# terms

id: PATO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001085 absolute acceleration value (obsolete PATO:0001085)","termid":"PATO:0001085"}


id: GO:0034638
data:
  {"annotated_genes":["SJAG_04110"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119042],"is_not":false,"summary":null,"term":"GO:0034638"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of phosphatidylcholines, any of a class of glycerophospholipids in which the phosphatidyl group is esterified to the hydroxyl group of choline.","definition_xrefs":["GOC:jp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"},{"relation_name":"is_a","term_name":"glycerophospholipid catabolic process","termid":"GO:0046475"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04110":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"phosphatidylcholine catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"phosphatidylcholine breakdown","type":"exact"},{"name":"phosphatidylcholine catabolism","type":"exact"},{"name":"phosphatidylcholine degradation","type":"exact"}],"termid":"GO:0034638","terms_by_termid":{"GO:0034638":null}}


id: GO:0140796
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + histone H3 L-arginyl (position 8)= histone H3 L-citrullyl (position 8) + NH4+, resulting in histone H3 citrullination at position 8.","definition_xrefs":["PMID:15339660"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3 arginine deiminase activity","termid":"GO:0141057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0140096","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"histone H3R8 arginine deiminase activity","synonyms":[{"name":"H3-R8 citrullination","type":"exact"},{"name":"histone H3-R8 arginine deiminase activity","type":"exact"},{"name":"histone-arginine deiminase activity (H3-R8 specific)","type":"exact"}],"termid":"GO:0140796"}


id: _global:directly_negatively_regulated_by
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"Process(P2) is directly negatively regulated by process(P1) iff: P1 negatively regulates P2 via direct physical interaction between an agent executing P1 (or some part of P1) and an agent executing P2 (or some part of P2).  For example, if protein A has protein binding activity(P1) that targets protein B and this binding  negatively regulates the kinase activity (P2) of protein B then P2 directly negatively regulated by P1.","direct_ancestors":[{"relation_name":"is_a","term_name":"directly_regulated_by","termid":"_global:directly_regulated_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"directly_negatively_regulated_by","secondary_identifiers":["RO:0002023"],"termid":"_global:directly_negatively_regulated_by"}


id: GO:0102311
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (6E)-8-hydroxygeraniol + 2 NADP = (6E)-8-oxogeranial + 2 NADPH + 2 H+.","definition_xrefs":["EC:1.1.1.324","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"8-hydroxygeraniol dehydrogenase activity","secondary_identifiers":["MetaCyc:RXN-12961","RHEA:32659"],"termid":"GO:0102311"}


id: PBO:0069349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 609, pseudogene","termid":"PBO:0069349"}


id: GO:0003900
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA-directed RNA polymerase I activity (obsolete GO:0003900)","synonyms":[{"name":"DNA-directed RNA polymerase I activity","type":"exact"}],"termid":"GO:0003900"}


id: PBO:0062597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 7 pseudogene","termid":"PBO:0062597"}


id: PBO:0090530
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F1-FO ATP synthase subunit E","termid":"PBO:0090530"}


id: PATO:0001836
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer with some kind of aperture or opening that is blocked or clogged.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structure","termid":"PATO:0000141"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congested","termid":"PATO:0001836"}


id: GO:0005371
data:
  {"annotated_genes":["SJAG_00275","SJAG_01872"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071913"},{"annotations":[114325],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180056"}]},"cv_name":"molecular_function","definition":"Enables the transfer of tricarboxylate from one side of a membrane to the other, up its concentration gradient. The transporter binds the solute and undergoes a series of conformational changes. Transport works equally well in either direction and is driven by a chemiosmotic source of energy. Secondary active transporters include symporters and antiporters.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary active transmembrane transporter activity","termid":"GO:0015291"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"tricarboxylate secondary active transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0005370"],"synonyms":[{"name":"tricarboxylate carrier activity","type":"exact"}],"termid":"GO:0005371","terms_by_termid":{"GO:0071913":null,"GO:0180056":null}}


id: SO:0001309
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"2_methylthio_N6_hydroxynorvalyl_carbamoyladenosine is a modified adenosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_adenosine","termid":"SO:0001273"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"two_methylthio_N6_hydroxynorvalyl_carbamoyladenosine","secondary_identifiers":["RNAMOD:015"],"synonyms":[{"name":"2-methylthio-N6-hydroxynorvalyl carbamoyladenosine","type":"exact"},{"name":"ms2hn6A","type":"exact"},{"name":"two methylthio N6 hydroxynorvalyl carbamoyladenosine","type":"exact"}],"termid":"SO:0001309"}


id: PBO:0040867
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bMERB domain containing 1","termid":"PBO:0040867"}


id: PBO:0080231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VKORC1 pseudogene 2","termid":"PBO:0080231"}


id: MONDO:0014816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split-foot malformation-mesoaxial polydactyly syndrome","secondary_identifiers":["OMIM:616890","GARD:17889","UMLS:C5567487","Orphanet:488232","MEDGEN:1798910"],"synonyms":[{"name":"SFMMP","type":"exact"},{"name":"split-foot malformation with mesoaxial polydactyly","type":"exact"},{"name":"split-foot malformation-mesoaxial polydactyly-nail abnormalities-sensorineural hearing loss syndrome","type":"exact"}],"termid":"MONDO:0014816","xrefs":{"Monarch":{"xref_id":"0014816"}}}


id: GO:1902473
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to synapse.","definition_xrefs":["GOC:TermGenie","PMID:22588719","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization","termid":"GO:0032880"},{"relation_name":"regulates","term_name":"protein localization to synapse","termid":"GO:0035418"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to synapse","synonyms":[{"name":"regulation of protein localisation to synapse","type":"exact"}],"termid":"GO:1902473"}


id: PBO:0056085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lymphocyte antigen 86","termid":"PBO:0056085"}


id: GO:0061660
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of Atg12 to a substrate protein via the reaction X-Atg12 + S = X + S-Atg12, where X is either an E2 or E3 enzyme, the X-Atg12 linkage is a thioester bond, and the S-Atg12 linkage is an isopeptide bond between the C-terminal amino acid of Atg12 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Atg12 transferase activity","termid":"GO:0019777"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0140096","GO:0016746","GO:0003824","GO:0019787"],"is_obsolete":false,"name":"Atg12 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061660"}


id: PBO:0044769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 51","termid":"PBO:0044769"}


id: PR:Q10280
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gaf1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10280"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor gaf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1902.01","synonyms":[{"name":"Gaf-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-gaf1","type":"exact"}],"termid":"PR:Q10280"}


id: FYPO:0007931
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to egtazic acid. Cells stop growing (and may die) at a concentration of egtazic acid that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0000139","FYPO:0001985","FYPO:0002683","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to egtazic acid","termid":"FYPO:0007931"}


id: GO:1990064
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the patterning of the ground tissue.","definition_xrefs":["PMID:23444357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ground tissue pattern formation","synonyms":[{"name":"ground tissue patterning","type":"exact"}],"termid":"GO:1990064"}


id: PBO:0048671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactosidase beta 1 like","termid":"PBO:0048671"}


id: PBO:0071046
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 48","termid":"PBO:0071046"}


id: GO:1900725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving osmoregulated periplasmic glucan.","definition_xrefs":["GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucan metabolic process","termid":"GO:0044042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"osmoregulated periplasmic glucan metabolic process","synonyms":[{"name":"osmoregulated periplasmic glucan metabolism","type":"exact"}],"termid":"GO:1900725"}


id: PBO:0026821
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin-specific_protease_activity","termid":"PBO:0026821"}


id: PR:O94420
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1620.13 gene.","definition_xrefs":["UniProtKB:O94420","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase C1620.13 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1620.13","synonyms":[{"name":"Spom972h-SPCC1620.13","type":"exact"}],"termid":"PR:O94420"}


id: MONDO:0014270
data:
  {"annotated_genes":["SJAG_04127"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87634],"is_not":false,"summary":null,"term":"MONDO:0014270"}]},"cv_name":"mondo","definition":"STT3A-CDG is a form of congenital disorders of N-linked glycosylation characterized by developmental delay, intellectual disability, failure to thrive, hypotonia and seizures. STT3A-CDG is caused by mutations in the gene STT3A (11q23.3).","definition_xrefs":["Orphanet:370921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04127":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"STT3A-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17602","OMIM:615596","DOID:0080572","SCTID:733111000","MEDGEN:1794145","UMLS:C5561935"],"synonyms":[{"name":"CDG Iw","type":"related"},{"name":"CDG syndrome type Iw","type":"exact"},{"name":"CDG-Iw","type":"exact"},{"name":"CDG1W","type":"exact"},{"name":"STT3A-CDG","type":"exact"},{"name":"STT3A-congenital disorder of glycosylation","type":"exact"},{"name":"congenital disorder of glycosylation type 1w","type":"exact"},{"name":"congenital disorder of glycosylation type Iw","type":"exact"},{"name":"congenital disorder of glycosylation, type Iw","type":"related"},{"name":"congenital disorder of glycosylation, type Iw, autosomal recessive","type":"exact"}],"termid":"MONDO:0014270","terms_by_termid":{"MONDO:0014270":null},"xrefs":{"Monarch":{"xref_id":"0014270"}}}


id: MONDO:1011662
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"},{"relation_name":"is_a","term_name":"ulcer disease, non-human animal","termid":"MONDO:1011363"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stomach ulcer, non-human animal","secondary_identifiers":["OMIA:001027"],"termid":"MONDO:1011662","xrefs":{"Monarch":{"xref_id":"1011662"}}}


id: PBO:0070619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 like 1 pseudogene 3","termid":"PBO:0070619"}


id: MONDO:0019013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Angioedema is characterized by the occurrence of transitory and recurrent subcutaneous and/or submucosal edemas resulting in swelling and/or abdominal pain.","definition_xrefs":["Orphanet:658"],"direct_ancestors":[{"relation_name":"is_a","term_name":"allergic urticaria","termid":"MONDO:0006526"},{"relation_name":"is_a","term_name":"angioedema","termid":"MONDO:0010481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"non-histaminic angioedema","secondary_identifiers":["GARD:18701","SCTID:41291007","ICD9:995.1"],"synonyms":[{"name":"angioneurotic edema","type":"exact"},{"name":"angioneurotic oedema","type":"exact"},{"name":"bradykinine-induced angioedema","type":"exact"},{"name":"non histamine-induced angioedema","type":"exact"}],"termid":"MONDO:0019013","xrefs":{"Monarch":{"xref_id":"0019013"}}}


id: GO:0016723
data:
  {"annotated_genes":["SJAG_04042","SJAG_04459"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76508,81006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030586"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction in which the metal ion is reduced and NAD+ or NADP+ acts as an electron acceptor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on metal ions","termid":"GO:0016722"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04042":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, acting on metal ions, NAD or NADP as acceptor","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["EC:1.16.1.-"],"synonyms":[{"name":"oxidoreductase activity, oxidizing metal ions, NAD or NADP as acceptor","type":"related"},{"name":"oxidoreductase activity, reducing metal ions, NAD or NADP as acceptor","type":"related"}],"termid":"GO:0016723","terms_by_termid":{"GO:0030586":null}}


id: PBO:0027120
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_azygotic_meiosis_I","termid":"PBO:0027120"}


id: PBO:0017648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human TMEM165 homolog, implicated in calcium tranport","termid":"PBO:0017648"}


id: PBO:0071783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein lateral stalk subunit P0 pseudogene 11","termid":"PBO:0071783"}


id: PBO:0028348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_CENP-A_containing_chromatin","termid":"PBO:0028348"}


id: PBO:0064379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 1","termid":"PBO:0064379"}


id: SO:0000061
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the nucleotide molecule, interacts selectively and non-covalently with polypeptide residues of a restriction enzyme.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease_binding_site","termid":"SO:0000059"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restriction_enzyme_binding_site","synonyms":[{"name":"restriction endonuclease binding site","type":"exact"},{"name":"restriction enzyme binding site","type":"exact"}],"termid":"SO:0000061"}


id: PBO:0017895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"farnesyldiphosphate:farnesyldiphosphatefarnesyltransferase (squalene synthase) Erg9","termid":"PBO:0017895"}


id: GO:0047086
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: O2 + NADPH + progesterone = H2O + NADP+ + testosterone acetate.","definition_xrefs":["EC:1.14.13.54","MetaCyc:1.14.13.54-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ketosteroid monooxygenase activity","synonyms":[{"name":"17alpha-hydroxyprogesterone, NADPH2:oxygen oxidoreductase (20-hydroxylating, side-chain cleaving)","type":"related"},{"name":"androstenedione, NADPH2:oxygen oxidoreductase (17-hydroxylating, lactonizing)","type":"related"},{"name":"ketosteroid,NADPH:oxygen oxidoreductase (20-hydroxylating, ester-producing/20-hydroxylating, side-chain cleaving/17-hydroxylating, lactonizing)","type":"related"},{"name":"progesterone, NADPH2:oxygen oxidoreductase (20-hydroxylating, ester-producing)","type":"related"},{"name":"steroid-ketone monooxygenase activity","type":"related"}],"termid":"GO:0047086"}


id: MONDO:1011061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic kidney disease that occurs in rabbit.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polycystic kidney disease, non-human animal","termid":"MONDO:1010262"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic kidney disease, rabbit","secondary_identifiers":["OMIA:000807-9986"],"termid":"MONDO:1011061","xrefs":{"Monarch":{"xref_id":"1011061"}}}


id: MONDO:0003461
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, benign, asymptomatic neoplasm that arises from the fallopian tube. The majority of cases are incidental findings during operation for an unrelated gynecologic disorder. The tumors are round and solitary and contain connective tissue and papillary or tubular structures lined by serous-type epithelium.","definition_xrefs":["NCIT:C40113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fallopian tube benign neoplasm","termid":"MONDO:0000645"},{"relation_name":"is_a","term_name":"serous adenofibroma","termid":"MONDO:0024886"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fallopian tube serous adenofibroma","secondary_identifiers":["UMLS:C1517109","DOID:5478","MEDGEN:309125"],"synonyms":[{"name":"fallopian tube adenofibroma","type":"exact"},{"name":"fallopian tube serous adenofibroma","type":"exact"},{"name":"serous adenofibroma of fallopian tube","type":"exact"}],"termid":"MONDO:0003461","xrefs":{"Monarch":{"xref_id":"0003461"}}}


id: MONDO:0021517
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the trachea.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system benign neoplasm","termid":"MONDO:0000382"},{"relation_name":"is_a","term_name":"trachea neoplasm","termid":"MONDO:0021210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of trachea","secondary_identifiers":["ICD10CM:D14.2","icd11.foundation:1396826912","ICD9:212.2","NCIT:C3602","SCTID:92446002","UMLS:C0153953","MEDGEN:56326"],"synonyms":[{"name":"benign neoplasm of the trachea","type":"exact"},{"name":"benign trachea neoplasm","type":"exact"},{"name":"benign trachea tumor","type":"exact"},{"name":"benign trachea tumour","type":"exact"},{"name":"benign tracheal neoplasm","type":"exact"},{"name":"benign tracheal tumor","type":"exact"},{"name":"benign tracheal tumour","type":"exact"},{"name":"benign tumor of the trachea","type":"exact"},{"name":"benign tumor of trachea","type":"exact"},{"name":"benign tumour of the trachea","type":"exact"},{"name":"benign tumour of trachea","type":"exact"},{"name":"trachea benign neoplasm","type":"exact"}],"termid":"MONDO:0021517","xrefs":{"Monarch":{"xref_id":"0021517"}}}


id: PBO:0055579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3015","termid":"PBO:0055579"}


id: GO:0030517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axon outgrowth.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell growth","termid":"GO:0030308"},{"relation_name":"is_a","term_name":"regulation of axon extension","termid":"GO:0030516"},{"relation_name":"is_a","term_name":"negative regulation of developmental growth","termid":"GO:0048640"},{"relation_name":"is_a","term_name":"negative regulation of axonogenesis","termid":"GO:0050771"},{"relation_name":"negatively_regulates","term_name":"axon extension","termid":"GO:0048675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axon extension","synonyms":[{"name":"down regulation of axon extension","type":"exact"},{"name":"down-regulation of axon extension","type":"exact"},{"name":"downregulation of axon extension","type":"exact"},{"name":"inhibition of axon extension","type":"narrow"}],"termid":"GO:0030517"}


id: GO:0045226
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of polysaccharides used in extracellular structures.","definition_xrefs":["GOC:go_curators","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete extracellular polysaccharide biosynthetic process (obsolete GO:0045226)","synonyms":[{"name":"extracellular polysaccharide anabolism","type":"exact"},{"name":"extracellular polysaccharide biosynthesis","type":"exact"},{"name":"extracellular polysaccharide formation","type":"exact"},{"name":"extracellular polysaccharide synthesis","type":"exact"}],"termid":"GO:0045226"}


id: GO:0000052
data:
  {"annotated_genes":["SJAG_00635"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019240"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving citrulline, N5-carbamoyl-L-ornithine, an alpha amino acid not found in proteins.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-proteinogenic amino acid metabolic process","termid":"GO:0170041"},{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00635":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"citrulline metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"citrulline metabolism","type":"exact"}],"termid":"GO:0000052","terms_by_termid":{"GO:0019240":null}}


id: MONDO:0015758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"T-cell non-Hodgkin lymphoma","termid":"MONDO:0015760"},{"relation_name":"is_a","term_name":"primary cutaneous lymphoma","termid":"MONDO:0018898"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005093"],"is_obsolete":false,"name":"primary cutaneous T-cell lymphoma","secondary_identifiers":["MESH:D016410","UMLS:C0079773","MEDGEN:36336","Orphanet:171901","GARD:6226","MedDRA:10011677"],"termid":"MONDO:0015758","xrefs":{"Monarch":{"xref_id":"0015758"}}}


id: MONDO:0003355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant smooth muscle neoplasm, arising from the ovary. It is characterized by a proliferation of neoplastic spindle cells.","definition_xrefs":["NCIT:C5234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian sarcoma","termid":"MONDO:0002225"},{"relation_name":"is_a","term_name":"leiomyosarcoma","termid":"MONDO:0005058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"ovary leiomyosarcoma","secondary_identifiers":["MEDGEN:233275","UMLS:C1335163","DOID:5263","EFO:0006718"],"synonyms":[{"name":"leiomyosarcoma of ovary","type":"exact"},{"name":"leiomyosarcoma of the ovary","type":"exact"},{"name":"ovarian leiomyosarcoma","type":"exact"},{"name":"ovary leiomyosarcoma","type":"exact"}],"termid":"MONDO:0003355","xrefs":{"Monarch":{"xref_id":"0003355"}}}


id: PBO:0071658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37a","termid":"PBO:0071658"}


id: MOD:00347
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-allo-threonine.","definition_xrefs":["PubMed:12696888","PubMed:3936839","RESID:AA0342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(S-L-cysteinyl)-D-allo-threonine","synonyms":[{"name":"(2R,5S,6R)-2,5-diamino-5-carboxy-6-hydroxy-4-thiaheptanoic acid","type":"exact"},{"name":"(2S,3R)-2-amino-2-[(2R)-2-amino-2-carboxyethyl]sulfanyl-3-hydroxybutanoic acid","type":"exact"},{"name":"2-(L-cystein-S-yl)-D-allo-threonine","type":"exact"},{"name":"CROSSLNK 2-cysteinyl-D-allo-threonine (Cys-Thr)","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-allo-threonine","type":"exact"}],"termid":"MOD:00347"}


id: GO:0052457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of the production of nitric oxide as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont nitric oxide production (obsolete GO:0052457)","synonyms":[{"name":"modulation by organism of defense-related symbiont NO production","type":"exact"},{"name":"modulation by organism of defense-related symbiont nitric oxide production","type":"exact"}],"termid":"GO:0052457"}


id: MONDO:1012800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arthrogryposis multiplex congenita that occurs in cattle due to a mutation in the AGRN gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis multiplex congenita, cattle","termid":"MONDO:1011474"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis multiplex congenita, AGRN-related, cattle","secondary_identifiers":["OMIA:002135-9913"],"synonyms":[{"name":"BHAC","type":"exact"},{"name":"Bovine Hereditary Arthrogyposis Multiplex Congentia","type":"broad"},{"name":"curly calf syndrome","type":"related"}],"termid":"MONDO:1012800","xrefs":{"Monarch":{"xref_id":"1012800"}}}


id: GO:0047730
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanine + L-histidine + ATP = carnosine + ADP + phosphate + H+.","definition_xrefs":["RHEA:19297"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"carnosine synthase activity","secondary_identifiers":["MetaCyc:CARNOSINE-SYNTHASE-RXN","Reactome:R-HSA-6786245","EC:6.3.2.11"],"synonyms":[{"name":"L-histidine:beta-alanine ligase (AMP-forming)","type":"related"},{"name":"carnosine synthetase activity","type":"related"},{"name":"carnosine-anserine synthetase activity","type":"related"},{"name":"carnosine-homocarnosine synthetase activity","type":"related"},{"name":"homocarnosine-carnosine synthetase activity","type":"related"}],"termid":"GO:0047730"}


id: FYPO:0003588
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the increase in gross chromosomal rearrangements that normally results from processing arrested replication forks is enhanced, i.e. the incidence of rearrangement increases more than in wild type when an arrested fork is processed.","definition_xrefs":["PomBase:mah","PMID:23093942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal replication fork processing","termid":"FYPO:0003586"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000293","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased gross chromosomal rearrangement during replication fork processing","termid":"FYPO:0003588"}


id: PR:G2TRN2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- new9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRN2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein new9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC926.10","synonyms":[{"name":"Spom972h-new9","type":"exact"}],"termid":"PR:G2TRN2"}


id: FYPO:0007116
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein in the actomyosin contractile ring is lower than normal during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:23615450"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring","termid":"FYPO:0004736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0004803","FYPO:0000002","FYPO:0006551","FYPO:0001320","FYPO:0000631","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein level in actomyosin contractile ring during mitotic interphase","synonyms":[{"name":"decreased protein level in actomyosin contractile ring during interphase during vegetative growth","type":"exact"},{"name":"decreased protein level in actomyosin contractile ring during interphase of mitotic cell cycle","type":"exact"},{"name":"decreased protein level in contractile ring during mitotic interphase","type":"exact"},{"name":"reduced protein level in actomyosin contractile ring during mitotic interphase","type":"exact"}],"termid":"FYPO:0007116"}


id: PBO:0026704
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_tyrosine_level","termid":"PBO:0026704"}


id: GO:0000372
data:
  {"annotated_genes":["SJAG_04738"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100093],"is_not":false,"summary":null,"term":"GO:0000372"}]},"cv_name":"biological_process","definition":"The splicing of Group I introns. This occurs by a ribozymic mechanism where the intron sequence forms a distinct 3D structure, characteristic of Group I introns and involved in determining the locations of the splice sites (there do not appear to be consensus splice site sequences) as well as having a role in catalyzing the splicing reactions, though protein factors are also required in vivo. Splicing occurs by a series of two transesterification reactions, generally with exogenous guanosine as the initiating nucleophile. The intron is excised as a linear piece (though it may subsequently circularize).","definition_xrefs":["GOC:krc","PMID:11377794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA splicing, via transesterification reactions with guanosine as nucleophile","termid":"GO:0000376"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04738":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"Group I intron splicing","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mRNA splicing","type":"related"}],"termid":"GO:0000372","terms_by_termid":{"GO:0000372":null}}


id: MONDO:0009177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"junctional epidermolysis bullosa","termid":"MONDO:0017612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"late-onset localized junctional epidermolysis bullosa-intellectual disability syndrome","secondary_identifiers":["UMLS:C1856969","GARD:299","MEDGEN:341663","OMIM:226440","Orphanet:231556","MESH:C535492"],"synonyms":[{"name":"epidermolysis bullosa simplex localisata associated with anodontia, hair and nail disorders","type":"related"},{"name":"epidermolysis bullosa, late-onset localised junctional, with intellectual disability","type":"related"},{"name":"epidermolysis bullosa, late-onset localised junctional, with mental retardation","type":"related"},{"name":"epidermolysis bullosa, late-onset localized junctional, with intellectual disability","type":"related"},{"name":"epidermolysis bullosa, late-onset localized junctional, with mental retardation","type":"related"}],"termid":"MONDO:0009177","xrefs":{"Monarch":{"xref_id":"0009177"}}}


id: GO:0004690
data:
  {"annotated_genes":["SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75302],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004691"}]},"cv_name":"molecular_function","definition":"cNMP-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016301","GO:0016740","GO:0003674","GO:0004672"],"is_obsolete":false,"name":"cyclic nucleotide-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0004690","terms_by_termid":{"GO:0004691":null}}


id: PBO:0054506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1906","termid":"PBO:0054506"}


id: GO:0018664
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: benzoate + H+ + NADPH + O2 = 4-hydroxybenzoate + H2O + NADP+.","definition_xrefs":["EC:1.14.14.92","RHEA:18033"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"benzoate 4-monooxygenase activity","secondary_identifiers":["MetaCyc:BENZOATE-4-MONOOXYGENASE-RXN","UM-BBD_reactionID:r0623","KEGG_REACTION:R01295"],"synonyms":[{"name":"4-hydroxybenzoic hydroxylase activity","type":"exact"},{"name":"benzoate 4-hydroxylase activity","type":"related"},{"name":"benzoate,NADPH:oxygen oxidoreductase (4-hydroxylating)","type":"related"},{"name":"benzoate-p-hydroxylase activity","type":"related"},{"name":"benzoate-para-hydroxylase activity","type":"related"},{"name":"benzoic 4-hydroxylase activity","type":"related"},{"name":"benzoic acid 4-hydroxylase activity","type":"related"},{"name":"p-hydroxybenzoate hydroxylase activity","type":"related"}],"termid":"GO:0018664"}


id: GO:1990776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an angiotensin stimulus. Angiotensin is any of three physiologically active peptides (angiotensin II, III, or IV) processed from angiotensinogen.","definition_xrefs":["PMID:22982863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to peptide hormone","termid":"GO:0043434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to angiotensin","termid":"GO:1990776"}


id: MONDO:0859154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"popliteal pterygium syndrome","termid":"MONDO:0017435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bartsocas-Papas syndrome 2","secondary_identifiers":["UMLS:C5543445","GARD:16444","OMIM:619339","MEDGEN:1778443"],"termid":"MONDO:0859154","xrefs":{"Monarch":{"xref_id":"0859154"}}}


id: PBO:0048479
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosaminyl (N-acetyl) transferase 2 (I blood group)","termid":"PBO:0048479"}


id: PBO:0064609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POU class 4 homeobox 3","termid":"PBO:0064609"}


id: GO:0097098
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"An activity that facilitates the base-pairing of single-stranded RNA to double-stranded DNA resulting in the formation of R-loops.","definition_xrefs":["GOC:imk","PMID:21699496"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA/RNA hybrid binding","termid":"GO:0071667"},{"relation_name":"is_a","term_name":"annealing activity","termid":"GO:0140666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"DNA/RNA hybrid annealing activity","termid":"GO:0097098"}


id: GO:0140490
data:
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id: GO:0090541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a MIT protein domain. The MIT domain is found in vacuolar sorting proteins, spastin (probable ATPase involved in the assembly or function of nuclear protein complexes), and a sorting nexin, which may play a role in intracellular trafficking.","definition_xrefs":["InterPro:IPR007330","GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"MIT domain binding","termid":"GO:0090541"}


id: FYPO:0007298
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation is abnormal. Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal protein aggregate center formation","synonyms":[{"name":"abnormal PAC formation","type":"exact"},{"name":"abnormal protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"abnormal protein aggregate center formation during vegetative growth","type":"exact"},{"name":"abnormal protein aggregate centre formation","type":"exact"}],"termid":"FYPO:0007298"}


id: GO:0030674
data:
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id: GO:0001112
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the melting of the DNA hybrid of the core promoter region within the transcriptional closed complex of an RNA polymerase preinitiation complex (PIC) to produce an open complex where the DNA duplex around the transcription initiation site is unwound to form the transcription bubble.","definition_xrefs":["PMID:15020047","PMID:18280161","GOC:txnOH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-DNA complex remodeling","termid":"GO:0001120"},{"relation_name":"part_of","term_name":"DNA-templated transcription initiation","termid":"GO:0006352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006351","GO:0010467"],"is_obsolete":false,"name":"DNA-templated transcription open complex formation","secondary_identifiers":["GO:0001127"],"synonyms":[{"name":"DNA-dependent transcriptional open complex formation","type":"exact"},{"name":"DNA-templated transcriptional open complex formation","type":"exact"},{"name":"promoter melting","type":"broad"},{"name":"transcription open complex formation at bacterial-type RNA polymerase promoter","type":"narrow"},{"name":"transcriptional open complex formation at bacterial-type RNA polymerase promoter","type":"narrow"}],"termid":"GO:0001112"}


id: PBO:0079217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiosulfate sulfurtransferase like domain containing 2","termid":"PBO:0079217"}


id: GO:0102294
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + NAD+ = cholest-5-en-3-one + NADH + H+.","definition_xrefs":["RHEA:35459"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-beta-hydroxy-Delta5-steroid dehydrogenase (NAD+) activity","termid":"GO:0003854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"cholesterol dehydrogenase (NAD+) activity","secondary_identifiers":["MetaCyc:RXN-12693"],"termid":"GO:0102294"}


id: MONDO:0100556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of rare movement and seizure disorders caused by changes (disease-causing variants or mutations) in the PRRT2 gene. They include a spectrum of specific disorders including paroxysmal kinesigenic dyskinesia (PKD), benign familial infantile epilepsy (BFIE), paroxysmal kinesigenic dyskinesia with infantile convulsions (PKD/IC) and hemiplegic migraine (HM). In addition, PRRT2 pathogenic variants have been identified in other childhood-onset movement disorders and different types of seizure conditions, such as paroxysmal torticollis, episodic ataxia and familial paroxysmal non-kinesigenic dyskinesia. It’s important to note that these disorders can also have different genetic causes.","definition_xrefs":["PMID:32916768","PMID:33746883"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRRT2-associated paroxysmal movement disorder","termid":"MONDO:0100556","xrefs":{"Monarch":{"xref_id":"0100556"}}}


id: PBO:0068573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 24, pseudogene","termid":"PBO:0068573"}


id: PBO:0041363
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 4 open reading frame 17","termid":"PBO:0041363"}


id: MONDO:0016542
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare immune dysregulation disease with immunodeficiency characterized by severe, progressive infantile onset inflammatory bowel disease with pancolitis, perianal disease (ulceration, fistulae), recurrent respiratory, genitourinary and cutaneous infections, arthritis and a high risk of B-cell lymphoma.","definition_xrefs":["Orphanet:238569"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"IL10-related early-onset inflammatory bowel disease","secondary_identifiers":["NANDO:2200446","GARD:13016","MEDGEN:1661450","UMLS:C4749850"],"synonyms":[{"name":"IL10-related early-onset IBD","type":"exact"},{"name":"IL10-related early-onset inflammatory bowel disease","type":"exact"},{"name":"autosomal recessive early-onset IBD","type":"related"},{"name":"autosomal recessive early-onset inflammatory bowel disease","type":"related"},{"name":"immune dysregulation-inflammatory bowel disease-arthritis-recurrent infections syndrome","type":"exact"}],"termid":"MONDO:0016542","xrefs":{"Monarch":{"xref_id":"0016542"}}}


id: PBO:0003226
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Functional Homologue of Nce102","termid":"PBO:0003226"}


id: MOD:00343
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to N-methyl-L-tyrosine.","definition_xrefs":["DeltaMass:0","RESID:AA0338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated tyrosine","termid":"MOD:00718"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-tyrosine","synonyms":[{"name":"(2S)-3-(4-hydroxyphenyl)-2-(methylamino)propanoic acid","type":"exact"},{"name":"MOD_RES N-methyltyrosine","type":"exact"},{"name":"Methyl","type":"related"},{"name":"N-methyl Tyrosinyl","type":"exact"},{"name":"N-methyl-L-tyrosine","type":"exact"},{"name":"N-methylated L-tyrosine","type":"exact"},{"name":"N-methyltyrosine","type":"exact"},{"name":"NMe1Tyr","type":"exact"}],"termid":"MOD:00343"}


id: MONDO:0010046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 23 (SPG23) is a rare, complex type of hereditary spastic paraplegia that presents in childhood with progressive spastic paraplegia, associated with peripheral neuropathy, skin pigment abnormalities (i.e. vitiligo, hyperpigmentation, diffuse lentigines), premature graying of hair, and characteristic facies (i.e. thin with ''sharp'' features). The SPG23 phenotype has been mapped to a locus on chromosome 1q24-q32.","definition_xrefs":["Orphanet:101003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 23","secondary_identifiers":["OMIM:270750","SCTID:726608002","DOID:0110774","GARD:336","MEDGEN:167094","UMLS:C0796019","MESH:C536859"],"synonyms":[{"name":"DSTYK autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"Lison syndrome","type":"exact"},{"name":"SPG 23","type":"related"},{"name":"SPG23","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in DSTYK","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 23","type":"related"},{"name":"hereditary spastic paraplegia type 23","type":"exact"},{"name":"spastic paraparesis, vitiligo, premature graying, characteristic facies","type":"related"},{"name":"spastic paraparesis-vitiligo-premature graying-characteristic facies syndrome","type":"exact"},{"name":"spastic paraplegia 23","type":"exact"},{"name":"spastic paraplegia and pigmentary abnormalities","type":"related"},{"name":"spastic paraplegia vitiligo premature graying and characteristic facies","type":"related"},{"name":"spastic paraplegia vitiligo premature greying and characteristic facies","type":"related"},{"name":"spastic paraplegia with pigmentary abnormalities","type":"exact"}],"termid":"MONDO:0010046","xrefs":{"Monarch":{"xref_id":"0010046"}}}


id: GO:0140183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which an organism promotes the narrowing (constriction) of blood vessels, by inhibiting the widening (dilation) of blood vessels in another organism via the action of a venom that activates endothelin receptor signaling pathway, concomittantly increasing blood pressure in the bitten/stung organism.","definition_xrefs":["PMID:16277978"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venom-mediated activation of G protein-coupled receptor signaling pathway","termid":"GO:0044514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"venom-mediated vasoconstriction via activation of endothelin receptor signaling pathway","synonyms":[{"name":"venom-mediated vasoconstriction via activation of endothelin signaling pathway","type":"exact"},{"name":"venom-mediated vasoconstriction via activation of endothelin-dependent signaling","type":"exact"},{"name":"venom-mediated vasoconstriction via endothelin receptor agonism","type":"exact"}],"termid":"GO:0140183"}


id: MONDO:0006074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma composed of malignant glandular cells and malignant squamous cells.","definition_xrefs":["NCIT:C3727"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous carcinoma","secondary_identifiers":["EFO:1000073","ICDO:8560/3","icd11.foundation:1793155313","MESH:D018196","DOID:4830","MEDGEN:104901","SCTID:403902008","UMLS:C0206623"],"synonyms":[{"name":"adenosquamous carcinoma","type":"exact"},{"name":"adenosquamous carcinoma (morphologic abnormality)","type":"exact"},{"name":"adenosquamous cell carcinoma","type":"exact"},{"name":"carcinoma, adenosquamous, malignant","type":"exact"},{"name":"mixed adenocarcinoma and epidermoid carcinoma","type":"exact"},{"name":"mixed adenocarcinoma and epidermoid cell carcinoma","type":"exact"},{"name":"mixed adenocarcinoma and squamous carcinoma","type":"exact"},{"name":"mixed adenocarcinoma and squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0006074","xrefs":{"Monarch":{"xref_id":"0006074"}}}


id: GO:0099556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling between presynapse and postsynapse, via the release and reception of carbon monoxide molecules, that modulates the synaptic transmission properties of the synapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trans-synaptic signaling by carbon monoxide","termid":"GO:0099549"},{"relation_name":"is_a","term_name":"trans-synaptic signaling by soluble gas, modulating synaptic transmission","termid":"GO:0099554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"trans-synaptic signaling by carbon monoxide, modulating synaptic transmission","termid":"GO:0099556"}


id: MONDO:0022872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"brain disorder","termid":"MONDO:0005560"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corpus callosum dysgenesis X-linked recessive","termid":"MONDO:0022872","xrefs":{"Monarch":{"xref_id":"0022872"}}}


id: MOD:01106
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tryptophan residue to N-formyl-L-tryptophan.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formyl-L-tryptophan","synonyms":[{"name":"formyl tryptophanyl","type":"exact"}],"termid":"MOD:01106"}


id: PATO:0001550
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity toward an external stimulus which is lower than normal/average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"sensitive toward","termid":"PATO:0000516"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased sensitivity toward","synonyms":[{"name":"decreased sensitivity","type":"exact"},{"name":"low sensitivity toward","type":"exact"}],"termid":"PATO:0001550"}


id: MONDO:0008943
data:
  {"annotated_genes":["SJAG_04641"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87142],"is_not":false,"summary":null,"term":"MONDO:0008943"}]},"cv_name":"mondo","definition":"The disorders involving primarily the cerebellar parenchyma have been classified into six forms. In cerebelloparenchymal disorder III, cerebellar ataxia is congenital (non-progressive) and characterized by cerebellar symptoms such as incoordination of gait often associated with poor coordination of hands, speech and eye movements. The other features are congenital mental retardation and hypotonia, in addition to other neurological and non-neurological features. MRI or CT scan show marked atrophy of the vermis and hemispheres. A severe loss of granule cells with heterotopic Purkinje cells is observed. The mode of inheritance in the few reported families is autosomal recessive. In one family, cerebellar ataxia was associated to albinism.: In a large inbred Lebanese family the disease locus was assigned to a 12.1-cM interval on chromosome 9q34-qter between markers D9S67 and D9S312. The primary biochemical defect remains unknown. Up to now, the only treatment has consisted in early interventional therapies including intensive speech therapy and adequate stimulation and/or training.","definition_xrefs":["Orphanet:1170"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive congenital cerebellar ataxia","termid":"MONDO:0020043"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04641":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive spinocerebellar ataxia 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C565865","UMLS:C1859298","GARD:1199","OMIM:213200","SCTID:715369006","MEDGEN:349134","DOID:0080061"],"synonyms":[{"name":"CPD 3","type":"related"},{"name":"CPD3","type":"related"},{"name":"CPDIII","type":"related"},{"name":"PMPCA autosomal recessive congenital cerebellar ataxia","type":"exact"},{"name":"SCAR2","type":"exact"},{"name":"autosomal recessive cerebelloparenchymal disorder type 3","type":"related"},{"name":"autosomal recessive congenital cerebellar ataxia caused by mutation in PMPCA","type":"exact"},{"name":"autosomal recessive spinocerebellar ataxia type 2","type":"exact"},{"name":"cerebellar granular cell hypoplasia and intellectual disability, congenital","type":"related"},{"name":"cerebellar granular cell hypoplasia and mental retardation, congenital","type":"related"},{"name":"cerebellar hypoplasia, nonprogressive Norman type","type":"related"},{"name":"cerebelloparenchymal disorder 3","type":"related"},{"name":"spinocerebellar ataxia, autosomal recessive 2","type":"related"}],"termid":"MONDO:0008943","terms_by_termid":{"MONDO:0008943":null},"xrefs":{"Monarch":{"xref_id":"0008943"}}}


id: PBO:0036131
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_CCR4-NOT_complex_binding","termid":"PBO:0036131"}


id: PBO:0038797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3A (pseudogene)","termid":"PBO:0038797"}


id: GO:0047960
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycine + H2O + NAD+ = glyoxylate + NH3 + NADH.","definition_xrefs":["EC:1.4.1.10","MetaCyc:GLYCINE-DEHYDROGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glycine dehydrogenase activity","secondary_identifiers":["RHEA:15721"],"synonyms":[{"name":"glycine:NAD+ oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0047960"}


id: GO:0150142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of CD86 biosynthetic process.","definition_xrefs":["GOC:aruk"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of CD86 production (obsolete GO:0150142)","synonyms":[{"name":"positive regulation of CD86 biosynthetic process","type":"exact"}],"termid":"GO:0150142"}


id: GO:0015940
data:
  {"annotated_genes":["SJAG_03679","SJAG_05200"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74321,79613],"is_not":false,"summary":null,"term":"GO:0015940"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pantothenate, the anion of pantothenic acid. It is a B complex vitamin that is a constituent of coenzyme A and is distributed ubiquitously in foods.","definition_xrefs":["GOC:ai","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pantothenate metabolic process","termid":"GO:0015939"},{"relation_name":"is_a","term_name":"water-soluble vitamin biosynthetic process","termid":"GO:0042364"},{"relation_name":"is_a","term_name":"modified amino acid biosynthetic process","termid":"GO:0042398"},{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03679":null,"SJAG_05200":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pantothenate biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["GO:0033317","GO:0033318"],"synonyms":[{"name":"pantothenate anabolism","type":"exact"},{"name":"pantothenate anabolism from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate anabolism from valine","type":"narrow"},{"name":"pantothenate biosynthesis","type":"exact"},{"name":"pantothenate biosynthesis from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate biosynthesis from valine","type":"narrow"},{"name":"pantothenate biosynthetic process from 2-dehydropantolactone","type":"narrow"},{"name":"pantothenate biosynthetic process from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate biosynthetic process from valine","type":"narrow"},{"name":"pantothenate formation","type":"exact"},{"name":"pantothenate formation from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate formation from valine","type":"narrow"},{"name":"pantothenate synthesis","type":"exact"},{"name":"pantothenate synthesis from 2-oxypantoyl lactone","type":"narrow"},{"name":"pantothenate synthesis from valine","type":"narrow"},{"name":"vitamin B5 biosynthesis","type":"exact"},{"name":"vitamin B5 biosynthetic process","type":"exact"}],"termid":"GO:0015940","terms_by_termid":{"GO:0015940":null}}


id: GO:0001057
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains an RNA polymerase IV specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete RNA polymerase IV activity (obsolete GO:0001057)","synonyms":[{"name":"DNA-directed RNA polymerase activity involved in transcription from RNA polymerase IV promoter","type":"exact"}],"termid":"GO:0001057"}


id: PR:000027572
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.2 that is encoded in the genome of Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:20929775","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fungal histone H3.2","termid":"PR:000027571"},{"relation_name":"is_a","term_name":"core histone (Schizosaccharomyces pombe)","termid":"PR:000041293"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"SPBC8D2.04, PI060","type":"related"},{"name":"Spom-hht2","type":"exact"}],"termid":"PR:000027572"}


id: GO:1990387
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of isogobliosides that begins with the synthesis of a tetrasaccharide core GalNAc-beta-1,3Gal-alpha-1,3Gal-beta-1,4Glc-ceramide. This core can be further elongated with the sequential addition of various carbohydrate units.","definition_xrefs":["PMID:35536927"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosphingolipid biosynthetic process","termid":"GO:0006688"},{"relation_name":"is_a","term_name":"ceramide biosynthetic process","termid":"GO:0046513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"isogloboside biosynthetic process","synonyms":[{"name":"isoglobo-series glycosphingolipid biosynthesis","type":"exact"}],"termid":"GO:1990387"}


id: GO:0072306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron in the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072041"},{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:0072304"},{"relation_name":"is_a","term_name":"positive regulation of mesenchymal cell apoptotic process involved in metanephros development","termid":"GO:1900213"},{"relation_name":"positively_regulates","term_name":"mesenchymal stem cell maintenance involved in metanephric nephron morphogenesis","termid":"GO:0072309"},{"relation_name":"positively_regulates","term_name":"mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","termid":"GO:1901147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of mesenchymal cell apoptotic process involved in metanephric nephron morphogenesis","synonyms":[{"name":"positive regulation of mesenchymal stem cell apoptosis involved in metanephric nephron morphogenesis","type":"narrow"},{"name":"positive regulation of mesenchymal stem cell apoptotic process involved in metanephric nephron morphogenesis","type":"exact"}],"termid":"GO:0072306"}


id: PBO:0044507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytohesin 3","termid":"PBO:0044507"}


id: PBO:0017496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFS family transmembrane transporter Mfs2 (predicted)","termid":"PBO:0017496"}


id: GO:0016936
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a glycoside in which the sugar group is galactose.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galactoside binding","termid":"GO:0016936"}


id: FYPO:0008284
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of myo-inositol in a cell is normal when the cell is in the vegetative growth phase of the life cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal cellular myo-inositol level","termid":"FYPO:0008284"}


id: FYPO:0003812
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleosome positioning is abnormal near the promoter regions of genes that are expressed in response to stress. Nucleosome positioning is the ordering of successions of nucleosomes into regular arrays so that nucleosomes are positioned at defined distances from one another.","definition_xrefs":["GO:0016584","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nucleosome positioning at protein-coding gene","termid":"FYPO:0007833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000641","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal nucleosome positioning at stress response genes","synonyms":[{"name":"abnormal nucleosome occupancy at stress response genes","type":"related"},{"name":"abnormal nucleosome positioning at stress response genes during mitotic cell cycle","type":"related"},{"name":"abnormal nucleosome positioning at stress response genes during vegetative growth","type":"exact"},{"name":"abnormal nucleosome spacing at stress response genes","type":"exact"}],"termid":"FYPO:0003812"}


id: GO:0033846
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + fluoride = 5'-deoxy-5'-fluoroadenosine + L-methionine.","definition_xrefs":["EC:2.5.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016765"],"is_obsolete":false,"name":"adenosyl-fluoride synthase activity","secondary_identifiers":["RHEA:16661","MetaCyc:2.5.1.63-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:fluoride adenosyltransferase activity","type":"related"},{"name":"fluorinase activity","type":"related"}],"termid":"GO:0033846"}


id: MONDO:0018081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemorrhagic fever with renal syndrome (HFRS) is a rodent-borne potentially severe hemorrhagic disease caused by Old World Hantaviruses characterized by high fever, malaise, headache, myalgia, arthralgia, backache, abdominal pain, oliguria/renal failure and systemic hemorrhagic manifestations.","definition_xrefs":["Orphanet:340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemorrhagic fever-renal syndrome","secondary_identifiers":["MESH:C535630","ICD10EXP:N08.0*","icd11.foundation:1059069619","GARD:18689","ICD10EXP:A98.5+","MEDGEN:42408","MedDRA:10023484","UMLS:C0019101"],"synonyms":[{"name":"Hantavirosis","type":"exact"},{"name":"Hantavirus fever","type":"exact"}],"termid":"MONDO:0018081","xrefs":{"Monarch":{"xref_id":"0018081"}}}


id: PBO:0069608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 885, pseudogene","termid":"PBO:0069608"}


id: MONDO:0003899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A myxoid chondrosarcoma occurring in adults.","definition_xrefs":["NCIT:C27378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myxoid chondrosarcoma","termid":"MONDO:0003681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult myxoid chondrosarcoma","secondary_identifiers":["DOID:6495","MEDGEN:312875","UMLS:C1706731"],"synonyms":[{"name":"adult myxoid chondrosarcoma","type":"exact"},{"name":"myxoid chondrosarcoma of adults","type":"exact"}],"termid":"MONDO:0003899","xrefs":{"Monarch":{"xref_id":"0003899"}}}


id: PBO:0028182
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_mercury","termid":"PBO:0028182"}


id: PBO:0028439
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_papuamide_B_during_mating","termid":"PBO:0028439"}


id: PBO:0047760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"folate receptor beta","termid":"PBO:0047760"}


id: MONDO:1010146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the CFAP46 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene","PMID:39362668"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CFAP46-related primary ciliary dyskinesia","synonyms":[{"name":"CFAP46-related primary ciliary dyskinesia","type":"exact"}],"termid":"MONDO:1010146","xrefs":{"Monarch":{"xref_id":"1010146"}}}


id: MONDO:0018464
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe phosphoribosylpyrophosphate (PRPP) synthetase superactivity is the severe and early-onset form of PRPP synthetase superactivity, an X-linked disorder of purine metabolism associated with hyperuricemia and hyperuricosuria, that is characterized by urolithiasis, gout and neurodevelopmental anomalies.","definition_xrefs":["Orphanet:411543"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoribosylpyrophosphate synthetase superactivity","termid":"MONDO:0010395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019254"}],"interesting_parent_ids":["MONDO:0019254","MONDO:0005066"],"is_obsolete":false,"name":"severe phosphoribosylpyrophosphate synthetase superactivity","secondary_identifiers":["UMLS:C5680017","MEDGEN:1843045","GARD:17682"],"synonyms":[{"name":"severe PRPP synthetase superactivity","type":"exact"},{"name":"severe PRPS1 superactivity","type":"exact"}],"termid":"MONDO:0018464","xrefs":{"Monarch":{"xref_id":"0018464"}}}


id: GO:0071287
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a manganese ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to manganese ion","termid":"GO:0010042"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to manganese ion","synonyms":[{"name":"cellular response to manganese","type":"exact"}],"termid":"GO:0071287"}


id: GO:1901412
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process from glutamate.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process from glutamate","termid":"GO:1901410"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole biosynthetic process","termid":"GO:1901465"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process from glutamate","termid":"GO:0033526"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0033013"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150","GO:0033013"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process from glutamate","synonyms":[{"name":"activation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process from glutamate","type":"narrow"},{"name":"activation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"activation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole formation from glutamate","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis from glutamate","type":"exact"}],"termid":"GO:1901412"}


id: PBO:0039286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG1 like 15, pseudogene","termid":"PBO:0039286"}


id: FYPO:0001687
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing benomyl.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0002060","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on benomyl","synonyms":[{"name":"normal cell population growth in presence of benomyl","type":"exact"},{"name":"normal cell population growth on benomyl","type":"exact"},{"name":"normal cell population growth on methyl benzimidazole-2-yl-carbamate","type":"exact"},{"name":"normal cellular response to benomyl","type":"related"},{"name":"normal growth on methyl [1-(butylcarbamoyl)-1H-benzimidazol-2-yl]carbamate","type":"exact"},{"name":"normal vegetative cell population growth on benomyl","type":"exact"}],"termid":"FYPO:0001687"}


id: MOD:00932
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Isotopic label","definition_xrefs":["PubMed:11821862","Unimod:499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"IDBEST tag for quantitation","synonyms":[{"name":"Heavy IDBEST tag for quantitation","type":"related"},{"name":"IGBP:13C(2)","type":"related"}],"termid":"MOD:00932"}


id: GO:0120227
data:
  {"annotated_genes":["SJAG_01458"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036042"}]},"cv_name":"molecular_function","definition":"Binding to an acyl-CoA, a thioester that results from the formal condensation of the thiol group of coenzyme A with the carboxy group of any carboxylic acid.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"nucleoside phosphate binding","termid":"GO:1901265"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"},{"relation_name":"is_a","term_name":"sulfur compound binding","termid":"GO:1901681"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01458":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"acyl-CoA binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"acyl binding","type":"broad"},{"name":"acyl-coenzyme A binding","type":"exact"}],"termid":"GO:0120227","terms_by_termid":{"GO:0036042":null}}


id: MONDO:0001944
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malaria that involves infection with more than one species of Plasmodium at the same time.","definition_xrefs":["PMID:15105024","DOID:14325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malaria","termid":"MONDO:0005136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"mixed malaria","secondary_identifiers":["ICD9:084.5","MEDGEN:509155","UMLS:C0153121","SCTID:21070001"],"synonyms":[{"name":"malaria by more than one parasite","type":"exact"},{"name":"malaria fever by more than one parasite","type":"exact"}],"termid":"MONDO:0001944","xrefs":{"Monarch":{"xref_id":"0001944"}}}


id: PATO:0000631
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being stretched out and lying at full length along the ground.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostrate","termid":"PATO:0000631"}


id: PBO:0003845
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BeLT","termid":"PBO:0003845"}


id: PBO:0069009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 253, pseudogene","termid":"PBO:0069009"}


id: MONDO:0006073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, slow growing neoplasm arising from tooth-forming tissues. The vast majority of cases are intraosseous and most often grow in the maxilla. It is characterized by the presence of odontogenic epithelium which is embedded in a connective tissue stroma. Local excision is curative and recurrences are very rare.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"oral cavity cancer","termid":"MONDO:0005515"},{"relation_name":"is_a","term_name":"benign neoplasm of oral cavity","termid":"MONDO:0021445"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenomatoid odontogenic tumor","secondary_identifiers":["NCIT:C4310","UMLS:C0334565","EFO:1000072","ICDO:9300/0","MEDGEN:137782","MESH:C538229"],"synonyms":[{"name":"adenomatoid odontogenic neoplasm","type":"exact"}],"termid":"MONDO:0006073","xrefs":{"Monarch":{"xref_id":"0006073"}}}


id: GO:0070017
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to thrombospondin.","definition_xrefs":["PMID:2478219"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"alphav-beta3 integrin-thrombospondin complex","synonyms":[{"name":"ITGAV-ITGB3-THBS1 complex","type":"narrow"}],"termid":"GO:0070017"}


id: PBO:0070969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 7","termid":"PBO:0070969"}


id: PBO:0080001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase10 pseudogene 2","termid":"PBO:0080001"}


id: GO:2001104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a heptasaccharideacetate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide transport","termid":"GO:0015772"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"heptasaccharide transport","termid":"GO:2001104"}


id: PBO:0087726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the SAS complex (Sas2p, Sas4p, Sas5p); acetylates free histones and nucleosomes and regulates transcriptional silencing; stimulates Sas2p HAT activity","termid":"PBO:0087726"}


id: PBO:0046399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPB41L4A antisense RNA 1","termid":"PBO:0046399"}


id: PR:Q09692
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tryptophan--tRNA ligase, cytoplasmic that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00220","PANTHER:PTHR10055:SF1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophan--tRNA ligase, cytoplasmic (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC2F7.13c","secondary_identifiers":["UniProtKB:Q09692"],"synonyms":[{"name":"Spom972h-WARS","type":"exact"},{"name":"TrpRS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tryptophanyl-tRNA synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09692"}


id: PBO:0030041
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_iron_starvation","termid":"PBO:0030041"}


id: GO:0075526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A transcription initiation process during which a nucleotide sequence between 10 and 20 nucleotides in size is cleaved from the 5' end of host mRNAs by a viral RNA-dependent polymerase. The capped leader sequence obtained is subsequently used to prime transcription on the viral genome, which ultimately leads to the synthesis of capped, translatable viral mRNAs.","definition_xrefs":["GOC:bf","VZ:839","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"negative stranded viral RNA transcription","termid":"GO:0039697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cap snatching","synonyms":[{"name":"cap snatching involved in viral mRNA transcription","type":"exact"}],"termid":"GO:0075526"}


id: GO:0032892
data:
  {"annotated_genes":["SJAG_04920","SJAG_02605","SJAG_03591","SJAG_05346","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[112591,95338,93756,100892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[100893,95339,93757],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organic acid transport","termid":"GO:0032890"},{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"positively_regulates","term_name":"organic acid transport","termid":"GO:0015849"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of organic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of organic acid transport","type":"narrow"},{"name":"stimulation of organic acid transport","type":"narrow"},{"name":"up regulation of organic acid transport","type":"exact"},{"name":"up-regulation of organic acid transport","type":"exact"},{"name":"upregulation of organic acid transport","type":"exact"}],"termid":"GO:0032892","terms_by_termid":{"GO:0035432":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: GO:0033272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of myo-inositol hexakisphosphate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"myo-inositol phosphate transport","termid":"GO:0033271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate transport","synonyms":[{"name":"phytate transport","type":"exact"}],"termid":"GO:0033272"}


id: PBO:0063261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 7","termid":"PBO:0063261"}


id: PBO:0069374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 634, pseudogene","termid":"PBO:0069374"}


id: PBO:0080029
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 17 like family member 15","termid":"PBO:0080029"}


id: PATO:0002458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer being thin and lacking outgrowths.","definition_xrefs":["PATOC:JL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pin-like","termid":"PATO:0002458"}


id: GO:0014835
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized satellite cell acquires specialized features of a myoblast. This occurs as part of skeletal muscle regeneration. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["CL:0000056","PMID:16607119","GOC:ef","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myoblast differentiation","termid":"GO:0045445"},{"relation_name":"part_of","term_name":"skeletal muscle tissue regeneration","termid":"GO:0043403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast differentiation involved in skeletal muscle regeneration","termid":"GO:0014835"}


id: PBO:0075230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 5","termid":"PBO:0075230"}


id: PBO:0088562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase DHRS3 family, implicated in lipid (isoprenoid) metabolism","termid":"PBO:0088562"}


id: PBO:0056421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCKS like 1 pseudogene 2","termid":"PBO:0056421"}


id: GO:0035152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that tracheal cells form and maintain tubular structures with the correct size and shape for their position in the network. This is essential for efficient flow of gases through the tracheal network.","definition_xrefs":["PMID:14570584","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"},{"relation_name":"part_of","term_name":"open tracheal system development","termid":"GO:0007424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube architecture, open tracheal system","synonyms":[{"name":"regulation of tracheal tube architecture","type":"exact"}],"termid":"GO:0035152"}


id: PBO:0089125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-14 family minus-end directed microtubule motor Pkl1","termid":"PBO:0089125"}


id: PBO:0071849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 44","termid":"PBO:0071849"}


id: PBO:0003416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHREC complex subunit Mit1","termid":"PBO:0003416"}


id: GO:0106060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of exit from mitosis.","definition_xrefs":["GOC:al","PMID:11493649"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of meiotic cell cycle phase transition","termid":"GO:1901993"},{"relation_name":"regulates","term_name":"exit from meiosis","termid":"GO:1990947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of exit from meiosis","termid":"GO:0106060"}


id: SO:0001568
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that changes the process of splicing.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcript_variant","termid":"SO:0001576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing_variant","synonyms":[{"name":"Jannovar:splicing_variant","type":"exact"},{"name":"splicing variant","type":"exact"}],"termid":"SO:0001568"}


id: SO:0001051
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0001051 nested_region (obsolete SO:0001051)","termid":"SO:0001051"}


id: GO:0098771
data:
  {"annotated_genes":["SJAG_02019","SJAG_00668","SJAG_02968","SJAG_04675","SJAG_04743","SJAG_01713","SJAG_04870","SJAG_00232","SJAG_01007","SJAG_01694","SJAG_02883","SJAG_04185","SJAG_01000","SJAG_04028","SJAG_04698","SJAG_01400","SJAG_03850","SJAG_04757","SJAG_00822","SJAG_00328","SJAG_04584","SJAG_03793","SJAG_03644","SJAG_02834","SJAG_02399","SJAG_02532","SJAG_03401","SJAG_03061","SJAG_04607","SJAG_00222","SJAG_03667","SJAG_01541","SJAG_03879","SJAG_01353","SJAG_04096","SJAG_02578","SJAG_04760","SJAG_04167","SJAG_01990","SJAG_00802","SJAG_04867","SJAG_04403","SJAG_02474","SJAG_04242","SJAG_04892","SJAG_01435","SJAG_02240","SJAG_00923","SJAG_04111","SJAG_04031","SJAG_02457","SJAG_03519","SJAG_05325","SJAG_00244","SJAG_04032","SJAG_01078","SJAG_00916","SJAG_00532","SJAG_04677","SJAG_03516","SJAG_03862","SJAG_03624","SJAG_00792","SJAG_03866","SJAG_01004","SJAG_03631","SJAG_01803","SJAG_03528","SJAG_02735","SJAG_02080","SJAG_02847"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59859,114852,79666,96120,102507],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0010106"},{"annotations":[75368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055064"},{"annotations":[72745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032468"},{"annotations":[101933,73393,75612,82126,110838,72073,120655,75546,73041,75466,80355,74371,77115,100119,115418,82173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006874"},{"annotations":[102181,109888,76998,79987,95145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006878"},{"annotations":[79988,80123,106276,94314,76230,96066,73120,77707,59512,76999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006879"},{"annotations":[72257,76441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010961"},{"annotations":[77705,75648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030026"},{"annotations":[111075,104612,90720,109609,104611,94146,109729,104610,99193,117107,64262],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030643"},{"annotations":[80043,101934,72623,74174,97450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030007"},{"annotations":[106191,76134,77858,79142,96735,102182,80250,76695,106331,116402,74753,105589],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006882"},{"annotations":[105800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033212"},{"annotations":[115268],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098711"},{"annotations":[57956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010960"},{"annotations":[75369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0055075"},{"annotations":[79664,94458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033215"},{"annotations":[71272,62848,63175],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033214"}]},"cv_name":"biological_process","definition":"Any 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id: PBO:0070686
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id: GO:0016791
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id: PBO:0043362
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id: MOD:01375
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id: FYPO:0001785
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id: MONDO:0011442
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id: GO:0001561
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id: GO:0097384
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id: PBO:0026714
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id: PBO:0066494
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id: PBO:0090867
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id: GO:0035000
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id: MONDO:0014469
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive nonsyndromic deafness in which the cause of the disease is a mutation in the CLIC5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hearing loss, autosomal recessive","termid":"MONDO:0019588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019497"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive nonsyndromic hearing loss 103","secondary_identifiers":["UMLS:C4015050","GARD:22653","DOID:0110464","MEDGEN:863487","OMIM:616042"],"synonyms":[{"name":"CLIC5 autosomal recessive nonsyndromic deafness","type":"narrow"},{"name":"DFNB103","type":"narrow"},{"name":"autosomal recessive deafness 103","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness 103","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness caused by mutation in CLIC5","type":"narrow"},{"name":"autosomal recessive nonsyndromic deafness type 103","type":"narrow"},{"name":"deafness, autosomal recessive 103","type":"narrow"},{"name":"deafness, autosomal recessive type 103","type":"narrow"}],"termid":"MONDO:0014469","xrefs":{"Monarch":{"xref_id":"0014469"}}}


id: GO:0160204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The binding activity of a molecule that brings together two mitochondrion membranes via membrane lipid binding or by interacting with a mitochondrial outer membrane protein, to establish or maintain the localization of the mitochondrion.","definition_xrefs":["PMID:38843396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-membrane adaptor activity","termid":"GO:0043495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0060090"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0030674"],"is_obsolete":false,"name":"mitochondrion-mitochondrion outer membrane tether activity","synonyms":[{"name":"mitochondrion membrane tether activity","type":"related"},{"name":"mitochondrion outer membrane tether activity","type":"related"}],"termid":"GO:0160204"}


id: MONDO:0001933
data:
  {"annotated_genes":["SJAG_04334","SJAG_04495","SJAG_02426","SJAG_03266","SJAG_02000","SJAG_04394","SJAG_00214","SJAG_02013","SJAG_03247","SJAG_02012","SJAG_00092","SJAG_04206"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89355,89354],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014488"},{"annotations":[88473,88474],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011236"},{"annotations":[88810],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011717"},{"annotations":[89276],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014674"},{"annotations":[87118,87119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007453"},{"annotations":[88393,88394],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100165"},{"annotations":[87114,87115,89278,87116,89279,87113,87117,89280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0005148"}]},"cv_name":"mondo","definition":"A disease involving the endocrine pancreas.","direct_ancestors":[{"relation_name":"is_a","term_name":"pancreas disorder","termid":"MONDO:0002356"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00092":null,"SJAG_00214":null,"SJAG_02000":null,"SJAG_02012":null,"SJAG_02013":null,"SJAG_02426":null,"SJAG_03247":null,"SJAG_03266":null,"SJAG_04206":null,"SJAG_04334":null,"SJAG_04394":null,"SJAG_04495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"endocrine pancreas disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:251","SCTID:17346000","UMLS:C0271633","MEDGEN:124407","DOID:1428","NCIT:C27067"],"synonyms":[{"name":"disease of endocrine pancreas","type":"exact"},{"name":"disease or disorder of endocrine pancreas","type":"exact"},{"name":"disorder of endocrine pancreas","type":"exact"},{"name":"disorder of islets of langerhans","type":"related"},{"name":"disorder of pancreatic islets","type":"related"},{"name":"endocrine pancreas disease","type":"exact"},{"name":"endocrine pancreas disease or disorder","type":"exact"},{"name":"endocrine pancreas disorder","type":"exact"}],"termid":"MONDO:0001933","terms_by_termid":{"MONDO:0005148":null,"MONDO:0007453":null,"MONDO:0011236":null,"MONDO:0011717":null,"MONDO:0014488":null,"MONDO:0014674":null,"MONDO:0100165":null},"xrefs":{"Monarch":{"xref_id":"0001933"}}}


id: PBO:0031511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cell_population_growth_during_nitrogen_starvation","termid":"PBO:0031511"}


id: GO:2000367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of acrosomal vesicle exocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of calcium ion-dependent exocytosis","termid":"GO:0017158"},{"relation_name":"regulates","term_name":"acrosomal vesicle exocytosis","termid":"GO:0060478"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0016192"],"is_obsolete":false,"name":"regulation of acrosomal vesicle exocytosis","synonyms":[{"name":"regulation of acrosomal granule exocytosis","type":"related"},{"name":"regulation of acrosome exocytosis","type":"exact"}],"termid":"GO:2000367"}


id: GO:0006813
data:
  {"annotated_genes":["SJAG_04616","SJAG_01353","SJAG_02445","SJAG_04028","SJAG_03401","SJAG_02883","SJAG_04167","SJAG_04698"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140141"},{"annotations":[114402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097623"},{"annotations":[72622,74173],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990573"},{"annotations":[62039,57773,69024,81992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071805"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions (K+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metal ion transport","termid":"GO:0030001"}],"gene_count":8,"genes_by_uniquename":{"SJAG_01353":null,"SJAG_02445":null,"SJAG_02883":null,"SJAG_03401":null,"SJAG_04028":null,"SJAG_04167":null,"SJAG_04616":null,"SJAG_04698":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"potassium ion transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0071804","GO:0015458"],"synonyms":[{"name":"K+ conductance","type":"related"},{"name":"cellular potassium ion transport","type":"exact"},{"name":"low voltage-dependent potassium channel auxiliary protein activity","type":"related"},{"name":"low voltage-gated potassium channel auxiliary protein activity","type":"related"},{"name":"potassium conductance","type":"narrow"},{"name":"potassium ion conductance","type":"narrow"},{"name":"potassium transport","type":"related"},{"name":"sodium/potassium transport","type":"broad"}],"termid":"GO:0006813","terms_by_termid":{"GO:0071805":null,"GO:0097623":null,"GO:0140141":null,"GO:1990573":null}}


id: MONDO:0957779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with language delay and variable cognitive abnormalities","secondary_identifiers":["OMIM:620502","UMLS:C5882689","MEDGEN:1850358"],"termid":"MONDO:0957779","xrefs":{"Monarch":{"xref_id":"0957779"}}}


id: MONDO:0016638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital afibrinogenemia","termid":"MONDO:0008737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial hypodysfibrinogenemia","secondary_identifiers":["GARD:17202","MEDGEN:347987","Orphanet:248408","UMLS:C1859970"],"termid":"MONDO:0016638","xrefs":{"Monarch":{"xref_id":"0016638"}}}


id: GO:0070824
data:
  {"annotated_genes":["SJAG_02778","SJAG_03844","SJAG_00934","SJAG_03982"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73612,110195,114160,115345],"is_not":false,"summary":null,"term":"GO:0070824"}]},"cv_name":"cellular_component","definition":"A histone deacetylase complex that contains a core of four proteins -- Clr1, Clr2, Clr3, and Mit1 in fission yeast -- and localizes to all heterochromatic regions in the genome as well as some euchromatic sites. The complex is involved in regulating nucleosome positioning to assemble higher-order chromatin structures.","definition_xrefs":["PMID:17289569","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NuRD complex","termid":"GO:0016581"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00934":null,"SJAG_02778":null,"SJAG_03844":null,"SJAG_03982":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005654"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634","GO:0005694","GO:0005654"],"is_obsolete":false,"name":"SHREC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Snf2/HDAC containing repressor complex","type":"exact"},{"name":"Snf2/Hdac repressive complex","type":"exact"}],"termid":"GO:0070824","terms_by_termid":{"GO:0070824":null}}


id: GO:2000780
data:
  {"annotated_genes":["SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001033"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of double-strand break repair.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of double-strand break repair","termid":"GO:2000779"},{"relation_name":"negatively_regulates","term_name":"double-strand break repair","termid":"GO:0006302"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"negative regulation of double-strand break repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000780","terms_by_termid":{"GO:2001033":null}}


id: PBO:0017500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1445 family mitochondrial protein (predicted)","termid":"PBO:0017500"}


id: MONDO:0002815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden onset of inflammation of heart muscle with myocellular necrosis; this is generally secondary to an infectious cause, and patients often have a recent history of a flu-like illness.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myocarditis","termid":"MONDO:0004496"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"acute myocarditis","secondary_identifiers":["SCTID:46701001","UMLS:C0155686","ICD9:422","MEDGEN:102339","NCIT:C35206","ICD9:422.90","ICD10WHO:I40","ICD9:422.99","DOID:3951"],"synonyms":[{"name":"myocarditis, acute","type":"exact"}],"termid":"MONDO:0002815","xrefs":{"Monarch":{"xref_id":"0002815"}}}


id: PBO:0063150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POZ/BTB and AT hook containing zinc finger 1","termid":"PBO:0063150"}


id: MONDO:0020716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial thyroid dyshormonogenesis","termid":"MONDO:0010132"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"thyroid dyshormonogenesis 1","secondary_identifiers":["GARD:18188","UMLS:C1848805","OMIM:274400","DOID:0112185","MEDGEN:336422"],"synonyms":[{"name":"TDH1","type":"exact"},{"name":"familial thyroid dyshormonogenesis 1","type":"exact"},{"name":"hypothyroidism, congenital, due to dyshormonogenesis, 1","type":"exact"},{"name":"iodine accumulation, transport, or trapping defect","type":"exact"},{"name":"thyroid dyshormonogenesis type 1","type":"exact"},{"name":"thyroid hormonogenesis, genetic defect in, 1","type":"exact"}],"termid":"MONDO:0020716","xrefs":{"Monarch":{"xref_id":"0020716"}}}


id: _global:go_annotation_extension_relation
data:
  {"annotation_feature_type":"gene","cv_name":"external","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"go_annotation_extension_relation","secondary_identifiers":["GOREL:0000000"],"termid":"_global:go_annotation_extension_relation"}


id: FYPO:0002422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cell population phenotype in which all vegetative cells arising from a population of germinated spores are inviable, have an abnormal shape and undergo one or two rounds of cell division.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable vegetative cell population after spore germination, single or double cell division, abnormal cell shape (obsolete FYPO:0002422)","synonyms":[{"name":"inviable germinated spore population, single or double cell division, abnormal cell shape","type":"exact"},{"name":"inviable population of germinated spores, single or double cell division, abnormal cell shape","type":"exact"}],"termid":"FYPO:0002422"}


id: PR:Q9HFE4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBP16F5.08c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9HFE4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thiol-specific monooxygenase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP16F5.08c","synonyms":[{"name":"Spom972h-SPBP16F5.08c","type":"exact"},{"name":"flavin-dependent monooxygenase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9HFE4"}


id: PBO:0083102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA helicase and DNA-dependent ATPase; role in DNA repair and checkpoint recovery, in the proper timing of commitment to meiotic recombination and the Meiosis I to II transition; blocks trinucleotide repeat expansion; affects genome stability; disassembles Rad51p nucleoprotein filaments during meiotic recombination; stimulates Mus81p-Mms4p endonuclease activity independent of catalytic activity; ATPase and ssDNA translocating motor activities inhibited by Dmc1p; functional homolog of human RTEL1","termid":"PBO:0083102"}


id: GO:0140020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that possesses DNA methyltransferase activity.","definition_xrefs":["PMID:24947342","PMID:20939822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DNA methyltransferase complex","termid":"GO:0140020"}


id: PBO:0024797
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecularly_interacts_with","termid":"PBO:0024797"}


id: GO:0034152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 6 signaling pathway.","definition_xrefs":["GOC:add","PMID:17328678","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune system process","termid":"GO:0002683"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of toll-like receptor 6 signaling pathway","termid":"GO:0034151"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 6 signaling pathway","termid":"GO:0034150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 6 signaling pathway","synonyms":[{"name":"negative regulation of TLR6 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 6 signalling pathway","type":"exact"}],"termid":"GO:0034152"}


id: PBO:0056823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 14A","termid":"PBO:0056823"}


id: PBO:0032716
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_error-free_translesion_synthesis","termid":"PBO:0032716"}


id: FYPO:0004259
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which cell cycle regulation mediated by the mitotic G2 DNA damage checkpoint does not occur under conditions that normally trigger the checkpoint signaling and response. Normally, the mitotic G2 DNA damage checkpoint negatively regulates progression through the G2/M transition of the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah","GO:0007095","PMID:21098122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2 DNA damage checkpoint","termid":"FYPO:0004373"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0000631","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitotic G2 DNA damage checkpoint","synonyms":[{"name":"abolished G2 DNA damage checkpoint during mitotic cell cycle","type":"exact"},{"name":"abolished mitotic G2 DNA damage checkpoint activation","type":"related"},{"name":"abolished mitotic G2 DNA damage checkpoint during vegetative growth","type":"exact"},{"name":"abolished mitotic cell cycle G2/M transition DNA damage checkpoint","type":"exact"},{"name":"mitotic G2 DNA damage checkpoint abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004259"}


id: PBO:0064549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POM121 transmembrane nucleoporin like 11, pseudogene","termid":"PBO:0064549"}


id: GO:1905347
data:
  {"annotated_genes":["SJAG_00623","SJAG_01044"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81247,76292],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048476"}]},"cv_name":"cellular_component","definition":"A protein complex which is capable of endodeoxyribonuclease activity.","definition_xrefs":["GOC:bhm","GOC:TermGenie","GO_REF:0000088","PMID:18413719"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonuclease complex","termid":"GO:1905348"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00623":null,"SJAG_01044":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"endodeoxyribonuclease complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Mus81-Eme1 complex","type":"narrow"},{"name":"Mus81-Eme2 complex","type":"narrow"}],"termid":"GO:1905347","terms_by_termid":{"GO:0048476":null}}


id: MONDO:0018355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi-like syndrome","termid":"MONDO:0018354"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"SIM1-related Prader-Willi-like syndrome","secondary_identifiers":["Orphanet:398079","MEDGEN:1802084","UMLS:C5680040","GARD:21642"],"synonyms":[{"name":"PWS-like due to a point mutation","type":"related"},{"name":"PWS-like due to point mutation","type":"related"},{"name":"Prader-Willi-like syndrome due to a point mutation","type":"related"},{"name":"SIM1-related PWLS","type":"exact"}],"termid":"MONDO:0018355","xrefs":{"Monarch":{"xref_id":"0018355"}}}


id: PATO:0001913
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physiological state which is characterized by periods of high-frequency high amplitude electrical activity in neuronal tissue.","definition_xrefs":["PATOC:mb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physiological state","termid":"PATO:0001912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ictal","termid":"PATO:0001913"}


id: MOD:00174
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-glycyl-glycosylsphingolipidinositolethanolamine.","definition_xrefs":["PubMed:12626404","RESID:AA0165","PubMed:8404891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylsphingolipidinositolated residue","termid":"MOD:00466"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:00764","MOD:01155"],"is_obsolete":false,"name":"N-glycyl-glycosylsphingolipidinositolethanolamine","synonyms":[{"name":"GSIGly","type":"exact"},{"name":"LIPID GPI-like-anchor amidated glycine","type":"exact"},{"name":"N-glycyl-glycosylsphingolipidinositolethanolamine","type":"exact"}],"termid":"MOD:00174"}


id: SO:0002056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intronic splicing regulatory element that functions to recruit trans acting splicing factors suppress the transcription of the gene or genes they control.","definition_xrefs":["PMID:23241926","SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silencer","termid":"SO:0000625"},{"relation_name":"part_of","term_name":"intron","termid":"SO:0000188"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intronic_splicing_silencer","synonyms":[{"name":"ISS","type":"exact"},{"name":"intronic splicing silencer","type":"exact"}],"termid":"SO:0002056"}


id: GO:0007291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The resolution of the male germline syncytium or cyst into individual gametes by packaging each spermatid into its own plasma membrane.","definition_xrefs":["GOC:bf","PMID:9550716"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"cellularization","termid":"GO:0007349"},{"relation_name":"part_of","term_name":"spermatid development","termid":"GO:0007286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sperm individualization","termid":"GO:0007291"}


id: MONDO:0012571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any primary ciliary dyskinesia in which the cause of the disease is a mutation in the NME8 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary ciliary dyskinesia 6","secondary_identifiers":["GARD:15502","OMIM:610852","MESH:C567057","DOID:0110606","MEDGEN:370930","UMLS:C1970506"],"synonyms":[{"name":"CILD6","type":"exact"},{"name":"NME8 primary ciliary dyskinesia","type":"exact"},{"name":"ciliary dyskinesia, primary, 6","type":"related"},{"name":"ciliary dyskinesia, primary, type 6","type":"exact"},{"name":"primary ciliary dyskinesia caused by mutation in NME8","type":"exact"},{"name":"primary ciliary dyskinesia type 6","type":"exact"}],"termid":"MONDO:0012571","xrefs":{"Monarch":{"xref_id":"0012571"}}}


id: PBO:0085915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; may play a role in cell wall biosynthesis, mutants have abormal relative levels of mannose and glucose and have Gap1p sorting and transport defects; (GFP)-fusion protein localizes to the cytoplasm","termid":"PBO:0085915"}


id: GO:0071323
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a chitin stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chitin","termid":"GO:0010200"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"},{"relation_name":"is_a","term_name":"cellular response to oxygen-containing compound","termid":"GO:1901701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to chitin","termid":"GO:0071323"}


id: PBO:0046539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group E member 2","termid":"PBO:0046539"}


id: PBO:0065852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB11 family interacting protein 3","termid":"PBO:0065852"}


id: GO:0060249
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A homeostatic process involved in the maintenance of an internal steady state within a defined anatomical structure of an organism, including control of cellular proliferation and death and control of metabolic function. An anatomical structure is any biological entity that occupies space and is distinguished from its surroundings. Anatomical structures can be macroscopic such as a carpel, or microscopic such as an acrosome.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal-level homeostasis","termid":"GO:0048871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anatomical structure homeostasis","synonyms":[{"name":"anatomical structure maintenance","type":"exact"}],"termid":"GO:0060249"}


id: SO:0000089
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene located in kinetoplast sequence.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"kinetoplast","termid":"SO:0000741"},{"relation_name":"is_a","term_name":"mt_gene","termid":"SO:0000088"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetoplast_gene","synonyms":[{"name":"kinetoplast gene","type":"exact"}],"termid":"SO:0000089"}


id: PBO:0091279
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Copper-regulated Meiotic gene","termid":"PBO:0091279"}


id: MONDO:0958137
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoinflammatory disease, multisystem, with immune dysregulation, X-linked","termid":"MONDO:0957494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early-onset autoimmune disorder due to DOCK11 partial deficiency","secondary_identifiers":["MEDGEN:1864045","Orphanet:658946","UMLS:C5925146"],"termid":"MONDO:0958137","xrefs":{"Monarch":{"xref_id":"0958137"}}}


id: PBO:0110023
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Social Distancing Gene","termid":"PBO:0110023"}


id: PBO:0047083
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 136 member B, pseudogene","termid":"PBO:0047083"}


id: MONDO:0008315
data:
  {"annotated_genes":["SJAG_00997","SJAG_04885","SJAG_03131","SJAG_04884","SJAG_04287"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88617,88618,88616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0700275"},{"annotations":[89323,89324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013872"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant tumor involving the prostate gland. The vast majority are carcinomas.","definition_xrefs":["NCIT:C7378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic urogenital tumor (obsolete MONDO:0017130)","termid":"MONDO:0017130"},{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"},{"relation_name":"is_a","term_name":"prostate neoplasm","termid":"MONDO:0021259"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_03131":null,"SJAG_04287":null,"SJAG_04884":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD10CM:C61","MEDGEN:138169","SCTID:399068003","MESH:D011471","UMLS:C0376358","DOID:10283","ICD9:185"],"synonyms":[{"name":"NGP - new growth of prostate","type":"exact"},{"name":"cancer of prostate gland","type":"exact"},{"name":"hereditary prostate cancer","type":"narrow"},{"name":"malignant neoplasm of prostate","type":"exact"},{"name":"malignant neoplasm of prostate gland","type":"exact"},{"name":"malignant neoplasm of the prostate","type":"exact"},{"name":"malignant prostate gland neoplasm","type":"exact"},{"name":"malignant prostate neoplasm","type":"exact"},{"name":"malignant prostate tumor","type":"exact"},{"name":"malignant prostate tumour","type":"exact"},{"name":"malignant tumor of prostate","type":"exact"},{"name":"malignant tumor of the prostate","type":"exact"},{"name":"malignant tumour of prostate","type":"exact"},{"name":"malignant tumour of the prostate","type":"exact"},{"name":"prostate cancer, familial","type":"narrow"},{"name":"prostate gland cancer","type":"exact"},{"name":"prostate neoplasm","type":"broad"},{"name":"prostatic cancer","type":"exact"},{"name":"prostatic neoplasm","type":"broad"},{"name":"tumor of the prostate","type":"broad"},{"name":"tumour of the prostate","type":"broad"}],"termid":"MONDO:0008315","terms_by_termid":{"MONDO:0013872":null,"MONDO:0700275":null},"xrefs":{"Monarch":{"xref_id":"0008315"}}}


id: PBO:0061448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 3 group C member 2","termid":"PBO:0061448"}


id: GO:0045676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of R7 differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of compound eye photoreceptor cell differentiation","termid":"GO:0110116"},{"relation_name":"regulates","term_name":"R7 cell differentiation","termid":"GO:0045466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of R7 cell differentiation","termid":"GO:0045676"}


id: MONDO:0021449
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the stomach.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"gastric neoplasm","termid":"MONDO:0021085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of stomach","secondary_identifiers":["ICD10CM:D13.1","icd11.foundation:479576735","MEDGEN:57805","UMLS:C0153943","SCTID:92411005","ICD9:211.1","NCIT:C3599"],"synonyms":[{"name":"benign gastric neoplasm","type":"exact"},{"name":"benign gastric tumor","type":"exact"},{"name":"benign gastric tumors","type":"exact"},{"name":"benign gastric tumour","type":"exact"},{"name":"benign gastric tumours","type":"exact"},{"name":"benign neoplasm of the stomach","type":"exact"},{"name":"benign stomach neoplasms","type":"exact"},{"name":"benign stomach tumors","type":"exact"},{"name":"benign stomach tumours","type":"exact"},{"name":"benign tumor of stomach","type":"exact"},{"name":"benign tumor of the stomach","type":"exact"},{"name":"benign tumors of stomach","type":"exact"},{"name":"benign tumors of the stomach","type":"exact"},{"name":"benign tumour of stomach","type":"exact"},{"name":"benign tumour of the stomach","type":"exact"},{"name":"benign tumours of stomach","type":"exact"},{"name":"benign tumours of the stomach","type":"exact"},{"name":"gastric neoplasms, benign","type":"exact"},{"name":"gastric tumors, benign","type":"exact"},{"name":"stomach benign neoplasm","type":"exact"},{"name":"stomach neoplasms, benign","type":"exact"},{"name":"stomach tumors, benign","type":"exact"}],"termid":"MONDO:0021449","xrefs":{"Monarch":{"xref_id":"0021449"}}}


id: FYPO:0003231
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which methylation of lysine at position 9 of histone H3 at heterochromatin domains occurs to a lower extent than normal.","definition_xrefs":["PomBase:mah","PMID:24210919"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased histone H3-K9 methylation during vegetative growth","termid":"FYPO:0000872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"decreased histone H3-K9 methylation at heterochromatin domain during vegetative growth","synonyms":[{"name":"decreased histone H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at HOODs during vegetative growth","type":"exact"},{"name":"decreased histone H3-K9 methylation at heterochromatin domain during mitotic cell cycle","type":"related"},{"name":"decreased histone H3K9me at heterochromatin domain during vegetative growth","type":"exact"},{"name":"decreased histone lysine H3 K9 methylation at heterochromatin domain during vegetative growth","type":"exact"},{"name":"reduced histone H3-K9 methylation at heterochromatin domain during vegetative growth","type":"exact"}],"termid":"FYPO:0003231"}


id: MONDO:0100274
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of plasmalogen biosynthesis in which the cause of the disease is a mutation in the AGPS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of plasmalogens biosynthesis","termid":"MONDO:0017986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019053"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019053","MONDO:0002525"],"is_obsolete":false,"name":"alkylglycerone-phosphate synthase deficiency","synonyms":[{"name":"AGPS deficiency","type":"exact"},{"name":"alkylglycerone-phosphate synthase deficiency","type":"exact"}],"termid":"MONDO:0100274","xrefs":{"Monarch":{"xref_id":"0100274"}}}


id: GO:0075133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process in which a symbiont alters or subverts a calcium or calmodulin-mediated signal transduction in its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete symbiont-mediated perturbation of host calcium or calmodulin-mediated signal transduction (obsolete GO:0075133)","synonyms":[{"name":"modulation by symbiont of host Ca++ or calmodulin-mediated signal transduction","type":"exact"},{"name":"perturbation of host calcium or calmodulin-mediated signal transduction","type":"exact"}],"termid":"GO:0075133"}


id: PR:Q10074
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- avt3 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar amino acid transporter 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H1.09c","synonyms":[{"name":"Spom972h-avt3","type":"exact"}],"termid":"PR:Q10074"}


id: PBO:0087016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribonucleotide-diphosphate reductase (RNR), small subunit; the RNR complex catalyzes the rate-limiting step in dNTP synthesis and is regulated by DNA replication and DNA damage checkpoint pathways via localization of the small subunits; RNR2 has a paralog, RNR4, that arose from the whole genome duplication","termid":"PBO:0087016"}


id: GO:0048222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An extracellular matrix part that consists of cross-linked glycoproteins.","definition_xrefs":["PMID:18508691","GOC:mah","PMID:7048321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"primary cell wall","termid":"GO:0009530"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005618"],"is_obsolete":false,"name":"glycoprotein network","secondary_identifiers":["Wikipedia:Extensin"],"synonyms":[{"name":"extensin","type":"exact"}],"termid":"GO:0048222"}


id: PBO:0083749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential component of the TIM23 complex; with Tim23p, contributes to the architecture and function of the import channel; may link the import motor to the core Translocase of the Inner Mitochondrial membrane (TIM23 complex)","termid":"PBO:0083749"}


id: PBO:0038909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adhesion G protein-coupled receptor E4, pseudogene","termid":"PBO:0038909"}


id: PBO:0039796
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ArfGAP with RhoGAP domain, ankyrin repeat and PH domain 2","termid":"PBO:0039796"}


id: PBO:0055023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2438","termid":"PBO:0055023"}


id: MONDO:0008708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrocallosal syndrome (ACS) is a polymalformative syndrome characterized by agenesis of corpus callosum (CC), distal anomalies of limbs, minor craniofacial anomalies and intellectual deficit.","definition_xrefs":["Orphanet:36"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"},{"relation_name":"is_a","term_name":"KIF7-related ciliopathy","termid":"MONDO:0800463"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acrocallosal syndrome","secondary_identifiers":["DOID:9250","GARD:5721","MEDGEN:162915","SCTID:715951007","OMIM:200990","icd11.foundation:1286493807","MESH:D055673","NCIT:C84531","UMLS:C0796147"],"synonyms":[{"name":"ACLS","type":"exact"},{"name":"ACS","type":"exact"},{"name":"Joubert syndrome 12","type":"related"},{"name":"Joubert syndrome 12/15, digenic","type":"related"},{"name":"Schinzel acrocallosal syndrome","type":"exact"},{"name":"Schinzel syndrome 1","type":"exact"},{"name":"absence of corpus callosum with unusual facial appearance, mental deficiency, duplication of the halluces and polydactyly","type":"related"},{"name":"acrocallosal syndrome","type":"exact"},{"name":"acrocallosal syndrome, Schinzel type","type":"related"},{"name":"hallux Duplication, postaxial polydactyly, and absence of corpus callosum","type":"related"}],"termid":"MONDO:0008708","xrefs":{"Monarch":{"xref_id":"0008708"}}}


id: MONDO:8000019
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"},{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"},{"relation_name":"is_a","term_name":"inherited auditory system disease","termid":"MONDO:0037940"},{"relation_name":"is_a","term_name":"hereditary neuromuscular disease","termid":"MONDO:0100546"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertigo, benign recurrent, 1","secondary_identifiers":["UMLS:C2749845","MESH:C567620","MEDGEN:412807"],"synonyms":[{"name":"BRV1","type":"exact"},{"name":"vertigo, benign recurrent, 1","type":"exact"}],"termid":"MONDO:8000019","xrefs":{"Monarch":{"xref_id":"8000019"}}}


id: PBO:0067274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 352, pseudogene","termid":"PBO:0067274"}


id: GO:0030463
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cell aging (sensu Fungi) (obsolete GO:0030463)","synonyms":[{"name":"cell aging (sensu Fungi)","type":"exact"}],"termid":"GO:0030463"}


id: GO:0002434
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process directed at removing immune complexes from the body. Immune complexes are clusters of antibodies bound to antigen, to which complement may also be fixed, and which may precipitate or remain in solution.","definition_xrefs":["GOC:add","ISBN:068340007X","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune complex clearance","termid":"GO:0002434"}


id: GO:0090415
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7-hydroxymethyl chlorophyll a + 2 reduced ferredoxin + 2 H+ chlorophyll a + 2 oxidized ferredoxin + H2O.","definition_xrefs":["GOC:kad","PMID:21934147","RHEA:53544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, with an iron-sulfur protein as acceptor","termid":"GO:0052592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"7-hydroxymethyl chlorophyll a reductase activity","secondary_identifiers":["EC:1.17.7.2"],"termid":"GO:0090415"}


id: MOD:00620
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["PubMed:7856876","Unimod:301"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysteine monobromobimane derivative","synonyms":[{"name":"Bromobimane","type":"related"},{"name":"Monobromobimane derivative","type":"related"}],"termid":"MOD:00620"}


id: GO:0150174
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of phosphatidylcholine metabolic process.","definition_xrefs":["PMID:30074985","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phosphatidylcholine metabolic process","termid":"GO:0150172"},{"relation_name":"is_a","term_name":"negative regulation of phospholipid metabolic process","termid":"GO:1903726"},{"relation_name":"negatively_regulates","term_name":"phosphatidylcholine metabolic process","termid":"GO:0046470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"negative regulation of phosphatidylcholine metabolic process","termid":"GO:0150174"}


id: PBO:0043994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSGALNACT2 pseudogene 1","termid":"PBO:0043994"}


id: PBO:0048573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametogenetin","termid":"PBO:0048573"}


id: MONDO:0014726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Charcot-Marie-Tooth disease in which the cause of the disease is a mutation in the SPG11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease axonal type 2X","secondary_identifiers":["Orphanet:466775","GARD:17830","OMIM:616668","DOID:0110176","UMLS:C5569024","EFO:1001983","MEDGEN:1800447"],"synonyms":[{"name":"ARCMT2X","type":"exact"},{"name":"CMT2X","type":"exact"},{"name":"Charcot-Marie-Tooth disease caused by mutation in SPG11","type":"exact"},{"name":"Charcot-Marie-Tooth disease, axonal, autosomal recessive, type 2X","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2X","type":"related"},{"name":"Charcot-Marie-Tooth disease, axonal, type 2x","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy type 2X","type":"exact"},{"name":"Charcot-Marie-Tooth neuropathy, type 2X","type":"related"},{"name":"SPG11 Charcot-Marie-Tooth disease","type":"exact"},{"name":"autosomal recessive Charcot Marie Tooth disease type 2X","type":"related"},{"name":"autosomal recessive Charcot-Marie-Tooth disease type 2 due to SPG11 mutation","type":"exact"},{"name":"autosomal recessive Charcot-Marie-Tooth disease type 2X","type":"related"},{"name":"autosomal recessive axonal Charcot-Marie-Tooth disease type 2X","type":"exact"}],"termid":"MONDO:0014726","xrefs":{"Monarch":{"xref_id":"0014726"}}}


id: FYPO:0001635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-serine measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular serine level","synonyms":[{"name":"normal cellular L-serine level","type":"exact"},{"name":"normal cellular serine level during mitotic cell cycle","type":"related"},{"name":"normal cellular serine level during vegetative growth","type":"exact"},{"name":"normal level of serine in cell","type":"exact"}],"termid":"FYPO:0001635"}


id: PBO:0060562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurobeachin pseudogene 6","termid":"PBO:0060562"}


id: GO:1901048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by an extracellular ligand binding to a transforming growth factor beta receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription, that modulates the frequency, rate or extent of growth of the body of an organism so that it reaches its usual body size.","definition_xrefs":["GOC:kmv","PMID:9847239","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor signaling pathway involved in regulation of multicellular organism growth (obsolete GO:1901048)","synonyms":[{"name":"TGF-beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGF-beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"TGFbeta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signaling pathway of regulation of multicellular organism growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body growth","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of body size","type":"exact"},{"name":"transforming growth factor beta receptor signalling pathway of regulation of multicellular organism growth","type":"exact"}],"termid":"GO:1901048"}


id: GO:0034169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 10 signaling pathway.","definition_xrefs":["PMID:16551253","PMID:17328678","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 10 signaling pathway","termid":"GO:0034167"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 10 signaling pathway","termid":"GO:0034166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 10 signaling pathway","synonyms":[{"name":"positive regulation of TLR10 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 10 signalling pathway","type":"exact"}],"termid":"GO:0034169"}


id: PBO:0056016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM12 homolog","termid":"PBO:0056016"}


id: MONDO:0968976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with progressive movement abnormalities","secondary_identifiers":["UMLS:C5935606","OMIM:620785","MEDGEN:1861832"],"termid":"MONDO:0968976","xrefs":{"Monarch":{"xref_id":"0968976"}}}


id: PBO:0069586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 860, pseudogene","termid":"PBO:0069586"}


id: PBO:0085106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nuclear response regulator and transcription factor; physically interacts with the Tup1-Cyc8 complex and recruits Tup1p to its targets; part of a branched two-component signaling system; required for optimal induction of heat-shock genes in response to oxidative stress; involved in osmoregulation; relocalizes to the cytosol in response to hypoxia; SKN7 has a paralog, HMS2, that arose from the whole genome duplication","termid":"PBO:0085106"}


id: PBO:0030054
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_rhizoxin","termid":"PBO:0030054"}


id: GO:1902953
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ER to Golgi vesicle-mediated transport.","definition_xrefs":["GOC:TermGenie","GOC:sjp","GO_REF:0000058","PMID:17855360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of ER to Golgi vesicle-mediated transport","termid":"GO:0060628"},{"relation_name":"positively_regulates","term_name":"endoplasmic reticulum to Golgi vesicle-mediated transport","termid":"GO:0006888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of ER to Golgi vesicle-mediated transport","synonyms":[{"name":"activation of ER to Golgi transport","type":"narrow"},{"name":"activation of ER to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi transport","type":"narrow"},{"name":"activation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi transport","type":"narrow"},{"name":"activation of rough ER to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi transport","type":"narrow"},{"name":"activation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"narrow"},{"name":"positive regulation of ER to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"positive regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"positive regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of ER to Golgi transport","type":"exact"},{"name":"up regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of ER to Golgi transport","type":"exact"},{"name":"up-regulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"up-regulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"up-regulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of ER to Golgi transport","type":"exact"},{"name":"upregulation of ER to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi transport","type":"exact"},{"name":"upregulation of endoplasmic reticulum to Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough ER to cis-Golgi vesicle-mediated transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi transport","type":"exact"},{"name":"upregulation of rough endoplasmic reticulum to cis-Golgi vesicle-mediated transport","type":"exact"}],"termid":"GO:1902953"}


id: FYPO:0004974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which telomere localization, a process in which a telomere is transported to, and/or maintained in, a specific location, is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal telomere localization","termid":"FYPO:0004973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal telomere localization during mitotic interphase","synonyms":[{"name":"normal telomere localisation during mitotic interphase","type":"exact"},{"name":"normal telomere localization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal telomere localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"normal telomere tethering to nuclear periphery during mitotic interphase","type":"exact"}],"termid":"FYPO:0004974"}


id: PBO:0074997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 115-8","termid":"PBO:0074997"}


id: GO:0075315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of basidium development, a process that leads to the formation of basidium, a small, specialized club-shaped structure typically bearing four basidiospores at the tips of minute projections. The basidium is unique to basidiomycetes and distinguishes them from other kinds of fungi.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of basidium development","termid":"GO:0075314"},{"relation_name":"positively_regulates","term_name":"basidium development","termid":"GO:0075313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of basidium development","termid":"GO:0075315"}


id: PBO:0057115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIR200C and MIR141 host gene","termid":"PBO:0057115"}


id: MONDO:1010738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any severe combined immunodeficiency disease in dogs in which the cause of the disease is a mutation in the RAG1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency disease, dog","termid":"MONDO:1011596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"severe combined immunodeficiency disease, RAG1-related, dog","secondary_identifiers":["OMIA:001574-9615"],"synonyms":[{"name":"T-B-NK+ SCID","type":"exact"}],"termid":"MONDO:1010738","xrefs":{"Monarch":{"xref_id":"1010738"}}}


id: PBO:0086865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative serine/threonine protein kinase; implicated in the regulation of phospholipid asymmetry through the activation of phospholipid translocases (flippases); involved in the phosphorylation of upstream inhibitory kinase Ypk1p along with Fpk1p; has a redundant role in the cellular response to mating pheromone; KIN82 has a paralog, FPK1, that arose from the whole genome duplication","termid":"PBO:0086865"}


id: MONDO:0002100
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the cardiovascular system.","definition_xrefs":["NCIT:C114940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"cardiovascular neoplasm","termid":"MONDO:0024757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cardiovascular cancer","secondary_identifiers":["UMLS:C3898472","DOID:176","MEDGEN:858066"],"synonyms":[{"name":"cancer of cardiovascular system","type":"exact"},{"name":"cardiovascular neoplasm","type":"broad"},{"name":"cardiovascular system cancer","type":"exact"},{"name":"cardiovascular tumors","type":"exact"},{"name":"cardiovascular tumours","type":"exact"},{"name":"malignant cardiovascular neoplasm","type":"exact"},{"name":"malignant cardiovascular system neoplasm","type":"exact"},{"name":"malignant neoplasm of cardiovascular system","type":"exact"}],"termid":"MONDO:0002100","xrefs":{"Monarch":{"xref_id":"0002100"}}}


id: PBO:0048854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A1","termid":"PBO:0048854"}


id: MONDO:0850426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-cell lymphoma that is characterized by the abnormal rearrangement of two genes, MYC gene and either BCL2 or BCL6 genes.","definition_xrefs":["DOID:0081004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell neoplasm","termid":"MONDO:0004095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"high-grade B-cell lymphoma double-hit/triple-hit","termid":"MONDO:0850426","xrefs":{"Monarch":{"xref_id":"0850426"}}}


id: GO:1903882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:krc","GOC:TermGenie","GO_REF:0000058","PMID:20054338"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine-mediated signaling pathway","termid":"GO:0001960"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"negatively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"down regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"down-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"downregulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"inhibition of IL-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of IL-17-mediated signalling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"inhibition of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"negative regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"negative regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"negative regulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903882"}


id: MONDO:0008206
data:
  {"annotated_genes":["SJAG_02100"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89025],"is_not":false,"summary":null,"term":"MONDO:0008206"}]},"cv_name":"mondo","definition":"Benign paroxysmal tonic upgaze of childhood with ataxia is a rare paroxysmal movement disorder characterized by episodes of sustained, conjugate, upward deviation of the eyes and down beating saccades in attempted downgaze (with preserved horizontal eye movements) which is accompanied by ataxic symptomatology (unsteady gait, lack of balance and movement coordination disturbances) in an otherwise healthy individual. Bilateral vertical nystagmus is associated. Symptoms generally disappear spontaneously within 1-2 years after onset.","definition_xrefs":["Orphanet:1179"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02100":null},"genotype_count":0,"is_obsolete":false,"name":"benign paroxysmal tonic upgaze of childhood with ataxia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1868576","MEDGEN:401473","SCTID:763127004","OMIM:168885","GARD:4176","MESH:C566817"],"synonyms":[{"name":"Ouvrier Billson syndrome","type":"related"},{"name":"Ouvrier-Billson syndrome","type":"exact"},{"name":"paroxysmal tonic upgaze, benign childhood, with ataxia","type":"related"}],"termid":"MONDO:0008206","terms_by_termid":{"MONDO:0008206":null},"xrefs":{"Monarch":{"xref_id":"0008206"}}}


id: MONDO:0009268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease - ophthalmoplegia - cardiovascular calcification is a variant of Gaucher disease, also known as a Gaucher-like disease that is characterized by cardiac involvement.","definition_xrefs":["Orphanet:2072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Gaucher disease","termid":"MONDO:0018150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561","MONDO:0005328","MONDO:0002525"],"is_obsolete":false,"name":"Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome","secondary_identifiers":["MESH:C565553","UMLS:C1856476","MEDGEN:341563","OMIM:231005","SCTID:1156813002","DOID:0112250","GARD:12504"],"synonyms":[{"name":"Gaucher disease - ophthalmoplegia - cardiovascular calcification","type":"related"},{"name":"Gaucher disease type 3C","type":"exact"},{"name":"Gaucher disease, type 3C","type":"related"},{"name":"Gaucher disease, type IIIC","type":"related"},{"name":"Gaucher disease-ophthalmoplegia-cardiovascular calcification syndrome","type":"exact"},{"name":"Gaucher-like disease","type":"exact"},{"name":"cardiovascular Gaucher disease","type":"exact"},{"name":"pseudo Gaucher disease","type":"related"}],"termid":"MONDO:0009268","xrefs":{"Monarch":{"xref_id":"0009268"}}}


id: MONDO:0010914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The severe infantile form of carnitine palmitoyltransferase II (CPT II) deficiency, an inherited disorder that affects mitochondrial oxidation of long chain fatty acids (LCFA), is the early-onset form of the disease.","definition_xrefs":["Orphanet:228305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carnitine palmitoyltransferase II deficiency","termid":"MONDO:0015515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"carnitine palmitoyl transferase II deficiency, severe infantile form","secondary_identifiers":["GARD:17150","OMIM:600649","UMLS:C1833511","MESH:C563462","MEDGEN:322211"],"synonyms":[{"name":"CARNITINE PALMITOYLTRANSFERASE II deficiency, infantile","type":"related"},{"name":"CPT 2 deficiency, hepatic","type":"related"},{"name":"CPT II deficiency, infantile","type":"exact"},{"name":"CPT2, hepatocardiomuscular form","type":"exact"},{"name":"CPT2, severe infantile form","type":"exact"},{"name":"CPTII, hepatocardiomuscular form","type":"exact"},{"name":"CPTII, severe infantile form","type":"exact"},{"name":"Carnitine Palmitoyltransferase 2 deficiency with hypoketotic hypoglycemia","type":"related"},{"name":"Carnitine Palmitoyltransferase 2 deficiency, hepatocardiomuscular","type":"related"},{"name":"Carnitine Palmitoyltransferase 2 deficiency, infantile","type":"related"},{"name":"Carnitine palmitoyl transferase II deficiency, hepatocardiomuscular form","type":"exact"},{"name":"Carnitine palmitoyl transferase deficiency type 2, hepatocardiomuscular form","type":"exact"},{"name":"Carnitine palmitoyl transferase deficiency type 2, severe infantile form","type":"exact"},{"name":"Cpt2 deficiency, infantile","type":"related"},{"name":"carnitine palmitoyl transferase II deficiency, severe infantile form","type":"exact"}],"termid":"MONDO:0010914","xrefs":{"Monarch":{"xref_id":"0010914"}}}


id: GO:0004374
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reactions: glycine + lipoylprotein = S-aminomethyldihydrolipoylprotein + carbon dioxide (CO2), followed by S-aminomethyldihydrolipoylprotein + (6S)-tetrahydrofolate = dihydrolipoylprotein + (6R)-5,10-methylenetetrahydrofolate + ammonia. Made up of two components, aminomethyltransferase and glycine dehydrogenase (decarboxylating).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete glycine cleavage system (obsolete GO:0004374)","synonyms":[{"name":"glycine cleavage system","type":"exact"},{"name":"glycine synthase","type":"broad"}],"termid":"GO:0004374"}


id: PR:P50999
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A T-complex protein 1 subunit delta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02432","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T-complex protein 1 subunit delta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.06","secondary_identifiers":["UniProtKB:P50999"],"synonyms":[{"name":"CCT-delta (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CCT4","type":"exact"},{"name":"TCP-1-delta (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P50999"}


id: GO:0030433
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of steps necessary to target endoplasmic reticulum (ER)-resident proteins for degradation by the cytoplasmic proteasome. Begins with recognition of the ER-resident protein, includes retrotranslocation (dislocation) of the protein from the ER to the cytosol, protein ubiquitination necessary for correct substrate transfer, transport of the protein to the proteasome, and ends with degradation of the protein by the cytoplasmic proteasome.","definition_xrefs":["PMID:19520858","GOC:rb","PMID:14607247","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin-dependent ERAD pathway (obsolete GO:0030433)","termid":"GO:0030433"}


id: PBO:0027718
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_amino_acid_biosynthesis_gene_mRNA_during_vegetative_growth","termid":"PBO:0027718"}


id: MONDO:0700209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Strongylida infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"parasitic disease, non-human animal","termid":"MONDO:0024969"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Strongylida infectious disease, non-human animal","termid":"MONDO:0700209","xrefs":{"Monarch":{"xref_id":"0700209"}}}


id: GO:0120074
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell differentiation, the process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of an endocardial cushion cell.","definition_xrefs":["GOC:rph","GOC:BHF","GOC:BHF_miRNA"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of endocardial cushion cell differentiation","termid":"GO:0120074"}


id: PBO:0027403
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_tyrosine_phosphorylation_during_cellular_response_to_heat","termid":"PBO:0027403"}


id: GO:0021933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The inward migration of postmitotic granule cells along a radial glial cell from the external granule layer to the internal granule cell layer.","definition_xrefs":["PMID:15157725","GO_REF:0000021","GOC:cls","GOC:jid","GOC:dph","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hindbrain radial glia guided cell migration","termid":"GO:0021932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"radial glia guided migration of cerebellar granule cell","termid":"GO:0021933"}


id: GO:0035603
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals generated as a consequence of a fibroblast growth factor receptor binding to one of its physiological ligands, which contributes to hemopoiesis.","definition_xrefs":["GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fibroblast growth factor receptor signaling pathway","termid":"GO:0008543"},{"relation_name":"part_of","term_name":"hemopoiesis","termid":"GO:0030097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"fibroblast growth factor receptor signaling pathway involved in hemopoiesis","synonyms":[{"name":"FGF receptor signaling pathway involved in hematopoiesis","type":"exact"},{"name":"FGFR signaling pathway involved in hematopoiesis","type":"exact"},{"name":"fibroblast growth factor receptor signaling pathway involved in hematopoiesis","type":"exact"},{"name":"fibroblast growth factor receptor signalling pathway involved in hemopoiesis","type":"exact"}],"termid":"GO:0035603"}


id: PR:G2TRM3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.19 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRM3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C11D3.19 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.19","synonyms":[{"name":"Spom972h-SPAC11D3.19","type":"exact"}],"termid":"PR:G2TRM3"}


id: PBO:0069124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 374, pseudogene","termid":"PBO:0069124"}


id: MONDO:0009761
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign lymphatic neoplasm usually arising from the neck and characterized by cystic dilation of the lymphatic vessels.","definition_xrefs":["NCIT:C3724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"cystic hygroma","secondary_identifiers":["Orphanet:79486","UMLS:C0206620","EFO:1000888","GARD:6234","ICDO:9173/0","MedDRA:10058949","DOID:3081","SCTID:399882002","MESH:D018191","MEDGEN:60195","OMIM:257350"],"synonyms":[{"name":"cystic hygroma","type":"exact"},{"name":"cystic hygroma, fetal","type":"related"},{"name":"cystic hygroma, foetal","type":"related"},{"name":"cystic lymphangioma","type":"exact"},{"name":"hygroma","type":"exact"},{"name":"macrocystic lymphatic malformation","type":"related"},{"name":"nuchal bleb, familial","type":"related"}],"termid":"MONDO:0009761","xrefs":{"Monarch":{"xref_id":"0009761"}}}


id: MONDO:0100495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare myopathy characterized by weakness of the muscles of the anterior compartment of lower limbs. Described as a more severe tibial muscular dystrophy phenotype, distal titinopathy is associated with earlier onset and progression to include soleus muscle and proximal muscles.","definition_xrefs":["PMID:27796757","PMID:24395473"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive titinopathy","termid":"MONDO:0100493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005336","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive distal titinopathy","synonyms":[{"name":"distal titinopathy","type":"broad"}],"termid":"MONDO:0100495","xrefs":{"Monarch":{"xref_id":"0100495"}}}


id: GO:0045598
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of adipocyte differentiation.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"fat cell differentiation","termid":"GO:0045444"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of fat cell differentiation","synonyms":[{"name":"regulation of adipocyte cell differentiation","type":"exact"},{"name":"regulation of adipocyte differentiation","type":"exact"}],"termid":"GO:0045598"}


id: MOD:00594
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified resiues with a mass of 113.047678 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"},{"relation_name":"is_a","term_name":"residues isobaric at 113.0-113.1 Da","termid":"MOD:00624"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at 113.047678 Da","termid":"MOD:00594"}


id: PBO:0069740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1021, pseudogene","termid":"PBO:0069740"}


id: GO:0097447
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The entire complement of dendrites for a neuron, consisting of each primary dendrite and all its branches.","definition_xrefs":["GOC:bc","GOC:aruk","NIF_Subcellular:sao172297168"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection","termid":"GO:0043005"},{"relation_name":"part_of","term_name":"somatodendritic compartment","termid":"GO:0036477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dendritic tree","termid":"GO:0097447"}


id: GO:2000929
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellodextrin catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cellodextrin catabolic process","termid":"GO:2000927"},{"relation_name":"positively_regulates","term_name":"cellodextrin catabolic process","termid":"GO:2000890"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellodextrin catabolic process","synonyms":[{"name":"positive regulation of cellodextrin catabolism","type":"exact"}],"termid":"GO:2000929"}


id: PBO:0055268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2695","termid":"PBO:0055268"}


id: PBO:0041258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 putative open reading frame 220","termid":"PBO:0041258"}


id: PBO:0089081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation machinery associated protein ortholog Tma22","termid":"PBO:0089081"}


id: MONDO:0019684
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare bone disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare bone disease (obsolete MONDO:0019684)","secondary_identifiers":["Orphanet:93419"],"synonyms":[{"name":"rare bone disease","type":"exact"}],"termid":"MONDO:0019684","xrefs":{"Monarch":{"xref_id":"0019684"}}}


id: GO:1904272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-tryptophan from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:21097500","GO_REF:0000075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"L-tryptophan transmembrane transport","termid":"GO:1904556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"L-tryptophan import across plasma membrane","termid":"GO:1904272"}


id: PBO:0078587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60","termid":"PBO:0078587"}


id: MONDO:0021366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm (disease) that involves the middle ear.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"middle ear disorder","termid":"MONDO:0003276"},{"relation_name":"is_a","term_name":"ear neoplasm","termid":"MONDO:0021233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of middle ear","secondary_identifiers":["NCIT:C4412","ICD9:239.89","UMLS:C0345617","MEDGEN:87509","SCTID:127006003"],"synonyms":[{"name":"middle Ear neoplasm","type":"exact"},{"name":"middle Ear tumor","type":"exact"},{"name":"middle Ear tumour","type":"exact"},{"name":"middle ear neoplasm","type":"exact"},{"name":"middle ear neoplasm (disease)","type":"exact"},{"name":"middle ear tumor","type":"exact"},{"name":"middle ear tumour","type":"exact"},{"name":"neoplasm of middle ear","type":"exact"},{"name":"neoplasm of the middle Ear","type":"exact"},{"name":"tumor of middle Ear","type":"exact"},{"name":"tumor of middle ear","type":"exact"},{"name":"tumor of the middle Ear","type":"exact"},{"name":"tumour of middle Ear","type":"exact"},{"name":"tumour of middle ear","type":"exact"},{"name":"tumour of the middle Ear","type":"exact"}],"termid":"MONDO:0021366","xrefs":{"Monarch":{"xref_id":"0021366"}}}


id: PATO:0001962
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's edges of its surface being rolled inwards spirally on each side.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involute","termid":"PATO:0001962"}


id: GO:1900271
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of long-term synaptic potentiation.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synaptic plasticity","termid":"GO:0048167"},{"relation_name":"regulates","term_name":"long-term synaptic potentiation","termid":"GO:0060291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of long-term synaptic potentiation","synonyms":[{"name":"regulation of LTP","type":"related"},{"name":"regulation of long-term potentiation","type":"broad"}],"termid":"GO:1900271"}


id: PBO:0048971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerol-3-phosphate acyltransferase 2, mitochondrial","termid":"PBO:0048971"}


id: MONDO:0009859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phaver syndrome is a very rare syndrome characterized by the association of limb Pterygia, Heart anomalies, Autosomal recessive inheritance, Vertebral defects, Ear anomalies and Radial defects.","definition_xrefs":["Orphanet:2876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHAVER syndrome","secondary_identifiers":["SCTID:723453002","UMLS:C1849928","OMIM:261575","MESH:C538357","MEDGEN:376670","GARD:4465"],"synonyms":[{"name":"PHAVER syndrome","type":"exact"},{"name":"Powell-Chandra-Saal syndrome","type":"exact"},{"name":"pterygia heart defects autosomal recessive inheritance vertebral defects Ear anomalies and radial defects","type":"related"}],"termid":"MONDO:0009859","xrefs":{"Monarch":{"xref_id":"0009859"}}}


id: PBO:0072168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 5","termid":"PBO:0072168"}


id: MONDO:0000345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease caused by infection with Oropouche virus.","definition_xrefs":["MONDO:patterns/infectious_disease_by_agent"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bunyaviridae infectious disease","termid":"MONDO:0021641"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Oropouche fever","secondary_identifiers":["DOID:0050521","UMLS:C0276386","MEDGEN:547314","ICD10CM:A93.0","SCTID:72880002"],"synonyms":[{"name":"Oropouche virus caused disease or disorder","type":"exact"},{"name":"Oropouche virus disease or disorder","type":"exact"},{"name":"Oropouche virus infectious disease","type":"exact"}],"termid":"MONDO:0000345","xrefs":{"Monarch":{"xref_id":"0000345"}}}


id: GO:0120135
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the axoneme that is close to the tip of the cilium.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axoneme","termid":"GO:0005930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"distal portion of axoneme","synonyms":[{"name":"distal part of axoneme","type":"exact"}],"termid":"GO:0120135"}


id: PBO:0076199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO2 pseudogene 8","termid":"PBO:0076199"}


id: GO:0036484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The characteristic movement of trunk neural crest cells from the neural tube to other locations in the vertebrate embryo.","definition_xrefs":["GOC:PARL","GOC:bf","GOC:mat","PMID:2387238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell migration","termid":"GO:0001755"},{"relation_name":"part_of","term_name":"trunk segmentation","termid":"GO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trunk neural crest cell migration","synonyms":[{"name":"trunk NCC migration","type":"exact"}],"termid":"GO:0036484"}


id: FYPO:0000431
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal fermentation","termid":"FYPO:0000430"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished fermentation","synonyms":[{"name":"abolished fermentation during mitotic cell cycle","type":"related"},{"name":"absent fermentative metabolism","type":"exact"},{"name":"fermentation abolished","type":"exact"},{"name":"fermentation abolished during vegetative growth","type":"exact"},{"name":"fermentative metabolism abolished","type":"exact"},{"name":"fermentative metabolism: absent","type":"related"}],"termid":"FYPO:0000431"}


id: PBO:0064502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2D pseudogene 1","termid":"PBO:0064502"}


id: MONDO:0002296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glomus tumor (obsolete MONDO:0002296)","termid":"MONDO:0002296","xrefs":{"Monarch":{"xref_id":"0002296"}}}


id: PBO:0044133
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP1 divergent transcript","termid":"PBO:0044133"}


id: PBO:0075305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"suppressor of cytokine signaling 3","termid":"PBO:0075305"}


id: PBO:0064677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 13","termid":"PBO:0064677"}


id: PBO:0002776
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae VHT1","termid":"PBO:0002776"}


id: MONDO:0015914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Primary orthostatic hypotension is a rare type of orthostatic hypotension. It is not a disease per se, but a condition caused by several disorders that affect a specific part of the autonomic nervous system, such as multiple system atrophy, young-onset Parkinson's disease, pure autonomic failure, dopamine beta-hydroxylase deficiency, familial dysautonomia, and pure autonomic failure among others. The autonomic nervous system is the part of the nervous system that regulates certain involuntary body functions such as heart rate, blood pressure, sweating, and bowel and bladder control. Orthostatic hypotension is a form of low blood pressure that happens when standing-up from sitting or lying down. Common symptoms may include dizziness, lightheadedness, generalized weakness, leg buckling, nausea, blurry vision, fatigue, and headaches. Additional symptoms can include chest pain (angina), head and neck pain (often affecting neck and shoulders with a coat hanger distribution), decline in cognitive functioning such as difficulty concentrating, temporary loss of consciousness or “blackout”. Some people with primary orthostatic hypotension may also have high blood pressure when lying down. The treatment depends upon several factors including the specific underlying cause including The treatment depends upon several factors including the specific underlying cause and may include physical counter-maneuvers like lying down, sitting down, squatting clenching buttocks, leg crossing, and support garment and medication.","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary orthostatic hypotension","secondary_identifiers":["Orphanet:182058","UMLS:C5680599","MEDGEN:1842969"],"synonyms":[{"name":"neurogenic orthostatic hypotension","type":"related"}],"termid":"MONDO:0015914","xrefs":{"Monarch":{"xref_id":"0015914"}}}


id: PBO:0084770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial NAD+ transporter; member of the mitochondrial carrier subfamily (see also YIA6); has putative human ortholog; YEA6 has a paralog, YIA6, that arose from the whole genome duplication; human NAD+ transporter MCART1/SLC25A51 functionally complements the yia6 yea6 double null mutant, and yeast YEA6 reciprocally complements defects in MCART1/SLC25A51 null cells","termid":"PBO:0084770"}


id: PBO:0051398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda joining 6","termid":"PBO:0051398"}


id: PBO:0068469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 46, pseudogene","termid":"PBO:0068469"}


id: GO:0052257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a pathogen-associated molecular pattern, and by which an organism activates, maintains or increases the frequency, rate or extent of the innate immune response of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete pathogen-associated molecular pattern dependent induction by organism of innate immune response of other organism involved in symbiotic interaction (obsolete GO:0052257)","synonyms":[{"name":"MAMP dependent induction of innate immunity of other organism","type":"exact"},{"name":"MAMP-dependent induction of innate immunity of other organism","type":"exact"},{"name":"PAMP dependent induction of innate immunity of other organism","type":"exact"},{"name":"PAMP-dependent induction of innate immunity of other organism","type":"exact"},{"name":"general elicitor dependent induction of innate immunity of other organism","type":"exact"},{"name":"general elicitor-dependent induction of innate immunity of other organism","type":"exact"},{"name":"pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism during symbiotic interaction","type":"related"},{"name":"pathogen-associated molecular pattern dependent induction by organism of innate immunity of other organism involved in symbiotic interaction","type":"exact"}],"termid":"GO:0052257"}


id: GO:0090601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which nucleated precursor cells lose their nucleus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component disassembly","termid":"GO:0022411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enucleation","termid":"GO:0090601"}


id: MONDO:0700073
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple acyl-CoA dehydrogenase deficiency in which the cause of the disease is a mutation in the ETFA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple acyl-CoA dehydrogenase deficiency","termid":"MONDO:0009282"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002525"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005267","MONDO:0002525"],"is_obsolete":false,"name":"glutaric acidemia IIa","secondary_identifiers":["MEDGEN:479784","UMLS:C3278154"],"synonyms":[{"name":"ETFA deficiency","type":"exact"},{"name":"GA2A","type":"exact"},{"name":"glutaric acidemia 2A","type":"exact"},{"name":"multiple acyl-CoA dehydrogenase deficiency caused by mutation in ETFA","type":"exact"}],"termid":"MONDO:0700073","xrefs":{"Monarch":{"xref_id":"0700073"}}}


id: PBO:0063849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein inhibitor of activated STAT 2","termid":"PBO:0063849"}


id: PBO:0063097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"par-6 family cell polarity regulator alpha","termid":"PBO:0063097"}


id: MONDO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A chronic skin and tissue disease caused by infection by the endemicum subspecies of the spirochete Treponema pallidum.","definition_xrefs":["Wikipedia:Nonvenereal_endemic_syphilis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syphilis","termid":"MONDO:0005976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bejel","secondary_identifiers":["ICD10CM:A65","MESH:D014211","NORD:847","UMLS:C0004945","MEDGEN:2569","DOID:13431","GARD:5905"],"synonyms":[{"name":"Dichuchwa","type":"related"},{"name":"Frenga","type":"related"},{"name":"Njovera","type":"exact"},{"name":"Treponema pallidum subsp. endemicum caused disease or disorder","type":"exact"},{"name":"Treponema pallidum subsp. endemicum disease or disorder","type":"exact"},{"name":"Treponema pallidum subsp. endemicum infectious disease","type":"exact"},{"name":"endemic syphilis","type":"related"},{"name":"nonvenereal endemic syphilis","type":"exact"},{"name":"nonvenereal syphilis","type":"related"}],"termid":"MONDO:0001714","xrefs":{"Monarch":{"xref_id":"0001714"}}}


id: MONDO:0006126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well differentiated, low grade neuroendocrine tumor (carcinoid tumor) that arises from the cecum. The mitotic count is less than 2 per 10 HPF and/or the Ki67 index is equal to or less than 2 percent.","definition_xrefs":["NCIT:C5501"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cecal neoplasm","termid":"MONDO:0005694"},{"relation_name":"is_a","term_name":"colon neuroendocrine tumor G1","termid":"MONDO:0006155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"cecum neuroendocrine tumor G1","secondary_identifiers":["MEDGEN:167703","UMLS:C0854488"],"synonyms":[{"name":"caecal carcinoid tumor","type":"exact"},{"name":"caecal carcinoid tumour","type":"exact"},{"name":"caecum NET G1","type":"exact"},{"name":"caecum carcinoid tumor","type":"exact"},{"name":"caecum carcinoid tumor (disease)","type":"exact"},{"name":"caecum carcinoid tumour","type":"exact"},{"name":"caecum carcinoid tumour (disease)","type":"exact"},{"name":"caecum neuroendocrine neoplasm G1","type":"exact"},{"name":"caecum neuroendocrine tumor, well differentiated, low grade","type":"exact"},{"name":"carcinoid tumor of cecum","type":"exact"},{"name":"carcinoid tumor of the cecum","type":"exact"},{"name":"carcinoid tumour of cecum","type":"exact"},{"name":"carcinoid tumour of the cecum","type":"exact"},{"name":"cecal carcinoid tumor","type":"exact"},{"name":"cecal carcinoid tumour","type":"exact"},{"name":"cecum NET G1","type":"exact"},{"name":"cecum carcinoid tumor","type":"exact"},{"name":"cecum carcinoid tumour","type":"exact"},{"name":"cecum neuroendocrine tumor G1","type":"exact"},{"name":"grade 1 neuroendocrine neoplasm of caecum","type":"exact"}],"termid":"MONDO:0006126","xrefs":{"Monarch":{"xref_id":"0006126"}}}


id: PBO:0059965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 10","termid":"PBO:0059965"}


id: PBO:0049633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 36","termid":"PBO:0049633"}


id: PBO:0059577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 4","termid":"PBO:0059577"}


id: PBO:0079311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis-specific transcript, Y-linked 5","termid":"PBO:0079311"}


id: PBO:0050141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 51","termid":"PBO:0050141"}


id: PBO:0059502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded ATP synthase membrane subunit 6","termid":"PBO:0059502"}


id: MONDO:0003782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of leiomyosarcoma arising from the uterine corpus. It is characterized by the presence of epithelioid round cells with eosinophilic to clear cytoplasm.","definition_xrefs":["NCIT:C40174"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelioid leiomyosarcoma","termid":"MONDO:0003356"},{"relation_name":"is_a","term_name":"leiomyosarcoma of the corpus uteri","termid":"MONDO:0016262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine corpus epithelioid leiomyosarcoma","secondary_identifiers":["DOID:6139","MEDGEN:274363","UMLS:C1519851","ONCOTREE:UELMS"],"synonyms":[{"name":"body of uterus epithelioid leiomyosarcoma","type":"exact"},{"name":"epithelioid leiomyosarcoma of body of uterus","type":"exact"},{"name":"uterine corpus epithelioid leiomyosarcoma","type":"exact"},{"name":"uterine epithelioid leiomyosarcoma","type":"related"}],"termid":"MONDO:0003782","xrefs":{"Monarch":{"xref_id":"0003782"}}}


id: FYPO:0000447
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which any process of protein complex assembly at the cellular level is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal protein complex organization during vegetative growth","termid":"FYPO:0007402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein-containing complex assembly","synonyms":[{"name":"abnormal protein complex assembly","type":"narrow"},{"name":"abnormal protein complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal protein complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0000447"}


id: PBO:0049286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 5","termid":"PBO:0049286"}


id: PBO:0052163
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 11","termid":"PBO:0052163"}


id: GO:0102235
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-penten-3-one + NADPH + H+ = 1-pentan-3-one + NADP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"1-penten-3-one reductase activity","secondary_identifiers":["MetaCyc:RXN-12295"],"termid":"GO:0102235"}


id: GO:0018578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3,4-dihydroxybenzoate + O2 = 3-carboxy-cis,cis-muconate.","definition_xrefs":["EC:1.13.11.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"protocatechuate 3,4-dioxygenase activity","secondary_identifiers":["MetaCyc:PROTOCATECHUATE-34-DIOXYGENASE-RXN","RHEA:10084","UM-BBD_reactionID:r0143"],"synonyms":[{"name":"protocatechuate oxygenase activity","type":"broad"},{"name":"protocatechuate:oxygen 3,4-oxidoreductase (decyclizing)","type":"related"},{"name":"protocatechuic 3,4-dioxygenase activity","type":"related"},{"name":"protocatechuic 3,4-oxygenase activity","type":"related"},{"name":"protocatechuic acid oxidase activity","type":"related"}],"termid":"GO:0018578"}


id: GO:0097146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of NOXA and BCL-xl, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"NOXA-BCL-xl complex","termid":"GO:0097146"}


id: PBO:0044768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 50 pseudogene 2","termid":"PBO:0044768"}


id: SO:0000152
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Yeast Artificial Chromosome, a vector constructed from the telomeric, centromeric, and replication origin sequences needed for replication in yeast cells.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YAC","synonyms":[{"name":"yeast artificial chromosome","type":"exact"}],"termid":"SO:0000152"}


id: PBO:0040891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein receptor type 1A","termid":"PBO:0040891"}


id: MONDO:0010419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked sideroblastic anemia (obsolete MONDO:0010419)","termid":"MONDO:0010419","xrefs":{"Monarch":{"xref_id":"0010419"}}}


id: GO:0001533
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A type of plasma membrane that has been modified through addition of distinct intracellular and extracellular components, including ceramide, found in cornifying epithelial cells (corneocytes).","definition_xrefs":["PMID:11112355","PMID:11590230","GOC:add","PMID:15803139"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane","termid":"GO:0005886"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"cornified envelope","termid":"GO:0001533"}


id: GO:1903220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of malate dehydrogenase (decarboxylating) (NADP+) activity.","definition_xrefs":["GOC:TermGenie","PMID:12398416","GOC:sart","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of malate dehydrogenase (decarboxylating) (NADP+) activity (obsolete GO:1903220)","synonyms":[{"name":"activation of 'malic' enzyme","type":"related"},{"name":"activation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"narrow"},{"name":"activation of L-malate:NADP oxidoreductase activity","type":"narrow"},{"name":"activation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"activation of NADP-malic enzyme activity","type":"narrow"},{"name":"activation of NADP-specific malate dehydrogenase activity","type":"narrow"},{"name":"activation of NADP-specific malic enzyme","type":"related"},{"name":"activation of malate dehydrogenase (NADP, decarboxylating)","type":"narrow"},{"name":"activation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"narrow"},{"name":"activation of malate dehydrogenase (decarboxylating, NADP)","type":"narrow"},{"name":"positive regulation of 'malic' enzyme","type":"related"},{"name":"positive regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"positive regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"positive regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"positive regulation of NADP-malic enzyme activity","type":"exact"},{"name":"positive regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"positive regulation of NADP-specific malic enzyme","type":"related"},{"name":"positive regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"positive regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"up regulation of 'malic' enzyme","type":"related"},{"name":"up regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"up regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"up regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"up regulation of NADP-malic enzyme activity","type":"exact"},{"name":"up regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"up regulation of NADP-specific malic enzyme","type":"related"},{"name":"up regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"up regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"up regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"up-regulation of 'malic' enzyme","type":"related"},{"name":"up-regulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"up-regulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"up-regulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"up-regulation of NADP-malic enzyme activity","type":"exact"},{"name":"up-regulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"up-regulation of NADP-specific malic enzyme","type":"related"},{"name":"up-regulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"up-regulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"up-regulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"},{"name":"upregulation of 'malic' enzyme","type":"related"},{"name":"upregulation of (S)-malate:NADP+ oxidoreductase (oxaloacetate-decarboxylating)","type":"exact"},{"name":"upregulation of L-malate:NADP oxidoreductase activity","type":"exact"},{"name":"upregulation of NADP-linked decarboxylating malic enzyme","type":"related"},{"name":"upregulation of NADP-malic enzyme activity","type":"exact"},{"name":"upregulation of NADP-specific malate dehydrogenase activity","type":"exact"},{"name":"upregulation of NADP-specific malic enzyme","type":"related"},{"name":"upregulation of malate dehydrogenase (NADP, decarboxylating)","type":"exact"},{"name":"upregulation of malate dehydrogenase (decarboxylating) (NADP+) activity","type":"exact"},{"name":"upregulation of malate dehydrogenase (decarboxylating, NADP)","type":"exact"}],"termid":"GO:1903220"}


id: GO:1900300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of laminarabiose transport.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of laminarabiose transport (obsolete GO:1900300)","termid":"GO:1900300"}


id: PBO:0049583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 clustered histone 1","termid":"PBO:0049583"}


id: GO:0034677
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An integrin complex that comprises one alpha7 subunit and one beta1 subunit.","definition_xrefs":["PMID:12297042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integrin complex","termid":"GO:0008305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"integrin alpha7-beta1 complex","synonyms":[{"name":"ITGA7-ITGB1 complex","type":"narrow"},{"name":"alpha7-beta1 integrin complex","type":"exact"}],"termid":"GO:0034677"}


id: PBO:0026653
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_plasma_membrane_at_cell_division_site_during_vegetative_growth","termid":"PBO:0026653"}


id: MOD:01363
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-tyrosine residue to O4'-thiophospho-L-tyrosine.","definition_xrefs":["Unimod:260#Y","PubMed:15549660","PubMed:12110917"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiophosphorylated residue","termid":"MOD:00583"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-thiophospho-L-tyrosine","synonyms":[{"name":"Thiophospho","type":"related"},{"name":"Thiophosphorylation","type":"related"}],"termid":"MOD:01363"}


id: GO:0045928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways involving juvenile hormone.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of juvenile hormone metabolic process","termid":"GO:0007556"},{"relation_name":"is_a","term_name":"negative regulation of hormone metabolic process","termid":"GO:0032351"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"negatively_regulates","term_name":"juvenile hormone metabolic process","termid":"GO:0006716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of juvenile hormone metabolic process","synonyms":[{"name":"down regulation of juvenile hormone metabolic process","type":"exact"},{"name":"down-regulation of juvenile hormone metabolic process","type":"exact"},{"name":"downregulation of juvenile hormone metabolic process","type":"exact"},{"name":"inhibition of juvenile hormone metabolic process","type":"narrow"},{"name":"negative regulation of juvenile hormone metabolism","type":"exact"}],"termid":"GO:0045928"}


id: PBO:0087612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; condensin reorganizes chromosomes during both mitosis and meiosis; essential SMC chromosomal ATPase family member that forms a subcomplex with Smc2p that has ATP-hydrolyzing and DNA-binding activity, but other condensin subunits are required for chromatin binding; required for clustering of tRNA genes at the nucleolus","termid":"PBO:0087612"}


id: PBO:0090311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cul8-RING ubiquitin ligase complex WD repeat protein subunit Mms1","termid":"PBO:0090311"}


id: GO:0017002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with activin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity. Activin is one of two gonadal glycoproteins related to transforming growth factor beta.","definition_xrefs":["ISBN:0198506732","GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane receptor protein serine/threonine kinase activity","termid":"GO:0004675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0004672","GO:0038023","GO:0140096","GO:0016301"],"is_obsolete":false,"name":"activin receptor activity","synonyms":[{"name":"activin-activated receptor activity","type":"exact"}],"termid":"GO:0017002"}


id: PBO:0038569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin binding LIM protein family member 3","termid":"PBO:0038569"}


id: FYECO:0000046
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which margaric acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ margaric acid","termid":"FYECO:0000046"}


id: PBO:0078857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRPC6 pseudogene 5","termid":"PBO:0078857"}


id: GO:0140216
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the directed import of D-aspartate from the extracellular region across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:27663541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organic acid transport","termid":"GO:0032891"},{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"negative regulation of amino acid transport","termid":"GO:0051956"},{"relation_name":"is_a","term_name":"regulation of D-aspartate import across plasma membrane","termid":"GO:0140215"},{"relation_name":"negatively_regulates","term_name":"D-aspartate import across plasma membrane","termid":"GO:0070779"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of D-aspartate import across plasma membrane","termid":"GO:0140216"}


id: MONDO:0018035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with combined immunodeficiency (obsolete MONDO:0018035)","secondary_identifiers":["Orphanet:331217","NANDO:2100203"],"termid":"MONDO:0018035","xrefs":{"Monarch":{"xref_id":"0018035"}}}


id: GO:0007139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which follows anaphase II of meiosis and during which the chromosomes arrive at the poles of the cell and the division of the cytoplasm starts.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telophase","termid":"GO:0051326"},{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic telophase II","termid":"GO:0007139"}


id: PBO:0033827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex subunit Psm1/Smc1","termid":"PBO:0033827"}


id: MONDO:0002930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a kidney.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney cancer","termid":"MONDO:0002367"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"kidney sarcoma","secondary_identifiers":["NCIT:C4525","SCTID:254918001","UMLS:C0346251","ICD9:189.0","DOID:4242","MEDGEN:87548"],"synonyms":[{"name":"kidney sarcoma","type":"exact"},{"name":"renal sarcoma","type":"exact"},{"name":"sarcoma of kidney","type":"exact"},{"name":"sarcoma of the kidney","type":"exact"}],"termid":"MONDO:0002930","xrefs":{"Monarch":{"xref_id":"0002930"}}}


id: MONDO:0025089
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A herpesvirus infection of cattle characterized by inflammation and necrosis of the mucous membranes of the upper respiratory tract.","definition_xrefs":["MESH:D007241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cattle disease","termid":"MONDO:0024913"},{"relation_name":"is_a","term_name":"Herpesviridae infectious disease, non-human animal","termid":"MONDO:0700214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infectious bovine rhinotracheitis","synonyms":[{"name":"Rhinotracheitides, infectious bovine","type":"related"},{"name":"Rhinotracheitis, infectious bovine","type":"related"},{"name":"bovine Rhinotracheitides, infectious","type":"related"},{"name":"bovine Rhinotracheitis, infectious","type":"related"},{"name":"infectious bovine Rhinotracheitides","type":"related"}],"termid":"MONDO:0025089","xrefs":{"Monarch":{"xref_id":"0025089"}}}


id: GO:0009899
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ent-copalyl diphosphate = ent-kaur-16-ene + diphosphate.","definition_xrefs":["EC:4.2.3.19","RHEA:22220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terpene synthase activity","termid":"GO:0010333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003674","GO:0016829","GO:0003824"],"is_obsolete":false,"name":"ent-kaurene synthase activity","secondary_identifiers":["MetaCyc:4.2.3.19-RXN","KEGG_REACTION:R05092"],"synonyms":[{"name":"ent-copalyl-diphosphate diphosphate-lyase (cyclizing)","type":"related"},{"name":"ent-copalyl-diphosphate diphosphate-lyase (cyclizing, ent-kaurene-forming)","type":"related"},{"name":"ent-kaurene synthase B activity","type":"narrow"},{"name":"ent-kaurene synthetase B activity","type":"narrow"}],"termid":"GO:0009899"}


id: FYPO:0004040
data:
  {"alleles_by_uniquename":{"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_04284:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04284","name":"nup61delta","uniquename":"SJAG_04284:allele-1"},"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"},"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121387],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"}],"single_locus_phenotype":[{"annotations":[121388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000619"},{"annotations":[121382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003738"},{"annotations":[121430],"is_not":false,"rel_names":["has_part","is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype that affects or involves the normal or abnormal occurrence of mitotic cell cycle arrest. In mitotic cell cycle arrest, progression through the mitotic cell cycle is halted during one of the normal phases (G1, S, G2, or M).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest phenotype","termid":"FYPO:0001024"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00871":null,"SJAG_04284":null,"SJAG_04332":null,"SJAG_04464":null},"genotype_count":4,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]},"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cut3-T19E(aa) pim1-R152C(aa)","display_uniquename":"cut3-T19E-cut3-T19E-amino_acid_mutation-expression-not_assayed_or_wild_type__pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00871:allele-1","expression":"Not assayed or wild type"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]},"nup61delta":{"display_name":"nup61delta","display_uniquename":"nup61delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04284:allele-1","expression":"Null"}]}]},"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_00871","SJAG_04464"],"name":"mitotic cell cycle arrest phenotype","references_by_uniquename":{"PMID:25866389":null,"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04332","SJAG_04464","SJAG_04284"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","nup61delta"],"synonyms":[{"name":"cell cycle arrest phenotype during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest phenotype during vegetative growth","type":"exact"},{"name":"fission yeast mitotic cell cycle arrest phenotype","type":"exact"}],"termid":"FYPO:0004040","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000005":null,"FYECO:0000137":null,"FYPO:0000619":null,"FYPO:0003738":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PR:O14308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- swc4 gene.","definition_xrefs":["UniProtKB:O14308","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWR1-complex protein 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.13c","synonyms":[{"name":"Spom972h-swc4","type":"exact"}],"termid":"PR:O14308"}


id: PATO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000024 sporophytic compatability (obsolete PATO:0000024)","termid":"PATO:0000024"}


id: GO:0044062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of excretion, the elimination by an organism of the waste products that arise as a result of metabolic activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of system process","termid":"GO:0044057"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"excretion","termid":"GO:0007588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of excretion","termid":"GO:0044062"}


id: PBO:0079839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC5C antisense RNA 1","termid":"PBO:0079839"}


id: GO:0102042
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-2,3,7-trideoxy-D-lyxo-hept-6-ulosonic acid + H2O + NAD = 3-dehydroquinate + ammonium + NADH + H+.","definition_xrefs":["GOC:pz","RHEA:25956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors, NAD or NADP as acceptor","termid":"GO:0016639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dehydroquinate synthase activity","secondary_identifiers":["MetaCyc:RXN-10032","EC:1.4.1.24"],"termid":"GO:0102042"}


id: GO:0036297
data:
  {"annotated_genes":["SJAG_02031","SJAG_01410","SJAG_05280","SJAG_00727","SJAG_03068","SJAG_02556","SJAG_01644","SJAG_02690","SJAG_00819","SJAG_02200","SJAG_02334","SJAG_03734","SJAG_02294","SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77372,79997,99161,106987],"is_not":false,"summary":null,"term":"GO:0036297"},{"annotations":[91605],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036299"},{"annotations":[76886,95010,95667,112082,71991],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1901255"},{"annotations":[102669,101073,113640,105214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036298"}]},"cv_name":"biological_process","definition":"Removal of a DNA interstrand crosslink (a covalent attachment of DNA bases on opposite strands of the DNA) and restoration of the DNA. DNA interstrand crosslinks occur when both strands of duplex DNA are covalently tethered together (e.g. by an exogenous or endogenous agent), thus preventing the strand unwinding necessary for essential DNA functions such as transcription and replication.","definition_xrefs":["PMID:16464006","GOC:vw","PMID:22064477"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA repair","termid":"GO:0006281"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_00819":null,"SJAG_01410":null,"SJAG_01644":null,"SJAG_02031":null,"SJAG_02200":null,"SJAG_02294":null,"SJAG_02334":null,"SJAG_02556":null,"SJAG_02690":null,"SJAG_03068":null,"SJAG_03734":null,"SJAG_03994":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006281"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0006259","GO:0006281"],"is_obsolete":false,"name":"interstrand cross-link repair","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6783310"],"synonyms":[{"name":"ICL repair","type":"exact"}],"termid":"GO:0036297","terms_by_termid":{"GO:0036297":null,"GO:0036298":null,"GO:0036299":null,"GO:1901255":null}}


id: PBO:0055246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2673","termid":"PBO:0055246"}


id: GO:0015612
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + L-arabinose(out) = ADP + phosphate + L-arabinose(in).","definition_xrefs":["RHEA:30007"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-arabinose transmembrane transporter activity","termid":"GO:0015147"},{"relation_name":"is_a","term_name":"ABC-type monosaccharide transporter activity","termid":"GO:0015407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type L-arabinose transporter activity","secondary_identifiers":["EC:7.5.2.12","MetaCyc:ABC-2-RXN"],"synonyms":[{"name":"L-arabinose porter activity","type":"exact"},{"name":"L-arabinose-importing ATPase activity","type":"narrow"}],"termid":"GO:0015612"}


id: GO:2001076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metanephric ureteric bud development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of metanephric ureteric bud development","termid":"GO:2001074"},{"relation_name":"positively_regulates","term_name":"metanephric part of ureteric bud development","termid":"GO:0035502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metanephric ureteric bud development","termid":"GO:2001076"}


id: PBO:0054235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1617","termid":"PBO:0054235"}


id: MONDO:0017265
data:
  {"annotated_genes":["SJAG_02842","SJAG_02085"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87255,87256],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014010"}]},"cv_name":"mondo","definition":"Autosomal recessive form of inherited ichthyosis.","definition_xrefs":["MONDO:patterns/autosomal_recessive"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete inherited non-syndromic ichthyosis (obsolete MONDO:0017262)","termid":"MONDO:0017262"},{"relation_name":"is_a","term_name":"inherited ichthyosis","termid":"MONDO:0015947"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02085":null,"SJAG_02842":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"autosomal recessive congenital ichthyosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:242300","GARD:21106","MEDGEN:697564","DOID:0060655","icd11.foundation:430849255","NANDO:1200615","NANDO:2200991","Orphanet:281097","UMLS:C1274215"],"synonyms":[{"name":"ARCI","type":"exact"},{"name":"autosomal recessive inherited ichthyosis","type":"exact"},{"name":"ichthyosis, congenital, autosomal recessive","type":"exact"},{"name":"inherited ichthyosis, autosomal recessive","type":"exact"}],"termid":"MONDO:0017265","terms_by_termid":{"MONDO:0014010":null},"xrefs":{"Monarch":{"xref_id":"0017265"}}}


id: PBO:0078076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocation associated membrane protein 2","termid":"PBO:0078076"}


id: PBO:0003156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfiredoxin","termid":"PBO:0003156"}


id: GO:0102041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate + (2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl diphosphate = N-[(7,8-dihydropterin-6-yl)methyl]-4-(beta-D-ribofuranosyl)aniline 5'-phosphate + diphosphoric acid.","definition_xrefs":["RHEA:35951","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"7,8-dihydropterin-6-yl-methyl-4-(beta-D-ribofuranosyl)aminobenzene 5'-phosphate synthase","secondary_identifiers":["MetaCyc:RXN-10009","EC:2.5.1.105"],"termid":"GO:0102041"}


id: PBO:0063569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase D","termid":"PBO:0063569"}


id: PBO:0026779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_heat","termid":"PBO:0026779"}


id: PBO:0090079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial pyruvate dehydrogenase (lipoamide) phosphatase","termid":"PBO:0090079"}


id: GO:0008907
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the integration of one DNA segment into another.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140097"],"is_obsolete":false,"name":"integrase activity","secondary_identifiers":["Reactome:R-HSA-164523"],"termid":"GO:0008907"}


id: MONDO:0005672
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blastomycosis is a rare infection that may develop when people inhale a fungus called Blastomyces dermatitidis, a fungus that is found in moist soil, particularly where there is rotting vegetation. The fungus enters the body through the lungs, infecting them. The fungus then spreads to other areas of the body.The infection may affect the skin, bones and joints, and other areas. The disease usually affects people with weakened immune systems, such as those with HIV or who have had an organ transplant.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary systemic mycosis","termid":"MONDO:0000308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"blastomycosis","secondary_identifiers":["UMLS:C0005716","CSP:1988-4119","EFO:0007174","ICD9:116","SCTID:191950004","ICD10CM:B40","MEDGEN:597","MESH:D001759","NCIT:C34428","NCIT:C34429","ICD10WHO:B40","icd11.foundation:1968108845","DOID:12663","ICD9:116.0"],"synonyms":[{"name":"Blastomyces dermatitidis caused disease or disorder","type":"exact"},{"name":"Blastomyces dermatitidis disease or disorder","type":"exact"},{"name":"Blastomyces dermatitidis infection","type":"exact"},{"name":"Blastomyces dermatitidis infectious disease","type":"exact"},{"name":"Chicago disease","type":"exact"},{"name":"Gilchrist's disease","type":"exact"},{"name":"North American blastomycosis","type":"exact"},{"name":"blastomycotic infection","type":"exact"},{"name":"infection by Blastomyces dermatitidis","type":"exact"}],"termid":"MONDO:0005672","xrefs":{"Monarch":{"xref_id":"0005672"}}}


id: FYPO:0004399
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing the protein kinase inhibitor KT5720.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000003","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on KT5720","synonyms":[{"name":"normal cell population growth in presence of KT5720","type":"exact"},{"name":"normal cell population growth on KT5720","type":"exact"},{"name":"normal cellular response to KT5720","type":"related"},{"name":"normal vegetative cell population growth on KT5720","type":"exact"}],"termid":"FYPO:0004399"}


id: PBO:0080750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-box binding protein 1","termid":"PBO:0080750"}


id: PBO:0068038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 343","termid":"PBO:0068038"}


id: PBO:0036333
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by A. thaliana COQ9","termid":"PBO:0036333"}


id: PBO:0003882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase Gcn20 (predicted)","termid":"PBO:0003882"}


id: MONDO:0005418
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Left ventricular non-compaction (LVNC) is characterized by prominent left ventricular trabeculae and deep inter-trabecular recesses. The myocardial wall is often thickened with a thin, compacted epicardial layer and a thickened endocardial layer. In some patients, LVNC is associated with left ventricular dilatation and systolic dysfunction, which can be transient in neonates.","definition_xrefs":["EFO:0004686"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"non-compaction cardiomyopathy","secondary_identifiers":["MEDGEN:1843481","UMLS:C4324548"],"termid":"MONDO:0005418","xrefs":{"Monarch":{"xref_id":"0005418"}}}


id: PBO:0073503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SH2B adaptor protein 2","termid":"PBO:0073503"}


id: FYPO:0006015
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell has more than one septum, and forms a mating projection.","definition_xrefs":["PomBase:mah","PMID:28410370"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiseptate cell","termid":"FYPO:0004295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"multiseptate cell with shmoo","synonyms":[{"name":"large non-mated cells","type":"related"},{"name":"multiseptate shmooing cell","type":"exact"}],"termid":"FYPO:0006015"}


id: PBO:0047066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 131 member A","termid":"PBO:0047066"}


id: PBO:0026682
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cell_population_growth_on_galactose_carbon_source","termid":"PBO:0026682"}


id: PBO:0091003
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF4451 family conserved fungal protein","termid":"PBO:0091003"}


id: PBO:0074140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member A5","termid":"PBO:0074140"}


id: GO:0060529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized epithelial cell acquires specialized features of a squamous basal epithelial stem cell of the prostate.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glandular epithelial cell differentiation","termid":"GO:0002067"},{"relation_name":"is_a","term_name":"stem cell differentiation","termid":"GO:0048863"},{"relation_name":"is_a","term_name":"epithelial cell differentiation involved in prostate gland development","termid":"GO:0060742"},{"relation_name":"part_of","term_name":"prostate glandular acinus development","termid":"GO:0060525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"squamous basal epithelial stem cell differentiation involved in prostate gland acinus development","termid":"GO:0060529"}


id: GO:0072737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a diamide (N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to diamide","synonyms":[{"name":"response to N,N,N',N'-tetramethyldiazene-1,2-dicarboxamide","type":"exact"}],"termid":"GO:0072737"}


id: PBO:0068567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 18, pseudogene","termid":"PBO:0068567"}


id: GO:0008018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete structural protein of chorion (sensu Drosophila) (obsolete GO:0008018)","synonyms":[{"name":"structural protein of chorion (sensu Drosophila)","type":"exact"}],"termid":"GO:0008018"}


id: PBO:0051339
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2D-14 (pseudogene)","termid":"PBO:0051339"}


id: MONDO:0020490
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 9 is a chromosomal abnormality that can affect may parts of the body. In people affected by this condition, some of the body's cells have three copies of chromosome 9 (trisomy), while other cells have the usual two copies of this chromosome. The signs and symptoms vary but may include mild to severe intellectual disability, developmental delay, growth problems (both before and after birth), congenital heart defects, and/or abnormalities of the craniofacial (skull and face) region. Most cases are not inherited; it often occurs sporadically as a random event during the formation of the reproductive cells (egg and sperm) or as the fertilized egg divides. Treatment is based on the signs and symptoms present in each person.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 9 disorder","termid":"MONDO:0700016"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 9","secondary_identifiers":["Orphanet:99776","UMLS:C2930908","MESH:C535454","NORD:966","GARD:43","MEDGEN:419661","SCTID:764989007"],"synonyms":[{"name":"Mosaic trisomy chromosome 9","type":"related"},{"name":"Mosaic trisomy type 9","type":"exact"},{"name":"trisomy 9 mosaicism","type":"related"}],"termid":"MONDO:0020490","xrefs":{"Monarch":{"xref_id":"0020490"}}}


id: GO:0018407
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The iodination of peptidyl-thyronine to form peptidyl-3',3'',5'-triiodo-L-thyronine (triiodothyronine).","definition_xrefs":["RESID:AA0177"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-thyronine iodination to form 3',3'',5'-triiodo-L-thyronine (obsolete GO:0018407)","synonyms":[{"name":"peptidyl-thyronine iodination to form triiodothyronine","type":"broad"}],"termid":"GO:0018407"}


id: PBO:0011526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel subunit/aldo-keto reductase (predicted)","termid":"PBO:0011526"}


id: PBO:0089446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AMP-binding dehydrogenase","termid":"PBO:0089446"}


id: FYPO:0007974
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic anaphase B in which interpolar microtubule polymerization occurs at a higher rate, or speed, than normal for microtubules with their plus ends inside the nuclear membrane bridge formed during mitotic anaphase B.","definition_xrefs":["PomBase:mlr","PMID:35293864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased rate of interpolar microtubule polymerization during mitotic anaphase B","termid":"FYPO:0007971"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0001320"],"is_obsolete":false,"name":"increased rate of interpolar microtubule polymerization inside the mitotic nuclear membrane bridge","termid":"FYPO:0007974"}


id: PBO:0071723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 21","termid":"PBO:0071723"}


id: PR:P12000
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA ligase 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00562","PANTHER:PTHR10459:SF10","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA ligase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.01","secondary_identifiers":["UniProtKB:P12000"],"synonyms":[{"name":"DNA ligase I (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-LIG1","type":"exact"},{"name":"polydeoxyribonucleotide synthase [ATP] 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P12000"}


id: PR:Q9USP4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USP4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.03","synonyms":[{"name":"Spom972h-mug1","type":"exact"}],"termid":"PR:Q9USP4"}


id: GO:0048057
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the R3 and R4 pair of photoreceptors in the eye over time, from their formation to the mature structures. R3 and R4 are paired photoreceptors that contribute to the outer rhabdomeres. An example of this process is found in Drosophila melanogaster.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"compound eye photoreceptor development","termid":"GO:0042051"},{"relation_name":"part_of","term_name":"R3/R4 cell differentiation","termid":"GO:0048056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"R3/R4 development","termid":"GO:0048057"}


id: MONDO:0022676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract - glaucoma (obsolete MONDO:0022676)","termid":"MONDO:0022676","xrefs":{"Monarch":{"xref_id":"0022676"}}}


id: FYPO:0004960
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the mitochondria is normal (i.e. indistinguishable from wild type). Total RNA or a specific RNA may be measured.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during vegetative growth","termid":"FYPO:0001317"},{"relation_name":"is_a","term_name":"normal level of substance in mitochondrion","termid":"FYPO:0004959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001312","FYPO:0001320","FYPO:0000257"],"is_obsolete":false,"name":"normal mitochondrial RNA level","synonyms":[{"name":"normal mitochondrial RNA accumulation","type":"related"},{"name":"normal mitochondrial RNA level during mitotic cell cycle","type":"related"},{"name":"normal mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"normal mitochondrial transcript level","type":"exact"}],"termid":"FYPO:0004960"}


id: GO:0042017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-22.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-22 binding","synonyms":[{"name":"IL-22 binding","type":"exact"}],"termid":"GO:0042017"}


id: SO:0001521
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When translocation occurs between nonhomologous chromosomes and involved an equal exchange of genetic materials.","direct_ancestors":[{"relation_name":"is_a","term_name":"translocaton_attribute","termid":"SO:0001520"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal","termid":"SO:0001521"}


id: GO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The maintenance of the structure and integrity of the mitochondrial genome; includes replication and segregation of the mitochondrial chromosome.","definition_xrefs":["GOC:vw","GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial genome maintenance (obsolete GO:0000002)","termid":"GO:0000002"}


id: GO:0061511
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The centrosome organization process by which a centriole increases in length as part of the process of replication.","definition_xrefs":["PMID:21576394","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"centriole replication","termid":"GO:0007099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0000226","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"centriole elongation","termid":"GO:0061511"}


id: MONDO:0003198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma that arises from the small intestine. Histologic variants include mucinous adenocarcinoma and signet ring cell carcinoma.","definition_xrefs":["NCIT:C7888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"small intestine carcinoma","termid":"MONDO:0005522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"small intestine adenocarcinoma","secondary_identifiers":["SCTID:424440001","icd11.foundation:1369513329","Orphanet:104075","DOID:4906","EFO:1000532","GARD:19851","UMLS:C0278803","MEDGEN:82984"],"synonyms":[{"name":"adenocarcinoma - small intest.","type":"exact"},{"name":"adenocarcinoma of small bowel","type":"exact"},{"name":"adenocarcinoma of small intestine","type":"exact"},{"name":"adenocarcinoma of the small bowel","type":"exact"},{"name":"adenocarcinoma of the small intestine","type":"exact"},{"name":"small bowel adenocarcinoma","type":"exact"},{"name":"small intestinal adenocarcinoma","type":"exact"},{"name":"small intestine adenocarcinoma","type":"exact"}],"termid":"MONDO:0003198","xrefs":{"Monarch":{"xref_id":"0003198"}}}


id: PBO:0065380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy specific beta-1-glycoprotein 8","termid":"PBO:0065380"}


id: PBO:0054864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2278","termid":"PBO:0054864"}


id: GO:0042860
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving achromobactin, a citrate siderophore.","definition_xrefs":["GOC:jl","PMID:10928541"],"gene_count":0,"genotype_count":0,"name":"obsolete achromobactin metabolic process (obsolete GO:0042860)","synonyms":[{"name":"achromobactin metabolism","type":"exact"}],"termid":"GO:0042860"}


id: PBO:0069824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1110, pseudogene","termid":"PBO:0069824"}


id: PBO:0068053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 358","termid":"PBO:0068053"}


id: PBO:0063730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatase and actin regulator 3","termid":"PBO:0063730"}


id: PBO:0088883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial [4Fe-4S] cluster transfer protein Fra3","termid":"PBO:0088883"}


id: FYPO:0007958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of mitotic spindle elongation is increased during miotic M phase.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle elongation","termid":"FYPO:0000131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0000631","FYPO:0000002","FYPO:0001320","FYPO:0000337","FYPO:0000641","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased rate of mitotic spindle elongation","termid":"FYPO:0007958"}


id: PBO:0065038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELID1 pseudogene 3","termid":"PBO:0065038"}


id: PBO:0069959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1252, pseudogene","termid":"PBO:0069959"}


id: PBO:0087615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation and chromatin binding by the complex; required for tRNA genes clustering at the nucleolus; required for replication slow zone breakage following Mec1p inactivation; transcription is cell cycle regulated, peaking in mitosis and declining in G1; protein is constitutively degraded by the proteasome; rate limiting for condensin recruitment to chromatin","termid":"PBO:0087615"}


id: GO:0097303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways by which N-acyl transfer leads to formation of a water-soluble protein-lipid complex.","definition_xrefs":["GOC:pde","UniPathway:UPA00666","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein biosynthetic process via N-acyl transfer (obsolete GO:0097303)","synonyms":[{"name":"lipoprotein biosynthesis (N-acyl transfer)","type":"exact"}],"termid":"GO:0097303"}


id: PBO:0016585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human ATXN10 ortholog","termid":"PBO:0016585"}


id: GO:0040038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which two small cells are generated, as byproducts destined to degenerate, as a result of the first and second meiotic divisions of a primary oocyte during its development to a mature ovum. One polar body is formed in the first division of meiosis and the other in the second division; at each division, the cytoplasm divides unequally, so that the polar body is of much smaller size than the developing oocyte. At the second division in which a polar body is formed, the polar body and the developing oocyte each contain a haploid set of chromosomes.","definition_xrefs":["ISBN:0198506732","GOC:ems"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cytokinesis","termid":"GO:0033206"},{"relation_name":"part_of","term_name":"female meiotic nuclear division","termid":"GO:0007143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0140013"],"is_obsolete":false,"name":"polar body extrusion after meiotic divisions","termid":"GO:0040038"}


id: MONDO:1012487
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"zinc deficiency-like syndrome, non-human animal","termid":"MONDO:1011758"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc deficiency-like syndrome, cattle","secondary_identifiers":["OMIA:001935-9913"],"termid":"MONDO:1012487","xrefs":{"Monarch":{"xref_id":"1012487"}}}


id: PBO:0058740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6864","termid":"PBO:0058740"}


id: MONDO:0001107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cerebral lipidosis (obsolete MONDO:0001107)","termid":"MONDO:0001107","xrefs":{"Monarch":{"xref_id":"0001107"}}}


id: GO:0043303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated exocytosis of secretory granules containing preformed mediators such as histamine, serotonin, and neutral proteases by a mast cell.","definition_xrefs":["ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosome localization","termid":"GO:0032418"},{"relation_name":"is_a","term_name":"leukocyte degranulation","termid":"GO:0043299"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"},{"relation_name":"part_of","term_name":"mast cell activation involved in immune response","termid":"GO:0002279"},{"relation_name":"part_of","term_name":"mast cell mediated immunity","termid":"GO:0002448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179","GO:0016192"],"is_obsolete":false,"name":"mast cell degranulation","synonyms":[{"name":"mast cell granule exocytosis","type":"exact"}],"termid":"GO:0043303"}


id: PBO:0047815
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FOXN3 antisense RNA 1","termid":"PBO:0047815"}


id: PBO:0089879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER membrane protein complex subunit Emc4","termid":"PBO:0089879"}


id: PBO:0089452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrolipoamide S-acetyltransferase E2, Lat1","termid":"PBO:0089452"}


id: GO:0047302
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + UDP-2-acetamido-4-amino-2,4,6-trideoxy-D-glucose = L-glutamate + UDP-2-acetamido-4-dehydro-2,6-dideoxy-beta-D-glucose.","definition_xrefs":["RHEA:31663","PMID:16286454"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016769","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"UDP-2-acetamido-4-amino-2,4,6-trideoxyglucose transaminase activity","secondary_identifiers":["MetaCyc:RXN-12812","EC:2.6.1.34","KEGG_REACTION:R04529"],"synonyms":[{"name":"UDP-2-acetamido-4-amino-2,4,6-trideoxyglucose:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"UDP-4-amino-2-acetamido-2,4,6-trideoxyglucose aminotransferase activity","type":"exact"},{"name":"UDP-4-amino-2-acetamido-2,4,6-trideoxyglucose transaminase activity","type":"exact"},{"name":"uridine diphospho-4-amino-2-acetamido-2,4,6-trideoxyglucose aminotransferase activity","type":"related"}],"termid":"GO:0047302"}


id: MONDO:0007842
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A type of Ehlers-Danlos syndrome characterized by generalized joint hypermobility often complicated by dislocation of major joints, particularly the shoulder but in some cases the kneecap. Congenital hip dislocation has also been frequently reported. The syndrome has been described in several families. It is transmitted as an autosomal dominant trait, with high penetrance.","definition_xrefs":["Orphanet:2295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome","termid":"MONDO:0020066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"joint laxity, familial","secondary_identifiers":["OMIM:147900","MESH:C535884","MEDGEN:120629","SCTID:71322004","UMLS:C0268349","GARD:3054"],"synonyms":[{"name":"EDS 11 (formerly)","type":"related"},{"name":"EDS XI","type":"exact"},{"name":"EDS Xi","type":"related"},{"name":"EDS Xi, formerly","type":"related"},{"name":"EDS11","type":"related"},{"name":"EDS11, formerly","type":"related"},{"name":"Ehlers-Danlos syndrome type 11, formerly","type":"exact"},{"name":"Ehlers-Danlos syndrome, type 11 (formerly)","type":"related"},{"name":"Ehlers-Danlos syndrome, type Xi","type":"related"},{"name":"Ehlers-Danlos syndrome, type Xi, formerly","type":"related"},{"name":"Joint instability syndrome","type":"exact"},{"name":"articular hypermobility syndrome","type":"related"},{"name":"familial joint instability syndrome","type":"exact"},{"name":"familial joint laxity","type":"exact"},{"name":"joint laxity, familial","type":"exact"}],"termid":"MONDO:0007842","xrefs":{"Monarch":{"xref_id":"0007842"}}}


id: PBO:0068850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 88, pseudogene","termid":"PBO:0068850"}


id: PBO:0060020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 8","termid":"PBO:0060020"}


id: MONDO:0015270
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Butyrylcholinesterase (BChE) deficiency is a metabolic disorder characterized by prolonged apnoea after the use of certain anesthetic drugs, including the muscle relaxants succinylcholine or mivacurium and other ester local anesthetics. The duration of the prolonged apnoea varies significantly depending on the extent of the enzyme deficiency.","definition_xrefs":["Orphanet:132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic disease involving other neurotransmitter deficiency","termid":"MONDO:0019253"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"butyrylcholinesterase deficiency","secondary_identifiers":["OMIM:617936","SCTID:191397007","icd11.foundation:581237559","UMLS:C1283400","ICD9:289.89","GARD:7482","MESH:C537417","MEDGEN:220923"],"synonyms":[{"name":"Acholinesterasemia","type":"related"},{"name":"BCHED","type":"related"},{"name":"Suxamethonium sensitivity","type":"related"},{"name":"apnea, postanesthetic","type":"related"},{"name":"apnea, postanesthetic, susceptibility to, due to BCHE deficiency","type":"exact"},{"name":"butyrylcholinesterase deficiency","type":"exact"},{"name":"butyrylcholinesterase deficiency, fluoride-resistant, Japanese type","type":"related"},{"name":"cholinesterase 2 deficiency","type":"related"},{"name":"hypocholinesterasemia, fluoride-resistant, Japanese type","type":"related"},{"name":"pseudocholinesterase E1","type":"related"},{"name":"pseudocholinesterase deficiency","type":"related"},{"name":"succinylcholine sensitivity","type":"related"}],"termid":"MONDO:0015270","xrefs":{"Monarch":{"xref_id":"0015270"}}}


id: GO:0047601
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetate + diphosphate = acetyl phosphate + phosphate.","definition_xrefs":["RHEA:24276","EC:2.7.2.12"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, carboxyl group as acceptor","termid":"GO:0016774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016301"],"is_obsolete":false,"name":"acetate kinase (diphosphate) activity","secondary_identifiers":["MetaCyc:ACETATE-KINASE-PYROPHOSPHATE-RXN","KEGG_REACTION:R00320"],"synonyms":[{"name":"acetate kinase (pyrophosphate) activity","type":"related"},{"name":"diphosphate:acetate phosphotransferase activity","type":"related"},{"name":"pyrophosphate-acetate phosphotransferase activity","type":"related"}],"termid":"GO:0047601"}


id: PBO:0069194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 448, pseudogene","termid":"PBO:0069194"}


id: PBO:0110024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ku70 (human XRCC6 ortholog) Pku70","termid":"PBO:0110024"}


id: GO:0050679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of epithelial cell proliferation.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"regulation of epithelial cell proliferation","termid":"GO:0050678"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation","synonyms":[{"name":"activation of epithelial cell proliferation","type":"narrow"},{"name":"stimulation of epithelial cell proliferation","type":"narrow"},{"name":"up regulation of epithelial cell proliferation","type":"exact"},{"name":"up-regulation of epithelial cell proliferation","type":"exact"},{"name":"upregulation of epithelial cell proliferation","type":"exact"}],"termid":"GO:0050679"}


id: PBO:0121035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C18orf32 pseudogene 2","termid":"PBO:0121035"}


id: PBO:0062294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 5 pseudogene","termid":"PBO:0062294"}


id: GO:0003191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the coronary sinus valve from unspecified parts. This process begins with the specific processes that contribute to the appearance of the discrete structure and ends when the structural rudiment is recognizable.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart valve formation","termid":"GO:0003188"},{"relation_name":"part_of","term_name":"coronary sinus valve morphogenesis","termid":"GO:0003182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary sinus valve formation","termid":"GO:0003191"}


id: GO:0016188
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Steps required to form an initiated synaptic vesicle into a fully formed and transmissible synaptic vesicle.","definition_xrefs":["PMID:10099709","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"developmental maturation","termid":"GO:0021700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"synaptic vesicle maturation","termid":"GO:0016188"}


id: MONDO:0859255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor peripheral neuropathy","termid":"MONDO:0002316"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"peripheral motor neuropathy, childhood-onset, biotin-responsive","secondary_identifiers":["MEDGEN:1809728","OMIM:619903","UMLS:C5676997"],"termid":"MONDO:0859255","xrefs":{"Monarch":{"xref_id":"0859255"}}}


id: PBO:0086200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that associates with mitochondrial ribosome; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion; null mutation results in a decrease in plasma membrane electron transport","termid":"PBO:0086200"}


id: FYECO:0000081
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[121543],"is_not":false,"summary":null,"term":"FYECO:0000081"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing yeast extract and other components. The concentration of glucose is very low (eg around 0.1%).","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"is_obsolete":false,"name":"low glucose YES","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"low glucose YE","type":"related"},{"name":"low glucose rich medium","type":"related"}],"termid":"FYECO:0000081","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000081":null}}


id: GO:0051160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xylitol, a five-carbon sugar alcohol derived from xylose by reduction of the carbonyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentitol catabolic process","termid":"GO:0019527"},{"relation_name":"is_a","term_name":"xylitol metabolic process","termid":"GO:0051164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0044281"],"is_obsolete":false,"name":"xylitol catabolic process","synonyms":[{"name":"L-xylitol breakdown","type":"exact"},{"name":"L-xylitol catabolism","type":"exact"},{"name":"L-xylitol degradation","type":"exact"}],"termid":"GO:0051160"}


id: GO:1902169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a catechin stimulus.","definition_xrefs":["GOC:TermGenie","PMID:23516620","GOC:rjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to catechin","termid":"GO:1902168"},{"relation_name":"is_a","term_name":"cellular response to flavonoid","termid":"GO:1905396"},{"relation_name":"is_a","term_name":"cellular response to phenylpropanoid","termid":"GO:1905546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to catechin","termid":"GO:1902169"}


id: MONDO:0018567
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy, Okinawa type","termid":"MONDO:0011468"},{"relation_name":"is_a","term_name":"Charcot-Marie-Tooth disease type 2","termid":"MONDO:0018993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"autosomal dominant Charcot-Marie-Tooth disease type 2 due to TFG mutation","secondary_identifiers":["GARD:21815","MEDGEN:1800451","Orphanet:435819","UMLS:C5569028"],"synonyms":[{"name":"CMT2 due to TFG mutation","type":"exact"}],"termid":"MONDO:0018567","xrefs":{"Monarch":{"xref_id":"0018567"}}}


id: GO:1903872
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of DNA recombinase mediator complex assembly.","definition_xrefs":["PMID:18347097","GOC:TermGenie","GO_REF:0000058","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein-containing complex assembly","termid":"GO:0043254"},{"relation_name":"regulates","term_name":"DNA recombinase mediator complex assembly","termid":"GO:1903871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"regulation of DNA recombinase mediator complex assembly","synonyms":[{"name":"regulation of DNA recombinase mediator complex formation","type":"exact"}],"termid":"GO:1903872"}


id: PBO:0067406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 516, pseudogene","termid":"PBO:0067406"}


id: MONDO:0100491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare and extreme form of psoriasis characterized by the appearance of sterile pustules which can take many patterns. All the main pathological features of the disease are accentuated. Generalized pustular psoriasis is clinically heterogeneous in its age at onset, precipitants, severity, and natural history. Many overlapping clinical entities are recognized. There is a relationship between these entities and plaque psoriasis, as some individuals may have episodes of plaque psoriasis preceding or following the generalized pustular psoriasis, but in others generalized pustular psoriasis occurs as the sole phenotype without plaque psoriasis at any time.","definition_xrefs":["PMID:29630241"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pustular psoriasis","termid":"MONDO:0022205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"generalized pustular psoriasis","secondary_identifiers":["ICD10CM:L40.1","SCTID:238612002","MEDGEN:473074","Orphanet:247353","UMLS:C0343055"],"termid":"MONDO:0100491","xrefs":{"Monarch":{"xref_id":"0100491"}}}


id: FYPO:0008365
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to 2-deoxyglucose. Cells stop growing (and may die) at a concentration of 2-deoxyglucose that allows wild type cells to grow.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0002683","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to 2-deoxyglucose","termid":"FYPO:0008365"}


id: GO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the second transesterification reaction of spliceosomal mRNA splicing. Ligation of the two exons occurs via a transesterification reaction where the free 3'-hydroxyl group of the 5' exon is the nucleophile attacking the 3' splice site. Non-expressed sequences are now detached from the exons. In cis splicing, the intron is in a lariat structure.","definition_xrefs":["ISBN:0879695897","PMID:19239890","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"second spliceosomal transesterification activity","secondary_identifiers":["Reactome:R-HSA-9770236"],"synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"},{"name":"lariat formation, 5'-splice site cleavage","type":"related"}],"termid":"GO:0000386"}


id: GO:0002502
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a peptide to the antigen binding groove of an MHC class I protein complex. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide antigen assembly with MHC protein complex","termid":"GO:0002501"},{"relation_name":"part_of","term_name":"MHC class I protein complex assembly","termid":"GO:0002397"},{"relation_name":"part_of","term_name":"antigen processing and presentation of peptide antigen via MHC class I","termid":"GO:0002474"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"peptide antigen assembly with MHC class I protein complex","termid":"GO:0002502"}


id: GO:0039689
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A viral genome replication process where the template genome is negative stranded, single stranded RNA ((-)ssRNA).","definition_xrefs":["VZ:1096","GOC:jl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral RNA genome replication","termid":"GO:0039694"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative stranded viral RNA replication","synonyms":[{"name":"(-)ss viral RNA replication","type":"exact"}],"termid":"GO:0039689"}


id: GO:0048067
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Establishment of a pattern of pigment in the cuticle of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental pigmentation","termid":"GO:0048066"},{"relation_name":"part_of","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle pigmentation","termid":"GO:0048067"}


id: MONDO:1012291
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal hepatitis, non-human animal","termid":"MONDO:1011779"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neonatal hepatitis, dog","secondary_identifiers":["OMIA:001094-9615"],"termid":"MONDO:1012291","xrefs":{"Monarch":{"xref_id":"1012291"}}}


id: GO:2000181
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of blood vessel morphogenesis.","definition_xrefs":["GOC:dph","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"is_a","term_name":"negative regulation of vasculature development","termid":"GO:1901343"},{"relation_name":"negatively_regulates","term_name":"blood vessel morphogenesis","termid":"GO:0048514"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood vessel morphogenesis","termid":"GO:2000181"}


id: PBO:0035869
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_transport_along_microtubule_during_vegetative_growth","termid":"PBO:0035869"}


id: PBO:0043516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein family member 5","termid":"PBO:0043516"}


id: GO:0018583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: biphenyl-2,3-diol + O2 = 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate + H2O.","definition_xrefs":["EC:1.13.11.39"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"biphenyl-2,3-diol 1,2-dioxygenase activity","secondary_identifiers":["RHEA:14413","MetaCyc:BIPHENYL-23-DIOL-12-DIOXYGENASE-RXN","UM-BBD_enzymeID:r0390"],"synonyms":[{"name":"2,3-dihydroxybiphenyl 1,2-dioxygenase activity","type":"broad"},{"name":"2,3-dihydroxybiphenyl dioxygenase activity","type":"broad"},{"name":"biphenyl-2,3-diol dioxygenase activity","type":"related"},{"name":"biphenyl-2,3-diol:oxygen 1,2-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0018583"}


id: GO:0005126
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cytokine receptor.","definition_xrefs":["GOC:mah","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cytokine receptor binding","synonyms":[{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor binding","type":"exact"},{"name":"hematopoietin/interferon-class (D200-domain) cytokine receptor ligand","type":"narrow"}],"termid":"GO:0005126"}


id: PBO:0026932
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cellular_HMW_ubiquitin_conjugate_level","termid":"PBO:0026932"}


id: MONDO:0020840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primarily a lung disorder characterized by onset of respiratory insufficiency due to pulmonary alveolar proteinosis (PAP) in the first months of life. Affected individuals may have normal respiratory function at birth. Development of the disorder appears to be influenced or triggered by viral infection, manifest as progressive respiratory insufficiency, confluent consolidations on lung imaging, and diffuse collection of periodic acid-Schiff (PAS)-positive material in pulmonary alveoli associated with small and nonfoamy alveolar macrophages. Patients also have hypogammaglobulinemia, leukocytosis, and splenomegaly. Many patients die of respiratory failure in infancy or early childhood; hematopoietic stem cell transplantation (HSCT) is curative. The pathogenesis may be related to abnormal function of alveolar macrophages, resulting in decreased catabolism of surfactant. The disorder results from a gain-of-function effect that particularly affects B cells and monocytes.","definition_xrefs":["PMID:29455859","OMIM:618042"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary alveolar proteinosis with hypogammaglobulinemia","secondary_identifiers":["UMLS:C4747984","MEDGEN:1648298","DOID:0061070"],"synonyms":[{"name":"PAPHG","type":"exact"},{"name":"immunodeficiency (due to OAS1 gain-of-function variant) with pulmonary alveolar proteinosis and hypogammaglobulinemia","type":"exact"},{"name":"pulmonary alveolar proteinosis with hypogammaglobulinemia","type":"exact"}],"termid":"MONDO:0020840","xrefs":{"Monarch":{"xref_id":"0020840"}}}


id: MONDO:0008971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Pyle disease","termid":"MONDO:0009943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"chondrodysplasia calcificans Metaphysealis","secondary_identifiers":["MESH:C565855","MEDGEN:347809","GARD:10613","OMIM:215050","UMLS:C1859147"],"synonyms":[{"name":"chondrodysplasia calcificans Metaphysealis","type":"exact"}],"termid":"MONDO:0008971","xrefs":{"Monarch":{"xref_id":"0008971"}}}


id: FYECO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which naphthaleneacetic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ naphthaleneacetic acid","termid":"FYECO:0000267"}


id: GO:0046341
data:
  {"annotated_genes":["SJAG_01233","SJAG_00168","SJAG_00426","SJAG_03563"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[115074,121369,116733,81999],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving CDP-diacylglycerol, CDP-1,2-diacylglycerol, a substance composed of diacylglycerol in glycosidic linkage with cytidine diphosphate. It is a common intermediate in phospholipid biosynthesis.","definition_xrefs":["PMID:24533860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycerophospholipid metabolic process","termid":"GO:0006650"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00168":null,"SJAG_00426":null,"SJAG_01233":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"CDP-diacylglycerol metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25318672":null},"synonyms":[{"name":"CDP-diacylglycerol metabolism","type":"exact"}],"termid":"GO:0046341","terms_by_termid":{"GO:0016024":null}}


id: GO:0009541
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A three dimensional regular lattice found in etioplasts. It is composed of a continuous system of tubules but when exposed to light the symmetrical arrangement is rapidly lost as tubules become pinched off into two dimensional sections of lattice. These for perforated sheets of membrane that move apart, extend and increase, finally establishing the typical granal and intergranal lamellae of the mature chloroplast.","definition_xrefs":["ISBN:0140514031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"etioplast","termid":"GO:0009513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"etioplast prolamellar body","termid":"GO:0009541"}


id: PBO:0060031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 19","termid":"PBO:0060031"}


id: MONDO:0019212
data:
  {"annotated_genes":["SJAG_03352","SJAG_03349","SJAG_00580","SJAG_01474","SJAG_04865"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89107,89106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008293"},{"annotations":[88128],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013868"},{"annotations":[87983,87984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014713"}]},"cv_name":"mondo","definition":"Disseminated superficial actinic porokeratosis (DSAP) is the most common form of porokeratosis characterized by the presence of several small annular plaques with a distinctive keratotic rim found most commonly on sun-exposed areas of the skin, particularly the extremities.","definition_xrefs":["Orphanet:79152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porokeratosis","termid":"MONDO:0006602"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00580":null,"SJAG_01474":null,"SJAG_03349":null,"SJAG_03352":null,"SJAG_04865":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"disseminated superficial actinic porokeratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:41495000","UMLS:C0265970","ICD9:692.75","ICD10CM:L56.5","GARD:10983","icd11.foundation:1828294192","MEDGEN:120561"],"termid":"MONDO:0019212","terms_by_termid":{"MONDO:0008293":null,"MONDO:0013868":null,"MONDO:0014713":null},"xrefs":{"Monarch":{"xref_id":"0019212"}}}


id: GO:0052867
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidyl-1D-myo-inositol 1,4,5-trisphosphate + H2O = 1-phosphatidyl-1D-myo-inositol 1,4-bisphosphate + phosphate.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol trisphosphate phosphatase activity","termid":"GO:0034594"},{"relation_name":"is_a","term_name":"phosphatidylinositol phosphate 5-phosphatase activity","termid":"GO:0034595"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016788","GO:0016787"],"is_obsolete":false,"name":"phosphatidylinositol-1,4,5-trisphosphate 5-phosphatase activity","synonyms":[{"name":"PtdIns(1,4,5)P(3) phosphatase activity","type":"broad"},{"name":"PtdIns(1,4,5)P3 phosphatase activity","type":"broad"},{"name":"phosphatidyl-myo-inositol-1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol 1,4,5-trisphosphate phosphatase activity","type":"broad"},{"name":"phosphatidylinositol-trisphosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphatase activity","type":"broad"},{"name":"triphosphoinositide phosphomonoesterase activity","type":"broad"}],"termid":"GO:0052867"}


id: GO:0019166
data:
  {"annotated_genes":["SJAG_02717"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[113379],"is_not":false,"summary":null,"term":"GO:0019166"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + NADP+ = trans-2,3-dehydroacyl-CoA + NADPH + H+.","definition_xrefs":["EC:1.3.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"trans-2-enoyl-CoA reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:TRANSENOYLCOARED-RXN","Reactome:R-HSA-8952873","Reactome:R-HSA-6809810","Reactome:R-HSA-6786720","RHEA:33763"],"synonyms":[{"name":"NADPH-dependent trans-2-enoyl-CoA reductase activity","type":"related"},{"name":"acyl-CoA:NADP+ trans-2-oxidoreductase activity","type":"related"},{"name":"reductase, trans-enoyl coenzyme A","type":"related"}],"termid":"GO:0019166","terms_by_termid":{"GO:0019166":null}}


id: MOD:01441
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that inserts or replaces a residue with a natural, standard, encoded residue.","definition_xrefs":["PubMed:6692818","PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"natural residue","termid":"MOD:00009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"natural, standard, encoded residue","termid":"MOD:01441"}


id: PBO:0060242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin binding protein H like","termid":"PBO:0060242"}


id: PBO:0051374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 3/OR2-5 (pseudogene)","termid":"PBO:0051374"}


id: GO:1900876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nonadec-1-ene.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nonadec-1-ene metabolic process","synonyms":[{"name":"nonadec-1-ene metabolism","type":"exact"}],"termid":"GO:1900876"}


id: GO:0036222
data:
  {"annotated_genes":["SJAG_03797"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[120688],"is_not":false,"summary":null,"term":"GO:0036222"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: XTP + H2O = XMP + H+ + diphosphate.","definition_xrefs":["GOC:pz","PMID:22531138","PMID:16216582","RHEA:28610"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside triphosphate diphosphatase activity","termid":"GO:0047429"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03797":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0047429"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824","GO:0047429"],"is_obsolete":false,"name":"XTP diphosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["KEGG_REACTION:R02720","GO:0103024","Reactome:R-HSA-2509831","MetaCyc:RXN0-1603"],"synonyms":[{"name":"XTP pyrophosphohydrolase activity","type":"exact"},{"name":"XTP/dITP diphosphatase","type":"related"},{"name":"XTPase activity","type":"exact"},{"name":"hypoxanthine/xanthine dNTP pyrophosphatase","type":"related"}],"termid":"GO:0036222","terms_by_termid":{"GO:0036222":null}}


id: PBO:0085020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nicotinate phosphoribosyltransferase; acts in the salvage pathway of NAD+ biosynthesis; required for silencing at rDNA and telomeres and has a role in silencing at mating-type loci; localized to the nucleus","termid":"PBO:0085020"}


id: PBO:0066647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras and Rab interactor 1","termid":"PBO:0066647"}


id: SO:0000757
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA synthesized from RNA by reverse transcriptase, single stranded.","direct_ancestors":[{"relation_name":"is_a","term_name":"cDNA","termid":"SO:0000756"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"single_stranded_cDNA","synonyms":[{"name":"single strand cDNA","type":"exact"},{"name":"single stranded cDNA","type":"exact"},{"name":"single-strand cDNA","type":"related"}],"termid":"SO:0000757"}


id: PBO:0047545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 7 pseudogene 4","termid":"PBO:0047545"}


id: GO:0050139
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinate + UDP-D-glucose = N-(beta-D-glucosyl)nicotinate + UDP.","definition_xrefs":["EC:2.4.1.196","RHEA:19437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016757","GO:0003824"],"is_obsolete":false,"name":"nicotinate-N-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01722","MetaCyc:NICOTINATE-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"UDP-glucose:nicotinic acid-N-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:nicotinate N-glucosyltransferase activity","type":"related"},{"name":"nicotinate glucosyltransferase activity","type":"broad"},{"name":"uridine diphosphoglucose-nicotinate N-glucosyltransferase activity","type":"related"}],"termid":"GO:0050139"}


id: MONDO:1010528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, horse","secondary_identifiers":["OMIA:000197-9796"],"termid":"MONDO:1010528","xrefs":{"Monarch":{"xref_id":"1010528"}}}


id: MONDO:0003263
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm that affects the cerebellum and occurs during childhood.","definition_xrefs":["NCIT:C5970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar neoplasm","termid":"MONDO:0002913"},{"relation_name":"is_a","term_name":"childhood infratentorial neoplasm","termid":"MONDO:0002915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"childhood cerebellar neoplasm","secondary_identifiers":["MEDGEN:234124","UMLS:C1332959","DOID:5059"],"synonyms":[{"name":"childhood cerebellar neoplasm","type":"exact"},{"name":"childhood cerebellar neoplasms","type":"exact"},{"name":"childhood cerebellar tumor","type":"exact"},{"name":"childhood cerebellar tumors","type":"exact"},{"name":"childhood cerebellar tumour","type":"exact"},{"name":"childhood cerebellar tumours","type":"exact"},{"name":"childhood neoplasm of cerebellum","type":"exact"},{"name":"childhood neoplasm of the cerebellum","type":"exact"},{"name":"childhood tumor of cerebellum","type":"exact"},{"name":"childhood tumor of the cerebellum","type":"exact"},{"name":"childhood tumour of cerebellum","type":"exact"},{"name":"childhood tumour of the cerebellum","type":"exact"},{"name":"paediatric cerebellar neoplasm","type":"exact"},{"name":"paediatric cerebellar tumour","type":"exact"},{"name":"paediatric neoplasm of cerebellum","type":"exact"},{"name":"paediatric neoplasm of the cerebellum","type":"exact"},{"name":"paediatric tumour of cerebellum","type":"exact"},{"name":"paediatric tumour of the cerebellum","type":"exact"},{"name":"pediatric cerebellar neoplasm","type":"exact"},{"name":"pediatric cerebellar tumor","type":"exact"},{"name":"pediatric neoplasm of cerebellum","type":"exact"},{"name":"pediatric neoplasm of the cerebellum","type":"exact"},{"name":"pediatric tumor of cerebellum","type":"exact"},{"name":"pediatric tumor of the cerebellum","type":"exact"}],"termid":"MONDO:0003263","xrefs":{"Monarch":{"xref_id":"0003263"}}}


id: PBO:0028558
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_mitotic_spindle","termid":"PBO:0028558"}


id: MONDO:0012822
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"colorectal cancer","termid":"MONDO:0005575"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 6","secondary_identifiers":["MEDGEN:436865","UMLS:C2677121","OMIM:612231"],"synonyms":[{"name":"CRCS6","type":"exact"},{"name":"colorectal cancer, susceptibility to, 6","type":"exact"},{"name":"colorectal cancer, susceptibility to, on chromosome 8Q23","type":"related"}],"termid":"MONDO:0012822","xrefs":{"Monarch":{"xref_id":"0012822"}}}


id: PBO:0058549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6128","termid":"PBO:0058549"}


id: SO:0002388
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A 5' UTR variant where a premature stop codon is gained in an upstream open reading frame.","definition_xrefs":["PMID:32461616","PMID:32926138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5_prime_UTR_uORF_stop_codon_variant","termid":"SO:0002386"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5_prime_UTR_uORF_stop_codon_gain_variant","synonyms":[{"name":"uSTOP_gained","type":"exact"}],"termid":"SO:0002388"}


id: MONDO:0700056
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fungal infectious disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal infectious disease, non-human animal","termid":"MONDO:0700056","xrefs":{"Monarch":{"xref_id":"0700056"}}}


id: PBO:0075207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein polypeptide G pseudogene 19","termid":"PBO:0075207"}


id: PBO:0002060
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 4","termid":"PBO:0002060"}


id: GO:0100044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates cellular hyperosmotic salinity response.","definition_xrefs":["GOC:cjm","GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of cellular hyperosmotic salinity response by transcription from RNA polymerase II promoter (obsolete GO:0100044)","termid":"GO:0100044"}


id: PBO:0038609
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA binding domain containing 5","termid":"PBO:0038609"}


id: PBO:0044741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 19B","termid":"PBO:0044741"}


id: PBO:0072518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 47","termid":"PBO:0072518"}


id: MONDO:1012085
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tetragametic chimerism, non-human animal","termid":"MONDO:1011918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, cattle","secondary_identifiers":["OMIA:000393-9913"],"termid":"MONDO:1012085","xrefs":{"Monarch":{"xref_id":"1012085"}}}


id: PATO:0001966
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curled quality inhering in a bearer by virtue of the bearer's one edge of its surface being wholly rolled up in another.","definition_xrefs":["ISBN:0881923214"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curled","termid":"PATO:0000405"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"convolute","termid":"PATO:0001966"}


id: GO:0045964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving dopamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of dopamine metabolic process","termid":"GO:0042053"},{"relation_name":"is_a","term_name":"positive regulation of catecholamine metabolic process","termid":"GO:0045915"},{"relation_name":"positively_regulates","term_name":"dopamine metabolic process","termid":"GO:0042417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dopamine metabolic process","synonyms":[{"name":"activation of dopamine metabolic process","type":"narrow"},{"name":"positive regulation of dopamine metabolism","type":"exact"},{"name":"stimulation of dopamine metabolic process","type":"narrow"},{"name":"up regulation of dopamine metabolic process","type":"exact"},{"name":"up-regulation of dopamine metabolic process","type":"exact"},{"name":"upregulation of dopamine metabolic process","type":"exact"}],"termid":"GO:0045964"}


id: PBO:0082983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosine deaminase; zinc metalloenzyme that catalyzes the hydrolytic deamination of cytosine to uracil; of biomedical interest because it also catalyzes the deamination of 5-fluorocytosine (5FC) to form anticancer drug 5-fluorouracil (5FU)","termid":"PBO:0082983"}


id: GO:0048464
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the flower calyx over time, from its formation to the mature structure.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral whorl development","termid":"GO:0048438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"flower calyx development","termid":"GO:0048464"}


id: PR:G2TRM1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC977.18 gene.","definition_xrefs":["UniProtKB:G2TRM1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0768 protein C977.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC977.18","synonyms":[{"name":"Spom972h-SPAC977.18","type":"exact"}],"termid":"PR:G2TRM1"}


id: FYPO:0004153
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of flocculation when the population is in stationary phase. Flocculation is the non-sexual aggregation of single cells.","definition_xrefs":["PomBase:mah","PMID:15047724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased flocculation in stationary phase","termid":"FYPO:0004153"}


id: PBO:0066541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 6","termid":"PBO:0066541"}


id: MONDO:0015437
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ring chromosome 21 syndrome is an autosomal anomaly characterized by variable clinical features, most commonly including growth retardation, developmental delay, intellectual disability, epilepsy, microcephaly, short stature, dysmorphic features, hypogammaglobulinemia, thrombocytopenia and unspecific skeletal anomalies (hemivertebrae, clinodactyly, syndactyly). In rare cases, it has been described in phenotypically normal individuals.","definition_xrefs":["Orphanet:1445"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ring chromosome disorder","termid":"MONDO:0700091"},{"relation_name":"is_a","term_name":"chromosome 21 disorder","termid":"MONDO:0700124"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring chromosome 21","secondary_identifiers":["NORD:947","SCTID:31325007","UMLS:C2931422","GARD:6083","MEDGEN:419409","MESH:C537109"],"synonyms":[{"name":"Chromosome 21 Ring","type":"exact"},{"name":"R21","type":"related"},{"name":"Ring 21","type":"related"},{"name":"Ring chromosome 21 syndrome","type":"related"},{"name":"Ring chromosome type 21","type":"exact"},{"name":"chromosome 21 en anneau","type":"exact"},{"name":"chromosome 21 ring","type":"related"}],"termid":"MONDO:0015437","xrefs":{"Monarch":{"xref_id":"0015437"}}}


id: FYPO:0005030
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which more ribonucleotides than normal are incorporated into the leading strand during mitotic DNA replication.","definition_xrefs":["PomBase:mah","PMID:25664722"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ribonucleotide incorporation into DNA","termid":"FYPO:0007680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0000293","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased ribonucleotide incorporation on leading strand","synonyms":[{"name":"increased rNMP incorporation on leading strand","type":"related"},{"name":"increased rNTP incorporation on leading strand","type":"related"},{"name":"increased ribonucleotide residue incorporation on leading strand","type":"exact"}],"termid":"FYPO:0005030"}


id: PBO:0048776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanosine monophosphate reductase","termid":"PBO:0048776"}


id: PBO:0050093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 3","termid":"PBO:0050093"}


id: GO:0036521
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism modulates the frequency, rate or extent of protein localisation to the host phagosome. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:25063865"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host protein localization to phagocytic vesicle (obsolete GO:0036521)","synonyms":[{"name":"modulation by symbiont of host protein localisation to phagosome","type":"related"}],"termid":"GO:0036521"}


id: GO:0000024
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of the disaccharide maltose (4-O-alpha-D-glucopyranosyl-D-glucopyranose).","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maltose metabolic process","termid":"GO:0000023"},{"relation_name":"is_a","term_name":"disaccharide biosynthetic process","termid":"GO:0046351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"maltose biosynthetic process","synonyms":[{"name":"malt sugar biosynthesis","type":"exact"},{"name":"malt sugar biosynthetic process","type":"exact"},{"name":"maltose anabolism","type":"exact"},{"name":"maltose biosynthesis","type":"exact"},{"name":"maltose formation","type":"exact"},{"name":"maltose synthesis","type":"exact"}],"termid":"GO:0000024"}


id: GO:0034221
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cell wall chitin, a linear polysaccharide consisting of P-1,4-linked N-acetyl-D-glucosamine residues, found in the walls of fungal cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete fungal-type cell wall chitin biosynthetic process (obsolete GO:0034221)","synonyms":[{"name":"fungal-type cell wall chitin anabolism","type":"exact"},{"name":"fungal-type cell wall chitin biosynthesis","type":"exact"},{"name":"fungal-type cell wall chitin formation","type":"exact"},{"name":"fungal-type cell wall chitin synthesis","type":"exact"}],"termid":"GO:0034221"}


id: RO:0002461
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"participates_in","termid":"RO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partner_in","termid":"RO:0002461"}


id: PBO:0062171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 14","termid":"PBO:0062171"}


id: POMBASE_GENE_EX_REL_INTERNAL:modified_residue
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"For internal PomBase use: modified residue position","definition_xrefs":["PomBase:kmr"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_residue","termid":"POMBASE_GENE_EX_REL_INTERNAL:modified_residue"}


id: MONDO:0003455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-invasive, papillary epithelial neoplasm that arises from the epithelium of the intrahepatic or extrahepatic bile ducts.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"intraductal papilloma","termid":"MONDO:0002060"},{"relation_name":"is_a","term_name":"bile duct neoplasm","termid":"MONDO:0021662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"bile duct papillary neoplasm","secondary_identifiers":["DOID:5468","ICDO:8503/0","NCIT:C6881","MEDGEN:360303","UMLS:C1879344"],"synonyms":[{"name":"IPN","type":"exact"},{"name":"bile duct papillary epithelial neoplasm","type":"exact"},{"name":"bile duct papillary neoplasm","type":"exact"},{"name":"bile duct papillomatosis","type":"exact"},{"name":"biliary papillomatosis","type":"exact"},{"name":"intraductal papillary neoplasm","type":"exact"}],"termid":"MONDO:0003455","xrefs":{"Monarch":{"xref_id":"0003455"}}}


