# terms

id: FYPO:0006413
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more histone RNAs measured in a cell is higher than normal (i.e. lower than observed in wild-type cells). Histone RNAs are transcribed from genes encoding histones.","definition_xrefs":["PomBase:mah","PMID:17452352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased level of histone gene mRNA during vegetative growth","synonyms":[{"name":"increased histone gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of histone gene RNA during vegetative growth","type":"exact"},{"name":"increased level of histone gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of histone gene transcripts during vegetative growth","type":"exact"}],"termid":"FYPO:0006413"}


id: PBO:0088047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme variant; involved in error-free postreplication repair; forms a heteromeric complex with Ubc13p, an active ubiquitin-conjugating enzyme; cooperates with chromatin-associated RING finger proteins, Rad18p and Rad5p; protein abundance increases in response to DNA replication stress","termid":"PBO:0088047"}


id: PR:000027576
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.1, initiator methionine removed phosphorylated form that has been phosphorylated by Haspin in Schizosaccharomyces pombe. Example: UniProtKB:P09988-1, 2-136, Thr-4, MOD:00047.","definition_xrefs":["PMID:20929775","PomBase:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.1, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027574"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht1/Phos(T3)","pombase_gene_id":"SPAC1834.04","synonyms":[{"name":"H3-pT3","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.1, initiator methionine removed phosphorylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht1/InitMet-/Phos:1","type":"exact"},{"name":"hht1/InitMet-/Phos:(T4)","type":"exact"},{"name":"hht1/Phos(T3)","type":"exact"}],"termid":"PR:000027576"}


id: PBO:0086565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YMR320W is not an essential gene","termid":"PBO:0086565"}


id: PBO:0072130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 7","termid":"PBO:0072130"}


id: MONDO:1060107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of oxysterol accumulation caused by biallelic loss of function variants in the CYP7B1 gene. A disorder of oxysterol accumulation is a condition where there is an abnormal buildup of oxysterols, which are oxidized cholesterol derivatives, in the body.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited lipid metabolism disorder","termid":"MONDO:0002525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"CYP7B1-related disorder of oxysterol accumulation","synonyms":[{"name":"CYP7B1-related disorder of oxysterol accumulation","type":"exact"}],"termid":"MONDO:1060107","xrefs":{"Monarch":{"xref_id":"1060107"}}}


id: PBO:0072385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 11","termid":"PBO:0072385"}


id: MONDO:0008475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which there is forward displacement of a vertebral bone over the on below it.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disease of bone structure","termid":"MONDO:0000836"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spondylolisthesis","secondary_identifiers":["OMIM:184200","MEDGEN:52470","SCTID:274152003","NCIT:C35033","MESH:D013168","HP:0003302","ICD10CM:M43.1","EFO:0007493","UMLS:C0038016","icd11.foundation:1075039772","DOID:6682"],"synonyms":[{"name":"spondylolisthesis","type":"exact"},{"name":"spondylolisthesis (disease)","type":"exact"}],"termid":"MONDO:0008475","xrefs":{"Monarch":{"xref_id":"0008475"}}}


id: PBO:0055455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2887","termid":"PBO:0055455"}


id: GO:0150180
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylserine metabolic process.","definition_xrefs":["PMID:30074985","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylserine metabolic process","termid":"GO:0150178"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phosphatidylserine metabolic process","termid":"GO:0006658"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylserine metabolic process","termid":"GO:0150180"}


id: GO:0043038
data:
  {"annotated_genes":["SJAG_04094","SJAG_02977"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120127],"is_not":false,"summary":null,"term":"GO:0043038"},{"annotations":[96677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070127"}]},"cv_name":"biological_process","definition":"The modification of an amino acid to an active form, for incorporation into a peptide, protein or other macromolecule.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02977":null,"SJAG_04094":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"amino acid activation","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0043038","terms_by_termid":{"GO:0043038":null,"GO:0070127":null}}


id: FYPO:0003806
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing one or more non-fermentable substance(s) as the only carbon source(s).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"},{"relation_name":"is_a","term_name":"decreased cell population growth on non-fermentable carbon source","termid":"FYPO:0003805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000003","FYPO:0001985","FYPO:0002057","FYPO:0002060","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"abolished cell population growth on non-fermentable carbon source","synonyms":[{"name":"abolished growth on non-fermentable carbon source","type":"broad"},{"name":"abolished non-fermentable carbon source utilization","type":"related"},{"name":"abolished vegetative cell population growth on non-fermentable carbon source","type":"exact"},{"name":"cell population growth on non-fermentable carbon source abolished","type":"exact"}],"termid":"FYPO:0003806"}


id: GO:0036276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an antidepressant stimulus, a mood-stimulating drug.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to antidepressant","termid":"GO:0036276"}


id: FYPO:0008219
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which acetylation of lysine at position 56 of histone H3 in regions of the genome that are actively transcribed occurs to a greater extent than normal.","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K56 acetylation in transcribed regions during vegetative growth","termid":"FYPO:0002370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0001320","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H3-K56 acetylation in transcribed regions during mitotic G2/M phase","termid":"FYPO:0008219"}


id: MONDO:0014277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"developmental dysplasia of the hip","termid":"MONDO:0000158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"developmental dysplasia of the hip 2","secondary_identifiers":["MEDGEN:811575","OMIM:615612","UMLS:C3715079","DOID:0060932"],"synonyms":[{"name":"DDH2","type":"exact"},{"name":"developmental dysplasia of the hip 2","type":"exact"}],"termid":"MONDO:0014277","xrefs":{"Monarch":{"xref_id":"0014277"}}}


id: GO:0047300
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: pyridoxamine + pyruvate = L-alanine + pyridoxal.","definition_xrefs":["EC:2.6.1.30","RHEA:12841"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016769","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"pyridoxamine-pyruvate transaminase activity","secondary_identifiers":["MetaCyc:2.6.1.30-RXN","KEGG_REACTION:R01712"],"synonyms":[{"name":"pyridoxamine--pyruvate aminotransferase activity","type":"related"},{"name":"pyridoxamine-pyruvate aminotransferase activity","type":"exact"},{"name":"pyridoxamine-pyruvic transaminase","type":"broad"},{"name":"pyridoxamine:pyruvate aminotransferase activity","type":"related"},{"name":"pyridoxamineu-pyruvic transaminase activity","type":"related"}],"termid":"GO:0047300"}


id: PBO:0066185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 8A","termid":"PBO:0066185"}


id: PBO:0027720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_acetylation","termid":"PBO:0027720"}


id: PR:000050584
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase spk1 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-199 and Tyr-201 of the amino acid sequence represented by UniProtKB:P27638. Example:UniProtKB:P27638, Thr-199, MOD:00047|Tyr-201, MOD:00048.","definition_xrefs":["PMID:33823663","PRO:DAN","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spk1/Phos:(T199)","pombase_gene_id":"SPAC31G5.09c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitogen-activated protein kinase spk1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-spk1/Phos:1","type":"exact"},{"name":"UniProtKB:P27638, Thr-199, MOD:00047|Tyr-201, MOD:00048","type":"narrow"},{"name":"spk1/Phos:(T199)","type":"exact"}],"termid":"PR:000050584"}


id: GO:0007449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the proximal/distal axis of the imaginal disc. Imaginal disks are masses of hypodermic cells, carried by the larvae of some insects after leaving the egg, from which masses the wings and legs of the adult are subsequently formed.","definition_xrefs":["ISBN:0879694238","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc pattern formation","termid":"GO:0007447"},{"relation_name":"is_a","term_name":"proximal/distal pattern formation","termid":"GO:0009954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"proximal/distal pattern formation, imaginal disc","termid":"GO:0007449"}


id: GO:0102312
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaryl-CoA + 2-oxoglutarate + O2 = 2,4-dihydroxycinnamoyl-CoA + succinate + carbon dioxide.","definition_xrefs":["PMID:22168819","GOC:pz","PMID:22169019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"4-coumaroyl 2'-hydroxylase activity","secondary_identifiers":["EC:1.14.11.62","RHEA:57868","MetaCyc:RXN-12963"],"termid":"GO:0102312"}


id: MONDO:1030000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hyperinsulinemic hypoglycemia which is accompanied by cystic structures in the kidneys, and in which the cause of the disease is a variation in the PMM2 promoter.","definition_xrefs":["PMID:36412659","PMID:28373276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperinsulinemic hypoglycemia","termid":"MONDO:0005803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0037792"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"hyperinsulinemic hypoglycemia with polycystic kidney disease","synonyms":[{"name":"HIPKD","type":"exact"}],"termid":"MONDO:1030000","xrefs":{"Monarch":{"xref_id":"1030000"}}}


id: PBO:0066737
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 34","termid":"PBO:0066737"}


id: PBO:0060189
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucin 7, secreted","termid":"PBO:0060189"}


id: MONDO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A systemic mycosis that arises from infection in an immunologically normal host.","direct_ancestors":[{"relation_name":"is_a","term_name":"systemic mycosis","termid":"MONDO:0000256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary systemic mycosis","secondary_identifiers":["DOID:0050292"],"termid":"MONDO:0000308","xrefs":{"Monarch":{"xref_id":"0000308"}}}


id: GO:0052003
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a virus interferes with, inhibits or disrupts a host salicylic acid-mediated signal transduction pathways during the host defense response. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host salicylic acid-mediated signal transduction pathway","termid":"GO:0052081"},{"relation_name":"negatively_regulates","term_name":"systemic acquired resistance","termid":"GO:0009627"},{"relation_name":"negatively_regulates","term_name":"systemic acquired resistance, salicylic acid mediated signaling pathway","termid":"GO:0009862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of defense-related host salicylic acid-mediated signal transduction pathway","secondary_identifiers":["GO:0052252","GO:0052253","GO:0052004"],"synonyms":[{"name":"disruption of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"down regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"down regulation by symbiont of host salicylic acid-mediated defense response","type":"exact"},{"name":"down-regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"down-regulation by symbiont of host salicylic acid-mediated defense response","type":"exact"},{"name":"downregulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"downregulation by symbiont of host salicylic acid-mediated defense response","type":"exact"},{"name":"inhibition by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"narrow"},{"name":"inhibition by symbiont of host salicylic acid-mediated defense response","type":"narrow"},{"name":"negative modulation by organism of defense-related host SA-mediated signal transduction pathway","type":"exact"},{"name":"negative modulation by organism of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related host SA-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by organism of defense-related salicylic acid-mediated signal transduction pathway of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by organism of salicylic acid-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"negative regulation by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"negative regulation by symbiont of host salicylic acid-mediated defense response","type":"exact"},{"name":"negative regulation of host SA-mediated defense response","type":"exact"},{"name":"suppression by organism of host salicylic acid-mediated defense response","type":"exact"},{"name":"suppression by symbiont of defense-related host salicylic acid-mediated signal transduction pathway","type":"exact"},{"name":"suppression of host SA mediated defense response","type":"exact"}],"termid":"GO:0052003"}


id: PBO:0045521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dystrobrevin beta","termid":"PBO:0045521"}


id: PBO:0076687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription elongation factor A like 4 pseudogene 1","termid":"PBO:0076687"}


id: PR:O74484
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mannose-1-phosphate guanyltransferase beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04907","PANTHER:PTHR22572:SF15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannose-1-phosphate guanyltransferase beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1906.01","secondary_identifiers":["UniProtKB:O74484"],"synonyms":[{"name":"GDP-mannose pyrophosphorylase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"GTP-mannose-1-phosphate guanylyltransferase (Schizosaccharomyces pombe 972h-)","type":"broad"},{"name":"SPCC1906.01","type":"related"},{"name":"Spom972h-GMPPB","type":"exact"}],"termid":"PR:O74484"}


id: PBO:0029046
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_sodium_import","termid":"PBO:0029046"}


id: MONDO:0021345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the pharynx.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system carcinoma","termid":"MONDO:0006181"},{"relation_name":"is_a","term_name":"pharynx neoplasm","termid":"MONDO:0021246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"carcinoma of pharynx","secondary_identifiers":["MEDGEN:757152","SCTID:449254004","UMLS:C3164746","NCIT:C9466"],"synonyms":[{"name":"cancer of the pharynx","type":"exact"},{"name":"carcinoma of pharynx","type":"exact"},{"name":"carcinoma of the pharynx","type":"exact"},{"name":"pharyngeal carcinoma","type":"exact"},{"name":"pharyngeal throat cancer","type":"exact"},{"name":"pharynx carcinoma","type":"exact"}],"termid":"MONDO:0021345","xrefs":{"Monarch":{"xref_id":"0021345"}}}


id: MONDO:0859296
data:
  {"annotated_genes":["SJAG_00712"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87747],"is_not":false,"summary":null,"term":"MONDO:0859296"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with poor growth, spastic tetraplegia, and hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081324","OMIM:620071","UMLS:C5774229","MEDGEN:1824002"],"termid":"MONDO:0859296","terms_by_termid":{"MONDO:0859296":null},"xrefs":{"Monarch":{"xref_id":"0859296"}}}


id: GO:0006028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of galactosaminoglycans, any of a group of polysaccharides that contain amino sugars derived from the galactose.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete galactosaminoglycan catabolic process (obsolete GO:0006028)","synonyms":[{"name":"galactosaminoglycan breakdown","type":"exact"},{"name":"galactosaminoglycan catabolism","type":"exact"},{"name":"galactosaminoglycan degradation","type":"exact"}],"termid":"GO:0006028"}


id: PBO:0058747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6871","termid":"PBO:0058747"}


id: MONDO:0012771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inherited susceptibility to asthma in which the cause of the disease is a mutation in the CHI3L1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited susceptibility to asthma","termid":"MONDO:0010940"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asthma-related traits, susceptibility to, 7","secondary_identifiers":["MEDGEN:394362","UMLS:C2677770","OMIM:611960"],"synonyms":[{"name":"ASRT7","type":"related"},{"name":"CHI3L1 inherited susceptibility to asthma","type":"exact"},{"name":"asthma-RELATED traits, susceptibility to, 7","type":"related"},{"name":"asthma-related traits, susceptibility to, 7","type":"exact"},{"name":"asthma-related traits, susceptibility to, type 7","type":"exact"},{"name":"inherited susceptibility to asthma caused by mutation in CHI3L1","type":"exact"}],"termid":"MONDO:0012771","xrefs":{"Monarch":{"xref_id":"0012771"}}}


id: PBO:0056546
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple coagulation factor deficiency 2 pseudogene 1","termid":"PBO:0056546"}


id: GO:0071813
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipoprotein particle. A lipoprotein particle, also known as a lipoprotein, is a clathrate complex consisting of a lipid enwrapped in a protein host without covalent binding in such a way that the complex has a hydrophilic outer surface consisting of all the protein and the polar ends of any phospholipids.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-lipid complex binding","termid":"GO:0071814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"lipoprotein particle binding","synonyms":[{"name":"lipoprotein binding","type":"related"},{"name":"plasma lipoprotein binding","type":"related"},{"name":"plasma lipoprotein particle binding","type":"exact"}],"termid":"GO:0071813"}


id: FYPO:0003519
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of hercynylcysteine sulfoxide measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during vegetative growth","termid":"FYPO:0001330"},{"relation_name":"is_a","term_name":"increased cellular hercynylcysteine sulfoxide level","termid":"FYPO:0003522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"increased cellular hercynylcysteine sulfoxide level during vegetative growth","synonyms":[{"name":"increased cellular hercynylcysteine sulfoxide level during mitotic cell cycle","type":"related"},{"name":"increased cellular hercynylcysteine sulphoxide level during vegetative growth","type":"exact"},{"name":"increased hercynylcysteine sulfoxide level during vegetative growth","type":"exact"}],"termid":"FYPO:0003519"}


id: PBO:0066290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member Q, pseudogene","termid":"PBO:0066290"}


id: PBO:0046034
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 2 subunit 2 beta pseudogene 2","termid":"PBO:0046034"}


id: PBO:0059581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated 1 family member 3","termid":"PBO:0059581"}


id: GO:2000872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of progesterone secretion.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of female gonad development","termid":"GO:2000196"},{"relation_name":"is_a","term_name":"positive regulation of steroid hormone secretion","termid":"GO:2000833"},{"relation_name":"is_a","term_name":"regulation of progesterone secretion","termid":"GO:2000870"},{"relation_name":"positively_regulates","term_name":"progesterone secretion","termid":"GO:0042701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of progesterone secretion","termid":"GO:2000872"}


id: PBO:0065544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin D2 receptor","termid":"PBO:0065544"}


id: MONDO:0007866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse palmoplantar keratoderma","termid":"MONDO:0017666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Bart-Pumphrey syndrome","secondary_identifiers":["DOID:0050658","Orphanet:2698","UMLS:C0266004","GARD:3125","ICD9:759.89","MESH:C537210","SCTID:1271009","OMIM:149200","MEDGEN:82727"],"synonyms":[{"name":"Bart-Pumphrey syndrome","type":"exact"},{"name":"knuckle pads, leuconychia and sensorineural deafness","type":"related"},{"name":"knuckle pads, leukonychia, and sensorineural deafness","type":"exact"},{"name":"knuckle pads-leukonychia-sensorineural deafness-palmoplantar hyperkeratosis syndrome","type":"related"},{"name":"knuckle pads-leukonychia-sensorineural deafness-palmoplantar keratoderma syndrome","type":"exact"}],"termid":"MONDO:0007866","xrefs":{"Monarch":{"xref_id":"0007866"}}}


id: GO:0009567
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Fertilization where one of the two sperm nuclei from the pollen tube fuses with the egg nucleus to form a 2n zygote, and the other fuses with the two polar nuclei to form the 3n primary endosperm nucleus and then develops into the endosperm. The ploidy level of the 2n zygote and 3n primary endosperm nucleus is determined by the ploidy level of the parents involved. An example of this component is found in Arabidopsis thaliana.","definition_xrefs":["GOC:tb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double fertilization forming a zygote and endosperm","synonyms":[{"name":"double fertilization","type":"exact"}],"termid":"GO:0009567"}


id: GO:0018249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of a water group from a protein amino acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein dehydration","synonyms":[{"name":"protein amino acid dehydration","type":"exact"}],"termid":"GO:0018249"}


id: GO:0019707
data:
  {"annotated_genes":["SJAG_04451","SJAG_01299","SJAG_00895","SJAG_01112"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76987,73005,74887,69752],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019706"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an acyl group to a sulfur atom on the cysteine of a protein molecule.","definition_xrefs":["GOC:ai","RHEA:63372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-acyltransferase activity","termid":"GO:0016417"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00895":null,"SJAG_01112":null,"SJAG_01299":null,"SJAG_04451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016746","GO:0140096"],"is_obsolete":false,"name":"protein-cysteine S-acyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null},"termid":"GO:0019707","terms_by_termid":{"GO:0019706":null}}


id: SO:2000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The sequence referred to by an entry in a databank such as GenBank or SwissProt.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent","termid":"SO:0000695"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"databank_entry","synonyms":[{"name":"accession","type":"related"},{"name":"databank entry","type":"exact"}],"termid":"SO:2000061"}


id: FYPO:0004242
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a protein kinase activity is decreased during the S phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein kinase activity during mitotic interphase","termid":"FYPO:0003331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased protein kinase activity during mitotic S phase","synonyms":[{"name":"reduced protein kinase activity during mitotic S phase","type":"exact"}],"termid":"FYPO:0004242"}


id: FYPO:0006049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a mitotic spindle assembles, but then undergoes large changes in length, instead of remaining at a constant length or gradually elongating.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"unstable mitotic spindle","termid":"FYPO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000337","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"fluctuating mitotic spindle length","synonyms":[{"name":"fluctuating mitotic spindle length during vegetative growth","type":"exact"},{"name":"fluctuating spindle length during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006049"}


id: PBO:0055383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2813","termid":"PBO:0055383"}


id: GO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an oleic acid stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to oleic acid","termid":"GO:0034201"},{"relation_name":"is_a","term_name":"cellular response to fatty acid","termid":"GO:0071398"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to oleic acid","synonyms":[{"name":"cellular response to oleate","type":"exact"}],"termid":"GO:0071400"}


id: GO:0048559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that determines the orientation of the floral organs with reference to the central axis of the flower.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"establishment of plant organ orientation","termid":"GO:0090707"},{"relation_name":"part_of","term_name":"flower morphogenesis","termid":"GO:0048439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of floral organ orientation","termid":"GO:0048559"}


id: PBO:0026694
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_caesium","termid":"PBO:0026694"}


id: GO:0036421
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of mycolate membrane consisting of gene products and protein complexes that are loosely bound to its external surface, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:md"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of external side of cell outer membrane","termid":"GO:0031242"},{"relation_name":"is_a","term_name":"extrinsic component of mycolate outer membrane","termid":"GO:0036420"},{"relation_name":"part_of","term_name":"external side of mycolate outer membrane","termid":"GO:0098568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"extrinsic component of external side of mycolate outer membrane","synonyms":[{"name":"extrinsic to external side of MOM","type":"exact"},{"name":"extrinsic to external side of mycolate outer membrane","type":"narrow"},{"name":"extrinsic to external side of mycomembrane","type":"exact"}],"termid":"GO:0036421"}


id: PBO:0080535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASHC5 antisense RNA 1","termid":"PBO:0080535"}


id: MONDO:0032804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 15, hypohidrotic/hair type","secondary_identifiers":["OMIM:618535","UMLS:C5193145","DOID:0111651","GARD:16361","MEDGEN:1680605"],"synonyms":[{"name":"ECTD15","type":"related"},{"name":"ECTODERMAL DYSPLASIA 15, HYPOHIDROTIC/HAIR TYPE","type":"related"}],"termid":"MONDO:0032804","xrefs":{"Monarch":{"xref_id":"0032804"}}}


id: PBO:0055829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeats and calponin homology domain containing 4","termid":"PBO:0055829"}


id: GO:0018824
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (hydroxyamino)benzene = 2-aminophenol.","definition_xrefs":["EC:5.4.4.1","UM-BBD_reactionID:r0304"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular hydroxytransferase activity","termid":"GO:0050486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(hydroxyamino)benzene mutase activity","secondary_identifiers":["RHEA:19245","MetaCyc:5.4.4.1-RXN"],"synonyms":[{"name":"(hydroxyamino)benzene hydroxymutase activity","type":"related"},{"name":"HAB mutase activity","type":"related"},{"name":"hydroxylaminobenzene hydroxymutase activity","type":"related"},{"name":"hydroxylaminobenzene mutase activity","type":"related"}],"termid":"GO:0018824"}


id: MONDO:0005936
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with nontuberculous mycobacteria (atypical mycobacteria): M. kansasii, M. marinum, M. scrofulaceum, M. flavescens, M. gordonae, M. obuense, M. gilvum, M. duvali, M. szulgai, M. intracellulare (see mycobacterium avium complex;), M. xenopi (littorale), M. ulcerans, M. buruli, M. terrae, M. fortuitum (minetti, giae), M. chelonae.","definition_xrefs":["MESH:D009165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recurrent pneumonia","secondary_identifiers":["HP:0006532","MEDGEN:195802","SCTID:699014000","UMLS:C0694550","EFO:0007461"],"synonyms":[{"name":"recurrent pneumonia","type":"exact"},{"name":"recurrent pneumonia (disease)","type":"exact"}],"termid":"MONDO:0005936","xrefs":{"Monarch":{"xref_id":"0005936"}}}


id: PBO:0057640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1231","termid":"PBO:0057640"}


id: PBO:0084938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mucin family member involved in various signaling pathways; functions as osmosensor in the Sho1p-mediated HOG pathway; functions in Cdc42p- and MAP kinase-dependent filamentous growth signaling pathway; processed into secreted and cell-associated forms by aspartyl protease Yps1p; potential Cdc28p substrate","termid":"PBO:0084938"}


id: FYPO:0005897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is increased during G1 phase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to chromatin during vegetative growth","termid":"FYPO:0003011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"increased protein localization to chromatin during mitotic G1 phase","synonyms":[{"name":"increased protein localisation to chromatin during mitotic G1 phase","type":"exact"},{"name":"increased protein localization to chromatin during G1 phase during vegetative growth","type":"exact"},{"name":"increased protein localization to chromatin during G1 phase of mitotic cell cycle","type":"related"}],"termid":"FYPO:0005897"}


id: PBO:0057254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 455","termid":"PBO:0057254"}


id: PATO:0001476
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased position","synonyms":[{"name":"low position","type":"related"}],"termid":"PATO:0001476"}


id: GO:0006642
data:
  {"annotated_genes":["SJAG_02089","SJAG_02907","SJAG_02487","SJAG_02683"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92122,93909,95678,116848],"is_not":false,"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The release of triglycerides, any triester of glycerol, from storage within cells or tissues, making them available for metabolism.","definition_xrefs":["GOC:mah","PMID:11943743","PMID:15713625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride metabolic process","termid":"GO:0006641"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02089":null,"SJAG_02487":null,"SJAG_02683":null,"SJAG_02907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"triglyceride mobilization","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"triacylglycerol mobilization","type":"exact"}],"termid":"GO:0006642","terms_by_termid":{"GO:0006642":null}}


id: PBO:0057216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR378D2 host gene","termid":"PBO:0057216"}


id: GO:1900978
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of phosphorus metabolic process","termid":"GO:0010563"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"negatively_regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of tatiopterin metabolic process","synonyms":[{"name":"down regulation of tatiopterin metabolic process","type":"exact"},{"name":"down regulation of tatiopterin metabolism","type":"exact"},{"name":"down-regulation of tatiopterin metabolic process","type":"exact"},{"name":"down-regulation of tatiopterin metabolism","type":"exact"},{"name":"downregulation of tatiopterin metabolic process","type":"exact"},{"name":"downregulation of tatiopterin metabolism","type":"exact"},{"name":"inhibition of tatiopterin metabolic process","type":"narrow"},{"name":"inhibition of tatiopterin metabolism","type":"exact"},{"name":"negative regulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900978"}


id: GO:0102630
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3',4',5,7-pentahydroxy-8-methoxyflavon-3-olate + S-adenosyl-L-methionine = gossypetin 3',8-dimethyl ether + S-adenosyl-L-homocysteine + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gossypetin 8-methyl ester 3'-O-methyltransferase activity (obsolete GO:0102630)","termid":"GO:0102630"}


id: GO:0034504
data:
  {"annotated_genes":["SJAG_03299","SJAG_04366","SJAG_02592","SJAG_03662","SJAG_00383","SJAG_00968","SJAG_01374","SJAG_00471","SJAG_01621","SJAG_04411","SJAG_03907","SJAG_01328","SJAG_02520","SJAG_03002","SJAG_01311","SJAG_02425","SJAG_03729","SJAG_01584","SJAG_02210","SJAG_01834","SJAG_00586","SJAG_00840","SJAG_03959","SJAG_02274","SJAG_03470","SJAG_01789","SJAG_01013","SJAG_01185","SJAG_03693","SJAG_03986","SJAG_03300","SJAG_02757","SJAG_00065","SJAG_01909","SJAG_01083","SJAG_04645","SJAG_02998","SJAG_03453","SJAG_01084","SJAG_01655","SJAG_00093","SJAG_01065","SJAG_01449","SJAG_03593","SJAG_03048","SJAG_00375","SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107837],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0042308"},{"annotations":[116530],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1900181"},{"annotations":[75616,76939,78897,103173,78018,75135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006607"},{"annotations":[104401,92857,96382],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0042307"},{"annotations":[96293,117863,90919,99838,75958,61101,95999,75705,73471,76414,82135,108366,67723,76176,74963,77093,79861,77624,72356,77535,78277,74563,82358,77631,82023,73259,81623,107089,72955,73529,74751,75678,74810,80433,98138,71959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006606"},{"annotations":[78895,77090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036228"}]},"cv_name":"biological_process","definition":"A process in which a protein transports or maintains the localization of another protein to the nucleus.","definition_xrefs":["GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00065":null,"SJAG_00093":null,"SJAG_00375":null,"SJAG_00383":null,"SJAG_00471":null,"SJAG_00586":null,"SJAG_00840":null,"SJAG_00968":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01084":null,"SJAG_01185":null,"SJAG_01311":null,"SJAG_01328":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01584":null,"SJAG_01621":null,"SJAG_01655":null,"SJAG_01789":null,"SJAG_01834":null,"SJAG_01909":null,"SJAG_02210":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02592":null,"SJAG_02757":null,"SJAG_02998":null,"SJAG_03002":null,"SJAG_03048":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03453":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03662":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03907":null,"SJAG_03959":null,"SJAG_03986":null,"SJAG_04148":null,"SJAG_04366":null,"SJAG_04411":null,"SJAG_04645":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to nucleus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0044744"],"synonyms":[{"name":"protein localisation to nucleus","type":"exact"},{"name":"protein localization in cell nucleus","type":"exact"},{"name":"protein localization in nucleus","type":"exact"},{"name":"protein targeting to nucleus","type":"related"}],"termid":"GO:0034504","terms_by_termid":{"GO:0006606":null,"GO:0006607":null,"GO:0036228":null,"GO:0042307":null,"GO:0042308":null,"GO:1900181":null}}


id: MONDO:0012426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any severe combined immunodeficiency in which the cause of the disease is a mutation in the CD247 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B+ severe combined immunodeficiency due to CD3delta/CD3epsilon/CD3zeta","termid":"MONDO:0015703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 25","secondary_identifiers":["MEDGEN:346666","DOID:0111942","GARD:18294","OMIM:610163","MESH:C565712","UMLS:C1857798","DOID:0060007"],"synonyms":[{"name":"CD247 severe combined immunodeficiency (disease)","type":"exact"},{"name":"CD3zeta deficiency","type":"exact"},{"name":"IMD25","type":"related"},{"name":"immunodeficiency 25","type":"exact"},{"name":"immunodeficiency due to defect in CD3-zeta","type":"related"},{"name":"immunodeficiency type 25","type":"exact"},{"name":"severe combined immunodeficiency (disease) caused by mutation in CD247","type":"exact"}],"termid":"MONDO:0012426","xrefs":{"Monarch":{"xref_id":"0012426"}}}


id: GO:0060476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-based process in which a protein is transported to, or maintained in, a specific location in the sperm as part of the acrosome reaction.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein localization","termid":"GO:0008104"},{"relation_name":"is_a","term_name":"actin filament-based process","termid":"GO:0030029"},{"relation_name":"part_of","term_name":"acrosome reaction","termid":"GO:0007340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization involved in acrosome reaction","synonyms":[{"name":"protein localisation involved in acrosome reaction","type":"exact"}],"termid":"GO:0060476"}


id: PBO:0048167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fizzy and cell division cycle 20 related 1","termid":"PBO:0048167"}


id: MONDO:0000119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenital heart defects, multiple types","synonyms":[{"name":"CHTD","type":"related"}],"termid":"MONDO:0000119","xrefs":{"Monarch":{"xref_id":"0000119"}}}


id: PBO:0080483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 3A","termid":"PBO:0080483"}


id: GO:0008989
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + rRNA = S-adenosyl-L-homocysteine + rRNA containing N1-methylguanine.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-methyltransferase activity","termid":"GO:0008170"},{"relation_name":"is_a","term_name":"rRNA (guanine) methyltransferase activity","termid":"GO:0016435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0140098","GO:0016740"],"is_obsolete":false,"name":"rRNA (guanine-N1-)-methyltransferase activity","secondary_identifiers":["KEGG_REACTION:R07233"],"synonyms":[{"name":"S-adenosyl-L-methionine:rRNA (guanine-1-N-)-methyltransferase activity","type":"exact"},{"name":"S-adenosyl-L-methionine:rRNA (guanine-N1-)-methyltransferase activity","type":"related"},{"name":"ribosomal ribonucleate guanine 1-methyltransferase activity","type":"exact"}],"termid":"GO:0008989"}


id: PBO:0113518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin binding protein involved in endosomal protein sorting; K48-, K63-Ub chain binding protein that preferentially binds K63-linked chains in vitro; subunit of the ESCRT-0 complex that binds to ubiquitin via two ubiquitin-interacting motifs (UIMs) and is involved in sorting cargo into multivesicular bodies; required for recycling Golgi proteins, forming lumenal membranes and sorting ubiquitinated proteins destined for degradation","termid":"PBO:0113518"}


id: GO:0050247
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + raucaffricine = D-glucose + vomilenine.","definition_xrefs":["RHEA:14557","EC:3.2.1.125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"beta-glucosidase activity","termid":"GO:0008422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"raucaffricine beta-glucosidase activity","secondary_identifiers":["MetaCyc:RAUCAFFRICINE-BETA-GLUCOSIDASE-RXN","KEGG_REACTION:R03703"],"synonyms":[{"name":"raucaffricine b-glucosidase activity","type":"exact"},{"name":"raucaffricine beta-D-glucohydrolase activity","type":"related"},{"name":"raucaffricine beta-D-glucosidase activity","type":"related"},{"name":"raucaffricine glucosidase activity","type":"related"}],"termid":"GO:0050247"}


id: PBO:0045233
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C19 pseudogene 1","termid":"PBO:0045233"}


id: PBO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_phosphorylation_during_vegetative_growth","termid":"PBO:0031448"}


id: GO:0021561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the facial nerve over time, from its formation to the mature structure. This sensory and motor nerve supplies the muscles of facial expression and the expression and taste at the anterior two-thirds of the tongue. The principal branches are the superficial ophthalmic, buccal, palatine and hyomandibular. The main trunk synapses within pterygopalatine ganglion in the parotid gland and this ganglion then gives off nerve branches which supply the lacrimal gland and the mucous secreting glands of the nasal and oral cavities.","definition_xrefs":["ISBN:0838580343","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve development","termid":"GO:0021545"},{"relation_name":"part_of","term_name":"preganglionic parasympathetic fiber development","termid":"GO:0021783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"facial nerve development","synonyms":[{"name":"CN VII development","type":"related"},{"name":"cranial nerve 7 development","type":"exact"},{"name":"cranial nerve VII development","type":"exact"}],"termid":"GO:0021561"}


id: PBO:0043381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clustered mitochondria homolog pseudogene 11","termid":"PBO:0043381"}


id: PBO:0066444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"REV1 DNA directed polymerase","termid":"PBO:0066444"}


id: GO:0030881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to beta-2-microglobulin.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"beta-2-microglobulin binding","termid":"GO:0030881"}


id: GO:0004568
data:
  {"annotated_genes":["SJAG_00620"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80112],"is_not":false,"summary":null,"term":"GO:0004568"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of (1->4)-beta linkages of N-acetyl-D-glucosamine (GlcNAc) polymers of chitin and chitodextrins.","definition_xrefs":["PMID:11468293","GOC:bf","GOC:kah","GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00620":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"chitinase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-6786421"],"termid":"GO:0004568","terms_by_termid":{"GO:0004568":null}}


id: PBO:0068161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 468","termid":"PBO:0068161"}


id: SO:0001482
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An enhancer that drives the pattern of transcription and binds to the same TF as the primary enhancer, but is located in the intron of or on the far side of a neighboring gene.","definition_xrefs":["PMID:22083793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enhancer","termid":"SO:0000165"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shadow_enhancer","synonyms":[{"name":"shadow enhancer","type":"exact"}],"termid":"SO:0001482"}


id: PBO:0045084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta like canonical Notch ligand 1","termid":"PBO:0045084"}


id: MONDO:0010274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"testicular germ cell tumor","termid":"MONDO:0010108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular germ cell tumor 1","secondary_identifiers":["MEDGEN:337402","MESH:C564559","OMIM:300228","UMLS:C1846164"],"synonyms":[{"name":"TGCT1","type":"exact"},{"name":"testicular germ cell tumor","type":"broad"},{"name":"testicular germ cell tumor 1","type":"exact"},{"name":"testicular germ cell tumour","type":"broad"}],"termid":"MONDO:0010274","xrefs":{"Monarch":{"xref_id":"0010274"}}}


id: GO:0002557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of histamine by a basophil or group of basophils.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histamine secretion involved in inflammatory response","termid":"GO:0002441"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"basophil degranulation","termid":"GO:0002561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"histamine secretion by basophil","termid":"GO:0002557"}


id: PBO:0044584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysbindin domain containing 2","termid":"PBO:0044584"}


id: MOD:01516
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Modifications that have monoisotopic mass differences from their respective origins of 144.099-144.106 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at a resolution below 0.01 Da","termid":"MOD:01514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modifications with monoisotopic mass diferences that are nominally equal at 144.099-144.106 Da.","termid":"MOD:01516"}


id: PBO:0028727
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cytoskeleton_organization_at_cell_tip","termid":"PBO:0028727"}


id: FYPO:0008263
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a protein kinase activity is absent during a cellular response to  osmotic stress.","definition_xrefs":["PMID:24498240"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein kinase activity","termid":"FYPO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abolished protein kinase activity in response to osmotic stress","termid":"FYPO:0008263"}


id: FYPO:0000497
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitochondrial transport is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial transport","termid":"FYPO:0000495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased rate of mitochondrial transport","synonyms":[{"name":"decreased rate of mitochondrial transport during mitotic cell cycle","type":"related"},{"name":"decreased rate of mitochondrial transport during vegetative growth","type":"exact"},{"name":"mitochondrial transport: decreased rate","type":"related"},{"name":"reduced rate of mitochondrial transport","type":"exact"}],"termid":"FYPO:0000497"}


id: FYECO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any experimental condition that includes heat shock, i.e. a step in which cells or samples are briefly exposed to a very high temperature.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"grouping heat shock","termid":"FYECO:0000116"}


id: GO:0004210
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-7 activity (obsolete GO:0004210)","synonyms":[{"name":"caspase-7 activity","type":"exact"}],"termid":"GO:0004210"}


id: FYPO:0000925
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which chromosomes are not segregated equally to the two spindle poles in a meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic chromosome segregation","termid":"FYPO:0000151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"unequal meiotic chromosome segregation","synonyms":[{"name":"abnormal meiotic chromosome disjunction","type":"exact"},{"name":"chromosome non-disjunction at meiosis","type":"related"},{"name":"meiotic chromosome nondisjunction","type":"related"}],"termid":"FYPO:0000925"}


id: MONDO:0700075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital muscular dystrophy in which the cause of the disease is a variation in the POMGNT2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital muscular dystrophy","termid":"MONDO:0019950"},{"relation_name":"is_a","term_name":"myopathy caused by variation in POMGNT2","termid":"MONDO:0700069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0024322","MONDO:0005066","MONDO:0002320"],"is_obsolete":false,"name":"congenital muscular dystrophy caused by variation in POMGNT2","synonyms":[{"name":"congenital muscular dystrophy caused by mutation in POMGNT2","type":"exact"},{"name":"congenital muscular dystrophy-POMGNT2 related","type":"exact"}],"termid":"MONDO:0700075","xrefs":{"Monarch":{"xref_id":"0700075"}}}


id: PR:P31406
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase catalytic subunit A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00670","PANTHER:PTHR15184:SF7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase catalytic subunit A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC343.05","secondary_identifiers":["UniProtKB:P31406"],"synonyms":[{"name":"Spom972h-ATP6V1A","type":"exact"},{"name":"V-ATPase 67 kDa subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"V-ATPase subunit A (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit alpha (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P31406"}


id: GO:0044786
data:
  {"annotated_genes":["SJAG_03843","SJAG_02439","SJAG_04272","SJAG_02294","SJAG_02667","SJAG_01677","SJAG_04879","SJAG_01068","SJAG_02690","SJAG_03927","SJAG_05239","SJAG_03720","SJAG_02199","SJAG_02198","SJAG_02182","SJAG_01832","SJAG_00696","SJAG_05197","SJAG_04341","SJAG_01823","SJAG_03451","SJAG_00364","SJAG_03898","SJAG_02172","SJAG_00618","SJAG_02908","SJAG_00573","SJAG_06022","SJAG_02610","SJAG_00247","SJAG_00863","SJAG_00814","SJAG_00728","SJAG_03722","SJAG_04995","SJAG_03780","SJAG_02039","SJAG_00400","SJAG_02348","SJAG_02818","SJAG_01644","SJAG_03048","SJAG_03525","SJAG_02079","SJAG_01210","SJAG_00874","SJAG_03438","SJAG_04877","SJAG_01762","SJAG_01010","SJAG_02992","SJAG_02822","SJAG_01374","SJAG_02074","SJAG_00327","SJAG_00857","SJAG_01076","SJAG_04150","SJAG_02607","SJAG_04210","SJAG_03695","SJAG_03160","SJAG_01884","SJAG_04816","SJAG_02162","SJAG_04190","SJAG_01410","SJAG_00884","SJAG_00729","SJAG_05232","SJAG_05180","SJAG_03495","SJAG_04671","SJAG_01221","SJAG_04183","SJAG_00272","SJAG_00399","SJAG_01354","SJAG_03855","SJAG_00198"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114797,99159],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902298"},{"annotations":[115624,111987,117464,109381],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140529"},{"annotations":[67156,72315,114573,111990,117466,115626,69238],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902983"},{"annotations":[105337],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140530"},{"annotations":[113441,57505,76687,64061,112611,101433,109384,105339,117468,93975,101370,119404,96562,109276,115213,75397,72919],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902975"},{"annotations":[106244,97251,120258,111150,106962,104844],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903459"},{"annotations":[106245,95975,109016,109385,97252,91585,97284,106963],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903460"},{"annotations":[113813,111166],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990505"},{"annotations":[57685,73940,80211],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902977"},{"annotations":[117083,105340,112613],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902985"},{"annotations":[111600,118865,114575,100254,100963,109788,98026,97083,91177,65348,109764,111122,96843,98192,92958],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1990426"},{"annotations":[118910],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903464"},{"annotations":[104385,110934,99784],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1903467"},{"annotations":[104974],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902315"},{"annotations":[118314,113606,113958,114886,101295,91597,106441,100129,109872,106346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033260"},{"annotations":[94663,97069,74111,102633,102667,103525,106170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"},{"annotations":[119345,114094],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903468"},{"annotations":[118293,91069,104391,108653],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904514"},{"annotations":[104395],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903465"},{"annotations":[57509,63875,62033,58877,62090,67564,64069],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006279"},{"annotations":[104966,106171,90310,114576],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903469"}]},"cv_name":"biological_process","definition":"The DNA-dependent DNA replication that takes place as part of the cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"cell cycle 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cycle DNA replication","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0044786","terms_by_termid":{"GO:0006279":null,"GO:0033260":null,"GO:0140529":null,"GO:0140530":null,"GO:1902298":null,"GO:1902315":null,"GO:1902975":null,"GO:1902977":null,"GO:1902983":null,"GO:1902985":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null,"GO:1903464":null,"GO:1903465":null,"GO:1903467":null,"GO:1903468":null,"GO:1903469":null,"GO:1904514":null,"GO:1990426":null,"GO:1990505":null}}


id: MONDO:1012452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal cobalamin (vitamin B12) malabsorption, non-human animal","termid":"MONDO:1011719"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intestinal cobalamin (vitamin B12) malabsorption, domestic cat","secondary_identifiers":["OMIA:001791-9685"],"termid":"MONDO:1012452","xrefs":{"Monarch":{"xref_id":"1012452"}}}


id: GO:0046527
data:
  {"annotated_genes":["SJAG_01950","SJAG_01288","SJAG_00876","SJAG_04236","SJAG_05285","SJAG_01427","SJAG_00129","SJAG_03656","SJAG_00394","SJAG_03587","SJAG_02222","SJAG_04571","SJAG_03764","SJAG_01531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81947,77791,115221,76736],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003843"},{"annotations":[80788,95355,103080],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003825"},{"annotations":[119856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033840"},{"annotations":[117883],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140752"},{"annotations":[81956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042283"},{"annotations":[70943],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106073"},{"annotations":[79168],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042281"},{"annotations":[68393],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004581"},{"annotations":[81481],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003980"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a glucosyl group to an acceptor molecule, typically another carbohydrate or a lipid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00394":null,"SJAG_00876":null,"SJAG_01288":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01950":null,"SJAG_02222":null,"SJAG_03587":null,"SJAG_03656":null,"SJAG_03764":null,"SJAG_04236":null,"SJAG_04571":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016757"],"is_obsolete":false,"name":"glucosyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0046527","terms_by_termid":{"GO:0003825":null,"GO:0003843":null,"GO:0003980":null,"GO:0004581":null,"GO:0033840":null,"GO:0042281":null,"GO:0042283":null,"GO:0106073":null,"GO:0140752":null}}


id: GO:0097055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of agmatine ((4-aminobutyl)guanidine, NH2-CH2-CH2-CH2-CH2-NH-C(-NH2)(=NH)). Agmatine is the decarboxylation product of the amino acid arginine and is an intermediate in polyamine biosynthesis. It is synthesized in the brain, stored in synaptic vesicles, accumulated by uptake, released by membrane depolarization, and inactivated by agmatinase.","definition_xrefs":["GOC:pr","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary amino compound biosynthetic process","termid":"GO:1901162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"agmatine biosynthetic process","secondary_identifiers":["Reactome:R-HSA-351143"],"synonyms":[{"name":"agmatine anabolism","type":"exact"},{"name":"agmatine biosynthesis","type":"exact"},{"name":"agmatine formation","type":"exact"},{"name":"agmatine synthesis","type":"exact"}],"termid":"GO:0097055"}


id: PBO:0067953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 255","termid":"PBO:0067953"}


id: PBO:0039361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC membrane recruitment protein 3","termid":"PBO:0039361"}


id: GO:0048926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the electrosensory lateral line system over time, from its formation to the mature structure.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lateral line system development","termid":"GO:0048925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"electrosensory lateral line system development","termid":"GO:0048926"}


id: MONDO:0044283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete body mass index quantitative trait locus 18 (obsolete MONDO:0044283)","secondary_identifiers":["OMIM:615457"],"synonyms":[{"name":"BMIQ18","type":"related"},{"name":"body MASS index quantitative trait locus 18","type":"related"},{"name":"obesity, susceptibility to","type":"related"},{"name":"obesity, susceptibility to, BMIQ18","type":"exact"}],"termid":"MONDO:0044283","xrefs":{"Monarch":{"xref_id":"0044283"}}}


id: MONDO:0002419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurological disorder presenting in childhood that is characterized by motor and/or phonic tics that occur daily or nearly daily for one to twelve months and are not attributed to an identifiable cause.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tic disorder","termid":"MONDO:0002420"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient tic disorder","secondary_identifiers":["ICD9:307.21","MEDGEN:52814","NCIT:C116767","ICD10CM:F95.0","SCTID:56573006","UMLS:C0040702","DOID:2768"],"synonyms":[{"name":"benign Tic disorder of childhood","type":"exact"}],"termid":"MONDO:0002419","xrefs":{"Monarch":{"xref_id":"0002419"}}}


id: GO:0097182
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex that contains protein C inhibitor (SERPINA5) and coagulation factor Xa (F10); formation of the complex inhibits the serine protease activity of coagulation factor Xa.","definition_xrefs":["GOC:ans","PMID:6323392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine protease inhibitor complex","termid":"GO:0097180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"protein C inhibitor-coagulation factor Xa complex","synonyms":[{"name":"PCI-coagulation factor Xa complex","type":"exact"},{"name":"SERPINA5-coagulation factor Xa complex","type":"exact"},{"name":"plasma serine protease inhibitor-coagulation factor Xa complex","type":"exact"},{"name":"serpin A5-coagulation factor Xa complex","type":"exact"}],"termid":"GO:0097182"}


id: GO:1904111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of plus-end directed microfilament motor activity.","definition_xrefs":["GOC:kmv","GO_REF:0000059","GOC:TermGenie","PMID:25717181"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of plus-end directed microfilament motor activity (obsolete GO:1904111)","synonyms":[{"name":"down regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"down regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"down regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"down regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"down-regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"down-regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"down-regulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"down-regulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"downregulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"downregulation of plus-end directed actin filament motor activity","type":"related"},{"name":"downregulation of plus-end directed actin-filament motor activity","type":"exact"},{"name":"downregulation of plus-end directed microfilament motor activity","type":"exact"},{"name":"inhibition of barbed-end directed actin-filament motor activity","type":"narrow"},{"name":"inhibition of plus-end directed actin filament motor activity","type":"related"},{"name":"inhibition of plus-end directed actin-filament motor activity","type":"narrow"},{"name":"inhibition of plus-end directed microfilament motor activity","type":"narrow"},{"name":"negative regulation of barbed-end directed actin-filament motor activity","type":"exact"},{"name":"negative regulation of plus-end directed actin filament motor activity","type":"related"},{"name":"negative regulation of plus-end directed actin-filament motor activity","type":"exact"}],"termid":"GO:1904111"}


id: PBO:0042511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin related family member 5","termid":"PBO:0042511"}


id: GO:0032752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-3 production","termid":"GO:0032672"},{"relation_name":"positively_regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of interleukin-3 production","secondary_identifiers":["GO:0045401"],"synonyms":[{"name":"activation of interleukin-3 production","type":"narrow"},{"name":"positive regulation of IL-3 production","type":"exact"},{"name":"positive regulation of interleukin-3 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-3 production","type":"narrow"},{"name":"up regulation of interleukin-3 production","type":"exact"},{"name":"up-regulation of interleukin-3 production","type":"exact"},{"name":"upregulation of interleukin-3 production","type":"exact"}],"termid":"GO:0032752"}


id: PBO:0109230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLF7 pseudogene 1","termid":"PBO:0109230"}


id: MONDO:1011822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"squamous cell carcinoma of the digit, non-human animal","secondary_identifiers":["OMIA:001787"],"termid":"MONDO:1011822","xrefs":{"Monarch":{"xref_id":"1011822"}}}


id: GO:0038068
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the concomitant phosphorylation of threonine (T) and tyrosine (Y) residues in a Thr-Glu-Tyr (TEY) thiolester sequence in a MAP kinase (MAPK) substrate, as part of a MAPK signaling cascade that contributes to cell wall organization or biogenesis.","definition_xrefs":["GOC:signaling"],"gene_count":0,"genotype_count":0,"name":"obsolete MAP kinase kinase activity involved in cell wall organization or biogenesis (obsolete GO:0038068)","synonyms":[{"name":"MAP kinase kinase activity involved in cell wall biogenesis","type":"narrow"},{"name":"MAP2K activity involved in cell wall integrity","type":"exact"},{"name":"MAPKK activity involved in cell wall integrity","type":"exact"}],"termid":"GO:0038068"}


id: MONDO:0008753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A metabolic disease characterized by the accumulation of homogentisic acid (HGA) and its oxidized product, benzoquinone acetic acid (BQA), in various tissues (e.g. cartilage, connective tissue) and body fluids (urine, sweat), causing urine to darken when exposed to air as well as grey-blue coloration of the sclera and ear helix (ochronosis), and a disabling joint disease involving both the axial and peripheral joints (ochronotic arthropathy).","definition_xrefs":["Orphanet:56"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"excluded_subClassOf","term_name":"obsolete pigmented conjunctival lesion (obsolete MONDO:0020203)","termid":"MONDO:0020203"},{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"alkaptonuria","secondary_identifiers":["NANDO:2200504","NCIT:C84546","MESH:D000474","GARD:5775","NORD:750","DOID:9270","MedDRA:10001689","SCTID:360378009","OMIM:203500","UMLS:C0002066","icd11.foundation:1761652827","MEDGEN:1413","ICD9:270.2"],"synonyms":[{"name":"aku","type":"related"},{"name":"alcaptonuria","type":"exact"},{"name":"alkaptonuria","type":"exact"},{"name":"alkaptonuric ochronosis","type":"related"},{"name":"deficiency of homogentisicase","type":"related"},{"name":"hereditary ochronosis","type":"exact"},{"name":"homogentisate 1,2-dioxygenase deficiency","type":"exact"},{"name":"homogentisic acid oxidase deficiency","type":"exact"},{"name":"homogentisic acidura","type":"related"},{"name":"ochronosis, hereditary","type":"related"}],"termid":"MONDO:0008753","xrefs":{"Monarch":{"xref_id":"0008753"}}}


id: MONDO:1011804
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital myopathy with fiber-type disproportion, non-human animal","secondary_identifiers":["OMIA:001796"],"termid":"MONDO:1011804","xrefs":{"Monarch":{"xref_id":"1011804"}}}


id: MONDO:0017734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sialidosis is a lysosomal storage disease, belonging to the group of oligosaccharidoses or glycoproteinoses, with a wide clinical spectrum that is divided into two main clinical subtypes: sialidosis type I, the milder, non dysmorphic form of the disease characterized by gait abnormalities, progressive visual loss, bilateral macular cherry red spots and myoclonus, that presents in adolescence or adulthood (second or third decade of life); and sialidosis type II the more severe, early onset form, characterized by a progressive and severe mucopolysaccharidosis-like phenotype with coarse facies, visceromegaly, dysostosis multiplex, and developmental delay. Bilateral macular cherry red spots are also present. Sialidosis type II has been further divided into congenital (with hydrops fetalis), infantile and juvenile presentations.","definition_xrefs":["Orphanet:309294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharidosis","termid":"MONDO:0019251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"sialidosis","secondary_identifiers":["GARD:21331","NANDO:1200116","icd11.foundation:1180347697","MedDRA:10058800","MEDGEN:120621","NORD:1713","SCTID:38795005","NANDO:2200556","UMLS:C0268226"],"termid":"MONDO:0017734","xrefs":{"Monarch":{"xref_id":"0017734"}}}


id: PBO:0077333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 70","termid":"PBO:0077333"}


id: PBO:0044572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DBF4 zinc finger pseudogene 2","termid":"PBO:0044572"}


id: GO:0044780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a bacterial-type flagellum, a motor complex composed of an extracellular helical protein filament coupled to a rotary motor embedded in the cell envelope which functions in cell motility.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell projection assembly","termid":"GO:0030031"},{"relation_name":"is_a","term_name":"bacterial-type flagellum organization","termid":"GO:0044781"},{"relation_name":"is_a","term_name":"membraneless organelle assembly","termid":"GO:0140694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"bacterial-type flagellum assembly","synonyms":[{"name":"bacterial flagellum assembly","type":"exact"}],"termid":"GO:0044780"}


id: GO:1900867
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving sarcinapterin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid metabolic process","termid":"GO:0072350"},{"relation_name":"is_a","term_name":"methanopterin-containing compound metabolic process","termid":"GO:2001115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"sarcinapterin metabolic process","synonyms":[{"name":"sarcinapterin metabolism","type":"exact"}],"termid":"GO:1900867"}


id: MONDO:0022820
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital articular rigidity","secondary_identifiers":["UMLS:C0595987","MEDGEN:108568"],"termid":"MONDO:0022820","xrefs":{"Monarch":{"xref_id":"0022820"}}}


id: GO:0045346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of MHC class II.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of macromolecule biosynthetic process","termid":"GO:0010556"},{"relation_name":"regulates","term_name":"MHC class II biosynthetic process","termid":"GO:0045342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of MHC class II biosynthetic process","synonyms":[{"name":"regulation of MHC class II anabolism","type":"exact"},{"name":"regulation of MHC class II biosynthesis","type":"exact"},{"name":"regulation of MHC class II formation","type":"exact"},{"name":"regulation of MHC class II synthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class II biosynthesis","type":"exact"},{"name":"regulation of major histocompatibility complex class II biosynthetic process","type":"exact"}],"termid":"GO:0045346"}


id: PBO:0090722
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic glutaminyl-tRNA ligase Qrs1","termid":"PBO:0090722"}


id: MONDO:0017010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chromosome Xq duplication is a chromosome abnormality that affects many different parts of the body. People with this condition have an extra copy of the genetic material located on the long arm (q) of the X chromosome in each cell. The severity of the condition and the associated signs and symptoms vary based on the size and location of theduplication;the genes involved; and the sex of the affected person. In general, males are typically more severely affected than females and often experience intellectual disability, developmental delay, short stature, abnormalities of the reproductive organs, anddistinctive craniofacial features. Many females with this duplication do not have any symptoms or are only affected with short stature; however, some may be just as severely affected as males with the condition. Most cases are inherited in an X-linked manner, often from a mother with no signs or symptoms of the condition. Treatment is based on the signs and symptoms present in each person.","definition_xrefs":["GARD:0005369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial duplication of chromosome X","termid":"MONDO:0017008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial duplication of the long arm of chromosome X","secondary_identifiers":["GARD:5369","MEDGEN:162887","Orphanet:263783","MESH:C536732","UMLS:C0795891"],"synonyms":[{"name":"Duplication Xq","type":"related"},{"name":"Xq duplication","type":"related"},{"name":"Xq trisomy","type":"related"},{"name":"chromosome Xq duplication","type":"related"},{"name":"partial duplication of chromosome Xq","type":"exact"},{"name":"partial duplication of the long arm of chromosome type X","type":"exact"},{"name":"partial trisomy Xq","type":"related"},{"name":"partial trisomy of chromosome Xq","type":"exact"},{"name":"partial trisomy of the long arm of chromosome X","type":"exact"},{"name":"trisomy Xq","type":"related"}],"termid":"MONDO:0017010","xrefs":{"Monarch":{"xref_id":"0017010"}}}


id: PBO:0029356
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Ssb1_foci","termid":"PBO:0029356"}


id: PBO:0027031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_nuclear_envelope","termid":"PBO:0027031"}


id: GO:0098623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: SeO3(2-) + 3 NADPH + 5H+ = H2Se +  3NADP+ + 3H2O.","definition_xrefs":["PMID:1321713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"selenite reductase (NADPH) activity","secondary_identifiers":["Reactome:R-HSA-2408558"],"synonyms":[{"name":"selenite reductase activity","type":"exact"}],"termid":"GO:0098623"}


id: GO:1900270
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of reverse transcription.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of reverse transcription","termid":"GO:1900268"},{"relation_name":"is_a","term_name":"positive regulation of DNA biosynthetic process","termid":"GO:2000573"},{"relation_name":"positively_regulates","term_name":"reverse transcription","termid":"GO:0001171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259"],"is_obsolete":false,"name":"positive regulation of reverse transcription","synonyms":[{"name":"activation of reverse transcription","type":"narrow"},{"name":"up regulation of reverse transcription","type":"exact"},{"name":"up-regulation of reverse transcription","type":"exact"},{"name":"upregulation of reverse transcription","type":"exact"}],"termid":"GO:1900270"}


id: GO:0071770
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components, including (phenyl)phthiocerol, phthiodiolone, phthiotriol dimycocerosate and diphthioceranate, to form the DIM/DIP layer of the Actinobacterium-type cell wall.","definition_xrefs":["PMID:3149973","GOC:mah","PMID:15653820","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"part_of","term_name":"Actinobacterium-type cell wall biogenesis","termid":"GO:0071766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0071554","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"DIM/DIP cell wall layer assembly","synonyms":[{"name":"DIM cell wall layer assembly","type":"exact"},{"name":"DIM/DIP cell wall layer biogenesis","type":"related"},{"name":"PDIM cell wall layer assembly","type":"exact"}],"termid":"GO:0071770"}


id: MONDO:0100603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodevelopmental disorder, frequently presenting with lymphatic dysplasia, craniofacial and limb anomalies, and secondary lymphopenia from altered immune cell trafficking, in which the cause of the disease is a variation in the FAT4 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"FAT4-related neurodevelopmental disorder","termid":"MONDO:0100603","xrefs":{"Monarch":{"xref_id":"0100603"}}}


id: GO:0045315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of compound eye photoreceptor development.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of eye photoreceptor cell development","termid":"GO:0042479"},{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor development","termid":"GO:0045314"},{"relation_name":"positively_regulates","term_name":"compound eye photoreceptor development","termid":"GO:0042051"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of compound eye photoreceptor development","synonyms":[{"name":"activation of eye photoreceptor development","type":"broad"},{"name":"positive regulation of eye photoreceptor development","type":"broad"},{"name":"stimulation of eye photoreceptor development","type":"broad"},{"name":"up regulation of eye photoreceptor development","type":"broad"},{"name":"up-regulation of eye photoreceptor development","type":"broad"},{"name":"upregulation of eye photoreceptor development","type":"broad"}],"termid":"GO:0045315"}


id: GO:1901999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving homogentisate.","definition_xrefs":["PMID:22980205","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"homogentisate metabolic process","synonyms":[{"name":"homogentisate metabolism","type":"exact"}],"termid":"GO:1901999"}


id: GO:0150002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The dendrite of the dendritic tree that is farthest away from the neuronal cell body (the soma).","definition_xrefs":["PMID:20629984","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"distal dendrite","termid":"GO:0150002"}


id: GO:0008352
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex possessing an activity that couples ATP hydrolysis to the severing of microtubules; usually a heterodimer comprising a catalytic subunit (often 60kDa) and a regulatory subunit (often 80 kDa).","definition_xrefs":["PMID:10910766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule associated complex","termid":"GO:0005875"},{"relation_name":"part_of","term_name":"microtubule organizing center","termid":"GO:0005815"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0005575","GO:0015630","GO:0032991"],"is_obsolete":false,"name":"katanin complex","termid":"GO:0008352"}


id: GO:0097466
data:
  {"annotated_genes":["SJAG_01858","SJAG_03032"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95552,97719],"is_not":false,"summary":null,"term":"GO:0097466"}]},"cv_name":"biological_process","definition":"An ERAD pathway whereby endoplasmic reticulum (ER)-resident glycoproteins are targeted for degradation. Includes differential processing of the glycoprotein sugar chains, retrotranslocation to the cytosol and degradation by the ubiquitin-proteasome pathway. A glycoprotein is a compound in which a carbohydrate component is covalently bound to a protein component.","definition_xrefs":["GOC:al","PMID:16079177","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycoprotein catabolic process","termid":"GO:0006516"},{"relation_name":"is_a","term_name":"ERAD pathway","termid":"GO:0036503"},{"relation_name":"is_a","term_name":"response to glycoprotein","termid":"GO:1904587"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01858":null,"SJAG_03032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0030163","GO:0008150"],"is_obsolete":false,"name":"ubiquitin-dependent glycoprotein ERAD pathway","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"ER-associated glycoprotein degradation","type":"exact"},{"name":"glycoprotein ERAD","type":"exact"},{"name":"gpERAD","type":"exact"},{"name":"misfolded or incompletely synthesized glycoprotein catabolic process","type":"broad"}],"termid":"GO:0097466","terms_by_termid":{"GO:0097466":null}}


id: FYPO:0004804
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which actin fusion focus assembly does not occur. An actin fusion focus normally forms during mating at the site where the two cells will fuse.","definition_xrefs":["PMID:25825517","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"},{"relation_name":"is_a","term_name":"abnormal actin fusion focus assembly","termid":"FYPO:0006108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0004803","FYPO:0005447","FYPO:0000301"],"is_obsolete":false,"name":"abolished actin fusion focus assembly","synonyms":[{"name":"abolished actin fusion focus formation","type":"exact"},{"name":"actin fusion focus assembly abolished","type":"exact"}],"termid":"FYPO:0004804"}


id: PATO:0002175
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's changed direction of position towards another entity.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spatial pattern","termid":"PATO:0000060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deviation","termid":"PATO:0002175"}


id: GO:0051991
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: di-trans-octa-cis-undecaprenyl diphospho-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + UDP-N-acetyl-alpha-D-glucosamine = di-trans-octa-cis-undecaprenyl diphospho-[N-acetyl-alpha-D-glucosaminyl-(1->4)]-N-acetyl-alpha-D-muramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimeloyl-D-alanyl-D-alanine + H+ + UDP.","definition_xrefs":["RHEA:31227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"UDP-N-acetyl-D-glucosamine:N-acetylmuramoyl-L-alanyl-D-glutamyl-meso-2,6-diaminopimelyl-D-alanyl-D-alanine-diphosphoundecaprenol 4-beta-N-acetylglucosaminlytransferase activity","secondary_identifiers":["MetaCyc:NACGLCTRANS-RXN"],"termid":"GO:0051991"}


id: PBO:0080163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variable charge Y-linked","termid":"PBO:0080163"}


id: PBO:0061330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear pore complex interacting protein family member B8","termid":"PBO:0061330"}


id: FYPO:0002145
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the nucleus is normal (i.e. indistinguishable from wild type) during a cellular response to diethyl maleate (DEM), a compound which can induce oxidative stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to nucleus during cellular response to oxidative stress","termid":"FYPO:0001789"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein localization to nucleus during cellular response to DEM","synonyms":[{"name":"normal protein localisation to nucleus during cellular response to DEM","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to DEM during mitotic cell cycle","type":"related"},{"name":"normal protein localization to nucleus during cellular response to DEM during vegetative growth","type":"exact"},{"name":"normal protein localization to nucleus during cellular response to diethyl maleate","type":"exact"}],"termid":"FYPO:0002145"}


id: PATO:0001424
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with very low wavelength of that portion of the visible spectrum lying between reddish blue or bluish purple, evoked in the human observer by radiant energy with wavelengths of approximately 420 to 380 nanometers.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Violet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"violet","termid":"PATO:0001424"}


id: MONDO:0016999
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X chromosome number anomaly (obsolete MONDO:0016999)","secondary_identifiers":["Orphanet:263714"],"termid":"MONDO:0016999","xrefs":{"Monarch":{"xref_id":"0016999"}}}


id: PBO:0049376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIIA pseudogene 6","termid":"PBO:0049376"}


id: MONDO:0016148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete qualitative or quantitative defects of collagen 6 (obsolete MONDO:0016148)","termid":"MONDO:0016148","xrefs":{"Monarch":{"xref_id":"0016148"}}}


id: MONDO:0003798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete epithelioid sarcoma (obsolete MONDO:0003798)","termid":"MONDO:0003798","xrefs":{"Monarch":{"xref_id":"0003798"}}}


id: GO:1905720
data:
  {"annotated_genes":["SJAG_02761"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[102385],"is_not":false,"summary":null,"term":"GO:1905720"}]},"cv_name":"cellular_component","definition":"Any microtubule bundle that is part of a cytoplasm.","definition_xrefs":["GO_REF:0000064","GOC:TermGenie","PMID:26124291","PMID:11007487"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule bundle","termid":"GO:0097427"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02761":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"cytoplasmic microtubule bundle","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule bundle of cytoplasm","type":"exact"},{"name":"microtubule fascicle of cytoplasm","type":"exact"}],"termid":"GO:1905720","terms_by_termid":{"GO:1905720":null}}


id: PBO:0012612
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papulacandin B resistance","termid":"PBO:0012612"}


id: MONDO:0032745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with variable intellectual impairment and behavioral abnormalities","secondary_identifiers":["MEDGEN:1676192","GARD:18517","OMIM:618430","UMLS:C5193092"],"synonyms":[{"name":"DDVIBA","type":"related"},{"name":"DEVELOPMENTAL DELAY WITH VARIABLE INTELLECTUAL IMPAIRMENT AND BEHAVIORAL ABNORMALITIES","type":"related"},{"name":"developmental delay with variable intellectual impairment and behavioral abnormalities","type":"exact"}],"termid":"MONDO:0032745","xrefs":{"Monarch":{"xref_id":"0032745"}}}


id: GO:0120304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism changes its pigmentation (lightening in response to a brighter environment or darkening in response to a dimmer environment) in response to a change in light intensity detected by light sensitive cells in the integument.","definition_xrefs":["GOC:cvs","GOC:krc","PMID:29239123","PMID:32898924"],"direct_ancestors":[{"relation_name":"is_a","term_name":"background adaptation","termid":"GO:0120302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"integument-mediated background adaptation","termid":"GO:0120304"}


id: SO:0001993
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Intronic positions associated with cis-splicing. Contains the first and second positions immediately before the exon and the first, second and fifth positions immediately after.","definition_xrefs":["SANGER:am"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis_splice_site","termid":"SO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extended_cis_splice_site","synonyms":[{"name":"extended cis splice site","type":"exact"}],"termid":"SO:0001993"}


id: PBO:0065993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid induced 2","termid":"PBO:0065993"}


id: GO:0000262
data:
  {"annotated_genes":["SJAG_00153","SJAG_03068","SJAG_03906","SJAG_00611","SJAG_MIT06","SJAG_01807","SJAG_01262","SJAG_MIT05","SJAG_MIT07"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[64850,90600,101312,104890,104909,107963,121118,121125,121126],"is_not":false,"summary":null,"term":"GO:0000262"}]},"cv_name":"cellular_component","definition":"A chromosome found in the mitochondrion of a eukaryotic cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome","termid":"GO:0005694"},{"relation_name":"part_of","term_name":"mitochondrial nucleoid","termid":"GO:0042645"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00153":null,"SJAG_00611":null,"SJAG_01262":null,"SJAG_01807":null,"SJAG_03068":null,"SJAG_03906":null,"SJAG_MIT05":null,"SJAG_MIT06":null,"SJAG_MIT07":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005694"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005694","GO:0005739"],"is_obsolete":false,"name":"mitochondrial chromosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"secondary_identifiers":["NIF_Subcellular:sao1186327184"],"synonyms":[{"name":"mitochondrial DNA","type":"narrow"},{"name":"mitochondrial genome","type":"related"},{"name":"mtDNA","type":"narrow"}],"termid":"GO:0000262","terms_by_termid":{"GO:0000262":null}}


id: PBO:0041299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 calcium dependent domain containing 4C","termid":"PBO:0041299"}


id: MONDO:0017435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, autosomal dominant inherited syndrome caused by mutations in the IRF6 gene. It is characterized by the presence of cleft palate, cleft lip, pits in the lower lip, web behind the knee (popliteal pterygium), syndactyly, cryptorchidism, scrotal malformation, and hypoplasia of the labia majora.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome or malformation associated with head and neck malformations (obsolete MONDO:0015501)","termid":"MONDO:0015501"},{"relation_name":"is_a","term_name":"arthrogryposis syndrome","termid":"MONDO:0015225"},{"relation_name":"is_a","term_name":"IRF6-related condition","termid":"MONDO:1040010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"popliteal pterygium syndrome","secondary_identifiers":["MEDGEN:78543","MESH:C562509","UMLS:C0265259","DOID:0060055","NCIT:C118786","ICD9:756.89","Orphanet:294963","GARD:21189","SCTID:66783006","icd11.foundation:543218573"],"synonyms":[{"name":"PPS","type":"exact"},{"name":"facio-genito-popliteal syndrome","type":"exact"}],"termid":"MONDO:0017435","xrefs":{"Monarch":{"xref_id":"0017435"}}}


id: FYPO:0002517
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which a mitotic cell cycle arrest that normally occurs in response to mitotic cell cycle checkpoint signaling is abnormal (does not occur, or occurs abnormally). Abnormal arrest may result from a problem with detection of conditions that normally trigger a checkpoint, transduction of the checkpoint signal, or the response to the checkpoint signal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"abnormal occurrence of normal mitotic cell cycle arrest","termid":"FYPO:0001026"},{"relation_name":"is_a","term_name":"abnormal cell cycle","termid":"FYPO:0000011"},{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000631","FYPO:0000002","FYPO:0000298","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"abnormal response to mitotic cell cycle checkpoint signaling","synonyms":[{"name":"abnormal mitotic cell cycle checkpoint arrest","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from checkpoint activation","type":"related"},{"name":"abnormal occurrence of mitotic cell cycle arrest resulting from defective checkpoint activation","type":"related"}],"termid":"FYPO:0002517"}


id: PBO:0069817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1103, pseudogene","termid":"PBO:0069817"}


id: GO:0042566
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, membrane-bounded organelle found in some anaerobic protozoa, which participates in ATP and molecular hydrogen formation.","definition_xrefs":["GOC:jl","PMID:11197234","PMID:11293569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"hydrogenosome","secondary_identifiers":["Wikipedia:Hydrogenosome"],"termid":"GO:0042566"}


id: PBO:0114473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA specific adenosine-34 deaminase subunit Tad3","termid":"PBO:0114473"}


id: PATO:0000320
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color hue with medium-low wavelength of that portion of the visible spectrum lying between yellow and blue, evoked in the human observer by radiant energy with wavelengths of approximately 490 to 570 nanometers.","definition_xrefs":["Dictionary:http://dictionary.reference.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"green","termid":"PATO:0000320"}


id: PATO:0000321
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of red and blue hues.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Magenta"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color","termid":"PATO:0000014"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"magenta","termid":"PATO:0000321"}


id: MONDO:0021178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Damage inflicted on the body as the direct or indirect result of an external force, with or without disruption of structural continuity.","definition_xrefs":["NCIT:C3671"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"injury","secondary_identifiers":["EFO:0000546","MESH:D014947"],"synonyms":[{"name":"injury","type":"exact"},{"name":"trauma","type":"exact"},{"name":"traumatic injury","type":"exact"},{"name":"wound","type":"exact"}],"termid":"MONDO:0021178","xrefs":{"Monarch":{"xref_id":"0021178"}}}


id: FYPO:0000109
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to papulacandin B. Cells stop growing (and may die) at a concentration of papulacandin B that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0000003","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to papulacandin B","synonyms":[{"name":"hypersensitive to papulacandin B","type":"exact"},{"name":"sensitive to papulacandin B during mitotic cell cycle","type":"related"},{"name":"sensitive to papulacandin B during vegetative growth","type":"exact"}],"termid":"FYPO:0000109"}


id: PBO:0061729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear RNA export factor 2B","termid":"PBO:0061729"}


id: PBO:0090747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi matrix protein Rud3","termid":"PBO:0090747"}


id: PBO:0039601
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acidic nuclear phosphoprotein 32 family member B pseudogene 2","termid":"PBO:0039601"}


id: GO:0002004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of the hormone vasopressin into the blood stream by the hypothalamus and pituitary gland contributing to fast regulation of blood pressure.","definition_xrefs":["ISBN:0721643949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasopressin secretion","termid":"GO:0030103"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by vasopressin","termid":"GO:0001992"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179","GO:0023052"],"is_obsolete":false,"name":"secretion of vasopressin involved in fast regulation of systemic arterial blood pressure","synonyms":[{"name":"secretion of vasopressin during fast control of blood pressure","type":"related"},{"name":"secretion of vasopressin during fast regulation of systemic arterial blood pressure","type":"related"}],"termid":"GO:0002004"}


id: PBO:0089209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, middle-meiotic Cuf2","termid":"PBO:0089209"}


id: GO:0030636
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of derivatives of acetic acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete acetate derivative biosynthetic process (obsolete GO:0030636)","synonyms":[{"name":"acetate derivative anabolism","type":"exact"},{"name":"acetate derivative biosynthesis","type":"exact"},{"name":"acetate derivative biosynthetic process","type":"exact"},{"name":"acetate derivative formation","type":"exact"},{"name":"acetate derivative synthesis","type":"exact"}],"termid":"GO:0030636"}


id: PBO:0061465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor binding factor 2","termid":"PBO:0061465"}


id: PBO:0087941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translation elongation factor 3; contains two ABC cassettes; binds and hydrolyzes ATP; interacts with mRNA independently of translation; YEF3 has a paralog, HEF3, that arose from the whole genome duplication","termid":"PBO:0087941"}


id: MONDO:0100021
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A childhood-onset epilepsy that is characterized by the presence of visually-induced focal occipital lobe seizures. A proportion of patients with this syndrome have developmental delays and learning difficulty.","direct_ancestors":[{"relation_name":"is_a","term_name":"childhood-onset self-limited focal epilepsy syndrome","termid":"MONDO:0800502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"photosensitive occipital lobe epilepsy","synonyms":[{"name":"POLE","type":"exact"}],"termid":"MONDO:0100021","xrefs":{"Monarch":{"xref_id":"0100021"}}}


id: PBO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CMT1A duplicated region transcript 15 like 2","termid":"PBO:0042600"}


id: PBO:0047658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 9 pseudogene 1","termid":"PBO:0047658"}


id: GO:0045284
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A membrane-bound flavoenzyme complex consisting of four subunits, A, B, C, and D. A and B comprise the membrane-extrinsic catalytic domain and C (InterPro:IPR003510; InterPro:IPR00224) and D (InterPro:IPR003418) link the catalytic centers to the electron-transport chain. In some species, the complex has only three subunits, and in these cases, there is only one membrane anchor instead of two. This family consists of the 13 kDa hydrophobic subunit D. This component may be required to anchor the catalytic components of the fumarate reductase complex to the cytoplasmic membrane. Fumarate reductase couples the reduction of fumarate to succinate to the oxidation of quinol to quinone, in a reaction opposite to that catalyzed by the related complex II of the respiratory chain (succinate dehydrogenase-(ubiquinone)). Examples of this component are found in bacterial species.","definition_xrefs":["InterPro:IPR004224","GOC:mtg_sensu","InterPro:IPR003418"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane fumarate reductase complex (obsolete GO:0045284)","synonyms":[{"name":"fumarate reductase complex","type":"broad"}],"termid":"GO:0045284"}


id: PBO:0080872
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YME1 like 1 ATPase","termid":"PBO:0080872"}


id: GO:1900154
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of bone trabecula formation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"bone trabecula formation","termid":"GO:0060346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of bone trabecula formation","synonyms":[{"name":"regulation of bone trabecula biogenesis","type":"related"},{"name":"regulation of bone trabeculation","type":"exact"},{"name":"regulation of skeletal trabecula biogenesis","type":"related"},{"name":"regulation of skeletal trabecula formation","type":"exact"},{"name":"regulation of skeletal trabeculation","type":"exact"}],"termid":"GO:1900154"}


id: PBO:0039427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angiopoietin like 7","termid":"PBO:0039427"}


id: PR:Q9P7V3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A translin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01818","PANTHER:PTHR10741:SF2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translin-1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30.03c","secondary_identifiers":["UniProtKB:Q9P7V3"],"synonyms":[{"name":"Spom972h-TSN","type":"exact"},{"name":"meiotically up-regulated gene 90 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"translin homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P7V3"}


id: PBO:0051519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 1 receptor type 1","termid":"PBO:0051519"}


id: GO:0099170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process, acting in the postsynapse that results in modulation of chemical synaptic transmission.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"postsynaptic modulation of chemical synaptic transmission","termid":"GO:0099170"}


id: GO:1903803
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-glutamine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glutamine transport","termid":"GO:0006868"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-glutamine import across plasma membrane","secondary_identifiers":["GO:0036229"],"synonyms":[{"name":"L-glutamine import","type":"broad"},{"name":"L-glutamine import into cell","type":"exact"},{"name":"L-glutamine uptake","type":"exact"}],"termid":"GO:1903803"}


id: PBO:0049560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 26","termid":"PBO:0049560"}


id: PATO:0002264
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's being arranged in a systematic fashion.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organization quality","termid":"PATO:0002264"}


id: SO:0000157
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A plasmid which carries within its sequence a bacteriophage replication origin. When the host bacterium is infected with \\\"helper\\\" phage, a phagemid is replicated along with the phage DNA and packaged into phage capsids.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phagemid","secondary_identifiers":["http://en.wikipedia.org/wiki/Phagemid"],"synonyms":[{"name":"phagemid vector","type":"related"}],"termid":"SO:0000157"}


id: PBO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD binding dehydrogenase family protein","termid":"PBO:0001782"}


id: PBO:0120081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLN5 lysosomal BMP synthase","termid":"PBO:0120081"}


id: PBO:0059989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 9","termid":"PBO:0059989"}


id: FYPO:0006105
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the removal of tubulin dimers from a microtubule occurs to a greater extent than normal in the lateral part of the cell.","definition_xrefs":["PMID:26443240","GO:0007019","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule depolymerization during vegetative growth","termid":"FYPO:0000902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000054","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased microtubule depolymerization at cell side","synonyms":[{"name":"increased microtubule catastrophe at cell side","type":"related"},{"name":"increased microtubule depolymerisation at cell side","type":"exact"},{"name":"increased microtubule depolymerization at cell side during mitotic cell cycle","type":"related"},{"name":"increased microtubule depolymerization at cell side during vegetative growth","type":"exact"},{"name":"increased microtubule depolymerization at lateral part of cell","type":"exact"}],"termid":"FYPO:0006105"}


id: PBO:0065182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein S (beta) pseudogene","termid":"PBO:0065182"}


id: PBO:0039996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL8B pseudogene 2","termid":"PBO:0039996"}


id: FYPO:0003501
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, is normal length, and contains one nucleus and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"inviable vegetative cell with normal cell morphology","termid":"FYPO:0002199"},{"relation_name":"is_a","term_name":"normal vegetative cell length","termid":"FYPO:0003503"},{"relation_name":"is_a","term_name":"inviable aseptate mononucleate vegetative cell","termid":"FYPO:0003763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000032","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"inviable aseptate mononucleate vegetative cell, normal cell length","synonyms":[{"name":"inviable aseptate mononucleate cell, normal cell length, during vegetative growth","type":"exact"},{"name":"inviable aseptate mononucleate vegetative cell, normal cell length during mitotic cell cycle","type":"related"},{"name":"inviable mononucleate aseptate vegetative cell, normal cell length","type":"exact"},{"name":"inviable unseptated mononucleate vegetative cell with normal cell length","type":"exact"},{"name":"lethal; aseptate mononucleate vegetative cell, normal cell length","type":"exact"}],"termid":"FYPO:0003501"}


id: PBO:0039229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AKT serine/threonine kinase 3","termid":"PBO:0039229"}


id: GO:0010649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell communication via electrical coupling. Cell communication via electrical coupling is the process that mediates signaling interactions between one cell and another cell by transfer of current between their adjacent cytoplasms via intercellular protein channels.","definition_xrefs":["GOC:tb","GOC:dph","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"regulates","term_name":"cell communication by electrical coupling","termid":"GO:0010644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cell communication by electrical coupling","termid":"GO:0010649"}


id: GO:0047169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: feruloyl-CoA + galactarate = 2-(E)-O-feruloyl-D-galactarate + CoA.","definition_xrefs":["EC:2.3.1.130","RHEA:12997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-hydroxycinnamoyltransferase activity","termid":"GO:0050737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016746","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"galactarate O-hydroxycinnamoyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03727","MetaCyc:2.3.1.130-RXN"],"synonyms":[{"name":"feruloyl-CoA:galactarate O-(hydroxycinnamoyl)transferase activity","type":"related"},{"name":"galacturate hydroxycinnamoyltransferase activity","type":"related"}],"termid":"GO:0047169"}


id: PBO:0111380
data:
  {"annotation_feature_type":"gene","cv_name":"species_dist","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific, implicated in rRNA processing","termid":"PBO:0111380"}


id: PR:O13898
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ogm1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-phosphate-mannose--protein mannosyltransferase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22A12.07c","synonyms":[{"name":"Spom972h-ogm1","type":"exact"}],"termid":"PR:O13898"}


id: _global:singly_occurring_form_of
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"singly_occurring_form_of","synonyms":[{"name":"monadic_form_of","type":"exact"}],"termid":"_global:singly_occurring_form_of"}


id: PBO:0047001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 90 member A4, pseudogene","termid":"PBO:0047001"}


id: PBO:0081058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZCCHC14 divergent transcript","termid":"PBO:0081058"}


id: MONDO:0010292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"FHL1-related myopathy","termid":"MONDO:0800462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"Uruguay Faciocardiomusculoskeletal syndrome","secondary_identifiers":["DOID:0112148","OMIM:300280","UMLS:C1846010","MESH:C564544","MEDGEN:335320"],"synonyms":[{"name":"FCMSU","type":"related"},{"name":"Fcms","type":"related"},{"name":"URUGUAY FACIOCARDIOMUSCULOSKELETAL syndrome","type":"related"},{"name":"Uruguay Faciocardiomusculoskeletal syndrome","type":"exact"},{"name":"faciocardiomusculoskeletal syndrome, Uruguay type","type":"related"},{"name":"uruguay faciocardiomusculoskeletal syndrome, X-linked recessive","type":"exact"}],"termid":"MONDO:0010292","xrefs":{"Monarch":{"xref_id":"0010292"}}}


id: PBO:0050823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYDIN axonemal central pair apparatus protein","termid":"PBO:0050823"}


id: PBO:0052540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kallikrein related peptidase 13","termid":"PBO:0052540"}


id: PBO:0031031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_organization","termid":"PBO:0031031"}


id: GO:0048070
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the developmental process that results in the deposition of coloring matter in an organism.","definition_xrefs":["GOC:dph","GOC:tb","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pigmentation","termid":"GO:0120305"},{"relation_name":"regulates","term_name":"developmental pigmentation","termid":"GO:0048066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of developmental pigmentation","synonyms":[{"name":"regulation of pigmentation during development","type":"exact"}],"termid":"GO:0048070"}


id: PBO:0089400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic meiotic pumilio family RNA-binding protein Mpf1","termid":"PBO:0089400"}


id: PBO:0017037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"box H/ACA small nucleolar RNA snR93","termid":"PBO:0017037"}


id: GO:0103100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 6-methylthiohexylhydroximate = H+ + 5-methylthiopentyldesulfoglucosinolate + UDP(3-).","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose: 6-methylthiohexylhydroximate S-glucosyltransferase activity (obsolete GO:0103100)","termid":"GO:0103100"}


id: PBO:0111337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA cleavage and polyadenylation specificity factor complex, symplekin scaffold subunit Pta1","termid":"PBO:0111337"}


id: GO:0099561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a synaptic membrane to the extracellular matrix via adhesion molecules.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"},{"relation_name":"part_of","term_name":"synapse organization","termid":"GO:0050808"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"synaptic membrane adhesion to extracellular matrix","termid":"GO:0099561"}


id: PBO:0055682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipase family member K","termid":"PBO:0055682"}


id: PBO:0069633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 910, pseudogene","termid":"PBO:0069633"}


id: MOD:00895
data:
  {"annotated_genes":["SJAG_01671"],"annotation_feature_type":"gene","cv_annotations":{"PSI-MOD":[{"annotations":[82508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MOD:00226"}]},"cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct with a compound containing a flavin adenine dinucleotide (FAD) group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavin modified residue","termid":"MOD:00697"},{"relation_name":"is_a","term_name":"phosphorus containing modified residue","termid":"MOD:00861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01671":null},"genotype_count":0,"is_obsolete":false,"name":"FAD modified residue","references_by_uniquename":{"PMID:36408920":null},"termid":"MOD:00895","terms_by_termid":{"MOD:00226":null}}


id: PBO:0087156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA helicase in the DEAH-box family; functions in both RNA polymerase I and polymerase II transcript metabolism; catalyzes removal of U2, U5, and U6 snRNPs from the postsplicing lariat-intron ribonucleoprotein complex; required for efficient biogenesis of both small- and large-subunit rRNAs; acts with Sqs1p to promote 20S to 18S rRNA processing catalyzed by endonuclease Nob1p","termid":"PBO:0087156"}


id: MONDO:0008998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cockayne syndrome type III, also known as the mild form of Cockayne syndrome, is a rare genetic disorder that causes early (premature) aging. Unlike the more severe forms of this condition, individuals with Cockayne syndrome type III can have normal growth and development. Symptoms may include sunlight sensitivity (photosensitivity), hearing loss, eye and bone abnormalities, and changes to the brain that can be seen on imaging (brain MRIs). In general, symptoms of Cockayne syndrome type III are usually not noticeable until later in childhood.","direct_ancestors":[{"relation_name":"is_a","term_name":"Cockayne syndrome","termid":"MONDO:0016006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0006025","MONDO:0005066","MONDO:0019303"],"is_obsolete":false,"name":"Cockayne syndrome type 3","secondary_identifiers":["OMIM:216411","icd11.foundation:1401163130","UMLS:C0751037","MEDGEN:196713","Orphanet:90324","GARD:1417"],"synonyms":[{"name":"Cockayne syndrome type 3","type":"exact"},{"name":"Cockayne syndrome type C","type":"related"},{"name":"Cockayne syndrome type III","type":"exact"},{"name":"Cockayne syndrome, type III","type":"related"}],"termid":"MONDO:0008998","xrefs":{"Monarch":{"xref_id":"0008998"}}}


id: GO:0034029
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + ATP + bicarbonate = ADP + 2 H+ + oxalosuccinate + phosphate.","definition_xrefs":["RHEA:20425","EC:6.4.1.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"2-oxoglutarate carboxylase activity","secondary_identifiers":["KEGG_REACTION:R08201","MetaCyc:RXN-8457"],"synonyms":[{"name":"CFI","type":"related"},{"name":"OGC","type":"related"},{"name":"carboxylating factor for ICDH","type":"related"},{"name":"oxalosuccinate synthetase activity","type":"related"}],"termid":"GO:0034029"}


id: GO:1990558
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which malonate(1-) is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["PMID:10428783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malonic acid transmembrane transport","termid":"GO:1901553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"mitochondrial malonate(1-) transmembrane transport","termid":"GO:1990558"}


id: GO:0033142
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a nuclear progesterone receptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor binding","termid":"GO:0016922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"nuclear progesterone receptor binding","synonyms":[{"name":"progesterone receptor binding","type":"broad"}],"termid":"GO:0033142"}


id: GO:0071561
data:
  {"annotated_genes":["SJAG_01329","SJAG_04552","SJAG_01116","SJAG_04221"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79232,108355,109057,117261],"is_not":false,"summary":null,"term":"GO:0071561"}]},"cv_name":"cellular_component","definition":"An organelle membrane contact site formed between the vacuole membrane and the outer nuclear membrane. In S. cerevisiae these contacts are mediated through direct physical interaction between Vac8p and Nvj1p.","definition_xrefs":["GOC:jp","PMID:16806880","PMID:16709156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle membrane contact site","termid":"GO:0044232"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01116":null,"SJAG_01329":null,"SJAG_04221":null,"SJAG_04552":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"nucleus-vacuole junction","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"NV junction","type":"exact"},{"name":"NVJ","type":"exact"},{"name":"nucleus-vacuole membrane contact site","type":"exact"}],"termid":"GO:0071561","terms_by_termid":{"GO:0071561":null}}


id: MOD:00819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-glutamic acid residue to L-2-aminobutanoic acid.","definition_xrefs":["RESID:AA0409","ChEBI:35619","DeltaMass:0","PubMed:11740505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-glutamic acid residue","termid":"MOD:00906"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-aminobutanoic acid (Glu)","synonyms":[{"name":"(S)-2-aminobutanoic acid","type":"exact"},{"name":"Abu","type":"exact"},{"name":"L-2-amino-n-butyric acid","type":"exact"},{"name":"L-2-aminobutanoic acid","type":"exact"},{"name":"L-2-aminobutyric acid","type":"exact"},{"name":"L-alpha-amino-n-butyric acid","type":"exact"},{"name":"L-alpha-aminobutyric acid","type":"exact"},{"name":"L-butyrine","type":"exact"},{"name":"alpha-amino-n-butyric acid","type":"exact"},{"name":"alpha-aminobutyric acid","type":"exact"},{"name":"butyrine","type":"exact"},{"name":"dCbxGlu","type":"exact"}],"termid":"MOD:00819"}


id: PBO:0000556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent diflavin oxidoreductase, involved in iron-sulphur cluster assembly Tah18 (predicted)","termid":"PBO:0000556"}


id: MONDO:0018486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Visual snow syndrome is described as a persistent visual problem characterized by seeing snow-like dots. Migraines are a common symptom. Many people also see drifting blobs of varying size and shape (floaters), visual effects (entopic phenomenon), glare, halos, starbursts, trails, odd colors and shapes, and may have persistent recurrence of a visual image (palinopsia) and double vision. Additional symptoms may include fatigue, tinnitus, or depersonalization and depression. Most people have normal vision tests and normal brain images. Standard migraine treatments are often not helpful. There is no cure or effective treatment to completely relieve the symptoms, but medication seems to help some people with visual snow.","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"visual snow syndrome","secondary_identifiers":["GARD:12062","icd11.foundation:806322116","UMLS:C4324662","NORD:1929","MEDGEN:1661883","Orphanet:420556"],"synonyms":[{"name":"visual snow","type":"related"}],"termid":"MONDO:0018486","xrefs":{"Monarch":{"xref_id":"0018486"}}}


id: PBO:0114671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial dihydrolipoamide S-acetyltransferase (e3 component), Lat1","termid":"PBO:0114671"}


id: GO:0033901
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of poly(A), forming oligoribonucleotides and ultimately 3'-AMP.","definition_xrefs":["EC:3.1.27.8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 3'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0140098","GO:0016788","GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ribonuclease V activity","secondary_identifiers":["MetaCyc:3.1.27.8-RXN"],"synonyms":[{"name":"endoribonuclease V activity","type":"related"}],"termid":"GO:0033901"}


id: PBO:0002650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine kinase Mak1","termid":"PBO:0002650"}


id: PBO:0002958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FEN-1 endonuclease Rad2","termid":"PBO:0002958"}


id: PBO:0113288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Positive regulator of the Gcn2p kinase activity; forms a complex with Gcn20p; proposed to stimulate Gcn2p activation by an uncharged tRNA; suppresses frameshifting at stalled ribosomes","termid":"PBO:0113288"}


id: PBO:0043849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C3b/C4b receptor 1 (Knops blood group)","termid":"PBO:0043849"}


id: GO:1990057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cell cycle regulatory process in which the cell cycle is halted during one of the normal phases (G1, S, G2, M) as a result of DNA damage from environmental insults or errors during metabolism.","definition_xrefs":["PMID:10630641","GOC:rph"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cycle arrest in response to DNA damage stimulus (obsolete GO:1990057)","synonyms":[{"name":"cell cycle arrest in response to DNA damage stimulus","type":"exact"}],"termid":"GO:1990057"}


id: PBO:0067485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 619, pseudogene","termid":"PBO:0067485"}


id: PR:Q7Z995
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.18c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19G7.18c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.18c","synonyms":[{"name":"Spom972h-SPBC19G7.18c","type":"exact"}],"termid":"PR:Q7Z995"}


id: FYPO:0003847
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which conjugation does not occur in cells of the h- mating type.","definition_xrefs":["PomBase:mah","PMID:24727291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterile","termid":"FYPO:0000280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000301"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000301"],"is_obsolete":false,"name":"h- specific sterility","synonyms":[{"name":"h--specific sterility","type":"exact"},{"name":"h-minus-specific mating defect","type":"related"},{"name":"h-minus-specific sterility","type":"exact"}],"termid":"FYPO:0003847"}


id: GO:0001956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of a neurotransmitter.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurotransmitter secretion","termid":"GO:0046928"},{"relation_name":"is_a","term_name":"positive regulation of synaptic transmission","termid":"GO:0050806"},{"relation_name":"is_a","term_name":"positive regulation of neurotransmitter transport","termid":"GO:0051590"},{"relation_name":"is_a","term_name":"positive regulation of secretion by cell","termid":"GO:1903532"},{"relation_name":"positively_regulates","term_name":"neurotransmitter secretion","termid":"GO:0007269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of neurotransmitter secretion","synonyms":[{"name":"activation of neurotransmitter secretion","type":"narrow"},{"name":"stimulation of neurotransmitter secretion","type":"narrow"},{"name":"up regulation of neurotransmitter secretion","type":"exact"},{"name":"up-regulation of neurotransmitter secretion","type":"exact"},{"name":"upregulation of neurotransmitter secretion","type":"exact"}],"termid":"GO:0001956"}


id: GO:0043804
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-formimidoylglycine => H2O + imidazol-4-one.","definition_xrefs":["PMID:27286964","RHEA:24935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016810","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"imidazolone hydrolase activity","termid":"GO:0043804"}


id: GO:0044345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of transferring information from a stromal cell to an epithelial cell where it is received and interpreted, as part of prostate gland development.","definition_xrefs":["GOC:jl","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell signaling","termid":"GO:0007267"},{"relation_name":"is_a","term_name":"cellular process involved in reproduction in multicellular organism","termid":"GO:0022412"},{"relation_name":"part_of","term_name":"prostate gland development","termid":"GO:0030850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"stromal-epithelial cell signaling involved in prostate gland development","synonyms":[{"name":"stromal-epithelial cell signalling involved in prostate gland development","type":"exact"}],"termid":"GO:0044345"}


id: PBO:0003230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kip3 subfamily","termid":"PBO:0003230"}


id: SO:0002359
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a Y RNA.","definition_xrefs":["PMID:6816230","PMID:8836182","PMID:7539809","PMID:7520568","PMID:1698620","PMID:6187471"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ncRNA_gene","termid":"SO:0001263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y_RNA_gene","termid":"SO:0002359"}


id: GO:0043287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a poly(3-hydroxyalkanoate), a polyester of 3-hydroxyacids produced as intracellular granules by a large variety of bacteria.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"poly(3-hydroxyalkanoate) binding","synonyms":[{"name":"PHA binding","type":"exact"}],"termid":"GO:0043287"}


id: PBO:0059408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S34","termid":"PBO:0059408"}


id: GO:0070091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of glucagon from secretory granules in the A (alpha) cells of the pancreas (islets of Langerhans).","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide hormone secretion","termid":"GO:0030072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0023052","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"glucagon secretion","termid":"GO:0070091"}


id: PBO:0060217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MX dynamin like GTPase 1","termid":"PBO:0060217"}


id: FYPO:0007156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the medial cortical nodes is increased in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein localization to medial cortex during vegetative growth","termid":"FYPO:0001677"},{"relation_name":"is_a","term_name":"abnormal protein localization to medial cortical node","termid":"FYPO:0003289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to medial cortical node","synonyms":[{"name":"increased protein localisation to medial cortical node","type":"exact"},{"name":"increased protein localization to cytokinetic nodes","type":"related"},{"name":"increased protein localization to medial cortical node during mitotic cell cycle","type":"related"},{"name":"increased protein localization to medial cortical node during vegetative growth","type":"exact"},{"name":"increased protein recruitment to medial cortical node","type":"related"}],"termid":"FYPO:0007156"}


id: GO:0021749
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ventral cochlear nucleus over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid","GOC:cls","GOC:curators","GO_REF:0000021","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cochlear nucleus development","termid":"GO:0021747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral cochlear nucleus development","termid":"GO:0021749"}


id: PBO:0061077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFKB repressing factor","termid":"PBO:0061077"}


id: SO:0000111
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene encoded within a transposable element. For example gag, int, env and pol are the transposable element genes of the TY element in yeast.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"part_of","term_name":"transposable_element","termid":"SO:0000101"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposable_element_gene","synonyms":[{"name":"transposable element gene","type":"exact"}],"termid":"SO:0000111"}


id: MONDO:0009683
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive limb-girdle muscular dystrophy type 2H (LGMD2H) is a mild subtype of autosomal recessive limb girdle muscular dystrophy characterized by slowly progressive proximal muscle weakness and wasting of the pelvic and shoulder girdles with onset that usually occurs during the second or third decade of life. Clinical presentation is variable and can include calf psuedohypertrophy, joint contractures, scapular winging, muscle cramping and/or facial and respiratory muscle involvement.","definition_xrefs":["Orphanet:1878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive limb-girdle muscular dystrophy","termid":"MONDO:0015152"},{"relation_name":"is_a","term_name":"qualitative or quantitative defects of TRIM32","termid":"MONDO:0016153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005336"],"is_obsolete":false,"name":"autosomal recessive limb-girdle muscular dystrophy type 2H","secondary_identifiers":["UMLS:C0270968","OMIM:254110","SCTID:43226001","GARD:3844","DOID:0110282","ICD9:359.89","MEDGEN:78750","MESH:C535897"],"synonyms":[{"name":"LGMD2H","type":"exact"},{"name":"Sarcotubular myopathy","type":"exact"},{"name":"TRIM32 autosomal recessive limb-girdle muscular dystrophy","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy caused by mutation in TRIM32","type":"exact"},{"name":"autosomal recessive limb-girdle muscular dystrophy type 2H","type":"exact"},{"name":"limb-girdle muscular dystrophy due to TRIM32 deficiency","type":"exact"},{"name":"limb-girdle muscular dystrophy type 2H","type":"related"},{"name":"muscular dystrophy Hutterite type","type":"exact"},{"name":"muscular dystrophy limb-girdle type 2H","type":"related"},{"name":"muscular dystrophy, Hutterite type","type":"related"},{"name":"muscular dystrophy, limb-girdle, autosomal recessive 8","type":"exact"},{"name":"muscular dystrophy, limb-girdle, type 2H","type":"related"},{"name":"sarcotubular myopathy","type":"exact"}],"termid":"MONDO:0009683","xrefs":{"Monarch":{"xref_id":"0009683"}}}


id: GO:1903811
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-asparagine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","PMID:23895341","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine transport","termid":"GO:0006867"},{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-alpha-amino acid transmembrane transport","termid":"GO:1902475"},{"relation_name":"is_a","term_name":"asparagine transmembrane transport","termid":"GO:1903713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0055085","GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"L-asparagine import across plasma membrane","secondary_identifiers":["GO:0090469"],"synonyms":[{"name":"L-asparagine import into cell","type":"exact"},{"name":"asparagine import","type":"broad"}],"termid":"GO:1903811"}


id: GO:0005599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(X) chains; type X collagen triple helices form hexagonal networks (sheets).","definition_xrefs":["PMID:21421911"],"direct_ancestors":[{"relation_name":"is_a","term_name":"network-forming collagen trimer","termid":"GO:0098642"},{"relation_name":"part_of","term_name":"interstitial hexagonal collagen network","termid":"GO:0098646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"collagen type X trimer","termid":"GO:0005599"}


id: PATO:0001130
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001130 ratio value (obsolete PATO:0001130)","termid":"PATO:0001130"}


id: MONDO:0018593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"polyarteritis nodosa","termid":"MONDO:0019170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary polyarteritis nodosa","secondary_identifiers":["MEDGEN:1842954","UMLS:C5680052","Orphanet:439737","GARD:21830"],"synonyms":[{"name":"primary PAN","type":"exact"},{"name":"primary periarteritis nodosa","type":"exact"}],"termid":"MONDO:0018593","xrefs":{"Monarch":{"xref_id":"0018593"}}}


id: PBO:0038833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase with thrombospondin type 1 motif 6","termid":"PBO:0038833"}


id: PBO:0034649
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-globally_decreased_mitotic_recombination","termid":"PBO:0034649"}


id: PBO:0050882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IDI2 antisense RNA 1","termid":"PBO:0050882"}


id: MONDO:0018196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete germ cell tumor of testis (obsolete MONDO:0018196)","termid":"MONDO:0018196","xrefs":{"Monarch":{"xref_id":"0018196"}}}


id: PBO:0052337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA2026","termid":"PBO:0052337"}


id: PBO:0066304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 7","termid":"PBO:0066304"}


id: PBO:0058809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7851","termid":"PBO:0058809"}


id: MONDO:0020050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal trisomy (obsolete MONDO:0020050)","secondary_identifiers":["ICD9:758.5","SCTID:429442006","Orphanet:98130"],"synonyms":[{"name":"autosomal duplication","type":"exact"},{"name":"chromosomal triplication","type":"related"},{"name":"trisomy","type":"broad"}],"termid":"MONDO:0020050","xrefs":{"Monarch":{"xref_id":"0020050"}}}


id: PBO:0049116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 180","termid":"PBO:0049116"}


id: GO:0035013
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the peptide myosuppressin to initiate a change in cell activity.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled peptide receptor activity","termid":"GO:0008528"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"myosuppressin receptor activity","termid":"GO:0035013"}


id: PBO:0114429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N6-Methyl-AMP deaminase","termid":"PBO:0114429"}


id: PBO:0087558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of SEACAT, a subcomplex of the SEA complex; Sea4p, along with Rtc1p and Mtc5p, redundantly inhibit the TORC1 inhibitory role of the Iml1p/SEACIT (Iml1p-Npr2p-Npr3p) subcomplex, a GAP for GTPase Gtr1p (EGOC subunit) in response to amino acid limitation, thereby resulting in activation of TORC1 signaling; SEA is a coatomer-related complex that associates dynamically with the vacuole; contains an N-terminal beta-propeller fold and a C-terminal RING motif","termid":"PBO:0087558"}


id: PBO:0044458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 4 subfamily F member 44, pseudogene","termid":"PBO:0044458"}


id: MONDO:1011608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitamin-K-dependent blood coagulation factors deficiency that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin-K-dependent blood coagulation factors deficiency, non-human animal","termid":"MONDO:1011410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin-K-dependent blood coagulation factors deficiency, dog","secondary_identifiers":["OMIA:001054-9615"],"termid":"MONDO:1011608","xrefs":{"Monarch":{"xref_id":"1011608"}}}


id: FYPO:0006734
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at replication origins begins later than normal.","definition_xrefs":["PMID:22718908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447"],"is_obsolete":false,"name":"delayed onset of protein localization to chromatin at replication origin","synonyms":[{"name":"delayed onset of protein localisation to chromatin at replication origin","type":"exact"},{"name":"delayed onset of protein localization to chromatin at replication origins during mitotic cell cycle","type":"related"},{"name":"delayed onset of protein localization to chromatin at replication origins during vegetative growth","type":"exact"},{"name":"delayed protein localization to chromatin at replication origin","type":"exact"}],"termid":"FYPO:0006734"}


id: GO:0061934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of an adenine biosynthetic process.","definition_xrefs":["PMID:19933844"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleobase metabolic process","termid":"GO:0006141"},{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"adenine biosynthetic process","termid":"GO:0046084"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"regulation of adenine biosynthetic process","termid":"GO:0061934"}


id: PBO:0055558
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2994","termid":"PBO:0055558"}


id: PBO:0081935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zn regulated GTPase metalloprotein activator 1E","termid":"PBO:0081935"}


id: PBO:0116621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARF GTPase 1","termid":"PBO:0116621"}


id: PBO:0066901
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 202","termid":"PBO:0066901"}


id: PBO:0067418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 535, pseudogene","termid":"PBO:0067418"}


id: GO:0070620
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that contains the epidermal growth factor receptor (EGFR), Grb2 and the guanine nucleotide exchange factor Sos (or an ortholog thereof, such as mSos1), and is involved in linking EGFR activation to the p21-Ras pathway.","definition_xrefs":["PMID:8940013","GOC:mah","PMID:7798267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"EGFR-Grb2-Sos complex","synonyms":[{"name":"Egfr-Grb2-mSos1 complex, EGF stimulated","type":"narrow"}],"termid":"GO:0070620"}


id: MONDO:0015686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma that arises from the peritoneum and resembles the malignant surface epithelial-stromal tumors that arise from the ovary. Serous adenocarcinoma is the most common histologic variant. It affects women almost exclusively. The diagnosis of primary peritoneal carcinoma can be made only if both ovaries are not involved by tumor, or, if the ovaries are involved, the tumor is confined to the ovarian surface without invasion of the ovarian stroma and the peritoneal involvement is greater than the ovarian surface involvement.","definition_xrefs":["NCIT:C40022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peritoneal carcinoma","termid":"MONDO:0002113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"primary peritoneal carcinoma","secondary_identifiers":["MEDGEN:269516","UMLS:C1514428","Orphanet:168829","HP:0030406","GARD:20103"],"synonyms":[{"name":"EOPPC","type":"exact"},{"name":"Extra-ovarian primary peritoneal carcinoma","type":"exact"},{"name":"PPC","type":"exact"},{"name":"primary peritoneal cancer","type":"exact"},{"name":"primary peritoneal carcinoma","type":"exact"},{"name":"primary peritoneal carcinoma (disease)","type":"exact"},{"name":"primary peritoneal serous carcinoma","type":"exact"},{"name":"serous surface papillary carcinoma","type":"exact"}],"termid":"MONDO:0015686","xrefs":{"Monarch":{"xref_id":"0015686"}}}


id: MONDO:0030839
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid hormone metabolism, abnormal","termid":"MONDO:0031432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone metabolism, abnormal, 2","secondary_identifiers":["MEDGEN:1812066","UMLS:C5676976","OMIM:619855"],"synonyms":[{"name":"THMA2","type":"exact"},{"name":"thyroid hormone metabolism, abnormal, 2","type":"exact"}],"termid":"MONDO:0030839","xrefs":{"Monarch":{"xref_id":"0030839"}}}


id: PR:O14171
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ditrans,polycis-undecaprenyl-diphosphate synthase ((2E,6E)-farnesyl-diphosphate specific) that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02223","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrodolichyl diphosphate syntase complex subunit SPAC4D7.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.04c","secondary_identifiers":["UniProtKB:O14171"],"synonyms":[{"name":"Spom972h-uppS","type":"exact"},{"name":"ditrans,polycis-polyprenyl diphosphate synthase ((2E,6E)-farnesyl diphosphate specific) (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14171"}


id: MONDO:0017087
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neural tube defect","termid":"MONDO:0018075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"neurenteric cyst","secondary_identifiers":["MEDGEN:14343","GARD:20975","Orphanet:268865","UMLS:C0027806","icd11.foundation:172158971"],"termid":"MONDO:0017087","xrefs":{"Monarch":{"xref_id":"0017087"}}}


id: PBO:0017644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex assembly protein Mba1 (predicted)","termid":"PBO:0017644"}


id: FYPO:0004915
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the sequence of the telomeric repeating unit is normal (i.e. identical to that found in wild type).","definition_xrefs":["PomBase:mah","PMID:18157152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257"],"is_obsolete":false,"name":"normal telomeric repeat sequence","termid":"FYPO:0004915"}


id: GO:1904594
data:
  {"annotated_genes":["SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114020],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904595"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of termination of RNA polymerase II transcription.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:25417108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of termination of DNA-templated transcription","termid":"GO:0031554"},{"relation_name":"regulates","term_name":"termination of RNA polymerase II transcription","termid":"GO:0006369"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03126":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of termination of RNA polymerase II transcription","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of RNA 3'-end formation by RNA polymerase II","type":"exact"},{"name":"regulation of RNA polymerase II transcription termination","type":"exact"},{"name":"regulation of RNA polymerase II transcription termination factor activity","type":"related"},{"name":"regulation of transcription termination from Pol II promoter","type":"exact"},{"name":"regulation of transcription termination from RNA polymerase II promoter","type":"exact"}],"termid":"GO:1904594","terms_by_termid":{"GO:1904595":null}}


id: FYPO:0000545
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein modification is decreased. All modifications may be affected, or only modifications of a certain type, or on specific proteins, or even specific sites within specific proteins.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification during vegetative growth","termid":"FYPO:0000329"},{"relation_name":"is_a","term_name":"decreased protein modification","termid":"FYPO:0002498"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein modification during vegetative growth","synonyms":[{"name":"decreased protein modification during mitotic cell cycle","type":"related"},{"name":"decreased protein/peptide modification during vegetative growth","type":"exact"},{"name":"reduced protein modification during vegetative growth","type":"exact"}],"termid":"FYPO:0000545"}


id: MONDO:0005931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete progressive multifocal leukoencephalopathy (obsolete MONDO:0005931)","termid":"MONDO:0005931","xrefs":{"Monarch":{"xref_id":"0005931"}}}


id: GO:0140064
data:
  {"annotated_genes":["SJAG_02990","SJAG_02773"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93426,100984],"is_not":false,"summary":null,"term":"GO:0140064"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: crotonyl-CoA + lysine in peptide = CoA + N-crotonyl-lysine-peptide.","definition_xrefs":["PMID:25818647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-acyltransferase activity","termid":"GO:0016410"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02773":null,"SJAG_02990":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"peptide crotonyltransferase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["RHEA:53908"],"synonyms":[{"name":"protein crotonyltransferase activity","type":"related"}],"termid":"GO:0140064","terms_by_termid":{"GO:0140064":null}}


id: MONDO:0021529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the chest wall.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of chest wall","termid":"MONDO:0021388"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of chest wall","secondary_identifiers":["ICD9:229.8","NCIT:C8529","SCTID:92058007","MEDGEN:195776","UMLS:C0684831"],"synonyms":[{"name":"benign chest wall neoplasm","type":"exact"},{"name":"benign chest wall tumor","type":"exact"},{"name":"benign chest wall tumour","type":"exact"},{"name":"benign neoplasm of the chest wall","type":"exact"},{"name":"benign tumor of chest wall","type":"exact"},{"name":"benign tumor of the chest wall","type":"exact"},{"name":"benign tumour of chest wall","type":"exact"},{"name":"benign tumour of the chest wall","type":"exact"},{"name":"chest wall benign neoplasm","type":"exact"}],"termid":"MONDO:0021529","xrefs":{"Monarch":{"xref_id":"0021529"}}}


id: MONDO:0000116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cortical dysplasia, complex, with other brain malformations (obsolete MONDO:0000116)","termid":"MONDO:0000116","xrefs":{"Monarch":{"xref_id":"0000116"}}}


id: PBO:0072359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 45","termid":"PBO:0072359"}


id: GO:0075084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of transmembrane receptor-mediated cAMP signal transduction in the symbiont. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075084)","synonyms":[{"name":"modulation by host of symbiont transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075084"}


id: PR:O74498
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FAS-associated factor 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04839","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBX domain-containing protein 10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC285.11","secondary_identifiers":["UniProtKB:O74498"],"synonyms":[{"name":"Spom972h-FAF2","type":"exact"}],"termid":"PR:O74498"}


id: GO:2000097
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of smooth muscle cell-matrix adhesion.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-matrix adhesion","termid":"GO:0001952"},{"relation_name":"regulates","term_name":"smooth muscle cell-matrix adhesion","termid":"GO:0061302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of smooth muscle cell-matrix adhesion","termid":"GO:2000097"}


id: GO:0070115
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers that surround an organellar chromatophore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"organellar chromatophore","termid":"GO:0070111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"organellar chromatophore intermembrane space","synonyms":[{"name":"Paulinella-type chromatophore intermembrane space","type":"exact"}],"termid":"GO:0070115"}


id: MONDO:0019190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Juvenile polyposis of infancy (JPI) is the most severe form of juvenile gastrointestinal polyposis and is characterized by pancolonic hamartomatous polyposis from stomach to rectum, diagnosed in the first two years of life.","definition_xrefs":["Orphanet:79076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juvenile polyposis syndrome","termid":"MONDO:0017380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"juvenile polyposis of infancy","secondary_identifiers":["GARD:16696","MEDGEN:1778573","UMLS:C5445164","icd11.foundation:378686036"],"synonyms":[{"name":"infantile juvenile polyposis syndrome","type":"exact"},{"name":"infantile onset juvenile polyposis syndrome","type":"exact"},{"name":"juvenile polyposis syndrome of infancy","type":"exact"}],"termid":"MONDO:0019190","xrefs":{"Monarch":{"xref_id":"0019190"}}}


id: MONDO:0003112
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor that arises from the stomach. It includes choriocarcinoma and immature teratoma.","definition_xrefs":["NCIT:C5486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric cancer","termid":"MONDO:0001056"},{"relation_name":"is_a","term_name":"extragonadal germ cell cancer","termid":"MONDO:0003113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"malignant gastric germ cell tumor","secondary_identifiers":["MEDGEN:233663","DOID:4716","UMLS:C1334584"],"synonyms":[{"name":"germ cell tumor of the stomach","type":"exact"},{"name":"germ cell tumour of the stomach","type":"exact"},{"name":"malignant gastric germ cell neoplasm","type":"exact"},{"name":"malignant gastric germ cell tumor","type":"exact"},{"name":"malignant germ cell neoplasm of stomach","type":"exact"},{"name":"malignant germ cell neoplasm of the stomach","type":"exact"},{"name":"malignant germ cell tumor of stomach","type":"exact"},{"name":"malignant germ cell tumor of the stomach","type":"exact"},{"name":"malignant germ cell tumour of stomach","type":"exact"},{"name":"malignant germ cell tumour of the stomach","type":"exact"}],"termid":"MONDO:0003112","xrefs":{"Monarch":{"xref_id":"0003112"}}}


id: PBO:0088369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D-arabinono-1,4-lactone oxidase","termid":"PBO:0088369"}


id: PBO:0012595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylamine-glycine ligase/phosphoribosylformylglycinamidine cyclo-ligase","termid":"PBO:0012595"}


id: GO:0140313
data:
  {"annotated_genes":["SJAG_04682","SJAG_02576","SJAG_02474","SJAG_02266","SJAG_01803","SJAG_00436","SJAG_01993","SJAG_04873","SJAG_00642","SJAG_02857","SJAG_00822","SJAG_00145","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003788"},{"annotations":[102511,109453,97239,102562,113774,92222,89642,97177,107029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140311"},{"annotations":[106951],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140610"},{"annotations":[95784,95785],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140486"}]},"cv_name":"molecular_function","definition":"Binding to a specific molecule to prevent it from interacting with other partners or to inhibit its localization to the area of the cell or complex where it is active.","definition_xrefs":["PMID:13130076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00436":null,"SJAG_00642":null,"SJAG_00822":null,"SJAG_01078":null,"SJAG_01803":null,"SJAG_01993":null,"SJAG_02266":null,"SJAG_02474":null,"SJAG_02576":null,"SJAG_02857":null,"SJAG_04682":null,"SJAG_04873":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"molecular sequestering activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-203680","Reactome:R-HSA-203553","Reactome:R-HSA-3245898"],"termid":"GO:0140313","terms_by_termid":{"GO:0003788":null,"GO:0140311":null,"GO:0140486":null,"GO:0140610":null}}


id: PBO:0013012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Prp4 family, Rna4","termid":"PBO:0013012"}


id: PBO:0082328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase of the ATP-binding cassette (ABC) family; involved in 40S and 60S ribosome biogenesis, has similarity to Gcn20p; important for disaggregation of ordered and disordered aggregates; shuttles from nucleus to cytoplasm, physically interacts with Tif6p, Lsg1p; human homolog ABCF2 can complement yeast ARB1 mutant","termid":"PBO:0082328"}


id: MONDO:0975754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"borderline vascular tumor","termid":"MONDO:0971116"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudomyogenic hemangioendothelioma","secondary_identifiers":["UMLS:C3840252","MEDGEN:826097","Orphanet:673556"],"termid":"MONDO:0975754","xrefs":{"Monarch":{"xref_id":"0975754"}}}


id: GO:0005722
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A diffusely banded region of heterochromatin located between euchromatin and alpha-heterochromatin in the polytene chromosome chromocenter; normally replicated during polytenization.","definition_xrefs":["PMID:8878678","PMID:11404334"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericentric heterochromatin","termid":"GO:0005721"},{"relation_name":"part_of","term_name":"polytene chromosome chromocenter","termid":"GO:0005701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005694","GO:0005575"],"is_obsolete":false,"name":"beta-heterochromatin","termid":"GO:0005722"}


id: PR:O13796
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor 25 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22684:SF0","OMA:SCHPO01511","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome quality control complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1142.01","secondary_identifiers":["UniProtKB:O13796"],"synonyms":[{"name":"Spom972h-TCF25","type":"exact"}],"termid":"PR:O13796"}


id: PBO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inhibitor of DNA binding 1","termid":"PBO:0050862"}


id: MONDO:1010199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Muscular dystrophy, Duchenne type that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy, non-human animal","termid":"MONDO:0024965"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscular dystrophy, Duchenne type, non-human animal","secondary_identifiers":["OMIA:001081"],"termid":"MONDO:1010199","xrefs":{"Monarch":{"xref_id":"1010199"}}}


id: PR:Q9HGL6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A brix domain-containing protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02384","PANTHER:PTHR13634:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein brx1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC800.06","secondary_identifiers":["UniProtKB:Q9HGL6"],"synonyms":[{"name":"Spom972h-BRIX1","type":"exact"}],"termid":"PR:Q9HGL6"}


id: PBO:0064743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 79","termid":"PBO:0064743"}


id: PBO:0059947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 33","termid":"PBO:0059947"}


id: GO:0106331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + N-acetyl-4-O-acetylneuraminate = acetate + H+ + N-acetylneuraminate.","definition_xrefs":["PMID:22291594","RHEA:25564"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sialate O-acetylesterase activity","termid":"GO:0001681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016788","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"sialate 4-O-acetylesterase activity","secondary_identifiers":["MetaCyc:RXN-13181"],"termid":"GO:0106331"}


id: PBO:0066671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIPPLY3 pseudogene 1","termid":"PBO:0066671"}


id: PBO:0071826
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 21","termid":"PBO:0071826"}


id: PBO:0029079
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0029079"}


id: PBO:0087450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a complex that associates with actin filaments; forms a complex with Tda2p that inhibits barbed end F-actin assembly; elevates actin monomer pools to increase endocytotic efficiency and to regulate the distribution of actin between cables and patches; Aim21p/Tda2p forms a larger complex with actin capping proteins Cap1p and Cap2p; involved in mitochondrial migration along actin filaments; recruited to cortical actin patches by SH3 domain-containing proteins Bbc1p and Abp1p","termid":"PBO:0087450"}


id: MONDO:1012908
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spontaneous systemic inflammation signs and increased delayed hypersensitivity response that occurs in pigs due to a mutation in the NLRP3 gene created by genetic engineering or gene editing.","definition_xrefs":["PMID:34580110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder, non-human animal","termid":"MONDO:0700106"},{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryopyrin-associated periodic syndrome, NLRP3-related, pig","secondary_identifiers":["OMIA:002464-9823"],"termid":"MONDO:1012908","xrefs":{"Monarch":{"xref_id":"1012908"}}}


id: GO:0010543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate or frequency of platelet activation. Platelet activation is a series of progressive, overlapping events triggered by exposure of the platelets to subendothelial tissue.","definition_xrefs":["GOC:dph","GOC:BHF","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell activation","termid":"GO:0050865"},{"relation_name":"regulates","term_name":"platelet activation","termid":"GO:0030168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of platelet activation","termid":"GO:0010543"}


id: PBO:0048888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A6 family like 7","termid":"PBO:0048888"}


id: GO:0010755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of plasminogen activation. Plasminogen activation is the process in which plasminogen is processed to plasmin.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein processing","termid":"GO:0070613"},{"relation_name":"regulates","term_name":"plasminogen activation","termid":"GO:0031639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0051604"],"is_obsolete":false,"name":"regulation of plasminogen activation","termid":"GO:0010755"}


id: FYPO:0001220
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of protein measured in a cell during a cellular response to a pheromone is higher than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein level","termid":"FYPO:0000836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0006551","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein level during cellular response to pheromone","synonyms":[{"name":"increased protein accumulation during cellular response to pheromone","type":"related"},{"name":"increased protein level during cellular response to pheromone during mitotic cell cycle","type":"related"},{"name":"increased protein level during cellular response to pheromone during vegetative growth","type":"exact"}],"termid":"FYPO:0001220"}


id: MONDO:0006718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cutaneous lesions arising from infection with Treponema pallidum. In the primary stage, 18-21 days following infection, one or more chancres appear. If untreated, the subsequent stages of the disease appear as syphilids. These eruptions are superficial, nondestructive, exanthematic, transient, macular roseolas that may later be maculopapular or papular polymorphous or scaly, pustular, pigmented eruptions.(Arnold, Odom, and James, Andrew's Diseases of the Skin, 8th ed, p409)","definition_xrefs":["MESH:D013591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"},{"relation_name":"is_a","term_name":"skin disease caused by bacterial infection","termid":"MONDO:0024295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"cutaneous syphilis","secondary_identifiers":["MEDGEN:52623","EFO:1000887","UMLS:C0039132"],"synonyms":[{"name":"Treponema pallidum caused skin disease caused by bacterial infection","type":"exact"},{"name":"Treponema pallidum skin disease caused by bacterial infection","type":"exact"}],"termid":"MONDO:0006718","xrefs":{"Monarch":{"xref_id":"0006718"}}}


id: GO:1902109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any negative regulation of mitochondrial membrane permeability that is involved in apoptotic process.","definition_xrefs":["GOC:mtg_apoptosis","GOC:pm","PMID:19168129","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of mitochondrial membrane permeability","termid":"GO:0035795"},{"relation_name":"is_a","term_name":"regulation of mitochondrial membrane permeability involved in apoptotic process","termid":"GO:1902108"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0007005","GO:0006810"],"is_obsolete":false,"name":"negative regulation of mitochondrial membrane permeability involved in apoptotic process","synonyms":[{"name":"mitochondrial membrane impermeability involved in apoptosis","type":"related"},{"name":"mitochondrial membrane impermeability involved in apoptotic cell death","type":"related"},{"name":"mitochondrial membrane impermeability involved in apoptotic process","type":"related"},{"name":"mitochondrial membrane impermeability involved in apoptotic program","type":"related"},{"name":"mitochondrial membrane impermeability involved in apoptotic programmed cell death","type":"related"},{"name":"mitochondrial membrane impermeability involved in programmed cell death by apoptosis","type":"related"},{"name":"mitochondrial membrane impermeability involved in signaling (initiator) caspase activity","type":"related"},{"name":"mitochondrial membrane impermeability involved in type I programmed cell death","type":"related"},{"name":"mitochondrial membrane impermeabilization involved in apoptosis","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in apoptotic cell death","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in apoptotic process","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in apoptotic program","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in apoptotic programmed cell death","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in programmed cell death by apoptosis","type":"narrow"},{"name":"mitochondrial membrane impermeabilization involved in signaling (initiator) caspase activity","type":"related"},{"name":"mitochondrial membrane impermeabilization involved in type I programmed cell death","type":"narrow"},{"name":"negative regulation of mitochondrial membrane permeability involved in apoptosis","type":"narrow"},{"name":"negative regulation of mitochondrial membrane permeability involved in apoptotic cell death","type":"exact"},{"name":"negative regulation of mitochondrial membrane permeability involved in apoptotic program","type":"narrow"},{"name":"negative regulation of mitochondrial membrane permeability involved in apoptotic programmed cell death","type":"exact"},{"name":"negative regulation of mitochondrial membrane permeability involved in programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of mitochondrial membrane permeability involved in signaling (initiator) caspase activity","type":"related"},{"name":"negative regulation of mitochondrial membrane permeability involved in type I programmed cell death","type":"narrow"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptosis","type":"narrow"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptotic cell death","type":"exact"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptotic process","type":"exact"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptotic program","type":"narrow"},{"name":"negative regulation of transport across mitochondrial membrane involved in apoptotic programmed cell death","type":"exact"},{"name":"negative regulation of transport across mitochondrial membrane involved in programmed cell death by apoptosis","type":"exact"},{"name":"negative regulation of transport across mitochondrial membrane involved in signaling (initiator) caspase activity","type":"related"},{"name":"negative regulation of transport across mitochondrial membrane involved in type I programmed cell death","type":"narrow"}],"termid":"GO:1902109"}


id: GO:0010705
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which the 5' to 3' exonucleolytic resection of the DNA at the site of the break to form a 3' single-strand DNA overhang occurs resulting in double strand break formation and repair through a double Holliday junction intermediate.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic DNA double-strand break processing","termid":"GO:0000706"},{"relation_name":"part_of","term_name":"reciprocal meiotic recombination","termid":"GO:0007131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006310"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013","GO:0006310","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"meiotic DNA double-strand break processing involved in reciprocal meiotic recombination","termid":"GO:0010705"}


id: MONDO:0016676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete recurrent infections-inflammatory syndrome due to zinc metabolism disorder syndrome (obsolete MONDO:0016676)","secondary_identifiers":["GARD:17213"],"termid":"MONDO:0016676","xrefs":{"Monarch":{"xref_id":"0016676"}}}


id: MONDO:0011460
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An arrhythmogenic right ventricular dysplasia associated with variation in the region 10p14-p12.","definition_xrefs":["DOID:0110075","PMID:10631146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated arrhythmogenic right ventricular dysplasia","termid":"MONDO:0016342"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"arrhythmogenic right ventricular dysplasia 6","secondary_identifiers":["MEDGEN:346892","MESH:C565775","OMIM:604401","UMLS:C1858378"],"synonyms":[{"name":"ARVC6","type":"exact"},{"name":"ARVD6","type":"exact"},{"name":"arrhythmogenic right ventricular cardiomyopathy 6","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia type 6","type":"exact"},{"name":"arrhythmogenic right ventricular dysplasia, familial, 6","type":"related"},{"name":"familial arrhythmogenic right ventricular dysplasia 6","type":"exact"}],"termid":"MONDO:0011460","xrefs":{"Monarch":{"xref_id":"0011460"}}}


id: GO:0051549
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of keratinocyte migration.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of epithelial cell migration","termid":"GO:0010634"},{"relation_name":"is_a","term_name":"regulation of keratinocyte migration","termid":"GO:0051547"},{"relation_name":"positively_regulates","term_name":"keratinocyte migration","termid":"GO:0051546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of keratinocyte migration","synonyms":[{"name":"activation of keratinocyte migration","type":"narrow"},{"name":"stimulation of keratinocyte migration","type":"narrow"},{"name":"up regulation of keratinocyte migration","type":"exact"},{"name":"up-regulation of keratinocyte migration","type":"exact"},{"name":"upregulation of keratinocyte migration","type":"exact"}],"termid":"GO:0051549"}


id: MONDO:0016468
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aform of botulism (see this term), a rare acquired neuromuscular junction disease, characterized by descending flaccid paralysis caused by botulinum neurotoxins (BoNTs), produced in vivo leading to toxin-mediated infection. Infectious botulism includes wound botulism and intestinal toxemia botulism (infant botulism and adult intestinal botulism).","definition_xrefs":["Orphanet:230800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"botulism","termid":"MONDO:0005498"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"toxin-mediated infectious botulism","secondary_identifiers":["MEDGEN:1842703","UMLS:C5679843","GARD:20597","icd11.foundation:1373611689"],"synonyms":[{"name":"toxin-mediated infective botulism","type":"exact"}],"termid":"MONDO:0016468","xrefs":{"Monarch":{"xref_id":"0016468"}}}


id: GO:0005995
data:
  {"annotated_genes":["SJAG_02949"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69836],"is_not":false,"summary":null,"term":"GO:0005995"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of melibiose, the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide catabolic process","termid":"GO:0046352"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02949":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"melibiose catabolic process","references_by_uniquename":{"GO_REF:0000117":null},"synonyms":[{"name":"melibiose breakdown","type":"exact"},{"name":"melibiose catabolism","type":"exact"},{"name":"melibiose degradation","type":"exact"}],"termid":"GO:0005995","terms_by_termid":{"GO:0005995":null}}


id: GO:1903091
data:
  {"annotated_genes":["SJAG_03652","SJAG_02962","SJAG_02152","SJAG_03808"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92148,92149,119535,120833],"is_not":false,"summary":null,"term":"GO:1903091"}]},"cv_name":"biological_process","definition":"The process in which pyridoxamine is transported across a membrane.","definition_xrefs":["GOC:TermGenie","GO_REF:0000069","PMID:15701794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxamine transport","termid":"GO:0031922"},{"relation_name":"is_a","term_name":"vitamin transmembrane transport","termid":"GO:0035461"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02152":null,"SJAG_02962":null,"SJAG_03652":null,"SJAG_03808":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"pyridoxamine transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903091","terms_by_termid":{"GO:1903091":null}}


id: PBO:0040609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bromo adjacent homology domain containing 1","termid":"PBO:0040609"}


id: PBO:0089980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ protein Xdj1","termid":"PBO:0089980"}


id: GO:1905274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of modification of postsynaptic actin cytoskeleton.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:21068295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of modification of postsynaptic structure","termid":"GO:0099159"},{"relation_name":"regulates","term_name":"modification of postsynaptic actin cytoskeleton","termid":"GO:0098885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of modification of postsynaptic actin cytoskeleton","synonyms":[{"name":"regulation of postsynaptic actin cytoskeleton remodelling","type":"exact"}],"termid":"GO:1905274"}


id: FYPO:0007038
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to mitochondrion","synonyms":[{"name":"decreased protein localisation to mitochondrion","type":"exact"},{"name":"decreased protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to mitochondrion during vegetative growth","type":"exact"},{"name":"reduced protein localization to mitochondrion","type":"exact"}],"termid":"FYPO:0007038"}


id: PBO:0046877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 8 member A2, pseudogene","termid":"PBO:0046877"}


id: PBO:0061713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 8","termid":"PBO:0061713"}


id: GO:1905145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an acetylcholine stimulus.","definition_xrefs":["PMID:21238497","GO_REF:0000071","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"},{"relation_name":"is_a","term_name":"response to acetylcholine","termid":"GO:1905144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to acetylcholine","termid":"GO:1905145"}


id: RO:0002355
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a process and an anatomical entity such that the process contributes to the act of creating the structural organization of the anatomical entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"},{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_structural_organization_of","termid":"RO:0002355"}


id: PBO:0005870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide Mc","termid":"PBO:0005870"}


id: FYPO:0005867
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 at ribosomal DNA occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000876"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H3-K9 dimethylation at rDNA during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 dimethylation at rDNA during mitotic cell cycle","type":"related"},{"name":"decreased histone H3-K9 dimethylation at ribosomal DNA during vegetative growth","type":"exact"},{"name":"decreased histone H3K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"decreased histone H3K9me2 at rDNA during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 dimethylation at rDNA during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 dimethylation at rDNA during vegetative growth","type":"exact"}],"termid":"FYPO:0005867"}


id: GO:0034753
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An aryl hydrocarbon receptor (AhR) complex found in the nucleus; ; consists of ligand-bound AhR and the aryl hydrocarbon receptor nuclear translocator (ARNT).","definition_xrefs":["PMID:7598497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aryl hydrocarbon receptor complex","termid":"GO:0034751"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"nuclear aryl hydrocarbon receptor complex","synonyms":[{"name":"6S-nuclear aryl hydrocarbon (Ah) receptor ligand-activated complex","type":"related"},{"name":"nuclear AHRC","type":"exact"},{"name":"nuclear AhR complex","type":"exact"}],"termid":"GO:0034753"}


id: GO:0010912
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the activity of an isomerase. An isomerase catalyzes the geometric or structural changes within one molecule. Isomerase is the systematic name for any enzyme of EC class 5.","definition_xrefs":["GOC:dph","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of isomerase activity (obsolete GO:0010912)","termid":"GO:0010912"}


id: GO:1900979
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tatiopterin metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phosphorus metabolic process","termid":"GO:0010562"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of tatiopterin metabolic process","termid":"GO:1900977"},{"relation_name":"positively_regulates","term_name":"tatiopterin metabolic process","termid":"GO:1900869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tatiopterin metabolic process","synonyms":[{"name":"activation of tatiopterin metabolic process","type":"narrow"},{"name":"activation of tatiopterin metabolism","type":"exact"},{"name":"positive regulation of tatiopterin metabolism","type":"exact"},{"name":"up regulation of tatiopterin metabolic process","type":"exact"},{"name":"up regulation of tatiopterin metabolism","type":"exact"},{"name":"up-regulation of tatiopterin metabolic process","type":"exact"},{"name":"up-regulation of tatiopterin metabolism","type":"exact"},{"name":"upregulation of tatiopterin metabolic process","type":"exact"},{"name":"upregulation of tatiopterin metabolism","type":"exact"}],"termid":"GO:1900979"}


id: PBO:0031561
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding","termid":"PBO:0031561"}


id: MONDO:0015423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Anaplastic thyroid carcinoma may represent the ultimate dedifferentiation step of thyroid tumorigenesis and is one of the most severe cancers in humans.","definition_xrefs":["Orphanet:142"],"gene_count":0,"genotype_count":0,"name":"obsolete anaplastic thyroid carcinoma (obsolete MONDO:0015423)","termid":"MONDO:0015423","xrefs":{"Monarch":{"xref_id":"0015423"}}}


id: PBO:0049714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 2","termid":"PBO:0049714"}


id: GO:2000801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endocardial cushion to mesenchymal transition involved in heart valve formation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of endocardial cushion to mesenchymal transition","termid":"GO:0140050"},{"relation_name":"is_a","term_name":"regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:2000800"},{"relation_name":"negatively_regulates","term_name":"endocardial cushion to mesenchymal transition involved in heart valve formation","termid":"GO:0003199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endocardial cushion to mesenchymal transition involved in heart valve formation","synonyms":[{"name":"negative regulation of endocardial cushion to mesenchymal transition involved in valve formation","type":"exact"}],"termid":"GO:2000801"}


id: PBO:0052217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium sodium-activated channel subfamily T member 1","termid":"PBO:0052217"}


id: GO:0050872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a white adipocyte, an animal connective tissue cell involved in energy storage. White adipocytes have cytoplasmic lipids arranged in a unique vacuole.","definition_xrefs":["PMID:12508945"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"white fat cell differentiation","secondary_identifiers":["Reactome:R-HSA-381340"],"synonyms":[{"name":"white adipocyte cell differentiation","type":"exact"},{"name":"white adipocyte differentiation","type":"exact"}],"termid":"GO:0050872"}


id: PR:Q9Y7P6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug72 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7P6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 72 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.02","synonyms":[{"name":"Spom972h-mug72","type":"exact"}],"termid":"PR:Q9Y7P6"}


id: PBO:0004335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall biosynthesis/ cell cycle regulator (predicted)","termid":"PBO:0004335"}


id: FYPO:0001377
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell during a cellular response to salt stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular calcium level","termid":"FYPO:0001197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular calcium level during cellular response to salt stress","synonyms":[{"name":"decreased calcium accumulation during cellular response to salt stress","type":"related"},{"name":"decreased cellular calcium ion level during cellular response to salt stress","type":"exact"},{"name":"decreased cellular calcium level during cellular response to salt stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during cellular response to salt stress during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level during cellular response to salt stress","type":"exact"}],"termid":"FYPO:0001377"}


id: GO:0140145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of copper ions out of the vacuole across the vacuolar membrane.","definition_xrefs":["PMID:12244050","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"copper ion transmembrane transport","termid":"GO:0035434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"copper ion export from vacuole","termid":"GO:0140145"}


id: GO:0003308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of the target cell, resulting a change in cell state that contributes to the progression of the heart over time.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Wnt signaling pathway involved in heart development","termid":"GO:0003307"},{"relation_name":"is_a","term_name":"negative regulation of Wnt signaling pathway","termid":"GO:0030178"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"negatively_regulates","term_name":"Wnt signaling pathway involved in heart development","termid":"GO:0003306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of Wnt signaling pathway involved in heart development","synonyms":[{"name":"negative regulation of Wnt receptor signaling pathway involved in heart development","type":"exact"},{"name":"negative regulation of Wnt receptor signalling pathway involved in heart development","type":"exact"},{"name":"negative regulation of Wnt-activated signaling pathway involved in heart development","type":"exact"}],"termid":"GO:0003308"}


id: PBO:0048053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ferritin heavy chain 1 pseudogene 2","termid":"PBO:0048053"}


id: MONDO:0004837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-metastasizing encapsulated neoplasm arising from nerves in the esophagus. Morphologically, it is characterized by the presence of fibroblasts and Schwann cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibroma","termid":"MONDO:0016755"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"neurofibroma of the esophagus","secondary_identifiers":["MEDGEN:232164","DOID:961","NCIT:C5704","UMLS:C1333463"],"synonyms":[{"name":"esophageal neurofibroma","type":"exact"},{"name":"esophagus neurofibroma","type":"exact"},{"name":"neurofibroma of esophagus","type":"exact"},{"name":"neurofibroma of oesophagus","type":"exact"},{"name":"neurofibroma of the esophagus","type":"exact"},{"name":"oesophagus neurofibroma","type":"exact"}],"termid":"MONDO:0004837","xrefs":{"Monarch":{"xref_id":"0004837"}}}


id: PBO:0028426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_sodium_fluoride","termid":"PBO:0028426"}


id: GO:0097133
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin D3 and cyclin-dependent kinase 6 (CDK6). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"cyclin D3-CDK6 complex","termid":"GO:0097133"}


id: PBO:0077834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TP73 antisense RNA 2","termid":"PBO:0077834"}


id: FYPO:0003174
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleotide-excision repair is normal (i.e. indistinguishable from wild type) during a cellular response to ultraviolet light. Nucleotide-excision repair is a DNA repair process in which a small region of the strand surrounding the damage is removed as an oligonucleotide, and the resulting small gap is filled in by the sequential action of DNA polymerase and DNA ligase.","definition_xrefs":["GO:0006289","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal DNA repair","termid":"FYPO:0006569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000298","FYPO:0000257"],"is_obsolete":false,"name":"normal nucleotide-excision repair during cellular response to UV","synonyms":[{"name":"normal NER during cellular response to UV","type":"exact"},{"name":"normal excision repair during cellular response to UV","type":"broad"},{"name":"normal nucleotide-excision repair during cellular response to UV during mitotic cell cycle","type":"related"},{"name":"normal nucleotide-excision repair during cellular response to UV during vegetative growth","type":"exact"},{"name":"normal nucleotide-excision repair during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0003174"}


id: GO:0032352
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving any hormone.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of hormone metabolic process","termid":"GO:0032350"},{"relation_name":"positively_regulates","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of hormone metabolic process","synonyms":[{"name":"activation of hormone metabolic process","type":"narrow"},{"name":"positive regulation of hormone metabolism","type":"exact"},{"name":"stimulation of hormone metabolic process","type":"narrow"},{"name":"up regulation of hormone metabolic process","type":"exact"},{"name":"up-regulation of hormone metabolic process","type":"exact"},{"name":"upregulation of hormone metabolic process","type":"exact"}],"termid":"GO:0032352"}


id: GO:0033730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arogenate + NADP+ = L-tyrosine + NADPH + CO2.","definition_xrefs":["EC:1.3.1.78"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arogenate dehydrogenase [NAD(P)+] activity","termid":"GO:0033731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"arogenate dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:RXN-5682","RHEA:15417"],"synonyms":[{"name":"L-arogenate:NADP+ oxidoreductase (decarboxylating) activity","type":"related"},{"name":"TyrAAT1","type":"related"},{"name":"TyrAAT2","type":"related"},{"name":"TyrAa","type":"related"},{"name":"arogenic dehydrogenase activity","type":"broad"},{"name":"pretyrosine dehydrogenase activity","type":"broad"}],"termid":"GO:0033730"}


id: PBO:0077004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 6","termid":"PBO:0077004"}


id: PBO:0051617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin like domain containing receptor 2","termid":"PBO:0051617"}


id: GO:0004987
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an opioid to initiate a change in cell activity, with the pharmacological characteristics of kappa-opioid receptors, including high affinity for dynorphins.","definition_xrefs":["IUPHAR_RECEPTOR:318"],"gene_count":0,"genotype_count":0,"name":"obsolete kappa-opioid receptor activity (obsolete GO:0004987)","secondary_identifiers":["Wikipedia:Kappa_Opioid_receptor"],"synonyms":[{"name":"kappa-opioid receptor activity","type":"exact"}],"termid":"GO:0004987"}


id: MONDO:0012781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"celiac disease","termid":"MONDO:0005130"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"celiac disease, susceptibility to, 12","secondary_identifiers":["MEDGEN:436989","OMIM:612010","UMLS:C2677602"],"synonyms":[{"name":"CELIAC12","type":"exact"},{"name":"celiac disease, susceptibility to, 12","type":"exact"},{"name":"gluten-sensitive enteropathy, susceptibility to, 12","type":"related"}],"termid":"MONDO:0012781","xrefs":{"Monarch":{"xref_id":"0012781"}}}


id: GO:0099150
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of postsynaptic specialization assembly, the aggregation, arrangement and bonding together of a set of components to form a postsynaptic specialization.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"postsynaptic specialization assembly","termid":"GO:0098698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of postsynaptic specialization assembly","termid":"GO:0099150"}


id: PBO:0038860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAMTS like 5","termid":"PBO:0038860"}


id: GO:0003161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the cardiac conduction system over time, from its formation to the mature structure. The cardiac conduction system consists of specialized cardiomyocytes that regulate the frequency of heart beat.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac muscle tissue development","termid":"GO:0048738"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac conduction system development","synonyms":[{"name":"cardiac impulse conducting system development","type":"exact"},{"name":"heart conduction system development","type":"exact"}],"termid":"GO:0003161"}


id: PBO:0086659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; homozygous diploid deletion strain exhibits low budding index; physically interacts with Hsp82p; YPL257W is not an essential gene","termid":"PBO:0086659"}


id: GO:0044788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a host organism alters or subverts a biological process being mediated by a virus with which it is infected.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host-mediated perturbation of symbiont process","termid":"GO:0051851"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"host-mediated perturbation of viral process","synonyms":[{"name":"modulation by host of viral process","type":"exact"}],"termid":"GO:0044788"}


id: PBO:0071771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P2 pseudogene 4","termid":"PBO:0071771"}


id: SO:0002396
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A decrease in polypeptide (i.e. protein) expression, as a consequence of a variant in the gene.","definition_xrefs":["PMID:33473208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased_translational_product_level","termid":"SO:0001555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased_polypeptide_level","synonyms":[{"name":"decreased popypeptide level","type":"exact"},{"name":"reduced protein expression","type":"exact"},{"name":"reduced protein level","type":"exact"}],"termid":"SO:0002396"}


id: MONDO:0026160
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic dermis disorder (obsolete MONDO:0026160)","secondary_identifiers":["Orphanet:183472"],"termid":"MONDO:0026160","xrefs":{"Monarch":{"xref_id":"0026160"}}}


id: PBO:0027146
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_farnesyltranstransferase_activity","termid":"PBO:0027146"}


id: PBO:0002484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp108","termid":"PBO:0002484"}


id: PBO:0005860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylglycinamide formyltransferase (predicted)","termid":"PBO:0005860"}


id: PBO:0046568
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group K member 10","termid":"PBO:0046568"}


id: MONDO:0025149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A transmissible spongiform encephalopathy of cattle associated with abnormal prion proteins in the brain. Affected animals develop excitability and salivation followed by ataxia. This disorder has been associated with consumption of scrapie infected ruminant derived protein. This condition may be transmitted to humans, where it is referred to as variant or new variant creutzfeldt-jakob syndrome. (Vet Rec 1998 Jul 25;143(41):101-5)","definition_xrefs":["MESH:D016643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"prion disease, non-human animal","termid":"MONDO:0700108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"encephalopathy, bovine spongiform","synonyms":[{"name":"BSE (bovine spongiform encephalopathy)","type":"exact"},{"name":"BSEs (bovine spongiform encephalopathy)","type":"exact"},{"name":"Mad cow disease","type":"related"},{"name":"Mad cow diseases","type":"related"},{"name":"bovine spongiform encephalitis","type":"exact"},{"name":"bovine spongiform encephalopathy","type":"exact"},{"name":"encephalitis, bovine spongiform","type":"exact"},{"name":"spongiform encephalopathy, bovine","type":"exact"}],"termid":"MONDO:0025149","xrefs":{"Monarch":{"xref_id":"0025149"}}}


id: PBO:0049740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemoglobin subunit delta","termid":"PBO:0049740"}


id: GO:1903875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to corticosterone.","definition_xrefs":["GOC:mr","GO_REF:0000067","GOC:TermGenie","PMID:10802282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"},{"relation_name":"is_a","term_name":"steroid hormone binding","termid":"GO:1990239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0003674","GO:0008289","GO:0005488"],"is_obsolete":false,"name":"corticosterone binding","termid":"GO:1903875"}


id: MONDO:0004599
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A substance abuse that involves the recurring use of barbiturate drugs despite negative consequences.","definition_xrefs":["DOID:8519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"barbiturate abuse","secondary_identifiers":["ICD9:305.43","MEDGEN:572718","UMLS:C0338700","SCTID:231462006"],"termid":"MONDO:0004599","xrefs":{"Monarch":{"xref_id":"0004599"}}}


id: PBO:0027663
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_heterochromatin_maintenance","termid":"PBO:0027663"}


id: PATO:0002074
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An avidity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"avidity","termid":"PATO:0002073"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased avidity","termid":"PATO:0002074"}


id: PBO:0000256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protoporphyrinogen oxidase (predicted)","termid":"PBO:0000256"}


id: PBO:0055471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2904","termid":"PBO:0055471"}


id: GO:0033219
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to urea, a water-soluble carboxamide with the structure H2N-CO-NH2.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"small molecule binding","termid":"GO:0036094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"urea binding","termid":"GO:0033219"}


id: PBO:0043797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic polyadenylated homeobox like 2","termid":"PBO:0043797"}


id: PBO:0074013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 6 pseudogene 4","termid":"PBO:0074013"}


id: PBO:0074506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear RNA activating complex polypeptide 5","termid":"PBO:0074506"}


id: PBO:0062493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 9 pseudogene","termid":"PBO:0062493"}


id: GO:0060415
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of muscle tissue are generated and organized. Muscle tissue consists of a set of cells that are part of an organ and carry out a contractive function.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"muscle organ morphogenesis","termid":"GO:0048644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle tissue morphogenesis","termid":"GO:0060415"}


id: MONDO:0013299
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 6","termid":"MONDO:0016905"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 6q11-q14 deletion syndrome","secondary_identifiers":["OMIM:613544","MEDGEN:462140","UMLS:C3150790","DOID:0060423"],"synonyms":[{"name":"chromosome 6Q13-q14 deletion syndrome","type":"related"},{"name":"chromosome 6q11-q14 deletion syndrome","type":"exact"},{"name":"chromosome 6q11-q14 deletion syndrome, isolated cases","type":"exact"}],"termid":"MONDO:0013299","xrefs":{"Monarch":{"xref_id":"0013299"}}}


id: MONDO:0014800
data:
  {"annotated_genes":["SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87772],"is_not":false,"summary":null,"term":"MONDO:0014800"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"alpha-actinopathy","termid":"MONDO:0100084"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"progressive scapulohumeroperoneal distal myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:905125","OMIM:616852","Orphanet:447977","UMLS:C4225181","GARD:17779"],"synonyms":[{"name":"SHPM","type":"related"},{"name":"myopathy, scapulohumeroperoneal","type":"exact"}],"termid":"MONDO:0014800","terms_by_termid":{"MONDO:0014800":null},"xrefs":{"Monarch":{"xref_id":"0014800"}}}


id: MONDO:0007742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxytryptamine oxygenase regulator","secondary_identifiers":["OMIM:143460","UMLS:C3887951","MEDGEN:854659"],"synonyms":[{"name":"5-HYDROXYTRYPTAMINE oxygenase regulator","type":"related"},{"name":"5-hydroxytryptamine oxygenase regulator","type":"exact"},{"name":"HTOR","type":"related"}],"termid":"MONDO:0007742","xrefs":{"Monarch":{"xref_id":"0007742"}}}


id: PBO:0066590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras homolog family member D","termid":"PBO:0066590"}


id: GO:0140812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: orotate(out) + anion (in) = orotate (in) + anion (out).","definition_xrefs":["PMID:21350910","PMID:35144162"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic anion transmembrane transporter activity","termid":"GO:0008509"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"secondary active monocarboxylate transmembrane transporter activity","termid":"GO:0015355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"orotate:monoatomic anion antiporter activity","synonyms":[{"name":"orotate:anion antiporter activity","type":"broad"},{"name":"orotate:organic anion antiporter activity","type":"narrow"}],"termid":"GO:0140812"}


id: PBO:0049547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 10","termid":"PBO:0049547"}


id: MONDO:0013816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete palmoplantar keratoderma, mutilating, with periorificial keratotic plaques (obsolete MONDO:0013816)","termid":"MONDO:0013816","xrefs":{"Monarch":{"xref_id":"0013816"}}}


id: PBO:0045191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJB6 pseudogene 4","termid":"PBO:0045191"}


id: MONDO:0700116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A brain disorder caused by biallelic variants in NDE1 that is characterized by extreme microcephaly (typically head circumference of more than 10 standard deviations (SD) below the mean), profound motor and intellectual disability, spasticity, and incomplete cerebral formation. Radiologic studies demonstrate overt microcephaly with cortical dysgenesis ranging from simplification to pachygyria/lissencephaly to hydranencephaly. Agenesis of the corpus callosum as well as hypoplasia of the brainstem and cerebellum are typically present.","definition_xrefs":["PMID:22526350","PMID:21529751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly","termid":"MONDO:0001149"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116","xrefs":{"Monarch":{"xref_id":"0700116"}}}


id: PBO:0028516
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_oxidation_during_cellular_response_to_hydrogen_peroxide","termid":"PBO:0028516"}


id: GO:0061185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of the progression of the dermatome over time, from its initial formation to the mature structure. The dermatome is the portion of a somite that will form skin.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of embryonic development","termid":"GO:0045992"},{"relation_name":"is_a","term_name":"regulation of dermatome development","termid":"GO:0061183"},{"relation_name":"negatively_regulates","term_name":"dermatome development","termid":"GO:0061054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dermatome development","termid":"GO:0061185"}


id: GO:0052721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of apurinic/apyrimidinic (AP) endodeoxyribonuclease activity, the hydrolysis of ester linkages immediately 5' to an AP (also called abasic) site within a deoxyribonucleic acid molecule by creating internal breaks, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.","definition_xrefs":["PMID:19401441"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of apurinic/apyrimidinic endodeoxyribonuclease activity (obsolete GO:0052721)","synonyms":[{"name":"regulation of AP endodeoxyribonuclease activity","type":"exact"},{"name":"regulation of abasic endodeoxyribonuclease activity","type":"exact"},{"name":"regulation of apurinic endodeoxyribonuclease activity","type":"narrow"},{"name":"regulation of apyrimidinic endodeoxyribonuclease activity","type":"narrow"}],"termid":"GO:0052721"}


id: GO:0047491
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: polysaccharides containing a terminal alpha-L-guluronate group = oligosaccharides with 4-deoxy-alpha-L-erythro-hex-4-enuronosyl end. This reaction is the eliminative cleavage of polysaccharides containing a terminal a-L-guluronate group, to give oligopolysaccharides with 4-deoxy-a-L-erythro-hex-4-enuronosyl groups at their nonreducing ends.","definition_xrefs":["EC:4.2.2.11"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity, acting on polysaccharides","termid":"GO:0016837"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"poly(alpha-L-guluronate) lyase activity","secondary_identifiers":["MetaCyc:4.2.2.11-RXN"],"synonyms":[{"name":"L-guluronan lyase activity","type":"related"},{"name":"L-guluronate lyase activity","type":"related"},{"name":"alginase II activity","type":"related"},{"name":"guluronate lyase activity","type":"related"},{"name":"poly(alpha-L-1,4-guluronide) exo-lyase activity","type":"related"},{"name":"poly-alpha-L-guluronate lyase activity","type":"related"},{"name":"polyguluronate-specific alginate lyase activity","type":"related"}],"termid":"GO:0047491"}


id: PBO:0052491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 5","termid":"PBO:0052491"}


id: PBO:0060082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 29","termid":"PBO:0060082"}


id: GO:0002655
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction dependent upon immune response","termid":"GO:0002652"},{"relation_name":"regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"}


id: SO:0000063
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An interchromosomal transposition whereby a translocation in which one of the four broken ends loses a segment before re-joining.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_transposition","termid":"SO:1000155"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deficient_interchromosomal_transposition","synonyms":[{"name":"deficient interchromosomal transposition","type":"exact"}],"termid":"SO:0000063"}


id: GO:0033533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving verbascose, the pentasaccharide beta-D-fructofuranosyl alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-galactopyranosyl-(1->6)-alpha-D-glucopyranoside.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide metabolic process","termid":"GO:0009311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"verbascose metabolic process","synonyms":[{"name":"verbascose metabolism","type":"exact"}],"termid":"GO:0033533"}


id: GO:0045879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of smoothened signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of smoothened signaling pathway","termid":"GO:0008589"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"smoothened signaling pathway","termid":"GO:0007224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of smoothened signaling pathway","secondary_identifiers":["GO:0045877"],"synonyms":[{"name":"down regulation of smoothened signaling pathway","type":"exact"},{"name":"down-regulation of smoothened signaling pathway","type":"exact"},{"name":"downregulation of smoothened signaling pathway","type":"exact"},{"name":"inhibition of smoothened signaling pathway","type":"narrow"},{"name":"negative regulation of hedgehog signaling pathway","type":"exact"},{"name":"negative regulation of hh signaling pathway","type":"exact"},{"name":"negative regulation of smoothened activity","type":"related"},{"name":"negative regulation of smoothened by patched","type":"narrow"},{"name":"negative regulation of smoothened receptor activity by patched","type":"related"},{"name":"negative regulation of smoothened signalling pathway","type":"exact"}],"termid":"GO:0045879"}


id: PBO:0049368
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF2I repeat domain containing 2B","termid":"PBO:0049368"}


id: PATO:0002013
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of whether the bearer forms a bundle of anatomical fibers, as of muscle or nerve.","definition_xrefs":["answers.com:http://www.answers.com/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fasciculation","termid":"PATO:0002013"}


id: GO:2000752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucosylceramide catabolic process.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amide metabolic process","termid":"GO:0034248"},{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of membrane lipid metabolic process","termid":"GO:1905038"},{"relation_name":"regulates","term_name":"glucosylceramide catabolic process","termid":"GO:0006680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of glucosylceramide catabolic process","synonyms":[{"name":"regulation of glucosylceramide breakdown","type":"exact"},{"name":"regulation of glucosylceramide catabolism","type":"exact"},{"name":"regulation of glucosylceramide degradation","type":"exact"}],"termid":"GO:2000752"}


id: GO:0022821
data:
  {"annotated_genes":["SJAG_04616"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81990],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015386"}]},"cv_name":"molecular_function","definition":"Catalysis of the active transport of a potassium ion across a membrane by a mechanism whereby two or more species are transported in opposite directions in a tightly coupled process not directly linked to a form of energy other than chemiosmotic energy.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"metal cation:monoatomic cation antiporter activity","termid":"GO:0140828"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"solute:potassium antiporter activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"potassium ion antiporter activity","type":"exact"}],"termid":"GO:0022821","terms_by_termid":{"GO:0015386":null}}


id: GO:0102356
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-trans,6-trans-farnesyl diphosphate(3-) = diphosphoric acid + (+)-isoitalicene.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete isoitalicene synthase activity (obsolete GO:0102356)","termid":"GO:0102356"}


id: MONDO:0004316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A histologic variant of squamous cell carcinoma that arises from the skin. It is characterized by loosening of the intercellular bridges between the malignant cells which results in acantholysis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"acantholytic squamous cell skin carcinoma","secondary_identifiers":["DOID:7643","NCIT:C4460","MEDGEN:91065","SCTID:254654004","UMLS:C0345979"],"synonyms":[{"name":"acantholytic squamous cell carcinoma of skin","type":"related"},{"name":"acantholytic squamous cell carcinoma of the skin","type":"exact"},{"name":"acantholytic squamous cell skin carcinoma","type":"exact"}],"termid":"MONDO:0004316","xrefs":{"Monarch":{"xref_id":"0004316"}}}


id: PBO:0054060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1404","termid":"PBO:0054060"}


id: MONDO:0018360
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A self-limited skin rash that appears in the neonatal period and usually resolves in four to six months after birth. It is caused by placental transfer of maternal autoantibodies, usually anti-Ro antibody. In a minority of cases, it is associated with congenital heart block, hepatitis, or thrombocytopenia. The mothers of the affected babies may be asymptomatic or suffer from systemic lupus erythematosus, Sjogren's syndrome, or rheumatoid arthritis.","definition_xrefs":["NCIT:C99236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"systemic lupus erythematosus","termid":"MONDO:0007915"},{"relation_name":"is_a","term_name":"secondary neonatal autoimmune disease","termid":"MONDO:0018356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"neonatal lupus erythematosus","secondary_identifiers":["NORD:1495","Orphanet:398124","MESH:C536397","EFO:0004537","GARD:21647","MEDGEN:98372","SCTID:95609003","UMLS:C0409979","icd11.foundation:213855225"],"synonyms":[{"name":"Neonatal Lupus","type":"exact"},{"name":"congenital lupus","type":"related"},{"name":"congenital lupus erythematosus","type":"related"},{"name":"neonatal SLE","type":"related"},{"name":"neonatal lupus","type":"related"},{"name":"neonatal lupus syndrome","type":"related"},{"name":"neonatal systemic lupus erythematosus","type":"related"}],"termid":"MONDO:0018360","xrefs":{"Monarch":{"xref_id":"0018360"}}}


id: MONDO:0044981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypersensitivity reaction disease","termid":"MONDO:0000605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"pseudoallergy","secondary_identifiers":["UMLS:C3662262","MEDGEN:783416","SCTID:609397002","ICD9:V15.09"],"synonyms":[{"name":"non-allergic hypersensitivity to substance","type":"exact"},{"name":"pseudoallergy to substance","type":"exact"}],"termid":"MONDO:0044981","xrefs":{"Monarch":{"xref_id":"0044981"}}}


id: PBO:0087292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Silencing protein; interacts with Sir2p, Sir4p, and histone H3/H4 tails to establish transcriptionally silent chromatin; required for spreading of silenced chromatin; recruited to chromatin through interaction with Rap1p; C-terminus assumes variant winged helix-turn-helix (wH) fold that mediates homodimerization, which is critical for holo-SIR complex loading; required for telomere hypercluster formation in quiescent yeast cells; has paralog ORC1 from whole genome duplication","termid":"PBO:0087292"}


id: GO:0033308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of hydroxyectoine across a membrane by means of some agent such as a transporter or a pore.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transport","termid":"GO:0015697"},{"relation_name":"is_a","term_name":"monocarboxylic acid transport","termid":"GO:0015718"},{"relation_name":"is_a","term_name":"organic hydroxy compound transport","termid":"GO:0015850"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0055085"],"is_obsolete":false,"name":"hydroxyectoine transmembrane transport","synonyms":[{"name":"hydroxyectoine transport","type":"related"}],"termid":"GO:0033308"}


id: GO:0006873
data:
  {"annotated_genes":["SJAG_02019","SJAG_02716","SJAG_01913","SJAG_01397","SJAG_04616","SJAG_03962","SJAG_02023","SJAG_00822","SJAG_01541","SJAG_01803","SJAG_02735","SJAG_02457","SJAG_02968","SJAG_00605","SJAG_05294","SJAG_01990","SJAG_02080","SJAG_04955","SJAG_02474","SJAG_03866","SJAG_01435","SJAG_04031","SJAG_04584","SJAG_02834","SJAG_03667","SJAG_04892","SJAG_00532","SJAG_04743","SJAG_04698","SJAG_00212","SJAG_02883","SJAG_02240","SJAG_04403","SJAG_04757","SJAG_01353","SJAG_01078","SJAG_02532","SJAG_03850","SJAG_02578","SJAG_03793","SJAG_00136","SJAG_04675","SJAG_04607","SJAG_04760","SJAG_04028","SJAG_00328","SJAG_00916","SJAG_01007","SJAG_03862","SJAG_01817","SJAG_04032","SJAG_04258","SJAG_03631","SJAG_01004","SJAG_04677","SJAG_04867","SJAG_00802","SJAG_04096","SJAG_04167","SJAG_02470","SJAG_01694","SJAG_01129","SJAG_03528","SJAG_00516","SJAG_00923","SJAG_00668","SJAG_02847","SJAG_01400","SJAG_03516","SJAG_02399","SJAG_01669","SJAG_04185","SJAG_00222","SJAG_00792","SJAG_03879","SJAG_00301"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114852,102507,96120,59859,79666],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[72745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[77115,75546,101933,75612,82126,73393,115418,82173,73041,100119,75466,72073,74371,80355,120655,110838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[95145,76998,109888,79987,102181],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[79988,96066,106276,73120,76999,94314,59512,80123,76230,77707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[76441,72257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[77705,75648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[101934,74174,80043,72623,97450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[106331,74753,77858,96735,102182,76695,105589,106191,79142,116402,76134,80250],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[105800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[115268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[79664,94458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[102533],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030641"},{"annotations":[72755,75166,79866,73355,68176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051453"},{"annotations":[63175,62848,71272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"},{"annotations":[97663,72850,103657,105926,74996,76034,81991,80458,90044,97842,74733,102035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007035"}]},"cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of a steady state level of monoatomic ions within a cell. Monatomic ions (also called simple ions) are ions consisting of exactly one atom.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion homeostasis","termid":"GO:0050801"},{"relation_name":"is_a","term_name":"intracellular chemical homeostasis","termid":"GO:0055082"}],"gene_count":76,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_00222":null,"SJAG_00301":null,"SJAG_00328":null,"SJAG_00516":null,"SJAG_00532":null,"SJAG_00605":null,"SJAG_00668":null,"SJAG_00792":null,"SJAG_00802":null,"SJAG_00822":null,"SJAG_00916":null,"SJAG_00923":null,"SJAG_01004":null,"SJAG_01007":null,"SJAG_01078":null,"SJAG_01129":null,"SJAG_01353":null,"SJAG_01397":null,"SJAG_01400":null,"SJAG_01435":null,"SJAG_01541":null,"SJAG_01669":null,"SJAG_01694":null,"SJAG_01803":null,"SJAG_01817":null,"SJAG_01913":null,"SJAG_01990":null,"SJAG_02019":null,"SJAG_02023":null,"SJAG_02080":null,"SJAG_02240":null,"SJAG_02399":null,"SJAG_02457":null,"SJAG_02470":null,"SJAG_02474":null,"SJAG_02532":null,"SJAG_02578":null,"SJAG_02716":null,"SJAG_02735":null,"SJAG_02834":null,"SJAG_02847":null,"SJAG_02883":null,"SJAG_02968":null,"SJAG_03516":null,"SJAG_03528":null,"SJAG_03631":null,"SJAG_03667":null,"SJAG_03793":null,"SJAG_03850":null,"SJAG_03862":null,"SJAG_03866":null,"SJAG_03879":null,"SJAG_03962":null,"SJAG_04028":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04096":null,"SJAG_04167":null,"SJAG_04185":null,"SJAG_04258":null,"SJAG_04403":null,"SJAG_04584":null,"SJAG_04607":null,"SJAG_04616":null,"SJAG_04675":null,"SJAG_04677":null,"SJAG_04698":null,"SJAG_04743":null,"SJAG_04757":null,"SJAG_04760":null,"SJAG_04867":null,"SJAG_04892":null,"SJAG_04955":null,"SJAG_05294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intracellular monoatomic ion homeostasis","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"cellular ion homeostasis","type":"broad"},{"name":"cellular monoatomic ion homeostasis","type":"exact"}],"termid":"GO:0006873","terms_by_termid":{"GO:0006874":null,"GO:0006878":null,"GO:0006879":null,"GO:0006882":null,"GO:0007035":null,"GO:0010106":null,"GO:0010961":null,"GO:0030007":null,"GO:0030026":null,"GO:0030641":null,"GO:0032468":null,"GO:0033212":null,"GO:0033214":null,"GO:0033215":null,"GO:0051453":null,"GO:0098711":null}}


id: GO:0061832
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Testis-specific junction between mature Sertoli cells involved in establishing the blood-testis barrier of the Sertoli cell.","definition_xrefs":["PMID:23546604","GOC:bc","PMID:22332112","GOC:aruk","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"basal ectoplasmic specialization","synonyms":[{"name":"basal ES","type":"exact"}],"termid":"GO:0061832"}


id: MONDO:0013541
data:
  {"annotated_genes":["SJAG_04003"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87929],"is_not":false,"summary":null,"term":"MONDO:0013541"}]},"cv_name":"mondo","definition":"Any complex cortical dysplasia with other brain malformations in which the cause of the disease is a mutation in the TUBB3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex cortical dysplasia with other brain malformations","termid":"MONDO:0000904"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04003":null},"genotype_count":0,"is_obsolete":false,"name":"complex cortical dysplasia with other brain malformations 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:614039","DOID:0090137","UMLS:C3808397","GARD:13032","Orphanet:300570","MEDGEN:814727"],"synonyms":[{"name":"CDCBM1","type":"exact"},{"name":"TUBB3 complex cortical dysplasia with other brain malformations","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations caused by mutation in TUBB3","type":"exact"},{"name":"complex cortical dysplasia with other brain malformations type 1","type":"exact"},{"name":"cortical dysgenesis with pontocerebellar hypoplasia due to TUBB3 mutation","type":"exact"},{"name":"cortical dysplasia, Complex, with Other brain malformations type 1","type":"exact"},{"name":"cortical dysplasia, complex, with other brain malformations 1","type":"related"}],"termid":"MONDO:0013541","terms_by_termid":{"MONDO:0013541":null},"xrefs":{"Monarch":{"xref_id":"0013541"}}}


id: FYPO:0002851
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein that is not normally found at the eisosome is observed there.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized protein during vegetative growth","termid":"FYPO:0000782"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"protein mislocalized to eisosome","synonyms":[{"name":"ectopic protein localization to eisosome","type":"exact"},{"name":"protein mislocalised to eisosome","type":"exact"},{"name":"protein mislocalised to eisosome during vegetative growth","type":"exact"},{"name":"protein mislocalized to eisosome during mitotic cell cycle","type":"related"},{"name":"protein mislocalized to eisosome during vegetative growth","type":"exact"}],"termid":"FYPO:0002851"}


id: GO:0031353
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the plastid inner membrane consisting of the gene products having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of plastid inner membrane (obsolete GO:0031353)","synonyms":[{"name":"integral to plastid inner membrane","type":"narrow"}],"termid":"GO:0031353"}


id: FYPO:0001875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the preferential localization of a protein to either the old or new spindle pole body is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to microtubule cytoskeleton during vegetative growth","termid":"FYPO:0000933"},{"relation_name":"is_a","term_name":"abnormal asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","termid":"FYPO:0001874"},{"relation_name":"is_a","term_name":"decreased protein localization to spindle pole body","termid":"FYPO:0002770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased asymmetric protein localization, with protein localized to both mitotic spindle pole bodies","synonyms":[{"name":"decreased asymmetric protein localisation to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic SPB","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during mitotic cell cycle","type":"related"},{"name":"decreased asymmetric protein localization to old or new mitotic spindle pole body during vegetative growth","type":"exact"},{"name":"decreased occurrence of normally asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"},{"name":"reduced asymmetric protein localization to old or new mitotic spindle pole body","type":"exact"}],"termid":"FYPO:0001875"}


id: PBO:0086241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that localizes to the endoplasmic reticulum; also associates with the nuclear pore complex; deletion extends chronological lifespan; highly conserved across species, orthologous to human TMEM33 and paralogous to Pom33p; protein abundance increases in response to DNA replication stress","termid":"PBO:0086241"}


id: MONDO:0020989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The persistence of substantial fetal hemoglobin production into adulthood, usually associated with hemoglobinopathies due to mutations in the alpha and/or beta chain of hemoglobin.","definition_xrefs":["NCIT:C129072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hereditary persistence of fetal hemoglobin","secondary_identifiers":["ICD9:282.7","SCTID:191201002","MEDGEN:5495","UMLS:C0019025","ICD10CM:D56.4"],"synonyms":[{"name":"Disease, Haemoglobin F","type":"related"},{"name":"Disease, Hemoglobin F","type":"related"},{"name":"HEMOGLOBIN F DIS","type":"related"},{"name":"HPFH - Hereditary persistence of fetal hemoglobin","type":"related"},{"name":"HPFH - Hereditary persistence of foetal haemoglobin","type":"related"},{"name":"Haemoglobin F Disease","type":"related"},{"name":"Hb F disease","type":"related"},{"name":"Hemoglobin F Disease","type":"related"},{"name":"Hereditary Persistence of Fetal Hemoglobin","type":"related"},{"name":"Hereditary Persistence of Foetal Haemoglobin","type":"related"},{"name":"Hereditary persistence of fetal hemoglobin","type":"related"},{"name":"Hereditary persistence of foetal haemoglobin","type":"related"},{"name":"hereditary persistence of fetal hemoglobin","type":"exact"}],"termid":"MONDO:0020989","xrefs":{"Monarch":{"xref_id":"0020989"}}}


id: GO:0060900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a camera-type eye from unspecified neurectoderm. This process begins with the differentiation of cells that form the optic field and ends when the optic cup has attained its shape.","definition_xrefs":["GOC:dph","GOC:sdb_2009","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"embryonic camera-type eye morphogenesis","termid":"GO:0048596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"embryonic camera-type eye formation","termid":"GO:0060900"}


id: PBO:0025530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial iron-sulfur cluster assembly protein Isa2","termid":"PBO:0025530"}


id: MOD:01874
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-alanine residue to N-carboxy-L-valine.","definition_xrefs":["PubMed:8312270","PubMed:18688235","PubMed:4593770","PubMed:4647257"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-valine residue","termid":"MOD:00920"},{"relation_name":"is_a","term_name":"carboxylated residue","termid":"MOD:01152"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-carboxy-L-valine","synonyms":[{"name":"(S)-2-carboxyamino-propanoic acid","type":"exact"},{"name":"2-carbamic-propanoic acid","type":"exact"},{"name":"N-carboxymethionine","type":"exact"}],"termid":"MOD:01874"}


id: PBO:0080174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 9","termid":"PBO:0080174"}


id: GO:0047735
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cellobiose + acceptor = cellobiono-1,5-lactone + reduced acceptor.","definition_xrefs":["MetaCyc:CELLOBIOSE-DEHYDROGENASE-ACCEPTOR-RXN","EC:1.1.99.18"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH-OH group of donors","termid":"GO:0016614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cellobiose dehydrogenase (acceptor) activity","secondary_identifiers":["GO:0047737","RHEA:23484"],"synonyms":[{"name":"CBOR activity","type":"related"},{"name":"CDH activity","type":"related"},{"name":"cellobiose dehydrogenase (quinone) activity","type":"narrow"},{"name":"cellobiose dehydrogenase activity","type":"related"},{"name":"cellobiose oxidase activity","type":"related"},{"name":"cellobiose oxidoreductase activity","type":"related"},{"name":"cellobiose-quinone oxidoreductase activity","type":"narrow"},{"name":"cellobiose:(acceptor) 1-oxidoreductase activity","type":"related"},{"name":"cellobiose:acceptor 1-oxidoreductase activity","type":"related"},{"name":"cellobiose:oxygen 1-oxidoreductase activity","type":"related"},{"name":"phanerochaete chrysosporium cellobiose oxidoreductase activity","type":"related"}],"termid":"GO:0047735"}


id: GO:0034767
data:
  {"annotated_genes":["SJAG_04551"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905665"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane transport","termid":"GO:0034764"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"positive regulation of monoatomic ion transport","termid":"GO:0043270"},{"relation_name":"positively_regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04551":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0055085"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"positive regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of transmembrane ion transport","type":"narrow"},{"name":"positive regulation of ion membrane transport","type":"exact"},{"name":"positive regulation of ion transmembrane transport","type":"broad"},{"name":"positive regulation of transmembrane ion transport","type":"exact"},{"name":"stimulation of transmembrane ion transport","type":"narrow"},{"name":"up regulation of transmembrane ion transport","type":"exact"},{"name":"up-regulation of transmembrane ion transport","type":"exact"},{"name":"upregulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034767","terms_by_termid":{"GO:1905665":null}}


id: PBO:0079157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetraspanin 16","termid":"PBO:0079157"}


id: PBO:0054052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1394","termid":"PBO:0054052"}


id: GO:1902735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of receptor-mediated virion attachment to host cell.","definition_xrefs":["GOC:als","PMID:18385238","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of receptor-mediated virion attachment to host cell","termid":"GO:1902734"},{"relation_name":"negatively_regulates","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of receptor-mediated virion attachment to host cell","synonyms":[{"name":"down regulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"down regulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"down-regulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"down-regulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"downregulation of receptor-mediated virion attachment to host cell","type":"exact"},{"name":"downregulation of virion attachment, binding of host cell surface receptor","type":"exact"},{"name":"inhibition of receptor-mediated virion attachment to host cell","type":"narrow"},{"name":"inhibition of virion attachment, binding of host cell surface receptor","type":"narrow"},{"name":"negative regulation of virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:1902735"}


id: GO:0008381
data:
  {"annotated_genes":["SJAG_05342","SJAG_04668","SJAG_05229","SJAG_02877","SJAG_02019","SJAG_02532"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[97696],"is_not":false,"summary":null,"term":"GO:0008381"},{"annotations":[105781],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140135"},{"annotations":[94416,101644,94358,115984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015275"}]},"cv_name":"molecular_function","definition":"Enables the transmembrane transfer of an monoatomic ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["GOC:mtg_transport","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic ion channel activity","termid":"GO:0005216"},{"relation_name":"is_a","term_name":"gated channel activity","termid":"GO:0022836"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02019":null,"SJAG_02532":null,"SJAG_02877":null,"SJAG_04668":null,"SJAG_05229":null,"SJAG_05342":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mechanosensitive monoatomic ion channel activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["TC:1.A.23.2.1","GO:0022833"],"synonyms":[{"name":"mechanically gated channel activity","type":"exact"},{"name":"mechanically-gated channel activity","type":"exact"},{"name":"mechanically-gated ion channel activity","type":"exact"},{"name":"mechanosensitive ion channel activity","type":"broad"}],"termid":"GO:0008381","terms_by_termid":{"GO:0008381":null,"GO:0015275":null,"GO:0140135":null}}


id: GO:0001815
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of antibody-dependent cellular cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of type IIa hypersensitivity","termid":"GO:0001798"},{"relation_name":"is_a","term_name":"regulation of antibody-dependent cellular cytotoxicity","termid":"GO:0001813"},{"relation_name":"is_a","term_name":"positive regulation of leukocyte mediated cytotoxicity","termid":"GO:0001912"},{"relation_name":"positively_regulates","term_name":"antibody-dependent cellular cytotoxicity","termid":"GO:0001788"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of antibody-dependent cellular cytotoxicity","synonyms":[{"name":"activation of antibody-dependent cellular cytotoxicity","type":"narrow"},{"name":"positive regulation of antibody dependent cell death","type":"exact"},{"name":"positive regulation of antibody dependent cell killing","type":"exact"},{"name":"positive regulation of antibody-dependent cell death","type":"exact"},{"name":"positive regulation of antibody-dependent cell killing","type":"exact"},{"name":"stimulation of antibody-dependent cellular cytotoxicity","type":"narrow"},{"name":"up regulation of antibody-dependent cellular cytotoxicity","type":"exact"},{"name":"up-regulation of antibody-dependent cellular cytotoxicity","type":"exact"},{"name":"upregulation of antibody-dependent cellular cytotoxicity","type":"exact"}],"termid":"GO:0001815"}


id: GO:0061635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that affects the structure and integrity of a protein complex by altering the likelihood of its assembly or disassembly.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein complex stability","termid":"GO:0061635"}


id: PATO:0000214
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000214 reproductive function (obsolete PATO:0000214)","termid":"PATO:0000214"}


id: PATO:0001150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001150 absolute susceptibility value (obsolete PATO:0001150)","termid":"PATO:0001150"}


id: MONDO:0014498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial cold autoinflammatory syndrome in which the cause of the disease is a mutation in the NLRC4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial cold autoinflammatory syndrome","termid":"MONDO:0018768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial cold autoinflammatory syndrome 4","secondary_identifiers":["DOID:0090065","Orphanet:576349","MEDGEN:863713","OMIM:616115","UMLS:C4015276","GARD:16061"],"synonyms":[{"name":"FCAS4","type":"related"},{"name":"NLRC4 familial cold autoinflammatory syndrome","type":"exact"},{"name":"NLRC4-related familial cold autoinflammatory syndrome","type":"exact"},{"name":"familial cold autoinflammatory syndrome 4","type":"exact"},{"name":"familial cold autoinflammatory syndrome caused by mutation in NLRC4","type":"exact"},{"name":"familial cold autoinflammatory syndrome type 4","type":"exact"}],"termid":"MONDO:0014498","xrefs":{"Monarch":{"xref_id":"0014498"}}}


id: FYPO:0006050
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic sister chromatid separation is normal (i.e. indistinguishable from wild type). Mitotic sister chromatid separation is the process in which sister chromatids are physically detached from each other during mitosis.","definition_xrefs":["PomBase:mah","PMID:27146110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic sister chromatid separation","termid":"FYPO:0004301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal rate of mitotic sister chromatid separation","synonyms":[{"name":"normal mitotic sister chromatid separation rate","type":"exact"},{"name":"normal rate of mitotic sister chromatid separation during vegetative growth","type":"exact"},{"name":"normal rate of sister chromatid separation during mitosis","type":"exact"},{"name":"normal rate of sister chromatid separation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0006050"}


id: MONDO:0011190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the INVS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis 2","secondary_identifiers":["MESH:C566582","GARD:18182","MEDGEN:355574","OMIM:602088","Orphanet:93591","UMLS:C1865872","DOID:0111113"],"synonyms":[{"name":"INVS nephronophthisis (disease)","type":"exact"},{"name":"NPH2","type":"exact"},{"name":"NPHP2","type":"exact"},{"name":"Nph2","type":"related"},{"name":"infantile nephronophthisis 2","type":"exact"},{"name":"nephronophthisis (disease) caused by mutation in INVS","type":"exact"},{"name":"nephronophthisis 2","type":"exact"},{"name":"nephronophthisis 2, infantile","type":"exact"},{"name":"nephronophthisis type 2","type":"exact"}],"termid":"MONDO:0011190","xrefs":{"Monarch":{"xref_id":"0011190"}}}


id: PBO:0002006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clathrin heavy chain Chc1 (predicted)","termid":"PBO:0002006"}


id: PBO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.-","termid":"PBO:0002237"}


id: PBO:0067073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 104, pseudogene","termid":"PBO:0067073"}


id: PBO:0003204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sid2-Mob1 kinase complex regulatory subunit Mob1","termid":"PBO:0003204"}


id: GO:0002656
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of tolerance induction to nonself antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of tolerance induction dependent upon immune response","termid":"GO:0002653"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to nonself antigen","termid":"GO:0002655"},{"relation_name":"negatively_regulates","term_name":"tolerance induction to nonself antigen","termid":"GO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of tolerance induction to nonself antigen","synonyms":[{"name":"down regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"down-regulation of tolerance induction to nonself antigen","type":"exact"},{"name":"downregulation of tolerance induction to nonself antigen","type":"exact"},{"name":"inhibition of tolerance induction to nonself antigen","type":"narrow"}],"termid":"GO:0002656"}


id: PomGeneEx:0000010
data:
  {"annotation_feature_type":"gene","cv_name":"PomGeneExProt","definition":"A qualifier that describes a level of protein observed under a given set of conditions or at an indicated time.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene expression qualifier","termid":"PomGeneEx:0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein expression level","termid":"PomGeneEx:0000010"}


id: PBO:0011120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase type 2A regulator, PTPA family Ypa1","termid":"PBO:0011120"}


id: GO:0017039
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the release of an N-terminal dipeptide from a peptide comprising four or more residues, with broad specificity; also acts on dipeptidyl 2-naphthylamides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete dipeptidyl-peptidase III activity (obsolete GO:0017039)","synonyms":[{"name":"DPP III activity","type":"related"},{"name":"dipeptidyl aminopeptidase III activity","type":"related"},{"name":"dipeptidyl arylamidase III activity","type":"related"},{"name":"dipeptidyl-peptidase III activity","type":"exact"},{"name":"enkephalinase B activity","type":"narrow"},{"name":"red cell angiotensinase activity","type":"narrow"}],"termid":"GO:0017039"}


id: GO:0036193
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-hydroxy-2H-1,4-benzoxazin-3(4H)-one + O2 + reduced [NADPH--hemoprotein reductase] = DIBOA + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:31939"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen","termid":"GO:0016712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-hydroxy-1,4-benzoxazin-3-one monooxygenase activity","secondary_identifiers":["EC:1.14.14.110","KEGG_REACTION:R07423"],"termid":"GO:0036193"}


id: FYPO:0005191
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype in which a cellular response to stress is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"},{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular response to stress","termid":"FYPO:0005191"}


id: MONDO:0015126
data:
  {"annotated_genes":["SJAG_02398","SJAG_00260","SJAG_03920"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87378,87379,87377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011740"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_02398":null,"SJAG_03920":null},"genotype_count":0,"is_obsolete":false,"name":"polyendocrinopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1826133","GARD:19800","UMLS:C5681797","Orphanet:101956"],"termid":"MONDO:0015126","terms_by_termid":{"MONDO:0011740":null},"xrefs":{"Monarch":{"xref_id":"0015126"}}}


id: PBO:0091100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit S8","termid":"PBO:0091100"}


id: RO:HOM0000006
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Homology that is defined by similarity with regard to selected structural parameters.","definition_xrefs":["ISBN:0123195837"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_homology_relationship_with","termid":"RO:HOM0000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_structural_homology_relationship_with","synonyms":[{"name":"idealistic homology","type":"related"},{"name":"structural homologous to","type":"exact"}],"termid":"RO:HOM0000006"}


id: PBO:0053410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 347","termid":"PBO:0053410"}


id: PBO:0070461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4 pseudogene 4","termid":"PBO:0070461"}


id: PBO:0000521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIH complex subunit Rad15","termid":"PBO:0000521"}


id: MONDO:0006348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the pancreas. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:C95583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"pancreatic endocrine carcinoma","termid":"MONDO:0005893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pancreatic small cell neuroendocrine carcinoma","secondary_identifiers":["EFO:1000444","MEDGEN:459466","UMLS:C2987240"],"synonyms":[{"name":"endocrine pancreas small cell carcinoma","type":"exact"},{"name":"pancreatic small cell NEC","type":"exact"},{"name":"pancreatic small cell NEC G3","type":"exact"},{"name":"pancreatic small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell carcinoma of endocrine pancreas","type":"exact"}],"termid":"MONDO:0006348","xrefs":{"Monarch":{"xref_id":"0006348"}}}


id: MONDO:0032863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 41","secondary_identifiers":["DOID:0111912","MEDGEN:1684739","UMLS:C5231455","GARD:18412","OMIM:618670"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 41","type":"related"},{"name":"SPGF41","type":"related"}],"termid":"MONDO:0032863","xrefs":{"Monarch":{"xref_id":"0032863"}}}


id: GO:0120072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of any pyloric antrum smooth muscle contraction.","definition_xrefs":["PMID:15890336","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120071"},{"relation_name":"is_a","term_name":"positive regulation of gastro-intestinal system smooth muscle contraction","termid":"GO:1904306"},{"relation_name":"positively_regulates","term_name":"pyloric antrum smooth muscle contraction","termid":"GO:0120065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pyloric antrum smooth muscle contraction","termid":"GO:0120072"}


id: PBO:0080214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villin like","termid":"PBO:0080214"}


id: FYPO:0007130
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which homoserine O-acetyltransferase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal homoserine O-acetyltransferase activity","termid":"FYPO:0007129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished homoserine O-acetyltransferase activity","synonyms":[{"name":"homoserine O-acetyltransferase activity abolished","type":"exact"}],"termid":"FYPO:0007130"}


id: FYPO:0007723
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_03250:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03250","name":"sst4delta","uniquename":"SJAG_03250:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003751"},{"annotations":[121325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003780"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a physical object quality, such as morphology, number, location, etc., of a cell or a cellular component is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02763":null,"SJAG_03250":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]},"sst4delta":{"display_name":"sst4delta","display_uniquename":"sst4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03250:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular physical quality phenotype","references_by_uniquename":{"PMID:26774782":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03250","SJAG_02763"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","sst4delta"],"synonyms":[{"name":"normal cellular physical object quality","type":"exact"}],"termid":"FYPO:0007723","terms_by_termid":{"FYPO:0003751":null,"FYPO:0003780":null}}


id: MONDO:1010755
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary sparse hair and dental aplasia in cattle associated with a variation in the EDA gene.","definition_xrefs":["PMID:38252617"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia, non-human animal","termid":"MONDO:1012576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked hypohidrotic ectodermal dysplasia, EDA-related, cattle","secondary_identifiers":["OMIA:000543-9913"],"termid":"MONDO:1010755","xrefs":{"Monarch":{"xref_id":"1010755"}}}


id: MOD:00760
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation - missing ref","definition_xrefs":["Unimod:311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"biantennary N4-glycosylated asparagine","synonyms":[{"name":"Biantennary","type":"related"},{"name":"Hex(5)HexNAc(4)","type":"related"}],"termid":"MOD:00760"}


id: PBO:0029774
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_population_with_abnormal_spore_shape_(obsolete_FYPO:0002465)","termid":"PBO:0029774"}


id: PBO:0031089
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_manganese_depletion","termid":"PBO:0031089"}


id: PBO:0088250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication termination factor Rtf1","termid":"PBO:0088250"}


id: GO:0051433
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BH2 protein domain, present in Bcl-2 family members. Proteins that act as inhibitors of apoptosis harbour at least three BH domains: BH1, BH2 and BH3; the BH1 and BH2 domains are found in all death antagonists of the Bcl-2 family but only in one class of death agonists.","definition_xrefs":["PMID:11048732","PMID:9704409","Prosite:PS01258","PMID:12133724","PMID:9020082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"BH domain binding","termid":"GO:0051400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BH2 domain binding","termid":"GO:0051433"}


id: MONDO:0020597
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An angiokeratoma that is located on the scrotum.","definition_xrefs":["NCIT:C7752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"scrotal hemangioma","termid":"MONDO:0003951"},{"relation_name":"is_a","term_name":"angiokeratoma of Fordyce","termid":"MONDO:0003954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"angiokeratoma of scrotum","secondary_identifiers":["SCTID:735082004"],"synonyms":[{"name":"angiokeratoma of fordyce","type":"broad"},{"name":"angiokeratoma of scrotum","type":"exact"},{"name":"angiokeratoma of the scrotum","type":"exact"},{"name":"fordyce angiokeratoma","type":"broad"},{"name":"fordyce-type angiokeratoma of scrotum","type":"exact"},{"name":"fordyce-type angiokeratoma of the scrotum","type":"exact"},{"name":"scrotal angiokeratoma","type":"exact"},{"name":"scrotal fordyce-type angiokeratoma","type":"exact"},{"name":"scrotum angiokeratoma","type":"exact"}],"termid":"MONDO:0020597","xrefs":{"Monarch":{"xref_id":"0020597"}}}


id: PBO:0080944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger B-box domain containing","termid":"PBO:0080944"}


id: MONDO:0012639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, complex type of hereditary spastic paraplegia characterized by progressive spastic paraplegia (presenting in early childhood) associated with delayed motor development, severe intellectual disability and joint contractures. A thin corpus callosum is equally noted on brain magnetic resonance imaging. SPG18 is caused by a mutation in the ERLIN2 gene (8p11.2) encoding the protein, Erlin-2.","definition_xrefs":["Orphanet:209951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 18","secondary_identifiers":["OMIM:611225","MESH:C567628","MEDGEN:442343","GARD:4922","UMLS:C2749936","SCTID:732932004","DOID:0110771"],"synonyms":[{"name":"ERLIN2 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"SPG18","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in ERLIN2","type":"exact"},{"name":"autosomal recessive spastic paraplegia 18","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 18","type":"exact"},{"name":"hereditary spastic paraplegia type 18","type":"exact"},{"name":"intellectual disability, motor dysfunction and joint contractures","type":"exact"},{"name":"intellectual disability, motor dysfunction, and Joint contractures","type":"related"},{"name":"spastic paraplegia 18","type":"related"},{"name":"spastic paraplegia 18, autosomal recessive","type":"related"}],"termid":"MONDO:0012639","xrefs":{"Monarch":{"xref_id":"0012639"}}}


id: FYPO:0007928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ethylenediaminetetraacetic acid (EDTA). Cells stop growing (and may die) at a concentration of ethylenediaminetetraacetic acid (EDTA) that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to ethylenediaminetetraacetic acid","synonyms":[{"name":"sensitive to EDTA","type":"exact"}],"termid":"FYPO:0007928"}


id: PBO:0055775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"loss of heterozygosity on chromosome 1, region 1","termid":"PBO:0055775"}


id: FYPO:0008411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in a mating cell in which the phosphorylation of one or more specific proteins, or of specific protein sites, occurs to a lower extent than normal.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein phosphorylation","termid":"FYPO:0002677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein phosphorylation during mating","termid":"FYPO:0008411"}


id: MONDO:0018729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of rare vascular tumor that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete genetic vascular tumor (obsolete MONDO:0018729)","secondary_identifiers":["Orphanet:459543"],"synonyms":[{"name":"genetic rare vascular tumor","type":"exact"},{"name":"rare genetic vascular tumor","type":"exact"}],"termid":"MONDO:0018729","xrefs":{"Monarch":{"xref_id":"0018729"}}}


id: PBO:0084992
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent medium chain alcohol dehydrogenase; has broad substrate specificity; member of the cinnamyl family of alcohol dehydrogenases; may be involved in fusel alcohol synthesis or in aldehyde tolerance","termid":"PBO:0084992"}


id: PBO:0041175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"butyrophilin subfamily 1 member A1 pseudogene 1","termid":"PBO:0041175"}


id: PBO:0045175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member A3","termid":"PBO:0045175"}


id: GO:0009071
data:
  {"annotated_genes":["SJAG_02901","SJAG_03641","SJAG_03861","SJAG_03671"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98424,76128,79995],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019464"},{"annotations":[115994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019450"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of amino acids of the serine family, comprising cysteine, glycine, homoserine, selenocysteine and serine.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine family amino acid metabolic process","termid":"GO:0009069"},{"relation_name":"is_a","term_name":"alpha-amino acid catabolic process","termid":"GO:1901606"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02901":null,"SJAG_03641":null,"SJAG_03671":null,"SJAG_03861":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"serine family amino acid catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"serine family amino acid breakdown","type":"exact"},{"name":"serine family amino acid catabolism","type":"exact"},{"name":"serine family amino acid degradation","type":"exact"}],"termid":"GO:0009071","terms_by_termid":{"GO:0019450":null,"GO:0019464":null}}


id: PATO:0001936
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spheroid quality inhering in a bearer by virtue of the bearer's being egg-shaped and flat, with the narrow end attached to the base.","definition_xrefs":["wordreference:wordreference"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovate","termid":"PATO:0001891"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obovate","synonyms":[{"name":"obovoid","type":"related"}],"termid":"PATO:0001936"}


id: SO:0000634
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An mRNA that encodes multiple proteins from at least two non-overlapping regions.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"polycistronic","termid":"SO:0000880"},{"relation_name":"is_a","term_name":"polycistronic_transcript","termid":"SO:0000078"},{"relation_name":"is_a","term_name":"mRNA","termid":"SO:0000234"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycistronic_mRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/Polycistronic_mRNA"],"synonyms":[{"name":"polycistronic mRNA","type":"exact"},{"name":"polycistronic processed transcript","type":"related"}],"termid":"SO:0000634"}


id: PBO:0090309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"organic solute transmembrane transporter","termid":"PBO:0090309"}


id: MONDO:0019005
data:
  {"annotated_genes":["SJAG_01896"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013163"}]},"cv_name":"mondo","definition":"Progressive tubulointerstitial injury, inherited in an autosomal recessive pattern, caused by mutations in genes involved in ciliary function, which may result in an end stage renal failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited renal tubular disease","termid":"MONDO:0015962"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01896":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005240"],"is_obsolete":false,"name":"nephronophthisis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0687120","Orphanet:655","icd11.foundation:158151813","MEDGEN:146912","DOID:12712","NANDO:2100015","NANDO:2200140","OMIMPS:256100","NCIT:C123200","HP:0000090","GARD:206","NANDO:1201036","NANDO:2200170"],"synonyms":[{"name":"medullary cystic disease","type":"exact"},{"name":"medullary cystic kidney","type":"exact"},{"name":"nephronophthisis","type":"exact"},{"name":"nephronophthisis (disease)","type":"exact"}],"termid":"MONDO:0019005","terms_by_termid":{"MONDO:0013163":null},"xrefs":{"Monarch":{"xref_id":"0019005"}}}


id: MONDO:0018661
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosquito-born virus disease characterized by a clinical course that may be asymptomatic or mild with fever, conjunctivitis, muscle and joint pain, headache, exanthema, but may also be associated with severe neurological (meningitis, meningoencephalitis and myelitis) and auto-immune (Guillain-Barre syndrome) complications, as well as a potential increase of birth defects (microcephaly) if the infection occurs during pregnancy.","definition_xrefs":["Orphanet:448237"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Flaviviridae infectious disease","termid":"MONDO:0005763"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zika virus infectious disease","secondary_identifiers":["SCTID:3928002","DOID:0060478","ICD10CM:A92.5","UMLS:C0276289","MEDGEN:547236","GARD:12894","icd11.foundation:1401438580","MESH:D000071243","NCIT:C128423"],"synonyms":[{"name":"ZikV infection","type":"exact"},{"name":"Zika","type":"exact"},{"name":"Zika fever","type":"related"},{"name":"Zika virus caused disease or disorder","type":"exact"},{"name":"Zika virus disease","type":"exact"},{"name":"Zika virus disease or disorder","type":"exact"},{"name":"Zika virus infection","type":"exact"},{"name":"Zika virus infectious disease","type":"exact"},{"name":"congenital Zika syndrome","type":"narrow"},{"name":"congenital Zika virus infection","type":"narrow"},{"name":"fever, Zika","type":"related"}],"termid":"MONDO:0018661","xrefs":{"Monarch":{"xref_id":"0018661"}}}


id: MONDO:0001072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A pre-eclampsia characterized by the presence of hypertension without evidence of end-organ damage, in a woman who was normotensive before 20 weeks' gestation.","definition_xrefs":["DOID:10590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"preeclampsia","termid":"MONDO:0005081"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mild pre-eclampsia","secondary_identifiers":["ICD9:642.40","ICD9:642.41","ICD9:642.44","MEDGEN:542203","ICD9:642.42","UMLS:C0269658","SCTID:41114007","icd11.foundation:690705840","ICD9:642.43"],"termid":"MONDO:0001072","xrefs":{"Monarch":{"xref_id":"0001072"}}}


id: GO:1904989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell activation.","definition_xrefs":["PMID:24255059","GOC:BHF_miRNA","GOC:BHF","GOC:TermGenie","GOC:bc","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell activation","termid":"GO:0050867"},{"relation_name":"is_a","term_name":"regulation of endothelial cell activation","termid":"GO:1904987"},{"relation_name":"positively_regulates","term_name":"endothelial cell activation","termid":"GO:0042118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell activation","synonyms":[{"name":"activation of endothelial cell activation","type":"narrow"},{"name":"up regulation of endothelial cell activation","type":"exact"},{"name":"up-regulation of endothelial cell activation","type":"exact"},{"name":"upregulation of endothelial cell activation","type":"exact"}],"termid":"GO:1904989"}


id: GO:0070535
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A histone ubiquitination process in which a polymer of ubiquitin, formed by linkages between lysine residues at position 63 of the ubiquitin monomers, is added to a lysine residue in histone H2A or the variant H2AX.","definition_xrefs":["GOC:mah","PMID:18430235"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A K63-linked ubiquitination (obsolete GO:0070535)","termid":"GO:0070535"}


id: MONDO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete esophagus adenocarcinoma (obsolete MONDO:0003201)","termid":"MONDO:0003201","xrefs":{"Monarch":{"xref_id":"0003201"}}}


id: PBO:0071942
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S4X pseudogene 19","termid":"PBO:0071942"}


id: SO:0000575
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small cytoplasmic RNA (scRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scRNA_encoding","synonyms":[{"name":"scRNA encoding","type":"exact"}],"termid":"SO:0000575"}


id: PBO:0091091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory complex III assembly protein Cbp4","termid":"PBO:0091091"}


id: GO:0140698
data:
  {"annotated_genes":["SJAG_01745","SJAG_02698","SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91083,93350,96614],"is_not":false,"summary":null,"term":"GO:0140698"}]},"cv_name":"biological_process","definition":"The process in which physical connections are formed between sub-telomeric heterochromatin and the nuclear envelope facilitating bouquet formation.","definition_xrefs":["PMID:31635174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01745":null,"SJAG_02698":null,"SJAG_03449":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"attachment of telomeric heterochromatin to nuclear envelope","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"attachment of telomeres to nuclear envelope","type":"broad"},{"name":"attachment of telomeric chromatin to nuclear envelope","type":"broad"},{"name":"heterochromatin organization","type":"broad"}],"termid":"GO:0140698","terms_by_termid":{"GO:0140698":null}}


id: PR:O14100
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- zds1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14100"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein zds1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31F12.01","synonyms":[{"name":"Spom972h-zds1","type":"exact"},{"name":"meiotically up-regulated gene 88 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14100"}


id: PBO:0017851
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Leukodystrophy","termid":"PBO:0017851"}


id: GO:0075151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its receptor-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of receptor-mediated signal transduction in response to host (obsolete GO:0075151)","synonyms":[{"name":"positive regulation of symbiont receptor-mediated signal transduction in response to host","type":"exact"}],"termid":"GO:0075151"}


id: PBO:0084241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Inhibitor of the Anaphase-Promoting Complex/Cyclosome (APC/C); binds to APC/C and inhibits the activity of both APC/C(Cdc20) and APC/C(Cdh1); inhibits the binding of Cdc20 and Cdh1 to APC/C; overexpression results in increased sensitivity to microtubule poison; originally identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; functional homolog of human MAD2L1BP (p31comet)","termid":"PBO:0084241"}


id: PR:O60072
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An activating signal cointegrator 1 complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11752:SF8","OMA:SCHPO03837","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"helicase mug81 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC13G1.10c","secondary_identifiers":["UniProtKB:O60072"],"synonyms":[{"name":"Spom972h-ASCC3","type":"exact"},{"name":"meiotically up-regulated gene 81 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60072"}


id: PBO:0029080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_meiotic_spindle_pole_body","termid":"PBO:0029080"}


id: FYPO:0007917
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of  dihydroceramide measured in the cell is lower than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular dihydroceramide level","synonyms":[{"name":"decreased cellular DH-cer level","type":"exact"}],"termid":"FYPO:0007917"}


id: PBO:0071818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 13","termid":"PBO:0071818"}


id: GO:0061701
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A spherical, bilayered proteolipid vesicle released from gram-negative bacterial outer membranes.","definition_xrefs":["GOC:dph","GOC:pr","PMID:20596524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extracellular vesicle","termid":"GO:1903561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0005576","GO:0005575"],"is_obsolete":false,"name":"bacterial outer membrane vesicle","termid":"GO:0061701"}


id: MONDO:0022464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete anophthalmia microcephaly hypogonadism (obsolete MONDO:0022464)","termid":"MONDO:0022464","xrefs":{"Monarch":{"xref_id":"0022464"}}}


id: GO:0015481
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of maltose from one side of a membrane to the other. Maltose is the disaccharide 4-O-alpha-D-glucopyranosyl-D-glucopyranose, an intermediate in the enzymatic breakdown of glycogen and starch. This transporter is a porin so enables the energy independent passage of substances, sized less than 1000 Da, across a membrane. The transmembrane portions of porins consist exclusively of beta-strands which form a beta-barrel. They are found in the outer membranes of Gram-negative bacteria, mitochondria, plastids and possibly acid-fast Gram-positive bacteria.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose transmembrane transporter activity","termid":"GO:0005363"},{"relation_name":"is_a","term_name":"porin activity","termid":"GO:0015288"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"maltose transporting porin activity","secondary_identifiers":["Wikipedia:Maltoporin"],"synonyms":[{"name":"maltoporin","type":"exact"}],"termid":"GO:0015481"}


id: PBO:0012523
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_o_results_in_morphogenesis_of","termid":"PBO:0012523"}


id: GO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The external part of the host cell wall and/or host plasma membrane.","definition_xrefs":["GOC:rph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"host cell part","termid":"GO:0033643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"host cell surface","termid":"GO:0044228"}


id: PBO:0051443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 3-29 (pseudogene)","termid":"PBO:0051443"}


id: FYPO:0007132
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more microtubules occurs to a greater extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein-protein interaction","termid":"FYPO:0001571"},{"relation_name":"is_a","term_name":"abnormal microtubule binding","termid":"FYPO:0001943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000702","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased microtubule binding","termid":"FYPO:0007132"}


id: GO:0045213
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving neurotransmitter receptors.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter receptor metabolic process (obsolete GO:0045213)","synonyms":[{"name":"neurotransmitter receptor metabolism","type":"exact"}],"termid":"GO:0045213"}


id: GO:0045782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell budding.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell budding","termid":"GO:0007116"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"positive regulation of asexual reproduction","termid":"GO:1903666"},{"relation_name":"positively_regulates","term_name":"cell budding","termid":"GO:0007114"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell budding","synonyms":[{"name":"activation of cell budding","type":"narrow"},{"name":"positive regulation of budding","type":"broad"},{"name":"stimulation of cell budding","type":"narrow"},{"name":"up regulation of cell budding","type":"exact"},{"name":"up-regulation of cell budding","type":"exact"},{"name":"upregulation of cell budding","type":"exact"}],"termid":"GO:0045782"}


id: PATO:0000469
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000469 high (obsolete PATO:0000469)","termid":"PATO:0000469"}


id: FYPO:0001308
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of long-chain fatty acid-CoA ligase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal long-chain fatty acid-CoA ligase activity","termid":"FYPO:0001305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652","FYPO:0000661","FYPO:0005447","FYPO:0000654","FYPO:0000002"],"is_obsolete":false,"name":"increased long-chain fatty acid-CoA ligase activity","synonyms":[{"name":"increased lcfa-ligase activity","type":"exact"}],"termid":"FYPO:0001308"}


id: MONDO:0009692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myelofibrosis with myeloid metaplasia is a myeloproliferative disease with annual incidence of approximately 1 case per 100,000 individuals and age at diagnosis around 60 (an increased prevalence is noted in Ashkenazi Jews). Clinical manifestations depend on the type of blood cell affected and may include anemia, pallor, splenomegaly, hypermetabolic state, petechiae, ecchymosis, bleeding, lymphadenopathy, hepatomegaly, portal hypertension.","definition_xrefs":["Orphanet:824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired aplastic anemia","termid":"MONDO:0015610"},{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046","MONDO:0002280"],"is_obsolete":false,"name":"primary myelofibrosis","secondary_identifiers":["ICD10CM:D47.4","NORD:1611","OMIM:254450","icd11.foundation:1407285327","NCIT:C2862","icd11.foundation:336704235","UMLS:C0001815","MEDGEN:7929","EFO:0002430","ICD9:238.76","DOID:4971","ICD9:289.83","GARD:8618","ICDO:9961/3","MESH:D055728","ONCOTREE:PMF"],"synonyms":[{"name":"AMM","type":"exact"},{"name":"Agnogenic myeloid metaplasia","type":"exact"},{"name":"CIMF","type":"exact"},{"name":"aleukemic myelosis","type":"exact"},{"name":"bone marrow fibrosis","type":"exact"},{"name":"chronic idiopathic myelofibrosis","type":"exact"},{"name":"idiopathic bone marrow fibrosis","type":"exact"},{"name":"idiopathic myelofibrosis","type":"exact"},{"name":"megakaryocytic myelosclerosis","type":"exact"},{"name":"myelofibrosis","type":"related"},{"name":"myelofibrosis with myeloid metaplasia","type":"narrow"},{"name":"myelofibrosis with myeloid metaplasia, somatic","type":"exact"},{"name":"myelofibrosis, somatic","type":"exact"},{"name":"myeloid metaplasia","type":"related"},{"name":"myelosclerosis","type":"exact"},{"name":"myelosclerosis with myeloid metaplasia","type":"exact"},{"name":"osteomyelofibrosis","type":"exact"},{"name":"primary myelofibrosis","type":"exact"}],"termid":"MONDO:0009692","xrefs":{"Monarch":{"xref_id":"0009692"}}}


id: PBO:0044378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 1 subfamily A member 2","termid":"PBO:0044378"}


id: GO:1902631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of membrane hyperpolarization.","definition_xrefs":["GOC:TermGenie","PMID:23223304","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"is_a","term_name":"regulation of membrane hyperpolarization","termid":"GO:1902630"},{"relation_name":"negatively_regulates","term_name":"membrane hyperpolarization","termid":"GO:0060081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of membrane hyperpolarization","synonyms":[{"name":"down regulation of membrane hyperpolarization","type":"exact"},{"name":"down-regulation of membrane hyperpolarization","type":"exact"},{"name":"downregulation of membrane hyperpolarization","type":"exact"},{"name":"inhibition of membrane hyperpolarization","type":"narrow"}],"termid":"GO:1902631"}


id: PBO:0000820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exosome subunit Rrp40 (predicted)","termid":"PBO:0000820"}


id: MONDO:0008034
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Becker muscular dystrophy","termid":"MONDO:0010311"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, pseudohypertrophic, with Internalized capillaries","secondary_identifiers":["UMLS:C1834652","MEDGEN:320399","GARD:15089","MESH:C563554","OMIM:159050"],"synonyms":[{"name":"muscular dystrophy, pseudohypertrophic, with Internalized capillaries","type":"exact"}],"termid":"MONDO:0008034","xrefs":{"Monarch":{"xref_id":"0008034"}}}


id: GO:0032672
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-3 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-3 production","termid":"GO:0032632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-3 production","secondary_identifiers":["GO:0045399"],"synonyms":[{"name":"regulation of IL-3 production","type":"exact"},{"name":"regulation of interleukin-3 biosynthetic process","type":"narrow"}],"termid":"GO:0032672"}


id: PBO:0052218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium sodium-activated channel subfamily T member 2","termid":"PBO:0052218"}


id: PBO:0080609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 45B","termid":"PBO:0080609"}


id: PBO:0077498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 217","termid":"PBO:0077498"}


id: FYPO:0007523
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to oxidative stress is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PMID:19625445","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein level during cellular response to oxidative stress","synonyms":[{"name":"decreased protein accumulation during cellular response to oxidative stress","type":"exact"},{"name":"decreased protein level during cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to oxidative stress during vegetative growth","type":"exact"},{"name":"reduced protein level during cellular response to oxidative stress","type":"exact"}],"termid":"FYPO:0007523"}


id: GO:0019770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","ISBN:0781735149","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgG receptor activity","termid":"GO:0019770"}


id: GO:0043317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of cytotoxic T cell degranulation.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated cytotoxicity","termid":"GO:0001914"},{"relation_name":"is_a","term_name":"regulation of leukocyte degranulation","termid":"GO:0043300"},{"relation_name":"regulates","term_name":"cytotoxic T cell degranulation","termid":"GO:0043316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of cytotoxic T cell degranulation","synonyms":[{"name":"regulation of cytotoxic T cell granule exocytosis","type":"exact"},{"name":"regulation of cytotoxic T lymphocyte degranulation","type":"exact"},{"name":"regulation of cytotoxic T lymphocyte granule exocytosis","type":"exact"},{"name":"regulation of cytotoxic T-cell degranulation","type":"exact"},{"name":"regulation of cytotoxic T-cell granule exocytosis","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte degranulation","type":"exact"},{"name":"regulation of cytotoxic T-lymphocyte granule exocytosis","type":"exact"}],"termid":"GO:0043317"}


id: PBO:0072629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 4","termid":"PBO:0072629"}


id: GO:1901418
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to ethanol","termid":"GO:1901416"},{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"positively_regulates","term_name":"response to ethanol","termid":"GO:0045471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to ethanol","synonyms":[{"name":"activation of response to ethanol","type":"narrow"},{"name":"up regulation of response to ethanol","type":"exact"},{"name":"up-regulation of response to ethanol","type":"exact"},{"name":"upregulation of response to ethanol","type":"exact"}],"termid":"GO:1901418"}


id: FYPO:0000261
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. Multiple different phenotypes due to a single mutation.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pleiotropic effects (obsolete FYPO:0000261)","synonyms":[{"name":"pleiotropic effects during vegetative growth","type":"exact"}],"termid":"FYPO:0000261"}


id: GO:0030170
data:
  {"annotated_genes":["SJAG_00714","SJAG_03055","SJAG_03914","SJAG_00673","SJAG_04178","SJAG_00830","SJAG_02791","SJAG_02972","SJAG_03861","SJAG_04678","SJAG_00097","SJAG_04988","SJAG_03961","SJAG_02205","SJAG_00937","SJAG_03671","SJAG_02305","SJAG_01019","SJAG_04149","SJAG_00432","SJAG_04145","SJAG_00186","SJAG_03434","SJAG_00582","SJAG_00495","SJAG_01766","SJAG_03312","SJAG_05230","SJAG_03306","SJAG_03102"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57547,58383,58734,60897,62624,64681,65912,66577,66805,66990,67044,67704,67930,67970,69141,69632,69678,70425,70629,71841,72483,74028,74411,75288,76129,76375,80345,81240,81527,112490],"is_not":false,"summary":null,"term":"GO:0030170"}]},"cv_name":"molecular_function","definition":"Binding to pyridoxal 5' phosphate, 3-hydroxy-5-(hydroxymethyl)-2-methyl4-pyridine carboxaldehyde 5' phosphate, the biologically active form of vitamin B6.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"vitamin B6 binding","termid":"GO:0070279"}],"gene_count":30,"genes_by_uniquename":{"SJAG_00097":null,"SJAG_00186":null,"SJAG_00432":null,"SJAG_00495":null,"SJAG_00582":null,"SJAG_00673":null,"SJAG_00714":null,"SJAG_00830":null,"SJAG_00937":null,"SJAG_01019":null,"SJAG_01766":null,"SJAG_02205":null,"SJAG_02305":null,"SJAG_02791":null,"SJAG_02972":null,"SJAG_03055":null,"SJAG_03102":null,"SJAG_03306":null,"SJAG_03312":null,"SJAG_03434":null,"SJAG_03671":null,"SJAG_03861":null,"SJAG_03914":null,"SJAG_03961":null,"SJAG_04145":null,"SJAG_04149":null,"SJAG_04178":null,"SJAG_04678":null,"SJAG_04988":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"pyridoxal phosphate binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0030170","terms_by_termid":{"GO:0030170":null}}


id: MONDO:0800458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heart disease that is present at birth. Representative examples include atrial, ventricular, and atrioventricular septal defects, double-outlet right ventricle, tetralogy of Fallot, hypoplastic left heart syndrome, aortic stenosis, and coarctation of the aorta.","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0019042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NR2F2 related multiple congenital anomalies/dysmorphic syndrome","synonyms":[{"name":"ARP1-related multiple congenital anomalies/dysmorphic syndrome","type":"exact"},{"name":"COUPTFII-related multiple congenital anomalies/dysmorphic syndrome","type":"exact"},{"name":"NR2F2 related multiple congenital anomalies/dysmorphic syndrome","type":"exact"},{"name":"TCOUP2-related multiple congenital anomalies/dysmorphic syndrome","type":"exact"}],"termid":"MONDO:0800458","xrefs":{"Monarch":{"xref_id":"0800458"}}}


id: GO:0051747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: methyl-dCpdG DNA + H2O = dCpdG DNA + methanol. This reaction is the hydrolytic removal of the methyl group on the 5 position of cytosine in DNA.","definition_xrefs":["PMID:10050851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity","termid":"GO:0016787"},{"relation_name":"is_a","term_name":"DNA demethylase activity","termid":"GO:0035514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140097","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"cytosine C-5 DNA demethylase activity","synonyms":[{"name":"DNA demethylase activity","type":"broad"},{"name":"DNA methyltransferase activity acting on cytosine C-5","type":"exact"},{"name":"hydrolytic DNA demethylase activity","type":"broad"}],"termid":"GO:0051747"}


id: PBO:0050393
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A/B","termid":"PBO:0050393"}


id: PBO:0003663
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TArgeting complex Subunit","termid":"PBO:0003663"}


id: GO:0004994
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with somatostatin to initiate a change in cell activity. Somatostatin is a peptide hormone that regulates the endocrine system by signaling via G protein-coupled somatostatin receptors. Somatostatin has two active forms produced by proteolytic cleavage: a 14 amino acid peptide (SST-14) and a 28 amino acid peptide (SST-28).","definition_xrefs":["GOC:ai","GOC:bf","Wikipedia:Somatostatin"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor activity","termid":"GO:0008188"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"somatostatin receptor activity","synonyms":[{"name":"GHIH receptor activity","type":"exact"},{"name":"SRIF receptor activity","type":"exact"},{"name":"SST receptor activity","type":"exact"},{"name":"growth hormone-inhibiting hormone receptor activity","type":"exact"},{"name":"somatotrophin release inhibiting factor receptor activity","type":"exact"}],"termid":"GO:0004994"}


id: MONDO:1010518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Holoprosencephaly that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"holoprosencephaly, non-human animal","termid":"MONDO:1010033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"holoprosencephaly, pig","secondary_identifiers":["OMIA:000478-9823"],"termid":"MONDO:1010518","xrefs":{"Monarch":{"xref_id":"1010518"}}}


id: GO:0008396
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-oxocholesterol + H+ + NADPH = 7alpha-hydroxycholesterol + NADP+.","definition_xrefs":["RHEA:68740"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 7-alpha-hydroxylase activity","termid":"GO:0008387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"oxysterol 7-alpha-hydroxylase activity","secondary_identifiers":["Reactome:R-HSA-192065","Reactome:R-HSA-5602885","Reactome:R-HSA-191972","Reactome:R-HSA-192178"],"synonyms":[{"name":"cytochrome P450 CYP7B1","type":"narrow"}],"termid":"GO:0008396"}


id: GO:0006316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Lateral transfer of a group I intron to a homologous allele that lacks the intron, mediated by a site-specific endonuclease encoded within the mobile intron; group I introns are self-splicing introns that use guanosine as a cofactor in the splicing reaction.","definition_xrefs":["GOC:mcc","PMID:10487208","ISBN:0716743663"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intron homing","termid":"GO:0006314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006310"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006310"],"is_obsolete":false,"name":"movement of group I intron","termid":"GO:0006316"}


id: PBO:0043507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 2","termid":"PBO:0043507"}


id: PR:O94729
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tti2 gene.","definition_xrefs":["UniProtKB:O94729","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1604.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.17c","synonyms":[{"name":"Spom972h-tti2","type":"exact"}],"termid":"PR:O94729"}


id: GO:0032111
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that initiates the activity of an inactive protein histidine kinase.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of protein histidine kinase activity (obsolete GO:0032111)","synonyms":[{"name":"protein histidine kinase activator","type":"related"}],"termid":"GO:0032111"}


id: PBO:0036434
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Counteracter of CENP-A loading Protein","termid":"PBO:0036434"}


id: PBO:0076857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tet methylcytosine dioxygenase 3","termid":"PBO:0076857"}


id: MONDO:0003998
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An adenoma that arises from the vagina and is characterized by a tubular architectural pattern.","definition_xrefs":["NCIT:C40257"],"gene_count":0,"genotype_count":0,"name":"obsolete vaginal tubular adenoma (obsolete MONDO:0003998)","secondary_identifiers":["DOID:6809"],"synonyms":[{"name":"vaginal tubular adenoma","type":"exact"}],"termid":"MONDO:0003998","xrefs":{"Monarch":{"xref_id":"0003998"}}}


