# terms

id: PBO:0001678
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.11.2","termid":"PBO:0001678"}


id: PBO:0069206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 461, pseudogene","termid":"PBO:0069206"}


id: PBO:0038743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actinin alpha 2","termid":"PBO:0038743"}


id: PBO:0088618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly factor 4 Sdh8","termid":"PBO:0088618"}


id: MONDO:0008201
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88733],"is_not":false,"summary":null,"term":"MONDO:0008201"}]},"cv_name":"mondo","definition":"Perry syndrome is a rare inherited neurodegenerative disorder characterized by rapidly progressive early-onset parkinsonism, central hypoventilation, weight loss, insomnia and depression.","definition_xrefs":["Orphanet:178509"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"},{"relation_name":"is_a","term_name":"DCTN1-related neurodegeneration","termid":"MONDO:0100624"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"Perry syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:168605","UMLS:C1868594","DOID:0060486","GARD:10453","SCTID:699184009","NANDO:1200547","icd11.foundation:1441227658","ICD9:348.89","MEDGEN:357007","MESH:C566822"],"synonyms":[{"name":"Parkinsonism with alveolar hypoventilation and mental depression","type":"exact"},{"name":"Perry syndrome","type":"exact"},{"name":"parkinsonism with alveolar hypoventilation and mental depression","type":"exact"}],"termid":"MONDO:0008201","terms_by_termid":{"MONDO:0008201":null},"xrefs":{"Monarch":{"xref_id":"0008201"}}}


id: MONDO:0958204
data:
  {"annotated_genes":["SJAG_00898"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89097],"is_not":false,"summary":null,"term":"MONDO:0958204"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00898":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0006025","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 81","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620700","UMLS:C5882758","MEDGEN:1844192"],"termid":"MONDO:0958204","terms_by_termid":{"MONDO:0958204":null},"xrefs":{"Monarch":{"xref_id":"0958204"}}}


id: PBO:0027477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-single_cell_division_prior_to_G0_entry","termid":"PBO:0027477"}


id: PBO:0082839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Constituent of the mitochondrial import motor; associated with the presequence translocase; function overlaps with that of Pam18p; stimulates the ATPase activity of Ssc1p to drive mitochondrial import; contains a J domain","termid":"PBO:0082839"}


id: GO:1905935
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell fate determination.","definition_xrefs":["GO_REF:0000058","PMID:25793578","GOC:bhm","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of cell fate determination","termid":"GO:1905933"},{"relation_name":"positively_regulates","term_name":"cell fate determination","termid":"GO:0001709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate determination","synonyms":[{"name":"activation of cell fate determination","type":"narrow"},{"name":"up regulation of cell fate determination","type":"exact"},{"name":"up-regulation of cell fate determination","type":"exact"},{"name":"upregulation of cell fate determination","type":"exact"}],"termid":"GO:1905935"}


id: GO:0099631
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The cytoplasmic component of the postsynaptic endocytic zone.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"postsynaptic endocytic zone","termid":"GO:0098843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"postsynaptic endocytic zone cytoplasmic component","termid":"GO:0099631"}


id: PBO:0031562
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_binding","termid":"PBO:0031562"}


id: PBO:0068051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 356","termid":"PBO:0068051"}


id: MONDO:1010950
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial adenomatous polyposis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial adenomatous polyposis, non-human animal","termid":"MONDO:1010215"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial adenomatous polyposis, dog","secondary_identifiers":["OMIA:001916-9615"],"termid":"MONDO:1010950","xrefs":{"Monarch":{"xref_id":"1010950"}}}


id: PBO:0054984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2398","termid":"PBO:0054984"}


id: PBO:0060593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCAM1 antisense RNA1","termid":"PBO:0060593"}


id: GO:0019165
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + thiamine = ADP + 2 H+ + thiamine phosphate.","definition_xrefs":["EC:2.7.1.89","RHEA:12012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"thiamine kinase activity","secondary_identifiers":["MetaCyc:THIKIN-RXN","KEGG_REACTION:R02134"],"synonyms":[{"name":"ATP:thiamin phosphotransferase activity","type":"related"},{"name":"ATP:thiamine phosphotransferase activity","type":"related"},{"name":"thiamin kinase (phosphorylating)","type":"related"},{"name":"thiamin kinase activity","type":"related"},{"name":"thiamin phosphokinase activity","type":"related"}],"termid":"GO:0019165"}


id: MONDO:0025419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A persistent skin infection marked by the presence of furuncles, often chronic and recurrent. In salmonid fish (salmonids), the pathogen is Aeromonas salmonicida.","definition_xrefs":["MESH:D005667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fish disease","termid":"MONDO:0024934"},{"relation_name":"is_a","term_name":"infectious disease, non-human animal","termid":"MONDO:0700049"},{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"furunculosis, fish","secondary_identifiers":["NCIT:C34629","icd11.foundation:1194531705"],"synonyms":[{"name":"boils","type":"related"},{"name":"furuncle","type":"related"},{"name":"furuncles","type":"related"},{"name":"furunculoses","type":"related"}],"termid":"MONDO:0025419","xrefs":{"Monarch":{"xref_id":"0025419"}}}


id: GO:0035191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The stepwise asymmetric spreading out of nuclei internally along the anterior-posterior axis of the developing insect embryo during mitotic cycles 4 to 6. This movement leads to the distribution of nuclei in a hollow ellipsoid underlying the cortex.","definition_xrefs":["PMID:8314839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syncytial nuclear migration","termid":"GO:0035190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nuclear axial expansion","synonyms":[{"name":"nuclear distribution along anterior-posterior axis","type":"exact"},{"name":"nucleus distribution along anterior-posterior axis","type":"exact"}],"termid":"GO:0035191"}


id: MONDO:0060758
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spinocerebellar ataxia type 42","termid":"MONDO:0014776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0002039"],"is_obsolete":false,"name":"spinocerebellar ataxia 42, early-onset, severe, with neurodevelopmental deficits","secondary_identifiers":["MEDGEN:1648308","OMIM:618087","UMLS:C4748120"],"synonyms":[{"name":"SCA42ND","type":"related"},{"name":"spinocerebellar ataxia 42, early-onset, severe, with neurodevelopmental deficits","type":"exact"}],"termid":"MONDO:0060758","xrefs":{"Monarch":{"xref_id":"0060758"}}}


id: PBO:0039608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANTXR cell adhesion molecule 1","termid":"PBO:0039608"}


id: PR:O74793
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC26H8.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C26H8.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.11c","synonyms":[{"name":"Spom972h-SPBC26H8.11c","type":"exact"}],"termid":"PR:O74793"}


id: GO:0033328
data:
  {"annotated_genes":["SJAG_03781"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92436],"is_not":false,"summary":null,"term":"GO:0033328"}]},"cv_name":"molecular_function","definition":"Binding to a peroxisomal membrane targeting sequence, any of several sequences of amino acids within a protein that can act as a signal for the localization of the protein into the peroxisome membrane.","definition_xrefs":["PMID:17020786","GOC:rb","PMID:15133130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxisome targeting sequence binding","termid":"GO:0000268"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03781":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005048"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005048","GO:0005488"],"is_obsolete":false,"name":"peroxisome membrane targeting sequence binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"PMP targeting signal (mPTS) binding","type":"exact"},{"name":"PMP targeting signal binding","type":"exact"},{"name":"mPTS binding","type":"exact"},{"name":"peroxisomal membrane protein (PMP) targeting signal (mPTS) binding","type":"exact"}],"termid":"GO:0033328","terms_by_termid":{"GO:0033328":null}}


id: MONDO:0020733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proximal symphalangism","termid":"MONDO:0008511"},{"relation_name":"is_a","term_name":"NOG-related symphalangism spectrum disorder","termid":"MONDO:0100521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"proximal symphalangism 1A","secondary_identifiers":["UMLS:C3714899","MEDGEN:811492","OMIM:185800","DOID:0080787"],"synonyms":[{"name":"Cushing symphalangism","type":"related"},{"name":"SYM1A","type":"related"},{"name":"Sym1","type":"related"},{"name":"hereditary absence of the proximal interphalangeal joints","type":"related"},{"name":"symphalangism, proximal, 1A","type":"related"},{"name":"symphalangism, proximal, type 1A","type":"related"}],"termid":"MONDO:0020733","xrefs":{"Monarch":{"xref_id":"0020733"}}}


id: MONDO:0005570
data:
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id: PBO:0001473
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein DNAJB family (predicted)","termid":"PBO:0001473"}


id: MOD:00489
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:117#C"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-arginine residue","termid":"MOD:00902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized arginine biotinylated with biotin-LC-hydrazide, reduced","synonyms":[{"name":"OxArgBiotinRed","type":"related"},{"name":"Oxidized arginine biotinylated with biotin-LC-hydrazide, reduced","type":"related"}],"termid":"MOD:00489"}


id: PBO:0001902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TatD DNase family Scn1","termid":"PBO:0001902"}


id: MONDO:0700196
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Melanoma that occurs in a fish.","definition_xrefs":["NCIT:C135006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fish disease","termid":"MONDO:0024934"},{"relation_name":"is_a","term_name":"melanoma, non-human animal","termid":"MONDO:0700132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fish melanoma","termid":"MONDO:0700196","xrefs":{"Monarch":{"xref_id":"0700196"}}}


id: PBO:0034231
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-shares_ancestor_with","termid":"PBO:0034231"}


id: PBO:0090970
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coproporphyrinogen III oxidase Hem13","termid":"PBO:0090970"}


id: PATO:0000804
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000804 motor performance value (obsolete PATO:0000804)","termid":"PATO:0000804"}


id: PBO:0081091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZDHHC20 intronic transcript 1","termid":"PBO:0081091"}


id: PBO:0044557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartyl-tRNA synthetase 2, mitochondrial","termid":"PBO:0044557"}


id: PBO:0062390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 11 pseudogene","termid":"PBO:0062390"}


id: PBO:0045565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 13","termid":"PBO:0045565"}


id: GO:0050548
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: trans-feruloyl-CoA + H2O = 4-hydroxy-3-methoxyphenyl-beta-hydroxypropionyl-CoA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-feruloyl-CoA hydratase activity (obsolete GO:0050548)","synonyms":[{"name":"4-hydroxy-3-methoxyphenyl-beta-hydroxypropanoyl-CoA hydro-lyase (trans-feruloyl-CoA-forming)","type":"related"},{"name":"trans-feruloyl-CoA hydro-lyase activity","type":"related"}],"termid":"GO:0050548"}


id: GO:0070696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a receptor that spans a cell membrane and possesses protein serine/threonine kinase activity.","definition_xrefs":["GOC:mah","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor serine/threonine kinase binding","termid":"GO:0033612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"transmembrane receptor protein serine/threonine kinase binding","termid":"GO:0070696"}


id: GO:0140295
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The activity of a pathogen-derived entity that interacts with a host receptor to activate effector-triggered immunity.","definition_xrefs":["PMID:20601497"],"direct_ancestors":[{"relation_name":"is_a","term_name":"receptor ligand activity","termid":"GO:0048018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0098772","GO:0005488","GO:0140677","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"pathogen-derived receptor ligand activity","synonyms":[{"name":"host-selective toxin","type":"related"},{"name":"innate receptor ligand activity","type":"related"},{"name":"necrotrophic effector","type":"related"}],"termid":"GO:0140295"}


id: PBO:0070406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication protein A2","termid":"PBO:0070406"}


id: GO:0141082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts the host reactive oxygen species (ROS)-mediated innate immune response by directly degrading host ROS. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["PMID:28288207","PMID:27825304","PMID:19684141"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont defense to host-produced reactive oxygen species","termid":"GO:0052164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated detoxification of host-generated reactive oxygen species","secondary_identifiers":["Reactome:R-HSA-1222538"],"termid":"GO:0141082"}


id: MONDO:0016174
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete paraneoplastic sensory ganglionopathy (obsolete MONDO:0016174)","secondary_identifiers":["Orphanet:208999"],"synonyms":[{"name":"paraneoplastic sensory neuronopathy","type":"exact"}],"termid":"MONDO:0016174","xrefs":{"Monarch":{"xref_id":"0016174"}}}


id: PBO:0090634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol cholinephosphotransferase/ diacylglycerol ethanolaminesphotransferase Ept1","termid":"PBO:0090634"}


id: PR:000085736
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription elongation factor spt5 (Schizosaccharomyces pombe) that lacks phosphorylation on the Thr residue of at least six C-terminal domain TPAWN consensus sequences.","definition_xrefs":["PMID:11893740","PMID:24939935","PRO:DAN","PomBase:VW"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spt5/UnPhos(CTD-T1)","pombase_gene_id":"SPAC23C4.19","synonyms":[{"name":"PomBase_original_PRO_term_name: transcription elongation factor spt5 unphosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-spt5/UnPhos:1","type":"exact"},{"name":"spt5/UnPhos(CTD-T1)","type":"exact"}],"termid":"PR:000085736"}


id: GO:0071744
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An IgE immunoglobulin complex that is present in the plasma membrane of B cells and is composed of two identical immunoglobulin heavy chains of the IgE isotype and two identical immunoglobulin light chains and a signaling subunit, a heterodimer of the Ig-alpha and Ig-beta proteins.","definition_xrefs":["ISBN:0781765196","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor complex","termid":"GO:0019815"},{"relation_name":"is_a","term_name":"IgE immunoglobulin complex","termid":"GO:0071742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"IgE B cell receptor complex","synonyms":[{"name":"membrane-bound IgE","type":"exact"},{"name":"surface IgE","type":"exact"}],"termid":"GO:0071744"}


id: GO:0032285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a non-myelinating glial cell membrane closes around an axon.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon ensheathment","termid":"GO:0008366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-myelinated axon ensheathment","synonyms":[{"name":"ensheathment of non-myelinated axons","type":"exact"}],"termid":"GO:0032285"}


id: PBO:0001982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitinase (predicted)","termid":"PBO:0001982"}


id: PBO:0066054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2C antisense RNA 1","termid":"PBO:0066054"}


id: GO:0052720
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages immediately 5' to an apurinic/apyrimidinic (AP; also called abasic) site within a deoxyribonucleic acid molecule by creating internal breaks, generating a single-strand break with 5'-deoxyribose phosphate and 3'-hydroxyl ends.","definition_xrefs":["PMID:1698278"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-(apurinic or apyrimidinic site) endonuclease activity","termid":"GO:0003906"},{"relation_name":"is_a","term_name":"DNA endonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016788","GO:0003824","GO:0140097","GO:0016787"],"is_obsolete":false,"name":"class II DNA-(apurinic or apyrimidinic site) endonuclease activity","secondary_identifiers":["GO:0140079"],"synonyms":[{"name":"class II AP endonuclease activity","type":"related"},{"name":"class II DNA-(apurinic or apyrimidinic site) lyase activity","type":"exact"}],"termid":"GO:0052720"}


id: GO:0047146
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sterigmatocystin + S-adenosyl-L-methionine = 7-O-methylsterigmatocystin + S-adenosyl-homocysteine.","definition_xrefs":["EC:2.1.1.110","MetaCyc:2.1.1.110-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"sterigmatocystin 7-O-methyltransferase activity","secondary_identifiers":["RHEA:15561"],"synonyms":[{"name":"O-methyltransferase II activity","type":"related"},{"name":"S-adenosyl-L-methionine:sterigmatocystin 7-O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:sterigmatocystin 8-O-methyltransferase activity","type":"related"},{"name":"sterigmatocystin 8-O-methyltransferase activity","type":"related"},{"name":"sterigmatocystin methyltransferase activity","type":"related"}],"termid":"GO:0047146"}


id: PBO:0046321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1 pseudogene 2","termid":"PBO:0046321"}


id: PBO:0084137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"High-affinity copper transporter of the plasma membrane; acts as a trimer; gene is disrupted by a Ty2 transposon insertion in many laboratory strains of S. cerevisiae","termid":"PBO:0084137"}


id: RO:0002431
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c involved in or regulates p if and only if either (i) c is involved in p or (ii) c is involved in regulation of p","direct_ancestors":[{"relation_name":"is_a","term_name":"acts_upstream_of_or_within","termid":"RO:0002264"},{"relation_name":"is_a","term_name":"functionally_related_to","termid":"RO:0002328"},{"relation_name":"is_a","term_name":"causal_agent_in","termid":"RO:0002500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"involved_in_or_involved_in_regulation_of","termid":"RO:0002431"}


id: PBO:0078405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon CCC) 1-1","termid":"PBO:0078405"}


id: GO:0004615
data:
  {"annotated_genes":["SJAG_02783"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[81139],"is_not":false,"summary":null,"term":"GO:0004615"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-mannose 1-phosphate = D-mannose 6-phosphate.","definition_xrefs":["EC:5.4.2.8","RHEA:11140"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular phosphotransferase activity","termid":"GO:0016868"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02783":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"phosphomannomutase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-3781926","KEGG_REACTION:R01818","GO:0008971","MetaCyc:PHOSMANMUT-RXN","Reactome:R-HSA-446201"],"synonyms":[{"name":"D-mannose 1,6-phosphomutase activity","type":"related"},{"name":"alpha-D-mannose 1,6-phosphomutase activity","type":"related"},{"name":"mannose phosphomutase activity","type":"related"},{"name":"phosphomannose mutase activity","type":"related"}],"termid":"GO:0004615","terms_by_termid":{"GO:0004615":null}}


id: MONDO:1012442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant melanoma, non-human animal","termid":"MONDO:1011821"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma, dog","secondary_identifiers":["OMIA:001724-9615"],"termid":"MONDO:1012442","xrefs":{"Monarch":{"xref_id":"1012442"}}}


id: PBO:0074313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD3 divergent transcript","termid":"PBO:0074313"}


id: PR:P41390
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An amidophosphoribosyltransferase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR11907:SF0","PRO:DNx","OMA:SCHPO02227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amidophosphoribosyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.08c","secondary_identifiers":["UniProtKB:P41390"],"synonyms":[{"name":"ATase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPAT","type":"exact"},{"name":"glutamine phosphoribosylpyrophosphate amidotransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P41390"}


id: MOD:01404
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-asparagine residue to form L-asparagine thiazole-4-carboxylic acid.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0481"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"didehydrogenated residue","termid":"MOD:01888"},{"relation_name":"is_a","term_name":"crosslinked L-asparagine residue","termid":"MOD:02042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-asparagine thiazole-4-carboxylic acid","synonyms":[{"name":"2-[(1S)-1,3-diamino-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1,3-bisazanyl-3-oxopropyl]-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazole-4-carboxylic acid (Asn-Cys)","type":"exact"},{"name":"L-asparagine thiazole-4-carboxylic acid","type":"exact"}],"termid":"MOD:01404"}


id: GO:0090361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the appearance of any platelet-derived growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"platelet-derived growth factor production","termid":"GO:0090360"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of platelet-derived growth factor production","termid":"GO:0090361"}


id: GO:0036494
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, or increases the frequency, rate or extent of translation initiation as a result of endoplasmic reticulum stress.","definition_xrefs":["GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of translational initiation in response to stress","termid":"GO:0032058"},{"relation_name":"is_a","term_name":"regulation of translation initiation in response to endoplasmic reticulum stress","termid":"GO:0036491"},{"relation_name":"is_a","term_name":"positive regulation of translation in response to endoplasmic reticulum stress","termid":"GO:0036493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of translation initiation in response to endoplasmic reticulum stress","synonyms":[{"name":"positive regulation of translation initiation in response to ER stress","type":"exact"}],"termid":"GO:0036494"}


id: GO:0044450
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of a microtubule organizing center, a region in a eukaryotic cell, such as a centrosome or basal body, from which microtubules grow.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete microtubule organizing center part (obsolete GO:0044450)","synonyms":[{"name":"MTOC component","type":"exact"},{"name":"microtubule organizing centre component","type":"exact"}],"termid":"GO:0044450"}


id: PBO:0027080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_cell_population_growth_during_glucose_starvation","termid":"PBO:0027080"}


id: GO:0014744
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of muscle adaptation.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"positively_regulates","term_name":"muscle adaptation","termid":"GO:0043500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of muscle adaptation","synonyms":[{"name":"positive regulation of muscle plasticity","type":"related"}],"termid":"GO:0014744"}


id: GO:0038107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by a nodal protein binding of to an activin receptor on the surface of a target cell, which contributes to the establishment of an organism's body plan or part of an organism with respect to the left and right halves.","definition_xrefs":["PMID:17287255","PMID:20413706","PMID:12857784","GOC:vk","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete nodal signaling pathway involved in determination of left/right asymmetry (obsolete GO:0038107)","synonyms":[{"name":"nodal signalling pathway involved in determination of left/right asymmetry","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter by nodal signaling pathway, involved in determination of left/right symmetry","type":"exact"}],"termid":"GO:0038107"}


id: PBO:0042860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 90","termid":"PBO:0042860"}


id: GO:0034641
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving various organic and inorganic nitrogenous compounds, as carried out by individual cells.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular nitrogen compound metabolic process (obsolete GO:0034641)","synonyms":[{"name":"cellular nitrogen compound metabolism","type":"exact"}],"termid":"GO:0034641"}


id: PBO:0038460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutyrate aminotransferase","termid":"PBO:0038460"}


id: PBO:0075055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-18","termid":"PBO:0075055"}


id: PBO:0057182
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 337","termid":"PBO:0057182"}


id: GO:1902275
data:
  {"annotated_genes":["SJAG_02622","SJAG_01111","SJAG_02990","SJAG_03624","SJAG_02592","SJAG_01599","SJAG_04005","SJAG_02381","SJAG_03255","SJAG_04369","SJAG_01867","SJAG_00142","SJAG_05313","SJAG_02165","SJAG_02723","SJAG_02342","SJAG_01511","SJAG_03664","SJAG_03787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[97904,92763,109478,112661,117068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120262"},{"annotations":[108685,79290],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061188"},{"annotations":[110528],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060906"},{"annotations":[100977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031453"},{"annotations":[93194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090053"},{"annotations":[112394,93195,96383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090055"},{"annotations":[100579,92820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031445"},{"annotations":[99195,102324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090052"},{"annotations":[119819],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010964"},{"annotations":[102325,93879,120190,119820,99196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902801"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of chromatin organization.","definition_xrefs":["GOC:bf","GO_REF:0000058","PMID:18314879","GOC:vw","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular component organization","termid":"GO:0051128"},{"relation_name":"regulates","term_name":"chromatin organization","termid":"GO:0006325"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00142":null,"SJAG_01111":null,"SJAG_01511":null,"SJAG_01599":null,"SJAG_01867":null,"SJAG_02165":null,"SJAG_02342":null,"SJAG_02381":null,"SJAG_02592":null,"SJAG_02622":null,"SJAG_02723":null,"SJAG_02990":null,"SJAG_03255":null,"SJAG_03624":null,"SJAG_03664":null,"SJAG_03787":null,"SJAG_04005":null,"SJAG_04369":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"regulation of chromatin organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0001672","GO:1903308"],"synonyms":[{"name":"regulation of chromatin assembly or disassembly","type":"related"},{"name":"regulation of chromatin assembly/disassembly","type":"related"},{"name":"regulation of chromatin modification","type":"related"},{"name":"regulation of chromatin organisation","type":"exact"},{"name":"regulation of establishment or maintenance of chromatin architecture","type":"exact"}],"termid":"GO:1902275","terms_by_termid":{"GO:0010964":null,"GO:0031445":null,"GO:0031453":null,"GO:0060906":null,"GO:0061188":null,"GO:0090052":null,"GO:0090053":null,"GO:0090055":null,"GO:0120262":null,"GO:1902801":null}}


id: PBO:0036414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anoctamin calcium-activated chloride channel OR Ca(2+)-activated phospholipid scramblase involved in ER-plasma membrane tethering Ist2 (predicted)","termid":"PBO:0036414"}


id: PBO:0078963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-6","termid":"PBO:0078963"}


id: PBO:0063167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAXBP1 antisense RNA 1","termid":"PBO:0063167"}


id: MONDO:0020118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dense granule disease (obsolete MONDO:0020118)","secondary_identifiers":["Orphanet:98456","icd11.foundation:1930060978"],"synonyms":[{"name":"Delta granule disease","type":"exact"}],"termid":"MONDO:0020118","xrefs":{"Monarch":{"xref_id":"0020118"}}}


id: GO:0043107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled movement of a bacterial cell which is dependent on the presence of type IV pili. Includes social gliding motility and twitching motility.","definition_xrefs":["GOC:go_curators","PMID:12704238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type IV pilus-dependent motility","synonyms":[{"name":"TFP-dependent motility","type":"exact"},{"name":"TFP-dependent movement","type":"exact"},{"name":"social gliding motility","type":"narrow"},{"name":"twitching motility","type":"narrow"},{"name":"type 4 pilus-dependent motility","type":"exact"},{"name":"type four pilus-dependent motility","type":"exact"}],"termid":"GO:0043107"}


id: PBO:0117065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMA1 antisense RNA 1","termid":"PBO:0117065"}


id: PBO:0117119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC35F4 antisense RNA 1","termid":"PBO:0117119"}


id: GO:2000257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein activation cascade.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein maturation","termid":"GO:1903317"},{"relation_name":"regulates","term_name":"protein activation cascade","termid":"GO:0072376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0051604"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0051604","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of protein activation cascade","synonyms":[{"name":"regulation of protein activation pathway","type":"exact"},{"name":"regulation of protein activitory cascade","type":"exact"}],"termid":"GO:2000257"}


id: MONDO:0014703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Adams-Oliver syndrome in which the cause of the disease is a mutation in the DLL4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Adams-Oliver syndrome","termid":"MONDO:0007034"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"Adams-Oliver syndrome 6","secondary_identifiers":["OMIM:616589","GARD:16142","UMLS:C4225271","MEDGEN:908556"],"synonyms":[{"name":"AOS6","type":"related"},{"name":"Adams-Oliver syndrome 6","type":"exact"},{"name":"Adams-Oliver syndrome caused by mutation in DLL4","type":"exact"},{"name":"Adams-Oliver syndrome type 6","type":"exact"},{"name":"DLL4 Adams-Oliver syndrome","type":"exact"}],"termid":"MONDO:0014703","xrefs":{"Monarch":{"xref_id":"0014703"}}}


id: PBO:0116827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S small subunit processome assembly factor Faf1","termid":"PBO:0116827"}


id: PBO:0077695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNK2 antisense RNA 1","termid":"PBO:0077695"}


id: GO:0048106
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Orientation along the body surface of bristles, sensory organs originating from a sensory organ precursor cell, such that they all point in a uniform direction.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:jid","FBbt:00004298","GOC:tb","FBbt:00004408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of body hair or bristle planar orientation","termid":"GO:0048104"},{"relation_name":"part_of","term_name":"chaeta morphogenesis","termid":"GO:0008407"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"establishment of thoracic bristle planar orientation","synonyms":[{"name":"establishment of body bristle planar orientation","type":"exact"}],"termid":"GO:0048106"}


id: GO:0035145
data:
  {"annotated_genes":["SJAG_01852","SJAG_05014","SJAG_02879","SJAG_01252","SJAG_04025","SJAG_00888"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72432,79124,82139,94371,105177,107916],"is_not":false,"summary":null,"term":"GO:0035145"}]},"cv_name":"cellular_component","definition":"A multi-subunit complex deposited by the spliceosome upstream of messenger RNA exon-exon junctions. The exon-exon junction complex provides a binding platform for factors involved in mRNA export and nonsense-mediated mRNA decay.","definition_xrefs":["PMID:11532962","PMID:11743026"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00888":null,"SJAG_01252":null,"SJAG_01852":null,"SJAG_02879":null,"SJAG_04025":null,"SJAG_05014":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"exon-exon junction complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"EJC","type":"exact"},{"name":"exon junction complex","type":"exact"}],"termid":"GO:0035145","terms_by_termid":{"GO:0035145":null}}


id: PBO:0029193
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-split_kinetochore","termid":"PBO:0029193"}


id: GO:0016846
data:
  {"annotated_genes":["SJAG_03199","SJAG_04008","SJAG_03671","SJAG_04726","SJAG_05256","SJAG_03856","SJAG_02205"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72481],"is_not":false,"summary":null,"term":"GO:0016846"},{"annotations":[70148],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047804"},{"annotations":[72888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990411"},{"annotations":[74798,79156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004408"},{"annotations":[70004],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004462"},{"annotations":[97548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051907"}]},"cv_name":"molecular_function","definition":"Catalysis of the elimination of hydrogen sulfide or substituted H2S.","definition_xrefs":["EC:4.4.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lyase activity","termid":"GO:0016829"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02205":null,"SJAG_03199":null,"SJAG_03671":null,"SJAG_03856":null,"SJAG_04008":null,"SJAG_04726":null,"SJAG_05256":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"carbon-sulfur lyase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1614567"],"synonyms":[{"name":"carbon-sulphur lyase activity","type":"exact"}],"termid":"GO:0016846","terms_by_termid":{"GO:0004408":null,"GO:0004462":null,"GO:0016846":null,"GO:0047804":null,"GO:0051907":null,"GO:1990411":null}}


id: MONDO:0957273
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant intermediate Charcot-Marie-Tooth disease","termid":"MONDO:0019548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005244"],"is_obsolete":false,"name":"Charcot-Marie-Tooth disease, dominant intermediate A","secondary_identifiers":["OMIM:620378","MEDGEN:376235","UMLS:C1847896"],"termid":"MONDO:0957273","xrefs":{"Monarch":{"xref_id":"0957273"}}}


id: PBO:0080307
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 71 pseudogene","termid":"PBO:0080307"}


id: GO:0038172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-33 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:jc","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"interleukin-33-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9014843"],"synonyms":[{"name":"IL-33-mediated signaling pathway","type":"exact"},{"name":"IL33 signaling pathway","type":"exact"},{"name":"interleukin-33 signaling pathway","type":"related"},{"name":"interleukin-33-mediated signalling pathway","type":"exact"}],"termid":"GO:0038172"}


id: MONDO:0019676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by incomplete development (hypoplasia) or absence of the outermost bones of the fingers and toes (distal phalanges) and nails. Additional features may include hypoplasia of the middle phalanges, fusion of the joints (symphalangism), broad thumbs, and webbed fingers (syndactyly). The feet are often less severely affected than the hands. There are 2 types of this condition, designated as type 1 and 2. BDB type 1 is caused by mutations in the ROR2 gene. BDB type 2 is caused by mutations in the NOG gene. Inheritance of both types is autosomal dominant. Treatment may include surgery if the condition affects hand function, or for cosmetic reasons.","definition_xrefs":["GARD:0000985"],"direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type B","secondary_identifiers":["MEDGEN:722046","icd11.foundation:1534264812","Orphanet:93383","SCTID:389168002","GARD:985","UMLS:C1300267"],"termid":"MONDO:0019676","xrefs":{"Monarch":{"xref_id":"0019676"}}}


id: GO:0018219
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of peptidyl-cysteine to form peptidyl-S-acetyl-L-cysteine.","definition_xrefs":["RESID:AA0056"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine S-acetylation (obsolete GO:0018219)","termid":"GO:0018219"}


id: GO:0000964
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in forming the mature 5' end of an RNA molecule transcribed from a mitochondrial genome; occurs in the mitochondrion.","definition_xrefs":["GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"RNA 5'-end processing","termid":"GO:0000966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0140053"}],"interesting_parent_ids":["GO:0008150","GO:0140053","GO:0010467"],"is_obsolete":false,"name":"mitochondrial RNA 5'-end processing","synonyms":[{"name":"mitochondrial RNA 5' end processing","type":"related"}],"termid":"GO:0000964"}


id: PBO:0039161
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase 6","termid":"PBO:0039161"}


id: FYPO:0005608
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which ubiquitination of lysine at position 119 of histone H2B occurs to a lower extent than normal in regions surrounding double-strand DNA breaks. Lysine 119 corresponds to the conserved C-terminal lysine of H2B.","definition_xrefs":["PMID:27098497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein ubiquitination during vegetative growth","termid":"FYPO:0002768"},{"relation_name":"is_a","term_name":"decreased histone H2B-K119 ubiquitination during vegetative growth","termid":"FYPO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002494","FYPO:0001320","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased histone H2B-K119 ubiquitination at double-strand break site during vegetative growth","synonyms":[{"name":"decreased histone H2B conserved C-terminal lysine ubiquitination at double-strand break site during vegetative growth","type":"exact"},{"name":"decreased histone H2B-K119 ubiquitination at DSB during vegetative growth","type":"exact"},{"name":"decreased histone H2B-K119 ubiquitination at double-strand break site during mitotic cell cycle","type":"related"},{"name":"decreased histone H2B-K119 ubiquitination at site of double-strand break during vegetative growth","type":"exact"},{"name":"reduced histone H2B-K119 ubiquitination at double-strand break during vegetative growth","type":"exact"}],"termid":"FYPO:0005608"}


id: PR:Q10106
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A U3 small nucleolar RNA-associated protein 11 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00917","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 small nucleolar RNA-associated protein 11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC18G6.06","secondary_identifiers":["UniProtKB:Q10106"],"synonyms":[{"name":"Spom972h-UTP11L","type":"exact"},{"name":"U3 snoRNA-associated protein 11 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10106"}


id: MOD:01017
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"OBSOLETE because redundant and identical to MOD:00403. Remap to MOD:00403.","definition_xrefs":["DeltaMass:113"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE MOD:01017 homoseryl (-Hse-) (obsolete MOD:01017)","termid":"MOD:01017"}


id: GO:1990546
data:
  {"annotated_genes":["SJAG_01872","SJAG_00275"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73630,74496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006843"}]},"cv_name":"biological_process","definition":"The process in which a tricarboxylic acid is transported across a mitochondrial membrane, into or out of the mitochondrion.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tricarboxylic acid transmembrane transport","termid":"GO:0035674"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00275":null,"SJAG_01872":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0055085","GO:0051179"],"is_obsolete":false,"name":"mitochondrial tricarboxylic acid transmembrane transport","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990546","terms_by_termid":{"GO:0006843":null}}


id: GO:0015135
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glucuronate from one side of a membrane to the other. Glucuronate is the uronic acid formally derived from glucose by oxidation of the hydroxymethylene group at C-6 to a carboxyl group.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"glucuronate transmembrane transporter activity","termid":"GO:0015135"}


id: GO:0033516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-methionine from other compounds, including homoserine, via the intermediates O-phospho-L-homoserine and cystathionine.","definition_xrefs":["MetaCyc:PWY-702","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-methionine biosynthetic process from L-homoserine via cystathionine","termid":"GO:0019279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006790","GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-methionine biosynthetic process from homoserine via O-phospho-L-homoserine and cystathionine","synonyms":[{"name":"L-methionine anabolism from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine formation from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"L-methionine synthesis from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"},{"name":"methionine biosynthetic process from homoserine via O-phospho-L-homoserine and cystathionine","type":"exact"}],"termid":"GO:0033516"}


id: GO:1990304
data:
  {"annotated_genes":["SJAG_00910"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78499],"is_not":false,"summary":null,"term":"GO:1990304"}]},"cv_name":"cellular_component","definition":"A ubiquitin ligase complex consisting of MUB1, RAD6 and UBR2 components. It ubiquitinates, and targets for destruction, the RPN4 transcription factor, which upregulates the proteasome genes. The binding of MUB1 may position the RPN4 ubiquitylation site proximal to the Ubiquitin-RAD6 thioester and allow the transfer of Ubiquitin from RAD6 to RPN4. One of its components, MUB1, is a short-lived protein ubiquitinated by the UBR2-RAD6 ubiquitin conjugating enzyme.","definition_xrefs":["PMID:18070918","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00910":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"MUB1-RAD6-UBR2 ubiquitin ligase complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:1990304","terms_by_termid":{"GO:1990304":null}}


id: MONDO:0015752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by severe intellectual deficit, kyphosis with onset in childhood and cataract with onset in late adolescence.","definition_xrefs":["Orphanet:171860"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability-cataracts-kyphosis syndrome","termid":"MONDO:0015752","xrefs":{"Monarch":{"xref_id":"0015752"}}}


id: PR:O13747
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A BRCA1-associated protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01471","PRO:DNx","PANTHER:PTHR24007:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RING finger protein ETP1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC16E8.13","secondary_identifiers":["UniProtKB:O13747"],"synonyms":[{"name":"BRAP2 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-BRAP","type":"exact"}],"termid":"PR:O13747"}


id: PBO:0111335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1754 family, human FAM32A homolog, implicated in mRNA splicing or surveillance","termid":"PBO:0111335"}


id: GO:0002305
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD8-positive, gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta intraepithelial T cell differentiation","termid":"GO:0002304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD8-positive, gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"CD8-positive, gamma-delta intraepithelial T cell development","type":"related"},{"name":"CD8-positive, gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD8-positive, gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002305"}


id: MONDO:0019387
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Macrostomia-preauricular tags-external ophthalmoplegia syndrome combines macrostomia or abnormal mouth contour, preauricular tags, uni- or bilateral ptosis and external ophthalmoplegia. It was described in nine members of a Brazilian family. It is a new phenotype belonging to the so-called oculoauriculovertebral spectrum, resulting from a branchial arch anomaly. Transmission is autosomal dominant.","definition_xrefs":["Orphanet:83619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macrostomia-preauricular tags-external ophthalmoplegia syndrome","secondary_identifiers":["GARD:19044","MEDGEN:1391725","UMLS:C4509840"],"termid":"MONDO:0019387","xrefs":{"Monarch":{"xref_id":"0019387"}}}


id: MONDO:0009320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hall-Riggs syndrome is a very rare syndrome consisting of microcephaly with facial dysmorphism, spondylometaepiphyseal dysplasia and severe intellectual deficit.","definition_xrefs":["Orphanet:2107"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hall-Riggs syndrome","secondary_identifiers":["GARD:2586","MEDGEN:341089","MESH:C535623","SCTID:721008000","OMIM:234250","UMLS:C1856198"],"synonyms":[{"name":"HALL-Riggs intellectual disability syndrome","type":"related"},{"name":"HALL-Riggs mental retardation syndrome","type":"related"},{"name":"Hall Riggs intellectual disability syndrome","type":"related"},{"name":"Hall Riggs mental retardation syndrome","type":"related"}],"termid":"MONDO:0009320","xrefs":{"Monarch":{"xref_id":"0009320"}}}


id: PBO:0069260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 516, pseudogene","termid":"PBO:0069260"}


id: PBO:0038445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aralkylamine N-acetyltransferase","termid":"PBO:0038445"}


id: PATO:0005005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Shape quality inhering in a bearer expanding outward, or having parts expanding outward, from a center point.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"radiating","termid":"PATO:0005005"}


id: MONDO:1010881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neuronal ceroid lipofuscinosis that occurs in sheep due to a mutation in the CLN6 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuronal ceroid lipofuscinosis, sheep","termid":"MONDO:1011578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal ceroid lipofuscinosis, CLN6-related, sheep","secondary_identifiers":["OMIA:001443-9940"],"synonyms":[{"name":"CLN6","type":"exact"},{"name":"neuronal ceroid lipofuscinosis, 6, sheep","type":"related"}],"termid":"MONDO:1010881","xrefs":{"Monarch":{"xref_id":"1010881"}}}


id: PBO:0038570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABO, alpha 1-3-N-acetylgalactosaminyltransferase and alpha 1-3-galactosyltransferase","termid":"PBO:0038570"}


id: PBO:0049129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor class C group 6 member A","termid":"PBO:0049129"}


id: PBO:0044829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 116","termid":"PBO:0044829"}


id: PBO:0026726
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_mitotic_spindle_pole_body_during_metaphase","termid":"PBO:0026726"}


id: PBO:0117059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NELL1 antisense RNA 1","termid":"PBO:0117059"}


id: FYPO:0007827
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin contractile ring organization is normal (i.e. indistinguishable from wild type). The process results in the assembly, arrangement of constituent parts, or disassembly of the actomyosin contractile ring.","definition_xrefs":["GO:0044837","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"},{"relation_name":"is_a","term_name":"normal cell cycle process","termid":"FYPO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal actomyosin contractile ring organization","synonyms":[{"name":"normal actomyosin contractile ring organisation","type":"exact"},{"name":"normal actomyosin contractile ring organization during mitotic cell cycle","type":"related"},{"name":"normal actomyosin contractile ring organization during vegetative growth","type":"exact"},{"name":"normal contractile ring organization","type":"exact"}],"termid":"FYPO:0007827"}


id: PBO:0088277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"delta-1-pyrroline-5-carboxylate reductase Pro3","termid":"PBO:0088277"}


id: FYPO:0005430
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patches cluster together more than normal.","definition_xrefs":["PMID:8522609","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized actin cortical patches during vegetative growth","termid":"FYPO:0003988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"aggregated actin cortical patches during vegetative growth","synonyms":[{"name":"actin cortical patch aggregation during vegetative growth","type":"related"},{"name":"aggregated F-actin patches during vegetative growth","type":"exact"},{"name":"aggregated actin cortical patch distribution during vegetative growth","type":"exact"},{"name":"aggregated actin cortical patch localisation during vegetative growth","type":"exact"},{"name":"aggregated actin cortical patch localization during vegetative growth","type":"exact"},{"name":"aggregated actin cortical patches during mitotic cell cycle","type":"related"},{"name":"aggregated actin patches during vegetative growth","type":"exact"}],"termid":"FYPO:0005430"}


id: MONDO:0024302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition resulting from accidental ingestion of leeches in drinking water. They may attach themselves to the wall of the pharynx, nasal cavity, or larynx.","direct_ancestors":[{"relation_name":"is_a","term_name":"hirudiniasis","termid":"MONDO:0001191"},{"relation_name":"is_a","term_name":"upper digestive tract disorder","termid":"MONDO:0044991"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"internal hirudiniasis","secondary_identifiers":["MEDGEN:578592","UMLS:C0348999","SCTID:187227006","ICD10CM:B83.4","icd11.foundation:1840948804"],"termid":"MONDO:0024302","xrefs":{"Monarch":{"xref_id":"0024302"}}}


id: GO:0051752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: [(1->4)-6-phospho-alpha-D-glucosyl](n) + n ATP + n H2O = [(1->4)-3,6-bisphospho-alpha-alpha-glucosyl](n) + n AMP + 2n H+ + n phosphate.","definition_xrefs":["RHEA:10256","PMID:15618411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, paired acceptors","termid":"GO:0016781"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"phosphoglucan, water dikinase activity","secondary_identifiers":["MetaCyc:2.7.9.5-RXN","EC:2.7.9.5"],"synonyms":[{"name":"ATP:phospho-alpha-glucan, water phosphotransferase activity","type":"related"},{"name":"OK1","type":"related"},{"name":"PWD","type":"related"}],"termid":"GO:0051752"}


id: MONDO:0958119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare central nervous system embryonal tumor characterized by embryonal cells arranged in multilayered rosettes and displaying one of three morphological patterns: embryonal tumor with abundant neuropil and true rosettes, ependymoblastoma, or medulloepithelioma. The tumors typically have a C19MC alteration or (rarely) a DICER1 mutation and correspond to WHO grade IV. They are mostly localized intracranially, rarely in the spinal cord, and commonly cause signs and symptoms of elevated intracranial pressure, sometimes seizures and focal neurological signs. Most cases occur in children during the first two years of life.","definition_xrefs":["Orphanet:656417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system Ewing sarcoma/peripheral primitive neuroectodermal tumor","termid":"MONDO:0016713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"embryonal tumor with multilayered rosettes","secondary_identifiers":["UMLS:C5575350","MEDGEN:1804732","NCIT:C186534","GARD:6352"],"termid":"MONDO:0958119","xrefs":{"Monarch":{"xref_id":"0958119"}}}


id: SO:0001486
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The status of a whole genome sequence, where the data is minimally filtered or un-filtered, from any number of sequencing platforms, and is assembled into contigs. Genome sequence of this quality may harbour regions of poor quality and can be relatively incomplete.","definition_xrefs":["DOI:10.1126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"whole_genome_sequence_status","termid":"SO:0001499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"standard_draft","synonyms":[{"name":"standard draft","type":"exact"}],"termid":"SO:0001486"}


id: GO:0009692
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ethylene (C2-H4, ethene), a simple hydrocarbon gas that can function in plants as a growth regulator.","definition_xrefs":["ISBN:0387969845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene metabolic process","termid":"GO:0043449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ethylene metabolic process","synonyms":[{"name":"ethene metabolic process","type":"exact"},{"name":"ethene metabolism","type":"exact"},{"name":"ethylene metabolism","type":"exact"}],"termid":"GO:0009692"}


id: PBO:0075707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRGAP2 antisense RNA 1","termid":"PBO:0075707"}


id: GO:0047837
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-xylose + NADP+ = D-xylono-1,5-lactone + H+ + NADPH.","definition_xrefs":["RHEA:22000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"D-xylose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["MetaCyc:D-XYLOSE-1-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.179","KEGG_REACTION:R01430"],"synonyms":[{"name":"D-xylose (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"related"},{"name":"D-xylose-NADP dehydrogenase activity","type":"related"},{"name":"D-xylose:NADP+ 1-oxidoreductase activity","type":"related"},{"name":"D-xylose:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0047837"}


id: MONDO:0011830
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly due to LIS1 mutation is a cerebral malformation with epilepsy characterized predominantly by posterior isolated lissencephaly with developmental delay, intellectual disability and epilepsy that usually evolves from West syndrome to Lennox-Gastaut syndrome. Additional features include muscular hypotonia, acquired microcephaly, failure to thrive and poor control of airways leading to aspiration pneumonia.","definition_xrefs":["Orphanet:95232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"classic lissencephaly","termid":"MONDO:0015146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"lissencephaly due to LIS1 mutation","secondary_identifiers":["UMLS:C4749301","DOID:0112237","GARD:16838","OMIM:607432","MEDGEN:1657090"],"synonyms":[{"name":"LIS1","type":"related"},{"name":"PAFAH1B1-related lissencephaly","type":"exact"},{"name":"lissencephaly 1","type":"related"},{"name":"lissencephaly sequence, isolated","type":"related"},{"name":"lissencephaly, classic","type":"related"},{"name":"subcortical band heterotopia","type":"related"},{"name":"subcortical laminar heterotopia","type":"related"}],"termid":"MONDO:0011830","xrefs":{"Monarch":{"xref_id":"0011830"}}}


id: MONDO:0016771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Annular atrophic lichen planus (LP) is a rare variant of cutaneous lichen planus characterized by both annular and atrophic LP features in the same lesion.","definition_xrefs":["Orphanet:254411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lichen planus","termid":"MONDO:0006572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"annular atrophic lichen planus","secondary_identifiers":["MEDGEN:929706","SCTID:720493003","GARD:12676","UMLS:C4304037"],"synonyms":[{"name":"annular atrophic LP","type":"exact"}],"termid":"MONDO:0016771","xrefs":{"Monarch":{"xref_id":"0016771"}}}


id: GO:0002306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a CD4-positive, gamma-delta intraepithelial T cell. Intraepithelial T cells are found among epithelial cells in mucosal areas and have distinct phenotypes and developmental pathways.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gamma-delta intraepithelial T cell differentiation","termid":"GO:0002304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"CD4-positive gamma-delta intraepithelial T cell differentiation","synonyms":[{"name":"CD4-positive, gamma-delta intraepithelial T cell development","type":"related"},{"name":"CD4-positive, gamma-delta intraepithelial T lymphocyte differentiation","type":"exact"},{"name":"CD4-positive, gamma-delta intraepithelial T-cell differentiation","type":"exact"},{"name":"CD4-positive, gamma-delta intraepithelial T-lymphocyte differentiation","type":"exact"}],"termid":"GO:0002306"}


id: PBO:0067938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 240","termid":"PBO:0067938"}


id: MONDO:0030474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterotaxy, visceral, 10, autosomal, with male infertility","secondary_identifiers":["OMIM:619607","MEDGEN:1794282","UMLS:C5562072","DOID:0051024"],"synonyms":[{"name":"HTX10","type":"exact"}],"termid":"MONDO:0030474","xrefs":{"Monarch":{"xref_id":"0030474"}}}


id: PBO:0036040
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_SRP-dependent_cotranslational_protein_targeting_to_membrane_during_vegetative_growth","termid":"PBO:0036040"}


id: GO:0018231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of peptidyl-cysteine to form peptidyl-S-diacylglycerol-L-cysteine; the oleate and palmitate actually represent mixtures of saturated (generally at 3') and unsaturated (generally at 2') fatty acids.","definition_xrefs":["RESID:AA0107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-cysteine modification","termid":"GO:0018198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-S-diacylglycerol-L-cysteine biosynthetic process from peptidyl-cysteine","synonyms":[{"name":"peptidyl-S-diacylglycerol-L-cysteine anabolism from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diacylglycerol-L-cysteine formation from peptidyl-cysteine","type":"exact"},{"name":"peptidyl-S-diacylglycerol-L-cysteine synthesis from peptidyl-cysteine","type":"exact"}],"termid":"GO:0018231"}


id: MONDO:0020741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"pyridoxine-dependent epilepsy","termid":"MONDO:0009945"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"pyridoxine-dependent epilepsy caused by ALDH7A1 mutant","secondary_identifiers":["OMIM:266100","DOID:0070519"],"synonyms":[{"name":"AASA dehydrogenase deficiency","type":"related"},{"name":"EPD","type":"related"},{"name":"Epd","type":"related"},{"name":"epilepsy, pyridoxine-dependent","type":"related"},{"name":"pyridoxine dependency with seizures","type":"related"},{"name":"pyridoxine-dependent epilepsy","type":"related"},{"name":"pyridoxine-dependent epilepsy caused by ALDH7A1 mutant","type":"exact"}],"termid":"MONDO:0020741","xrefs":{"Monarch":{"xref_id":"0020741"}}}


id: GO:1902613
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of anti-Mullerian hormone signaling pathway.","definition_xrefs":["PMID:23624077","GO_REF:0000058","GOC:hjd","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090101"},{"relation_name":"is_a","term_name":"regulation of anti-Mullerian hormone signaling pathway","termid":"GO:1902612"},{"relation_name":"negatively_regulates","term_name":"anti-Mullerian hormone receptor signaling pathway","termid":"GO:1990262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of anti-Mullerian hormone signaling pathway","synonyms":[{"name":"down regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"down-regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"downregulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"inhibition of anti-Mullerian hormone signaling pathway","type":"narrow"}],"termid":"GO:1902613"}


id: PBO:0058986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MLLT10 histone lysine methyltransferase DOT1L cofactor","termid":"PBO:0058986"}


id: GO:0007096
data:
  {"annotated_genes":["SJAG_03048","SJAG_01801","SJAG_01050","SJAG_04597","SJAG_02736","SJAG_04464","SJAG_04943","SJAG_00082","SJAG_03126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72268,73127,78526,113069],"is_not":false,"summary":null,"term":"GO:0007096"},{"annotations":[80870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031578"},{"annotations":[104382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001100"},{"annotations":[104389,92007,114018,95762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031536"}]},"cv_name":"biological_process","definition":"Any process involved in the progression from anaphase/telophase to G1 that is associated with a conversion from high to low mitotic CDK activity.","definition_xrefs":["GOC:rn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mitotic cell cycle phase transition","termid":"GO:1901990"},{"relation_name":"regulates","term_name":"exit from mitosis","termid":"GO:0010458"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01050":null,"SJAG_01801":null,"SJAG_02736":null,"SJAG_03048":null,"SJAG_03126":null,"SJAG_04464":null,"SJAG_04597":null,"SJAG_04943":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0044772","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"regulation of exit from mitosis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176409"],"termid":"GO:0007096","terms_by_termid":{"GO:0001100":null,"GO:0007096":null,"GO:0031536":null,"GO:0031578":null}}


id: FYPO:0000348
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype characterized by altered spore morphology, i.e. the size, shape, or structure of the spore is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell morphology","termid":"FYPO:0000005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abnormal spore morphology","termid":"FYPO:0000348"}


id: PBO:0056282
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosidase beta","termid":"PBO:0056282"}


id: MONDO:0009644
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency","termid":"MONDO:0020480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066"],"is_obsolete":false,"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","secondary_identifiers":["MESH:C565373","PMID:10053004","Orphanet:308393","UMLS:C1854989","OMIM:252160","DOID:0111163","GARD:17387","MEDGEN:340760"],"synonyms":[{"name":"MOCOD type B","type":"exact"},{"name":"MOCODB","type":"exact"},{"name":"combined deficiency of sulfite oxidase, xanthine dehydrogenase and aldehyde oxidase type B","type":"exact"},{"name":"molybdenum cofactor deficiency B","type":"exact"},{"name":"molybdenum cofactor deficiency complementation group B","type":"exact"},{"name":"molybdenum cofactor deficiency type B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group B","type":"related"},{"name":"molybdenum cofactor deficiency, complementation group type B","type":"exact"},{"name":"sulfite oxidase deficiency due to molybdenum cofactor deficiency type B","type":"exact"}],"termid":"MONDO:0009644","xrefs":{"Monarch":{"xref_id":"0009644"}}}


id: GO:0140040
data:
  {"annotated_genes":["SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111942],"is_not":false,"summary":null,"term":"GO:0140040"}]},"cv_name":"biological_process","definition":"The conversion of polycistronic RNA transcribed from a mitochondrial genome into mono- or bi-cistronic RNAs.","definition_xrefs":["PMID:20211597"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0140053"],"is_obsolete":false,"name":"mitochondrial polycistronic RNA processing","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140040","terms_by_termid":{"GO:0140040":null}}


id: PBO:0074713
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 74D","termid":"PBO:0074713"}


id: MONDO:0008237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Phocomelia-ectrodactyly-deafness-sinus arrhythmia syndrome is characterized by phocomelia (involving arms more severely), ectrodactyly, ear anomalies (bilateral anomalies of the pinnae), conductive deafness, dysmorphism (long and prominent philtrum, mild maxillary hypoplasia) and sinus arrhythmia. It has been described in four patients (a father and his son and a mother and her daughter) from two unrelated families.","definition_xrefs":["Orphanet:2878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"phocomelia-ectrodactyly-deafness-sinus arrhythmia syndrome","secondary_identifiers":["GARD:4323","MESH:C537498","MEDGEN:356961","UMLS:C1868390","OMIM:171480"],"synonyms":[{"name":"Stoll-LC)vy-Francfort syndrome","type":"exact"},{"name":"Stoll-Lévy-Francfort syndrome","type":"exact"},{"name":"Stoll-levy-Francfort syndrome","type":"related"},{"name":"facioauriculoradial dysplasia","type":"related"},{"name":"phocomelia ectrodactyly deafness sinus arrhythmia","type":"related"},{"name":"phocomelia-ectrodactyly, EAR malformation, deafness, and sinus arrhythmia","type":"related"}],"termid":"MONDO:0008237","xrefs":{"Monarch":{"xref_id":"0008237"}}}


id: GO:1902821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 1-undecene.","definition_xrefs":["GOC:mengo_curators","PMID:16013377","GOC:TermGenie","GO_REF:0000068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkene biosynthetic process","termid":"GO:0043450"},{"relation_name":"is_a","term_name":"1-undecene metabolic process","termid":"GO:1902820"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"1-undecene biosynthetic process","synonyms":[{"name":"1-undecene anabolism","type":"exact"},{"name":"1-undecene biosynthesis","type":"exact"},{"name":"1-undecene formation","type":"exact"},{"name":"1-undecene synthesis","type":"exact"}],"termid":"GO:1902821"}


id: _global:immediately_causally_downstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_downstream_of","termid":"_global:causally_downstream_of"},{"relation_name":"is_a","term_name":"immediately_preceded_by","termid":"_global:immediately_preceded_by"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immediately_causally_downstream_of","secondary_identifiers":["RO:0002405"],"termid":"_global:immediately_causally_downstream_of"}


id: MONDO:0019638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia is a form of renal malformation in which the kidney(s) are present but their development is abnormal and incomplete. Renal dysplasia can be unilateral or bilateral, segmental, and of variable severity, with renal aplasia corresponding to extreme dysplasia.","definition_xrefs":["Orphanet:93108"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"renal dysplasia","secondary_identifiers":["NANDO:2200161","HP:0000110","icd11.foundation:921320354","UMLS:C3536714","MEDGEN:760690","ICD10CM:Q61.4","GARD:19173"],"synonyms":[{"name":"renal dysplasia","type":"exact"},{"name":"renal dysplasia (disease)","type":"exact"}],"termid":"MONDO:0019638","xrefs":{"Monarch":{"xref_id":"0019638"}}}


id: PBO:0089758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP-associated protein Utp5","termid":"PBO:0089758"}


id: MONDO:0004317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multiple meningiomas that arises from the spinal meninges.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraspinal meningioma","termid":"MONDO:0001279"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple spinal canal and spinal cord meningioma","secondary_identifiers":["DOID:7646","NCIT:C5275","MEDGEN:235341","UMLS:C1334825"],"synonyms":[{"name":"multiple Meningiomas of spinal canal and spinal cord","type":"exact"},{"name":"multiple intraspinal Meningiomas","type":"exact"},{"name":"multiple meningiomas of the spinal canal and spinal cord","type":"exact"},{"name":"multiple spinal canal and spinal cord Meningiomas","type":"exact"}],"termid":"MONDO:0004317","xrefs":{"Monarch":{"xref_id":"0004317"}}}


id: PBO:0069501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 768, pseudogene","termid":"PBO:0069501"}


id: PBO:0070891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17","termid":"PBO:0070891"}


id: PR:Q9UTR9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- asa1 gene.","definition_xrefs":["UniProtKB:Q9UTR9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ASTRA-associated protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1006.02","synonyms":[{"name":"Spom972h-asa1","type":"exact"}],"termid":"PR:Q9UTR9"}


id: MONDO:0032930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with poor growth and with or without seizures or ataxia","secondary_identifiers":["OMIM:618808","UMLS:C5394135","MEDGEN:1711370"],"synonyms":[{"name":"IDPOGSA","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH POOR GROWTH AND WITH OR WITHOUT SEIZURES OR ATAXIA","type":"related"}],"termid":"MONDO:0032930","xrefs":{"Monarch":{"xref_id":"0032930"}}}


id: PBO:0069936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1229, pseudogene","termid":"PBO:0069936"}


id: GO:1903723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of centriole elongation.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:20616062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"regulation of centriole elongation","termid":"GO:1903722"},{"relation_name":"negatively_regulates","term_name":"centriole elongation","termid":"GO:0061511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"negative regulation of centriole elongation","synonyms":[{"name":"down regulation of centriole elongation","type":"exact"},{"name":"down-regulation of centriole elongation","type":"exact"},{"name":"downregulation of centriole elongation","type":"exact"},{"name":"inhibition of centriole elongation","type":"narrow"}],"termid":"GO:1903723"}


id: GO:0045264
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. All non-F1 subunits of the plasma membrane hydrogen-transporting ATP synthase, including integral and peripheral plasma membrane proteins.","definition_xrefs":["GOC:mtg_sensu","PMID:10838056","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete plasma membrane proton-transporting ATP synthase complex, coupling factor F(o) (obsolete GO:0045264)","synonyms":[{"name":"hydrogen-transporting ATP synthase, F0 sector","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(0)","type":"broad"},{"name":"proton-transporting ATP synthase complex, coupling factor F(o)","type":"broad"}],"termid":"GO:0045264"}


id: PBO:0092012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA Arginine (ucu), mitochondrial","termid":"PBO:0092012"}


id: MOD:00841
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification produced by formation of an adduct with an isothiocyanate compound.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiocyanate reagent derivatized residue","termid":"MOD:00841"}


id: PBO:0039534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 35","termid":"PBO:0039534"}


id: PR:Q9Y884
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pek1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP kinase kinase skh1/pek1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC543.07","synonyms":[{"name":"Spom972h-pek1","type":"exact"}],"termid":"PR:Q9Y884"}


id: PBO:0045296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 48","termid":"PBO:0045296"}


id: PBO:0011518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial trancriptional repressor protein BolA domain (predicted)","termid":"PBO:0011518"}


id: GO:1904868
data:
  {"annotated_genes":["SJAG_05979","SJAG_04586"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66316,109971],"is_not":false,"summary":null,"term":"GO:1904868"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a telomerase catalytic core complex.","definition_xrefs":["GOC:rph","GOC:BHF_telomere","GOC:TermGenie","GOC:BHF","GO_REF:0000079","PMID:26586433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomerase holoenzyme complex assembly","termid":"GO:1905323"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04586":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"telomerase catalytic core complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"TERT-TERC complex assembly","type":"related"},{"name":"TERT-TERC complex formation","type":"related"},{"name":"telomerase catalytic core complex formation","type":"exact"}],"termid":"GO:1904868","terms_by_termid":{"GO:1904868":null}}


id: PBO:0056735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mesoderm specific transcript pseudogene 4","termid":"PBO:0056735"}


id: GO:0102122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: gibberellin A34 + S-adenosyl-L-methionine = gibberellin A34 methyl ester + S-adenosyl-L-homocysteine.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete gibberellin A34 carboxyl methyltransferase activity (obsolete GO:0102122)","termid":"GO:0102122"}


id: PBO:0045266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1","termid":"PBO:0045266"}


id: GO:1901108
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of granaticin.","definition_xrefs":["GOC:TermGenie","UniPathway:UPA00175","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide catabolic process","termid":"GO:0030640"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"},{"relation_name":"is_a","term_name":"granaticin metabolic process","termid":"GO:1901107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"granaticin catabolic process","synonyms":[{"name":"granaticin breakdown","type":"exact"},{"name":"granaticin catabolism","type":"exact"},{"name":"granaticin degradation","type":"exact"}],"termid":"GO:1901108"}


id: MOD:00276
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between two cysteine residues, a lysine residue, and the porphyrin compound heme b, (7,12-diethenyl-3,8,13,17-tetramethylporphyrin-2,18-dipropanoato)iron.","definition_xrefs":["PubMed:12709052","PubMed:9237682","RESID:AA0271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyrin modified residue","termid":"MOD:00699"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-lysine residue","termid":"MOD:02074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"heme P460-bis-L-cysteine-L-lysine","synonyms":[{"name":"(19S,20S)-[7,12-bis((S)-1-[((R)-2-amino-2-carboxy)ethylsulfanyl]ethyl)-20-([(S)-5-amino-5-carboxypentyl]amino)-3,8,13,17-tetramethyl-21H,23H-19,20-dihydroporphine-2,18-bis(2-carboxyethyl)-N21,N22,N23,N24]-ferrate","type":"exact"},{"name":"BINDING Heme (covalent; via 3 links)","type":"exact"},{"name":"bis(S-cysteinyl)-N6-lysino-heme","type":"exact"},{"name":"heme P460-bis-L-cysteine-L-lysine","type":"exact"}],"termid":"MOD:00276"}


id: PBO:0078224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 11-2","termid":"PBO:0078224"}


id: GO:2000678
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of transcription regulatory region DNA binding.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA binding","termid":"GO:0043392"},{"relation_name":"is_a","term_name":"regulation of transcription regulatory region DNA binding","termid":"GO:2000677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of transcription regulatory region DNA binding","termid":"GO:2000678"}


id: FYPO:0005996
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any ribosomal RNA (rRNA) primary transcript, rRNA precursor or processing intermediate, or mature rRNA measured in a cell differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"altered rRNA or precursor level","synonyms":[{"name":"abnormal rRNA or precursor level","type":"exact"},{"name":"altered rRNA or precursor accumulation","type":"related"},{"name":"altered rRNA or precursor level during mitotic cell cycle","type":"related"},{"name":"altered rRNA or precursor level during vegetative growth","type":"exact"},{"name":"altered rRNA or precursor transcript level","type":"exact"}],"termid":"FYPO:0005996"}


id: PBO:0055403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2833","termid":"PBO:0055403"}


id: GO:0035646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of substances from endosomes to the melanosome, a specialised lysosome-related organelle.","definition_xrefs":["PMID:16162817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to pigment granule transport","termid":"GO:0043485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"endosome to melanosome transport","termid":"GO:0035646"}


id: MONDO:0016423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune polyendocrinopathy","termid":"MONDO:0017278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune polyendocrinopathy type 4","secondary_identifiers":["icd11.foundation:1561026337","UMLS:C3266026","MEDGEN:757804","GARD:20567","ICD9:258.1","Orphanet:227990","SCTID:449730005"],"synonyms":[{"name":"APS type 4","type":"exact"},{"name":"APS4","type":"exact"},{"name":"autoimmune polyendocrine syndrome type 4","type":"exact"},{"name":"autoimmune polyglandular syndrome type 4","type":"exact"}],"termid":"MONDO:0016423","xrefs":{"Monarch":{"xref_id":"0016423"}}}


id: PBO:0070528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 27","termid":"PBO:0070528"}


id: PBO:0059656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 22","termid":"PBO:0059656"}


id: PBO:0078646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon CTT) 2-2","termid":"PBO:0078646"}


id: PBO:0049947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoxia inducible factor 1 subunit alpha","termid":"PBO:0049947"}


id: PBO:0052326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KIAA1549 like","termid":"PBO:0052326"}


id: GO:0140842
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + RNA polymerase II large subunit CTD heptapeptide repeat (YSPTSPS) = UDP + RNA polymerase II large subunit CTD heptapeptide repeat 3-O-(N-acetyl-D-glucosaminyl)-L-serine (position 5).","definition_xrefs":["PMID:22605332"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II C-terminal domain O-GlcNAc transferase activity","termid":"GO:0140841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016740","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"RNA polymerase II C-terminal domain S5 O-GlcNAc transferase activity","termid":"GO:0140842"}


id: PBO:0068744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5D small nuclear 1","termid":"PBO:0068744"}


id: GO:0038091
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by vascular endothelial growth factor (VEGF) binding to a platelet-derived growth factor receptor (PDGFR) on the surface of a cell, which activates or increases the frequency, rate or extent of cell proliferation.","definition_xrefs":["PMID:17470632","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"is_a","term_name":"VEGF-activated platelet-derived growth factor receptor signaling pathway","termid":"GO:0038086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signaling pathway","synonyms":[{"name":"VEGF-A-induced cell proliferation","type":"narrow"},{"name":"positive regulation of cell proliferation by VEGF-activated platelet derived growth factor receptor signalling pathway","type":"exact"},{"name":"positive regulation of cell proliferation by VEGF/PDGFR signaling pathway","type":"exact"}],"termid":"GO:0038091"}


id: SO:0002020
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Boundary elements are DNA motifs that prevent heterochromatin from spreading into neighboring euchromatic regions.","definition_xrefs":["PMID:24013502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulator","termid":"SO:0000627"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"boundary_element","synonyms":[{"name":"boundary element","type":"exact"},{"name":"insulator","type":"related"}],"termid":"SO:0002020"}


id: GO:0003014
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An organ system process carried out by any of the organs or tissues of the renal system. The renal system maintains fluid balance, and contributes to electrolyte balance, acid/base balance, and disposal of nitrogenous waste products. In humans, the renal system comprises a pair of kidneys, a pair of ureters, urinary bladder, urethra, sphincter muscle and associated blood vessels; in other species, the renal system may comprise related structures (e.g., nephrocytes and malpighian tubules in Drosophila).","definition_xrefs":["GOC:cjm","GOC:mtg_cardio","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"system process","termid":"GO:0003008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"renal system process","synonyms":[{"name":"excretory system process","type":"exact"},{"name":"kidney system process","type":"related"}],"termid":"GO:0003014"}


id: PBO:0080204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vezatin, adherens junctions transmembrane protein","termid":"PBO:0080204"}


id: PBO:0029947
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_tyrosine_phosphorylation_during_cellular_response_to_osmotic_stress","termid":"PBO:0029947"}


id: PR:Q8NKC2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- eno102 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q8NKC2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enolase 1-2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPB21E7.01c","synonyms":[{"name":"2-phospho-D-glycerate hydro-lyase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"2-phosphoglycerate dehydratase 1-2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-eno102","type":"exact"}],"termid":"PR:Q8NKC2"}


id: PBO:0001300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mdm10/Mdm12/Mmm1 complex subunit Mdm10 (predicted)","termid":"PBO:0001300"}


id: GO:1990889
data:
  {"annotated_genes":["SJAG_00545"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109963],"is_not":false,"summary":null,"term":"GO:1990889"}]},"cv_name":"molecular_function","definition":"A histone reader that recognizes a histone H4 trimethylated at lysine 20.","definition_xrefs":["PMID:20943666","PMID:22150589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H4 reader activity","termid":"GO:0140008"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00545":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0030674"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140566"}],"interesting_parent_ids":["GO:0003674","GO:0060090","GO:0140566","GO:0030674"],"is_obsolete":false,"name":"histone H4K20me3 reader activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"H4K20me3 modified histone binding","type":"narrow"}],"termid":"GO:1990889","terms_by_termid":{"GO:1990889":null}}


id: GO:0005528
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a 23-membered macrolide lactone FK506.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide binding","termid":"GO:0005527"},{"relation_name":"is_a","term_name":"amide binding","termid":"GO:0033218"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"FK506 binding","synonyms":[{"name":"FK506-sensitive peptidyl-prolyl cis-trans isomerase","type":"related"}],"termid":"GO:0005528"}


id: PBO:0072360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S26 pseudogene 46","termid":"PBO:0072360"}


id: GO:0016755
data:
  {"annotated_genes":["SJAG_05012","SJAG_00903","SJAG_01854","SJAG_01533","SJAG_00819","SJAG_03302","SJAG_00855","SJAG_02347","SJAG_02169","SJAG_02299","SJAG_00208","SJAG_01360","SJAG_00111","SJAG_01507","SJAG_04309","SJAG_03112","SJAG_04600","SJAG_03615","SJAG_02575","SJAG_05323","SJAG_05236","SJAG_01900","SJAG_04619","SJAG_03657","SJAG_02851","SJAG_01992","SJAG_01253","SJAG_04151","SJAG_03968","SJAG_00209","SJAG_01679","SJAG_03883","SJAG_02746","SJAG_04990","SJAG_03387","SJAG_05022","SJAG_04966","SJAG_02319","SJAG_00727","SJAG_00173","SJAG_00475","SJAG_02705","SJAG_03006","SJAG_03005","SJAG_02685","SJAG_05340","SJAG_03136","SJAG_01212","SJAG_04857","SJAG_01776","SJAG_00931","SJAG_02603","SJAG_01018","SJAG_05264","SJAG_02652","SJAG_05274","SJAG_02082","SJAG_00604","SJAG_04573","SJAG_03191","SJAG_00509","SJAG_01772","SJAG_00300","SJAG_03175","SJAG_04516","SJAG_00293","SJAG_00341","SJAG_06309","SJAG_03613","SJAG_04783","SJAG_02521","SJAG_01561","SJAG_03860","SJAG_03970","SJAG_01165","SJAG_03831","SJAG_01593","SJAG_02918","SJAG_04612","SJAG_00435","SJAG_04915","SJAG_01251","SJAG_02668","SJAG_00561","SJAG_00500","SJAG_00188","SJAG_00552","SJAG_04429","SJAG_01535","SJAG_01637","SJAG_02308","SJAG_02371","SJAG_03618","SJAG_03324","SJAG_03250","SJAG_02415"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004057"},{"annotations":[94923],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061651"},{"annotations":[80790],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141046"},{"annotations":[112324,111821,74033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019776"},{"annotations":[110758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016603"},{"annotations":[72804],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016756"},{"annotations":[120929,118272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140850"},{"annotations":[96361],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140851"},{"annotations":[120477],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061654"},{"annotations":[77627,106499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061656"},{"annotations":[106377,74470,74451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061665"},{"annotations":[79474,66635,90178,76309,118848,90021,73269,79953,89804,75372,116333,104278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061631"},{"annotations":[76238,115454,90022,105438,119271,118764,67121,92213,92737,78574,57393,62133,95576,93552,98795,64455,67174,73448,112016,90646,91734,74914,80645,75521,77290,78273,100549,73790,81934,90994,79377,79412,77578,58904,120520,81461,107270,80719,63415,101407,105044,114144,71236,75115,65856,90319,111684,105423,116388,118765,81100,110046,76337,77322,114877,74701,71123,108986,76241,90032,73887,80140,106378,103330],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061630"},{"annotations":[93517,106907,109226,115696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061659"},{"annotations":[73078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004842"},{"annotations":[76746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034450"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino-acyl group from one compound (donor) to another (acceptor).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase 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id: PBO:0082932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic aspartyl aminopeptidase with possible vacuole function; Cvt pathway cargo protein; cleaves unblocked N-terminal acidic amino acids from peptide substrates; forms a 12-subunit homo-oligomer; M18 metalloprotease family","termid":"PBO:0082932"}


id: PBO:0068715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4atac small nuclear 4, pseudogene","termid":"PBO:0068715"}


id: MONDO:0001649
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection of the esophagus caused by fungi, most often candida albicans and candida tropicalis. It usually affects patients with immunodeficiency disorders or diabetes mellitus. Symptoms include dysphagia and pain on swallowing.","definition_xrefs":["NCIT:C27107"],"direct_ancestors":[{"relation_name":"is_a","term_name":"esophagitis","termid":"MONDO:0001409"},{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"},{"relation_name":"is_a","term_name":"digestive system infectious disorder","termid":"MONDO:0043424"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"fungal esophagitis","secondary_identifiers":["ICD9:117.9","UMLS:C0341109","MEDGEN:90960","SCTID:235602008","DOID:13147"],"synonyms":[{"name":"fungal esophagitis","type":"exact"}],"termid":"MONDO:0001649","xrefs":{"Monarch":{"xref_id":"0001649"}}}


id: PBO:0082862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Core Sm protein Sm D1; part of heteroheptameric complex (with Smb1p, Smd2p, Smd3p, Sme1p, Smx3p, and Smx2p) that is part of the spliceosomal U1, U2, U4, and U5 snRNPs; relocalizes to the cytosol in response to hypoxia; homolog of human Sm D1; protein abundance increases in response to DNA replication stress","termid":"PBO:0082862"}


id: PBO:0039298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG12 alpha-1,6-mannosyltransferase","termid":"PBO:0039298"}


id: FYPO:0008018
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing glutamine as the nitrogen source.","definition_xrefs":["PMID:7903653","PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on glutamine nitrogen source","synonyms":[{"name":"normal cell population growth on glutamine nitrogen source","type":"exact"}],"termid":"FYPO:0008018"}


id: MONDO:0022496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by severe intrauterine growth retardation, psychomotor delay and recurrent infections, craniofacial dysostosis, a progeroid appearance, arthrogryposis and camptodactylia.","definition_xrefs":["PMID:196478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthrogryposis IUGR thoracic dystrophy","synonyms":[{"name":"Van Bervliet syndrome","type":"related"}],"termid":"MONDO:0022496","xrefs":{"Monarch":{"xref_id":"0022496"}}}


id: MONDO:0003560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenosquamous pancreas carcinoma (obsolete MONDO:0003560)","termid":"MONDO:0003560","xrefs":{"Monarch":{"xref_id":"0003560"}}}


id: PBO:0044066
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin 9-like pseudogene 2","termid":"PBO:0044066"}


id: FYPO:0002596
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone H2A phosphorylation occurs to a greater extent than normal. All histone H2A phosphorylation may be affected, or phosphorylation of specific sites on histone H2A may be increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone phosphorylation during vegetative growth","termid":"FYPO:0002591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H2A phosphorylation during vegetative growth","synonyms":[{"name":"increased histone H2A phosphorylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0002596"}


id: PBO:0070912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 20","termid":"PBO:0070912"}


id: PATO:0001353
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A density quality which inheres in a bearer by virtue of some influence exerted by the bearer's mass on a given volume.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Mass_density"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mass density","termid":"PATO:0001019"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"volumetric density","termid":"PATO:0001353"}


id: GO:0120172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of actin filament bundle convergence involved in mitotic contractile ring assembly.","definition_xrefs":["PMID:24798735","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of actin filament bundle convergence involved in mitotic contractile ring assembly (obsolete GO:0120172)","termid":"GO:0120172"}


id: PBO:0120446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAN2A2 antisense RNA 1","termid":"PBO:0120446"}


id: PBO:0063869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol glycan anchor biosynthesis class B","termid":"PBO:0063869"}


id: PBO:0087028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L13B; not essential for viability; homologous to mammalian ribosomal protein L13, no bacterial homolog; RPL13B has a paralog, RPL13A, that arose from the whole genome duplication","termid":"PBO:0087028"}


id: SO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Epoxyqueuosine is a modified 7-deazoguanosine.","direct_ancestors":[{"relation_name":"is_a","term_name":"seven_deazaguanosine","termid":"SO:0001316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epoxyqueuosine","secondary_identifiers":["RNAMOD:044"],"synonyms":[{"name":"eQ","type":"exact"}],"termid":"SO:0001318"}


id: PBO:0049484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H1.8 linker histone","termid":"PBO:0049484"}


id: PBO:0053537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 539","termid":"PBO:0053537"}


id: PBO:0111381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Llp1","termid":"PBO:0111381"}


id: PBO:0080408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS37B subunit of ESCRT-I","termid":"PBO:0080408"}


id: GO:0019538
data:
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id: MOD:01489
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id: PBO:0014272
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id: PBO:0038282
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id: MONDO:0003183
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id: PBO:0067021
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id: PBO:0062794
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id: FYPO:0003095
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id: PBO:0040542
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id: PBO:0046831
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id: MONDO:0004668
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id: GO:2000177
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id: GO:0072205
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id: GO:2000190
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id: FYPO:0006720
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id: MONDO:0019053
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Signs and symptoms include developmental delays, intellectual disability, characteristic facial dysmorphic features, hepatomegaly, and hypotonia.","definition_xrefs":["NCIT:C85005"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00702":null,"SJAG_00891":null,"SJAG_01165":null,"SJAG_02384":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02788":null,"SJAG_02848":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04763":null,"SJAG_04823":null,"SJAG_05950":null},"genotype_count":0,"in_subsets":["pombe_mondo_slim"],"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"peroxisomal disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:782299726","ICD9:277.89","Orphanet:68373","DOID:906","MEDGEN:129185","SCTID:238059005","UMLS:C0282528","GARD:18885","ICD9:277.86","NANDO:1200758","NANDO:2100166"],"synonyms":[{"name":"disorder of peroxisomal function","type":"exact"},{"name":"peroxisomal disease","type":"exact"},{"name":"peroxisomal disorder","type":"exact"},{"name":"peroxisomal function disorder","type":"exact"}],"termid":"MONDO:0019053","terms_by_termid":{"MONDO:0008736":null,"MONDO:0008953":null,"MONDO:0008954":null,"MONDO:0008972":null,"MONDO:0009958":null,"MONDO:0009959":null,"MONDO:0011101":null,"MONDO:0013571":null,"MONDO:0013726":null,"MONDO:0013927":null,"MONDO:0013930":null,"MONDO:0013931":null,"MONDO:0013936":null,"MONDO:0013937":null,"MONDO:0013938":null,"MONDO:0013939":null,"MONDO:0013942":null,"MONDO:0013943":null,"MONDO:0013945":null,"MONDO:0013948":null,"MONDO:0013949":null,"MONDO:0013950":null,"MONDO:0013951":null,"MONDO:0013952":null,"MONDO:0013967":null,"MONDO:0014743":null,"MONDO:0054549":null},"xrefs":{"Monarch":{"xref_id":"0019053"}}}


id: PBO:0087550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of RNA polymerase III transcription initiation factor complex; part of TauB domain of TFIIIC that binds DNA at BoxB promoter sites of tRNA and similar genes; cooperates with Tfc6p in DNA binding; largest of six subunits of RNA polymerase III transcription initiation factor complex (TFIIIC); colocalizes with condensin at pol III genes and several ETC (extra TFIIIC) sites; may have a role in recruiting or stabilizing Scc2/4 and condensin on chromosomes","termid":"PBO:0087550"}


id: PBO:0067656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 833, pseudogene","termid":"PBO:0067656"}


id: PBO:0079188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 17, pseudogene","termid":"PBO:0079188"}


id: GO:0039608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus prevents or reduces the frequency, rate or extent of activity of a host translation initiation factor by promoting dephosphorylation of a host protein.","definition_xrefs":["PMID:12239292","PMID:8643618"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host translation initiation factor activity by induction of host protein dephosphorylation (obsolete GO:0039608)","termid":"GO:0039608"}


id: PBO:0065958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD23 homolog B, nucleotide excision repair protein","termid":"PBO:0065958"}


id: PBO:0072627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R-spondin 2","termid":"PBO:0072627"}


id: PBO:0048691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI pathogenesis related 2","termid":"PBO:0048691"}


id: MONDO:0043071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"aniridia","termid":"MONDO:0019172"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Zazam Sheriff Phillips syndrome","secondary_identifiers":["UMLS:C2931300","MESH:C536723","MEDGEN:419768"],"synonyms":[{"name":"aniridia, ectopia lentis, abnormal upper incisors and intellectual disability","type":"related"},{"name":"aniridia, ectopia lentis, abnormal upper incisors and mental retardation","type":"related"},{"name":"aniridia, lens luxation, intellectual disability","type":"related"},{"name":"aniridia, lens luxation, mental retardation","type":"related"}],"termid":"MONDO:0043071","xrefs":{"Monarch":{"xref_id":"0043071"}}}


id: PBO:0000959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fun thirty related protein Fft1 (predicted)","termid":"PBO:0000959"}


id: PBO:0044089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 45 member A9","termid":"PBO:0044089"}


id: FYPO:0002860
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of polynucleotide uridylyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah","PMID:17449726"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal poly(U) polymerase activity","synonyms":[{"name":"abnormal RNA uridylyltransferase activity","type":"exact"},{"name":"abnormal polynucleotide uridylyltransferase activity","type":"exact"}],"termid":"FYPO:0002860"}


id: PBO:0000072
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S. pombe specific DUF999 family protein 1","termid":"PBO:0000072"}


id: GO:0071980
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell gliding that results from the actions of cell surface adhesin proteins that are propelled by membrane motor proteins.","definition_xrefs":["PMID:18461074"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell gliding","termid":"GO:0071976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell surface adhesin-mediated gliding motility","termid":"GO:0071980"}


id: PBO:0062968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"poly(A) binding protein cytoplasmic 1 pseudogene 11","termid":"PBO:0062968"}


id: PBO:0081833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger family member 767, pseudogene","termid":"PBO:0081833"}


id: PBO:0029897
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA_recombination_during_vegetative_growth","termid":"PBO:0029897"}


id: GO:0015685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which ferric-enterobactin, the iron-bound form of the siderophore enterobactin, is transported into the cell by specific cell surface receptors.","definition_xrefs":["PMID:23192658","GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transport","termid":"GO:0015711"},{"relation_name":"is_a","term_name":"siderophore-iron import into cell","termid":"GO:0033214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0098771"],"is_obsolete":false,"name":"ferric-enterobactin import into cell","synonyms":[{"name":"ferric-enterobactin transport","type":"broad"}],"termid":"GO:0015685"}


id: GO:0052217
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The movement of a motile cell or organism in response to environmental oxygen on, within or near a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete aerotaxis in environment of other organism involved in symbiotic interaction (obsolete GO:0052217)","synonyms":[{"name":"aerotaxis in environment of other organism during symbiotic interaction","type":"related"},{"name":"aerotaxis in response to environment of other organism","type":"exact"}],"termid":"GO:0052217"}


id: PBO:0038278
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eco_evidence","termid":"PBO:0038278"}


id: SO:0000497
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"9 nucleotide recombination site (e.g. GGTTTTTGT), part of a five_prime_D-recombination signal sequence (SO:0000556) of an immunoglobulin/T-cell receptor gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"nonamer_of_recombination_feature_of_vertebrate_immune_system_gene","termid":"SO:0000562"},{"relation_name":"part_of","term_name":"five_prime_D_recombination_signal_sequence","termid":"SO:0000556"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_D_nonamer","synonyms":[{"name":"5'D-NONAMER","type":"exact"},{"name":"five prime D nonamer","type":"exact"}],"termid":"SO:0000497"}


id: GO:1901778
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving pentalenolactone.","definition_xrefs":["GOC:TermGenie","PMID:17178094","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"},{"relation_name":"is_a","term_name":"monocarboxylic acid metabolic process","termid":"GO:0032787"},{"relation_name":"is_a","term_name":"epoxide metabolic process","termid":"GO:0097176"},{"relation_name":"is_a","term_name":"lactone metabolic process","termid":"GO:1901334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentalenolactone metabolic process","synonyms":[{"name":"pentalenolactone metabolism","type":"exact"}],"termid":"GO:1901778"}


id: PBO:0083615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dynein intermediate chain, microtubule motor protein; required for intracellular transport and cell division; acts in cytoplasmic dynein pathway; forms complex with dynein light chain Dyn2p that promotes Dyn1p homodimerization and potentiates motor processivity; Dyn2p-Pac11p complex is also important for interaction of dynein motor complex with dynactin complex; forms cortical cytoplasmic microtubule capture site with Num1p; essential in the absence of CIN8","termid":"PBO:0083615"}


id: MONDO:0018014
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Transient neonatal multiple acyl-CoA dehydrogenase deficiency describes a very rare condition where a maternal riboflavin deficiency causes an infant to present with manifestations similar to those seen in multiple acyl-CoA dehydrogenase (MAD) deficiency such as poor suck, metabolic acidosis and hypoglycemia, but that resolves completely with oral riboflavin. In the one patient described haploinsufficiency of the human riboflavin transporter (hRFT1) was described in the mother.","definition_xrefs":["Orphanet:329942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase deficiency","termid":"MONDO:0017714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"transient neonatal multiple acyl-CoA dehydrogenase deficiency","secondary_identifiers":["UMLS:C4509950","MEDGEN:1373921","SCTID:723552005","GARD:21498"],"synonyms":[{"name":"transient neonatal MAD deficiency","type":"exact"},{"name":"transient neonatal MADD","type":"exact"},{"name":"transient neonatal glutaric acidemia type 2","type":"exact"},{"name":"transient neonatal glutaric aciduria type 2","type":"exact"}],"termid":"MONDO:0018014","xrefs":{"Monarch":{"xref_id":"0018014"}}}


id: PBO:0034426
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_division_of","termid":"PBO:0034426"}


id: PBO:0059225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maestro heat like repeat family member 7","termid":"PBO:0059225"}


id: SO:1000162
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intrachromosomal transposition whereby the segment between the first two breaks listed is removed and inserted at the third break; the orientation of the insertion with respect to its flanking segments is not recorded.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrachromosomal_transposition","termid":"SO:1000041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unoriented_intrachromosomal_transposition","synonyms":[{"name":"(Drosophila)uTp","type":"related"},{"name":"unorientated intrachromosomal transposition","type":"exact"}],"termid":"SO:1000162"}


id: PBO:0062190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily Q member 2 (gene/pseudogene)","termid":"PBO:0062190"}


id: GO:0045820
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75038,78092],"is_not":false,"summary":null,"term":"GO:0045820"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of glycolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glycolytic process","termid":"GO:0006110"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide catabolic process","termid":"GO:0033122"},{"relation_name":"is_a","term_name":"negative regulation of carbohydrate metabolic process","termid":"GO:0045912"},{"relation_name":"is_a","term_name":"negative regulation of ATP metabolic process","termid":"GO:1903579"},{"relation_name":"negatively_regulates","term_name":"glycolytic process","termid":"GO:0006096"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0005975","GO:0006091","GO:0008150"],"is_obsolete":false,"name":"negative regulation of glycolytic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"down regulation of glycolysis","type":"exact"},{"name":"down-regulation of glycolysis","type":"exact"},{"name":"downregulation of glycolysis","type":"exact"},{"name":"inhibition of glycolysis","type":"narrow"}],"termid":"GO:0045820","terms_by_termid":{"GO:0045820":null}}


id: GO:0097178
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ruffle, a projection at the leading edge of a crawling cell; the protrusions are supported by a microfilament meshwork. The formation of ruffles (also called membrane ruffling) is thought to be controlled by a group of enzymes known as Rho GTPases, specifically RhoA, Rac1 and cdc42.","definition_xrefs":["GOC:yaf","PMID:12556481","Wikipedia:Membrane_ruffling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ruffle organization","termid":"GO:0031529"},{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection assembly","termid":"GO:0120031"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ruffle assembly","synonyms":[{"name":"membrane ruffle formation","type":"exact"},{"name":"membrane ruffling","type":"exact"}],"termid":"GO:0097178"}


id: GO:0044787
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The DNA-dependent DNA replication, exemplified by prokaryotes, that occurs as part of the cell cycle. Prokaryotic DNA replication is bi-directional and originates at a single origin of replication on the circular genome.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle DNA replication","termid":"GO:0044786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"bacterial-type DNA replication","synonyms":[{"name":"bacterial-type cell cycle DNA replication","type":"exact"}],"termid":"GO:0044787"}


id: GO:0035456
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interferon-beta stimulus. Interferon-beta is a type I interferon.","definition_xrefs":["PMID:9561374","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cytokine","termid":"GO:0034097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to interferon-beta","synonyms":[{"name":"response to beta-1 interferon","type":"related"},{"name":"response to fiblaferon","type":"exact"},{"name":"response to fibroblast interferon","type":"exact"},{"name":"response to interferon beta","type":"exact"}],"termid":"GO:0035456"}


id: PBO:0091934
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase P cleavage specificity not affected by sequences flanking the G+1 cleavage site","termid":"PBO:0091934"}


id: MOD:00784
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-phenylalanine residue to N-acetyl-L-phenylalanine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-phenylalanine residue","termid":"MOD:00914"},{"relation_name":"is_a","term_name":"alpha-amino acetylated residue","termid":"MOD:01458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00408"}],"interesting_parent_ids":["MOD:00408"],"is_obsolete":false,"name":"N-acetyl-L-phenylalanine","synonyms":[{"name":"AcPhe","type":"exact"}],"termid":"MOD:00784"}


id: MONDO:0024466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated hereditary congenital facial paralysis","termid":"MONDO:0011090"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"facial paresis, hereditary congenital, 1","secondary_identifiers":["UMLS:C1832284","MEDGEN:371292","OMIM:601471"],"synonyms":[{"name":"HCFP1","type":"exact"},{"name":"Mobius syndrome 2","type":"related"},{"name":"Mobius syndrome 2, formerly","type":"related"},{"name":"Moebius syndrome 2","type":"related"},{"name":"Moebius syndrome 2, formerly","type":"related"},{"name":"facial palsy, congenital, unilateral or bilateral","type":"related"},{"name":"facial paresis, hereditary congenital, 1","type":"exact"}],"termid":"MONDO:0024466","xrefs":{"Monarch":{"xref_id":"0024466"}}}


id: MONDO:0003343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioblastoma that arises from the retina. It is typically a sign of von Hippel-Lindau disease. It may also be seen as an isolated entity without systemic involvement.","definition_xrefs":["NCIT:C39783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal vascular disorder","termid":"MONDO:0002311"},{"relation_name":"is_a","term_name":"hemangioblastoma","termid":"MONDO:0016748"},{"relation_name":"is_a","term_name":"hemangioma of retina","termid":"MONDO:0021541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"retinal hemangioblastoma","secondary_identifiers":["MEDGEN:152677","UMLS:C0730303","DOID:5240"],"synonyms":[{"name":"hemangioblastoma of vasculature of retina","type":"exact"},{"name":"retinal capillary hemangioblastoma","type":"exact"},{"name":"retinal hemangioblastoma","type":"exact"},{"name":"vasculature of retina hemangioblastoma","type":"exact"}],"termid":"MONDO:0003343","xrefs":{"Monarch":{"xref_id":"0003343"}}}


id: PBO:0049990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine triad nucleotide binding protein 2 pseudogene 1","termid":"PBO:0049990"}


id: PBO:0061946
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily X member 1 pseudogene","termid":"PBO:0061946"}


id: FYPO:0002503
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the palmitoylation of one or more specific proteins is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein modification","termid":"FYPO:0002494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0005447","FYPO:0001985","FYPO:0002274"],"is_obsolete":false,"name":"abnormal protein palmitoylation","termid":"FYPO:0002503"}


id: MONDO:0958269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated left bronchial isomerism","secondary_identifiers":["MEDGEN:1853146","UMLS:C5816741","Orphanet:649029"],"termid":"MONDO:0958269","xrefs":{"Monarch":{"xref_id":"0958269"}}}


id: PBO:0114349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane amino acid transmembrane transporter Meu22","termid":"PBO:0114349"}


id: MONDO:0008922
data:
  {"annotated_genes":["SJAG_00404"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87665],"is_not":false,"summary":null,"term":"MONDO:0008922"}]},"cv_name":"mondo","definition":"Congenital cataract - hypertrophic cardiomyopathy - mitochrondrial myopathy (CCM) is a mitochondrial disease characterized by cataracts, hypertrophic cardiomyopathy, muscle weakness and lactic acidosis after exercise.","definition_xrefs":["Orphanet:1369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial substrate carrier disorder","termid":"MONDO:0016801"},{"relation_name":"is_a","term_name":"disorder of phospholipids, sphingolipids and fatty acids biosynthesis","termid":"MONDO:0018117"},{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome","termid":"MONDO:0018158"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00404":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0002525","MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Sengers syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:1142","MESH:C538280","MEDGEN:395228","DOID:0080132","OMIM:212350","SCTID:717812000","UMLS:C1859317"],"synonyms":[{"name":"Sengers syndrome","type":"exact"},{"name":"cardiomyopathic mitochondrial DNA depletion syndrome 10","type":"related"},{"name":"cardiomyopathy and cataract","type":"related"},{"name":"cataract and cardiomyopathy","type":"related"},{"name":"congenital cataract-hypertrophic cardiomyopathy-mitochondrial myopathy syndrome","type":"related"},{"name":"mitochondrial DNA depletion syndrome 10","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 10 (Cardiomyopathic type)","type":"related"}],"termid":"MONDO:0008922","terms_by_termid":{"MONDO:0008922":null},"xrefs":{"Monarch":{"xref_id":"0008922"}}}


id: PBO:0026939
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-delayed_onset_of_meiosis_I","termid":"PBO:0026939"}


id: SO:0001707
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 9th residue (a lysine), from the start of the H3 histone protein is tri-methylated.","direct_ancestors":[{"relation_name":"is_a","term_name":"H3K9_methylation_site","termid":"SO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H3K9_trimethylation_site","synonyms":[{"name":"H3K9 tri-methylation site","type":"exact"},{"name":"H3K9Me3","type":"related"}],"termid":"SO:0001707"}


id: MONDO:0018216
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Koolen-de Vries syndrome","termid":"MONDO:0012496"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 17","termid":"MONDO:0016915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Koolen-de Vries syndrome due to 17q21.31 microdeletion syndrome","secondary_identifiers":["DOID:0050880","DECIPHER:57","GARD:17576","Orphanet:363958","SCTID:717338006","DOID:0070076","MESH:C566476"],"synonyms":[{"name":"17q21.31 recurrent microdeletion syndrome","type":"exact"},{"name":"Del(17)(q21.31)","type":"exact"},{"name":"monosomy 17q21.31","type":"exact"}],"termid":"MONDO:0018216","xrefs":{"Monarch":{"xref_id":"0018216"}}}


id: PBO:0071674
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L37 pseudogene 6","termid":"PBO:0071674"}


id: PBO:0046418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EPH receptor A3","termid":"PBO:0046418"}


id: PBO:0004259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MutL family protein Mlh1 (predicted)","termid":"PBO:0004259"}


id: PBO:0055422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2852","termid":"PBO:0055422"}


id: GO:0061853
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neuroblast migration.","definition_xrefs":["PMID:23149556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell migration","termid":"GO:0030334"},{"relation_name":"regulates","term_name":"neuroblast migration","termid":"GO:0097402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuroblast migration","termid":"GO:0061853"}


id: FYPO:0001708
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of iron-sulfur cluster binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal molecular function","termid":"FYPO:0000706"},{"relation_name":"is_a","term_name":"binding phenotype","termid":"FYPO:0001092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal iron-sulfur cluster binding","synonyms":[{"name":"normal iron-sulphur cluster binding","type":"exact"}],"termid":"FYPO:0001708"}


id: SO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A heritable locus on a chromosome that is prone to DNA breakage.","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_breakpoint","termid":"SO:0001021"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile_site","termid":"SO:0002349"}


id: PBO:0039293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG9 alpha-1,2-mannosyltransferase","termid":"PBO:0039293"}


id: FYPO:0001390
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A septation phenotype observed in the vegetative growth phase of the life cycle in which a cell forms a septum that is not perpendicular to the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal septum during vegetative growth","termid":"FYPO:0002455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"misoriented septum during vegetative growth","synonyms":[{"name":"abnormal septum orientation during vegetative growth","type":"exact"},{"name":"misoriented septum during mitotic cell cycle","type":"related"},{"name":"tilted septum during vegetative growth","type":"exact"}],"termid":"FYPO:0001390"}


id: MONDO:0958242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 90","secondary_identifiers":["DOID:0070589","MEDGEN:1853928","OMIM:620744","UMLS:C5935587"],"termid":"MONDO:0958242","xrefs":{"Monarch":{"xref_id":"0958242"}}}


id: MONDO:0005310
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by an electrocardiographic finding of an organized, regular atrial rhythm with atrial rate of 240-340 beats per minute. Multiple P waves typically appear in the inferior leads in a saw tooth-like pattern between the QRS complexes. (CDISC)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial tachycardia","termid":"MONDO:0005479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"atrial flutter","secondary_identifiers":["NCIT:C51224","UMLS:C0004239","HP:0004749","MESH:D001282","NANDO:2200218","EFO:0003911","MEDGEN:13955","NANDO:2200225","NANDO:2100050","ICD9:427.32","SCTID:5370000"],"synonyms":[{"name":"atrial flutter","type":"exact"},{"name":"atrial flutter (disease)","type":"exact"}],"termid":"MONDO:0005310","xrefs":{"Monarch":{"xref_id":"0005310"}}}


id: GO:0097538
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex located on the cilium membrane in the ciliary transition zone; it is connected to the cilium axoneme via Y-shaped links.","definition_xrefs":["GOC:cilia","PMID:22653444","PMID:4554367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"part_of","term_name":"ciliary transition zone","termid":"GO:0035869"},{"relation_name":"part_of","term_name":"ciliary membrane","termid":"GO:0060170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"ciliary necklace","synonyms":[{"name":"cilial necklace","type":"exact"},{"name":"cilium necklace","type":"exact"}],"termid":"GO:0097538"}


id: GO:0002076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an osteoblast over time, from its formation to the mature structure. Osteoblast development does not include the steps involved in committing a cranial neural crest cell or an osteoprogenitor cell to an osteoblast fate. An osteoblast is a cell that gives rise to bone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"osteoblast differentiation","termid":"GO:0001649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"osteoblast development","termid":"GO:0002076"}


id: PBO:0027606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_copper_ion","termid":"PBO:0027606"}


id: MONDO:0017577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spontaneous periodic hypothermia (SPH) is a neurological disorder characterized by spontaneous periodic hypothermia and hyperhidrosis in the absence of hypothalamic lesions.","definition_xrefs":["Orphanet:29822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spontaneous periodic hypothermia","secondary_identifiers":["GARD:4815","UMLS:C2931542","MEDGEN:419438","MESH:C537594"],"synonyms":[{"name":"Shapiro syndrome","type":"exact"},{"name":"Shapiro's syndrome","type":"related"},{"name":"episodic spontaneous hypothermia","type":"exact"},{"name":"recurrent spontaneous hypothermia with hypoplasia of the corpus callosum","type":"related"},{"name":"spontaneous periodic hypothermia syndrome","type":"related"},{"name":"spontaneous recurrent hypothermia syndrome","type":"related"}],"termid":"MONDO:0017577","xrefs":{"Monarch":{"xref_id":"0017577"}}}


id: PBO:0058117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4420","termid":"PBO:0058117"}


id: SO:0002055
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A variant whereby the gene product is not functional or the gene product is not produced.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"functionally_abnormal","termid":"SO:0002218"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"null_mutation","synonyms":[{"name":"null mutation","type":"exact"}],"termid":"SO:0002055"}


id: GO:0047363
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-glucosyl-1,6-alpha-D-glucosyl-1,6-alpha-D-glucosyl-1,3-1-O-alkyl-2-O-acylglycerol + 3'-phosphoadenosine 5'-phosphosulfate = 6-sulfo-alpha-D-glucosyl-1,6-alpha-D-glucosyl-1,6-alpha-D-glucosyl-1,3-1-O-alkyl-2-O-acylglycerol + adenosine 3',5'-bisphosphate.","definition_xrefs":["EC:2.8.2.19","MetaCyc:2.8.2.19-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"triglucosylalkylacylglycerol sulfotransferase activity","secondary_identifiers":["RHEA:13273"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:triglucosyl-1-O-alkyl-2-O-acylglycerol 6-sulfotransferase activity","type":"related"},{"name":"triglucosylalkylacylglycerol sulphotransferase activity","type":"exact"},{"name":"triglucosylmonoalkylmonoacyl sulfotransferase activity","type":"related"}],"termid":"GO:0047363"}


id: GO:1902494
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id: GO:1901616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organic hydroxy compound.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete organic hydroxy compound catabolic process (obsolete GO:1901616)","synonyms":[{"name":"organic hydroxy compound breakdown","type":"exact"},{"name":"organic hydroxy compound catabolism","type":"exact"},{"name":"organic hydroxy compound degradation","type":"exact"}],"termid":"GO:1901616"}


id: MONDO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the middle ear","direct_ancestors":[{"relation_name":"is_a","term_name":"malignant ear neoplasm","termid":"MONDO:0003277"},{"relation_name":"is_a","term_name":"auditory system cancer","termid":"MONDO:0004532"},{"relation_name":"is_a","term_name":"neoplasm of middle ear","termid":"MONDO:0021366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"middle ear cancer","secondary_identifiers":["SCTID:363359008","NCIT:C4765","UMLS:C0496788","MEDGEN:99218","ICD10CM:C30.1","DOID:5099"],"synonyms":[{"name":"cancer of middle ear","type":"exact"},{"name":"malignant middle Ear tumor","type":"exact"},{"name":"malignant middle Ear tumour","type":"exact"},{"name":"malignant middle ear neoplasm","type":"exact"},{"name":"malignant neoplasm of middle ear","type":"exact"},{"name":"malignant neoplasm of the middle Ear","type":"exact"},{"name":"malignant tumor of middle Ear","type":"exact"},{"name":"malignant tumor of the middle Ear","type":"exact"},{"name":"malignant tumour of middle Ear","type":"exact"},{"name":"malignant tumour of the middle Ear","type":"exact"},{"name":"middle ear cancer","type":"exact"},{"name":"tumor of the middle ear","type":"broad"},{"name":"tumour of the middle ear","type":"broad"}],"termid":"MONDO:0003275","xrefs":{"Monarch":{"xref_id":"0003275"}}}


id: MONDO:1011902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropathy and feather color dilution, non-human animal","secondary_identifiers":["OMIA:002398"],"termid":"MONDO:1011902","xrefs":{"Monarch":{"xref_id":"1011902"}}}


id: PBO:0082042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2Fe-2S mitochondrial protein involved in redox quality control; may maintain protein redox status by targeting oxidation sensitive cysteine residues; bishistidinyl coordinated, non-Rieske [2Fe-2S] cluster containing thiredoxin-like ferredoxin; forms a functional complex with Osm1p and Erv1p in the IMS; required for assembly of numerous mitochondrial import complexes; essential for anaerobiosis; localizes to the mitochondrial matrix and intermembrane space (IMS); homologous to APD1","termid":"PBO:0082042"}


id: PBO:0016918
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"does not functionally complement A. nidulans nimA","termid":"PBO:0016918"}


id: PBO:0076017
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine kinase 11","termid":"PBO:0076017"}


id: PBO:0056018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LSM14A mRNA processing body assembly factor","termid":"PBO:0056018"}


id: PR:Q9UT02
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sec71 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UT02"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sec71 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4D7.01c","synonyms":[{"name":"Spom972h-sec71","type":"exact"}],"termid":"PR:Q9UT02"}


id: PBO:0042362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD151 molecule (Raph blood group)","termid":"PBO:0042362"}


id: PBO:0071400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 6","termid":"PBO:0071400"}


id: PBO:0051940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integral membrane protein 2B","termid":"PBO:0051940"}


id: PBO:0036506
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana COQ5","termid":"PBO:0036506"}


id: PBO:0086682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; identified by homology","termid":"PBO:0086682"}


id: MONDO:0030991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bile acid conjugation defect 1","secondary_identifiers":["MEDGEN:1780260","OMIM:619232","UMLS:C5543203"],"synonyms":[{"name":"BACD1","type":"exact"}],"termid":"MONDO:0030991","xrefs":{"Monarch":{"xref_id":"0030991"}}}


id: FYPO:0002072
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which a prospore has a nucleus in an abnormal location. The normal location is at the midpoint of the long axis of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mislocalized nucleus","termid":"FYPO:0002069"},{"relation_name":"output_of","term_name":"abnormal nucleus positioning in prospore","termid":"FYPO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"mislocalized nucleus in prospore","synonyms":[{"name":"abnormal nucleus location in prospore","type":"exact"},{"name":"abnormal nucleus position in prospore","type":"exact"},{"name":"displaced nucleus in prospore","type":"exact"},{"name":"displaced nucleus prospore","type":"exact"},{"name":"mislocalised nucleus in prospore","type":"exact"},{"name":"mislocalized nucleus in forespore","type":"exact"},{"name":"mislocalized prospore nucleus","type":"exact"},{"name":"misplaced prospore nuclei","type":"exact"},{"name":"misplaced prospore nucleus","type":"exact"},{"name":"nuclear displacement in prospore","type":"exact"}],"termid":"FYPO:0002072"}


id: GO:0003696
data:
  {"annotated_genes":["SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98079],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035939"}]},"cv_name":"molecular_function","definition":"Binding to satellite DNA, the many tandem repeats (identical or related) of a short basic repeating unit; many have a base composition or other property different from the genome average that allows them to be separated from the bulk (main band) genomic DNA.","definition_xrefs":["SO:0000005","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific double-stranded DNA binding","termid":"GO:1990837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003674","GO:0003677","GO:0005488"],"is_obsolete":false,"name":"satellite DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0003696","terms_by_termid":{"GO:0035939":null}}


id: PATO:0000792
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000792 repair function value (obsolete PATO:0000792)","termid":"PATO:0000792"}


id: PBO:0044604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDB1 and CUL4 associated factor 10","termid":"PBO:0044604"}


id: PBO:0073429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3a, subunit 3 pseudogene 1","termid":"PBO:0073429"}


id: MONDO:0008295
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of porphyria cutanea tarda that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"porphyria cutanea tarda","termid":"MONDO:0015104"},{"relation_name":"is_a","term_name":"acquired porphyria","termid":"MONDO:1030015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005066","MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"sporadic porphyria cutanea tarda","secondary_identifiers":["GARD:17749","Orphanet:443057","SCTID:402479002","MESH:C566768","UMLS:C1867968","MEDGEN:357391","icd11.foundation:1813031784","OMIM:176090"],"synonyms":[{"name":"PCT, 'sporadic' type","type":"related"},{"name":"PCT, type 1","type":"related"},{"name":"acquired porphyria cutanea tarda","type":"exact"},{"name":"porphyria cutanea tarda type I","type":"exact"},{"name":"porphyria cutanea tarda, type 1","type":"related"},{"name":"porphyria cutanea tarda, type I","type":"related"}],"termid":"MONDO:0008295","xrefs":{"Monarch":{"xref_id":"0008295"}}}


id: PBO:0064272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology and RhoGEF domain containing G5","termid":"PBO:0064272"}


id: GO:1900377
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of secondary metabolite biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"negatively_regulates","term_name":"secondary metabolite biosynthetic process","termid":"GO:0044550"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"negative regulation of secondary metabolite biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"down regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"down-regulation of secondary metabolite biosynthesis","type":"exact"},{"name":"down-regulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"downregulation of secondary metabolite biosynthesis","type":"exact"},{"name":"downregulation of secondary metabolite biosynthetic process","type":"exact"},{"name":"inhibition of secondary metabolite biosynthesis","type":"exact"},{"name":"inhibition of secondary metabolite biosynthetic process","type":"narrow"},{"name":"negative regulation of secondary metabolite biosynthesis","type":"exact"}],"termid":"GO:1900377","terms_by_termid":{"GO:1905569":null}}


id: PBO:0056436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 9","termid":"PBO:0056436"}


id: PBO:0088507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribulose phosphate 3-epimerase Rpe1","termid":"PBO:0088507"}


id: PR:Q7Z9I2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An uncharacterized oxidoreductase YciK that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized oxidoreductase C663.09c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC663.09c","secondary_identifiers":["UniProtKB:Q7Z9I2"],"synonyms":[{"name":"Spom972h-yciK","type":"exact"}],"termid":"PR:Q7Z9I2"}


id: GO:1901906
data:
  {"annotated_genes":["SJAG_04870"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901907"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving diadenosine pentaphosphate.","definition_xrefs":["GOC:TermGenie","PMID:10090752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diadenosine polyphosphate metabolic process","termid":"GO:0015959"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04870":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"diadenosine pentaphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"diadenosine pentaphosphate metabolism","type":"exact"},{"name":"diadenosyl pentaphosphate metabolic process","type":"exact"},{"name":"diadenosyl pentaphosphate metabolism","type":"exact"}],"termid":"GO:1901906","terms_by_termid":{"GO:1901907":null}}


id: PBO:0089246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane ThrE amino acid transmembrane transporter family protein","termid":"PBO:0089246"}


id: MONDO:0007801
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypoplasia of teeth roots (obsolete MONDO:0007801)","secondary_identifiers":["MESH:C564144","OMIM:146400"],"synonyms":[{"name":"hypoplasia of teeth roots","type":"related"}],"termid":"MONDO:0007801","xrefs":{"Monarch":{"xref_id":"0007801"}}}


id: PBO:0011102
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Seckel syndrome","termid":"PBO:0011102"}


id: PBO:0005603
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.2.1.1","termid":"PBO:0005603"}


id: PBO:0053024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine aminopeptidase 3","termid":"PBO:0053024"}


id: PBO:0049293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase alpha 12, pseudogene","termid":"PBO:0049293"}


id: PBO:0057614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1180","termid":"PBO:0057614"}


id: GO:1903560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 3-cyano-L-alanine.","definition_xrefs":["GO_REF:0000068","PMID:24100226","GOC:kmv","GOC:TermGenie","PMID:24843024"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrile biosynthetic process","termid":"GO:0080028"},{"relation_name":"is_a","term_name":"L-amino acid biosynthetic process","termid":"GO:0170034"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"3-cyano-L-alanine metabolic process","termid":"GO:1903558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"3-cyano-L-alanine biosynthetic process","synonyms":[{"name":"3-cyano-L-alanine anabolism","type":"exact"},{"name":"3-cyano-L-alanine biosynthesis","type":"exact"},{"name":"3-cyano-L-alanine formation","type":"exact"},{"name":"3-cyano-L-alanine synthesis","type":"exact"}],"termid":"GO:1903560"}


id: PBO:0034477
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_mitotic_spindle_microtubule_depolymerization_during_anaphase_A","termid":"PBO:0034477"}


id: MONDO:0017173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Non-syndromic male infertility due to sperm motility disorder is a rare, genetic, non-syndromic male infertility disorder characterized by infertility due to sperm with defects in their cilia/flagella structure, leading to absent motility or reduced forward motility in fresh ejaculate. Reduced semen volume, oligospermia and an increased number of abnormally structured spermatozoa is often present.","definition_xrefs":["Orphanet:276234"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic male infertility due to sperm motility disorder (obsolete MONDO:0017173)","synonyms":[{"name":"isolated male infertility due to sperm motility disorder","type":"exact"},{"name":"non-syndromic male infertility due asthenozoospermia","type":"exact"},{"name":"nonsyndromic male infertility due to sperm motility disorder","type":"exact"}],"termid":"MONDO:0017173","xrefs":{"Monarch":{"xref_id":"0017173"}}}


id: GO:2000404
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of T cell migration.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lymphocyte migration","termid":"GO:2000401"},{"relation_name":"regulates","term_name":"T cell migration","termid":"GO:0072678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell migration","synonyms":[{"name":"regulation of T lymphocyte migration","type":"exact"},{"name":"regulation of T-cell migration","type":"exact"},{"name":"regulation of T-lymphocyte migration","type":"exact"}],"termid":"GO:2000404"}


id: GO:0001065
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: nucleoside triphosphate + RNA(n) = diphosphate + RNA(n+1). Utilizes a DNA template that contains a single-subunit-type mitochondrial RNA polymerase-specific promoter to direct initiation and catalyses DNA-template-directed extension of the 3'-end of an RNA strand by one nucleotide at a time. Can initiate a chain 'de novo'.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial single subunit type RNA polymerase activity (obsolete GO:0001065)","termid":"GO:0001065"}


id: PBO:0072377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 3","termid":"PBO:0072377"}


id: MONDO:0018606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"optic nerve disorder","termid":"MONDO:0002135"},{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"extensive peripapillary myelinated nerve fibers","secondary_identifiers":["GARD:21842","Orphanet:440724","MEDGEN:1842279","UMLS:C5681187"],"termid":"MONDO:0018606","xrefs":{"Monarch":{"xref_id":"0018606"}}}


id: PBO:0039728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apolipoprotein B receptor","termid":"PBO:0039728"}


id: MONDO:0016975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thymic epithelial neoplasm characterized by the presence of a lymphocyte-poor component similar to that seen in type A thymoma and a lymphocyte-rich component which contains neoplastic small polygonal epithelial cells. It may be associated with myasthenia gravis and pure red cell aplasia. The majority of cases occur in the anterior mediastinum as Masaoka stage I tumors. A minority of the cases occur as stage II or stage III tumors. The overall survival is reported to be 80-100% at 5 and 10 years.","definition_xrefs":["NCIT:C6885"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thymoma","termid":"MONDO:0006456"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"thymoma type AB","secondary_identifiers":["ICDO:8582/1","EFO:1000582","UMLS:C1266092","ICD10CM:D15.0","MEDGEN:220414","DOID:3280","Orphanet:263324","GARD:20894"],"synonyms":[{"name":"mixed type thymoma","type":"exact"},{"name":"primary thymic epithelial neoplasm type AB","type":"exact"},{"name":"primary thymic epithelial tumor type AB","type":"exact"},{"name":"primary thymic epithelial tumour type AB","type":"exact"},{"name":"thymoma type AB","type":"exact"},{"name":"thymoma, mixed type","type":"exact"}],"termid":"MONDO:0016975","xrefs":{"Monarch":{"xref_id":"0016975"}}}


id: GO:0030338
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CMP-N-acetyl-beta-neuraminate + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = CMP-N-glycoloyl-beta-neuraminate + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["EC:1.14.18.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"CMP-N-acetylneuraminate monooxygenase activity","secondary_identifiers":["RHEA:16145","MetaCyc:1.14.18.2-RXN"],"synonyms":[{"name":"CMP-N-acetylneuraminate hydroxylase activity","type":"related"},{"name":"CMP-N-acetylneuraminic acid hydroxylase activity","type":"exact"},{"name":"CMP-Neu5Ac hydroxylase activity","type":"related"},{"name":"cytidine monophosphoacetylneuraminate monooxygenase activity","type":"related"}],"termid":"GO:0030338"}


id: GO:0034322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: decanoyl-CoA + an alcohol = CoA + a decyl ester.","definition_xrefs":["PMID:16361250","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete alcohol O-decanoyltransferase activity (obsolete GO:0034322)","termid":"GO:0034322"}


id: GO:0034438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of a lipoprotein by oxidation of one or more amino acids in the protein.","definition_xrefs":["GOC:BHF","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete lipoprotein amino acid oxidation (obsolete GO:0034438)","termid":"GO:0034438"}


id: GO:0052579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (1R,4S)-menthone + NADP+ = (R)-pulegone + H+ + NADPH. Also converts (2R,5R)-isomenthone into (R)-pulegone.","definition_xrefs":["EC:1.3.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"(+)-pulegone reductase (NADP+) activity","synonyms":[{"name":"(+)-isomenthone:NADP+ oxidoreductase activity","type":"related"}],"termid":"GO:0052579"}


id: PBO:0059750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 24","termid":"PBO:0059750"}


id: MONDO:0006111
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-papillary neoplasm of the urinary bladder, whose classification categories include low-grade intraurothelial neoplasia and urothelial carcinoma in situ.","definition_xrefs":["NCIT:C37266"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder neoplasm","termid":"MONDO:0004987"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bladder flat intraepithelial lesion","secondary_identifiers":["DOID:5429","UMLS:C1332559","EFO:1000126","MEDGEN:231947"],"synonyms":[{"name":"bladder flat intraepithelial lesion","type":"exact"},{"name":"flat intraepithelial lesion of the bladder","type":"exact"},{"name":"flat intraepithelial lesion of the urinary bladder","type":"exact"},{"name":"urinary bladder flat intraepithelial lesion","type":"exact"}],"termid":"MONDO:0006111","xrefs":{"Monarch":{"xref_id":"0006111"}}}


id: GO:0046784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of intronless viral mRNA from the host nucleus to the cytoplasm for translation.","definition_xrefs":["PMID:11598019"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral gene expression","termid":"GO:0019080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral mRNA export from host cell nucleus","synonyms":[{"name":"intronless viral mRNA export from host cell nucleus","type":"exact"},{"name":"intronless viral mRNA export from host nucleus","type":"related"},{"name":"intronless viral mRNA export out of nucleus","type":"exact"},{"name":"intronless viral mRNA transport from nucleus to cytoplasm","type":"exact"},{"name":"intronless viral mRNA-nucleus export","type":"exact"}],"termid":"GO:0046784"}


id: GO:0004641
data:
  {"annotated_genes":["SJAG_03140"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72716],"is_not":false,"summary":null,"term":"GO:0004641"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-(formamido)-N(1)-(5-phospho-D-ribosyl)acetamidine + ATP = 5-amino-1-(5-phospho-D-ribosyl)imidazole + ADP + 2 H+ + phosphate.","definition_xrefs":["EC:6.3.3.1","RHEA:23032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclo-ligase activity","termid":"GO:0016882"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"phosphoribosylformylglycinamidine cyclo-ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["KEGG_REACTION:R04208","Reactome:R-HSA-73810","MetaCyc:AIRS-RXN"],"synonyms":[{"name":"2-(formamido)-1-N-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"2-(formamido)-N1-(5-phosphoribosyl)acetamidine cyclo-ligase (ADP-forming)","type":"related"},{"name":"5'-aminoimidazole ribonucleotide synthetase activity","type":"related"},{"name":"AIR synthase activity","type":"related"},{"name":"AIR synthetase activity","type":"related"},{"name":"AIRS activity","type":"related"},{"name":"phosphoribosyl-aminoimidazole synthetase activity","type":"related"},{"name":"phosphoribosylaminoimidazole synthetase activity","type":"related"}],"termid":"GO:0004641","terms_by_termid":{"GO:0004641":null}}


id: GO:1903206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of hydrogen peroxide-induced cell death.","definition_xrefs":["PMID:14749723","PMID:24252804","GOC:PARL","GOC:bf","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of hydrogen peroxide-induced cell death (obsolete GO:1903206)","synonyms":[{"name":"down regulation of cell death in response to H2O2","type":"exact"},{"name":"down regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"down regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"down-regulation of cell death in response to H2O2","type":"exact"},{"name":"down-regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"downregulation of cell death in response to H2O2","type":"exact"},{"name":"downregulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"inhibition of cell death in response to H2O2","type":"narrow"},{"name":"inhibition of cell death in response to hydrogen peroxide","type":"narrow"},{"name":"inhibition of hydrogen peroxide-mediated cell death","type":"related"},{"name":"negative regulation of cell death in response to H2O2","type":"exact"},{"name":"negative regulation of cell death in response to hydrogen peroxide","type":"exact"},{"name":"negative regulation of hydrogen peroxide-mediated cell death","type":"related"},{"name":"protection against H2O2-induced cell death","type":"related"},{"name":"protection against hydrogen peroxide-induced cell death","type":"related"}],"termid":"GO:1903206"}


id: GO:1901206
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of a cardiac adrenergic receptor signaling pathway.","definition_xrefs":["GOC:rl","GOC:TermGenie","GOC:BHF","GOC:mtg_cardiac_conduct_nov11"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of adrenergic receptor signaling pathway involved in heart process (obsolete GO:1901206)","synonyms":[{"name":"activation of adrenergic receptor signaling pathway involved in heart process","type":"narrow"},{"name":"activation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"activation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"positive regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"positive regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"up-regulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"up-regulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"up-regulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"},{"name":"upregulation of adrenergic receptor signaling pathway involved in heart process","type":"exact"},{"name":"upregulation of adrenergic receptor signalling pathway involved in heart process","type":"exact"},{"name":"upregulation of beta-adrenergic receptor signalling pathway involved in heart process","type":"narrow"}],"termid":"GO:1901206"}


id: FYPO:0007569
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which septation initiation network signaling is abnormal SIN signaling is mediated by the small GTPase Ras, and results in the initiation of contraction of the contractile ring at the beginning of cytokinesis and cell division by septum formation.","definition_xrefs":["GO:0031028","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response phenotype during vegetative growth","termid":"FYPO:0001342"},{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000298","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal septation initiation network signaling","synonyms":[{"name":"abnormal SIN signaling","type":"exact"},{"name":"abnormal SIN signalling","type":"exact"},{"name":"abnormal septation initiation network signaling during mitotic cell cycle","type":"related"},{"name":"abnormal septation initiation network signaling during vegetative growth","type":"exact"},{"name":"abnormal septation initiation network signalling","type":"exact"},{"name":"abnormal septation initiation signaling","type":"exact"},{"name":"septation initiation defective","type":"exact"}],"termid":"FYPO:0007569"}


id: PBO:0001318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecA family ATPase Rhp55","termid":"PBO:0001318"}


id: FYPO:0008221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during the G2/M phase of the mitotic cell cycle in which acetylation of lysine at position 56 of histone H3 is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:27268234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone H3-K56 acetylation during vegetative growth","termid":"FYPO:0008160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal histone H3-K56 acetylation during mitotic G2/M phase","termid":"FYPO:0008221"}


id: SO:0000339
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region in a genome which promotes recombination.","definition_xrefs":["SO:rd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"recombination_hotspot","secondary_identifiers":["http://en.wikipedia.org/wiki/Recombination_hotspot"],"synonyms":[{"name":"recombination hotspot","type":"exact"}],"termid":"SO:0000339"}


id: GO:0052066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The invasion by a symbiont of a host organism cell by utilizing the host phagocytosis mechanism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete entry of symbiont into host cell by promotion of host phagocytosis (obsolete GO:0052066)","synonyms":[{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism during symbiotic interaction","type":"related"},{"name":"entry of organism into cell of other organism by promotion of phagocytosis in other organism involved in symbiotic interaction","type":"related"},{"name":"entry of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of organism into host cell by promotion of host phagocytosis","type":"exact"},{"name":"penetration of symbiont into host cell by promotion of host phagocytosis","type":"exact"}],"termid":"GO:0052066"}


id: PBO:0052832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 1-1","termid":"PBO:0052832"}


id: PBO:0077590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein with metallophosphoesterase domain","termid":"PBO:0077590"}


id: GO:1905690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The disaggregation of a nucleus into its constituent components.","definition_xrefs":["GOC:pr","GOC:TermGenie","GOC:autophagy","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleus organization","termid":"GO:0006997"},{"relation_name":"is_a","term_name":"organelle disassembly","termid":"GO:1903008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nucleus disassembly","synonyms":[{"name":"cell nucleus disassembly","type":"exact"}],"termid":"GO:1905690"}


id: PATO:0001563
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A mass which is higher than normal or average.","definition_xrefs":["PATO:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"mass","termid":"PATO:0000125"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased mass","secondary_identifiers":["PATO:0000578"],"synonyms":[{"name":"high mass","type":"exact"},{"name":"large mass","type":"exact"}],"termid":"PATO:0001563"}


id: PBO:0028061
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_chromatin_during_mitotic_G2_phase","termid":"PBO:0028061"}


id: GO:1903611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of calcium-dependent ATPase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:10861851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of ATP-dependent activity","termid":"GO:0032780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of calcium-dependent ATPase activity","synonyms":[{"name":"down regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"down-regulation of calcium-dependent ATPase activity","type":"exact"},{"name":"downregulation of calcium-dependent ATPase activity","type":"exact"},{"name":"inhibition of calcium-dependent ATPase activity","type":"narrow"}],"termid":"GO:1903611"}


id: PBO:0001016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Pdr13 (predicted)","termid":"PBO:0001016"}


id: PBO:0078347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (CTC) 13-1","termid":"PBO:0078347"}


id: PBO:0079512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin reductase 3","termid":"PBO:0079512"}


id: GO:0046486
data:
  {"annotated_genes":["SJAG_02665","SJAG_04545","SJAG_02487","SJAG_00168","SJAG_02683","SJAG_03292","SJAG_04930","SJAG_01570","SJAG_02804","SJAG_01876","SJAG_04041","SJAG_02913","SJAG_03375","SJAG_03563","SJAG_03066","SJAG_00946","SJAG_02093","SJAG_02763","SJAG_02488","SJAG_03204","SJAG_00831","SJAG_00063","SJAG_03604","SJAG_00825","SJAG_02161","SJAG_04924","SJAG_04319","SJAG_00999","SJAG_01148","SJAG_02543","SJAG_03131","SJAG_04975","SJAG_02613","SJAG_00622","SJAG_03609","SJAG_00295","SJAG_01863","SJAG_02907","SJAG_01860","SJAG_00296","SJAG_06383","SJAG_05278","SJAG_03672","SJAG_04881","SJAG_01957","SJAG_05330","SJAG_01236","SJAG_01918","SJAG_04883","SJAG_04317","SJAG_04628","SJAG_03115","SJAG_02100","SJAG_02654","SJAG_01416","SJAG_04110","SJAG_01571","SJAG_00114","SJAG_02902","SJAG_04323","SJAG_04165","SJAG_02328","SJAG_03162","SJAG_01227","SJAG_04119","SJAG_02091","SJAG_02776","SJAG_03506","SJAG_03700","SJAG_00506","SJAG_02980","SJAG_03170","SJAG_03524","SJAG_03154","SJAG_02321","SJAG_06425","SJAG_00812","SJAG_04537","SJAG_03801","SJAG_02089","SJAG_00053","SJAG_02523","SJAG_05327","SJAG_00426","SJAG_01233","SJAG_04337","SJAG_03935","SJAG_03076","SJAG_03878","SJAG_01036","SJAG_01519","SJAG_02289","SJAG_00638","SJAG_00068","SJAG_04792","SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93857],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902635"},{"annotations":[73219,82000,119913,95050],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032049"},{"annotations":[57429,62186],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006657"},{"annotations":[116733,121369,81999,115074],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016024"},{"annotations":[114117,116244],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046339"},{"annotations":[73326],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046474"},{"annotations":[80499,78371,79344,73641,99780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046475"},{"annotations":[64555,71777,58837,79426,91563,74816,63642,77453,76919,75410,80217,77438,78373,58823,105724,79415,79588,79842,58410,95006,105786,61500,58662,89437,73841,64762,75093,78325,79105,79618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[75700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006676"},{"annotations":[60013,92418],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902647"},{"annotations":[106915,63346,73056,79706,95067,73444,73618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006654"},{"annotations":[96661,72192,98432,106354,80158,74449,95068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006656"},{"annotations":[119042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034638"},{"annotations":[81107,72855,105993,68973,95069,75471,62982,77319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006646"},{"annotations":[73820],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036149"},{"annotations":[120905,94642,78622,82050,119071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006661"},{"annotations":[115617,61022,97942,64876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046488"},{"annotations":[113312,113187,120546,93228,95233,98708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046854"},{"annotations":[64287,62559,62688,73513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0036092"},{"annotations":[68972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006659"},{"annotations":[76300],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006660"},{"annotations":[103438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006658"},{"annotations":[119598],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902648"},{"annotations":[76519,92042,73331,79006],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019432"},{"annotations":[93908,100479,73443,119650],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019433"},{"annotations":[92122,93909,95678,116848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006642"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving glycerolipids, any lipid with a glycerol backbone. Diacylglycerol and phosphatidate are key lipid intermediates of glycerolipid biosynthesis.","definition_xrefs":["PMID:8906569","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid metabolic process","termid":"GO:0006629"}],"gene_count":96,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_00063":null,"SJAG_00068":null,"SJAG_00114":null,"SJAG_00168":null,"SJAG_00295":null,"SJAG_00296":null,"SJAG_00426":null,"SJAG_00506":null,"SJAG_00622":null,"SJAG_00638":null,"SJAG_00812":null,"SJAG_00825":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_00946":null,"SJAG_00999":null,"SJAG_01036":null,"SJAG_01148":null,"SJAG_01227":null,"SJAG_01233":null,"SJAG_01236":null,"SJAG_01416":null,"SJAG_01519":null,"SJAG_01570":null,"SJAG_01571":null,"SJAG_01860":null,"SJAG_01863":null,"SJAG_01876":null,"SJAG_01918":null,"SJAG_01957":null,"SJAG_02089":null,"SJAG_02091":null,"SJAG_02093":null,"SJAG_02100":null,"SJAG_02161":null,"SJAG_02289":null,"SJAG_02321":null,"SJAG_02328":null,"SJAG_02487":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02543":null,"SJAG_02613":null,"SJAG_02654":null,"SJAG_02665":null,"SJAG_02683":null,"SJAG_02763":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02902":null,"SJAG_02907":null,"SJAG_02913":null,"SJAG_02980":null,"SJAG_03066":null,"SJAG_03076":null,"SJAG_03115":null,"SJAG_03131":null,"SJAG_03154":null,"SJAG_03162":null,"SJAG_03170":null,"SJAG_03204":null,"SJAG_03292":null,"SJAG_03375":null,"SJAG_03506":null,"SJAG_03524":null,"SJAG_03563":null,"SJAG_03604":null,"SJAG_03609":null,"SJAG_03672":null,"SJAG_03700":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03935":null,"SJAG_04041":null,"SJAG_04110":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04317":null,"SJAG_04319":null,"SJAG_04323":null,"SJAG_04337":null,"SJAG_04537":null,"SJAG_04545":null,"SJAG_04628":null,"SJAG_04792":null,"SJAG_04881":null,"SJAG_04883":null,"SJAG_04924":null,"SJAG_04930":null,"SJAG_04975":null,"SJAG_05278":null,"SJAG_05327":null,"SJAG_05330":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycerolipid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null,"PMID:25318672":null},"synonyms":[{"name":"glycerolipid metabolism","type":"exact"}],"termid":"GO:0046486","terms_by_termid":{"GO:0006506":null,"GO:0006642":null,"GO:0006646":null,"GO:0006654":null,"GO:0006656":null,"GO:0006657":null,"GO:0006658":null,"GO:0006659":null,"GO:0006660":null,"GO:0006661":null,"GO:0006676":null,"GO:0016024":null,"GO:0019432":null,"GO:0019433":null,"GO:0032049":null,"GO:0034638":null,"GO:0036092":null,"GO:0036149":null,"GO:0046339":null,"GO:0046474":null,"GO:0046475":null,"GO:0046488":null,"GO:0046854":null,"GO:1902635":null,"GO:1902647":null,"GO:1902648":null}}


id: PBO:0042493
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH13 antisense RNA 1","termid":"PBO:0042493"}


id: FYPO:0006766
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins occurs to a lower extent than normal during the meiotic cell cycle, in cells that have not arrested the meiotic cell cycle under conditions that normally trigger meiotic DNA replication checkpoint signaling and response.","definition_xrefs":["PomBase:mah","PMID:10521402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein phosphorylation during meiotic cell cycle","termid":"FYPO:0005577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002494","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein phosphorylation in absence of meiotic DNA replication checkpoint arrest","synonyms":[{"name":"decreased protein phosphorylation with abolished meiotic DNA replication checkpoint arrest","type":"exact"},{"name":"reduced protein phosphorylation in absence of meiotic DNA replication checkpoint arrest","type":"exact"}],"termid":"FYPO:0006766"}


id: GO:0008666
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-2,3,4,5-tetrahydrodipicolinate + H2O + succinyl-CoA = L-2-succinylamino-6-oxopimelate + CoA.","definition_xrefs":["RHEA:17325","EC:2.3.1.117"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-succinyltransferase activity","termid":"GO:0016749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","secondary_identifiers":["KEGG_REACTION:R04365","MetaCyc:TETHYDPICSUCC-RXN"],"synonyms":[{"name":"THDP N-succinyltransferase activity","type":"exact"},{"name":"succinyl-CoA:(S)-2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase activity","type":"related"},{"name":"succinyl-CoA:tetrahydrodipicolinate N-succinyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate N-succinyltransferase activity","type":"related"},{"name":"tetrahydrodipicolinate succinylase activity","type":"related"},{"name":"tetrahydrodipicolinate succinyltransferase activity","type":"related"},{"name":"tetrahydropicolinate succinylase activity","type":"related"}],"termid":"GO:0008666"}


id: PBO:0071549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 14","termid":"PBO:0071549"}


id: MONDO:0000984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited blood disorder characterized by a decreased synthesis of one of the polypeptide chains that form hemoglobin. Anemia results from this abnormal hemoglobin formation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited hemoglobinopathy","termid":"MONDO:0019050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thalassemia","secondary_identifiers":["EFO:1001996","ICD10CM:D56","MESH:D013789","MEDGEN:21121","ICD9:282.4","DOID:10241","GARD:7756","NCIT:C35069","ICD9:282.40","SCTID:40108008","UMLS:C0039730","ICD9:282.49","NANDO:2200626"],"synonyms":[{"name":"sickle-cell thalassemia with crisis","type":"exact"},{"name":"sickle-cell thalassemia without crisis","type":"exact"},{"name":"thalassemia Hb-S disease with crisis","type":"exact"},{"name":"thalassemia Hb-S disease without crisis","type":"exact"}],"termid":"MONDO:0000984","xrefs":{"Monarch":{"xref_id":"0000984"}}}


id: SO:0000875
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a sequence that is bound by a protein.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bound_by_factor","termid":"SO:0000277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bound_by_protein","synonyms":[{"name":"bound by protein","type":"exact"}],"termid":"SO:0000875"}


id: FYPO:0000265
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to stress during vegetative growth","termid":"FYPO:0000304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to DNA damage","synonyms":[{"name":"decreased growth during cellular response to DNA damage","type":"exact"},{"name":"decreased vegetative cell population growth during cellular response to DNA damage","type":"exact"},{"name":"hypersensitive to DNA damage","type":"exact"},{"name":"sensitive to DNA damage during mitotic cell cycle","type":"related"},{"name":"sensitive to DNA damage during vegetative growth","type":"exact"}],"termid":"FYPO:0000265"}


id: GO:0004676
data:
  {"annotated_genes":["SJAG_02468"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[119526],"is_not":false,"summary":null,"term":"GO:0004676"}]},"cv_name":"molecular_function","definition":"Phosphatidylinositol-3-phosphate-dependent catalysis of the reaction: ATP + a protein = ADP + a phosphoprotein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein serine/threonine kinase activity","termid":"GO:0004674"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02468":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016740","GO:0004672","GO:0003824","GO:0016301"],"is_obsolete":false,"name":"3-phosphoinositide-dependent protein kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-437195"],"synonyms":[{"name":"PDK activity","type":"related"},{"name":"phosphatidylinositol-3-phosphate protein kinase activity","type":"exact"}],"termid":"GO:0004676","terms_by_termid":{"GO:0004676":null}}


id: MONDO:0006453
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An aggressive, small cell, poorly differentiated thymic neuroendocrine carcinoma, characterized by the presence of a high mitotic rate and numerous apoptotic bodies.","definition_xrefs":["NCIT:C6460"],"gene_count":0,"genotype_count":0,"name":"obsolete thymic small cell carcinoma (obsolete MONDO:0006453)","termid":"MONDO:0006453","xrefs":{"Monarch":{"xref_id":"0006453"}}}


id: PR:P50528
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A serine/threonine-protein kinase PLK1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00894","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase plo1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C11.16","secondary_identifiers":["UniProtKB:P50528"],"synonyms":[{"name":"Spom972h-PLK1","type":"exact"}],"termid":"PR:P50528"}


id: PBO:0048623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GINS complex subunit 4","termid":"PBO:0048623"}


id: PBO:0069405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 665, pseudogene","termid":"PBO:0069405"}


id: GO:0098891
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The component of the presynaptic active zone membrane consisting of gene products and protein complexes that are loosely bound to one of its surfaces, but not integrated into the hydrophobic region.","definition_xrefs":["GOC:autophagy","GOC:mf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrinsic component of presynaptic membrane","termid":"GO:0098888"},{"relation_name":"part_of","term_name":"presynaptic active zone membrane","termid":"GO:0048787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0005575"],"is_obsolete":false,"name":"extrinsic component of presynaptic active zone membrane","termid":"GO:0098891"}


id: PBO:0018070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial respiratory chain complex II assembly protien Sdh8 (predicted)","termid":"PBO:0018070"}


id: PBO:0017779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"succinate dehydrogenase complex assembly protein Emi5 (predicted)","termid":"PBO:0017779"}


id: FYPO:0002484
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of two meiotic reciprocal recombination events (crossovers) close to each other is incresed. As a result, the resolution of meiotic recombination intermediates results in the formation of a crossover at a higher frequency than normal, and the occurrence of intergenic meiotic recombination is increased.","definition_xrefs":["PMID:22723423","PomBase:gs","PomBase:mah","PMID:11726502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased meiotic recombination","termid":"FYPO:0000487"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000293"],"is_obsolete":false,"name":"increased intergenic meiotic recombination","secondary_identifiers":["FYPO:0005374"],"synonyms":[{"name":"increased meiotic intergenic recombination","type":"exact"},{"name":"increased occurrence of meiotic cross-overs","type":"related"},{"name":"increased resolution of meiotic recombination intermediates with crossover formation","type":"exact"}],"termid":"FYPO:0002484"}


id: MONDO:1040041
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any exudative vitreoretinopathy caused by a variant in the FZD4 gene.","definition_xrefs":["PMID:21868098","PMID:15035989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exudative vitreoretinopathy","termid":"MONDO:0019516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"FZD4-related exudative vitreoretinopathy","synonyms":[{"name":"FZD4-related exudative vitreoretinopathy","type":"exact"}],"termid":"MONDO:1040041","xrefs":{"Monarch":{"xref_id":"1040041"}}}


id: PBO:0084778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial outer membrane receptor for cytosolic ribosomes; integral protein of the outer membrane that interacts with the nascent chain-associated complex (NAC) bound to ribosomes, contributing to co-translational mitochondrial import; interacts with porin (Por1p) and Om45p; abundance is decreased in cells grown in glucose relative to other carbon sources","termid":"PBO:0084778"}


id: GO:0061229
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a mesonephric juxtaglomerulus cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"juxtaglomerulus cell development","termid":"GO:0072142"},{"relation_name":"part_of","term_name":"mesonephric juxtaglomerulus cell differentiation","termid":"GO:0061207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesonephric juxtaglomerulus cell development","termid":"GO:0061229"}


id: GO:0002015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that controls blood pressure by sensing the amount of stretch occurring in the atria.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart process","termid":"GO:0003015"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by baroreceptor feedback","termid":"GO:0003025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of systemic arterial blood pressure by atrial baroreceptor feedback","synonyms":[{"name":"atrial baroreceptor regulation of systemic arterial blood pressure","type":"exact"},{"name":"atrial control of blood pressure","type":"related"},{"name":"atrial low pressure baroreceptor regulation of blood pressure","type":"exact"},{"name":"atrial reflex","type":"related"}],"termid":"GO:0002015"}


id: MONDO:0002357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the hepatic flexure of colon.","direct_ancestors":[{"relation_name":"is_a","term_name":"ascending colon cancer","termid":"MONDO:0002238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"hepatic flexure cancer","secondary_identifiers":["ICD10CM:C18.3","MEDGEN:509289","DOID:260","SCTID:363407001","ICD9:153.0","UMLS:C0153433"],"synonyms":[{"name":"Ca hepatic flexure - colon","type":"exact"},{"name":"cancer of hepatic flexure of colon","type":"exact"},{"name":"hepatic flexure of colon cancer","type":"exact"},{"name":"malignant hepatic flexure of colon neoplasm","type":"exact"},{"name":"malignant neoplasm of hepatic flexure","type":"exact"},{"name":"malignant neoplasm of hepatic flexure of colon","type":"exact"},{"name":"malignant tumor of hepatic flexure","type":"exact"},{"name":"malignant tumour of hepatic flexure","type":"exact"}],"termid":"MONDO:0002357","xrefs":{"Monarch":{"xref_id":"0002357"}}}


id: PBO:0054764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2176","termid":"PBO:0054764"}


id: PBO:0088780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysferlin-like membrane trafficking protein Mug65","termid":"PBO:0088780"}


id: PBO:0039443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and KH domain containing 1","termid":"PBO:0039443"}


id: GO:0055115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into diapause. Diapause is a neurohormonally mediated, dynamic state of low metabolic activity. Associated characteristics of this form of dormancy include reduced morphogenesis, increased resistance to environmental extremes, and altered or reduced behavioral activity. Full expression develops in a species-specific manner, usually in response to a number of environmental stimuli that precede unfavorable conditions. Once diapause has begun, metabolic activity is suppressed even if conditions favorable for development prevail. Once initiated, only certain stimuli are capable of releasing the organism from this state, and this characteristic is essential in distinguishing diapause from hibernation.","definition_xrefs":["GOC:mah","GOC:jid","GOC:ds"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dormancy process","termid":"GO:0022611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into diapause","secondary_identifiers":["Wikipedia:Diapause"],"termid":"GO:0055115"}


id: PBO:0056483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrin 3","termid":"PBO:0056483"}


id: PATO:0000443
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sleep pattern quality inhering in a bearer by virtue of the bearer's disrupted sleep during normal sleeping period; often accompanied by cataplexy, sleep paralysis.","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000443 narcolepsy (obsolete PATO:0000443)","termid":"PATO:0000443"}


id: GO:1905283
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of epidermal growth factor receptor signaling pathway involved in heart process.","definition_xrefs":["PMID:23069713","GOC:TermGenie","GOC:BHF_miRNA","GO_REF:0000058","GOC:BHF","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epidermal growth factor receptor signaling pathway","termid":"GO:0042059"},{"relation_name":"is_a","term_name":"negative regulation of multicellular organismal process","termid":"GO:0051241"},{"relation_name":"is_a","term_name":"regulation of epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905282"},{"relation_name":"negatively_regulates","term_name":"epidermal growth factor receptor signaling pathway involved in heart process","termid":"GO:1905251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in heart process","synonyms":[{"name":"down regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"down regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"down regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"down-regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"down-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"down-regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signaling pathway involved in heart process","type":"exact"},{"name":"downregulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"downregulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"downregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"downregulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"},{"name":"inhibition of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGF receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGF receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of EGFR signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of ERBB1 signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signaling pathway involved in heart process","type":"narrow"},{"name":"inhibition of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"inhibition of epidermal growth factor receptor signalling pathway involved in heart process","type":"narrow"},{"name":"inhibition of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"inhibition of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"narrow"},{"name":"negative regulation of EGF receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGF receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGF receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of EGFR signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of EGFR signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of ERBB1 signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of ERBB1 signaling pathway involved in heart process","type":"exact"},{"name":"negative regulation of epidermal growth factor receptor signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of epidermal growth factor receptor signalling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of epidermal growth factor receptor signalling pathway involved in heart process","type":"exact"},{"name":"negative regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in cardiac process","type":"related"},{"name":"negative regulation of receptor tyrosine-protein kinase erbB-1 signaling pathway involved in heart process","type":"exact"}],"termid":"GO:1905283"}


id: MONDO:0016919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndrome caused by partial chromosomal deletion","termid":"MONDO:0000761"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial deletion of the long arm of chromosome 21","secondary_identifiers":["MEDGEN:1825976","Orphanet:262173","GARD:20840","UMLS:C5679731"],"synonyms":[{"name":"partial deletion of chromosome 21q","type":"exact"},{"name":"partial deletion of the long arm of chromosome type 21","type":"exact"},{"name":"partial monosomy of chromosome 21q","type":"exact"},{"name":"partial monosomy of the long arm of chromosome 21","type":"exact"}],"termid":"MONDO:0016919","xrefs":{"Monarch":{"xref_id":"0016919"}}}


id: GO:0032776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The covalent transfer of a methyl group to C-5 or N-4 of cytosine in a DNA molecule.","definition_xrefs":["GOC:pf"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation on cytosine (obsolete GO:0032776)","synonyms":[{"name":"cytosine methylation","type":"broad"}],"termid":"GO:0032776"}


id: PBO:0027671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_response_to_mitotic_cell_cycle_spindle_assembly_checkpoint_signaling","termid":"PBO:0027671"}


id: PATO:0001457
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process inhering in bearer by virtue of the bearer's disposition to respond to stimulation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality of a process","termid":"PATO:0002062"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity of a process","synonyms":[{"name":"sensitivity of occurrent","type":"exact"}],"termid":"PATO:0001457"}


id: GO:0043816
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tRNA(Cys) + O-phospho-L-serine + ATP = AMP + diphosphate + phosphoseryl-tRNA(Cys).","definition_xrefs":["RHEA:25678","PMID:17110438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"phosphoserine-tRNA(Cys) ligase activity","secondary_identifiers":["EC:6.1.1.27"],"synonyms":[{"name":"O-phosphoseryl-tRNA(Cys) synthetase activity","type":"exact"},{"name":"SepRS","type":"related"},{"name":"phosphoserine--tRNA(Cys) ligase activity","type":"exact"},{"name":"phosphoserine-tRNACys ligase activity","type":"exact"}],"termid":"GO:0043816"}


id: PR:O94663
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar-sorting protein SNF8 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12806:SF0","OMA:SCHPO02784","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar-sorting protein dot2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.05c","secondary_identifiers":["UniProtKB:O94663"],"synonyms":[{"name":"ELL-associated protein of 30 kDa homolog dot2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SNF8","type":"exact"},{"name":"defective organization of telomere protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94663"}


id: GO:0002748
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Antigen processing and presentation which is initiated by uptake of antigen bound to a cell surface pattern recognition receptor (PRR).","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation initiated by receptor mediated uptake of antigen","termid":"GO:0002745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation initiated by pattern recognition receptor mediated uptake of antigen","synonyms":[{"name":"antigen processing and presentation initiated by PAMP receptor mediated uptake of antigen","type":"exact"},{"name":"antigen processing and presentation initiated by PRR mediated uptake of antigen","type":"exact"}],"termid":"GO:0002748"}


id: PBO:0058658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6786","termid":"PBO:0058658"}


id: GO:0035876
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the association between sister chromatids of a replicated chromosome along the length of the chromosome arms, is maintained as chromosomes condense, attach to the spindle in a bipolar orientation, and congress to the metaphase plate during a meiotic cell cycle.","definition_xrefs":["PMID:1708436","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of meiotic sister chromatid cohesion, arms (obsolete GO:0035876)","synonyms":[{"name":"maintenance of meiotic sister chromatin cohesion along arms","type":"exact"},{"name":"maintenance of sister chromatin cohesion along arms at meiosis I","type":"exact"}],"termid":"GO:0035876"}


id: PBO:0085242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Peptidyl-prolyl cis-trans isomerase (cyclophilin); catalyzes the cis-trans isomerization of peptide bonds N-terminal to proline residues; potential role in the secretory pathway; CPR8 has a paralog, CPR4, that arose from the whole genome duplication","termid":"PBO:0085242"}


id: PBO:0082618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of a complex containing Cef1p; putatively involved in pre-mRNA splicing; has similarity to E. coli DnaJ and other DnaJ-like proteins and to S. pombe Cwf23p","termid":"PBO:0082618"}


id: PBO:0018244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec14 cytosolic factor family, glycerophospholipid-transfer protein Csr1 (predicted)","termid":"PBO:0018244"}


id: PBO:0047038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 104 member A","termid":"PBO:0047038"}


id: MONDO:0014435
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBS7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"},{"relation_name":"is_a","term_name":"BBS7-related ciliopathy","termid":"MONDO:1040042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 7","secondary_identifiers":["MESH:C565916","UMLS:C1859565","DOID:0110129","OMIM:615984","GARD:10206","MEDGEN:347180"],"synonyms":[{"name":"BBS7","type":"exact"},{"name":"BBS7 Bardet-Biedl syndrome","type":"exact"},{"name":"Bardet-Biedl syndrome 7","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBS7","type":"exact"},{"name":"Bardet-Biedl syndrome type 7","type":"exact"}],"termid":"MONDO:0014435","xrefs":{"Monarch":{"xref_id":"0014435"}}}


id: MONDO:0700215
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neoplasm associated with the expression of a Neurotrophic Tyrosine Receptor Kinase (NTRK) Fusion. NTRK fusion-positive tumors have been identified in a broad range of solid tumor types, including breast, cholangiocarcinoma, colorectal, gynecological, neuroendocrine, non-small cell lung, salivary gland, pancreatic, sarcoma and thyroid cancers.","definition_xrefs":["PMID:30333516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTRK fusion positive cancer","synonyms":[{"name":"NTRK fusion positive neoplasm","type":"exact"},{"name":"NTRK fusion positive solid tumor","type":"exact"},{"name":"NTRK fusion positive solid tumour","type":"exact"},{"name":"neurotrophic tyrosine receptor kinase fusion positive cancer","type":"exact"},{"name":"neurotrophic tyrosine receptor kinase fusion positive neoplasm","type":"exact"},{"name":"neurotrophic tyrosine receptor kinase fusion positive solid tumor","type":"exact"},{"name":"neurotrophic tyrosine receptor kinase fusion positive solid tumour","type":"exact"}],"termid":"MONDO:0700215","xrefs":{"Monarch":{"xref_id":"0700215"}}}


id: FYPO:0003480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which one or more transfer RNA (tRNA) molecules contains no queuosine residues.","definition_xrefs":["PMID:24911101","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased queuosine level in tRNA","termid":"FYPO:0003427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0003427"}],"interesting_parent_ids":["FYPO:0003427","FYPO:0001985"],"is_obsolete":false,"name":"queuosine absent from tRNA","termid":"FYPO:0003480"}


id: PBO:0090756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3074 family protein, implicated in vesicle trafficking or lipid metabolism","termid":"PBO:0090756"}


