110106,96031,103964,91103,113371,103965,90285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904541"}]},"cv_name":"biological_process","definition":"A cellular process that results in the breakdown of a fungal-type cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal-type cell wall organization","termid":"GO:0031505"},{"relation_name":"is_a","term_name":"cell wall disassembly","termid":"GO:0044277"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00667":null,"SJAG_01017":null,"SJAG_01171":null,"SJAG_01888":null,"SJAG_02718":null,"SJAG_03444":null,"SJAG_03646":null,"SJAG_05001":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0071554"],"is_obsolete":false,"name":"fungal-type cell wall disassembly","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0071853","terms_by_termid":{"GO:1904541":null}}


id: GO:0140785
data:
  {"annotated_genes":["SJAG_03405"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[114919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of an amino acid.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140299","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"amino acid sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"amino acid sensing activity","type":"exact"}],"termid":"GO:0140785","terms_by_termid":{"GO:0140786":null}}


id: PBO:0085528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S27, no bacterial homolog; RPS27B has a paralog, RPS27A, that arose from the whole genome duplication","termid":"PBO:0085528"}


id: PBO:0027870
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_and_delayed_cell_cycle_arrest_in_mitotic_G1_phase_in_response_to_nitrogen_starvation","termid":"PBO:0027870"}


id: GO:0045292
data:
  {"annotated_genes":["SJAG_00083","SJAG_02279","SJAG_02078","SJAG_16453","SJAG_00531","SJAG_01819","SJAG_01440","SJAG_02018","SJAG_03070","SJAG_01810","SJAG_02843","SJAG_03238","SJAG_00539","SJAG_03687","SJAG_04318","SJAG_02295","SJAG_04497","SJAG_01958","SJAG_00147","SJAG_03469","SJAG_01327","SJAG_03894","SJAG_05025","SJAG_01301","SJAG_04783","SJAG_05240","SJAG_03369","SJAG_03210","SJAG_01040","SJAG_03498","SJAG_00094","SJAG_02862","SJAG_01511","SJAG_04433","SJAG_02185","SJAG_00322","SJAG_00498","SJAG_00998","SJAG_01144","SJAG_02455","SJAG_04898","SJAG_03711","SJAG_03983","SJAG_01433","SJAG_04694","SJAG_02304","SJAG_03291","SJAG_01852","SJAG_03993","SJAG_05212","SJAG_01870","SJAG_01152","SJAG_01064","SJAG_01452","SJAG_02686","SJAG_04025","SJAG_00058","SJAG_01200","SJAG_04214","SJAG_01408","SJAG_04293","SJAG_03112","SJAG_01629","SJAG_02688","SJAG_02396","SJAG_03937","SJAG_00597","SJAG_00504","SJAG_00446","SJAG_00313","SJAG_03547","SJAG_04914","SJAG_03430","SJAG_01008","SJAG_03849","SJAG_04071","SJAG_01308","SJAG_03966","SJAG_01547","SJAG_02687","SJAG_00571","SJAG_04911","SJAG_01015","SJAG_04222","SJAG_01557","SJAG_00989","SJAG_00414","SJAG_04529","SJAG_04117","SJAG_01504","SJAG_04949","SJAG_00577","SJAG_00225","SJAG_05349","SJAG_03279","SJAG_01654","SJAG_04589","SJAG_00818","SJAG_04405","SJAG_05211","SJAG_00859","SJAG_00363","SJAG_00911","SJAG_03460","SJAG_03301","SJAG_00076","SJAG_00643","SJAG_03995","SJAG_02879","SJAG_04079","SJAG_01634","SJAG_02317","SJAG_02558","SJAG_02469","SJAG_03954","SJAG_01214","SJAG_02722","SJAG_00809","SJAG_05235","SJAG_02905","SJAG_00639","SJAG_03245","SJAG_00888","SJAG_03410","SJAG_04230","SJAG_05009","SJAG_03427","SJAG_04163","SJAG_00249","SJAG_03890","SJAG_02772","SJAG_03601","SJAG_05208","SJAG_02227","SJAG_05926","SJAG_02844","SJAG_05224","SJAG_02083"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60562,77005,78804,80326,81304,89432,90530,90998,93431,93814,94115,94677,94698,94900,95125,95593,96744,97351,97808,97964,97992,98228,98460,98850,99408,99687,102653,104428,104490,104722,105041,105224,106537,106698,106983,108797,109679,109923,110911,111832,112564,113339,114713,115225,115518,115902,116418,116424,116920,118940,119092,119288,120040,120632,120978,57444,58063,58703,59765,59844,63189,65333,65726,65759,65909,66668,68190,69015,69167,69670,72366,72394,72732,73110,73585,73753,73763,74007,74023,74744,74834,75180,75426,76031,76060,76094,76145,76250,76494,76586,76591,77048,77431,77461,77480,77655,77698,77905,77934,78033,78360,78582,79034,79315,79321,79521,79605,79776,79914,80263,80839,81284,81299,81767,81925,82260,94162,97203],"is_not":false,"summary":null,"term":"GO:0045292"},{"annotations":[119893],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000354"},{"annotations":[81343,99845,107905,112680,104726,115333,97197,114424,104564,96942,97617,112694,117306,112115,93578,96012],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000395"},{"annotations":[91485,120495],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905746"},{"annotations":[100580],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905744"}]},"cv_name":"biological_process","definition":"The joining together, after removal of an intervening sequence composed of one or more introns, of two segments of the same RNA molecule via spliceosomal catalysis to produce an mRNA composed only of exon sequences that all came from the same primary transcript.","definition_xrefs":["PMID:18458335","GOC:krc","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":138,"genes_by_uniquename":{"SJAG_00058":null,"SJAG_00076":null,"SJAG_00083":null,"SJAG_00094":null,"SJAG_00147":null,"SJAG_00225":null,"SJAG_00249":null,"SJAG_00313":null,"SJAG_00322":null,"SJAG_00363":null,"SJAG_00414":null,"SJAG_00446":null,"SJAG_00498":null,"SJAG_00504":null,"SJAG_00531":null,"SJAG_00539":null,"SJAG_00571":null,"SJAG_00577":null,"SJAG_00597":null,"SJAG_00639":null,"SJAG_00643":null,"SJAG_00809":null,"SJAG_00818":null,"SJAG_00859":null,"SJAG_00888":null,"SJAG_00911":null,"SJAG_00989":null,"SJAG_00998":null,"SJAG_01008":null,"SJAG_01015":null,"SJAG_01040":null,"SJAG_01064":null,"SJAG_01144":null,"SJAG_01152":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_01301":null,"SJAG_01308":null,"SJAG_01327":null,"SJAG_01408":null,"SJAG_01433":null,"SJAG_01440":null,"SJAG_01452":null,"SJAG_01504":null,"SJAG_01511":null,"SJAG_01547":null,"SJAG_01557":null,"SJAG_01629":null,"SJAG_01634":null,"SJAG_01654":null,"SJAG_01810":null,"SJAG_01819":null,"SJAG_01852":null,"SJAG_01870":null,"SJAG_01958":null,"SJAG_02018":null,"SJAG_02078":null,"SJAG_02083":null,"SJAG_02185":null,"SJAG_02227":null,"SJAG_02279":null,"SJAG_02295":null,"SJAG_02304":null,"SJAG_02317":null,"SJAG_02396":null,"SJAG_02455":null,"SJAG_02469":null,"SJAG_02558":null,"SJAG_02686":null,"SJAG_02687":null,"SJAG_02688":null,"SJAG_02722":null,"SJAG_02772":null,"SJAG_02843":null,"SJAG_02844":null,"SJAG_02862":null,"SJAG_02879":null,"SJAG_02905":null,"SJAG_03070":null,"SJAG_03112":null,"SJAG_03210":null,"SJAG_03238":null,"SJAG_03245":null,"SJAG_03279":null,"SJAG_03291":null,"SJAG_03301":null,"SJAG_03369":null,"SJAG_03410":null,"SJAG_03427":null,"SJAG_03430":null,"SJAG_03460":null,"SJAG_03469":null,"SJAG_03498":null,"SJAG_03547":null,"SJAG_03601":null,"SJAG_03687":null,"SJAG_03711":null,"SJAG_03849":null,"SJAG_03890":null,"SJAG_03894":null,"SJAG_03937":null,"SJAG_03954":null,"SJAG_03966":null,"SJAG_03983":null,"SJAG_03993":null,"SJAG_03995":null,"SJAG_04025":null,"SJAG_04071":null,"SJAG_04079":null,"SJAG_04117":null,"SJAG_04163":null,"SJAG_04214":null,"SJAG_04222":null,"SJAG_04230":null,"SJAG_04293":null,"SJAG_04318":null,"SJAG_04405":null,"SJAG_04433":null,"SJAG_04497":null,"SJAG_04529":null,"SJAG_04589":null,"SJAG_04694":null,"SJAG_04783":null,"SJAG_04898":null,"SJAG_04911":null,"SJAG_04914":null,"SJAG_04949":null,"SJAG_05009":null,"SJAG_05025":null,"SJAG_05208":null,"SJAG_05211":null,"SJAG_05212":null,"SJAG_05224":null,"SJAG_05235":null,"SJAG_05240":null,"SJAG_05349":null,"SJAG_05926":null,"SJAG_16453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"mRNA cis splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"nuclear mRNA cis splicing, via U2-type spliceosome","type":"narrow"},{"name":"nuclear mRNA cis splicing, via spliceosome","type":"exact"},{"name":"splicing","type":"broad"}],"termid":"GO:0045292","terms_by_termid":{"GO:0000354":null,"GO:0000395":null,"GO:0045292":null,"GO:1905744":null,"GO:1905746":null}}


id: MONDO:0005103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A locally aggressive malignant neoplasm composed of mature adipocytes showing cell size variation and nuclear atypia. It is often associated with the presence of hyperchromatic multinucleated stromal cells, and varying numbers of lipoblasts. There are three histologic subtypes, sclerosing, inflammatory, and spindle cell liposarcoma. These tumors do not usually metastasize unless they undergo dedifferentiation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"liposarcoma","termid":"MONDO:0005060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"well-differentiated liposarcoma","secondary_identifiers":["EFO:0000736","ONCOTREE:WDLS","ICDO:8851/3","Orphanet:99971","NCIT:C4250","MEDGEN:237164","GARD:19721","UMLS:C1370889"],"synonyms":[{"name":"ALT","type":"exact"},{"name":"WDLS","type":"exact"},{"name":"atypical lipoma","type":"exact"},{"name":"atypical lipomatous tumor","type":"broad"},{"name":"atypical lipomatous tumour","type":"broad"},{"name":"well differentiated liposarcoma","type":"exact"},{"name":"well differentiated liposarcoma of deep soft tissue","type":"exact"},{"name":"well-differentiated liposarcoma","type":"exact"}],"termid":"MONDO:0005103","xrefs":{"Monarch":{"xref_id":"0005103"}}}


id: PBO:0051637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP U3 small nucleolar ribonucleoprotein 3","termid":"PBO:0051637"}


id: PBO:0004903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial m-AAA protease Yta12 (predicted)","termid":"PBO:0004903"}


