# terms

id: GO:0072727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a CCCP stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular response to CCCP (obsolete GO:0072727)","synonyms":[{"name":"cellular response to carbonyl cyanide m-chlorophenyl hydrazone","type":"exact"}],"termid":"GO:0072727"}


id: PBO:0028511
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028511"}


id: PBO:0005788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudogene wtf element Wtf24","termid":"PBO:0005788"}


id: MONDO:0957919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lui-Jee-Baron syndrome","secondary_identifiers":["MEDGEN:1849943","OMIM:301114","UMLS:C5882664"],"termid":"MONDO:0957919","xrefs":{"Monarch":{"xref_id":"0957919"}}}


id: GO:0036520
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling that mediates the transfer of information from an astrocyte to a dopaminergic neuron.","definition_xrefs":["PMID:21752258","PMID:12794311","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glial cell-neuron signaling","termid":"GO:0150098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"astrocyte-dopaminergic neuron signaling","synonyms":[{"name":"astrocyte-dopaminergic neuron cell signaling","type":"exact"},{"name":"dopaminergic neuron-astrocyte crosstalk","type":"related"},{"name":"mesencephalic dopaminergic neuron-astrocyte crosstalk","type":"narrow"},{"name":"midbrain dopaminergic neuron-astrocyte crosstalk","type":"narrow"}],"termid":"GO:0036520"}


id: GO:1904187
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transformation of host cell by virus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:12200142"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"regulates","term_name":"symbiont-mediated transformation of host cell","termid":"GO:0019087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of transformation of host cell by virus","synonyms":[{"name":"regulation of viral transformation","type":"exact"},{"name":"regulation of viral transformation of host cell","type":"exact"}],"termid":"GO:1904187"}


id: PBO:0065552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin E receptor 4 pseudogene 2","termid":"PBO:0065552"}


id: PBO:0034465
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-growth_auxotrophic_for_magnesium","termid":"PBO:0034465"}


id: GO:1904095
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of endosperm development.","definition_xrefs":["GO_REF:0000058","PMID:25194028","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of endosperm development","termid":"GO:2000014"},{"relation_name":"is_a","term_name":"negative regulation of reproductive process","termid":"GO:2000242"},{"relation_name":"negatively_regulates","term_name":"endosperm development","termid":"GO:0009960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endosperm development","synonyms":[{"name":"down regulation of endosperm development","type":"exact"},{"name":"down-regulation of endosperm development","type":"exact"},{"name":"downregulation of endosperm development","type":"exact"},{"name":"inhibition of endosperm development","type":"narrow"}],"termid":"GO:1904095"}


id: GO:1901975
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycerate is transported across a membrane.","definition_xrefs":["GOC:TermGenie","PMID:23382251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transport","termid":"GO:0034219"},{"relation_name":"is_a","term_name":"aldonate transmembrane transport","termid":"GO:0042873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"glycerate transmembrane transport","termid":"GO:1901975"}


id: MONDO:0006876
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tuberculous infection of the eye, primarily the iris, ciliary body, and choroid.","definition_xrefs":["MESH:D014392"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"tuberculosis","termid":"MONDO:0018076"},{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"},{"relation_name":"is_a","term_name":"eye infectious disorder","termid":"MONDO:0043885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ocular tuberculosis","secondary_identifiers":["DOID:0070344","EFO:1001070","SCTID:49107007","UMLS:C0041322","ICD9:017.30","ICD9:017.32","MEDGEN:52887"],"termid":"MONDO:0006876","xrefs":{"Monarch":{"xref_id":"0006876"}}}


id: PBO:0001119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4-kinase Lsb6 (predicted)","termid":"PBO:0001119"}


id: MONDO:0032684
data:
  {"annotated_genes":["SJAG_02908"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88051],"is_not":false,"summary":null,"term":"MONDO:0032684"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primordial dwarfism and slender bone disorder","termid":"MONDO:0800063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02908":null},"genotype_count":0,"is_obsolete":false,"name":"intrauterine growth retardation, metaphyseal dysplasia, adrenal hypoplasia congenita, genital anomalies, and immunodeficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684464","OMIM:618336","UMLS:C5193036"],"synonyms":[{"name":"IMAGE-I syndrome","type":"exact"},{"name":"IMAGEI","type":"related"},{"name":"INTRAUTERINE GROWTH RETARDATION, METAPHYSEAL DYSPLASIA, ADRENAL HYPOPLASIA CONGENITA, GENITAL ANOMALIES, AND IMMUNODEFICIENCY","type":"related"},{"name":"Imagei Syndrome","type":"related"}],"termid":"MONDO:0032684","terms_by_termid":{"MONDO:0032684":null},"xrefs":{"Monarch":{"xref_id":"0032684"}}}


id: PBO:0003775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing associated factor Saf4 (predicted)","termid":"PBO:0003775"}


id: PBO:0091468
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human MUTYH","termid":"PBO:0091468"}


id: GO:0019124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-isoleucine.","definition_xrefs":["RESID:AA0192"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-isoleucine racemization (obsolete GO:0019124)","termid":"GO:0019124"}


id: MONDO:1011521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, dog","secondary_identifiers":["OMIA:000437-9615"],"termid":"MONDO:1011521","xrefs":{"Monarch":{"xref_id":"1011521"}}}


id: GO:2001288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of caveolin-mediated endocytosis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of endocytosis","termid":"GO:0045807"},{"relation_name":"is_a","term_name":"regulation of caveolin-mediated endocytosis","termid":"GO:2001286"},{"relation_name":"positively_regulates","term_name":"caveolin-mediated endocytosis","termid":"GO:0072584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150"],"is_obsolete":false,"name":"positive regulation of caveolin-mediated endocytosis","synonyms":[{"name":"positive regulation of caveolae-dependent endocytosis","type":"exact"},{"name":"positive regulation of caveolae-mediated endocytosis","type":"exact"},{"name":"positive regulation of caveolin-dependent endocytosis","type":"exact"}],"termid":"GO:2001288"}


id: MONDO:0012802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculoauricular syndrome, Schorderet type is a rare, genetic developmental defect during embryogenesis characterized by various ophthalmic anomalies (including congenital microphthalmia, microcornea, cataract, anterior segment dysgenesis, ocular coloboma and early onset rod-cone dystrophy), and abnormal external ears (low-set pinna with crumpled helix, narrow intertragic incisure, abnormal bridge connecting the crus of the helix and the anthelix, narrow external acoustic meatus, and lobule aplasia).","definition_xrefs":["Orphanet:157962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic microphthalmia","termid":"MONDO:0016073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"oculoauricular syndrome","secondary_identifiers":["OMIM:612109","UMLS:C2677500","GARD:16988","DOID:0060482","MEDGEN:393758","MESH:C567416"],"synonyms":[{"name":"OCACS","type":"related"},{"name":"Schorderet-Munier-Franceschetti syndrome","type":"related"},{"name":"microphthalmia, microcornea, anterior segment dysgenesis, cataract, ocular coloboma, retinal pigment epithelium abnormalities, Rod-cone dystrophy, and anomalies of the external Ear","type":"related"},{"name":"oculoauricular syndrome","type":"exact"},{"name":"oculoauricular syndrome, Schorderet type","type":"related"}],"termid":"MONDO:0012802","xrefs":{"Monarch":{"xref_id":"0012802"}}}


id: PBO:0011999
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"previously annotated as a pseudogene","termid":"PBO:0011999"}


id: FYPO:0002798
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of protein degradation is decreased when the cell is subject to nitrogen starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"increased protein level during cellular response to nitrogen starvation","termid":"FYPO:0001219"},{"relation_name":"is_a","term_name":"abnormal protein degradation during nitrogen starvation","termid":"FYPO:0002796"},{"relation_name":"is_a","term_name":"decreased protein degradation","termid":"FYPO:0002797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein degradation during nitrogen starvation","synonyms":[{"name":"decreased protein catabolic process during nitrogen starvation","type":"exact"},{"name":"decreased protein catabolism during nitrogen starvation","type":"exact"},{"name":"decreased protein degradation during nitrogen depletion","type":"exact"},{"name":"decreased protein degradation during nitrogen deprivation","type":"exact"},{"name":"reduced protein degradation during nitrogen starvation","type":"exact"}],"termid":"FYPO:0002798"}


id: FYPO:0001340
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A stress response phenotype in which a cellular response to oxidative stress is abnormal in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular response to oxidative stress","termid":"FYPO:0000180"},{"relation_name":"is_a","term_name":"abnormal cellular response to stress during vegetative growth","termid":"FYPO:0001341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000298","FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"abnormal cellular response to oxidative stress during vegetative growth","synonyms":[{"name":"abnormal cellular response to oxidative stress during mitotic cell cycle","type":"related"},{"name":"abnormal oxidative stress response during vegetative growth","type":"exact"}],"termid":"FYPO:0001340"}


id: PBO:0075053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 116-16","termid":"PBO:0075053"}


id: GO:0141090
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: protein phospho-serine + inositol 5-triphosphate pentakisphosphate = protein diphospho-serine + inositol 5-diphosphate pentakisphosphate.","definition_xrefs":["PMID:36603579","RHEA:64104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, phosphate group as acceptor","termid":"GO:0016776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"protein serine pyrophosphorylase activity","synonyms":[{"name":"protein serine pyrophosphatase activity","type":"related"}],"termid":"GO:0141090"}


id: FYPO:0007764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which lipid droplets are larger than normal, and are surrounded by endoplasmic reticulum. Fewer droplets than normal may be present.","definition_xrefs":["PomBase:mah","PMID:25318672"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal lipid droplet morphology","termid":"FYPO:0000356"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"enlarged lipid droplets surrounded by endoplasmic reticulum","references_by_uniquename":{"PMID:25318672":null},"synonyms":[{"name":"enlarged lipid droplets surrounded by ER","type":"exact"},{"name":"enlarged lipid droplets surrounded by endoplasmic reticulum during mitotic cell cycle","type":"related"},{"name":"enlarged lipid droplets surrounded by endoplasmic reticulum during vegetative growth","type":"exact"},{"name":"large lipid droplets surrounded by endoplasmic reticulum","type":"exact"}],"termid":"FYPO:0007764"}


id: GO:0000492
data:
  {"annotated_genes":["SJAG_03036","SJAG_01567","SJAG_05223","SJAG_05679","SJAG_04355","SJAG_00752"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[69853,74873,78237,81688,99955,106067],"is_not":false,"summary":null,"term":"GO:0000492"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of proteins and a box C/D snoRNA to form a box C/D small nucleolar ribonucleoprotein (snoRNP) complex.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small nucleolar ribonucleoprotein complex assembly","termid":"GO:0000491"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_01567":null,"SJAG_03036":null,"SJAG_04355":null,"SJAG_05223":null,"SJAG_05679":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0065003"],"is_obsolete":false,"name":"box C/D snoRNP assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"box C/D small nucleolar ribonucleoprotein complex assembly","type":"exact"}],"termid":"GO:0000492","terms_by_termid":{"GO:0000492":null}}


id: PBO:0026717
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_level_of_ubiquitinated_protein_in_cell","termid":"PBO:0026717"}


id: MONDO:0000819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neural tube defect during pregnancy, resulting in the absence of a large portion of the brain and skull in the fetus.","definition_xrefs":["NCIT:C84560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"anencephaly","secondary_identifiers":["MEDGEN:8068","OMIMPS:206500","icd11.foundation:1292761836","ICD10CM:Q00.0","MESH:D000757","DOID:0060668","UMLS:C0002902"],"synonyms":[{"name":"anencephalus","type":"exact"}],"termid":"MONDO:0000819","xrefs":{"Monarch":{"xref_id":"0000819"}}}


id: MONDO:0011177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pure hair and nail ectodermal dysplasia in which the cause of the disease is a mutation in the KRT85 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hair and nail ectodermal dysplasia","termid":"MONDO:0019071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"ectodermal dysplasia 4, hair/nail type","secondary_identifiers":["DOID:0111658","GARD:18062","MEDGEN:870434","MESH:C566592","UMLS:C4024880","OMIM:602032"],"synonyms":[{"name":"ECTD4","type":"related"},{"name":"KRT85 pure hair and nail ectodermal dysplasia","type":"exact"},{"name":"ectodermal dysplasia 4, hair/nail type","type":"exact"},{"name":"ectodermal dysplasia, 'Pure' hair/nail type","type":"related"},{"name":"pili torti onychodysplasia","type":"related"},{"name":"pure hair and nail ectodermal dysplasia caused by mutation in KRT85","type":"exact"},{"name":"twisted hair with nail dysplasias","type":"related"}],"termid":"MONDO:0011177","xrefs":{"Monarch":{"xref_id":"0011177"}}}


id: PBO:0041777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 1","termid":"PBO:0041777"}


id: PBO:0061275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH oxidase activator 1","termid":"PBO:0061275"}


id: MONDO:0007509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant hypohidrotic ectodermal dysplasia","termid":"MONDO:0015884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant","secondary_identifiers":["UMLS:C3888065","DOID:0111663","GARD:18591","MEDGEN:854747","OMIM:129490"],"synonyms":[{"name":"ECTD10A","type":"related"},{"name":"ectodermal dysplasia 10A, hypohidrotic/hair/nail type, autosomal dominant","type":"exact"},{"name":"ectodermal dysplasia hypohidrotic autosomal dominant","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, autosomal dominant","type":"related"},{"name":"hypohidrotic ectodermal dysplasia autosomal dominant","type":"related"}],"termid":"MONDO:0007509","xrefs":{"Monarch":{"xref_id":"0007509"}}}


id: PBO:0070797
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L12 pseudogene 27","termid":"PBO:0070797"}


id: PBO:0027015
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_positive_regulation_of_protein_kinase_activity","termid":"PBO:0027015"}


id: PBO:0001759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonucleotide reductase (RNR) inhibitor family","termid":"PBO:0001759"}


id: MONDO:0005698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A clinical diagnosis presenting with painless cervical dilatation and spontaneous mid-trimester birth in recurrent pregnancies in the absence of spontaneous membrane rupture, bleeding or clinical chorioamnionitis.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervix disorder","termid":"MONDO:0002256"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cervical incompetence","secondary_identifiers":["MESH:D002581","EFO:0007202","ICD9:622.5","SCTID:17382005","MEDGEN:2972","DOID:9681","UMLS:C0007871","ICD9:654.50"],"termid":"MONDO:0005698","xrefs":{"Monarch":{"xref_id":"0005698"}}}


id: GO:0120290
data:
  {"annotated_genes":["SJAG_01677","SJAG_01410","SJAG_02079","SJAG_05372","SJAG_05012","SJAG_01185","SJAG_00727","SJAG_01572","SJAG_02299","SJAG_03843","SJAG_01076","SJAG_02992"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91180,91609,93549,98194,98697,100965,101075,111602,112012,116345,117579,118867],"is_not":false,"summary":null,"term":"GO:0120290"}]},"cv_name":"biological_process","definition":"A cellular localization process where a DNA replication fork that has stalled is signaled to relocate and anchor to the nuclear periphery for the time necessary to complete recombination-dependent replication.","definition_xrefs":["GOC:mah","PMID:33159083","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular localization","termid":"GO:0051641"},{"relation_name":"part_of","term_name":"replication fork processing","termid":"GO:0031297"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_01076":null,"SJAG_01185":null,"SJAG_01410":null,"SJAG_01572":null,"SJAG_01677":null,"SJAG_02079":null,"SJAG_02299":null,"SJAG_02992":null,"SJAG_03843":null,"SJAG_05012":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260","GO:0051179"],"is_obsolete":false,"name":"stalled replication fork localization to nuclear periphery","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"stalled replication fork localization to nuclear periphery involved in replication fork processing","type":"exact"}],"termid":"GO:0120290","terms_by_termid":{"GO:0120290":null}}


id: GO:0000300
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Peripheral to that fraction of cells, prepared by disruptive biochemical methods, that includes the plasma and other membranes; can be extracted from membrane fraction with high concentrations of salt or high pH.","definition_xrefs":["PMID:10512869"],"gene_count":0,"genotype_count":0,"name":"obsolete peripheral to membrane of membrane fraction (obsolete GO:0000300)","synonyms":[{"name":"peripheral to membrane of membrane fraction","type":"exact"}],"termid":"GO:0000300"}


id: PBO:0074164
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G1","termid":"PBO:0074164"}


id: PBO:0005757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANCM-MHF complex subunit Mhf2","termid":"PBO:0005757"}


id: FYPO:0008091
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of mature, polyadenylated rRNA measured in a cell is higher than normal.","definition_xrefs":["PMID:36794724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered rRNA or precursor level","termid":"FYPO:0005996"},{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased polyadenylated rRNA level","termid":"FYPO:0008091"}


id: GO:1905160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of Factor XII activation.","definition_xrefs":["PMID:617517","GOC:TermGenie","GO_REF:0000058"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of Factor XII activation (obsolete GO:1905160)","synonyms":[{"name":"activation of Factor XII activation","type":"narrow"},{"name":"activation of Hageman factor activation","type":"narrow"},{"name":"positive regulation of Hageman factor activation","type":"exact"},{"name":"up regulation of Factor XII activation","type":"exact"},{"name":"up regulation of Hageman factor activation","type":"exact"},{"name":"up-regulation of Factor XII activation","type":"exact"},{"name":"up-regulation of Hageman factor activation","type":"exact"},{"name":"upregulation of Factor XII activation","type":"exact"},{"name":"upregulation of Hageman factor activation","type":"exact"}],"termid":"GO:1905160"}


id: GO:1902732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the multiplication or reproduction of chondrocytes by cell division, resulting in the expansion of their population. A chondrocyte is a polymorphic cell that forms cartilage.","definition_xrefs":["PMID:23212449","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell population proliferation","termid":"GO:0008284"},{"relation_name":"positively_regulates","term_name":"chondrocyte proliferation","termid":"GO:0035988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chondrocyte proliferation","synonyms":[{"name":"activation of cartilage cell proliferation","type":"narrow"},{"name":"activation of chondrocyte cell proliferation","type":"narrow"},{"name":"activation of chondrocyte proliferation","type":"narrow"},{"name":"positive regulation of cartilage cell proliferation","type":"exact"},{"name":"positive regulation of chondrocyte cell proliferation","type":"exact"},{"name":"up regulation of cartilage cell proliferation","type":"exact"},{"name":"up regulation of chondrocyte cell proliferation","type":"exact"},{"name":"up regulation of chondrocyte proliferation","type":"exact"},{"name":"up-regulation of cartilage cell proliferation","type":"exact"},{"name":"up-regulation of chondrocyte cell proliferation","type":"exact"},{"name":"up-regulation of chondrocyte proliferation","type":"exact"},{"name":"upregulation of cartilage cell proliferation","type":"exact"},{"name":"upregulation of chondrocyte cell proliferation","type":"exact"},{"name":"upregulation of chondrocyte proliferation","type":"exact"}],"termid":"GO:1902732"}


id: PBO:0060631
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCK interacting protein with SH3 domain","termid":"PBO:0060631"}


id: PBO:0080086
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin specific peptidase 47","termid":"PBO:0080086"}


id: PR:O74561
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC970.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74561"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized inositol polyphosphate kinase C970.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.08","synonyms":[{"name":"Spom972h-SPCC970.08","type":"exact"}],"termid":"PR:O74561"}


id: PBO:0076887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 38","termid":"PBO:0076887"}


id: FYPO:0002492
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA 5'-adenosine monophosphate hydrolase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA 5'-adenosine monophosphate hydrolase activity","termid":"FYPO:0002491"},{"relation_name":"is_a","term_name":"abolished nuclease activity","termid":"FYPO:0003164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abolished DNA 5'-adenosine monophosphate hydrolase activity","synonyms":[{"name":"DNA 5'-adenosine monophosphate hydrolase activity abolished","type":"exact"}],"termid":"FYPO:0002492"}


id: PBO:0004612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin C-terminal hydrolase Ubp3","termid":"PBO:0004612"}


id: MONDO:0020108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autoimmune hemolytic anemia (AIHA) is an autoimmune disorder in which various types of auto-antibodies are directed against red blood cells causing their survival to be shortened and resulting in hemolytic anemia.","definition_xrefs":["Orphanet:98375"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare acquired hemolytic anemia (obsolete MONDO:0015911)","termid":"MONDO:0015911"},{"relation_name":"is_a","term_name":"autoimmune disorder of blood","termid":"MONDO:0000602"},{"relation_name":"is_a","term_name":"hemolytic anemia","termid":"MONDO:0003664"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"autoimmune hemolytic anemia","secondary_identifiers":["MedDRA:10002046","NANDO:2100181","NCIT:C34378","SCTID:413603009","ICD9:283.0","DOID:718","UMLS:C0002880","icd11.foundation:1834341306","NORD:774","CSP:0427-1178","EFO:1001264","NANDO:1200305","MESH:D000744","OMIM:205700","GARD:5870","MEDGEN:1918"],"synonyms":[{"name":"AHA","type":"exact"},{"name":"AIHA","type":"exact"},{"name":"Anemia, Hemolytic, Acquired Autoimmune","type":"exact"},{"name":"acquired autoimmune hemolytic anaemia","type":"related"},{"name":"acquired autoimmune hemolytic anemia","type":"related"},{"name":"anaemia hemolytic autoimmune","type":"related"},{"name":"anemia hemolytic autoimmune","type":"related"},{"name":"anemia, autoimmune hemolytic","type":"related"},{"name":"autoimmune haemolytic anaemia","type":"exact"},{"name":"autoimmune haemolytic anemia","type":"exact"},{"name":"autoimmune hemolytic anemia","type":"exact"},{"name":"familial auto-immune hemolytic anaemia (subtype)","type":"related"},{"name":"familial auto-immune hemolytic anemia (subtype)","type":"related"},{"name":"idiopathic autoimmune hemolytic anaemia","type":"related"},{"name":"idiopathic autoimmune hemolytic anemia","type":"related"},{"name":"immuno-hemolytic anaemia","type":"related"},{"name":"immuno-hemolytic anemia","type":"related"}],"termid":"MONDO:0020108","xrefs":{"Monarch":{"xref_id":"0020108"}}}


id: PBO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAPADILINO syndrome","termid":"PBO:0002375"}


id: PBO:0049157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 2B","termid":"PBO:0049157"}


id: MONDO:0010799
data:
  {"annotated_genes":["SJAG_00358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86990,89271],"is_not":false,"summary":null,"term":"MONDO:0010799"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postlingual non-syndromic genetic hearing loss","termid":"MONDO:0016298"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0019497","MONDO:0004069"],"is_obsolete":false,"name":"deafness, aminoglycoside-induced","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:374074","MESH:C564013","DOID:0111734","Orphanet:168609","GARD:18161","UMLS:C1838854","OMIM:580000"],"synonyms":[{"name":"aminoglycoside-induced deafness","type":"exact"},{"name":"aminoglycoside-induced hearing loss","type":"broad"},{"name":"deafness, aminoglycoside-induced","type":"exact"},{"name":"deafness, mitochondrial, modifier of, mitochondrial","type":"exact"},{"name":"deafness, streptomycin-induced","type":"exact"},{"name":"mitochondrial isolated neurosensory deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial isolated neurosensory hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"mitochondrial isolated sensorineural deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial isolated sensorineural hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"mitochondrial non-syndromic neurosensory deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial non-syndromic neurosensory hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"mitochondrial non-syndromic sensorineural deafness with susceptibility to aminoglycoside exposure","type":"exact"},{"name":"mitochondrial non-syndromic sensorineural hearing loss with susceptibility to aminoglycoside exposure","type":"broad"},{"name":"streptomycin ototoxicity","type":"exact"}],"termid":"MONDO:0010799","terms_by_termid":{"MONDO:0010799":null},"xrefs":{"Monarch":{"xref_id":"0010799"}}}


id: PBO:0043438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondromodulin","termid":"PBO:0043438"}


id: MONDO:0002729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rhabdoid tumor that arises from the kidney. It occurs in children and it is associated with abnormalities of chromosome 22. It is characterized by the presence of cells with a large eccentric nucleus, prominent nucleolus, and abundant cytoplasm. The prognosis is poor.","definition_xrefs":["NCIT:C8715"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"},{"relation_name":"is_a","term_name":"kidney sarcoma","termid":"MONDO:0002930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"rhabdoid tumor of the kidney","secondary_identifiers":["EFO:1000512","MEDGEN:208930","DOID:3674","UMLS:C0854917"],"synonyms":[{"name":"MRTK","type":"exact"},{"name":"kidney rhabdoid cancer","type":"related"},{"name":"kidney rhabdoid tumor","type":"exact"},{"name":"kidney rhabdoid tumour","type":"exact"},{"name":"malignant rhabdoid tumor of kidney","type":"exact"},{"name":"malignant rhabdoid tumor of the kidney","type":"exact"},{"name":"malignant rhabdoid tumour of kidney","type":"exact"},{"name":"malignant rhabdoid tumour of the kidney","type":"exact"},{"name":"renal rhabdoid neoplasm","type":"exact"},{"name":"renal rhabdoid tumor","type":"exact"},{"name":"renal rhabdoid tumour","type":"exact"},{"name":"rhabdoid neoplasm of kidney","type":"exact"},{"name":"rhabdoid neoplasm of the kidney","type":"exact"},{"name":"rhabdoid tumor of kidney","type":"exact"},{"name":"rhabdoid tumor of the kidney","type":"exact"},{"name":"rhabdoid tumor of the kidney (RTK)","type":"exact"},{"name":"rhabdoid tumour of kidney","type":"exact"},{"name":"rhabdoid tumour of the kidney (RTK)","type":"exact"}],"termid":"MONDO:0002729","xrefs":{"Monarch":{"xref_id":"0002729"}}}


id: PBO:0026872
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phosphorylation_of_RNA_polymerase_II_C-terminal_domain_serine_5_residues_during_vegetative_growth","termid":"PBO:0026872"}


id: PBO:0041668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 1","termid":"PBO:0041668"}


id: PBO:0082127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aconitase; required for the tricarboxylic acid (TCA) cycle and also independently required for mitochondrial genome maintenance; component of the mitochondrial nucleoid; mutation leads to glutamate auxotrophy; mutation in human homolog ACO2 is associated with dominant optic nerve atrophy; human homolog ACO2 can complement yeast null mutant","termid":"PBO:0082127"}


id: MONDO:0850107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious cerebellitis","secondary_identifiers":["Orphanet:624244","UMLS:C5575321","GARD:22502","MEDGEN:1843009"],"termid":"MONDO:0850107","xrefs":{"Monarch":{"xref_id":"0850107"}}}


id: MONDO:1012351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive neuronopathy, non-human animal","termid":"MONDO:1011871"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive neuronopathy, dog","secondary_identifiers":["OMIA:001282-9615"],"termid":"MONDO:1012351","xrefs":{"Monarch":{"xref_id":"1012351"}}}


id: MONDO:0005240
data:
  {"annotated_genes":["SJAG_03787","SJAG_03994","SJAG_04148","SJAG_01374","SJAG_04881","SJAG_04260","SJAG_02330","SJAG_04017","SJAG_03182","SJAG_02208","SJAG_00933","SJAG_01185","SJAG_03677","SJAG_01370","SJAG_01143","SJAG_03986","SJAG_00440","SJAG_02977","SJAG_03371","SJAG_04335","SJAG_01941","SJAG_02231","SJAG_04013","SJAG_01183","SJAG_03361","SJAG_00864","SJAG_03280","SJAG_04621","SJAG_01144","SJAG_00471","SJAG_03375","SJAG_04000","SJAG_00394","SJAG_02463","SJAG_01896","SJAG_00136","SJAG_00516","SJAG_00093","SJAG_04978","SJAG_04001","SJAG_00118","SJAG_00846"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[87031],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008368"},{"annotations":[87469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011422"},{"annotations":[89049],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010359"},{"annotations":[88277],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013836"},{"annotations":[87073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011303"},{"annotations":[87913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013589"},{"annotations":[88869,88868],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014462"},{"annotations":[88140],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0003789"},{"annotations":[88906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"},{"annotations":[88107,88106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014891"},{"annotations":[87571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0859328"},{"annotations":[88124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013898"},{"annotations":[88477,88476],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0020722"},{"annotations":[88655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013163"},{"annotations":[87878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014752"},{"annotations":[87801,87802],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014817"},{"annotations":[87800],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014818"},{"annotations":[88368],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032580"},{"annotations":[88370,88369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032581"},{"annotations":[88366],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032582"},{"annotations":[87887,87888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0026726"},{"annotations":[86974],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014099"},{"annotations":[87806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014257"},{"annotations":[88766,88768,88767],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007763"},{"annotations":[89233],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010645"},{"annotations":[88904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010438"},{"annotations":[87937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014166"},{"annotations":[87440],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010916"},{"annotations":[87734],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031062"},{"annotations":[88662],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013782"},{"annotations":[86972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011301"},{"annotations":[87409],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044726"},{"annotations":[87309],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009968"},{"annotations":[88119],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011268"},{"annotations":[87179],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012700"},{"annotations":[88808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054565"}]},"cv_name":"mondo","definition":"A disease involving the kidney.","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system 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disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:90708001","DOID:557","MEDGEN:9635","ICD9:583.81","UMLS:C0022658","EFO:0003086","MESH:D007674","NCIT:C3149"],"synonyms":[{"name":"disease of kidney","type":"exact"},{"name":"disease or disorder of kidney","type":"exact"},{"name":"disorder of kidney","type":"exact"},{"name":"kidney disease","type":"exact"},{"name":"kidney disease or disorder","type":"exact"},{"name":"kidney disorder","type":"exact"},{"name":"nephropathy","type":"related"},{"name":"renal disease","type":"exact"},{"name":"renal disorder","type":"exact"}],"termid":"MONDO:0005240","terms_by_termid":{"MONDO:0003789":null,"MONDO:0007763":null,"MONDO:0008368":null,"MONDO:0009968":null,"MONDO:0010359":null,"MONDO:0010438":null,"MONDO:0010645":null,"MONDO:0010916":null,"MONDO:0011268":null,"MONDO:0011301":null,"MONDO:0011303":null,"MONDO:0011422":null,"MONDO:0012700":null,"MONDO:0013163":null,"MONDO:0013458":null,"MONDO:0013589":null,"MONDO:0013782":null,"MONDO:0013836":null,"MONDO:0013898":null,"MONDO:0014099":null,"MONDO:0014166":null,"MONDO:0014257":null,"MONDO:0014462":null,"MONDO:0014752":null,"MONDO:0014817":null,"MONDO:0014818":null,"MONDO:0014891":null,"MONDO:0014937":null,"MONDO:0020722":null,"MONDO:0026726":null,"MONDO:0031062":null,"MONDO:0032580":null,"MONDO:0032581":null,"MONDO:0032582":null,"MONDO:0044726":null,"MONDO:0054565":null,"MONDO:0859328":null},"xrefs":{"Monarch":{"xref_id":"0005240"}}}


id: MONDO:0012137
data:
  {"annotated_genes":["SJAG_03703","SJAG_02431"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88297,88298],"is_not":false,"summary":null,"term":"MONDO:0012137"}]},"cv_name":"mondo","definition":"Carney complex-trismus-pseudocamptodactyly syndrome is a rare genetic heart-hand syndrome characterized by typical manifestations of the Carney complex (spotty pigmentation of the skin, familial cardiac and cutaneous myxomas and endocrinopathy) associated with trismus and distal arthrogryposis (presenting as involuntary contraction of distal and proximal interphalangeal joints of hands evident only on dorsiflexion of wrist and similar lower-limb contractures producing foot deformities).","definition_xrefs":["Orphanet:319340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Carney complex","termid":"MONDO:0015285"},{"relation_name":"is_a","term_name":"heart-hand syndrome","termid":"MONDO:0016432"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"Carney complex - trismus - pseudocamptodactyly syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1837245","OMIM:608837","GARD:17448","MEDGEN:332400"],"synonyms":[{"name":"CARNEY complex variant","type":"related"},{"name":"Carney complex variant","type":"exact"}],"termid":"MONDO:0012137","terms_by_termid":{"MONDO:0012137":null},"xrefs":{"Monarch":{"xref_id":"0012137"}}}


id: PBO:0042213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L1","termid":"PBO:0042213"}


id: PBO:0080507
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl-tRNA synthetase 1 pseudogene 1","termid":"PBO:0080507"}


id: PBO:0085539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein component of the small (40S) ribosomal subunit; homologous to mammalian ribosomal protein S9 and bacterial S4; RPS9A has a paralog, RPS9B, that arose from the whole genome duplication","termid":"PBO:0085539"}


id: MONDO:0859006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"proximal femoral focal deficiency","secondary_identifiers":["MEDGEN:609280","Orphanet:633228","UMLS:C0431996"],"termid":"MONDO:0859006","xrefs":{"Monarch":{"xref_id":"0859006"}}}


id: PR:O74992
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC338.18 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74992"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C338.18 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.18","synonyms":[{"name":"Spom972h-SPCC338.18","type":"exact"}],"termid":"PR:O74992"}


id: GO:1903183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of SUMO ligase activity.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GOC:bf","PMID:16731528","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of SUMO transferase activity (obsolete GO:1903183)","synonyms":[{"name":"down regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"down regulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"down regulation of SUMO ligase activity","type":"exact"},{"name":"down-regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"down-regulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"down-regulation of SUMO ligase activity","type":"exact"},{"name":"downregulation of SMT3 conjugating enzyme","type":"exact"},{"name":"downregulation of SUMO conjugating enzyme activity","type":"exact"},{"name":"downregulation of SUMO ligase activity","type":"exact"},{"name":"inhibition of SMT3 conjugating enzyme","type":"narrow"},{"name":"inhibition of SUMO conjugating enzyme activity","type":"narrow"},{"name":"inhibition of SUMO ligase activity","type":"narrow"},{"name":"negative regulation of SMT3 conjugating enzyme","type":"exact"},{"name":"negative regulation of SUMO conjugating enzyme activity","type":"exact"}],"termid":"GO:1903183"}


id: MONDO:0011699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 16p.","definition_xrefs":["DOID:0110904","PMID:11752413"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004335"],"is_obsolete":false,"name":"inflammatory bowel disease 8","secondary_identifiers":["OMIM:606668","UMLS:C1847719","MESH:C564682","MEDGEN:335753"],"synonyms":[{"name":"IBD8","type":"exact"},{"name":"inflammatory bowel disease 8","type":"exact"},{"name":"inflammatory bowel disease type 8","type":"exact"}],"termid":"MONDO:0011699","xrefs":{"Monarch":{"xref_id":"0011699"}}}


id: SO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A cloning vector that is a hybrid of lambda phages and a plasmid that can be propagated as a plasmid or packaged as a phage,since they retain the lambda cos sites.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vector_replicon","termid":"SO:0000440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cosmid","secondary_identifiers":["http://en.wikipedia.org/wiki/Cosmid"],"synonyms":[{"name":"cosmid vector","type":"exact"}],"termid":"SO:0000156"}


id: PBO:0029926
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_GMP_binding","termid":"PBO:0029926"}


id: PBO:0051962
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITPRIP antisense RNA 1","termid":"PBO:0051962"}


id: GO:0009555
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the pollen grain over time, from its formation to the mature structure. The process begins with the meiosis of the microsporocyte to form four haploid microspores. The nucleus of each microspore then divides by mitosis to form a two-celled organism, the pollen grain, that contains a tube cell as well as a smaller generative cell. The pollen grain is surrounded by an elaborate cell wall. In some species, the generative cell immediately divides again to give a pair of sperm cells. In most flowering plants, however this division takes place later, in the tube that develops when a pollen grain germinates.","definition_xrefs":["GOC:mtg_sensu","GOC:tb","GOC:mtg_plant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gametophyte development","termid":"GO:0048229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pollen development","secondary_identifiers":["GO:0009564","GO:0048231"],"synonyms":[{"name":"formation of generative and vegetative cells","type":"exact"},{"name":"male gametophyte development","type":"exact"},{"name":"male gametophyte formation","type":"exact"},{"name":"microgametophyte development","type":"exact"},{"name":"pollen grain formation","type":"exact"}],"termid":"GO:0009555"}


id: MONDO:0000514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the bone tissue.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone carcinoma","termid":"MONDO:0002415"},{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone squamous cell carcinoma","secondary_identifiers":["DOID:0050896"],"synonyms":[{"name":"bone tissue squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0000514","xrefs":{"Monarch":{"xref_id":"0000514"}}}


id: PBO:0057988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3913-2","termid":"PBO:0057988"}


id: PBO:0061915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily D member 3 pseudogene","termid":"PBO:0061915"}


id: PBO:0044147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CST telomere replication complex component 1","termid":"PBO:0044147"}


id: GO:0034893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: N-nitrodimethylamine + O2 + 2 H+ + 2 e- = N-nitromethylamine + formaldehyde + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete N-nitrodimethylamine hydroxylase activity (obsolete GO:0034893)","termid":"GO:0034893"}


id: GO:0048455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that contributes to the act of giving rise to the stamen. This process pertains to the initial formation of a structure from unspecified parts.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"floral organ formation","termid":"GO:0048449"},{"relation_name":"part_of","term_name":"stamen morphogenesis","termid":"GO:0048448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stamen formation","secondary_identifiers":["GO:0048427"],"termid":"GO:0048455"}


id: PBO:0077137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIRAP antisense RNA 1","termid":"PBO:0077137"}


id: PBO:0026757
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_septated_cell_with_condensed_chromatin","termid":"PBO:0026757"}


id: PBO:0109399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 26, pseudogene","termid":"PBO:0109399"}


id: GO:0019032
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral glycoprotein (obsolete GO:0019032)","synonyms":[{"name":"viral glycoprotein","type":"exact"}],"termid":"GO:0019032"}


id: MONDO:0000696
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete juvenile absence epilepsy (obsolete MONDO:0000696)","termid":"MONDO:0000696","xrefs":{"Monarch":{"xref_id":"0000696"}}}


id: PBO:0052707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 17 pseudogene 8","termid":"PBO:0052707"}


id: PBO:0004080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin","termid":"PBO:0004080"}


id: PBO:0006174
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_participant","termid":"PBO:0006174"}


id: MONDO:0100527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare primary bone dysplasia with increased bone density characterized by lethal neonatal dwarfism with hydrops, narrow chest and short limbs with extensive cortical thickening of all long bones, ribs, clavicles and scapulae, and coronal clefts in vertebral bodies.","definition_xrefs":["Orphanet:2204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysplastic cortical hyperostosis","termid":"MONDO:0016357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"dysplastic cortical hyperostosis, Kozlowski-Tsuruta type","secondary_identifiers":["GARD:2022","MEDGEN:1830504","UMLS:C5780027"],"synonyms":[{"name":"Kozlowski-Tsuruta syndrome","type":"exact"}],"termid":"MONDO:0100527","xrefs":{"Monarch":{"xref_id":"0100527"}}}


id: GO:0060697
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of phospholipid catabolism, the chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:tb","GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid catabolic process","termid":"GO:0050996"},{"relation_name":"is_a","term_name":"regulation of phospholipid catabolic process","termid":"GO:0060696"},{"relation_name":"is_a","term_name":"positive regulation of phospholipid metabolic process","termid":"GO:1903727"},{"relation_name":"positively_regulates","term_name":"phospholipid catabolic process","termid":"GO:0009395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"positive regulation of phospholipid catabolic process","termid":"GO:0060697"}


id: GO:0050323
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + H2O + taurine = AH(2) + NH4 + sulfoacetaldehyde.","definition_xrefs":["RHEA:18709","PMID:15073291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH2 group of donors","termid":"GO:0016638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"taurine dehydrogenase activity","secondary_identifiers":["EC:1.4.99.2","KEGG_REACTION:R07167","MetaCyc:TAURINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"taurine:(acceptor) oxidoreductase (deaminating)","type":"related"},{"name":"taurine:acceptor oxidoreductase (deaminating)","type":"related"}],"termid":"GO:0050323"}


id: MONDO:1011179
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteopetrosis that occurs in ass.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteopetrosis, non-human animal","termid":"MONDO:1010300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteopetrosis, ass","secondary_identifiers":["OMIA:000755-9793"],"termid":"MONDO:1011179","xrefs":{"Monarch":{"xref_id":"1011179"}}}


id: MONDO:0010725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A genetic ocular disease that is characterized by reduced visual acuity in males due to juvenile macular degeneration.","definition_xrefs":["Orphanet:792"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"retinoschisis","termid":"MONDO:0004579"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"},{"relation_name":"is_a","term_name":"vitreoretinal degeneration","termid":"MONDO:0020248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"X-linked retinoschisis","secondary_identifiers":["NCIT:C75483","DOID:0060763","MEDGEN:811458","UMLS:C3714753","GARD:4690","NANDO:1200938","NORD:1864","icd11.foundation:2074506458","OMIM:312700","SCTID:86923008"],"synonyms":[{"name":"RS","type":"related"},{"name":"RS1","type":"related"},{"name":"X-linked juvenile retinoschisis","type":"exact"},{"name":"X-linked juvenile retinoschisis 1","type":"related"},{"name":"X-linked juvenile retinoschisis type 1","type":"exact"},{"name":"X-linked retinoschisis","type":"exact"},{"name":"XJR","type":"related"},{"name":"XLRS","type":"exact"},{"name":"XLRS1","type":"related"},{"name":"juvenile X-linked retinoschisis","type":"exact"},{"name":"juvenile retinoschisis","type":"related"},{"name":"retinoschisis 1, X-linked, juvenile","type":"related"},{"name":"retinoschisis X-linked","type":"related"},{"name":"retinoschisis juvenile X chromosome-linked","type":"related"},{"name":"retinoschisis, X-linked","type":"exact"},{"name":"retinoschisis, X-linked recessive","type":"exact"}],"termid":"MONDO:0010725","xrefs":{"Monarch":{"xref_id":"0010725"}}}


id: GO:0046319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of glucosylceramide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucosylceramide biosynthetic process","termid":"GO:0046317"},{"relation_name":"is_a","term_name":"positive regulation of ceramide biosynthetic process","termid":"GO:2000304"},{"relation_name":"positively_regulates","term_name":"glucosylceramide biosynthetic process","termid":"GO:0006679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0044085","GO:0008150"],"is_obsolete":false,"name":"positive regulation of glucosylceramide biosynthetic process","synonyms":[{"name":"activation of glucosylceramide biosynthetic process","type":"narrow"},{"name":"positive regulation of glucosylceramide anabolism","type":"exact"},{"name":"positive regulation of glucosylceramide biosynthesis","type":"exact"},{"name":"positive regulation of glucosylceramide formation","type":"exact"},{"name":"positive regulation of glucosylceramide synthesis","type":"exact"},{"name":"stimulation of glucosylceramide biosynthetic process","type":"narrow"},{"name":"up regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"up-regulation of glucosylceramide biosynthetic process","type":"exact"},{"name":"upregulation of glucosylceramide biosynthetic process","type":"exact"}],"termid":"GO:0046319"}


id: PBO:0046896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM20B pseudogene 1","termid":"PBO:0046896"}


id: PBO:0065569
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin I2 synthase","termid":"PBO:0065569"}


id: GO:0048848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the neurohypophysis are generated and organized. The neurohypophysis is the part of the pituitary gland that secretes hormones involved in blood pressure regulation.","definition_xrefs":["GOC:cls","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gland morphogenesis","termid":"GO:0022612"},{"relation_name":"part_of","term_name":"neurohypophysis development","termid":"GO:0021985"},{"relation_name":"part_of","term_name":"hypophysis morphogenesis","termid":"GO:0048850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neurohypophysis morphogenesis","synonyms":[{"name":"neurophysis morphogenesis","type":"exact"},{"name":"posterior pituitary gland morphogenesis","type":"exact"},{"name":"posterior pituitary morphogenesis","type":"exact"}],"termid":"GO:0048848"}


id: MONDO:0000897
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete chronic myelomonocytic leukemia (obsolete MONDO:0000897)","termid":"MONDO:0000897","xrefs":{"Monarch":{"xref_id":"0000897"}}}


id: PBO:0048989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPC1 antisense RNA 1","termid":"PBO:0048989"}


id: MONDO:0004766
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute exacerbation of asthma, characterized by inadequate response to initial bronchodilators.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asthma","termid":"MONDO:0004979"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"status asthmaticus","secondary_identifiers":["ICD9:493.91","UMLS:C0038218","EFO:0008590","MEDGEN:11584","NCIT:C122577","ICD10WHO:J46","MESH:D013224","DOID:9362","SCTID:708090002"],"synonyms":[{"name":"asthma with status asthmaticus","type":"exact"},{"name":"severe asthma attack","type":"exact"}],"termid":"MONDO:0004766","xrefs":{"Monarch":{"xref_id":"0004766"}}}


id: GO:0071279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a cobalt ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to cobalt ion","termid":"GO:0032025"},{"relation_name":"is_a","term_name":"cellular response to metal ion","termid":"GO:0071248"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to cobalt ion","termid":"GO:0071279"}


id: PBO:0072395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 like","termid":"PBO:0072395"}


id: FYPO:0008290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a guanyl-nucleotide exchange factor activity is absent.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"},{"relation_name":"is_a","term_name":"abnormal guanyl-nucleotide exchange factor activity","termid":"FYPO:0008289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000654"],"is_obsolete":false,"name":"abolished guanyl-nucleotide exchange factor activity","synonyms":[{"name":"abolished GEF activity","type":"exact"}],"termid":"FYPO:0008290"}


id: PBO:0072501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 30","termid":"PBO:0072501"}


id: GO:0071729
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the beak are generated and organized. The avian beak is an external anatomical structure, in the head region, that is adapted for feeding self and young, catching prey, probing, etc. It encompasses, but is not restricted to, the maxilla, mandible, maxillary rhamphotheca, mandibular rhamphotheca, nostril, nasal fossa, nasal bones, egg tooth and rictus.","definition_xrefs":["ISBN:0702008729","GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"beak development","termid":"GO:0071728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beak morphogenesis","termid":"GO:0071729"}


id: GO:0014034
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes committed to become a neural crest cell.","definition_xrefs":["GOC:ef","GOC:dh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stem cell fate commitment","termid":"GO:0048865"},{"relation_name":"part_of","term_name":"neural crest formation","termid":"GO:0014029"},{"relation_name":"part_of","term_name":"neural crest cell differentiation","termid":"GO:0014033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neural crest cell fate commitment","termid":"GO:0014034"}


id: GO:0002195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involved in the biosynthesis of 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine (ms2io6A), a modified nucleoside present in position 37 (adjacent to and 3' of the anticodon) of tRNAs.","definition_xrefs":["UniPathway:UPA00729"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-methylthio-N-6-(cis-hydroxy)isopentenyl adenosine-tRNA biosynthesis (obsolete GO:0002195)","termid":"GO:0002195"}


id: PBO:0004950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp109","termid":"PBO:0004950"}


id: PBO:0036448
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Can't Stop Synthesising cell wall","termid":"PBO:0036448"}


id: PBO:0055893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 14","termid":"PBO:0055893"}


id: GO:0046807
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly and maintenance of the viral scaffold around which the viral capsid is constructed.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral capsid assembly","termid":"GO:0019069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral scaffold assembly and maintenance","termid":"GO:0046807"}


id: MONDO:0020560
data:
  {"annotated_genes":["SJAG_05313","SJAG_04755"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89336,89335],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013224"}]},"cv_name":"mondo","definition":"Atypical teratoid rhabdoid tumor (ATRT) is a highly malignant central nervous system (CNS) rhabdoid tumor (RT) found almost exclusively in children.","definition_xrefs":["Orphanet:99966"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"brain cancer","termid":"MONDO:0001657"},{"relation_name":"is_a","term_name":"central nervous system sarcoma","termid":"MONDO:0002217"},{"relation_name":"is_a","term_name":"rhabdoid tumor","termid":"MONDO:0002728"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04755":null,"SJAG_05313":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"atypical teratoid rhabdoid tumor","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1266184","NCIT:C6906","ONCOTREE:ATRT","MEDGEN:226853","GARD:16926","DOID:2129","EFO:1002008","ICDO:9508/3","NANDO:2200101"],"synonyms":[{"name":"AT/RT","type":"exact"},{"name":"ATRT","type":"exact"},{"name":"ATT/RHT","type":"exact"},{"name":"CNS rhabdoid neoplasm","type":"exact"},{"name":"CNS rhabdoid tumor","type":"exact"},{"name":"CNS rhabdoid tumour","type":"exact"},{"name":"atypical teratoid/rhabdoid tumor","type":"exact"},{"name":"atypical teratoid/rhabdoid tumor (WHO grade IV)","type":"exact"},{"name":"atypical teratoid/rhabdoid tumor (morphologic abnormality)","type":"exact"},{"name":"atypical teratoid/rhabdoid tumour","type":"exact"},{"name":"atypical teratoid/rhabdoid tumour (WHO grade IV)","type":"exact"},{"name":"atypical teratoid/rhabdoid tumour (morphologic abnormality)","type":"exact"},{"name":"central nervous system rhabdoid neoplasm","type":"exact"},{"name":"central nervous system rhabdoid tumor","type":"exact"},{"name":"central nervous system rhabdoid tumour","type":"exact"},{"name":"malignant brain rhabdoid neoplasm","type":"exact"},{"name":"malignant brain rhabdoid tumor","type":"exact"},{"name":"malignant brain rhabdoid tumour","type":"exact"},{"name":"malignant rhabdoid neoplasm of brain","type":"exact"},{"name":"malignant rhabdoid neoplasm of the brain","type":"exact"},{"name":"malignant rhabdoid tumor of brain","type":"exact"},{"name":"malignant rhabdoid tumor of the brain","type":"exact"},{"name":"malignant rhabdoid tumour of brain","type":"exact"},{"name":"malignant rhabdoid tumour of the brain","type":"exact"},{"name":"primary malignant brain rhabdoid neoplasm","type":"exact"},{"name":"primary malignant brain rhabdoid tumor","type":"exact"},{"name":"primary malignant brain rhabdoid tumour","type":"exact"},{"name":"primary malignant rhabdoid neoplasm of brain","type":"exact"},{"name":"primary malignant rhabdoid neoplasm of the brain","type":"exact"},{"name":"primary malignant rhabdoid tumor of brain","type":"exact"},{"name":"primary malignant rhabdoid tumor of the brain","type":"exact"},{"name":"primary malignant rhabdoid tumour of brain","type":"exact"},{"name":"primary malignant rhabdoid tumour of the brain","type":"exact"},{"name":"rhabdoid neoplasm of CNS","type":"exact"},{"name":"rhabdoid neoplasm of central nervous system","type":"exact"},{"name":"rhabdoid neoplasm of the CNS","type":"exact"},{"name":"rhabdoid neoplasm of the central nervous system","type":"exact"},{"name":"rhabdoid tumor of CNS","type":"exact"},{"name":"rhabdoid tumor of central nervous system","type":"exact"},{"name":"rhabdoid tumor of the CNS","type":"exact"},{"name":"rhabdoid tumor of the central nervous system","type":"exact"},{"name":"rhabdoid tumor predisposition syndrome","type":"related"},{"name":"rhabdoid tumour of CNS","type":"exact"},{"name":"rhabdoid tumour of central nervous system","type":"exact"},{"name":"rhabdoid tumour of the CNS","type":"exact"},{"name":"rhabdoid tumour of the central nervous system","type":"exact"},{"name":"rhabdoid tumour predisposition syndrome","type":"related"}],"termid":"MONDO:0020560","terms_by_termid":{"MONDO:0013224":null},"xrefs":{"Monarch":{"xref_id":"0020560"}}}


id: PBO:0068410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein, transmembrane 1 pseudogene 1","termid":"PBO:0068410"}


id: PBO:0079294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin tyrosine ligase like 11","termid":"PBO:0079294"}


id: PBO:0042605
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDRT15 pseudogene 5","termid":"PBO:0042605"}


id: PBO:0059097
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mortality factor 4 like 1 pseudogene 3","termid":"PBO:0059097"}


id: PBO:0016577
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana XCT","termid":"PBO:0016577"}


id: PBO:0091368
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased frequency of long tract gene conversion in the rad57delta single mutant was suppressed in the swi5delta rad57delta double mutant, to a level similar to that observed in the rad51 mutant","termid":"PBO:0091368"}


id: PBO:0064109
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKD1 antisense RNA 1","termid":"PBO:0064109"}


id: PBO:0002651
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"variant protein kinase 19 family protein","termid":"PBO:0002651"}


id: PBO:0017501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-methyl-2-oxobutanoatehydroxymethyltransferase Ecm31 (predicted)","termid":"PBO:0017501"}


id: PBO:0083996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Glyceraldehyde-3-phosphate dehydrogenase (GAPDH), isozyme 1; involved in glycolysis and gluconeogenesis; tetramer that catalyzes the reaction of glyceraldehyde-3-phosphate to 1,3 bis-phosphoglycerate; detected in the cytoplasm and cell wall; protein abundance increases in response to DNA replication stress; GAPDH-derived antimicrobial peptides secreted by S. cerevisiae are active against a wide variety of wine-related yeasts and bateria","termid":"PBO:0083996"}


id: MONDO:1011118
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypogonadism that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism, non-human animal","termid":"MONDO:1010276"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadism, dog","secondary_identifiers":["OMIA:000522-9615"],"termid":"MONDO:1011118","xrefs":{"Monarch":{"xref_id":"1011118"}}}


id: PR:O59824
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An ATP-dependent zinc metalloprotease FtsH that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO05014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent zinc metalloprotease YME1 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC965.04c","secondary_identifiers":["UniProtKB:O59824"],"synonyms":[{"name":"Spom972h-ftsH","type":"exact"}],"termid":"PR:O59824"}


id: GO:0001743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The initial developmental process that will lead to the formation of an eye.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal placode formation","termid":"GO:0060788"},{"relation_name":"part_of","term_name":"embryonic morphogenesis","termid":"GO:0048598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens placode formation","synonyms":[{"name":"optic placode formation","type":"related"}],"termid":"GO:0001743"}


id: GO:0003950
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + (ADP-D-ribosyl)(n)-acceptor = nicotinamide + (ADP-D-ribosyl)(n+1)-acceptor.","definition_xrefs":["EC:2.4.2.30"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pentosyltransferase activity","termid":"GO:0016763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016757"],"is_obsolete":false,"name":"NAD+ poly-ADP-ribosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-9686061","Reactome:R-HSA-2187325","Reactome:R-HSA-5688276","Reactome:R-HSA-5651723","Reactome:R-HSA-8938073","Reactome:R-HSA-8948800","MetaCyc:NAD+-ADP-RIBOSYLTRANSFERASE-RXN","Reactome:R-HSA-5687653","Reactome:R-HSA-9729279","Reactome:R-HSA-3640858"],"synonyms":[{"name":"ADP-ribosyltransferase (polymerizing) activity","type":"related"},{"name":"NAD ADP-ribosyltransferase activity","type":"exact"},{"name":"NAD+ ADP-ribosyltransferase activity","type":"broad"},{"name":"NAD+-protein poly-ADP-ribosyltransferase activity","type":"narrow"},{"name":"NAD+:poly(adenine-diphosphate-D-ribosyl)-acceptor ADP-D-ribosyl-transferase activity","type":"related"},{"name":"poly(ADP-ribose) synthase activity","type":"related"},{"name":"poly(ADP-ribose) synthetase activity","type":"related"},{"name":"poly(ADP-ribose)polymerase activity","type":"related"},{"name":"poly(adenosine diphosphate ribose) polymerase activity","type":"related"}],"termid":"GO:0003950"}


id: GO:0018142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a covalent cross-link between DNA and a protein.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-DNA covalent cross-linking (obsolete GO:0018142)","synonyms":[{"name":"DNA-protein covalent cross-linking","type":"exact"}],"termid":"GO:0018142"}


id: PBO:0068603
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 54, pseudogene","termid":"PBO:0068603"}


id: PR:O13786
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- pep7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar segregation protein pep7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G6.08","synonyms":[{"name":"Spom972h-pep7","type":"exact"}],"termid":"PR:O13786"}


id: PBO:0010218
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene merge, SPNCRNA.502 was a subsequence of SPNCRNA.1228","termid":"PBO:0010218"}


id: PBO:0044926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diacylglycerol kinase delta","termid":"PBO:0044926"}


id: MONDO:0017571
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Proteus-like syndrome describes patients who do not meet the diagnostic criteria for Proteus syndrome but who share a multitude of characteristic clinical features of the disease.","definition_xrefs":["Orphanet:2969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"PTEN hamartoma tumor syndrome","termid":"MONDO:0017623"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Proteus-like syndrome","secondary_identifiers":["SCTID:716862002","MEDGEN:356222","UMLS:C1866398","GARD:12801","NCIT:C179930"],"synonyms":[{"name":"Cohen-Hayden syndrome","type":"exact"},{"name":"Proteus like syndrome intellectual disability eye defect","type":"related"},{"name":"Proteus like syndrome mental retardation eye defect","type":"related"}],"termid":"MONDO:0017571","xrefs":{"Monarch":{"xref_id":"0017571"}}}


id: PBO:0090882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudouridine synthase Cbf5","termid":"PBO:0090882"}


id: PBO:0060310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin light chain kinase","termid":"PBO:0060310"}


id: FYPO:0004530
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which mitochondrial translation does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial translation","termid":"FYPO:0004528"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished mitochondrial translation","synonyms":[{"name":"abolished mitochondrial protein biosynthesis","type":"exact"},{"name":"abolished mitochondrial protein synthesis","type":"exact"},{"name":"abolished mitochondrial translation during mitotic cell cycle","type":"related"},{"name":"abolished mitochondrial translation during vegetative growth","type":"exact"},{"name":"mitochondrial translation abolished","type":"exact"}],"termid":"FYPO:0004530"}


id: MOD:01884
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a 4-aminobutyl group, usually derived from spermidine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkylated residue","termid":"MOD:00001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-aminobutylated residue","termid":"MOD:01884"}


id: PBO:0040758
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brain expressed associated with NEDD4 1","termid":"PBO:0040758"}


id: GO:0097029
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which antigen-activated dendritic cells acquire the specialized features of a mature conventional dendritic cell. Mature conventional dendritic cells upregulate the surface expression of MHC molecules, chemokine receptors and adhesion molecules, and increase the number of dendrites (cytoplasmic protrusions) in preparation for migration to lymphoid organs where they present antigen to T cells.","definition_xrefs":["GOC:BHF","PMID:15845453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte differentiation","termid":"GO:0002573"},{"relation_name":"is_a","term_name":"dendritic cell differentiation","termid":"GO:0097028"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mature conventional dendritic cell differentiation","termid":"GO:0097029"}


id: MONDO:0100459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A male infertility disease characterized by the absence of any measurable level of sperm in semen.","definition_xrefs":["DOID:14227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male infertility","termid":"MONDO:0005372"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"azoospermia","secondary_identifiers":["MEDGEN:2150","UMLS:C0004509","ICD9:606.0","MESH:D053713","SCTID:425558002","ICD10CM:N46.0","icd11.foundation:532688254"],"termid":"MONDO:0100459","xrefs":{"Monarch":{"xref_id":"0100459"}}}


id: PBO:0068777
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 14, pseudogene","termid":"PBO:0068777"}


id: PBO:0052381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 23","termid":"PBO:0052381"}


id: PBO:0067807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 109","termid":"PBO:0067807"}


id: PBO:0073730
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLBP divergent transcript","termid":"PBO:0073730"}


id: PBO:0081073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger DHHC-type palmitoyltransferase 5","termid":"PBO:0081073"}


id: GO:0047634
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-coumaroyl-CoA + agmatine = N-(4-guanidiniumylbutyl)-4-hydroxycinnamamide + CoA + H+.","definition_xrefs":["EC:2.3.1.64","RHEA:13405"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"agmatine N4-coumaroyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01617","MetaCyc:AGMATINE-N4-COUMAROYLTRANSFERASE-RXN"],"synonyms":[{"name":"4-coumaroyl-CoA:agmatine 4-N-coumaroyltransferase activity","type":"related"},{"name":"4-coumaroyl-CoA:agmatine N4-coumaroyltransferase activity","type":"related"},{"name":"agmatine coumaroyltransferase activity","type":"related"},{"name":"p-coumaroyl-CoA-agmatine N-p-coumaroyltransferase activity","type":"related"}],"termid":"GO:0047634"}


id: PBO:0056527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanocortin 4 receptor","termid":"PBO:0056527"}


id: FYPO:0006336
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which nucleation of microtubules from one or more microtubule organizing centers (MTOCs) occurs to a lesser extent than normal during mitosis.","definition_xrefs":["GO:0051418","PMID:8834801","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased microtubule nucleation during vegetative growth","termid":"FYPO:0006335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000054","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"decreased mitotic microtubule nucleation","synonyms":[{"name":"decreased microtubule nucleation by microtubule organizing center during mitosis","type":"exact"},{"name":"decreased microtubule nucleation during M phase of mitotic cell cycle","type":"related"},{"name":"decreased microtubule nucleation during mitosis","type":"exact"},{"name":"decreased mitotic microtubule nucleation during vegetative growth","type":"exact"},{"name":"reduced mitotic microtubule nucleation","type":"exact"}],"termid":"FYPO:0006336"}


id: PBO:0077005
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"THAP domain containing 12 pseudogene 7","termid":"PBO:0077005"}


id: GO:0090359
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of abscisic acid.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of abscisic acid biosynthetic process","termid":"GO:0010115"},{"relation_name":"is_a","term_name":"negative regulation of isoprenoid metabolic process","termid":"GO:0045827"},{"relation_name":"is_a","term_name":"negative regulation of lipid biosynthetic process","termid":"GO:0051055"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"abscisic acid biosynthetic process","termid":"GO:0009688"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006629"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"negative regulation of abscisic acid biosynthetic process","synonyms":[{"name":"negative regulation of abscisic acid biosynthesis","type":"exact"}],"termid":"GO:0090359"}


id: PBO:0113432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex component and TPR protein; mediates 3'-5' RNA degradation by the cytoplasmic exosome; null mutants have superkiller phenotype of increased viral dsRNAs and are synthetic lethal with mutations in 5'-3' mRNA decay; role in preventing L-A mycovirus pathogenesis; mutations in the human ortholog, TTC37, causes Syndromic diarrhea/Trichohepatoenteric (SD/THE) syndrome","termid":"PBO:0113432"}


id: PBO:0051871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily containing leucine rich repeat","termid":"PBO:0051871"}


id: PBO:0028280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_subtelomeric_heterochromatin","termid":"PBO:0028280"}


id: MONDO:0018633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"20q11.2 microdeletion syndrome is a rare, genetic, syndromic intellectual disability characterized by psychomotor delay, hypotonia, feeding difficulties, failure to thrive, anomalies of the hands and feet (clinodactyly, camptodactyly, brachydactyly, feet malposition), and craniofacial dysmorphism. Associated prenatal growth retardation, and gastrointestinal, heart and eye anomalies have been reported.","definition_xrefs":["Orphanet:444051"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 20","termid":"MONDO:0016918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20q11.2 microdeletion syndrome","secondary_identifiers":["GARD:21859","MEDGEN:1810637","UMLS:C5680063"],"synonyms":[{"name":"Del(20)(q11.2)","type":"exact"},{"name":"monosomy 20q11","type":"exact"}],"termid":"MONDO:0018633","xrefs":{"Monarch":{"xref_id":"0018633"}}}


id: GO:1904929
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Any coreceptor activity that is involved in Wnt signaling pathway, planar cell polarity pathway.","definition_xrefs":["PMID:24431302","GOC:PARL","GOC:bf","GO_REF:0000061","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete coreceptor activity involved in Wnt signaling pathway, planar cell polarity pathway (obsolete GO:1904929)","synonyms":[{"name":"Wnt co-receptor activity, non-canonical signaling","type":"broad"},{"name":"Wnt co-receptor, non-canonical pathway","type":"broad"},{"name":"Wnt/PCP co-receptor activity","type":"exact"},{"name":"coreceptor activity involved in PCP pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt receptor signalling pathway, planar cell polarity pathway","type":"exact"},{"name":"coreceptor activity involved in Wnt-JNK signaling pathway","type":"related"},{"name":"coreceptor activity involved in Wnt-PCP signaling pathway","type":"related"},{"name":"coreceptor activity involved in Wnt-activated signaling pathway, planar cell polarity pathway","type":"exact"},{"name":"coreceptor activity involved in non-canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor activity involved in planar cell polarity pathway","type":"exact"},{"name":"coreceptor, insoluble ligand activity involved in PCP pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt receptor signalling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt-JNK signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt-PCP signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in Wnt-activated signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in non-canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, insoluble ligand activity involved in planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in PCP pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt receptor signalling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt-JNK signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt-PCP signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in Wnt-activated signaling pathway, planar cell polarity pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in non-canonical Wnt signaling pathway","type":"related"},{"name":"coreceptor, soluble ligand activity involved in planar cell polarity pathway","type":"related"}],"termid":"GO:1904929"}


id: PBO:0079697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin like 7","termid":"PBO:0079697"}


id: GO:1902162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator.","definition_xrefs":["GOC:TermGenie","PMID:17719541"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator (obsolete GO:1902162)","termid":"GO:1902162"}


id: GO:0035919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism stops, prevents or reduces the frequency, rate or extent of the activity of a low voltage-gated calcium channel in another organism. A low voltage-gated channel is a channel whose open state is dependent on low voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:bf","GOC:fj","PMID:20920515","ISBN:0815340729"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of low voltage-gated calcium channel activity in another organism (obsolete GO:0035919)","synonyms":[{"name":"down-regulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"downregulation of low voltage-gated calcium channel activity in other organism","type":"exact"},{"name":"inhibition of low voltage-gated calcium channel activity in other organism","type":"narrow"},{"name":"negative regulation of low voltage gated calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-dependent calcium channel activity in other organism","type":"exact"},{"name":"negative regulation of low voltage-gated calcium channel activity in other organism","type":"exact"}],"termid":"GO:0035919"}


id: MOD:01082
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DeltaMass","termid":"MOD:00947"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-glycosyloxy- (hexosyl, C6) (of proline)","termid":"MOD:01082"}


id: PBO:0012012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing protein, human NSRP1 ortholog","termid":"PBO:0012012"}


id: GO:0170056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholesterol + H+ + NAD(P)H + O2 = 7-dehydrocholesterol + 2 H2O + NAD(P)+.","definition_xrefs":["PMID:21632547","PMID:31521708","EC:1.14.19.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sterol desaturase activity","termid":"GO:0070704"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"cholesterol 7-desaturase [NAD(P)H] activity","secondary_identifiers":["MetaCyc:RXN-16379"],"synonyms":[{"name":"C-7 cholesterol dehydrogenase","type":"exact"},{"name":"cholesterol 7,8-dehydrogenase","type":"exact"}],"termid":"GO:0170056"}


id: PBO:0066535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling 2","termid":"PBO:0066535"}


id: PBO:0072107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 5","termid":"PBO:0072107"}


id: PBO:0045922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EF-hand calcium binding domain 14 pseudogene 1","termid":"PBO:0045922"}


id: PBO:0087410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit (145 kDa) of TFIID and SAGA complexes; involved in RNA polymerase II transcription initiation and in chromatin modification","termid":"PBO:0087410"}


id: SO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Elements of the Tc1-Mariner terminal inverted repeat transposon superfamily (also called mariner transposons) are named after the Transponon of C. elegans number 1 transposasse. Their activity creates a 2-bp (TA) target-site duplication (TSD). Stowaway is the non-autonomous element in this superfamily usually shorter than 600 bp.","definition_xrefs":["PMID:17984973","PMID:8556864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"terminal_inverted_repeat_element","termid":"SO:0000208"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Tc1_Mariner_TIR_transposon","synonyms":[{"name":"DTT transposon","type":"exact"},{"name":"Mariner","type":"exact"},{"name":"Stowaway","type":"exact"},{"name":"Tc1 Mariner TIR transposon","type":"exact"},{"name":"Tc1 transposon","type":"exact"},{"name":"TcMar-Stowaway transposon","type":"exact"}],"termid":"SO:0002278"}


id: PBO:0031886
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human RFC5","termid":"PBO:0031886"}


id: PR:P40389
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rrg1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P40389"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein-lysine N-methyltransferase rrg1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC338.11c","synonyms":[{"name":"Spom972h-rrg1","type":"exact"},{"name":"elongation factor methyltransferase 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rapid response to glucose protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40389"}


id: MONDO:0022930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Dandy-Walker syndrome","termid":"MONDO:0009072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"Dandy-Walker malformation with nasopharyngeal teratoma and diaphragmatic hernia","secondary_identifiers":["MEDGEN:419910","MESH:C538340","GARD:137","UMLS:C2931823"],"synonyms":[{"name":"Aughton sloan Milad syndrome","type":"exact"}],"termid":"MONDO:0022930","xrefs":{"Monarch":{"xref_id":"0022930"}}}


id: PBO:0076772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain containing 12","termid":"PBO:0076772"}


id: GO:0008897
data:
  {"annotated_genes":["SJAG_01955","SJAG_04972","SJAG_03180"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59041,69303,76983],"is_not":false,"summary":null,"term":"GO:0008897"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + substrate-serine = adenosine 3',5'-bisphosphate + substrate-serine-4'-phosphopantetheine. The transfer of the 4'-phosphopantetheine (Ppant) co-factor from coenzyme A to the hydroxyl side chain of the serine residue of acyl- or peptidyl-carrier protein (ACP or PCP) to convert them from the apo to the holo form.","definition_xrefs":["EC:2.7.8.7","PMID:10320345","PMID:8939709","PMID:11867633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphotransferase activity, for other substituted phosphate groups","termid":"GO:0016780"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01955":null,"SJAG_03180":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016780","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"holo-[acyl-carrier-protein] synthase activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HOLO-ACP-SYNTH-RXN","GO:0008958","Reactome:R-HSA-199202","RHEA:12068"],"synonyms":[{"name":"4'-phosphopantetheinyl transferase activity","type":"related"},{"name":"4'-phosphopantetheinyltransferase activity","type":"exact"},{"name":"ACPS activity","type":"related"},{"name":"AcpS","type":"related"},{"name":"CoA-[4'-phosphopantetheine]:apo-acyl-carrier-protein 4'-pantetheinephosphotransferase activity","type":"related"},{"name":"CoA:apo-acyl-carrier-protein pantetheinephosphotransferase activity","type":"related"},{"name":"L-aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase activity","type":"narrow"},{"name":"P-pant transferase activity","type":"related"},{"name":"PPTase activity","type":"related"},{"name":"acyl carrier protein holoprotein (holo-ACP) synthetase activity","type":"related"},{"name":"acyl carrier protein synthase activity","type":"related"},{"name":"acyl carrier protein synthetase activity","type":"related"},{"name":"alpha-aminoadipate reductase phosphopantetheinyl transferase activity","type":"exact"},{"name":"alpha-aminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase activity","type":"related"},{"name":"alphaaminoadipic semialdehyde dehydrogenase-phosphopantetheinyl transferase activity","type":"related"},{"name":"coenzyme A:fatty acid synthetase apoenzyme 4'-phosphopantetheine transferase activity","type":"related"},{"name":"holo-ACP synthase activity","type":"related"},{"name":"holo-ACP synthetase activity","type":"related"},{"name":"holo-[peptidyl-carrier protein] synthase activity","type":"narrow"},{"name":"holo-acyl-carrier-protein synthase activity","type":"related"},{"name":"holosynthase activity","type":"related"},{"name":"phosphopantetheinyl transferase","type":"related"},{"name":"phosphopantetheinyltransferase activity","type":"exact"}],"termid":"GO:0008897","terms_by_termid":{"GO:0008897":null}}


id: MONDO:0020588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A lung tumor that arises from perivascular epithelioid cells (PECs).","definition_xrefs":["NCIT:C142783"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm with perivascular epithelioid cell differentiation","termid":"MONDO:0006359"},{"relation_name":"is_a","term_name":"lung neoplasm","termid":"MONDO:0021117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung PEComa","secondary_identifiers":["MEDGEN:1639012","UMLS:C4684821"],"synonyms":[{"name":"lung PEComa","type":"exact"},{"name":"lung pecomatous tumor","type":"exact"},{"name":"lung pecomatous tumour","type":"exact"}],"termid":"MONDO:0020588","xrefs":{"Monarch":{"xref_id":"0020588"}}}


id: MONDO:0000812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease involving the vertebral column.","definition_xrefs":["MONDO:patterns/location_top"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral column disorder","secondary_identifiers":["SCTID:699699005","ICD9:724.9","UMLS:C0037933","MESH:D013122","DOID:0060564","MEDGEN:52455"],"synonyms":[{"name":"disease of spine","type":"exact"},{"name":"disease of vertebral column","type":"exact"},{"name":"disease or disorder of vertebral column","type":"exact"},{"name":"disorder of vertebral column","type":"exact"},{"name":"spinal disease","type":"related"},{"name":"vertebral column disease","type":"exact"},{"name":"vertebral column disease or disorder","type":"exact"}],"termid":"MONDO:0000812","xrefs":{"Monarch":{"xref_id":"0000812"}}}


id: PBO:0051622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILF3 divergent transcript","termid":"PBO:0051622"}


id: MONDO:0019007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vaginal atresia","secondary_identifiers":["icd11.foundation:1126562070","GARD:18867","MedDRA:10046879","Orphanet:65681","UMLS:C1321884","MEDGEN:232948","HP:0000148"],"termid":"MONDO:0019007","xrefs":{"Monarch":{"xref_id":"0019007"}}}


id: MONDO:0007690
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aromatase excess syndrome is a rare, genetic endocrine disease characterized by increased levels of estrogen due to elevated extraglandular aromatase activity. Males present with heterosexual precocious puberty which manifests with pre- or peripubertal onset of gynecomastia, premature growth spurt, accelerated bone maturation resulting in decreased adult stature, and may present mild hypogonadotropic hypogonadism. Female patients may have isosexual precocious puberty or not have any manifestations at all.","definition_xrefs":["Orphanet:178345"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete anomaly of puberty or/and menstrual cycle of genetic origin (obsolete MONDO:0016072)","termid":"MONDO:0016072"},{"relation_name":"excluded_subClassOf","term_name":"precocious puberty in female","termid":"MONDO:0018561"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"aromatase excess syndrome","secondary_identifiers":["MEDGEN:409989","MESH:C000591739","ICD9:259.8","SCTID:709075008","OMIM:139300","GARD:12494","DOID:0090122","UMLS:C1970109","icd11.foundation:191989744"],"synonyms":[{"name":"AEXS","type":"exact"},{"name":"aromatase activity, increased","type":"related"},{"name":"aromatase excess syndrome","type":"exact"},{"name":"familial hyperestrogenism","type":"exact"},{"name":"gynecomastia, familial, due to increased aromatase activity","type":"exact"},{"name":"gynecomastia, hereditary","type":"exact"},{"name":"hereditary prepubertal gynecomastia","type":"exact"},{"name":"increased aromatase activity","type":"exact"}],"termid":"MONDO:0007690","xrefs":{"Monarch":{"xref_id":"0007690"}}}


id: PBO:0057877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3181","termid":"PBO:0057877"}


id: PR:Q9USJ2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC4B3.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USJ2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein got1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.02c","synonyms":[{"name":"Golgi transport protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPCC4B3.02c","type":"exact"}],"termid":"PR:Q9USJ2"}


id: MONDO:0006617
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"Skin diseases characterized by local or general distributions of blisters. They are classified according to the site and mode of blister formation. Lesions can appear spontaneously or be precipitated by infection, trauma, or sunlight. Etiologies include immunologic and genetic factors. (From Scientific American Medicine, 1990)","definition_xrefs":["MESH:D012872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vesiculobullous skin disease","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2731","EFO:1000774","MEDGEN:20778","UMLS:C0037275"],"synonyms":[{"name":"Sneddon Wilkinson disease","type":"narrow"},{"name":"Sneddon-Wilkinson disease","type":"narrow"},{"name":"bullous dermatoses","type":"related"},{"name":"bullous skin disease","type":"related"},{"name":"bullous skin diseases","type":"related"},{"name":"dermatoses, bullous","type":"related"},{"name":"dermatoses, subcorneal pustular","type":"related"},{"name":"dermatoses, vesiculobullous","type":"related"},{"name":"dermatosis, subcorneal pustular","type":"related"},{"name":"pustular dermatoses, subcorneal","type":"related"},{"name":"pustular dermatosis, subcorneal","type":"related"},{"name":"skin disease, bullous","type":"related"},{"name":"skin disease, vesicular","type":"related"},{"name":"skin disease, vesiculobullous","type":"related"},{"name":"skin diseases, bullous","type":"related"},{"name":"skin diseases, vesicular","type":"narrow"},{"name":"subcorneal pustular dermatoses","type":"narrow"},{"name":"subcorneal pustular dermatosis","type":"narrow"},{"name":"vesicular skin disease","type":"related"},{"name":"vesicular skin diseases","type":"related"},{"name":"vesiculobullous dermatoses","type":"related"},{"name":"vesiculobullous skin disease","type":"exact"},{"name":"vesiculobullous skin diseases","type":"related"}],"termid":"MONDO:0006617","terms_by_termid":{"MONDO:0008218":null},"xrefs":{"Monarch":{"xref_id":"0006617"}}}


id: PBO:0113229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-acetylglucosamine (GlcNAc) kinase; requires a divalent cation and a broad range of NTPs as phosphoryl donor to generate GlcNAc-6-phosphate, a substrate for glycan biosynthesis; promotes UDP-GlcNAc biosynthesis a precursor for chitin production; phylogenically distinct from known GlcNAc kinases and hexokinases; transcript is upregulated during sporulation and the unfolded protein response; contains a hexokinase-like ATPase domain; non-essential gene","termid":"PBO:0113229"}


id: RO:0002439
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"An interaction relationship involving a predation process, where the subject kills the target in order to eat it or to feed to siblings, offspring or group members","direct_ancestors":[{"relation_name":"is_a","term_name":"trophically_interacts_with","termid":"RO:0002438"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preys_on","termid":"RO:0002439"}


id: FYPO:0003976
data:
  {"alleles_by_uniquename":{"SJAG_04464:allele-1":{"allele_type":"amino_acid_mutation","description":"R152C","gene_uniquename":"SJAG_04464","name":"pim1-R152C","synonyms":[{"name":"Inferred CDK-phospho-mimic mutation","reference":"PMID:28954740","type":"exact"}],"uniquename":"SJAG_04464:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121383],"is_not":false,"summary":null,"term":"FYPO:0003976"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetatively growing cell is inviable, and has a nuclear envelope that is broken into multiple small fragments during mitotic telophase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"has_part","term_name":"fragmented nuclear envelope","termid":"FYPO:0003975"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"fragmented nuclear envelope","termid":"FYPO:0003975"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04464":null},"genotype_count":1,"genotypes_by_uniquename":{"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"pim1-R152C(aa)","display_uniquename":"pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04464:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0002403"],"is_obsolete":false,"name":"inviable vegetative cell with fragmented nuclear envelope during mitotic telophase","references_by_uniquename":{"PMID:28954740":null},"single_locus_annotated_genes":["SJAG_04464"],"single_locus_genotype_uniquenames":["pim1-R152C-R152C-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable cell with fragmented nuclear envelope during mitotic telophase during vegetative growth","type":"exact"},{"name":"inviable vegetative cell with fragmented nuclear envelope during telophase of mitotic cell cycle","type":"related"},{"name":"lethal; vegetative cell with fragmented nuclear envelope during mitotic telophase","type":"exact"}],"termid":"FYPO:0003976","terms_by_termid":{"FYECO:0000004":null,"FYPO:0003976":null}}


id: MONDO:0006448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete testicular teratoma (disease) (obsolete MONDO:0006448)","termid":"MONDO:0006448","xrefs":{"Monarch":{"xref_id":"0006448"}}}


id: PBO:0087535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of PPCDC and CoA-SPC complexes involved in CoA biosynthesis; subunits of the phosphopantothenoylcysteine decarboxylase (PPCDC) complex are: Cab3p, Sis2p, Vhs3p, while the subunits of the CoA-synthesizing protein complex (CoA-SPC) are: Cab2p, Cab3p, Cab4p, and Cab5p as well as Sis2p and Vhs3p; null mutant lethality is complemented by E. coli coaBC","termid":"PBO:0087535"}


id: PBO:0005645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transthyretin (predicted)","termid":"PBO:0005645"}


id: PBO:0061185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear-encoded mitochondrial tRNA-Gln (TTG) 15-1","termid":"PBO:0061185"}


id: PBO:0039915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 15","termid":"PBO:0039915"}


id: FYPO:0004592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An inviable phenotype observed in the vegetative growth phase of the life cycle in which a cell becomes cut after it has undergone a normal mitotic nuclear division and passed through the subsequent mitotic interphase. In a cut phenotype, a cell undergoes septation despite abnormal chromosome segregation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal mitosis following normal mitosis","termid":"FYPO:0004588"},{"relation_name":"is_a","term_name":"cut","termid":"FYPO:0000229"},{"relation_name":"is_a","term_name":"abnormal vegetative cell phenotype following normal mitosis","termid":"FYPO:0004593"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype during vegetative growth","termid":"FYPO:0004639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000337","FYPO:0001320","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000032","FYPO:0005447","FYPO:0000004","FYPO:0000641"],"is_obsolete":false,"name":"cut following normal mitosis","synonyms":[{"name":"cut following normal mitosis and interphase","type":"exact"},{"name":"cut following normal mitosis and passage through mitotic G1 phase","type":"exact"},{"name":"cut following normal mitosis during vegetative growth","type":"exact"},{"name":"cut following normal mitotic nuclear division","type":"exact"},{"name":"cut following normal nuclear division during mitotic cell cycle","type":"exact"},{"name":"septation following abnormal mitotic chromosome segregation with normal mitosis","type":"exact"}],"termid":"FYPO:0004592"}


id: PBO:0066521
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"repulsive guidance molecule BMP co-receptor b","termid":"PBO:0066521"}


id: SO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A histone 2A modification where the modification is the acetylation of the residue.","definition_xrefs":["ISBN:0815341059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_acetylation_site","termid":"SO:0001702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"histone_2A_acetylation_site","synonyms":[{"name":"H2Aac","type":"exact"},{"name":"histone 2A acetylation site","type":"exact"}],"termid":"SO:0002142"}


id: PBO:0068856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 95, pseudogene","termid":"PBO:0068856"}


id: PBO:0061315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPHS2 stomatin family member, podocin","termid":"PBO:0061315"}


id: PBO:0011081
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has fused lysosomes","termid":"PBO:0011081"}


id: PBO:0038348
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-active_ingredient_in'","termid":"PBO:0038348"}


id: PBO:0090784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Erv46","termid":"PBO:0090784"}


id: PBO:0045783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EDAR associated via death domain","termid":"PBO:0045783"}


id: PBO:0117394
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P subunit p21","termid":"PBO:0117394"}


id: GO:0019807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acyl-L-aspartate + H2O = a fatty acid anion + L-aspartate.","definition_xrefs":["EC:3.5.1.15"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"aspartoacylase activity","secondary_identifiers":["Reactome:R-HSA-5691507","RHEA:10872","MetaCyc:ASPARTOACYLASE-RXN"],"synonyms":[{"name":"N-acetylaspartate amidohydrolase activity","type":"related"},{"name":"N-acyl-L-aspartate amidohydrolase activity","type":"related"},{"name":"acetyl-aspartic deaminase activity","type":"related"},{"name":"acylase II","type":"related"},{"name":"aminoacylase II activity","type":"related"}],"termid":"GO:0019807"}


id: MONDO:0029812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete laminopathy with lipodystrophy (obsolete MONDO:0029812)","secondary_identifiers":["Orphanet:300763"],"termid":"MONDO:0029812","xrefs":{"Monarch":{"xref_id":"0029812"}}}


id: PBO:0026775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_chromatin_at_centromere_inner_repeat","termid":"PBO:0026775"}


id: MONDO:0859197
data:
  {"annotated_genes":["SJAG_03959"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88219],"is_not":false,"summary":null,"term":"MONDO:0859197"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03959":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with hypotonia, impaired speech, and dysmorphic facies","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5561997","DOID:0081262","MEDGEN:1794207","OMIM:619556"],"termid":"MONDO:0859197","terms_by_termid":{"MONDO:0859197":null},"xrefs":{"Monarch":{"xref_id":"0859197"}}}


id: GO:2000966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell wall macromolecule metabolic process","termid":"GO:0010981"},{"relation_name":"is_a","term_name":"regulation of polysaccharide metabolic process","termid":"GO:0032881"},{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000966"}


id: MONDO:0032771
data:
  {"annotated_genes":["SJAG_03163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89174],"is_not":false,"summary":null,"term":"MONDO:0032771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paraganglioma","termid":"MONDO:0000448"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03163":null},"genotype_count":0,"is_obsolete":false,"name":"paragangliomas 7","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5193116","GARD:16356","MEDGEN:1673088","OMIM:618475"],"synonyms":[{"name":"PARAGANGLIOMAS 7","type":"related"},{"name":"PGL7","type":"related"}],"termid":"MONDO:0032771","terms_by_termid":{"MONDO:0032771":null},"xrefs":{"Monarch":{"xref_id":"0032771"}}}


id: GO:0160045
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A multilamellar subcellular structure formed in the cytoplasm of developing neuron, composed of Tmem240 and Emd proteins.","definition_xrefs":["PMID:32535204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"TMEM240-body","synonyms":[{"name":"T240-body","type":"exact"}],"termid":"GO:0160045"}


id: GO:0045136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the secondary sexual characteristics over time, from their formation to the mature structures. In humans, these include growth of axillary, chest, and pubic hair, voice changes, testicular/penile enlargement, breast development and menstrual periods. Development occurs in response to sex hormone secretion.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"development of secondary sexual characteristics","termid":"GO:0045136"}


id: PBO:0083135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dual specificity protein phosphatase; regulates growth, sporulation, and glycogen accumulation in a cAMP-dependent protein kinase cascade dependent manner; mutants are defective in 60S ribosome assembly; positively regulates pre-autophagosomal structure (PAS) formation upon nitrogen starvation or rapamycin treatment","termid":"PBO:0083135"}


id: PBO:0066180
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 5","termid":"PBO:0066180"}


id: PBO:0061453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor subfamily 5 group A member 1","termid":"PBO:0061453"}


id: GO:0002846
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of T cell tolerance induction to tumor cell.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell mediated immune response to tumor cell","termid":"GO:0002840"},{"relation_name":"is_a","term_name":"regulation of tolerance induction to tumor cell","termid":"GO:0002843"},{"relation_name":"is_a","term_name":"regulation of peripheral T cell tolerance induction","termid":"GO:0002849"},{"relation_name":"regulates","term_name":"T cell tolerance induction to tumor cell","termid":"GO:0002411"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of T cell tolerance induction to tumor cell","termid":"GO:0002846"}


id: PBO:0001866
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acute myeloid leukemia","termid":"PBO:0001866"}


id: PBO:0041506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 28","termid":"PBO:0041506"}


id: MONDO:0008588
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary geniospasm is a movement disorder characterized by episodes of involuntary tremor of the chin and lower lip.","definition_xrefs":["Orphanet:53372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hereditary geniospasm","secondary_identifiers":["GARD:9501","MEDGEN:348757","MESH:C537682","OMIM:190100","SCTID:718103001","UMLS:C1860972"],"synonyms":[{"name":"GSM 1","type":"related"},{"name":"GSM1","type":"related"},{"name":"familial trembling of the chin","type":"exact"},{"name":"geniospasm","type":"related"},{"name":"geniospasm 1","type":"related"},{"name":"hereditary chin myoclonus","type":"exact"},{"name":"hereditary chin tremor/myoclonus","type":"related"},{"name":"hereditary chin-trembling","type":"exact"},{"name":"trembling Chin","type":"related"}],"termid":"MONDO:0008588","xrefs":{"Monarch":{"xref_id":"0008588"}}}


id: GO:2000171
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of dendrite development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of neuron projection development","termid":"GO:0010977"},{"relation_name":"is_a","term_name":"regulation of dendrite development","termid":"GO:0050773"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"dendrite development","termid":"GO:0016358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of dendrite development","termid":"GO:2000171"}


id: GO:0070765
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that has aspartic-type endopeptidase activity and contains a presenilin catalytic subunit (either PSEN1 or PSEN2), an APH1 subunit (multiple genes and splice variants exist), nicastrin (NCT), and presenilin enhancer (aka PEN-2 or Psenen), as the core complex. Variants of the complex with different subunit compositions differ in localization and specific substrates. Additionally, variants of the complex exist that contain a additional regulatory subunit as well as the four core subunits; known regulatory subunits include gamma-secretase-activating protein (aka gSAP), TMP1 (aka TMED10), and CD147 antigen (aka basigin). Gamma-secretase cleaves type I transmembrane protein substrates, including the cell surface receptor Notch and the amyloid-beta precursor protein.","definition_xrefs":["PMID:22122073","GOC:krc","PMID:32616437","PMID:25565961","PMID:15890777","PMID:28320827","PMID:15286082","PMID:17047368"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"},{"relation_name":"is_a","term_name":"catalytic complex","termid":"GO:1902494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"gamma-secretase complex","synonyms":[{"name":"CD147-gamma-secretase complex (APH-1a, PS-1, PEN-2, NCT variant)","type":"narrow"},{"name":"PS1 complex","type":"narrow"},{"name":"PS2 complex","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN1, PSENEN, NCSTN variant)","type":"narrow"},{"name":"gamma-secretase complex (APH1A, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN1, PSENEN, NCSTN)","type":"narrow"},{"name":"gamma-secretase complex (APH1B, PSEN2, PSENEN, NCSTN)","type":"narrow"},{"name":"presenilin complex","type":"exact"}],"termid":"GO:0070765"}


id: PBO:0034530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_at_centromere_inner_repeat","termid":"PBO:0034530"}


id: GO:1902539
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A macropinocytosis which involves another organism.","definition_xrefs":["GOC:bf","GOC:jl","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete multi-organism macropinocytosis (obsolete GO:1902539)","termid":"GO:1902539"}


id: GO:0004902
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with granulocyte colony-stimulating factor (G-CSF) and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:mah","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"granulocyte colony-stimulating factor receptor activity","secondary_identifiers":["GO:0030524"],"synonyms":[{"name":"CSF3R","type":"related"},{"name":"G-CSF receptor activity","type":"exact"},{"name":"granulocyte colony stimulating factor receptor activity","type":"exact"}],"termid":"GO:0004902"}


id: MONDO:0005044
data:
  {"annotated_genes":["SJAG_02977","SJAG_03081"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89322],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007781"},{"annotations":[88906],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013458"}]},"cv_name":"mondo","definition":"Persistently high systemic arterial blood pressure. Based on multiple readings (blood pressure determination), hypertension is currently defined as when systolic pressure is consistently greater than 140 mm Hg or when diastolic pressure is consistently 90 mm Hg or more.","definition_xrefs":["MESH:D006973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arterial disorder","termid":"MONDO:0000473"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02977":null,"SJAG_03081":null},"genotype_count":0,"is_obsolete":false,"name":"hypertensive disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:997.91","NCIT:C3117","HP:0000822","EFO:0000537","ICD10CM:I15","ICD9:401-405","SCTID:38341003","DOID:10763","MEDGEN:6969","ICD10CM:I10-I16","UMLS:C0020538"],"synonyms":[{"name":"HTN","type":"broad"},{"name":"blood pressure, high","type":"exact"},{"name":"blood pressure, increased","type":"exact"},{"name":"high blood pressure","type":"exact"},{"name":"hyperpiesia","type":"exact"},{"name":"hypertension","type":"related"},{"name":"hypertensive disease","type":"exact"},{"name":"increased blood pressure","type":"exact"},{"name":"pressure, high blood","type":"exact"},{"name":"vascular hypertensive disorder","type":"exact"}],"termid":"MONDO:0005044","terms_by_termid":{"MONDO:0007781":null,"MONDO:0013458":null},"xrefs":{"Monarch":{"xref_id":"0005044"}}}


id: PBO:0082232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-glucosidase; specificity for isomaltose, maltose, and palatinose, but not alpha-methylglucoside; most distant member of the IMA isomaltase family, but with similar catalytic properties as Ima1p and Ima2p; not required for isomaltose utilization, but Ima5p overexpression allows the ima1 null mutant to grow on isomaltose; can cleave alpha-1,3 linkage of nigerose and turanose and alpha-1,5 linkage of leucrose and is very sensitive to temperature in vitro","termid":"PBO:0082232"}


id: PBO:0016537
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae YPR081C","termid":"PBO:0016537"}


id: MOD:00917
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-threonine residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-threonine residue","synonyms":[{"name":"ModThr","type":"exact"}],"termid":"MOD:00917"}


id: GO:0033077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a precursor cell type acquires the specialized features of a T cell via a differentiation pathway dependent upon transit through the thymus.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell differentiation","termid":"GO:0030217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell differentiation in thymus","synonyms":[{"name":"T cell development in thymus","type":"related"},{"name":"thymic T cell differentiation","type":"exact"},{"name":"thymocyte cell differentiation","type":"exact"},{"name":"thymocyte differentiation","type":"exact"}],"termid":"GO:0033077"}


id: FYPO:0002451
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable and cell shape is altered in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal cell shape","termid":"FYPO:0001126"},{"relation_name":"has_part","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"inviable vegetative cell","termid":"FYPO:0001489"},{"relation_name":"is_a","term_name":"abnormal vegetative cell shape","termid":"FYPO:0002196"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001320","FYPO:0000002","FYPO:0000005","FYPO:0001985"],"is_obsolete":false,"name":"inviable vegetative cell with abnormal cell shape","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"inviable vegetative cell with abnormal cell shape during mitotic cell cycle","type":"related"},{"name":"inviable, abnormal cell shape during vegetative growth","type":"exact"},{"name":"lethal; vegetative cell with abnormal cell shape","type":"exact"}],"termid":"FYPO:0002451","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: PBO:0034277
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_end_location","termid":"PBO:0034277"}


id: GO:0000992
data:
  {"annotated_genes":["SJAG_03120","SJAG_00421","SJAG_05339","SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90195],"is_not":false,"summary":null,"term":"GO:0000992"},{"annotations":[71763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"},{"annotations":[71764],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001003"},{"annotations":[97597,79513],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001006"}]},"cv_name":"molecular_function","definition":"Binding to a specific upstream regulatory DNA sequence (transcription factor recognition sequence or binding site) located in cis relative to the transcription start site (i.e., on the same strand of DNA) of a gene transcribed by RNA polymerase III. The transcribed region might be contain a single gene or a cistron containing multiple genes.","definition_xrefs":["GOC:txnOH","PMID:12381659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cis-regulatory region sequence-specific DNA binding","termid":"GO:0000987"},{"relation_name":"is_a","term_name":"RNA polymerase III transcription regulatory region sequence-specific DNA binding","termid":"GO:0001016"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00421":null,"SJAG_03120":null,"SJAG_03354":null,"SJAG_05339":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0000976"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677","GO:0000976"],"is_obsolete":false,"name":"RNA polymerase III cis-regulatory region sequence-specific DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0000992","terms_by_termid":{"GO:0000992":null,"GO:0001002":null,"GO:0001003":null,"GO:0001006":null}}


id: PBO:0059835
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial fission regulator 1","termid":"PBO:0059835"}


id: PBO:0079785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 1 member A6","termid":"PBO:0079785"}


id: FYPO:0007049
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell during a cellular stress response to zinc ions is lower than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to zinc ion","termid":"FYPO:0001546"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased RNA level during stress response to zinc ion","synonyms":[{"name":"decreased RNA accumulation during stress response to zinc ion","type":"related"},{"name":"decreased RNA level during cellular response to excess zinc","type":"exact"},{"name":"decreased RNA level during cellular response to high zinc level","type":"exact"},{"name":"decreased RNA level during cellular response to replete zinc","type":"related"},{"name":"decreased RNA level during cellular stress response to zinc ion","type":"exact"},{"name":"decreased RNA level during response to zinc ion stress","type":"exact"},{"name":"decreased RNA level during response to zinc toxicity","type":"related"},{"name":"decreased RNA level during stress response to zinc","type":"exact"},{"name":"decreased RNA level during stress response to zinc ion during mitotic cell cycle","type":"related"},{"name":"decreased RNA level during stress response to zinc ion during vegetative growth","type":"exact"},{"name":"decreased mRNA level during stress response to zinc ion","type":"narrow"},{"name":"decreased transcript level during stress response to zinc ion","type":"exact"},{"name":"reduced RNA level during stress response to zinc ion","type":"exact"}],"termid":"FYPO:0007049"}


id: PBO:0063531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDZK1 interacting protein 1","termid":"PBO:0063531"}


id: PBO:0074582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 2A","termid":"PBO:0074582"}


id: GO:0106002
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that binds to, and promotes stabilization of, mRNA molecules containing the major coding region instability determinant (mCRD) by bridging the mCRD domain and the poly(A) tail of the mRNA. In human, it consists of CSDE1, HNRPD, PABPC1, PAIP1 and SYNCRIP.","definition_xrefs":["GOC:bhm","PMID:11051545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytosol","termid":"GO:0005829"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737","GO:0005829"],"is_obsolete":false,"name":"mCRD-mediated mRNA stability complex","synonyms":[{"name":"mCRD-poly(A)-bridging complex","type":"exact"},{"name":"major coding region determinant of instability-mediated mRNA stability complex","type":"exact"},{"name":"major coding region instability determinant-mediated mRNA stability complex","type":"exact"},{"name":"major coding region instability determinant-poly(A)-bridging complex","type":"exact"},{"name":"major coding-region determinant of instability - poly(A) tail-bridging complex","type":"exact"}],"termid":"GO:0106002"}


id: PBO:0002813
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kexin","termid":"PBO:0002813"}


id: PBO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.14.13.70","termid":"PBO:0000470"}


id: MONDO:0800424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, on chromosome 15","secondary_identifiers":["MEDGEN:394249","UMLS:C2677291"],"termid":"MONDO:0800424","xrefs":{"Monarch":{"xref_id":"0800424"}}}


id: GO:0051034
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of tRNA, transfer ribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA transmembrane transporter activity","termid":"GO:0051033"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"tRNA transmembrane transporter activity","termid":"GO:0051034"}


id: GO:0097624
data:
  {"annotated_genes":["SJAG_04697","SJAG_01177"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76806,90378],"is_not":false,"summary":null,"term":"GO:0097624"}]},"cv_name":"biological_process","definition":"The directed movement of UDP-galactose into the Golgi lumen across the Golgi membrane.","definition_xrefs":["PMID:11378902","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactose transmembrane transport","termid":"GO:0072334"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01177":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"UDP-galactose transmembrane import into Golgi lumen","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"UDP-galactose import into Golgi lumen","type":"broad"}],"termid":"GO:0097624","terms_by_termid":{"GO:0097624":null}}


id: MONDO:0006982
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Self-limited inflammation of the thyroid gland characterized by the presence of multinucleated giant cells. Patients present with neck pain, often associated with fever and dysphagia. The clinical course includes an initial phase of hyperthyroidism, followed by a phase of hypothyroidism, and eventually a return to normal thyroid function.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute thyroiditis","termid":"MONDO:0001949"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subacute thyroiditis","secondary_identifiers":["EFO:1001194","NCIT:C35071","ICD10CM:E06.1","icd11.foundation:1320394379","ICD9:245.1","MEDGEN:21549","MESH:D013968","MedDRA:10042298","DOID:7165","NCIT:C35828","SCTID:428041004","UMLS:C0040149"],"synonyms":[{"name":"De Quervain thyroiditis","type":"exact"},{"name":"De Quervain's thyroiditis","type":"exact"},{"name":"DeQuervain thyroiditis","type":"exact"},{"name":"Subacute granulomatous thyroiditis","type":"exact"},{"name":"Subacute thyroiditis","type":"exact"},{"name":"de Quervain's thyroiditis","type":"exact"},{"name":"giant-cell thyroiditis","type":"exact"},{"name":"granulomatous thyroiditis","type":"exact"}],"termid":"MONDO:0006982","xrefs":{"Monarch":{"xref_id":"0006982"}}}


id: GO:0160018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of platelet rolling.","definition_xrefs":["GO_REF:0000058","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of heterotypic cell-cell adhesion","termid":"GO:0034116"},{"relation_name":"is_a","term_name":"regulation of platelet rolling","termid":"GO:0160017"},{"relation_name":"positively_regulates","term_name":"platelet rolling","termid":"GO:0160015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of platelet rolling","termid":"GO:0160018"}


id: GO:0003169
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of veins of the heart are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous blood vessel morphogenesis","termid":"GO:0048845"},{"relation_name":"is_a","term_name":"coronary vasculature morphogenesis","termid":"GO:0060977"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"coronary vein morphogenesis","termid":"GO:0003169"}


id: MONDO:0012178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability with optic atrophy, facial dysmorphism, microcephaly, and short stature","secondary_identifiers":["OMIM:609037","MEDGEN:324635","MESH:C563810","UMLS:C1836915"],"synonyms":[{"name":"intellectual disability with optic atrophy, facial dysmorphism, microcephaly, and short stature","type":"exact"},{"name":"mental retardation with optic atrophy, facial dysmorphism, microcephaly, and short stature","type":"related"}],"termid":"MONDO:0012178","xrefs":{"Monarch":{"xref_id":"0012178"}}}


id: GO:0050370
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: tyrosine + O2 + NADPH + H+ = N-hydroxytyrosine + NADP+ + H2O.","definition_xrefs":["MetaCyc:TYROSINE-N-MONOOXYGENASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"tyrosine N-monooxygenase activity","secondary_identifiers":["RHEA:22464"],"synonyms":[{"name":"CYP79A1 activity","type":"narrow"},{"name":"L-tyrosine,NADPH:oxygen oxidoreductase (N-hydroxylating)","type":"exact"},{"name":"tyrosine N-hydroxylase activity","type":"exact"}],"termid":"GO:0050370"}


id: PBO:0085698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in retention of membrane proteins; including Sec12p, in the ER; localized to Golgi; functions as a retrieval receptor in returning membrane proteins to the ER","termid":"PBO:0085698"}


id: PR:O42644
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A CTP synthase 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00487","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTP synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC10F6.03c","secondary_identifiers":["UniProtKB:O42644"],"synonyms":[{"name":"CTP synthetase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-CTPS2","type":"exact"},{"name":"UTP--ammonia ligase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42644"}


id: MONDO:0009853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Imerslund-Grasbeck syndrome (IGS) or selective vitamin B12 (cobalamin) malabsorption with proteinuria is a rare autosomal recessive disorder characterized by vitamin B12 deficiency commonly resulting in megaloblastic anemia, which is responsive to parenteral vitamin B12 therapy and appears in childhood.","definition_xrefs":["Orphanet:35858"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"megaloblastic anemia","termid":"MONDO:0001700"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary anemia","termid":"MONDO:0016624"},{"relation_name":"is_a","term_name":"inborn disorder of cobalamin metabolism and transport","termid":"MONDO:0019220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0002280"],"is_obsolete":false,"name":"Imerslund-Grasbeck syndrome","secondary_identifiers":["OMIMPS:261100","ICD9:281.3","icd11.foundation:375969525","SCTID:360495000","GARD:7006","MEDGEN:1640347","UMLS:C4551825","MESH:C538556"],"synonyms":[{"name":"Gräsbeck-Imerslund disease","type":"related"},{"name":"Imerslund-Grasbeck syndrome","type":"exact"},{"name":"Imerslund-Gräsbeck syndrome","type":"exact"},{"name":"defect of enterocyte intrinsic factor receptor","type":"related"},{"name":"enterocyte cobalamin malabsorption","type":"related"},{"name":"familial megaloblastic anaemia","type":"exact"},{"name":"familial megaloblastic anemia","type":"exact"},{"name":"juvenile megaloblastic Anaemia","type":"exact"},{"name":"juvenile megaloblastic Anemia","type":"exact"},{"name":"selective cobalamin malabsorption with proteinuria","type":"exact"}],"termid":"MONDO:0009853","xrefs":{"Monarch":{"xref_id":"0009853"}}}


id: PBO:0066302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinol binding protein 4","termid":"PBO:0066302"}


id: GO:1902374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of rRNA catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:bf","PMID:20160119"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of catabolic process","termid":"GO:0009894"},{"relation_name":"is_a","term_name":"regulation of RNA metabolic process","termid":"GO:0051252"},{"relation_name":"regulates","term_name":"rRNA catabolic process","termid":"GO:0016075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of rRNA catabolic process","synonyms":[{"name":"regulation of rRNA breakdown","type":"exact"},{"name":"regulation of rRNA catabolism","type":"exact"},{"name":"regulation of rRNA degradation","type":"exact"}],"termid":"GO:1902374"}


id: PBO:0050032
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class II, DR alpha","termid":"PBO:0050032"}


id: PBO:0000871
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.3.2.2","termid":"PBO:0000871"}


id: MOD:00355
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to O-(riboflavin phosphoryl)-L-serine.","definition_xrefs":["RESID:AA0350","Unimod:442#S"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"riboflavin-phosphoryl","termid":"MOD:01164"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-(riboflavin phosphoryl)-L-serine","synonyms":[{"name":"(R)-2-amino-3-(riboflavin 5'-hydrogen phosphonoxy)propanoic acid","type":"exact"},{"name":"FMN","type":"related"},{"name":"MOD_RES FMN phosphoryl serine","type":"exact"},{"name":"O-(riboflavin phosphoryl)-L-serine","type":"exact"},{"name":"O3-(riboflavin phosphoryl)","type":"related"},{"name":"O3-seryl FMN","type":"exact"},{"name":"O3-seryl flavin mononucleotide","type":"exact"},{"name":"OFMNSer","type":"exact"}],"termid":"MOD:00355"}


id: MONDO:1012521
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral deafness and vestibular dysfunction, non-human animal","termid":"MONDO:1011710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bilateral deafness and vestibular dysfunction, pig","secondary_identifiers":["OMIA:002148-9823"],"termid":"MONDO:1012521","xrefs":{"Monarch":{"xref_id":"1012521"}}}


id: PBO:0042108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 181","termid":"PBO:0042108"}


id: PBO:0087057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L27B; homologous to mammalian ribosomal protein L27, no bacterial homolog; RPL27B has a paralog, RPL27A, that arose from the whole genome duplication","termid":"PBO:0087057"}


id: MONDO:0005036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from glandular epithelial cells of the stomach","direct_ancestors":[{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"},{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"gastric adenocarcinoma","secondary_identifiers":["EFO:0000503","DOID:3717","ONCOTREE:STAD","SCTID:408647009","NCIT:C4004","UMLS:C0278701","MEDGEN:82961","Orphanet:464463"],"synonyms":[{"name":"STAD","type":"related"},{"name":"adenocarcinoma - stomach","type":"exact"},{"name":"adenocarcinoma of stomach","type":"exact"},{"name":"adenocarcinoma of the stomach","type":"exact"},{"name":"gastric (stomach) adenocarcinoma","type":"exact"},{"name":"gastric adenocarcinoma","type":"exact"},{"name":"stomach adenocarcinoma","type":"exact"}],"termid":"MONDO:0005036","xrefs":{"Monarch":{"xref_id":"0005036"}}}


id: MONDO:0018316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"fatal post-viral neurodegenerative disorder","secondary_identifiers":["UMLS:C4751597","MEDGEN:1657472","GARD:21620","Orphanet:391343"],"termid":"MONDO:0018316","xrefs":{"Monarch":{"xref_id":"0018316"}}}


id: GO:0070634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ammonium ions from one side of an epithelium to the other.","definition_xrefs":["GOC:yaf","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transepithelial transport","termid":"GO:0070633"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"transepithelial ammonium transport","termid":"GO:0070634"}


id: MONDO:0011376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"paroxysmal familial ventricular fibrillation","termid":"MONDO:0100234"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"ventricular fibrillation, paroxysmal familial, type 1","secondary_identifiers":["MEDGEN:414502","MESH:C567851","OMIM:603829","SCTID:233915000","UMLS:C2751898"],"synonyms":[{"name":"IVF","type":"related"},{"name":"VF1","type":"exact"},{"name":"ventricular fibrillation during myocardial infarction, susceptibility to","type":"related"},{"name":"ventricular fibrillation, familial, 1","type":"exact"},{"name":"ventricular fibrillation, paroxysmal familial, 1","type":"exact"},{"name":"ventricular fibrillation, paroxysmal familial, type 1","type":"exact"}],"termid":"MONDO:0011376","xrefs":{"Monarch":{"xref_id":"0011376"}}}


id: PBO:0029037
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_cell_surface","termid":"PBO:0029037"}


id: PBO:0043284
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C-type lectin domain family 4 member G pseudogene 1","termid":"PBO:0043284"}


id: GO:0050395
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-D-glucose + vitexin = H+ + UDP + vitexin 2''-O-beta-D-glucoside.","definition_xrefs":["EC:2.4.1.105","RHEA:21956"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-glucosyltransferase activity","termid":"GO:0035251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016757"],"is_obsolete":false,"name":"vitexin beta-glucosyltransferase activity","secondary_identifiers":["KEGG_REACTION:R03565","MetaCyc:VITEXIN-BETA-GLUCOSYLTRANSFERASE-RXN"],"synonyms":[{"name":"UDP-glucose:vitexin 2''-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"UDPglucose:vitexin 2''-O-beta-D-glucosyltransferase activity","type":"related"},{"name":"uridine diphosphoglucose-vitexin 2''-glucosyltransferase activity","type":"related"},{"name":"vitexin b-glucosyltransferase activity","type":"exact"}],"termid":"GO:0050395"}


id: GO:1901269
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipooligosaccharide.","definition_xrefs":["UniPathway:UPA00501","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipooligosaccharide metabolic process","synonyms":[{"name":"lipooligosaccharide metabolism","type":"exact"}],"termid":"GO:1901269"}


id: PATO:0000327
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color brightness which is relatively low.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"color brightness","termid":"PATO:0000016"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low brightness","synonyms":[{"name":"dark","type":"exact"}],"termid":"PATO:0000327"}


id: GO:0051272
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the movement of a cellular component.","definition_xrefs":["GOC:jl","GOC:ai","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cellular component movement (obsolete GO:0051272)","synonyms":[{"name":"positive regulation of cellular component motion","type":"exact"}],"termid":"GO:0051272"}


id: MONDO:1012826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ichthyosis that occurs in cattle due to a mutation in the ABCA12 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"ichthyosis, cattle","termid":"MONDO:1011541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ichthyosis, ABCA12-related, cattle","secondary_identifiers":["OMIA:002238-9913"],"termid":"MONDO:1012826","xrefs":{"Monarch":{"xref_id":"1012826"}}}


id: FYPO:0003939
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of m7G(5')pppN diphosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000661","FYPO:0000707","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"abnormal m7G(5')pppN diphosphatase activity","synonyms":[{"name":"abnormal mRNA decapping activity","type":"related"}],"termid":"FYPO:0003939"}


id: MONDO:0700252
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paraneoplastic syndrome that involves the endocrine system.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"},{"relation_name":"is_a","term_name":"paraneoplastic syndrome","termid":"MONDO:0021073"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parneoplastic endocrine syndrome","termid":"MONDO:0700252","xrefs":{"Monarch":{"xref_id":"0700252"}}}


id: GO:0019576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of fructose that occurs in the presence of oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete aerobic fructose catabolic process (obsolete GO:0019576)","synonyms":[{"name":"aerobic fructose breakdown","type":"exact"},{"name":"aerobic fructose catabolism","type":"exact"},{"name":"aerobic fructose degradation","type":"exact"}],"termid":"GO:0019576"}


id: PBO:0046699
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ETS2 antisense RNA 1","termid":"PBO:0046699"}


id: PBO:0060900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuralized E3 ubiquitin protein ligase 3","termid":"PBO:0060900"}


id: PBO:0067495
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 630, pseudogene","termid":"PBO:0067495"}


id: PBO:0031689
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_peroxisome_localization","termid":"PBO:0031689"}


id: PBO:0081123
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger homeobox 2","termid":"PBO:0081123"}


id: GO:0007065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The joining of the sister chromatids of a replicated chromosome along the entire length of the chromosome that occurs during meiosis in a male.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic sister chromatid cohesion","termid":"GO:0051177"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"male meiosis sister chromatid cohesion","termid":"GO:0007065"}


id: MONDO:0018620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic adipsic hypernatraemia syndrome","secondary_identifiers":["GARD:21850","NANDO:2200325","MEDGEN:1814472","UMLS:C5681196","Orphanet:443101"],"termid":"MONDO:0018620","xrefs":{"Monarch":{"xref_id":"0018620"}}}


id: GO:0010558
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id: PBO:0066269
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id: PBO:0077404
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 139","termid":"PBO:0077404"}


id: PBO:0045070
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLGAP1 antisense RNA 2","termid":"PBO:0045070"}


id: MONDO:0041536
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A severe inflammatory disease that occurs sporadically and in outbreaks in Russia and Japan, caused by Yersinia pseudotubuclosis infection, an organism that typically causes self-limiting gastroenteritis in Europe.","definition_xrefs":["PMID:26819960"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Yersinia pseudotuberculosis infectious disease","termid":"MONDO:0007024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Far-East scarlet-like fever","secondary_identifiers":["SCTID:47277009","MEDGEN:548219","UMLS:C0277513"],"synonyms":[{"name":"FESLF","type":"exact"},{"name":"Izumi fever","type":"exact"}],"termid":"MONDO:0041536","xrefs":{"Monarch":{"xref_id":"0041536"}}}


id: GO:0021521
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a ventral spinal cord interneuron in an environment that is neutral with respect to the developmental pathway.","definition_xrefs":["GOC:dgh","GOC:dph","GOC:jid","GOC:cls","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron fate specification","termid":"GO:0048665"},{"relation_name":"is_a","term_name":"cell fate specification involved in pattern specification","termid":"GO:0060573"},{"relation_name":"part_of","term_name":"ventral spinal cord interneuron fate commitment","termid":"GO:0060579"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventral spinal cord interneuron specification","termid":"GO:0021521"}


id: GO:0097755
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that increases the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of blood vessel diameter (obsolete GO:0097755)","synonyms":[{"name":"positive regulation of vasodilation","type":"related"}],"termid":"GO:0097755"}


id: PBO:0004547
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAVE complex subunit Rav1","termid":"PBO:0004547"}


id: PR:O74424
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nup211 gene.","definition_xrefs":["UniProtKB:O74424","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin nup211 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC162.08c","synonyms":[{"name":"Spom972h-nup211","type":"exact"},{"name":"nuclear pore protein nup211 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74424"}


id: PBO:0080324
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 88 pseudogene","termid":"PBO:0080324"}


id: PBO:0043244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"claudin 4","termid":"PBO:0043244"}


id: PBO:0039822
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor guanine nucleotide exchange factor 2","termid":"PBO:0039822"}


id: GO:0050085
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  {"annotated_genes":["SJAG_05033"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[70113],"is_not":false,"summary":null,"term":"GO:0050085"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannitol + NADP+ = D-fructose + H+ + NADPH.","definition_xrefs":["EC:1.1.1.138","RHEA:16765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05033":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"mannitol 2-dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000117":null},"secondary_identifiers":["MetaCyc:MANNITOL-2-DEHYDROGENASE-NADP+-RXN","KEGG_REACTION:R00870"],"synonyms":[{"name":"D-mannitol:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"NADP-dependent mannitol dehydrogenase activity","type":"related"}],"termid":"GO:0050085","terms_by_termid":{"GO:0050085":null}}


id: MONDO:0007795
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mullerian duct anomalies-limb anomalies syndrome is characterized by the association of mullerian duct and distal limb anomalies. It has been described in five individuals from one family. Females presented with anomalies ranging from a vaginal septum to complete duplication of uterus and vagina, and males presented with micropenis. The limb anomalies varied from postaxial polydactyly to severe upper limb hypoplasia with split hand. The mode of transmission is autosomal dominant.","definition_xrefs":["Orphanet:2491"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"reproductive system disorder","termid":"MONDO:0005039"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mullerian duct anomalies-limb anomalies syndrome","secondary_identifiers":["OMIM:146160","MEDGEN:327078","GARD:2908","MESH:C537155","UMLS:C1840335"],"synonyms":[{"name":"Müllerian duct anomalies-limb anomalies syndrome","type":"related"},{"name":"hypomelia mullerian duct anomalies","type":"related"},{"name":"hypomelia with mullerian duct anomalies","type":"related"},{"name":"limb uterus syndrome","type":"related"},{"name":"limb-uterus syndrome","type":"related"},{"name":"severe upper limb hypoplasia and Mullerian duct anomalies","type":"related"}],"termid":"MONDO:0007795","xrefs":{"Monarch":{"xref_id":"0007795"}}}


id: PATO:0000028
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  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000028 macromolecular composition (obsolete PATO:0000028)","termid":"PATO:0000028"}


id: MONDO:1010144
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any congenital heart disease in which the cause of the disease is a mutation in the PLD1 gene.","definition_xrefs":["PMID:27799408","PMID:33645542","MONDO:patterns/disease_series_by_gene","PMID:38171566"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"PLD1-related congenital heart disease","synonyms":[{"name":"PLD1-related congenital heart disease","type":"exact"}],"termid":"MONDO:1010144","xrefs":{"Monarch":{"xref_id":"1010144"}}}


id: GO:0034106
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of erythrocyte clearance.","definition_xrefs":["PMID:12905029","PMID:14754397","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tissue remodeling","termid":"GO:0034103"},{"relation_name":"regulates","term_name":"erythrocyte clearance","termid":"GO:0034102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of erythrocyte clearance","synonyms":[{"name":"regulation of RBC clearance","type":"exact"},{"name":"regulation of neocytolysis","type":"narrow"},{"name":"regulation of red blood cell clearance","type":"exact"}],"termid":"GO:0034106"}


id: GO:0032499
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a peptidoglycan stimulus is received by a cell and converted into a molecular signal. Peptidoglycan is a bacterial cell wall macromolecule.","definition_xrefs":["GOC:add","ISBN:0721601464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of molecule of bacterial origin","termid":"GO:0032490"},{"relation_name":"is_a","term_name":"response to peptidoglycan","termid":"GO:0032494"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of peptidoglycan","termid":"GO:0032499"}


id: GO:1901870
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving ecgonone methyl ester.","definition_xrefs":["GOC:TermGenie","PMID:22665766"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"tropane alkaloid metabolic process","termid":"GO:0046448"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ecgonone methyl ester metabolic process","synonyms":[{"name":"ecgonone methyl ester metabolism","type":"exact"}],"termid":"GO:1901870"}


id: PBO:0045127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dmx like 1","termid":"PBO:0045127"}


id: PBO:0047496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fem-1 homolog A pseudogene 4","termid":"PBO:0047496"}


id: GO:0061128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of directed movement of a motile cell or organism up a concentration gradient of 3',5'-cAMP by the action of DIF-2. DIF-2 is a chlorinated alkylphenone.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of positive chemotaxis to cAMP by DIF-2","termid":"GO:0061121"},{"relation_name":"is_a","term_name":"positive regulation of positive chemotaxis to cAMP by chlorinated alkylphenone","termid":"GO:0061124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of chemotaxis to cAMP by DIF-2","termid":"GO:0061128"}


id: MONDO:0016199
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010977"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"qualitative or quantitative protein defects in neuromuscular diseases","termid":"MONDO:0016139"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"is_obsolete":false,"name":"qualitative or quantitative defects of protein SERCA1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5680836","Orphanet:209199","GARD:20438","MEDGEN:1843114"],"termid":"MONDO:0016199","terms_by_termid":{"MONDO:0010977":null},"xrefs":{"Monarch":{"xref_id":"0016199"}}}


id: GO:0005846
data:
  {"annotated_genes":["SJAG_01830","SJAG_04360","SJAG_01064"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72392,75264,117433],"is_not":false,"summary":null,"term":"GO:0005846"}]},"cv_name":"cellular_component","definition":"A conserved heterodimeric protein complex that binds to the 5' terminal cap structure m7G(5')ppp(5')N of nascent eukaryotic RNA polymerase II transcripts such as pre-mRNA and U snRNA. The consists of proteins known as CBP20 and CBP80, binds to cap structures in the nucleus, and is involved in pre-mRNA splicing, 3'-end formation, and RNA nuclear export.","definition_xrefs":["PMID:16043498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA cap binding complex","termid":"GO:0034518"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01064":null,"SJAG_01830":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"nuclear cap binding complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"CBC","type":"related"},{"name":"NCBP-NIP1 complex","type":"narrow"},{"name":"mRNA cap binding complex","type":"narrow"},{"name":"nuclear CBC","type":"exact"},{"name":"snRNA cap binding complex","type":"narrow"}],"termid":"GO:0005846","terms_by_termid":{"GO:0005846":null}}


id: GO:2000460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of eukaryotic cell surface binding.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of eukaryotic cell surface binding (obsolete GO:2000460)","synonyms":[{"name":"regulation of eukaryotic cell surface binding","type":"exact"}],"termid":"GO:2000460"}


id: GO:1990962
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a xenobiotic through the blood-brain barrier.","definition_xrefs":["PMID:25053619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic transport","termid":"GO:0042908"},{"relation_name":"is_a","term_name":"transport across blood-brain barrier","termid":"GO:0150104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"xenobiotic transport across blood-brain barrier","synonyms":[{"name":"drug transport across blood-brain barrier","type":"related"}],"termid":"GO:1990962"}


id: GO:0052394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of symbiont processes resulting in the thickening of its cell walls, occurring as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of defense-related symbiont cell wall thickening (obsolete GO:0052394)","synonyms":[{"name":"activation by organism of symbiont defense-related cell wall thickening","type":"exact"},{"name":"activation by organism of symbiont defensive cell wall thickening","type":"exact"},{"name":"induction by organism of defense-related symbiont cell wall thickening","type":"exact"},{"name":"induction by organism of symbiont defensive cell wall thickening","type":"exact"}],"termid":"GO:0052394"}


id: MONDO:0021012
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"visceral leishmaniasis","termid":"MONDO:0005445"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"susceptibility to visceral leishmaniasis, 1","secondary_identifiers":["UMLS:C1969520","MEDGEN:370034","OMIM:608207"],"synonyms":[{"name":"KAZA1","type":"exact"},{"name":"kala-Azar, susceptibility to, 1","type":"exact"},{"name":"leishmaniasis, visceral, susceptibility to, 1","type":"exact"}],"termid":"MONDO:0021012","xrefs":{"Monarch":{"xref_id":"0021012"}}}


id: MONDO:0004357
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma of the larynx that arises from the supraglottic area.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"supraglottis cancer","termid":"MONDO:0001724"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of supraglottis","secondary_identifiers":["MEDGEN:266243","SCTID:372105009","DOID:7763","NCIT:C5973","UMLS:C1299240"],"synonyms":[{"name":"cancer of supraglottis","type":"exact"},{"name":"cancer of the supraglottis","type":"exact"},{"name":"carcinoma of supraglottic part of larynx","type":"exact"},{"name":"carcinoma of supraglottis","type":"exact"},{"name":"carcinoma of the supraglottis","type":"exact"},{"name":"supraglottic cancer","type":"exact"},{"name":"supraglottic carcinoma","type":"exact"},{"name":"supraglottic part of larynx carcinoma","type":"exact"},{"name":"supraglottic throat cancer","type":"exact"},{"name":"supraglottis carcinoma","type":"exact"}],"termid":"MONDO:0004357","xrefs":{"Monarch":{"xref_id":"0004357"}}}


id: GO:0006592
data:
  {"annotated_genes":["SJAG_00695"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74329],"is_not":false,"summary":null,"term":"GO:0006592"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ornithine, an amino acid only rarely found in proteins, but which is important in living organisms as an intermediate in the reactions of the urea cycle and in arginine biosynthesis.","definition_xrefs":["ISBN:0192801023","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ornithine metabolic process","termid":"GO:0006591"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"},{"relation_name":"is_a","term_name":"alpha-amino acid biosynthetic process","termid":"GO:1901607"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"ornithine biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"ornithine anabolism","type":"exact"},{"name":"ornithine biosynthesis","type":"exact"},{"name":"ornithine formation","type":"exact"},{"name":"ornithine synthesis","type":"exact"}],"termid":"GO:0006592","terms_by_termid":{"GO:0006592":null}}


id: MONDO:0005926
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete poliomyelitis (obsolete MONDO:0005926)","termid":"MONDO:0005926","xrefs":{"Monarch":{"xref_id":"0005926"}}}


id: GO:0050128
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-feruloylglycine + H2O = ferulate + glycine.","definition_xrefs":["EC:3.5.1.71","RHEA:10484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016810"],"is_obsolete":false,"name":"N-feruloylglycine deacylase activity","secondary_identifiers":["KEGG_REACTION:R03579","MetaCyc:N-FERULOYLGLYCINE-DEACYLASE-RXN"],"synonyms":[{"name":"N-feruloylglycine amidohydrolase activity","type":"related"},{"name":"N-feruloylglycine hydrolase activity","type":"related"}],"termid":"GO:0050128"}


id: GO:0018351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The addition of an ester group to a cysteine residue in a protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-cysteine esterification (obsolete GO:0018351)","termid":"GO:0018351"}


id: PBO:0050469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOXA distal transcript antisense RNA","termid":"PBO:0050469"}


id: PBO:0058824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8054","termid":"PBO:0058824"}


id: GO:0048028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a simple or complex galacturonan. Galacturonan is any glycan composed solely of galacturonic acid residues, a specific type of glycuronan, and a constituent of some pectins.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide binding","termid":"GO:0030247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"galacturonan binding","synonyms":[{"name":"polygalacturonide binding","type":"related"}],"termid":"GO:0048028"}


id: GO:0071039
data:
  {"annotated_genes":["SJAG_04360","SJAG_01830","SJAG_00701","SJAG_03984","SJAG_02622","SJAG_03939","SJAG_03745","SJAG_01064"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72231,72576,101787,105008,113909,114813,117435,120188],"is_not":false,"summary":null,"term":"GO:0071039"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways occurring in the nucleus and resulting in the breakdown of a cryptic unstable transcript (CUT), initiated by the enzymatic addition of a sequence of adenylyl residues (polyadenylation) at the 3' end the target CUT.","definition_xrefs":["PMID:15935759","PMID:18007593","PMID:18591258","GOC:dgf","PMID:16973437","PMID:16973436","GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"CUT catabolic process","termid":"GO:0071034"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00701":null,"SJAG_01064":null,"SJAG_01830":null,"SJAG_02622":null,"SJAG_03745":null,"SJAG_03939":null,"SJAG_03984":null,"SJAG_04360":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear polyadenylation-dependent CUT catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nuclear poly(A)-dependent CUT catabolic process","type":"related"}],"termid":"GO:0071039","terms_by_termid":{"GO:0071039":null}}


id: PBO:0038320
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pubmed_entrez_date","termid":"PBO:0038320"}


id: GO:0140917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across an organelle membrane, into a mitochondrion.","definition_xrefs":["PMID:21289295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into mitochondrion","termid":"GO:0140917"}


id: MONDO:0002781
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paralysis of the glossopharyngeal nerve.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glossopharyngeal nerve disorder","termid":"MONDO:0002639"},{"relation_name":"is_a","term_name":"cranial nerve palsy","termid":"MONDO:0002782"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glossopharyngeal nerve paralysis","secondary_identifiers":["NCIT:C27335","UMLS:C5231192","DOID:3816","MEDGEN:1696475"],"synonyms":[{"name":"cranial nerve palsy of glossopharyngeal nerve","type":"exact"},{"name":"glossopharyngeal nerve cranial nerve palsy","type":"exact"}],"termid":"MONDO:0002781","xrefs":{"Monarch":{"xref_id":"0002781"}}}


id: PR:Q9UST3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 52 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO03406","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 52 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC336.11","secondary_identifiers":["UniProtKB:Q9UST3"],"synonyms":[{"name":"Spom972h-VPS52","type":"exact"}],"termid":"PR:Q9UST3"}


id: MONDO:0032748
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure 38","secondary_identifiers":["GARD:18409","OMIM:618433","DOID:0111919","MEDGEN:1680356","UMLS:C5193095"],"synonyms":[{"name":"SPERMATOGENIC FAILURE 38","type":"related"},{"name":"SPGF38","type":"related"}],"termid":"MONDO:0032748","xrefs":{"Monarch":{"xref_id":"0032748"}}}


id: GO:0061663
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of NEDD8 to a substrate protein via the reaction X-NEDD8 + S = X + S-NEDD8, where X is either an E2 or E3 enzyme, the X-NEDD8 linkage is a thioester bond, and the S-NEDD8 linkage is an isopeptide bond between the C-terminal amino acid of NEDD8 and the epsilon-amino group of lysine residues in the substrate.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"NEDD8 transferase activity","termid":"GO:0019788"},{"relation_name":"is_a","term_name":"ubiquitin-like protein ligase activity","termid":"GO:0061659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0019787"}],"interesting_parent_ids":["GO:0140096","GO:0019787","GO:0003824","GO:0016740","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"NEDD8 ligase activity","synonyms":[{"name":"E3","type":"broad"}],"termid":"GO:0061663"}


id: PBO:0033772
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-pointed_nucleus_during_mitotic_interphase","termid":"PBO:0033772"}


id: PBO:0060207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MUS81 structure-specific endonuclease subunit","termid":"PBO:0060207"}


id: MOD:01055
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from DeltaMass","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-nitro-2-pyridinesulfenyl","synonyms":[{"name":"Npys","type":"exact"}],"termid":"MOD:01055"}


id: PBO:0018191
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Neuromyotonia","termid":"PBO:0018191"}


id: GO:0006311
data:
  {"annotated_genes":["SJAG_02460","SJAG_02267"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91302,102568],"is_not":false,"summary":null,"term":"GO:0006311"}]},"cv_name":"biological_process","definition":"The cell cycle process in which genetic information is transferred from one helix to another. It often occurs in association with general genetic recombination events, and is believed to be a straightforward consequence of the mechanisms of general recombination and DNA repair. For example, meiosis might yield three copies of the maternal version of an allele and only one copy of the paternal allele, indicating that one of the two copies of the paternal allele has been changed to a copy of the maternal allele.","definition_xrefs":["ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"},{"relation_name":"is_a","term_name":"meiosis I cell cycle process","termid":"GO:0061982"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02267":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006259","GO:0007049","GO:0008150","GO:0006310"],"is_obsolete":false,"name":"meiotic gene conversion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"gene conversion without reciprocal crossover","type":"exact"}],"termid":"GO:0006311","terms_by_termid":{"GO:0006311":null}}


id: PBO:0051451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 5-39","termid":"PBO:0051451"}


id: GO:0050173
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-phenylalanine + ATP = N-adenylyl-L-phenylalanine + diphosphate + 2 H+.","definition_xrefs":["EC:2.7.7.54"],"gene_count":0,"genotype_count":0,"name":"obsolete phenylalanine adenylyltransferase activity (obsolete GO:0050173)","synonyms":[{"name":"ATP:L-phenylalanine adenylyltransferase activity","type":"related"},{"name":"ATP:phenylalanine adenylyltransferase activity","type":"exact"},{"name":"L-phenylalanine adenylyltransferase activity","type":"related"}],"termid":"GO:0050173"}


id: PBO:0017617
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Charcot-Marie-Tooth disease","termid":"PBO:0017617"}


id: GO:0021667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of rhombomere 6 is generated and organized. Rhombomeres are transverse segments of the developing rhombencephalon. Rhombomeres are lineage restricted, express different genes from one another, and adopt different developmental fates. Rhombomeres are numbered in an anterior to posterior order.","definition_xrefs":["GOC:jid","GOC:dph","GO_REF:0000021","GOC:cls","GOC:curators","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhombomere morphogenesis","termid":"GO:0021593"},{"relation_name":"part_of","term_name":"rhombomere 6 development","termid":"GO:0021572"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"rhombomere 6 morphogenesis","termid":"GO:0021667"}


id: PBO:0074373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMG1 nonsense mediated mRNA decay associated PI3K related kinase","termid":"PBO:0074373"}


id: MONDO:0012332
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete short stature-delayed bone age due to thyroid hormone metabolism deficiency (obsolete MONDO:0012332)","termid":"MONDO:0012332","xrefs":{"Monarch":{"xref_id":"0012332"}}}


id: PATO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality inhering in a bearer by virtue of the bearer's protruding or projecting from the body.","definition_xrefs":["sdvc:sdvc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protruding","termid":"PATO:0001598"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exserted","synonyms":[{"name":"prolapse","type":"related"},{"name":"prolapsed","type":"related"}],"termid":"PATO:0000623"}


id: PBO:0036482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arginine specific carbamoyl-phosphate synthase Arg4","termid":"PBO:0036482"}


id: PBO:0121085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APIP pseudogene 1","termid":"PBO:0121085"}


id: GO:0050889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The determination of the perceived strength of a sensory stimulus.","definition_xrefs":["ISBN:0721619908"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of stimulus intensity","termid":"GO:0050889"}


id: MONDO:0030913
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"autosomal dominant syndromic intellectual disability","termid":"MONDO:0100601"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 48","secondary_identifiers":["DOID:0080235","GARD:17924","OMIM:617751","UMLS:C4540321","MEDGEN:1619532","Orphanet:500159"],"synonyms":[{"name":"MRD48","type":"related"},{"name":"autosomal dominant intellectual disability 48","type":"related"},{"name":"autosomal dominant mental retardation 48","type":"related"},{"name":"intellectual disability, autosomal dominant 48","type":"exact"},{"name":"mental retardation, autosomal dominant 48","type":"related"},{"name":"microcephaly-corpus callosum and cerebellar vermis hypoplasia-facial dysmorphism-intellectual disability syndrom","type":"related"}],"termid":"MONDO:0030913","xrefs":{"Monarch":{"xref_id":"0030913"}}}


id: FYPO:0004834
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a phosphatase activity is increased during a cellular response to adenine starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased phosphatase activity","termid":"FYPO:0004415"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"increased phosphatase activity during cellular response to adenine starvation","synonyms":[{"name":"increased phosphatase activity during adenine starvation","type":"exact"}],"termid":"FYPO:0004834"}


id: PBO:0077927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 antisense RNA 1","termid":"PBO:0077927"}


id: PBO:0061934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily L member 6","termid":"PBO:0061934"}


id: PBO:0051317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR9-1 (pseudogene)","termid":"PBO:0051317"}


id: PBO:0064494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA polymerase I subunit G","termid":"PBO:0064494"}


id: PBO:0071834
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 29","termid":"PBO:0071834"}


id: GO:0050444
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2 cob(II)alamin + NADP+ = 2 aquacob(III)alamin + NADPH + H+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete aquacobalamin reductase (NADPH) activity (obsolete GO:0050444)","termid":"GO:0050444"}


id: GO:0035645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a smooth muscle cell of the intestine.","definition_xrefs":["CL:0002504","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"smooth muscle cell differentiation","termid":"GO:0051145"},{"relation_name":"part_of","term_name":"digestive tract development","termid":"GO:0048565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"enteric smooth muscle cell differentiation","synonyms":[{"name":"intestinal smooth muscle cell differentiation","type":"exact"}],"termid":"GO:0035645"}


id: GO:0044302
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Hippocampal mossy fiber produced by dentate gyrus granule cells.","definition_xrefs":["NIF_Subcellular:nlx_subcell_20090601","PMID:17765709"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hippocampal mossy fiber","termid":"GO:0097457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dentate gyrus mossy fiber","synonyms":[{"name":"dentate gyrus mossy fibre","type":"exact"},{"name":"granule cell axon","type":"broad"}],"termid":"GO:0044302"}


id: PBO:0005630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 2, Pre8 (predicted)","termid":"PBO:0005630"}


id: PR:O60169
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19F8.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O60169"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C19F8.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19F8.05","synonyms":[{"name":"Spom972h-SPBC19F8.05","type":"exact"}],"termid":"PR:O60169"}


id: MONDO:0019224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An inherited metabolic disease that is has its basis in the disruption of gamma-aminobutyric acid metabolic process.","definition_xrefs":["MONDO:patterns/inborn_metabolic"],"gene_count":0,"genotype_count":0,"name":"obsolete inborn disorder of gamma-aminobutyric acid metabolism (obsolete MONDO:0019224)","synonyms":[{"name":"disorder of GABA metabolism","type":"exact"},{"name":"disorder of gamma-aminobutyric acid metabolism","type":"related"},{"name":"inborn error of gamma-aminobutyric acid metabolic process","type":"exact"},{"name":"inborn gamma-aminobutyric acid metabolic process disorder","type":"exact"},{"name":"rare inborn error of gamma-aminobutyric acid metabolic process","type":"exact"}],"termid":"MONDO:0019224","xrefs":{"Monarch":{"xref_id":"0019224"}}}


id: PBO:0069691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 970, pseudogene","termid":"PBO:0069691"}


id: FYPO:0004397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype observed in the vegetative growth phase of the life cycle in which the export of protein from the nucleus is normal (i.e. indistinguishable from wild type). Export of all proteins or a specific protein may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal nuclear export","termid":"FYPO:0000509"},{"relation_name":"is_a","term_name":"normal intracellular protein transport during vegetative growth","termid":"FYPO:0005397"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001312","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein export from nucleus during vegetative growth","synonyms":[{"name":"normal nucleocytoplasmic protein export during vegetative growth","type":"related"},{"name":"normal protein export from nucleus during mitotic cell cycle","type":"related"}],"termid":"FYPO:0004397"}


id: MONDO:0001658
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sporadic enlargement of the thyroid gland that is not associated with changes in thyroid function or malignancy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"goiter","termid":"MONDO:0005397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nontoxic goiter","secondary_identifiers":["DOID:13195","MEDGEN:113172","NCIT:C35271","SCTID:267369002","UMLS:C0221777"],"synonyms":[{"name":"Nodule-thyroid, non tox","type":"exact"},{"name":"euthyroid goiter","type":"exact"},{"name":"euthyroid goitre","type":"exact"},{"name":"goiter, non-toxic","type":"exact"},{"name":"non-toxic goiter","type":"exact"},{"name":"non-toxic goitre","type":"exact"},{"name":"non-toxic simple goiter","type":"exact"},{"name":"non-toxic simple goitre","type":"exact"},{"name":"nontoxic goiter","type":"exact"}],"termid":"MONDO:0001658","xrefs":{"Monarch":{"xref_id":"0001658"}}}


id: MONDO:0957815
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmental delay with or without epilepsy","secondary_identifiers":["OMIM:620540","UMLS:C5882702","MEDGEN:1848555"],"termid":"MONDO:0957815","xrefs":{"Monarch":{"xref_id":"0957815"}}}


id: PBO:0063266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 12","termid":"PBO:0063266"}


id: PBO:0069528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 797, pseudogene","termid":"PBO:0069528"}


id: MONDO:0976233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with progressive spasticity and brain abnormalities","secondary_identifiers":["OMIM:621102"],"termid":"MONDO:0976233","xrefs":{"Monarch":{"xref_id":"0976233"}}}


id: PBO:0018000
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA repair endonuclease non-catalytic subunit Swi10","termid":"PBO:0018000"}


id: GO:0046653
data:
  {"annotated_genes":["SJAG_03275","SJAG_00106","SJAG_03712","SJAG_01466","SJAG_03914","SJAG_01198","SJAG_01126","SJAG_01616","SJAG_01766","SJAG_00815","SJAG_02408","SJAG_04156","SJAG_02225"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110386,114469],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"},{"annotations":[57452,81731,108113,61509,73027],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046654"},{"annotations":[61947,72868,77650,73804,78536,106814,74513,60314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving tetrahydrofolate, 5,6,7,8-tetrahydrofolic acid, a folate derivative bearing additional hydrogens on the pterin group.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"folic acid-containing compound metabolic process","termid":"GO:0006760"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_00815":null,"SJAG_01126":null,"SJAG_01198":null,"SJAG_01466":null,"SJAG_01616":null,"SJAG_01766":null,"SJAG_02225":null,"SJAG_02408":null,"SJAG_03275":null,"SJAG_03712":null,"SJAG_03914":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tetrahydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"tetrahydrofolate metabolism","type":"exact"}],"termid":"GO:0046653","terms_by_termid":{"GO:0009257":null,"GO:0035999":null,"GO:0046654":null}}


id: MONDO:0013074
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare neoplastic syndrome characterized by the presence of unilateral lipomas of the cranium, face and neck, and ipsilateral cerebral malformations.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipomatosis","termid":"MONDO:0006574"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"encephalocraniocutaneous lipomatosis","secondary_identifiers":["Orphanet:2396","icd11.foundation:1084215843","ICD9:757.8","OMIM:613001","MESH:C535736","NCIT:C4701","GARD:2108","SCTID:238905009","MEDGEN:140807","UMLS:C0406612"],"synonyms":[{"name":"ECCL","type":"exact"},{"name":"Fishman syndrome","type":"exact"},{"name":"Haberland syndrome","type":"exact"},{"name":"encephalocraniocutaneous lipomatosis","type":"exact"},{"name":"encephalocraniocutaneous lipomatosis, somatic mosaic","type":"exact"}],"termid":"MONDO:0013074","xrefs":{"Monarch":{"xref_id":"0013074"}}}


id: PBO:0027479
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_cell_with_mitotic_G2/M_transition_delay_and_cell_cycle_arrest_in_M_phase","termid":"PBO:0027479"}


id: GO:2000725
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of striated muscle cell differentiation","termid":"GO:0051153"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"cardiac muscle cell differentiation","termid":"GO:0055007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle cell differentiation","synonyms":[{"name":"regulation of cardiomyocyte differentiation","type":"exact"},{"name":"regulation of heart muscle cell differentiation","type":"related"}],"termid":"GO:2000725"}


id: PR:P78953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mid1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78953"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"division mal foutue 1 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC4B3.15","synonyms":[{"name":"Spom972h-mid1","type":"exact"}],"termid":"PR:P78953"}


id: FYECO:0000212
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which ethanol was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ ethanol","termid":"FYECO:0000212"}


id: PATO:0002278
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's participating in a joint with another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in contact with","termid":"PATO:0001961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"articulated with","termid":"PATO:0002278"}


id: PBO:0042210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin J pseudogene 1","termid":"PBO:0042210"}


id: FYPO:0004126
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which trimethylation of lysine at position 4 of histone H3 does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished histone H3-K4 methylation during vegetative growth","termid":"FYPO:0002917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abolished histone H3-K4 trimethylation during vegetative growth","synonyms":[{"name":"abolished histone H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"abolished histone H3-K4 trimethylation during mitotic cell cycle","type":"related"},{"name":"abolished histone H3K4me3 during vegetative growth","type":"exact"},{"name":"abolished histone lysine H3 K4 trimethylation during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation abolished during vegetative growth","type":"exact"},{"name":"histone H3-K4 trimethylation absent during vegetative growth","type":"exact"}],"termid":"FYPO:0004126"}


id: GO:0048681
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of axon regeneration.","definition_xrefs":["GOC:jid","GOC:dph","GOC:dgh","GOC:lm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to external stimulus","termid":"GO:0032102"},{"relation_name":"is_a","term_name":"regulation of axon regeneration","termid":"GO:0048679"},{"relation_name":"is_a","term_name":"negative regulation of neuron projection regeneration","termid":"GO:0070571"},{"relation_name":"is_a","term_name":"negative regulation of response to wounding","termid":"GO:1903035"},{"relation_name":"negatively_regulates","term_name":"axon regeneration","termid":"GO:0031103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of axon regeneration","synonyms":[{"name":"down regulation of axon regeneration","type":"exact"},{"name":"down-regulation of axon regeneration","type":"exact"},{"name":"downregulation of axon regeneration","type":"exact"},{"name":"inhibition of axon regeneration","type":"narrow"}],"termid":"GO:0048681"}


id: GO:0042985
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of amyloid precursor protein (APP), the precursor of amyloid-beta.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of glycoprotein biosynthetic process","termid":"GO:0010561"},{"relation_name":"is_a","term_name":"regulation of amyloid precursor protein biosynthetic process","termid":"GO:0042984"},{"relation_name":"negatively_regulates","term_name":"amyloid precursor protein biosynthetic process","termid":"GO:0042983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid precursor protein biosynthetic process","synonyms":[{"name":"down regulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"down-regulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"downregulation of amyloid precursor protein biosynthetic process","type":"exact"},{"name":"inhibition of amyloid precursor protein biosynthetic process","type":"narrow"},{"name":"negative regulation of APP biosynthesis","type":"exact"},{"name":"negative regulation of APP biosynthetic process","type":"exact"},{"name":"negative regulation of amyloid precursor protein anabolism","type":"exact"},{"name":"negative regulation of amyloid precursor protein biosynthesis","type":"exact"},{"name":"negative regulation of amyloid precursor protein formation","type":"exact"},{"name":"negative regulation of amyloid precursor protein synthesis","type":"exact"}],"termid":"GO:0042985"}


id: PBO:0001525
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF2009 protein","termid":"PBO:0001525"}


id: MONDO:0700194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphoma that occurs in a chicken.","definition_xrefs":["NCIT:C135004"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"},{"relation_name":"is_a","term_name":"chicken neoplasm","termid":"MONDO:0700189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chicken lymphoma","termid":"MONDO:0700194","xrefs":{"Monarch":{"xref_id":"0700194"}}}


id: GO:1901821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-zeacarotene.","definition_xrefs":["UniPathway:UPA00804","GOC:TermGenie","GOC:yaf","PMID:6060456"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"},{"relation_name":"is_a","term_name":"alpha-zeacarotene metabolic process","termid":"GO:1901819"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"alpha-zeacarotene biosynthetic process","synonyms":[{"name":"alpha-zeacarotene anabolism","type":"exact"},{"name":"alpha-zeacarotene biosynthesis","type":"exact"},{"name":"alpha-zeacarotene formation","type":"exact"},{"name":"alpha-zeacarotene synthesis","type":"exact"}],"termid":"GO:1901821"}


id: PR:Q9Y7L7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phosphatidylinositol N-acetylglucosaminyltransferase subunit H that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR15231:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol N-acetylglucosaminyltransferase subunit gpi15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC685.05","secondary_identifiers":["UniProtKB:Q9Y7L7"],"synonyms":[{"name":"PIGH homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC685.05","type":"related"},{"name":"Spom972h-PIGH","type":"exact"}],"termid":"PR:Q9Y7L7"}


id: MONDO:0003924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that can arise from any of the adrenal cortical layers. It can be associated with the overproduction of glucocorticoids (Cushing's syndrome), androgenic or estrogenic steroids (adrenogenital syndrome), or mineralocorticoids (Conn's syndrome). (Sternberg Diagnostic Surgical Pathology, 3rd ed.)","definition_xrefs":["NCIT:C9003"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"benign neoplasm of adrenal gland","termid":"MONDO:0021511"},{"relation_name":"is_a","term_name":"adrenal cortex neoplasm","termid":"MONDO:0036591"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenal cortex adenoma","secondary_identifiers":["HP:0008256","MEDGEN:61654","HP:0008196","ONCOTREE:ACA","SCTID:302826002","MESH:D018246","NANDO:2200352","DOID:656","ICDO:8370/0","Orphanet:99888","UMLS:C0206667","MONDO:0005248","DOID:0050891","EFO:0003104"],"synonyms":[{"name":"adenoma of adrenal cortex","type":"exact"},{"name":"adenoma of adrenal gland","type":"exact"},{"name":"adenoma of the adrenal cortex","type":"exact"},{"name":"adenoma of the adrenal gland","type":"exact"},{"name":"adenoma, adrenocortical, benign","type":"exact"},{"name":"adrenal adenoma","type":"exact"},{"name":"adrenal cortex adenoma","type":"exact"},{"name":"adrenal cortical adenoma","type":"exact"},{"name":"adrenal gland adenoma","type":"exact"},{"name":"adrenal incidentaloma","type":"related"},{"name":"adrenocortical adenoma","type":"exact"},{"name":"benign adenoma of adrenal gland","type":"exact"},{"name":"benign adenoma of the adrenal gland","type":"exact"},{"name":"benign adrenal adenoma","type":"exact"},{"name":"benign adrenal gland adenoma","type":"exact"},{"name":"cortical cell adenoma","type":"exact"}],"termid":"MONDO:0003924","xrefs":{"Monarch":{"xref_id":"0003924"}}}


id: PBO:0070457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L4","termid":"PBO:0070457"}


id: MOD:00528
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a carbohydrate-like group composed of Hex1HexNAc1NeuAc2 linked through a glycosidic bond.","definition_xrefs":["Unimod:160"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc2 glycosylated residue","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(2)","type":"related"},{"name":"Hex1HexNAc1NeuAc2","type":"related"}],"termid":"MOD:00528"}


id: MONDO:0044723
data:
  {"annotated_genes":["SJAG_00737","SJAG_03258"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89005,89006],"is_not":false,"summary":null,"term":"MONDO:0044723"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00737":null,"SJAG_03258":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 8","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:934617","DOID:0070000","OMIM:617248","GARD:22050","Orphanet:505208","UMLS:C4310650"],"synonyms":[{"name":"3-Methylglutaconic aciduria, type 8","type":"related"},{"name":"3-methylglutaconic aciduria type VIII","type":"related"},{"name":"3-methylglutaconic aciduria type VIII, MGCA8","type":"exact"},{"name":"3-methylglutaconic aciduria, type VIII","type":"exact"},{"name":"3-methylglutaconic aciduria, type VIII; MGCA8","type":"exact"},{"name":"MGA8","type":"exact"},{"name":"MGCA8","type":"exact"}],"termid":"MONDO:0044723","terms_by_termid":{"MONDO:0044723":null},"xrefs":{"Monarch":{"xref_id":"0044723"}}}


id: SO:0000117
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000117 transcript_with_readthrough_stop_codon (obsolete SO:0000117)","termid":"SO:0000117"}


id: PBO:0120892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coat protein complex I subunit beta 1","termid":"PBO:0120892"}


id: SO:0001046
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Component of the inversion site located at the left of a region susceptible to site-specific inversion.","definition_xrefs":["Phigo:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inversion_site_part","termid":"SO:0001048"},{"relation_name":"part_of","term_name":"inversion_site","termid":"SO:0000948"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IRLinv_site","synonyms":[{"name":"IRLinv site","type":"exact"}],"termid":"SO:0001046"}


id: MONDO:0006657
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apparent mineralocorticoid excess syndrome (obsolete MONDO:0006657)","secondary_identifiers":["NANDO:2200362","NANDO:2100130"],"termid":"MONDO:0006657","xrefs":{"Monarch":{"xref_id":"0006657"}}}


id: PBO:0029085
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_clotrimazole","termid":"PBO:0029085"}


id: PR:O94715
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rps1501 gene.","definition_xrefs":["UniProtKB:O94715","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S15-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1393.03","synonyms":[{"name":"Spom972h-rps1501","type":"exact"}],"termid":"PR:O94715"}


id: PBO:0081006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 43","termid":"PBO:0081006"}


id: PBO:0078515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM7 antisense RNA 1","termid":"PBO:0078515"}


id: SO:0000723
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic sequence removed from the genome, as a normal event, by a process of recombination.","definition_xrefs":["SO:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"recombination_feature","termid":"SO:0000298"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iDNA","synonyms":[{"name":"INSDC_feature:iDNA","type":"exact"},{"name":"intervening DNA","type":"exact"}],"termid":"SO:0000723"}


id: PBO:0031707
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_recombination","termid":"PBO:0031707"}


id: PBO:0049819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase 10","termid":"PBO:0049819"}


id: MONDO:0054817
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"leukodystrophy, hypomyelinating, 17","secondary_identifiers":["UMLS:C4693912","MEDGEN:1644557","DOID:0070404","OMIM:618006"],"synonyms":[{"name":"HLD17","type":"related"},{"name":"leukodystrophy, hypomyelinating, 17","type":"exact"}],"termid":"MONDO:0054817","xrefs":{"Monarch":{"xref_id":"0054817"}}}


id: PBO:0004146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ric8 family guanine nulceotide exchange factor synembryn family","termid":"PBO:0004146"}


id: PR:Q10097
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC11D3.18c gene.","definition_xrefs":["UniProtKB:Q10097","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transporter C11D3.18C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11D3.18c","synonyms":[{"name":"Spom972h-SPAC11D3.18c","type":"exact"}],"termid":"PR:Q10097"}


id: PR:Q9USS8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC4.02c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USS8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C4.02c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4.02c","synonyms":[{"name":"Spom972h-SPBC4.02c","type":"exact"}],"termid":"PR:Q9USS8"}


id: PBO:0055042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2457","termid":"PBO:0055042"}


id: SO:1000036
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A continuous nucleotide sequence is inverted in the same position.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_alteration","termid":"SO:0001059"},{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inversion","secondary_identifiers":["loinc:LA6689-9"],"synonyms":[{"name":"inversion","type":"exact"}],"termid":"SO:1000036"}


id: PBO:0001637
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A","termid":"PBO:0001637"}


id: PBO:0034332
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-2D_boundary_of","termid":"PBO:0034332"}


id: GO:0097194
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A stage of the apoptotic process that starts with the controlled breakdown of the cell through the action of effector caspases or other effector molecules (e.g. cathepsins, calpains etc.). Key steps of the execution phase are rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies. When the execution phase is completed, the cell has died.","definition_xrefs":["PMID:21760595","GOC:mtg_apoptosis"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"},{"relation_name":"part_of","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"execution phase of apoptosis","secondary_identifiers":["Reactome:R-HSA-75153"],"synonyms":[{"name":"apoptosis","type":"narrow"},{"name":"execution phase of apoptotic process","type":"exact"}],"termid":"GO:0097194"}


id: PATO:0001323
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 2-D extent quality inhering in a bearer by virtue of the bearer's two dimensional extent.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Area"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-D extent","termid":"PATO:0001709"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"area","termid":"PATO:0001323"}


id: PBO:0067250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 323, pseudogene","termid":"PBO:0067250"}


id: PBO:0059663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO1 pseudogene 29","termid":"PBO:0059663"}


id: PBO:0067166
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 219, pseudogene","termid":"PBO:0067166"}


id: GO:0044683
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the overall reaction: methyl-Co(III) methylated-thiol-specific corrinoid protein + coenzyme M = Co(I) methylated--thiol-specific corrinoid protein + methyl-CoM.","definition_xrefs":["PMID:9371433","MetaCyc:RXN-8125"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"methylthiol:coenzyme M methyltransferase activity","secondary_identifiers":["RHEA:32667","EC:2.1.1.251"],"synonyms":[{"name":"methylthiol:coenzyme M methyl transferase activity","type":"exact"}],"termid":"GO:0044683"}


id: PATO:0000791
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000791 immune function value (obsolete PATO:0000791)","termid":"PATO:0000791"}


id: MONDO:0001632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vascular diseases characterized by thickening and hardening of the walls of arteries inside the skull. There are three subtypes: (1) atherosclerosis with fatty deposits in the arterial intima; (2) Monckeberg's sclerosis with calcium deposits in the media and (3) arteriolosclerosis involving the small caliber arteries. Clinical signs include headache; confusion; transient blindness (amaurosis fugax); speech impairment; and hemiparesis.","definition_xrefs":["MESH:D002537"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteriosclerosis disorder","termid":"MONDO:0002277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intracranial arteriosclerosis","secondary_identifiers":["MEDGEN:3319","DOID:13097","UMLS:C0007771"],"termid":"MONDO:0001632","xrefs":{"Monarch":{"xref_id":"0001632"}}}


id: GO:0120027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of osmosensory signaling pathway.","definition_xrefs":["GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of osmosensory signaling pathway (obsolete GO:0120027)","termid":"GO:0120027"}


id: PBO:0067069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 97, pseudogene","termid":"PBO:0067069"}


id: PBO:0089515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA (guanine-N7-)-methyltransferase Bud23","termid":"PBO:0089515"}


id: PBO:0112868
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosine deaminase Fcy1","termid":"PBO:0112868"}


id: GO:1902696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glycine to isobutanol.","definition_xrefs":["GO_REF:0000093","GOC:TermGenie","PMID:23642236","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine catabolic process","termid":"GO:0006546"},{"relation_name":"is_a","term_name":"isobutanol metabolic process","termid":"GO:1901960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"glycine catabolic process to isobutanol","secondary_identifiers":["GO:1990293"],"synonyms":[{"name":"glycine breakdown to isobutanol","type":"exact"},{"name":"glycine catabolism to isobutanol","type":"exact"},{"name":"glycine degradation to isobutanol","type":"exact"}],"termid":"GO:1902696"}


id: MONDO:0031230
data:
  {"annotated_genes":["SJAG_07005","SJAG_02398","SJAG_01671","SJAG_00260"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87563],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030935"},{"annotations":[87564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030937"},{"annotations":[87536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030974"},{"annotations":[88182],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100294"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn mitochondrial myopathy","termid":"MONDO:0009637"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01671":null,"SJAG_02398":null,"SJAG_07005":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex II deficiency, nuclear type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:252011"],"termid":"MONDO:0031230","terms_by_termid":{"MONDO:0030935":null,"MONDO:0030937":null,"MONDO:0030974":null,"MONDO:0100294":null},"xrefs":{"Monarch":{"xref_id":"0031230"}}}


id: FYPO:0006750
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of one or more transfer RNA precursor(s) (pre-tRNA) measured in a cell that is subject to nitrogen starvation is normal (i.e. indistinguishable from wild type). Total pre-tRNA or a specific pre-tRNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal RNA level during nitrogen starvation","termid":"FYPO:0001096"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal pre-tRNA level during nitrogen starvation","synonyms":[{"name":"normal pre-tRNA accumulation during nitrogen starvation","type":"related"},{"name":"normal pre-tRNA level during nitrogen depletion","type":"exact"},{"name":"normal pre-tRNA level during nitrogen deprivation","type":"exact"},{"name":"normal pre-tRNA transcript level during nitrogen starvation","type":"exact"},{"name":"normal tRNA level during nitrogen starvation","type":"broad"},{"name":"normal tRNA primary transcript level during nitrogen starvation","type":"exact"},{"name":"normal transfer RNA precursor level during nitrogen starvation","type":"exact"}],"termid":"FYPO:0006750"}


id: PBO:0067019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 32, pseudogene","termid":"PBO:0067019"}


id: MONDO:0010370
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89036],"is_not":false,"summary":null,"term":"MONDO:0010370"}]},"cv_name":"mondo","definition":"An X-linked inherited form of Cornelia De Lange syndrome caused by mutations in the SMC1A gene mapped to chromosome Xp11.22. Patients have a milder form of the syndrome compared to patients with the NIPBL gene mutation.","definition_xrefs":["NCIT:C75485"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cornelia de Lange syndrome","termid":"MONDO:0016033"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"is_obsolete":false,"name":"Cornelia de Lange syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:315658","OMIM:300590","UMLS:C1802395","DOID:0080506","GARD:15259"],"synonyms":[{"name":"CDLS2","type":"related"},{"name":"Cdls, X-linked","type":"related"},{"name":"Cornelia DE Lange syndrome 2","type":"related"},{"name":"Cornelia De Lange syndrome type 2","type":"exact"},{"name":"Cornelia De Lange syndrome, X-linked","type":"related"},{"name":"Cornelia de Lange syndrome 2","type":"exact"},{"name":"Cornelia de Lange syndrome 2, X-linked dominant","type":"exact"},{"name":"Cornelia de Lange syndrome caused by mutation in SMC1A","type":"exact"},{"name":"SMC1A Cornelia de Lange syndrome","type":"exact"},{"name":"X-linked Cornelia De Lange syndrome","type":"exact"}],"termid":"MONDO:0010370","terms_by_termid":{"MONDO:0010370":null},"xrefs":{"Monarch":{"xref_id":"0010370"}}}


id: GO:0097265
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-HETE + NADP+ = 5-oxo-ETE + NADPH + H+.","definition_xrefs":["PMID:1326548","GOC:mw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"5(S)-hydroxyeicosatetraenoic acid dehydrogenase activity","secondary_identifiers":["Reactome:R-HSA-2161776"],"synonyms":[{"name":"5(S)-HETE dehydrogenase activity","type":"exact"},{"name":"5-HETE dehydrogenase activity","type":"exact"},{"name":"5-hydroxy-eicosatetraenoic acid dehydrogenase activity","type":"exact"}],"termid":"GO:0097265"}


id: GO:1990739
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of granulosa cells, resulting in the expansion of the granulosa cells population. A granulosa cell is a supporting cell for the developing female gamete in the ovary of mammals. They develop from the coelomic epithelial cells of the gonadal ridge.","definition_xrefs":["PMID:22383759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation","termid":"GO:0050673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"granulosa cell proliferation","termid":"GO:1990739"}


id: GO:0008110
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + L-histidine = 3-(imidazol-5-yl)pyruvate + L-glutamate.","definition_xrefs":["RHEA:16565","EC:2.6.1.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0016769","GO:0003824"],"is_obsolete":false,"name":"L-histidine:2-oxoglutarate aminotransferase activity","secondary_identifiers":["KEGG_REACTION:R01161","MetaCyc:HISTTRANSAM-RXN"],"synonyms":[{"name":"histidine aminotransferase activity","type":"broad"},{"name":"histidine transaminase activity","type":"broad"},{"name":"histidine-2-oxoglutarate aminotransferase activity","type":"related"}],"termid":"GO:0008110"}


id: GO:0019263
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of adamantanone, tricyclo(3.3.1.13,7)decanone, a white crystalline solid used as an intermediate for microelectronics in the production of photoresists.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"},{"relation_name":"is_a","term_name":"ketone catabolic process","termid":"GO:0042182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"adamantanone catabolic process","secondary_identifiers":["MetaCyc:P481-PWY"],"synonyms":[{"name":"adamantanone breakdown","type":"exact"},{"name":"adamantanone catabolism","type":"exact"},{"name":"adamantanone degradation","type":"exact"}],"termid":"GO:0019263"}


id: PBO:0059903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 26","termid":"PBO:0059903"}


id: MONDO:0018351
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete adenocarcinoma of penis (obsolete MONDO:0018351)","termid":"MONDO:0018351","xrefs":{"Monarch":{"xref_id":"0018351"}}}


id: PBO:0057250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 451a","termid":"PBO:0057250"}


id: GO:0015769
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of melibiose into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Melibiose is the disaccharide 6-O-alpha-D-galactopyranosyl-D-glucose.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide transport","termid":"GO:0015766"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"melibiose transport","termid":"GO:0015769"}


id: FYPO:0001310
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable after entering stationary phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal viability in stationary phase","synonyms":[{"name":"normal cell population viability in stationary phase","type":"exact"},{"name":"normal chronological cell aging","type":"related"},{"name":"normal chronological lifespan","type":"related"}],"termid":"FYPO:0001310"}


id: PBO:0051904
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 11","termid":"PBO:0051904"}


id: MONDO:0011256
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"emphysema, congenital, with deafness, penoscrotal web, and intellectual disability","secondary_identifiers":["MESH:C566519","MEDGEN:355926","UMLS:C1865180","OMIM:602564"],"synonyms":[{"name":"emphysema, congenital, with deafness, penoscrotal web, and intellectual disability","type":"exact"},{"name":"emphysema, congenital, with deafness, penoscrotal web, and mental retardation","type":"exact"}],"termid":"MONDO:0011256","xrefs":{"Monarch":{"xref_id":"0011256"}}}


id: PBO:0066383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RDX pseudogene 3","termid":"PBO:0066383"}


id: PBO:0057252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 452","termid":"PBO:0057252"}


id: GO:0060504
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate or frequency of epithelial cell proliferation that results in the lung bud increasing in size radially.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental growth","termid":"GO:0048639"},{"relation_name":"is_a","term_name":"positive regulation of epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060501"},{"relation_name":"is_a","term_name":"positive regulation of branching involved in lung morphogenesis","termid":"GO:0061047"},{"relation_name":"positively_regulates","term_name":"epithelial cell proliferation involved in lung bud dilation","termid":"GO:0060505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of epithelial cell proliferation involved in lung bud dilation","termid":"GO:0060504"}


id: MONDO:0008741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PAGOD syndrome is a severe developmental syndrome characterized by multiple congenital anomalies including cardiovascular defects, pulmonary hypoplasia, diaphragmatic defects and genital anomalies.","definition_xrefs":["Orphanet:991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGOD syndrome","secondary_identifiers":["SCTID:722132007","MESH:C537018","MEDGEN:347985","GARD:3086","OMIM:202660","UMLS:C1859967"],"synonyms":[{"name":"Kennerknecht sorgo Oberhoffer syndrome","type":"related"},{"name":"PAGOD syndrome","type":"exact"},{"name":"agonadism with multiple internal malformations","type":"related"},{"name":"pulmonary hypoplasia, hypoplasia of the pulmonary artery, agonadism, omphalocele-diaphragmatic defect, and dextrocardia","type":"related"},{"name":"pulmonary hypoplasia-agonadism-dextrocardia-diaphragmatic hernia syndrome","type":"exact"}],"termid":"MONDO:0008741","xrefs":{"Monarch":{"xref_id":"0008741"}}}


id: PBO:0089173
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch RNA-binding protein, involved in splicing","termid":"PBO:0089173"}


id: GO:0035103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The proteolytic release of a transcriptionally active sterol regulatory element binding protein (SREBP) from intracellular membranes, freeing it to move to the nucleus to upregulate transcription of target genes, in response to altered levels of one or more lipids.","definition_xrefs":["GOC:vw","PMID:12923525","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete sterol regulatory element binding protein cleavage (obsolete GO:0035103)","synonyms":[{"name":"SREBP cleavage","type":"exact"},{"name":"sterol depletion response, SREBP cleavage","type":"exact"},{"name":"sterol regulatory element binding protein cleavage involved in ER-nuclear sterol response pathway","type":"narrow"}],"termid":"GO:0035103"}


id: PBO:0052514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 28","termid":"PBO:0052514"}


id: MONDO:0021633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytoma that arises from the cerebral hemispheres.","definition_xrefs":["NCIT:C4951"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of cerebral hemisphere","termid":"MONDO:0021374"},{"relation_name":"is_a","term_name":"brain astrocytoma","termid":"MONDO:0021631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebral astrocytoma","secondary_identifiers":["MEDGEN:196691","SCTID:99131000119108","UMLS:C0750935"],"synonyms":[{"name":"astrocytoma (excluding glioblastoma) of cerebral hemisphere","type":"exact"},{"name":"astrocytoma of cerebral hemispheres","type":"exact"},{"name":"astrocytoma of cerebrum","type":"exact"},{"name":"astrocytoma of the cerebral hemispheres","type":"exact"},{"name":"astrocytoma of the cerebrum","type":"exact"},{"name":"cerebral astrocytoma","type":"exact"},{"name":"cerebral hemisphere astrocytoma (excluding glioblastoma)","type":"exact"},{"name":"cerebral hemispheric astrocytoma","type":"exact"}],"termid":"MONDO:0021633","xrefs":{"Monarch":{"xref_id":"0021633"}}}


id: PBO:0051927
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB8 antisense RNA 1","termid":"PBO:0051927"}


id: PBO:0015670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyoxylase III Hsp3106","termid":"PBO:0015670"}


id: PBO:0025450
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human GNB2L1","termid":"PBO:0025450"}


id: GO:0039596
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any viral process that modulates the frequency, rate or extent of dephosphorylation of a host protein.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein dephosphorylation (obsolete GO:0039596)","termid":"GO:0039596"}


id: MONDO:0002046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The use of alcoholic beverages to excess, either on individual occasions (\\\"binge drinking\\\") or as a regular practice.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"},{"relation_name":"is_a","term_name":"alcohol-related disorders","termid":"MONDO:0021698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol abuse","secondary_identifiers":["ICD9:305.0","MEDGEN:39339","ICD10CM:F10.1","MESH:D000437","SCTID:15167005","DOID:1574","UMLS:C0085762","ICD9:305.00"],"synonyms":[{"name":"abuse, alcohol","type":"related"},{"name":"addiction, alcohol","type":"related"},{"name":"alcohol abuse","type":"exact"},{"name":"alcohol addiction","type":"related"},{"name":"alcohol dependence","type":"related"},{"name":"alcohol use disorder","type":"related"},{"name":"alcoholic intoxication, chronic","type":"related"},{"name":"alcoholism","type":"related"},{"name":"chronic alcoholic intoxication","type":"related"},{"name":"dependence, alcohol","type":"related"},{"name":"ethanol abuse","type":"exact"},{"name":"intoxication, chronic alcoholic","type":"related"}],"termid":"MONDO:0002046","xrefs":{"Monarch":{"xref_id":"0002046"}}}


id: GO:0014016
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a neuroblast. There are at least four stages through which the pluripotent cells of epiblast or blastula become neuroblasts.","definition_xrefs":["ISBN:0878932585","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"generation of neurons","termid":"GO:0048699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuroblast differentiation","termid":"GO:0014016"}


id: PBO:0113450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of CPF cleavage and polyadenylation factor and E3 Ub-ligase; detects polyadenylation signal in nascent pre-mRNA and triggers 3' end formation of mRNA via cleavage and polyadenylation; binds pre-mRNA via zinc knuckle and RING finger; E3 ubiquitin ligase involved in polyubiquitination of endonuclease Ysh1p; contains a ubiquitin-like (UBL) domain, a RNA-binding zinc knuckle motif and a RING finger domain; relocalizes to cytosol in response to hypoxia; homolog of human RBBP6","termid":"PBO:0113450"}


id: MONDO:0014516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microcephaly and chorioretinopathy in which the cause of the disease is a mutation in the PLK4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microcephaly and chorioretinopathy","termid":"MONDO:0000181"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0700092","MONDO:0005328"],"is_obsolete":false,"name":"microcephaly and chorioretinopathy 2","secondary_identifiers":["DOID:0080106","UMLS:C4015388","MEDGEN:863825","OMIM:616171"],"synonyms":[{"name":"MCCRP2","type":"related"},{"name":"PLK4 microcephaly and chorioretinopathy","type":"exact"},{"name":"microcephaly and chorioretinopathy caused by mutation in PLK4","type":"exact"},{"name":"microcephaly and chorioretinopathy type 2","type":"exact"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, 2","type":"related"},{"name":"microcephaly and chorioretinopathy, autosomal recessive, type 2","type":"exact"}],"termid":"MONDO:0014516","xrefs":{"Monarch":{"xref_id":"0014516"}}}


id: GO:0098884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A receptor-mediated endocytosis process that results in the internalization of a neurotransmitter receptor from the postsynaptic membrane endocytic zone into an endocytic vesicle.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of postsynaptic membrane neurotransmitter receptor levels","termid":"GO:0099072"},{"relation_name":"is_a","term_name":"neurotransmitter receptor internalization","termid":"GO:0099590"},{"relation_name":"is_a","term_name":"postsynaptic endocytosis","termid":"GO:0140239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0051179","GO:0016192","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"postsynaptic neurotransmitter receptor internalization","synonyms":[{"name":"postsynaptic neurotransmitter receptor endocytosis","type":"exact"}],"termid":"GO:0098884"}


id: SO:0000559
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration including more than one D-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"D_gene_segment","termid":"SO:0000458"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","termid":"SO:0000482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"D_cluster","synonyms":[{"name":"D cluster","type":"exact"},{"name":"D-CLUSTER","type":"exact"}],"termid":"SO:0000559"}


id: MONDO:0032846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteogenesis imperfecta","termid":"MONDO:0019019"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"osteogenesis imperfecta, type 20","secondary_identifiers":["UMLS:C5231439","DOID:0111849","MEDGEN:1684751","OMIM:618644"],"synonyms":[{"name":"OI20","type":"related"},{"name":"OSTEOGENESIS IMPERFECTA, TYPE XX","type":"related"}],"termid":"MONDO:0032846","xrefs":{"Monarch":{"xref_id":"0032846"}}}


id: MONDO:0800119
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An irreversible obstructive lung disease characterized by subepithelial inflammation and fibrotic narrowing of the bronchioles after lower respiratory tract infection during childhood, especially early childhood. Although diagnosis of PIBO should be confirmed by histopathology, it is generally based on history and clinical findings. Irreversible airway obstruction is demonstrated by decreased forced expiratory volume in 1 second with an absent bronchodilator response, and by mosaic perfusion, air trapping, and/or bronchiectasis on computed tomography images. However, lung function tests using spirometry are not feasible in young children, and most cases of PIBO develop during early childhood.","definition_xrefs":["PMID:26770220"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bronchiolitis","termid":"MONDO:0002465"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postinfectious bronchiolitis obliterans","secondary_identifiers":["MEDGEN:1840786","UMLS:C5830150"],"synonyms":[{"name":"PIBO","type":"exact"}],"termid":"MONDO:0800119","xrefs":{"Monarch":{"xref_id":"0800119"}}}


id: PBO:0067715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal 13","termid":"PBO:0067715"}


id: MONDO:0033853
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cataract-severe neonatal hepatopathy-global developmental delay syndrome","secondary_identifiers":["UMLS:C5681444","GARD:22144","Orphanet:521432","MEDGEN:1814478"],"termid":"MONDO:0033853","xrefs":{"Monarch":{"xref_id":"0033853"}}}


id: PBO:0078960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ser (anticodon AGA) 2-3","termid":"PBO:0078960"}


id: GO:0031989
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by a bombesin binding to its receptor, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"bombesin receptor signaling pathway","synonyms":[{"name":"bombesin receptor signalling pathway","type":"exact"}],"termid":"GO:0031989"}


id: GO:0036314
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a sterol stimulus.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to lipid","termid":"GO:0033993"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to sterol","termid":"GO:0036314"}


id: GO:0000948
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving the catabolism of amino acids to produce carboxylic acids with one carbon less than the starting amino acid. In S. cerevisiae, this is known to occur for leucine, isoleucine, valine, methionine, phenylalanine, tyrosine, or tryptophan. Often referred to as the Ehrlich pathway, these reactions generally occur during fermentation to produce a variety of carboxylic acids, sometimes collectively referred to as fusel acids. Depending on the redox state of the cells, alcohol derivatives may be produced instead of carboxylic acids.","definition_xrefs":["GOC:krc","PMID:18281432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid catabolic process via Ehrlich pathway","termid":"GO:0000955"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"amino acid catabolic process to carboxylic acid via Ehrlich pathway","termid":"GO:0000948"}


id: MOD:00569
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"Natural or modified residues that are isobaric at a resolution below 0.000001 Da.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"residues isobaric at a resolution below 0.01 Da","termid":"MOD:00770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"residues isobaric at a resolution below 0.000001 Da","termid":"MOD:00569"}


id: PBO:0038305
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_level","termid":"PBO:0038305"}


id: MONDO:0009879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Short stature due to growth hormone qualitative anomaly is characterized by growth retardation and short stature (despite the presence of normal or slightly elevated levels of immunoreactive growth hormone, GH), low concentrations of insulin-like growth factor-I (IGF-I) and a significant increase in growth rate following recombinant GH therapy. Prevalence is unknown but only a few cases have been reported in the literature. The syndrome is caused by various mutations in the GH1 gene (17q22-q24) that result in structural GH anomalies and a biologically inactive molecule. Transmission is autosomal recessive.","definition_xrefs":["Orphanet:629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isolated congenital growth hormone deficiency","termid":"MONDO:0000050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"short stature due to growth hormone qualitative anomaly","secondary_identifiers":["GARD:408","icd11.foundation:1665498704","MEDGEN:340412","MESH:C537505","OMIM:262650","UMLS:C1849779"],"synonyms":[{"name":"Biodefective Growth hormone","type":"related"},{"name":"KOWARSKI syndrome","type":"related"},{"name":"Kowarski syndrome","type":"exact"},{"name":"pituitary dwarfism with normal immunoreactive Growth hormone and Low Somatomedin","type":"related"}],"termid":"MONDO:0009879","xrefs":{"Monarch":{"xref_id":"0009879"}}}


id: MONDO:0023152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibrocartilaginous embolism (FCE) is a rare type of embolism (sudden blocking of an artery) that occurs in the spinal cord. FCE occurs when materials that are usually found within the vertebral disk of the spine enter into the nearby vascular system (veins and arteries) and block one of the spinal cord vessels. The signs and symptoms of FCE often develop after a minor or even unnoticed btriggering eventb such as lifting, straining, or falling. Symptoms of FCE may include neck and/or back pain, progressive muscle weakness, and paralysis.The exact underlying cause of FCE is poorly understood. Most cases occur sporadically in people with no family history of the disease. Diagnosis is based on imaging of the spinal cord and ruling out other causes of a blockage of the vascular system within the spinal cord. Treatment is generally focused on preventing possible complications and improving quality of life with medications and physical therapy.","definition_xrefs":["GARD:0009718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vascular disorder","termid":"MONDO:0005385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibrocartilaginous embolism","secondary_identifiers":["MEDGEN:419466","UMLS:C2931666","MESH:C537927"],"synonyms":[{"name":"embolism, fibrocartilaginous","type":"related"}],"termid":"MONDO:0023152","xrefs":{"Monarch":{"xref_id":"0023152"}}}


id: PBO:0036317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved eukaryotic protein, human C12orf45 ortholog, domain architectures indicate a possible role in translation","termid":"PBO:0036317"}


id: GO:0072635
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-31 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah","PMID:30328794","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"interleukin-31 production","secondary_identifiers":["GO:0072636"],"synonyms":[{"name":"IL-31 production","type":"exact"},{"name":"interleukin-31 secretion","type":"narrow"}],"termid":"GO:0072635"}


id: MONDO:1010224
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign prostatic hyperplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer or benign tumor, non-human animal","termid":"MONDO:1011305"},{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign prostatic hyperplasia, non-human animal","secondary_identifiers":["OMIA:002355"],"termid":"MONDO:1010224","xrefs":{"Monarch":{"xref_id":"1010224"}}}


id: GO:0045918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of cytolysis.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytolysis","termid":"GO:0042268"},{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"negatively_regulates","term_name":"cytolysis","termid":"GO:0019835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cytolysis","synonyms":[{"name":"down regulation of cytolysis","type":"exact"},{"name":"down-regulation of cytolysis","type":"exact"},{"name":"downregulation of cytolysis","type":"exact"},{"name":"inhibition of cytolysis","type":"narrow"}],"termid":"GO:0045918"}


id: PBO:0024802
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_part_structure_that_is_capable_of","termid":"PBO:0024802"}


id: PBO:0005541
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of lithium","termid":"PBO:0005541"}


id: MONDO:0033653
data:
  {"annotated_genes":["SJAG_01190"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87725],"is_not":false,"summary":null,"term":"MONDO:0033653"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01190":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 4 deficiency, nuclear type 18","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1752734","OMIM:619062","DOID:0070503","GARD:16415","UMLS:C5436720"],"synonyms":[{"name":"MC4DN18","type":"exact"},{"name":"mitochondrial complex IV deficiency, nuclear type 18","type":"exact"}],"termid":"MONDO:0033653","terms_by_termid":{"MONDO:0033653":null},"xrefs":{"Monarch":{"xref_id":"0033653"}}}


id: PBO:0074331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1","termid":"PBO:0074331"}


id: PBO:0013023
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postaxial acrofacial dysostosis syndrome","termid":"PBO:0013023"}


id: PBO:0075865
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SSX family pseudogene 5","termid":"PBO:0075865"}


id: GO:0072357
data:
  {"annotated_genes":["SJAG_04968","SJAG_03126","SJAG_02536"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71031,99707,118646],"is_not":false,"summary":null,"term":"GO:0072357"}]},"cv_name":"cellular_component","definition":"A protein serine/threonine phosphatase complex that contains a catalytic subunit (PPP1CA, PPP1CB or PPP1CC) and the regulatory subunits PPP1R10 (PNUTS), TOX4 and WDR82, and plays a role in the control of chromatin structure and cell cycle progression during the transition from mitosis into interphase.","definition_xrefs":["GOC:mah","PMID:20516061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein phosphatase type 1 complex","termid":"GO:0000164"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02536":null,"SJAG_03126":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"PTW/PP1 phosphatase complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0072357","terms_by_termid":{"GO:0072357":null}}


id: GO:1900208
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiolipin metabolic process.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"cardiolipin metabolic process","termid":"GO:0032048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of cardiolipin metabolic process","synonyms":[{"name":"regulation of cardiolipin metabolism","type":"exact"},{"name":"regulation of diphosphatidylglycerol metabolic process","type":"related"},{"name":"regulation of diphosphatidylglycerol metabolism","type":"related"}],"termid":"GO:1900208"}


id: GO:0052758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2,4,6-trinitrophenol + H- = 2,4,6-trinitrophenol hydride Meisenheimer complex. Coenzyme F420 supplies the hydride (H-) in the reaction.","definition_xrefs":["PMID:11995829","UM-BBD_reactionID:r1065","GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme F420-dependent 2,4,6-trinitrophenol reductase activity (obsolete GO:0052758)","synonyms":[{"name":"TNP reductase activity","type":"broad"},{"name":"coenzyme F420-dependent 2,4,6-trinitrophenol hydride transferase activity","type":"exact"}],"termid":"GO:0052758"}


id: PBO:0017989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermidine synthase Srm1 (predicted)","termid":"PBO:0017989"}


id: PBO:0051844
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iroquois homeobox 1","termid":"PBO:0051844"}


id: MOD:00100
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-leucine residue to L-leucine amide.","definition_xrefs":["PubMed:2578459","RESID:AA0091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C1-amidated residue","termid":"MOD:00883"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-leucine amide","synonyms":[{"name":"(2S)-2-amino-4-methylpentanamide","type":"exact"},{"name":"2-amino-4-methylvaleramide","type":"exact"},{"name":"2-azanyl-4-methylpentanamide","type":"exact"},{"name":"L-leucine amide","type":"exact"},{"name":"LeuN","type":"exact"},{"name":"MOD_RES Leucine amide","type":"exact"},{"name":"alpha-aminoisocaproamide","type":"exact"},{"name":"amidated L-leucine","type":"exact"},{"name":"leucinamide","type":"exact"}],"termid":"MOD:00100"}


id: PBO:0058151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4446","termid":"PBO:0058151"}


id: PBO:0058470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5572","termid":"PBO:0058470"}


id: PBO:0026827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_regulation_of_mitotic_DNA_replication_initiation","termid":"PBO:0026827"}


id: GO:1900691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of gliotoxin biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amide metabolic process","termid":"GO:0034250"},{"relation_name":"is_a","term_name":"positive regulation of sulfur metabolic process","termid":"GO:0051176"},{"relation_name":"is_a","term_name":"positive regulation of secondary metabolite biosynthetic process","termid":"GO:1900378"},{"relation_name":"is_a","term_name":"regulation of gliotoxin biosynthetic process","termid":"GO:1900689"},{"relation_name":"positively_regulates","term_name":"gliotoxin biosynthetic process","termid":"GO:2001310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0006790"},{"rel_name":"regulates","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0019748"],"is_obsolete":false,"name":"positive regulation of gliotoxin biosynthetic process","synonyms":[{"name":"activation of gliotoxin anabolism","type":"exact"},{"name":"activation of gliotoxin biosynthesis","type":"exact"},{"name":"activation of gliotoxin biosynthetic process","type":"narrow"},{"name":"activation of gliotoxin formation","type":"exact"},{"name":"activation of gliotoxin synthesis","type":"exact"},{"name":"positive regulation of gliotoxin anabolism","type":"exact"},{"name":"positive regulation of gliotoxin biosynthesis","type":"exact"},{"name":"positive regulation of gliotoxin formation","type":"exact"},{"name":"positive regulation of gliotoxin synthesis","type":"exact"},{"name":"up regulation of gliotoxin anabolism","type":"exact"},{"name":"up regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up regulation of gliotoxin formation","type":"exact"},{"name":"up regulation of gliotoxin synthesis","type":"exact"},{"name":"up-regulation of gliotoxin anabolism","type":"exact"},{"name":"up-regulation of gliotoxin biosynthesis","type":"exact"},{"name":"up-regulation of gliotoxin biosynthetic process","type":"exact"},{"name":"up-regulation of gliotoxin formation","type":"exact"},{"name":"up-regulation of gliotoxin synthesis","type":"exact"},{"name":"upregulation of gliotoxin anabolism","type":"exact"},{"name":"upregulation of gliotoxin biosynthesis","type":"exact"},{"name":"upregulation of gliotoxin biosynthetic process","type":"exact"},{"name":"upregulation of gliotoxin formation","type":"exact"},{"name":"upregulation of gliotoxin synthesis","type":"exact"}],"termid":"GO:1900691"}


id: MONDO:0009347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"phagocytic cell dysfunction","termid":"MONDO:0024627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"familial lipochrome histiocytosis","secondary_identifiers":["MEDGEN:90743","OMIM:235900","MESH:C562738","SCTID:234577004","UMLS:C0334125"],"synonyms":[{"name":"histiocytosis, familial lipochrome","type":"related"}],"termid":"MONDO:0009347","xrefs":{"Monarch":{"xref_id":"0009347"}}}


id: MONDO:0015694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma (disease) that involves the mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"melanoma","termid":"MONDO:0005105"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant melanoma of the mucosa","secondary_identifiers":["GARD:20110","UMLS:C5191057","MEDGEN:1676191","Orphanet:168999"],"synonyms":[{"name":"melanoma (disease) of mucosa","type":"exact"},{"name":"mucosa melanoma","type":"exact"},{"name":"mucosa melanoma (disease)","type":"exact"}],"termid":"MONDO:0015694","xrefs":{"Monarch":{"xref_id":"0015694"}}}


id: PBO:0061658
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NUMB endocytic adaptor protein","termid":"PBO:0061658"}


id: FYPO:0001900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which cytoplasmic mRNA processing bodies (P-bodies) are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component","termid":"FYPO:0000287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"small P-bodies","synonyms":[{"name":"decreased P-body formation","type":"related"},{"name":"small P bodies","type":"exact"},{"name":"small P-body","type":"exact"},{"name":"small cytoplasmic mRNA processing bodies","type":"exact"}],"termid":"FYPO:0001900"}


id: GO:0016476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the surface configuration of an embryonic cell.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of embryonic development","termid":"GO:0045995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of embryonic cell shape","synonyms":[{"name":"shape changes of embryonic cells","type":"related"}],"termid":"GO:0016476"}


id: PBO:0003428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase SWIRM1","termid":"PBO:0003428"}


id: PBO:0028294
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_dioxygenase_activity","termid":"PBO:0028294"}


id: GO:0004204
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase-5 activity (obsolete GO:0004204)","synonyms":[{"name":"caspase-5 activity","type":"exact"}],"termid":"GO:0004204"}


id: MONDO:0971115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"vascular neoplasm","termid":"MONDO:0024296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign vascular tumor","secondary_identifiers":["Orphanet:673470","UMLS:C1377916","MEDGEN:235124"],"termid":"MONDO:0971115","xrefs":{"Monarch":{"xref_id":"0971115"}}}


id: PBO:0044239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 9","termid":"PBO:0044239"}


id: MONDO:0003708
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive, high-grade and poorly differentiated carcinoma with neuroendocrine differentiation that arises from the extrahepatic bile ducts. It is characterized by the presence of malignant small cells.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small cell carcinoma","termid":"MONDO:0000402"},{"relation_name":"is_a","term_name":"extrahepatic bile duct adenocarcinoma","termid":"MONDO:0002665"},{"relation_name":"is_a","term_name":"liver neuroendocrine carcinoma","termid":"MONDO:0015072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct small cell adenocarcinoma","secondary_identifiers":["DOID:5926","UMLS:C1335979","NCIT:C5845","MEDGEN:277648"],"synonyms":[{"name":"Oat cell carcinoma of extrahepatic bile duct","type":"exact"},{"name":"Oat cell carcinoma of the extrahepatic bile duct","type":"exact"},{"name":"Oat cell extrahepatic bile duct carcinoma","type":"exact"},{"name":"extrahepatic bile duct small cell NEC","type":"exact"},{"name":"extrahepatic bile duct small cell neuroendocrine carcinoma","type":"exact"},{"name":"small cell adenocarcinoma of extrahepatic bile duct","type":"exact"},{"name":"small cell adenocarcinoma of the extrahepatic bile duct","type":"exact"},{"name":"small cell extrahepatic bile duct carcinoma","type":"exact"},{"name":"small cell extrahepatic bile duct neuroendocrine carcinoma","type":"exact"}],"termid":"MONDO:0003708","xrefs":{"Monarch":{"xref_id":"0003708"}}}


id: MONDO:0008680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary Wilms tumor","termid":"MONDO:0003321"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"Wilms tumor 2","secondary_identifiers":["MESH:C536853","OMIM:194071","GARD:8559","MEDGEN:854562","OMIM:605982","UMLS:C3887743"],"synonyms":[{"name":"FWT2","type":"related"},{"name":"WT2","type":"related"},{"name":"Wilms tumor 2","type":"exact"},{"name":"Wilms tumor 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumor type 2","type":"exact"},{"name":"Wilms tumour 2, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumour type 2","type":"exact"},{"name":"familial Wilms tumor 2","type":"related"},{"name":"familial Wilms tumour 2","type":"related"}],"termid":"MONDO:0008680","xrefs":{"Monarch":{"xref_id":"0008680"}}}


id: PBO:0041670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyclin binding protein pseudogene 3","termid":"PBO:0041670"}


id: PBO:0071639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 3","termid":"PBO:0071639"}


id: PBO:0055727
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain only 1","termid":"PBO:0055727"}


id: GO:0016326
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. The hydrolysis of ATP (and GTP) that drives the microtubular motor along microtubules.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete kinesin motor activity (obsolete GO:0016326)","synonyms":[{"name":"kinesin motor activity","type":"exact"}],"termid":"GO:0016326"}


id: PBO:0059269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L33","termid":"PBO:0059269"}


id: PBO:0113482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Telobox-containing general regulatory factor; binds TTAGGG repeats within subtelomeric anti-silencing regions (STARs), blocking silent chromatin propagation; binds majority of snoRNA gene promoters, required for full snoRNA expression; caps DSB flanked by long T2AG3 repeats and blocks checkpoint activation; involved in nucleosome displacement during double-strand break repair","termid":"PBO:0113482"}


id: FYPO:0006646
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the duration of prometaphase of mitosis normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal duration of mitotic M phase","termid":"FYPO:0004310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000002","FYPO:0000257","FYPO:0001320"],"is_obsolete":false,"name":"normal duration of mitotic prometaphase","synonyms":[{"name":"normal duration of mitotic prometaphase during vegetative growth","type":"exact"},{"name":"normal duration of prometaphase during mitotic cell cycle","type":"exact"},{"name":"normal duration of prometaphase of mitosis","type":"exact"}],"termid":"FYPO:0006646"}


id: PBO:0083878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ferredoxin of the mitochondrial matrix; required for formation of cellular iron-sulfur proteins; involved in heme A biosynthesis; human homolog FDX1L can complement yeast by allowing growth during down-regulation of yeast YAH1","termid":"PBO:0083878"}


id: GO:0000393
data:
  {"annotated_genes":["SJAG_01152","SJAG_02455","SJAG_04497","SJAG_02295","SJAG_01214","SJAG_01504","SJAG_01315","SJAG_00859","SJAG_01200"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65764],"is_not":false,"summary":null,"term":"GO:0000393"},{"annotations":[58705,79913,107801],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000349"},{"annotations":[79287,111592,75090,106877],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000350"},{"annotations":[102655],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000388"}]},"cv_name":"biological_process","definition":"Structural rearrangements of the spliceosome complex, containing RNA to be spliced, to generate a catalytic conformation.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00859":null,"SJAG_01152":null,"SJAG_01200":null,"SJAG_01214":null,"SJAG_01315":null,"SJAG_01504":null,"SJAG_02295":null,"SJAG_02455":null,"SJAG_04497":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0016071","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"spliceosomal conformational changes to generate catalytic conformation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"3'-splice site cleavage, exon ligation","type":"broad"}],"termid":"GO:0000393","terms_by_termid":{"GO:0000349":null,"GO:0000350":null,"GO:0000388":null,"GO:0000393":null}}


id: GO:0015429
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete peroxisomal fatty acyl transporter (obsolete GO:0015429)","synonyms":[{"name":"peroxisomal fatty acyl transporter","type":"exact"}],"termid":"GO:0015429"}


id: PBO:0085718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in synthesis of the thiamine precursor HMP; member of a subtelomeric gene family including THI5, THI11, THI12, and THI13; hydroxymethylpyrimidine is also known as HMP","termid":"PBO:0085718"}


id: PBO:0075111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 160","termid":"PBO:0075111"}


id: GO:0075606
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a virus, or part of a virus, towards the host cell nucleus. The process begins after viral entry, and ends when the viral material is at the nuclear membrane.","definition_xrefs":["GOC:jl","VZ:990","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport of virus","termid":"GO:0075733"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"transport of viral material towards nucleus","synonyms":[{"name":"cytoplasmic inwards viral transport","type":"exact"},{"name":"transport of viral material to nucleus","type":"exact"},{"name":"viral genome transport to host cell nucleus","type":"exact"}],"termid":"GO:0075606"}


id: MONDO:0009622
data:
  {"annotated_genes":["SJAG_01076"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89258],"is_not":false,"summary":null,"term":"MONDO:0009622"}]},"cv_name":"mondo","definition":"Jawad syndrome is a rare, genetic, multiple congenital anomalies/dysmorphic syndrome characterized by congenital microcephaly with facial dysmorphism (sloping forehead, prominent nose, mild retrognathia), moderate to severe, non-progressive intellectual disability and symmetrical digital malformations of variable degree, including brachydactyly of the fifth fingers with single flexion crease, clinodactyly, syndactyly, polydactyly and hallux valgus. Congenital anonychia and white café au lait-like spots on the skin of hands and feet are also associated.","definition_xrefs":["Orphanet:313795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01076":null},"genotype_count":0,"is_obsolete":false,"name":"Jawad syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:251255","UMLS:C0796063","GARD:17410","MEDGEN:810673"],"synonyms":[{"name":"JAWAD syndrome","type":"related"},{"name":"JWDS","type":"related"},{"name":"Jawad syndrome","type":"exact"},{"name":"Kelly syndrome","type":"related"},{"name":"microcephaly with intellectual disability and digital anomalies","type":"related"},{"name":"microcephaly with mental retardation and digital anomalies","type":"related"}],"termid":"MONDO:0009622","terms_by_termid":{"MONDO:0009622":null},"xrefs":{"Monarch":{"xref_id":"0009622"}}}


id: MONDO:0008157
data:
  {"annotated_genes":["SJAG_03449"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87322],"is_not":false,"summary":null,"term":"MONDO:0008157"}]},"cv_name":"mondo","definition":"Buschke-Ollendorff syndrome (BOS) is a benign disorder characterized by the association of osteopoikilosis lesions (``spotted bones'') in the skeleton and connective tissue nevi in the skin.","definition_xrefs":["Orphanet:1306"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"osteopetrosis","termid":"MONDO:0017198"},{"relation_name":"excluded_subClassOf","term_name":"obsolete dermis elastic tissue disorder (obsolete MONDO:0019292)","termid":"MONDO:0019292"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"laminopathy","termid":"MONDO:0021106"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03449":null},"genotype_count":0,"is_obsolete":false,"name":"Buschke-Ollendorff syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1556522143","GARD:1044","MEDGEN:120545","DOID:0111536","MESH:C537415","OMIM:166700","UMLS:C0265514"],"synonyms":[{"name":"Bos","type":"related"},{"name":"Buschke Ollendorff syndrome","type":"related"},{"name":"Buschke-Ollendorff syndrome","type":"exact"},{"name":"Dermatoosteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata with osteopoikilosis","type":"related"},{"name":"dermatofibrosis lenticularis disseminata, isolated","type":"related"},{"name":"dermatofibrosis, disseminated with osteopoikilosis","type":"related"},{"name":"dermatofibrosis, disseminated, with osteopoikilosis","type":"related"},{"name":"disseminated dermatofibrosis with osteopoikilosis","type":"exact"},{"name":"osteopathia condensans disseminata","type":"related"},{"name":"osteopoikilosis with melorheostosis","type":"related"},{"name":"osteopoikilosis with or without melorheostosis","type":"exact"},{"name":"osteopoikilosis, isolated","type":"related"}],"termid":"MONDO:0008157","terms_by_termid":{"MONDO:0008157":null},"xrefs":{"Monarch":{"xref_id":"0008157"}}}


id: GO:0035292
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification of the characteristic structures of trunk segments, following establishment of segment boundaries. In Drosophila, the trunk segments include thoracic segments and abdominal segments A1 to A8. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["PMID:1360402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"segment specification","termid":"GO:0007379"},{"relation_name":"part_of","term_name":"trunk segmentation","termid":"GO:0035290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of segmental identity, trunk","termid":"GO:0035292"}


id: PBO:0043501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin associated protein 2","termid":"PBO:0043501"}


id: PBO:0034075
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ribosomally_translates_to","termid":"PBO:0034075"}


id: PBO:0029550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_cell_at_low_temperature","termid":"PBO:0029550"}


id: MONDO:0017030
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete interstitial lung disease in childhood and adulthood (obsolete MONDO:0017030)","secondary_identifiers":["Orphanet:264757"],"synonyms":[{"name":"ILD in childhood and adulthood","type":"exact"}],"termid":"MONDO:0017030","xrefs":{"Monarch":{"xref_id":"0017030"}}}


id: PBO:0056905
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MIF4GD divergent transcript","termid":"PBO:0056905"}


id: MONDO:0100213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An X-linked multiple congenital anomaly disorder with variable severity. The classic triad, which defines IFAP, is ichthyosis follicularis, atrichia, and photophobia. Some patients have additional features, including mental retardation, brain anomalies, Hirschsprung disease, corneal opacifications, kidney dysplasia, cryptorchidism, cleft palate, and skeletal malformations, particularly of the vertebrae, which constitutes BRESHECK syndrome.","definition_xrefs":["OMIM:308205"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete malformation syndrome with skin/mucosae involvement (obsolete MONDO:0015331)","termid":"MONDO:0015331"},{"relation_name":"excluded_subClassOf","term_name":"X-linked ichthyosis syndrome","termid":"MONDO:0017269"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary alopecia (obsolete MONDO:0021034)","termid":"MONDO:0021034"},{"relation_name":"is_a","term_name":"X-linked recessive disease","termid":"MONDO:0020605"},{"relation_name":"is_a","term_name":"IFAP syndrome","termid":"MONDO:0100212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"IFAP syndrome 1, with or without BRESHECK syndrome","secondary_identifiers":["GARD:15297","MEDGEN:1746744","NANDO:2200999","UMLS:C5399971","MESH:C536085","DOID:0111821"],"synonyms":[{"name":"IFAP syndrome with or without BRESHECK syndrome","type":"exact"},{"name":"IFAP syndrome with or without BRESHECK syndrome, X-linked recessive","type":"exact"},{"name":"IFAP/BRESHECK syndrome","type":"exact"},{"name":"ichthyosis follicularis atrichia photophobia syndrome","type":"related"},{"name":"ichthyosis follicularis, atrichia, and photophobia with or without brain anomalies, retardation, ectodermal dysplasia, skeletal malformations, Hirschsprung disease, Ear/eye anomalies, cleft palate/cryptorchidism, and kidney dysplasia/hypoplasia","type":"exact"},{"name":"ichthyosis follicularis-alopecia-photophobia syndrome","type":"broad"}],"termid":"MONDO:0100213","xrefs":{"Monarch":{"xref_id":"0100213"}}}


id: PBO:0043967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crystallin zeta","termid":"PBO:0043967"}


id: GO:1901297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment.","definition_xrefs":["GOC:TermGenie","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of canonical Wnt signaling pathway involved in cardiac muscle cell fate commitment (obsolete GO:1901297)","synonyms":[{"name":"activation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"narrow"},{"name":"activation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"positive regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"positive regulation of canonical Wnt-activated signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"up regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"up regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"up-regulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"upregulation of canonical Wnt receptor signaling pathway involved in cardiac muscle cell fate commitment","type":"exact"},{"name":"upregulation of canonical Wnt receptor signalling pathway involved in cardiac muscle cell fate commitment","type":"exact"}],"termid":"GO:1901297"}


id: PBO:0109467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-ribosyldihydronicotinamide:quinone dehydrogenase 2","termid":"PBO:0109467"}


id: GO:0060882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that results in the breakdown of the basement membrane that contributes to the process of semicircular canal fusion.","definition_xrefs":["GOC:dph","GOC:tb","GOC:sdb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basement membrane disassembly","termid":"GO:0034769"},{"relation_name":"part_of","term_name":"semicircular canal fusion","termid":"GO:0060879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"basement membrane disassembly involved in semicircular canal fusion","synonyms":[{"name":"basal lamina disassembly involved in semicircular canal fusion","type":"related"}],"termid":"GO:0060882"}


id: GO:0002552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of serotonin by a mast cell or group of mast cells.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin secretion involved in inflammatory response","termid":"GO:0002442"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"exocytic process","termid":"GO:0140029"},{"relation_name":"part_of","term_name":"mast cell degranulation","termid":"GO:0043303"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0006810","GO:0023052","GO:0051179"],"is_obsolete":false,"name":"serotonin secretion by mast cell","synonyms":[{"name":"serotonin release by mast cell","type":"related"}],"termid":"GO:0002552"}


id: PBO:0049088
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143","termid":"PBO:0049088"}


id: PBO:0057523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 641","termid":"PBO:0057523"}


id: MONDO:0005515
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the oral cavity. The majority are squamous cell carcinomas.","definition_xrefs":["NCIT:C9314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system cancer","termid":"MONDO:0002516"},{"relation_name":"is_a","term_name":"oral cavity neoplasm","termid":"MONDO:0021245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"oral cavity cancer","secondary_identifiers":["ICD9:144.1","ICD9:144","ICD9:144.9","SCTID:363385007","ICD9:145.9","SCTID:363505006","EFO:0005570","DOID:8618","ICD9:145.8","UMLS:C0153381","MEDGEN:56298","ICD9:149.8","ICD9:144.0"],"synonyms":[{"name":"cancer of oral cavity","type":"exact"},{"name":"malignant mouth neoplasm","type":"exact"},{"name":"malignant mouth tumor","type":"exact"},{"name":"malignant mouth tumour","type":"exact"},{"name":"malignant neoplasm of anterior portion of floor of mouth","type":"narrow"},{"name":"malignant neoplasm of floor of mouth","type":"narrow"},{"name":"malignant neoplasm of lateral floor of mouth","type":"narrow"},{"name":"malignant neoplasm of lateral portion of floor of mouth","type":"narrow"},{"name":"malignant neoplasm of mouth","type":"exact"},{"name":"malignant neoplasm of oral cavity","type":"exact"},{"name":"malignant neoplasm of the mouth","type":"exact"},{"name":"malignant oral cavity neoplasm","type":"exact"},{"name":"malignant oral cavity tumor","type":"exact"},{"name":"malignant oral cavity tumour","type":"exact"},{"name":"malignant tumor of anterior floor of mouth","type":"exact"},{"name":"malignant tumor of lateral floor of mouth","type":"exact"},{"name":"malignant tumor of mouth","type":"exact"},{"name":"malignant tumor of oral cavity","type":"exact"},{"name":"malignant tumor of the floor of the mouth","type":"narrow"},{"name":"malignant tumor of the mouth","type":"exact"},{"name":"malignant tumour of anterior floor of mouth","type":"exact"},{"name":"malignant tumour of lateral floor of mouth","type":"exact"},{"name":"malignant tumour of mouth","type":"exact"},{"name":"malignant tumour of oral cavity","type":"exact"},{"name":"malignant tumour of the floor of the mouth","type":"narrow"},{"name":"malignant tumour of the mouth","type":"exact"},{"name":"mouth cancer","type":"related"},{"name":"oral cavity cancer","type":"exact"}],"termid":"MONDO:0005515","xrefs":{"Monarch":{"xref_id":"0005515"}}}


id: MONDO:0020373
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset partial cataract","termid":"MONDO:0020377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"early-onset anterior polar cataract","secondary_identifiers":["MEDGEN:340806","GARD:1140","Orphanet:98988","UMLS:C1855179"],"synonyms":[{"name":"cataract anterior polar","type":"related"},{"name":"early-onset anterior subcapsular cataract","type":"exact"}],"termid":"MONDO:0020373","xrefs":{"Monarch":{"xref_id":"0020373"}}}


id: GO:2000468
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of peroxidase activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of peroxidase activity (obsolete GO:2000468)","synonyms":[{"name":"regulation of donor:hydrogen-peroxide oxidoreductase activity","type":"exact"},{"name":"regulation of oxyperoxidase activity","type":"exact"},{"name":"regulation of peroxidase reaction","type":"exact"}],"termid":"GO:2000468"}


id: GO:0036432
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + undecaprenol + all-trans-undecaprenyl phosphate + ADP + H+.","definition_xrefs":["RHEA:23752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"undecaprenol kinase activity","termid":"GO:0009038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"all-trans undecaprenol kinase activity","termid":"GO:0036432"}


id: PBO:0068355
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 138","termid":"PBO:0068355"}


id: PBO:0082217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha 6 subunit of the 20S proteasome; protein abundance increases in response to DNA replication stress","termid":"PBO:0082217"}


id: GO:1905798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of intraciliary anterograde transport.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","PMID:27930654"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of organelle organization","termid":"GO:0010638"},{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"is_a","term_name":"regulation of intraciliary anterograde transport","termid":"GO:1905796"},{"relation_name":"positively_regulates","term_name":"intraciliary anterograde transport","termid":"GO:0035720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of intraciliary anterograde transport","synonyms":[{"name":"activation of intraciliary anterograde transport","type":"narrow"},{"name":"activation of intraflagellar anterograde transport","type":"narrow"},{"name":"positive regulation of intraflagellar anterograde transport","type":"exact"},{"name":"up regulation of intraciliary anterograde transport","type":"exact"},{"name":"up regulation of intraflagellar anterograde transport","type":"exact"},{"name":"up-regulation of intraciliary anterograde transport","type":"exact"},{"name":"up-regulation of intraflagellar anterograde transport","type":"exact"},{"name":"upregulation of intraciliary anterograde transport","type":"exact"},{"name":"upregulation of intraflagellar anterograde transport","type":"exact"}],"termid":"GO:1905798"}


id: MONDO:0003706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"adult astrocytic tumor","termid":"MONDO:0002503"},{"relation_name":"is_a","term_name":"adult brainstem glioma","termid":"MONDO:0003153"},{"relation_name":"is_a","term_name":"brain stem astrocytic neoplasm","termid":"MONDO:0003173"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult brainstem astrocytoma","secondary_identifiers":["NCIT:C6954","UMLS:C1332191","MEDGEN:233962","DOID:5922"],"synonyms":[{"name":"adult brain stem astrocytoma","type":"exact"},{"name":"adult brainstem astrocytoma","type":"exact"}],"termid":"MONDO:0003706","xrefs":{"Monarch":{"xref_id":"0003706"}}}


id: MONDO:0003249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal malignant growth of the cells that comprise the pineal parenchyma.","definition_xrefs":["NCIT:C3573"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thalamic cancer","termid":"MONDO:0003766"},{"relation_name":"is_a","term_name":"malignant endocrine neoplasm","termid":"MONDO:0021069"},{"relation_name":"is_a","term_name":"pineal body neoplasm","termid":"MONDO:0021232"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pineal gland cancer","secondary_identifiers":["ICD9:194.4","DOID:5032","ICD10CM:C75.3","NCIT:C6965","SCTID:363483004","UMLS:C0153655","MEDGEN:102284"],"synonyms":[{"name":"cancer of pineal body","type":"exact"},{"name":"malignant neoplasm of pineal body","type":"exact"},{"name":"malignant neoplasm of pineal gland","type":"exact"},{"name":"malignant neoplasm of the pineal gland","type":"exact"},{"name":"malignant pineal area neoplasm","type":"exact"},{"name":"malignant pineal area tumor","type":"exact"},{"name":"malignant pineal area tumour","type":"exact"},{"name":"malignant pineal body neoplasm","type":"exact"},{"name":"malignant pineal gland neoplasm","type":"exact"},{"name":"malignant pineal gland tumor","type":"exact"},{"name":"malignant pineal gland tumour","type":"exact"},{"name":"malignant pineal region neoplasm","type":"exact"},{"name":"malignant pineal region tumor","type":"exact"},{"name":"malignant pineal region tumour","type":"exact"},{"name":"malignant tumor of pineal gland","type":"exact"},{"name":"malignant tumor of the pineal gland","type":"exact"},{"name":"malignant tumour of pineal gland","type":"exact"},{"name":"malignant tumour of the pineal gland","type":"exact"},{"name":"neoplasm of the pineal region","type":"broad"},{"name":"pineal body cancer","type":"exact"},{"name":"pinealoma","type":"related"},{"name":"pineocytic tumor","type":"broad"},{"name":"pineocytic tumour","type":"broad"},{"name":"tumor of the pineal region","type":"broad"},{"name":"tumour of the pineal region","type":"broad"}],"termid":"MONDO:0003249","xrefs":{"Monarch":{"xref_id":"0003249"}}}


id: PBO:0043724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C pseudogene 3","termid":"PBO:0043724"}


id: GO:0033715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: inosine + O2 = 9-riburonosylhypoxanthine + 2 H2O; (1a) 2 inosine + O2 = 2 5'-dehydroinosine + 2 H2O, and (1b) 2 5'-dehydroinosine + O2 = 2 9-riburonosylhypoxanthine + 2 H2O.","definition_xrefs":["EC:1.1.3.28","RHEA:28651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, oxygen as acceptor","termid":"GO:0016899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"nucleoside oxidase activity","secondary_identifiers":["MetaCyc:NUCLEOSIDE-OXIDASE-RXN"],"synonyms":[{"name":"nucleoside:oxygen 5'-oxidoreductase activity","type":"related"}],"termid":"GO:0033715"}


id: GO:0180028
data:
  {"annotated_genes":["SJAG_01242","SJAG_04489","SJAG_03783","SJAG_05207","SJAG_05303"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89960,99965,102909,105740,116764],"is_not":false,"summary":null,"term":"GO:0180028"}]},"cv_name":"cellular_component","definition":"A region of the nuclear envelope to which a spindle pole body (SPB) attaches; protein complexes embedded in the nuclear envelope mediate direct or indirect linkages between the microtubule cytoskeleton and the nuclear envelope.","definition_xrefs":["PMID:37783794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule organizing center attachment site","termid":"GO:0034992"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01242":null,"SJAG_03783":null,"SJAG_04489":null,"SJAG_05207":null,"SJAG_05303":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"mitotic spindle pole body attachment site","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180028","terms_by_termid":{"GO:0180028":null}}


id: PBO:0053093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late cornified envelope 3A","termid":"PBO:0053093"}


id: PBO:0080861
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 domain family member 2","termid":"PBO:0080861"}


id: PBO:0060330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myosin IH","termid":"PBO:0060330"}


id: MONDO:0021116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A biologic subset of breast carcinoma defined by high expression of genes characteristic of luminal epithelial cells, including estrogen receptor (ER), estrogen regulated protein LIV-1, and the transcription factors hepatocyte nuclear factor 3, HNF3A, XBP1, and GATA 3. This subtype of breast cancer is associated with a good prognosis.","definition_xrefs":["NCIT:C53554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast tumor luminal A or B","termid":"MONDO:0004990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"luminal A breast carcinoma","secondary_identifiers":["UMLS:C3642345","MEDGEN:770985"],"synonyms":[{"name":"Luminal A","type":"exact"},{"name":"Luminal A breast cancer","type":"exact"},{"name":"Luminal A breast carcinoma","type":"exact"},{"name":"Luminal A estrogen receptor positive subtype of breast carcinoma","type":"exact"},{"name":"Luminal A oestrogen receptor positive subtype of breast carcinoma","type":"exact"},{"name":"Luminal A subtype of breast carcinoma","type":"exact"}],"termid":"MONDO:0021116","xrefs":{"Monarch":{"xref_id":"0021116"}}}


id: MONDO:1011414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vestibular disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auditory system disorder, non-human animal","termid":"MONDO:1011301"},{"relation_name":"is_a","term_name":"otorhinolaryngologic disease, non-human animal","termid":"MONDO:1011342"},{"relation_name":"is_a","term_name":"perceptual disorders, non-human animal","termid":"MONDO:1011343"},{"relation_name":"is_a","term_name":"neuromuscular disease, non-human animal","termid":"MONDO:1012983"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vestibular disease, non-human animal","secondary_identifiers":["OMIA:002263"],"termid":"MONDO:1011414","xrefs":{"Monarch":{"xref_id":"1011414"}}}


id: FYPO:0006090
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glutathione hydrolase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased peptidase activity","termid":"FYPO:0000667"},{"relation_name":"is_a","term_name":"abnormal glutathione hydrolase activity","termid":"FYPO:0006089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased glutathione hydrolase activity","termid":"FYPO:0006090"}


id: PBO:0110337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"beta-1,4-N-acetyl-galactosaminyltransferase 2 (SID blood group)","termid":"PBO:0110337"}


id: PBO:0049580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.4 histone, cluster member","termid":"PBO:0049580"}


id: MONDO:0007426
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, unilateral","secondary_identifiers":["UMLS:C2607947","MEDGEN:435850","OMIM:125000","MESH:C567079"],"synonyms":[{"name":"deafness, unilateral","type":"exact"}],"termid":"MONDO:0007426","xrefs":{"Monarch":{"xref_id":"0007426"}}}


id: PBO:0070280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 21","termid":"PBO:0070280"}


id: PBO:0079433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tubulin gamma 2","termid":"PBO:0079433"}


id: PBO:0030225
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_tacrolimus_during_salt_stress","termid":"PBO:0030225"}


id: PR:P87109
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A phospholipase DDHD2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00563","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C20G8.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.02","secondary_identifiers":["UniProtKB:P87109"],"synonyms":[{"name":"Spom972h-DDHD2","type":"exact"}],"termid":"PR:P87109"}


id: MONDO:0002408
data:
  {"annotated_genes":["SJAG_01344","SJAG_05213","SJAG_03785"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87283,87282,87284],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009380"}]},"cv_name":"mondo","definition":"An inherited disorder affecting the metabolism of bilirubin. It results in increased levels of bilirubin in the blood. Representative examples of this condition include Gilbert syndrome and Crigler-Najjar syndrome.","definition_xrefs":["NCIT:C84761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of bilirubin metabolism","termid":"MONDO:0017755"},{"relation_name":"is_a","term_name":"hyperbilirubinemia","termid":"MONDO:0024288"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01344":null,"SJAG_03785":null,"SJAG_05213":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hereditary hyperbilirubinemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6963","OMIMPS:237450","SCTID:14783006","UMLS:C0020435","MESH:D006933","DOID:2741"],"synonyms":[{"name":"bilirubin metabolic disorder","type":"broad"},{"name":"hereditary hyperbilirubinemia","type":"exact"},{"name":"hyperbilirubinaemia","type":"broad"},{"name":"hyperbilirubinemia","type":"broad"}],"termid":"MONDO:0002408","terms_by_termid":{"MONDO:0009380":null},"xrefs":{"Monarch":{"xref_id":"0002408"}}}


id: PBO:0041711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calmodulin like 3","termid":"PBO:0041711"}


id: PBO:0039458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 10","termid":"PBO:0039458"}


id: MONDO:0003341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glomus tumor arising in the finger and usually associated with pain.","definition_xrefs":["NCIT:C36079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin glomus tumor","termid":"MONDO:0002295"},{"relation_name":"is_a","term_name":"nail tumor","termid":"MONDO:0017588"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"subungual glomus tumor","secondary_identifiers":["ICD9:228.09","DOID:5236","SCTID:403973004","UMLS:C1304510","MEDGEN:266273"],"synonyms":[{"name":"subungual glomus tumor","type":"exact"}],"termid":"MONDO:0003341","xrefs":{"Monarch":{"xref_id":"0003341"}}}


id: PBO:0119599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial translational activator for cob1, PPR repeat, Cbp8","termid":"PBO:0119599"}


id: PBO:0059537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrially encoded transcription factor binding site L","termid":"PBO:0059537"}


id: PBO:0005201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore protein Mis16","termid":"PBO:0005201"}


id: MONDO:0007323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chondronectin","secondary_identifiers":["MEDGEN:854532","UMLS:C3887693","OMIM:118670"],"synonyms":[{"name":"Chondronectin","type":"exact"}],"termid":"MONDO:0007323","xrefs":{"Monarch":{"xref_id":"0007323"}}}


id: FYPO:0000461
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype in which flocculation does not occur.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete flocculation abolished (obsolete FYPO:0000461)","synonyms":[{"name":"absent flocculation","type":"exact"},{"name":"flocculation: absent","type":"related"}],"termid":"FYPO:0000461"}


id: MONDO:0002341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the arteries that is characterized by the presence of granulomas.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"granulomatous angiitis","secondary_identifiers":["MESH:D020293","NCIT:C34653","DOID:2555","UMLS:C0018202","MEDGEN:9088"],"synonyms":[{"name":"Granulomatous arteritis","type":"exact"}],"termid":"MONDO:0002341","xrefs":{"Monarch":{"xref_id":"0002341"}}}


id: PBO:0050048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major histocompatibility complex, class I, K (pseudogene)","termid":"PBO:0050048"}


id: GO:0030621
data:
  {"annotated_genes":["SJAG_00531"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73584],"is_not":false,"summary":null,"term":"GO:0030621"}]},"cv_name":"molecular_function","definition":"Binding to a U4 small nuclear RNA (U4 snRNA).","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA binding","termid":"GO:0017069"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00531":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723"],"is_obsolete":false,"name":"U4 snRNA binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0030621","terms_by_termid":{"GO:0030621":null}}


id: PBO:0059574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metallothionein 2A","termid":"PBO:0059574"}


id: FYPO:0002117
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a specified transporter activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transmembrane transporter activity","termid":"FYPO:0002116"},{"relation_name":"is_a","term_name":"abolished molecular function","termid":"FYPO:0005446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002114"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000652","FYPO:0000002","FYPO:0000707","FYPO:0000138","FYPO:0002114","FYPO:0001985"],"is_obsolete":false,"name":"abolished transporter activity","synonyms":[{"name":"transporter activity abolished","type":"exact"}],"termid":"FYPO:0002117"}


id: GO:0050607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formaldehyde + mycothiol + NAD+ = S-formylmycothiol + NADH + H+.","definition_xrefs":["EC:1.1.1.306"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mycothiol-dependent formaldehyde dehydrogenase activity","secondary_identifiers":["RHEA:28502","MetaCyc:1.2.1.66-RXN"],"synonyms":[{"name":"NAD/factor-dependent formaldehyde dehydrogenase activity","type":"related"},{"name":"formaldehyde:NAD+ oxidoreductase (mycothiol-formylating)","type":"exact"}],"termid":"GO:0050607"}


id: PBO:0054142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1508","termid":"PBO:0054142"}


id: MONDO:0008809
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Digital extensor muscle aplasia-polyneuropathy is a rare, hereditary motor and sensory neuropathy characterized by flexion deformities of the thumb and fingers, sensory deficit in the hand and polyneuropathic electrophysiologic findings in the limbs. Operation on the hands reveals extensor muscles and their tendons to be absent or hypoplastic. There have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:2926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary motor and sensory neuropathy","termid":"MONDO:0015358"},{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"polyneuropathy-hand defect syndrome","secondary_identifiers":["GARD:2589","UMLS:C1859752","MEDGEN:349240","MESH:C535624","OMIM:207740"],"synonyms":[{"name":"Hamanishi Ueba Tsuji syndrome","type":"exact"},{"name":"Hamanishi-Ueba-Tsuji syndrome","type":"exact"},{"name":"aplasia of extensor muscles of fingers, unilateral, with generalised polyneuropathy","type":"related"},{"name":"aplasia of extensor muscles of fingers, unilateral, with generalized polyneuropathy","type":"related"},{"name":"congenital aplasia of the extensor muscles of the fingers and thumb associated with generalised polyneuropathy","type":"related"},{"name":"congenital aplasia of the extensor muscles of the fingers and thumb associated with generalized polyneuropathy","type":"related"},{"name":"digital extensor muscle aplasia-polyneuropathy","type":"related"},{"name":"polyneuropathy, hand defect","type":"related"}],"termid":"MONDO:0008809","xrefs":{"Monarch":{"xref_id":"0008809"}}}


id: PBO:0067202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 267, pseudogene","termid":"PBO:0067202"}


id: GO:0072170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a metanephric tubule over time, from its initial formation to the mature structure. A metanephric tubule is an epithelial tube that is part of the metanephros.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"is_a","term_name":"metanephric epithelium development","termid":"GO:0072207"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric tubule development","termid":"GO:0072170"}


id: GO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the swim bladder over time, from its formation to the mature structure. The swim bladder is used by some fishes to maintain buoyancy and may function in addition as a sound producing organ, a sound receptor, and a respiratory organ.","definition_xrefs":["GOC:mh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"swim bladder development","synonyms":[{"name":"gas bladder development","type":"exact"}],"termid":"GO:0048794"}


id: MONDO:1011452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intervertebral disc disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intervertebral disc disease, non-human animal","secondary_identifiers":["OMIA:000157"],"termid":"MONDO:1011452","xrefs":{"Monarch":{"xref_id":"1011452"}}}


id: MONDO:0002244
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A coagulation disorder characterized by the partial or complete absence of factor VII activity in the blood.","definition_xrefs":["NCIT:C131631"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coagulation protein disease","termid":"MONDO:0002242"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor VII deficiency","secondary_identifiers":["UMLS:C0015503","MESH:D005168","ICD9:286.3","NANDO:2200675","SCTID:37193007","MEDGEN:8769"],"synonyms":[{"name":"F7 deficiency","type":"exact"},{"name":"deficiency, stable","type":"exact"},{"name":"factor 7 deficiency","type":"exact"},{"name":"factor VII deficiency","type":"exact"}],"termid":"MONDO:0002244","xrefs":{"Monarch":{"xref_id":"0002244"}}}


