# terms

id: PBO:0110561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol synthase (CDP-diacylglycerol--inositol 3-phosphatidyltransferase) Pis1","termid":"PBO:0110561"}


id: MONDO:0020171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete palpebral tumor (obsolete MONDO:0020171)","termid":"MONDO:0020171","xrefs":{"Monarch":{"xref_id":"0020171"}}}


id: PBO:0027152
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vacuolar_lysine_level","termid":"PBO:0027152"}


id: GO:0010626
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency or extent of the multiplication or reproduction of Schwann cells, resulting in the expansion of their population. Schwann cells are a type of glial cell in the peripheral nervous system.","definition_xrefs":["GOC:sl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Schwann cell proliferation","termid":"GO:0010624"},{"relation_name":"is_a","term_name":"negative regulation of glial cell proliferation","termid":"GO:0060253"},{"relation_name":"negatively_regulates","term_name":"Schwann cell proliferation","termid":"GO:0014010"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of Schwann cell proliferation","termid":"GO:0010626"}


id: GO:1900349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of methane biosynthetic process from methylamine.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amine metabolic process","termid":"GO:0033239"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from methylamine","termid":"GO:1900348"},{"relation_name":"is_a","term_name":"negative regulation of alkane biosynthetic process","termid":"GO:1901578"},{"relation_name":"is_a","term_name":"negative regulation of cellular respiration","termid":"GO:1901856"},{"relation_name":"negatively_regulates","term_name":"methane biosynthetic process from methylamine","termid":"GO:2001128"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"negative regulation of methane biosynthetic process from methylamine","synonyms":[{"name":"down regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"down-regulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"downregulation of methane biosynthetic process from methylamine","type":"exact"},{"name":"inhibition of methane biosynthetic process from methylamine","type":"narrow"}],"termid":"GO:1900349"}


id: GO:0006163
data:
  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ummary":null,"term":"GO:0042776"},{"annotations":[74376,75823,99723],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006164"},{"annotations":[71970],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[78091],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"},{"annotations":[110312,77592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a purine nucleotide, a compound consisting of nucleoside (a purine base linked to a deoxyribose or ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide metabolic process","termid":"GO:0009117"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic 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id: GO:0031906
data:
  {"annotated_genes":["SJAG_02432"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[99644],"is_not":false,"summary":null,"term":"GO:0031906"}]},"cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a late endosome.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome lumen","termid":"GO:0031904"},{"relation_name":"part_of","term_name":"late endosome","termid":"GO:0005770"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02432":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005768","GO:0005737","GO:0031410"],"is_obsolete":false,"name":"late endosome lumen","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0031906","terms_by_termid":{"GO:0031906":null}}


id: PBO:0063254
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 1","termid":"PBO:0063254"}


id: SO:0000697
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a transcript with stop codon readthrough.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_part","term_name":"stop_codon_read_through","termid":"SO:0000883"},{"relation_name":"is_a","term_name":"gene_with_recoded_mRNA","termid":"SO:0000693"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_stop_codon_read_through","synonyms":[{"name":"gene with stop codon read through","type":"exact"}],"termid":"SO:0000697"}


id: MONDO:0014079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"restless legs syndrome, susceptibility to","termid":"MONDO:0100170"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to, 8","secondary_identifiers":["UMLS:C3554664","OMIM:615197","MEDGEN:767578"],"synonyms":[{"name":"RLS8","type":"exact"},{"name":"restless legs syndrome 8","type":"exact"},{"name":"restless legs syndrome, susceptibility to, 8","type":"exact"}],"termid":"MONDO:0014079","xrefs":{"Monarch":{"xref_id":"0014079"}}}


id: PBO:0086979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the type I protein phosphatase (PP1) Glc7p; Glc7p participates in the regulation of a variety of metabolic processes including mitosis and glycogen metabolism; in vitro evidence suggests Ypi1p is an inhibitor of Glc7p while in vivo evidence suggests it is an activator; overproduction causes decreased cellular content of glycogen; partial depletion causes lithium sensitivity, while overproduction confers lithium-tolerance","termid":"PBO:0086979"}


id: PBO:0003738
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IMP dehydrogenase Gua1 (predicted)","termid":"PBO:0003738"}


id: MONDO:0005284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of multiple sclerosis characterized by a progressive deterioration in neurologic function which is in contrast to the more typical relapsing remitting form. If the clinical course is free of distinct remissions, it is referred to as primary progressive multiple sclerosis. When the progressive decline is punctuated by acute exacerbations, it is referred to as progressive relapsing multiple sclerosis. The term secondary progressive multiple sclerosis is used when relapsing remitting multiple sclerosis evolves into the chronic progressive form. (From Ann Neurol 1994;36 Suppl:S73-S79; Adams et al., Principles of Neurology, 6th ed, pp903-914)","definition_xrefs":["MESH:D020528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple sclerosis","termid":"MONDO:0005301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005046"],"is_obsolete":false,"name":"chronic progressive multiple sclerosis","secondary_identifiers":["MEDGEN:140733","SCTID:230373008","EFO:0003840","UMLS:C0393665"],"termid":"MONDO:0005284","xrefs":{"Monarch":{"xref_id":"0005284"}}}


id: PBO:0062362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily V member 1","termid":"PBO:0062362"}


id: MONDO:0001002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pulmonary siderosis (obsolete MONDO:0001002)","termid":"MONDO:0001002","xrefs":{"Monarch":{"xref_id":"0001002"}}}


id: SO:1000078
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variation that decreases the rate a which transcription of the sequence occurs.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000078 sequence_variant_decreasing_rate_of_transcription (obsolete SO:1000078)","synonyms":[{"name":"mutation decreasing rate of transcription","type":"related"},{"name":"sequence variation decreasing rate of transcription","type":"exact"}],"termid":"SO:1000078"}


id: MONDO:1010630
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Chediak-Higashi syndrome that occurs in killer whale.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Chediak-Higashi syndrome, non-human animal","termid":"MONDO:1010070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Chediak-Higashi syndrome, killer whale","secondary_identifiers":["OMIA:000185-9733"],"termid":"MONDO:1010630","xrefs":{"Monarch":{"xref_id":"1010630"}}}


id: MONDO:0003424
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm composed of large cells with abundant eosinophilic granular cytoplasm. Representative examples include oncocytic adenomas of the thyroid gland, parathyroid gland, and pituitary gland.","definition_xrefs":["NCIT:C3759"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign endocrine neoplasm","termid":"MONDO:0000627"},{"relation_name":"is_a","term_name":"adenoma","termid":"MONDO:0004972"},{"relation_name":"is_a","term_name":"oncocytic neoplasm","termid":"MONDO:0010795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oncocytic adenoma","secondary_identifiers":["MEDGEN:307150","ICDO:8290/0","UMLS:C1510502","DOID:5389","EFO:1001079"],"synonyms":[{"name":"follicular adenoma, oxyphilic cell","type":"exact"},{"name":"oncocytic adenoma","type":"exact"},{"name":"oncocytoma","type":"exact"},{"name":"oxyphilic adenoma","type":"exact"}],"termid":"MONDO:0003424","xrefs":{"Monarch":{"xref_id":"0003424"}}}


id: PATO:0001356
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a cell by virtue of the bearer's ability to take on two or more different shapes during its life cycle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleomorphic","termid":"PATO:0001356"}


id: GO:0002027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency or rate of heart contraction.","definition_xrefs":["GOC:tb","GOC:dph","PMID:10358008"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart contraction","termid":"GO:0008016"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of heart rate","synonyms":[{"name":"cardiac chronotropy","type":"exact"},{"name":"regulation of heart contraction rate","type":"exact"},{"name":"regulation of rate of heart contraction","type":"exact"}],"termid":"GO:0002027"}


id: MONDO:0017385
data:
  {"annotated_genes":["SJAG_00321"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013389"}]},"cv_name":"mondo","definition":"A very rare severe form of epilepsy with poor prognosis that usually begins within a few weeks of birth. The seizure activity can appear in multiple locations in the brain or migrate from one region to another during an episode. It results in severe developmental delay.","definition_xrefs":["NCIT:C125387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neonatal epilepsy syndrome","termid":"MONDO:0020070"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00321":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"malignant migrating partial seizures of infancy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3494976","MEDGEN:782160","GARD:12919","NANDO:1200595","Orphanet:293181"],"synonyms":[{"name":"MMPEI","type":"exact"},{"name":"MMPSI","type":"exact"},{"name":"MPEI","type":"exact"},{"name":"MPSI","type":"broad"},{"name":"malignant migrating Partial seizures in infancy","type":"exact"},{"name":"malignant migrating partial epilepsy of infancy","type":"exact"},{"name":"migrating Partial seizures in infancy","type":"exact"},{"name":"migrating partial epilepsy of infancy","type":"exact"},{"name":"migrating partial seizures of infancy","type":"exact"}],"termid":"MONDO:0017385","terms_by_termid":{"MONDO:0013389":null},"xrefs":{"Monarch":{"xref_id":"0017385"}}}


id: GO:0048541
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of Peyer's patches over time, from their formation to the mature structure. Peyer's patches are typically found as nodules associated with gut epithelium with distinct internal structures including B- and T-zones for the activation of lymphocytes.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mucosa-associated lymphoid tissue development","termid":"GO:0048537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Peyer's patch development","synonyms":[{"name":"GALT development","type":"related"},{"name":"gut-associated lymphoid tissue development","type":"related"}],"termid":"GO:0048541"}


id: GO:0018304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The incorporation of iron into a 4Fe-4S iron-sulfur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulfide.","definition_xrefs":["RESID:AA0286"],"gene_count":0,"genotype_count":0,"name":"obsolete iron incorporation into iron-sulfur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulfide (obsolete GO:0018304)","synonyms":[{"name":"iron incorporation into iron-sulphur cluster via tris-L-cysteinyl-L-aspartato tetrairon tetrasulphide","type":"exact"}],"termid":"GO:0018304"}


id: PBO:0110101
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic amino acid transmembrane transporter","termid":"PBO:0110101"}


id: MONDO:0004185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of cystic structures lined by serous epithelial cells in a fibrotic stroma.","definition_xrefs":["NCIT:C40032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenofibroma","termid":"MONDO:0003464"},{"relation_name":"is_a","term_name":"serous cystadenofibroma","termid":"MONDO:0005182"},{"relation_name":"is_a","term_name":"ovarian serous adenofibroma","termid":"MONDO:0006340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian serous cystadenofibroma","secondary_identifiers":["UMLS:C0877572","DOID:7320","MEDGEN:167919"],"synonyms":[{"name":"ovarian serous cystadenofibroma","type":"exact"},{"name":"ovary serous cystadenofibroma","type":"exact"}],"termid":"MONDO:0004185","xrefs":{"Monarch":{"xref_id":"0004185"}}}


id: PBO:0030678
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vegetative_cell_shape","termid":"PBO:0030678"}


id: GO:0048488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A vesicle-mediated transport process, in which the synaptic vesicle membrane constituents are retrieved from the presynaptic membrane on the axon terminal after neurotransmitter secretion by exocytosis. Synaptic vesicle endocytosis can occur via clathrin-dependent and clathrin-independent mechanisms.","definition_xrefs":["GOC:bc","GOC:jid","PMID:20448150","GOC:lmg","PMID:26430111","GOC:aruk","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"presynaptic endocytosis","termid":"GO:0140238"},{"relation_name":"part_of","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0016192","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"synaptic vesicle endocytosis","secondary_identifiers":["GO:0008099"],"synonyms":[{"name":"synaptic vesicle retrieval","type":"related"}],"termid":"GO:0048488"}


id: PBO:0065484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome activator subunit 2 pseudogene 3","termid":"PBO:0065484"}


id: MONDO:0022983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteonecrosis","termid":"MONDO:0005380"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dieterich disease","secondary_identifiers":["GARD:204","UMLS:C2931124","MEDGEN:418997","MESH:C536172"],"synonyms":[{"name":"Dieterich disease","type":"exact"},{"name":"Dieterich's disease","type":"exact"},{"name":"avascular necrosis of the metacarpal head","type":"related"}],"termid":"MONDO:0022983","xrefs":{"Monarch":{"xref_id":"0022983"}}}


id: MONDO:0009406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cantu syndrome is a rare disorder characterized by congenital hypertrichosis, osteochondrodysplasia, cardiomegaly, and dysmorphism.","definition_xrefs":["Orphanet:1517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"hypertrichotic osteochondrodysplasia Cantu type","secondary_identifiers":["MESH:C535572","GARD:8585","OMIM:239850","MEDGEN:208647","SCTID:239087008","UMLS:C0795905","DOID:0060569"],"synonyms":[{"name":"Cantu syndrome","type":"exact"},{"name":"Craniofaciocardioskeletal syndrome","type":"related"},{"name":"hypertrichotic osteochondrodysplasia","type":"related"},{"name":"hypertrichotic osteochondrodysplasia (Cantu syndrome)","type":"exact"},{"name":"hypertrichotic osteochondrodysplasia, Cantu type","type":"related"}],"termid":"MONDO:0009406","xrefs":{"Monarch":{"xref_id":"0009406"}}}


id: GO:0070764
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is formed by the association of the Notch ligand Delta1 with the gamma-secretase complex.","definition_xrefs":["PMID:12794186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005886","GO:0005575"],"is_obsolete":false,"name":"gamma-secretase-Delta1 complex","termid":"GO:0070764"}


id: MONDO:0003583
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete atypical lipomatous tumor (obsolete MONDO:0003583)","termid":"MONDO:0003583","xrefs":{"Monarch":{"xref_id":"0003583"}}}


id: GO:0102056
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3'-phosphonato-5'-adenylyl sulfate + an 11-hydroxyjasmonate = adenosine 3',5'-bismonophosphate + H+ + an 11-hydroxyjasmonate sulfate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 11-hydroxyjasmonate sulfotransferase activity (obsolete GO:0102056)","termid":"GO:0102056"}


id: PBO:0086267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that stimulates the activity of serine palmitoyltransferase;  involved in sphingolipid biosynthesis; Lcb1p and Lcb2p are the two components of serine palmitoyltransferase","termid":"PBO:0086267"}


id: GO:0043176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an amine, a weakly basic organic compound that contains an amino or a substituted amino group.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"amine binding","termid":"GO:0043176"}


id: MONDO:0000694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by depressions that recur annually at the same time each year, usually during the winter months. Other symptoms include anxiety, irritability, decreased energy, increased appetite (carbohydrate cravings), increased duration of sleep, and weight gain. sad (seasonal affective disorder) can be treated by daily exposure to bright artificial lights (phototherapy), during the season of recurrence.","definition_xrefs":["MESH:D016574"],"direct_ancestors":[{"relation_name":"is_a","term_name":"depressive disorder","termid":"MONDO:0002050"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"seasonal affective disorder","secondary_identifiers":["ICD9:296.99","MEDGEN:38984","DOID:0060167","UMLS:C0085159","SCTID:247803002"],"synonyms":[{"name":"SADS","type":"broad"},{"name":"sad","type":"broad"},{"name":"seasonal affective disorder","type":"exact"},{"name":"winter depression","type":"exact"}],"termid":"MONDO:0000694","xrefs":{"Monarch":{"xref_id":"0000694"}}}


id: MONDO:0012388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 11, autosomal dominant","secondary_identifiers":["MESH:C566490","OMIM:609994","UMLS:C1864941","MEDGEN:355874"],"synonyms":[{"name":"MYP11","type":"exact"},{"name":"myopia 11","type":"exact"},{"name":"myopia 11, autosomal dominant","type":"exact"}],"termid":"MONDO:0012388","xrefs":{"Monarch":{"xref_id":"0012388"}}}


id: PBO:0071084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 86","termid":"PBO:0071084"}


id: PBO:0044260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR pseudogene 2","termid":"PBO:0044260"}


id: PBO:0042075
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 144B, pseudogene","termid":"PBO:0042075"}


id: MONDO:0009802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteodysplasty, precocious, of Danks, Mayne, and Kozlowski","secondary_identifiers":["MEDGEN:337989","OMIM:259270","UMLS:C1850185","MESH:C564922"],"synonyms":[{"name":"Danks Mayne Kozlowski precocious osteodysplasty","type":"related"},{"name":"osteodysplasty precocious of Danks Mayne and Kozlowski","type":"related"},{"name":"osteodysplasty, precocious, of Danks, Mayne, and Kozlowski","type":"exact"}],"termid":"MONDO:0009802","xrefs":{"Monarch":{"xref_id":"0009802"}}}


id: PBO:0086786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies; analysis of HA-tagged protein suggests a membrane localization","termid":"PBO:0086786"}


id: GO:1900474
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of mating type switching by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:8625409","GOC:TermGenie","GOC:dgf","PMID:8625408"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of mating type switching by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:1900474)","termid":"GO:1900474"}


id: MONDO:0014742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Parkinson disease in which the cause of the disease is a mutation in the CHCHD2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"late-onset Parkinson disease","termid":"MONDO:0008199"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Parkinson disease 22, autosomal dominant","secondary_identifiers":["MEDGEN:907886","OMIM:616710","DOID:0080504","UMLS:C4225238"],"synonyms":[{"name":"CHCHD2 Parkinson disease","type":"exact"},{"name":"PARK22","type":"exact"},{"name":"Parkinson disease 22, autosomal dominant","type":"exact"},{"name":"Parkinson disease 22, autosomal dominant; PARK22","type":"exact"},{"name":"Parkinson disease caused by mutation in CHCHD2","type":"exact"}],"termid":"MONDO:0014742","xrefs":{"Monarch":{"xref_id":"0014742"}}}


id: GO:0044615
data:
  {"annotated_genes":["SJAG_03300","SJAG_01584","SJAG_03593","SJAG_02274","SJAG_04645","SJAG_05243"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[61723,78017,91003,96991,116949,117610],"is_not":false,"summary":null,"term":"GO:0044615"}]},"cv_name":"cellular_component","definition":"A filamentous, cage-like assembly on the nuclear face of the nuclear pore complex (NPC). In S. cerevisiae, Mlp1p and Mlp2p are two major components of the NPC nuclear basket. In vertebrates, Tpr is a major component.","definition_xrefs":["PMID:19524430","PMID:18046406","PMID:20947011","GOC:dgf","PMID:22419078"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"part_of","term_name":"nuclear pore","termid":"GO:0005643"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01584":null,"SJAG_02274":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_04645":null,"SJAG_05243":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005643"},{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005634","GO:0005575","GO:0005643"],"is_obsolete":false,"name":"nuclear pore nuclear basket","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0044615","terms_by_termid":{"GO:0044615":null}}


id: GO:0098695
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any inositol 1,4,5-trisphosphate receptor activity that is involved in regulation of postsynaptic cytosolic calcium ion concentration.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol 1,4,5-trisphosphate-gated calcium channel activity","termid":"GO:0005220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"inositol 1,4,5-trisphosphate receptor activity involved in regulation of postsynaptic cytosolic calcium levels","synonyms":[{"name":"IP3 receptor activity involved in regulation of postsynaptic cytosolic calcium levels","type":"exact"}],"termid":"GO:0098695"}


id: MONDO:0004231
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the breast parenchyma and is characterized by the presence of spindle-shaped malignant cells.","definition_xrefs":["NCIT:C40358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell breast carcinoma","termid":"MONDO:0006056"},{"relation_name":"is_a","term_name":"sarcomatoid squamous cell carcinoma","termid":"MONDO:0021663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spindle cell variant squamous cell breast carcinoma","secondary_identifiers":["ONCOTREE:MASCC","UMLS:C1519487","MEDGEN:274270","DOID:7460"],"synonyms":[{"name":"metaplastic adenocarcinoma with spindle cell differentiation","type":"related"},{"name":"squamous cell breast carcinoma, spindle cell variant","type":"exact"}],"termid":"MONDO:0004231","xrefs":{"Monarch":{"xref_id":"0004231"}}}


id: MONDO:0030924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"proteosome-associated autoinflammatory syndrome","termid":"MONDO:0009726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0006025"],"is_obsolete":false,"name":"proteasome-associated autoinflammatory syndrome 5","secondary_identifiers":["MEDGEN:1779962","DOID:0060919","OMIM:619175","GARD:18448","UMLS:C5543027"],"synonyms":[{"name":"PRAAS5","type":"exact"},{"name":"proteasome-associated autoinflammatory syndrome 5","type":"exact"}],"termid":"MONDO:0030924","xrefs":{"Monarch":{"xref_id":"0030924"}}}


id: PBO:0059807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 33","termid":"PBO:0059807"}


id: GO:0033788
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2R,3S)-catechin + NADP+ + H2O = 2,3-trans-3,4-cis-leucocyanidin + NADPH + H+.","definition_xrefs":["EC:1.17.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, NAD or NADP as acceptor","termid":"GO:0016726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"leucoanthocyanidin reductase activity","secondary_identifiers":["RHEA:10616","MetaCyc:RXN-1484"],"synonyms":[{"name":"(2R,3S)-catechin:NADP+ 4-oxidoreductase activity","type":"related"},{"name":"leucocyanidin reductase activity","type":"related"}],"termid":"GO:0033788"}


id: PBO:0079169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocator protein 2","termid":"PBO:0079169"}


id: PBO:0079766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UFL1 antisense RNA 1","termid":"PBO:0079766"}


id: RO:HOM0000014
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Structural homology that involves complex structures from which only a fraction of the elements that can be isolated are separately homologous.","definition_xrefs":["ISBN:0123195837","ISBN:978-0471984931"],"direct_ancestors":[{"relation_name":"is_a","term_name":"in_structural_homology_relationship_with","termid":"RO:HOM0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_partial_homology_relationship_with","synonyms":[{"name":"fractional homology","type":"exact"},{"name":"mixed homology","type":"related"},{"name":"modular homology","type":"related"},{"name":"partial correspondence","type":"related"},{"name":"partial homologous to","type":"exact"},{"name":"percent homology","type":"related"},{"name":"segmental homology","type":"exact"}],"termid":"RO:HOM0000014"}


id: FYPO:0006597
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of one or more cell wall organization RNAs measured in a cell is higher than normal (i.e. higher than observed in wild-type cells). Cell wall organization RNAs are transcribed from genes whose products are involved in assembly, alteration, or disassembly of the cell wall.","definition_xrefs":["PMID:29878109","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"increased level of cell wall organization gene mRNA during vegetative growth","synonyms":[{"name":"increased cell wall organization gene mRNA accumulation during vegetative growth","type":"related"},{"name":"increased level of cell wall organization gene RNA during vegetative growth","type":"exact"},{"name":"increased level of cell wall organization gene mRNA during mitotic cell cycle","type":"related"},{"name":"increased level of cell wall organization gene transcripts during vegetative growth","type":"exact"},{"name":"increased level of cell wall remodeling gene mRNA during vegetative growth","type":"exact"}],"termid":"FYPO:0006597"}


id: MONDO:0002447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant tumor arising from the epithelium that lines the cavity of the uterine body. The vast majority of endometrial carcinomas are adenocarcinomas; squamous cell and adenosquamous carcinomas represent a minority of the cases. Endometrioid adenocarcinoma is the most frequently seen variant of endometrial adenocarcinoma. Uterine bleeding is an initial clinical sign. The prognosis depends on the stage of the tumor, the depth of myometrial wall invasion, and the degree of differentiation.","definition_xrefs":["NCIT:C7558"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine carcinoma","termid":"MONDO:0005213"},{"relation_name":"is_a","term_name":"endometrial cancer","termid":"MONDO:0011962"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"endometrial carcinoma","secondary_identifiers":["ONCOTREE:UCEC","UMLS:C0476089","EFO:1001512","icd11.foundation:1123821211","HP:0012114","MEDGEN:96903","DOID:2871","SCTID:254878006"],"synonyms":[{"name":"carcinoma of endometrium","type":"exact"},{"name":"carcinoma of the endometrium","type":"exact"},{"name":"carcinoma, endometrial, malignant","type":"exact"},{"name":"endometrial cancer","type":"broad"},{"name":"endometrial carcinoma","type":"exact"},{"name":"endometrial carcinoma (disease)","type":"exact"},{"name":"endometrium carcinoma","type":"exact"}],"termid":"MONDO:0002447","xrefs":{"Monarch":{"xref_id":"0002447"}}}


id: PR:O94267
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A FACT complex subunit SPT16 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FACT complex subunit spt16 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP8B7.19","secondary_identifiers":["UniProtKB:O94267"],"synonyms":[{"name":"Spom972h-SUPT16H","type":"exact"},{"name":"facilitates chromatin transcription complex subunit spt16 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94267"}


id: MONDO:0971015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"MHC class II deficiency","termid":"MONDO:0008855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"MHC class II deficiency 4","secondary_identifiers":["UMLS:C1859537","OMIM:620817","MEDGEN:347176"],"termid":"MONDO:0971015","xrefs":{"Monarch":{"xref_id":"0971015"}}}


id: GO:0035509
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of myosin-light-chain-phosphatase activity.","definition_xrefs":["GOC:go_curators","GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of myosin-light-chain-phosphatase activity (obsolete GO:0035509)","termid":"GO:0035509"}


id: GO:0023035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by the binding of the cell surface receptor CD40 to one of its physiological ligands, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:mtg_signal","GOC:signaling","PMID:11348017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"CD40 signaling pathway","synonyms":[{"name":"CD40 signalling pathway","type":"exact"}],"termid":"GO:0023035"}


id: GO:0052125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism on or near its host organism in response to physical parameters involved in energy generation, such as light, oxygen, and oxidizable substrates. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete energy taxis on or near host (obsolete GO:0052125)","termid":"GO:0052125"}


id: PBO:0031386
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_glucan_synthesis","termid":"PBO:0031386"}


id: PBO:0059995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 15","termid":"PBO:0059995"}


id: GO:0030152
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a bacteriocin, any of a heterogeneous group of polypeptide antibiotics that are secreted by certain bacterial strains and are able to kill cells of other susceptible (frequently related) strains after adsorption at specific receptors on the cell surface. They include the colicins, and their mechanisms of action vary.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin biosynthetic process","termid":"GO:0009403"},{"relation_name":"is_a","term_name":"peptide antibiotic biosynthetic process","termid":"GO:0030651"},{"relation_name":"is_a","term_name":"bacteriocin metabolic process","termid":"GO:0046224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"bacteriocin biosynthetic process","synonyms":[{"name":"bacteriocin anabolism","type":"exact"},{"name":"bacteriocin biosynthesis","type":"exact"},{"name":"bacteriocin formation","type":"exact"},{"name":"bacteriocin synthesis","type":"exact"}],"termid":"GO:0030152"}


id: PBO:0039042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AGBL carboxypeptidase 4","termid":"PBO:0039042"}


id: PBO:0071174
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 15","termid":"PBO:0071174"}


id: GO:0003222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the trabecular cardiac ventricle muscle are generated and organized.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ventricular cardiac muscle tissue morphogenesis","termid":"GO:0055010"},{"relation_name":"is_a","term_name":"heart trabecula morphogenesis","termid":"GO:0061384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ventricular trabecula myocardium morphogenesis","synonyms":[{"name":"trabecula carnea morphogenesis","type":"related"}],"termid":"GO:0003222"}


id: PBO:0027614
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_vegetative_cell_phenotype_following_normal_mitosis","termid":"PBO:0027614"}


id: PBO:0065856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB13, member RAS oncogene family","termid":"PBO:0065856"}


id: GO:0048762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a mesenchymal cell. A mesenchymal cell is a loosely associated cell that is part of the connective tissue in an organism. Mesenchymal cells give rise to more mature connective tissue cell types.","definition_xrefs":["GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell differentiation","termid":"GO:0048762"}


id: MONDO:0014702
data:
  {"annotated_genes":["SJAG_00660","SJAG_03457"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86978,86979],"is_not":false,"summary":null,"term":"MONDO:0014702"}]},"cv_name":"mondo","definition":"Any autosomal recessive complex spastic paraplegia in which the cause of the disease is a mutation in the ALDH18A1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"},{"relation_name":"is_a","term_name":"P5CS deficiency","termid":"MONDO:0100126"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00660":null,"SJAG_03457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005559","MONDO:0005066"],"is_obsolete":false,"name":"autosomal recessive complex spastic paraplegia type 9B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616586","Orphanet:447760","GARD:17770","MEDGEN:1800403","UMLS:C5568980","DOID:0110825"],"synonyms":[{"name":"ALDH18A1 autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"AR-SPG9B","type":"exact"},{"name":"SPG9B","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in ALDH18A1","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia type 9B","type":"exact"},{"name":"autosomal recessive spastic paraplegia 9B","type":"exact"},{"name":"hereditary spastic paraplegia 9B","type":"related"},{"name":"hereditary spastic paraplegia type 9B","type":"exact"},{"name":"spastic paraplegia 9B, autosomal recessive","type":"related"}],"termid":"MONDO:0014702","terms_by_termid":{"MONDO:0014702":null},"xrefs":{"Monarch":{"xref_id":"0014702"}}}


id: GO:0010533
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency or rate of activation of JAK (Janus Activated Kinase) protein. The activation of JAK protein is the process of introducing a phosphate group to a tyrosine residue of a JAK (Janus Activated Kinase) protein, thereby activating it.","definition_xrefs":["PMID:17190829","GOC:dph","GOC:tb","PMID:9135582"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of activation of Janus kinase activity (obsolete GO:0010533)","synonyms":[{"name":"regulation of activation of JAK protein","type":"exact"},{"name":"regulation of activation of JAK1 kinase activity","type":"narrow"},{"name":"regulation of activation of JAK1 protein","type":"narrow"},{"name":"regulation of activation of JAK2 kinase activity","type":"narrow"},{"name":"regulation of activation of JAK2 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of JAK protein","type":"related"},{"name":"regulation of tyrosine phosphorylation of JAK1 protein","type":"narrow"},{"name":"regulation of tyrosine phosphorylation of JAK2 protein","type":"narrow"}],"termid":"GO:0010533"}


id: GO:0090505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of one cell sheet over other cells involved in wound healing.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epiboly","termid":"GO:0090504"},{"relation_name":"part_of","term_name":"wound healing","termid":"GO:0042060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epiboly involved in wound healing","termid":"GO:0090505"}


id: MONDO:0013076
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 7","secondary_identifiers":["UMLS:C2751802","MEDGEN:416637","OMIM:613003"],"synonyms":[{"name":"ADHD7","type":"exact"},{"name":"attention Deficit-hyperactivity disorder, susceptibility to, type 7","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 7","type":"exact"},{"name":"susceptibility to attention deficit-hyperactivity disorder 7","type":"related"}],"termid":"MONDO:0013076","xrefs":{"Monarch":{"xref_id":"0013076"}}}


id: PBO:0116472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing or surveillance protein, human NSRP1 ortholog","termid":"PBO:0116472"}


id: PBO:0057002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 95","termid":"PBO:0057002"}


id: PBO:0089806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrestin-related substrate adaptor Any2","termid":"PBO:0089806"}


id: MOD:01387
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-methyl-L-threonine.","definition_xrefs":["PubMed:7328054","RESID:AA0464"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated threonine","termid":"MOD:01803"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"O-methyl-L-threonine","synonyms":[{"name":"(2S,3R)-2-amino-3-methoxybutanoic acid","type":"exact"},{"name":"MOD_RES O-methylthreonine","type":"exact"},{"name":"O-methyl threonine","type":"exact"},{"name":"O-methyl-L-threonine","type":"exact"},{"name":"OMeThr","type":"exact"},{"name":"threonine methyl ether","type":"exact"}],"termid":"MOD:01387"}


id: PBO:0028857
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_splicing_of_mRNA_introns_with_low_A/U_content_and_polypyrimidine_tracts_distal_to_branch_site","termid":"PBO:0028857"}


id: GO:0010742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a monocyte acquires the specialized features of a foam cell. A foam cell is a type of cell containing lipids in small vacuoles and typically seen in atherosclerotic lesions, as well as other conditions.","definition_xrefs":["GOC:add","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"foam cell differentiation","termid":"GO:0090077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"macrophage derived foam cell differentiation","termid":"GO:0010742"}


id: GO:0032762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that contributes to cytokine production by a mast cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid leukocyte cytokine production","termid":"GO:0061082"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"mast cell cytokine production","termid":"GO:0032762"}


id: PBO:0074045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 27","termid":"PBO:0074045"}


id: FYPO:0004337
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitochondrion does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"},{"relation_name":"is_a","term_name":"abnormal protein localization to mitochondrion","termid":"FYPO:0004336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to mitochondrion","synonyms":[{"name":"abolished protein localisation to mitochondrion","type":"exact"},{"name":"abolished protein localization to mitochondrion during mitotic cell cycle","type":"related"},{"name":"protein absent from mitochondrion","type":"related"},{"name":"protein localization to mitochondrion abolished","type":"exact"},{"name":"protein localization to mitochondrion abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0004337"}


id: GO:0055131
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C3HC4-type zinc finger domain of a protein. The C3HC4-type zinc finger is a variant of RING finger, is a cysteine-rich domain of 40 to 60 residues that coordinates two zinc ions, and has the consensus sequence: C-X2-C-X(9-39)-C-X(1-3)-H-X(2-3)-C-X2-C-X(4-48)-C-X2-C, where X is any amino acid. Many proteins containing a C3HC4-type RING finger play a key role in the ubiquitination pathway.","definition_xrefs":["GOC:amm","InterPro:IPR001841","InterPro:IPR018957"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"C3HC4-type RING finger domain binding","termid":"GO:0055131"}


id: PBO:0083589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; YHR212C has a paralog, YAR060C, that arose from a segmental duplication","termid":"PBO:0083589"}


id: PATO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A physical quality inhering in a bearer by virtue the bearer's disposition to having an affinity for water; it is readily absorbing or dissolving in water.","definition_xrefs":["answers.com:answers.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"physical quality","termid":"PATO:0001018"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrophilicity","termid":"PATO:0001886"}


id: PBO:0082735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; required for its structural integrity and catalytic activity, involved in transcriptional silencing and required for sporulation; relocalizes to the cytosol in response to hypoxia; cells defective in SDS3 display pleiotropic phenotypes","termid":"PBO:0082735"}


id: MONDO:0044246
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Voluntary nystagmus is a rapid to-and-fro synchronous movement of the eyes that is initiated and maintained by conscious effort. Voluntary nystagmus has a frequency of 10-25 Hz, with an amplitude of up to 6 degrees, and can be maintained for up to 35 seconds. It usually has its first appearance between ages 8 to 15 years. It can be produced in both light and darkness, without fixation, at all eye positions, and even with closed eyes. It is accompanied by oscillopsia with visual blurring (summary by {1:Aschoff et al., 1976}).","definition_xrefs":["OMIM:164170"],"gene_count":0,"genotype_count":0,"name":"obsolete nystagmus, voluntary (obsolete MONDO:0044246)","synonyms":[{"name":"NYSTAGMUS, voluntary","type":"related"}],"termid":"MONDO:0044246","xrefs":{"Monarch":{"xref_id":"0044246"}}}


id: FYPO:0000559
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the rate, or speed, of re-entry into the mitotic cell cycle after pheromone arrest is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal re-entry into mitotic cell cycle after pheromone arrest","termid":"FYPO:0000555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000298","FYPO:0001985","FYPO:0000631"],"is_obsolete":false,"name":"increased rate of re-entry into mitotic cell cycle after pheromone arrest","synonyms":[{"name":"increased rate of recovery from pheromone-induced cell cycle arrest","type":"exact"},{"name":"recovery from pheromone-induced cell cycle arrest: increased rate","type":"related"}],"termid":"FYPO:0000559"}


id: FYPO:0000998
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell becomes elongated, i.e. has a greater length and length:diameter ratio than normal, when the cell is subject to nitrogen starvation.","definition_xrefs":["PMID:19366728","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"elongated cell","termid":"FYPO:0000017"},{"relation_name":"is_a","term_name":"abnormal cell morphology during nitrogen starvation","termid":"FYPO:0000995"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000005","FYPO:0000002"],"is_obsolete":false,"name":"elongated cell during nitrogen starvation","synonyms":[{"name":"cell morphology, elongated cell during nitrogen starvation","type":"exact"},{"name":"elongated cell during nitrogen depletion","type":"exact"},{"name":"elongated cell during nitrogen deprivation","type":"exact"},{"name":"gain of polarization during quiescence","type":"related"},{"name":"long cell during nitrogen starvation","type":"exact"}],"termid":"FYPO:0000998"}


id: GO:1990737
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of endoplasmic reticulum stress caused by a manganese stimulus.","definition_xrefs":["GOC:PARL","GOC:bf","PMID:23934647"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to endoplasmic reticulum stress","termid":"GO:0034976"},{"relation_name":"is_a","term_name":"cellular response to chemical stress","termid":"GO:0062197"},{"relation_name":"is_a","term_name":"cellular response to manganese ion","termid":"GO:0071287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to manganese-induced endoplasmic reticulum stress","synonyms":[{"name":"manganese-induced ER stress response","type":"exact"},{"name":"response to Mn-induced ER stress","type":"exact"},{"name":"response to manganese-induced ER stress","type":"exact"}],"termid":"GO:1990737"}


id: GO:0031696
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an alpha-2C adrenergic receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"alpha-2C adrenergic receptor binding","synonyms":[{"name":"alpha-2C adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031696"}


id: FYPO:0002728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and in which the nucleus is larger than normal, when the cell is in a culture entering stationary phase. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PMID:2743431","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable swollen elongated cell with enlarged nucleus","termid":"FYPO:0002083"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0000004","FYPO:0002403","FYPO:0005447","FYPO:0000032","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"inviable swollen elongated cell with enlarged nucleus upon entry into stationary phase","synonyms":[{"name":"lethal; swollen elongated cell with enlarged nucleus upon entry into stationary phase","type":"exact"}],"termid":"FYPO:0002728"}


id: PBO:0082208
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-1,3-mannosyltransferase; adds the fourth and fifth alpha-1,3-linked mannose residues to O-linked glycans during protein O-glycosylation","termid":"PBO:0082208"}


id: PBO:0017440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_transcription_of","termid":"PBO:0017440"}


id: MONDO:0012285
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 2","secondary_identifiers":["UMLS:C1836118","MEDGEN:322827","OMIM:609470","GARD:15460"],"synonyms":[{"name":"LVNC2","type":"exact"},{"name":"left ventricular noncompaction 2","type":"exact"}],"termid":"MONDO:0012285","xrefs":{"Monarch":{"xref_id":"0012285"}}}


id: GO:0080160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of selenate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:18761637"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"selenate transport","termid":"GO:0080160"}


id: PBO:0073612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIAH2 antisense RNA 1","termid":"PBO:0073612"}


id: MONDO:0031632
data:
  {"annotated_genes":["SJAG_01058","SJAG_04085"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87574],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0800438"},{"annotations":[87737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100217"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01058":null,"SJAG_04085":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay with short stature, dysmorphic facial features, and sparse hair","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIMPS:616901","MEDGEN:934768","DOID:0070476","UMLS:C4310801"],"termid":"MONDO:0031632","terms_by_termid":{"MONDO:0100217":null,"MONDO:0800438":null},"xrefs":{"Monarch":{"xref_id":"0031632"}}}


id: MONDO:0018949
data:
  {"annotated_genes":["SJAG_04567","SJAG_03815","SJAG_02919","SJAG_00044","SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87238,87239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008050"},{"annotations":[88189,88187,88188],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012130"},{"annotations":[88085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014877"}]},"cv_name":"mondo","definition":"Distal myopathy refers to a group of muscle diseases which share the clinical pattern of predominant weakness and atrophy beginning in the feet and/or hands.","definition_xrefs":["Orphanet:599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00044":null,"SJAG_02431":null,"SJAG_02919":null,"SJAG_03703":null,"SJAG_03815":null,"SJAG_04567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"distal myopathy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C84675","OMIMPS:160500","MEDGEN:155541","icd11.foundation:596283352","UMLS:C0751336","DOID:11720","NANDO:1200216","GARD:18699","SCTID:58795000"],"synonyms":[{"name":"Miyoshi muscular dystrophy","type":"narrow"},{"name":"distal muscular dystrophy","type":"exact"},{"name":"distal myopathy","type":"exact"}],"termid":"MONDO:0018949","terms_by_termid":{"MONDO:0008050":null,"MONDO:0012130":null,"MONDO:0014877":null},"xrefs":{"Monarch":{"xref_id":"0018949"}}}


id: MONDO:0005382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of bone that initially results in the excessive resorption of bone (by osteoclasts) followed by the replacement of normal bone marrow with vascular and fibrous tissue.","definition_xrefs":["NCIT:C3292"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperostosis","termid":"MONDO:0002185"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"metabolic bone disorder","termid":"MONDO:0800486"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone Paget disease","secondary_identifiers":["SCTID:2089002","DOID:5408","OMIMPS:167250","Orphanet:280110","UMLS:C0029401","EFO:0004261","ICD10CM:M88","MEDGEN:10493"],"synonyms":[{"name":"Paget disease of bone","type":"exact"},{"name":"Paget's bone disease","type":"exact"},{"name":"Paget's disease","type":"related"},{"name":"Paget's disease of bone","type":"exact"},{"name":"Paget's disease of the bone","type":"exact"},{"name":"Pagets disease (bone)","type":"exact"},{"name":"bone Paget disease","type":"exact"},{"name":"bone Paget's disease","type":"exact"},{"name":"familial Paget's disease of bone","type":"related"},{"name":"osseous Paget's disease","type":"exact"},{"name":"osteitis deformans","type":"exact"}],"termid":"MONDO:0005382","xrefs":{"Monarch":{"xref_id":"0005382"}}}


id: FYPO:0008098
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the oscillations of homologous chromosomes which occurs at meiotic metaphase I is reduced.","definition_xrefs":["PMID:33529549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal homologous chromosome segregation","termid":"FYPO:0004159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0000631"],"is_obsolete":false,"name":"abnormal chromosome oscillation at meiotic metaphase I","synonyms":[{"name":"aberrant chromosome oscillation at meiotic metaphase I","type":"exact"}],"termid":"FYPO:0008098"}


id: PBO:0091327
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae CMD1","termid":"PBO:0091327"}


id: PBO:0036287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G-patch RNA-binding protein, involved in splicing (predicted)","termid":"PBO:0036287"}


id: PBO:0067853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 155","termid":"PBO:0067853"}


id: MONDO:0012930
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive severe congenital neutropenia","termid":"MONDO:0028226"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive severe congenital neutropenia due to G6PC3 deficiency","secondary_identifiers":["MEDGEN:414066","DOID:0112136","GARD:17511","OMIM:612541","Orphanet:331176","UMLS:C2751630"],"synonyms":[{"name":"Dursun syndrome","type":"related"},{"name":"SCN4","type":"exact"},{"name":"autosomal recessive severe congenital neutropenia due to G6PC3 deficiency","type":"exact"},{"name":"neutropenia, severe congenital 4, autosomal recessive","type":"exact"},{"name":"neutropenia, severe congenital, 4, autosomal recessive","type":"related"},{"name":"pulmonary arterial hypertension, leukopenia, and atrial septal defect","type":"related"},{"name":"severe congenital neutropenia type 4","type":"exact"},{"name":"severe congenital neutropenia-pulmonary hypertension-superficial venous angiectasis syndrome","type":"exact"}],"termid":"MONDO:0012930","xrefs":{"Monarch":{"xref_id":"0012930"}}}


id: PBO:0061839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opioid growth factor receptor pseudogene 1","termid":"PBO:0061839"}


id: RO:0002512
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x is the ribosomal translation of y if and only if a ribosome reads x through a series of triplet codon-amino acid adaptor activities (GO:0030533) and produces y","direct_ancestors":[{"relation_name":"is_a","term_name":"genomically_related_to","termid":"RO:0002330"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal_translation_of","termid":"RO:0002512"}


id: MONDO:0005410
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute graft vs. host disease (obsolete MONDO:0005410)","termid":"MONDO:0005410","xrefs":{"Monarch":{"xref_id":"0005410"}}}


id: GO:0006113
data:
  {"annotated_genes":["SJAG_04842","SJAG_03822","SJAG_02734","SJAG_03370","SJAG_01414","SJAG_03743","SJAG_00240","SJAG_05006"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99268,99269],"is_not":false,"summary":null,"term":"GO:0006113"},{"annotations":[116672,100744,116671,100743,90517],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019655"},{"annotations":[98586],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2001172"}]},"cv_name":"biological_process","definition":"The catabolic process that includes oxidation-reduction reactions for the generation of adenosine triphosphate (ATP) and primarily uses organic compounds as both electron donors and acceptors, without consumption of oxygen.","definition_xrefs":["PMID:25617754","PMID:38821505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"energy derivation by oxidation of organic compounds","termid":"GO:0015980"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_02734":null,"SJAG_03370":null,"SJAG_03743":null,"SJAG_03822":null,"SJAG_04842":null,"SJAG_05006":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"fermentation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:Fermentation","Wikipedia:Fermentation_(biochemistry)"],"termid":"GO:0006113","terms_by_termid":{"GO:0006113":null,"GO:0019655":null,"GO:2001172":null}}


id: GO:0004312
data:
  {"annotated_genes":["SJAG_04972","SJAG_04107"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[59037,60577],"is_not":false,"summary":null,"term":"GO:0004312"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + n malonyl-CoA + 2n NADPH + 2n H+ = long-chain fatty acid + n+1 CoA + n CO2 + 2n NADP+.","definition_xrefs":["EC:2.3.1.85"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016746"],"is_obsolete":false,"name":"fatty acid synthase activity","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["MetaCyc:FATTY-ACID-SYNTHASE-RXN","Reactome:R-HSA-163756","Reactome:R-HSA-75872","RHEA:14993"],"synonyms":[{"name":"acyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing and thioester-hydrolysing)","type":"related"},{"name":"fatty-acid synthase activity","type":"exact"}],"termid":"GO:0004312","terms_by_termid":{"GO:0004312":null}}


id: PBO:0029127
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_vacuole_fusion","termid":"PBO:0029127"}


id: GO:0003841
data:
  {"annotated_genes":["SJAG_01957","SJAG_04041","SJAG_04792"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73616,78772,92043],"is_not":false,"summary":null,"term":"GO:0003841"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 1-acyl-sn-glycerol-3-phosphate = CoA + 1,2-diacyl-sn-glycerol-3-phosphate.","definition_xrefs":["EC:2.3.1.51","GOC:ab"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"},{"relation_name":"is_a","term_name":"lysophosphatidic acid acyltransferase activity","termid":"GO:0042171"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01957":null,"SJAG_04041":null,"SJAG_04792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016746"],"is_obsolete":false,"name":"1-acylglycerol-3-phosphate O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:RXN-1623","Reactome:R-HSA-1482539","Reactome:R-HSA-1482689","Reactome:R-HSA-75885","Reactome:R-HSA-1482894","Reactome:R-HSA-1482667","Reactome:R-HSA-1482598","Reactome:R-HSA-8849345","RHEA:19709","Reactome:R-HSA-1482547","GO:0004469","Reactome:R-HSA-1482636","Reactome:R-HSA-1482548"],"synonyms":[{"name":"1-acyl-sn-glycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol 3-phosphate acyltransferase activity","type":"related"},{"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase activity","type":"exact"},{"name":"1-acylglycero-3-phosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerolphosphate acyltransferase activity","type":"related"},{"name":"1-acylglycerophosphate acyltransferase activity","type":"related"},{"name":"acyl-CoA:1-acyl-sn-glycerol-3-phosphate 2-O-acyltransferase activity","type":"related"},{"name":"lysophosphatidate acyltransferase activity","type":"exact"},{"name":"lysophosphatidic acid-acyltransferase activity","type":"related"}],"termid":"GO:0003841","terms_by_termid":{"GO:0003841":null}}


id: GO:0032935
data:
  {"annotated_genes":["SJAG_03715"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[116966],"is_not":false,"summary":null,"term":"GO:0032935"}]},"cv_name":"molecular_function","definition":"Binding to and responding, e.g. by conformational change, to changes in the cellular level of a sterol.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid sensor activity","termid":"GO:0106254"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03715":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0140299","GO:0098772"],"is_obsolete":false,"name":"sterol sensor activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"sterol sensing activity","type":"exact"},{"name":"sterol-sensing domain","type":"narrow"}],"termid":"GO:0032935","terms_by_termid":{"GO:0032935":null}}


id: FYPO:0000056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which mitochondria have fused into fewer and larger structures than normal, or failed to undergo fission.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitochondrial morphology","termid":"FYPO:0000359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320"],"is_obsolete":false,"name":"mitochondria fused","synonyms":[{"name":"fused mitochondria","type":"exact"},{"name":"mitochondria fused during mitotic cell cycle","type":"related"},{"name":"mitochondria fused during vegetative growth","type":"exact"}],"termid":"FYPO:0000056"}


id: PBO:0069846
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1132, pseudogene","termid":"PBO:0069846"}


id: GO:0016457
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The aggregation, arrangement and bonding together of proteins on DNA to form the complex that mediates dosage compensation on the X chromosome of the heterogametic sex, ultimately resulting in a two-fold increase in transcription from this chromosome. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete dosage compensation complex assembly involved in dosage compensation by hyperactivation of X chromosome (obsolete GO:0016457)","synonyms":[{"name":"dosage compensation complex assembly during dosage compensation by hyperactivation of X chromosome","type":"related"}],"termid":"GO:0016457"}


id: FYPO:0003163
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a nuclease activity is abnormal. All nuclease activities may be abnormal, or a specific nuclease activity may be assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000652","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal nuclease activity","termid":"FYPO:0003163"}


id: GO:0003881
data:
  {"annotated_genes":["SJAG_00999"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78620],"is_not":false,"summary":null,"term":"GO:0003881"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: myo-inositol + CDP-diacylglycerol = 1-phosphatidyl-1D-myo-inositol + CMP + H+.","definition_xrefs":["EC:2.7.8.11","RHEA:11580"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CDP-alcohol phosphatidyltransferase activity","termid":"GO:0017169"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00999":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0016780","GO:0003674"],"is_obsolete":false,"name":"CDP-diacylglycerol-inositol 3-phosphatidyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1482976","MetaCyc:2.7.8.11-RXN","KEGG_REACTION:R01802"],"synonyms":[{"name":"CDP diglyceride-inositol phosphatidyltransferase activity","type":"related"},{"name":"CDP-DG:inositol transferase activity","type":"related"},{"name":"CDP-diacylglycerol--inositol phosphatidyltransferase activity","type":"related"},{"name":"CDP-diacylglycerol:myo-inositol 3-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diacylglycerol:myo-inositol-3-phosphatidyltransferase activity","type":"related"},{"name":"CDP-diglyceride-inositol transferase activity","type":"related"},{"name":"CDP-diglyceride:inositol transferase activity","type":"related"},{"name":"CDPdiacylglycerol-inositol 3-phosphatidyltransferase activity","type":"related"},{"name":"cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:myo-inositol 3-phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphodiglyceride-inositol phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphoglyceride-inositol phosphatidyltransferase activity","type":"related"},{"name":"cytidine diphosphoglyceride-inositol transferase activity","type":"related"},{"name":"phosphatidylinositol synthase activity","type":"exact"}],"termid":"GO:0003881","terms_by_termid":{"GO:0003881":null}}


id: PBO:0076135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUCLA2 antisense RNA 1","termid":"PBO:0076135"}


id: FYPO:0002058
data:
  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id: GO:0034709
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large (20 S) protein complex that possesses protein arginine methyltransferase activity and modifies specific arginines to dimethylarginines in the arginine- and glycine-rich domains of several spliceosomal Sm proteins, thereby targeting these proteins to the survival of motor neurons (SMN) complex for assembly into small nuclear ribonucleoprotein (snRNP) core particles. Proteins found in the methylosome include the methyltransferase JBP1 (PRMT5), pICln (CLNS1A), MEP50 (WDR77), and unmethylated forms of SM proteins that have RG domains.","definition_xrefs":["PMID:11713266","PMID:11756452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase complex","termid":"GO:0034708"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"methylosome","synonyms":[{"name":"20S methylosome","type":"exact"},{"name":"20S methyltransferase complex","type":"exact"}],"termid":"GO:0034709"}


id: GO:0050657
data:
  {"annotated_genes":["SJAG_01467","SJAG_00641","SJAG_02704","SJAG_01065","SJAG_01374","SJAG_02274","SJAG_03470","SJAG_03156","SJAG_04645","SJAG_04480","SJAG_03693","SJAG_03593","SJAG_04202","SJAG_04622","SJAG_00298","SJAG_04721","SJAG_02661","SJAG_03729","SJAG_02425","SJAG_04148","SJAG_00093","SJAG_00375","SJAG_01013","SJAG_04589","SJAG_04472","SJAG_04347","SJAG_01449","SJAG_01584","SJAG_01529","SJAG_00471","SJAG_03300","SJAG_02757","SJAG_03847","SJAG_02520","SJAG_01715","SJAG_02209","SJAG_00992","SJAG_01652","SJAG_03986","SJAG_04310","SJAG_04379","SJAG_03283","SJAG_04115","SJAG_04017","SJAG_03299","SJAG_04360","SJAG_03002","SJAG_01083","SJAG_04083","SJAG_05328","SJAG_00178","SJAG_01185","SJAG_02534","SJAG_04536","SJAG_03358","SJAG_04656"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74750,63503,79454,103172,91495,74666,76028,78627,119330,61928,82134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[75134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[60367,58930,65796],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051028"},{"annotations":[75133,118114,77630,71846,116518,76088,82357,118372,109668,76413,112477,103883,76659,74980,75704,76319,104666,103417,105959,113804,121009,98957,79270,117862,111905,73343,120090,113176,94203,98545],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[82022,96001,77534,77092,98140,107091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[104572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[80507,74107,107304,107775],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[81092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[81488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of nucleic acids, single or double-stranded polynucleotides involved in the storage, transmission and transfer of genetic information, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nucleic acid transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0050657","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null,"GO:0071528":null}}


id: GO:1905458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of lymphoid progenitor cell differentiation.","definition_xrefs":["GO_REF:0000058","PMID:27010503","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hematopoietic progenitor cell differentiation","termid":"GO:1901534"},{"relation_name":"is_a","term_name":"regulation of lymphoid progenitor cell differentiation","termid":"GO:1905456"},{"relation_name":"positively_regulates","term_name":"lymphoid progenitor cell differentiation","termid":"GO:0002320"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of lymphoid progenitor cell differentiation","synonyms":[{"name":"activation of lymphoid progenitor cell differentiation","type":"narrow"},{"name":"up regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"up-regulation of lymphoid progenitor cell differentiation","type":"exact"},{"name":"upregulation of lymphoid progenitor cell differentiation","type":"exact"}],"termid":"GO:1905458"}


id: PBO:0055142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2561","termid":"PBO:0055142"}


id: GO:0038164
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with the glycoprotein thrombopoietin and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:19630807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"thrombopoietin receptor activity","termid":"GO:0038164"}


id: PBO:0031792
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_duration_of_cell_cycle_phase","termid":"PBO:0031792"}


id: MONDO:0024879
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma which has spread from the original site of growth to another anatomic site.","definition_xrefs":["NCIT:C3482"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary carcinoma","termid":"MONDO:0024878"},{"relation_name":"is_a","term_name":"metastatic malignant neoplasm","termid":"MONDO:0024880"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"metastatic carcinoma","secondary_identifiers":["ICDO:8010/6","MEDGEN:235141","UMLS:C1384494"],"synonyms":[{"name":"metastatic carcinoma","type":"exact"}],"termid":"MONDO:0024879","xrefs":{"Monarch":{"xref_id":"0024879"}}}


id: GO:0008672
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-dehydro-3-deoxy-D-glucarate = pyruvate + tartronate semialdehyde.","definition_xrefs":["EC:4.1.2.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde-lyase activity","termid":"GO:0016832"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"2-dehydro-3-deoxyglucarate aldolase activity","secondary_identifiers":["MetaCyc:4.1.2.20-RXN","RHEA:10268"],"synonyms":[{"name":"2-dehydro-3-deoxy-D-glucarate tartronate-semialdehyde-lyase (pyruvate-forming)","type":"related"},{"name":"2-dehydro-3-deoxy-D-glucarate tartronate-semialdehyde-lyase activity","type":"related"},{"name":"2-keto-3-deoxyglucarate aldolase activity","type":"related"},{"name":"alpha-keto-beta-deoxy-D-glucarate aldolase activity","type":"related"}],"termid":"GO:0008672"}


id: GO:0018138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of a peptidyl cysteine-peptidyl serine cross-link by the condensation of a cysteine thiol with the carbonyl of the preceding residue and alpha-beta dehydrogenation.","definition_xrefs":["RESID:AA0242"],"gene_count":0,"genotype_count":0,"name":"obsolete peptide cross-linking via L-serine thiazolecarboxylic acid (obsolete GO:0018138)","termid":"GO:0018138"}


id: MONDO:0008598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichodysplasia-xeroderma syndrome is an extremely rare, syndromic hair shaft anomaly characterized by sparse, coarse, brittle, excessively dry and slow-growing scalp hair, sparse axillary and pubic hair, sparse or absent eyelashes and eyebrows and dry skin. Hair shaft analysis shows pili torti, longitudinal splitting, grooves, peeling and scaling. There have been no further descriptions in the literature since 1987.","definition_xrefs":["Orphanet:3361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hair anomaly","termid":"MONDO:0019278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trichodysplasia-xeroderma syndrome","secondary_identifiers":["MEDGEN:349898","MESH:C566032","OMIM:190360","GARD:5261","UMLS:C1860822"],"synonyms":[{"name":"trichodysplasia xeroderma","type":"related"},{"name":"trichodysplasia-xeroderma","type":"related"}],"termid":"MONDO:0008598","xrefs":{"Monarch":{"xref_id":"0008598"}}}


id: MONDO:0000818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete lethal congenital contracture syndrome 4 (obsolete MONDO:0000818)","termid":"MONDO:0000818","xrefs":{"Monarch":{"xref_id":"0000818"}}}


id: SO:0000068
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing a gene that has a sequence that overlaps the sequence of another gene.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene_to_gene_feature","termid":"SO:0000067"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"overlapping","termid":"SO:0000068"}


id: MONDO:0008721
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Medium chain acyl-CoA dehydrogenase (MCAD) deficiency (MCADD) is an inborn error of mitochondrial fatty acid oxidation characterized by a rapidly progressive metabolic crisis, often presenting as hypoketotic hypoglycemia, lethargy, vomiting, seizures and coma, which can be fatal in the absence of emergency medical intervention.","definition_xrefs":["Orphanet:42"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA dehydrogenase deficiency","termid":"MONDO:0017714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"medium chain acyl-CoA dehydrogenase deficiency","secondary_identifiers":["ICD10CM:E71.311","MESH:C536038","DOID:0080153","GARD:540","NCIT:C84538","OMIM:201450","UMLS:C0220710","NANDO:2200513","MEDGEN:65086","ICD9:277.85","SCTID:128596003","icd11.foundation:627734797"],"synonyms":[{"name":"ACADM deficiency","type":"exact"},{"name":"ACADMD","type":"related"},{"name":"Acyl-CoA dehydrogenase, medium chain, deficiency of","type":"exact"},{"name":"Carnitine deficiency secondary to medium-chain acyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"Carnitine deficiency secondary to medium-chain acyl-Coa dehydrogenase deficiency","type":"related"},{"name":"MCAD","type":"exact"},{"name":"MCAD deficiency","type":"exact"},{"name":"MCADD","type":"exact"},{"name":"Mcadh deficiency","type":"related"},{"name":"acyl-CoA dehydrogenase medium chain deficiency of","type":"related"},{"name":"acyl-CoA dehydrogenase, medium-chain deficiency","type":"exact"},{"name":"acyl-CoA dehydrogenase, medium-chain, deficiency OF","type":"related"},{"name":"medium chain acyl CoA dehydrogenase deficiency","type":"related"},{"name":"medium chain acyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"medium chain acyl-coenzyme A dehydrogenase deficiency","type":"exact"},{"name":"medium-chain acyl-CoA dehydrogenase deficiency","type":"exact"},{"name":"medium-chain acyl-Coenzyme A dehydrogenase deficiency","type":"exact"}],"termid":"MONDO:0008721","xrefs":{"Monarch":{"xref_id":"0008721"}}}


id: GO:0070096
data:
  {"annotated_genes":["SJAG_02361","SJAG_03416"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[59355,71901],"is_not":false,"summary":null,"term":"GO:0070096"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a mitochondrial outer membrane translocase complex.","definition_xrefs":["GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"},{"relation_name":"part_of","term_name":"outer mitochondrial membrane organization","termid":"GO:0007008"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02361":null,"SJAG_03416":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0061024","GO:0044085","GO:0007005"],"is_obsolete":false,"name":"mitochondrial outer membrane translocase complex assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"TOM complex assembly","type":"exact"},{"name":"mitochondrion outer membrane translocase complex assembly","type":"exact"}],"termid":"GO:0070096","terms_by_termid":{"GO:0070096":null}}


id: PBO:0067280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 361, pseudogene","termid":"PBO:0067280"}


id: GO:0103069
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 17alpha-hydroxyprogesterone + O2 + reduced [NADPH--hemoprotein reductase] = 11-deoxycortisol + H+ + H2O + oxidized [NADPH--hemoprotein reductase].","definition_xrefs":["RHEA:50308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid 21-monooxygenase activity","termid":"GO:0004509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"17-hydroxyprogesterone 21-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN66-356"],"termid":"GO:0103069"}


id: MONDO:0001812
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"blepharitis","termid":"MONDO:0004785"},{"relation_name":"is_a","term_name":"parasitic eye infection","termid":"MONDO:0020947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"parasitic eyelid infestation","secondary_identifiers":["MEDGEN:509836","DOID:13823","SCTID:193922006","ICD9:373.6","UMLS:C0155183"],"synonyms":[{"name":"parasitic eyelid infestation","type":"exact"},{"name":"parasitic infestation of eyelid","type":"exact"}],"termid":"MONDO:0001812","xrefs":{"Monarch":{"xref_id":"0001812"}}}


id: PR:Q9UT46
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- moc3 gene.","definition_xrefs":["UniProtKB:Q9UT46","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional regulatory protein moc3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.07c","synonyms":[{"name":"Spom972h-moc3","type":"exact"},{"name":"multicopy suppressor of overexpressed cyr1 protein 3 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UT46"}


id: PBO:0069634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 911, pseudogene","termid":"PBO:0069634"}


id: GO:0110018
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where translation initiation recruits the 40S ribosomal subunits in a cap and 5' end independent fashion before an AUG codon is encountered in an appropriate sequence context to initiate circRNA translation.","definition_xrefs":["PMID:28281539","PMID:28344080","PMID:28344082","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cap-independent translational initiation","termid":"GO:0002190"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0002181"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0002181","GO:0010467"],"is_obsolete":false,"name":"cap-independent translational initiation of circular RNA","synonyms":[{"name":"cap-independent translational initiation of circRNA","type":"exact"}],"termid":"GO:0110018"}


id: PBO:0040957
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2 interacting protein 3 pseudogene 28","termid":"PBO:0040957"}


id: GO:0050914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a salty taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of salty taste","synonyms":[{"name":"salty taste perception","type":"exact"}],"termid":"GO:0050914"}


id: PBO:0083622
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3-binding protein of the mitochondrial pyruvate dehydrogenase complex; plays a structural role in the complex by binding and positioning dihydrolipoamide dehydrogenase (E3) to the dihydrolipoamide acetyltransferase (E2) core","termid":"PBO:0083622"}


id: PBO:0017877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nem1-Spo7 complex regulatory subunit (predicted)","termid":"PBO:0017877"}


id: MONDO:0010763
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"},{"relation_name":"is_a","term_name":"partial chromosome Y deletion","termid":"MONDO:0015607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, Y-linked, 1","secondary_identifiers":["OMIM:400042","UMLS:C4551960","DOID:0070186","GARD:18503","MEDGEN:1634798"],"synonyms":[{"name":"SPGFY1","type":"related"},{"name":"Sertoli cell-only syndrome, Y-linked","type":"related"},{"name":"Sertoli cell-only syndrome, type 1","type":"related"},{"name":"Sertoli cell-only syndrome, type 2","type":"related"},{"name":"hypospermatogenesis","type":"related"},{"name":"incomplete Sertoli cell-only syndrome","type":"related"},{"name":"spermatogenic failure, Y-linked, 1","type":"exact"},{"name":"spermatogenic failure, Y-linked, 1, Y-linked","type":"exact"},{"name":"spermatogenic failure, Y-linked, type 1","type":"exact"}],"termid":"MONDO:0010763","xrefs":{"Monarch":{"xref_id":"0010763"}}}


id: MONDO:0002500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete gliosarcoma (obsolete MONDO:0002500)","termid":"MONDO:0002500","xrefs":{"Monarch":{"xref_id":"0002500"}}}


id: MONDO:0005634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute conjunctivitis that is characterized by bleeding into the conjunctiva.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute conjunctivitis","termid":"MONDO:0001214"},{"relation_name":"is_a","term_name":"viral conjunctivitis","termid":"MONDO:0043541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"acute hemorrhagic conjunctivitis","secondary_identifiers":["DOID:11227","NCIT:C34505","EFO:0007131","UMLS:C0009765","ICD9:077.4","MEDGEN:1094","MESH:D003232","SCTID:398264003"],"synonyms":[{"name":"Apollo disease","type":"exact"},{"name":"epidemic hemorrhagic conjunctivitis","type":"exact"},{"name":"viral conjunctivitis","type":"related"}],"termid":"MONDO:0005634","xrefs":{"Monarch":{"xref_id":"0005634"}}}


id: PBO:0089183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent DNA helicase Chl1","termid":"PBO:0089183"}


id: PBO:0034420
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-regulates_commitment_to","termid":"PBO:0034420"}


id: PBO:0057941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3666","termid":"PBO:0057941"}


id: PR:Q9P4X1
data:
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id: MONDO:0012682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary predisposition to infections in which the cause of the disease is a mutation in the TYK2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunodeficiency disease","termid":"MONDO:0021094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 35","secondary_identifiers":["MESH:C566928","GARD:17514","OMIM:611521","Orphanet:331226","MEDGEN:409751","DOID:0111989","UMLS:C1969086"],"synonyms":[{"name":"HIES with atypical Mycobacteriosis, autosomal recessive","type":"exact"},{"name":"IMD35","type":"exact"},{"name":"TYK2 autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency","type":"exact"},{"name":"TYK2 deficiency","type":"exact"},{"name":"autosomal recessive hyper-IgE syndrome due to TYK2 deficiency","type":"exact"},{"name":"autosomal recessive mendelian susceptibility to mycobacterial diseases due to a partial deficiency caused by mutation in TYK2","type":"exact"},{"name":"hyper-IgE syndrome with atypical Mycobacteriosis, autosomal recessive","type":"exact"},{"name":"immunodeficiency 35","type":"exact"},{"name":"immunodeficiency type 35","type":"exact"},{"name":"susceptibility to infection due to TYK2 deficiency","type":"exact"},{"name":"tyrosine kinase 2 deficiency","type":"exact"}],"termid":"MONDO:0012682","xrefs":{"Monarch":{"xref_id":"0012682"}}}


id: GO:0030290
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any of a group of peptide cofactors of enzymes for the lysosomal degradation of sphingolipids. They stimulate various enzymes, including glucosylceramidase, galactosylceramidase, cerebroside-sulfatase, alpha-galactosidase, beta-galactosidase, and sphingomyelin phosphodiesterase.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0030234"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0140677","GO:0030234"],"is_obsolete":false,"name":"sphingolipid activator protein activity","secondary_identifiers":["Reactome:R-HSA-1605717","Reactome:R-HSA-9840470"],"synonyms":[{"name":"saposin","type":"narrow"}],"termid":"GO:0030290"}


id: MONDO:0007217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"brachydactyly","termid":"MONDO:0021004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly type A3","secondary_identifiers":["OMIM:112700","GARD:963","icd11.foundation:153446585","UMLS:C1862140","DOID:0110966","Orphanet:93393","MEDGEN:354670","MESH:C537090"],"synonyms":[{"name":"BDA3","type":"exact"},{"name":"Brachymesophalangy 5","type":"related"},{"name":"brachydactyly, type A3","type":"related"},{"name":"brachydactyly-clinodactyly","type":"exact"},{"name":"brachymesophalangy V","type":"exact"}],"termid":"MONDO:0007217","xrefs":{"Monarch":{"xref_id":"0007217"}}}


id: PBO:0045119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DMRT like family B with proline rich C-terminal 1","termid":"PBO:0045119"}


id: GO:0006701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of progesterone, a steroid hormone produced in the ovary which prepares and maintains the uterus for pregnancy. Also found in plants.","definition_xrefs":["GOC:jl","PMID:14613534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C21-steroid hormone biosynthetic process","termid":"GO:0006700"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"progesterone metabolic process","termid":"GO:0042448"},{"relation_name":"is_a","term_name":"olefinic compound biosynthetic process","termid":"GO:0120255"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"progesterone biosynthetic process","synonyms":[{"name":"progesterone anabolism","type":"exact"},{"name":"progesterone biosynthesis","type":"exact"},{"name":"progesterone formation","type":"exact"},{"name":"progesterone synthesis","type":"exact"}],"termid":"GO:0006701"}


id: GO:0090583
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the PEP-dependent, phosphoryl transfer-driven transport of substances across a membrane. The transport happens by catalysis of the reaction: protein S-phosphocysteine + D-sorbitol(out) = protein cysteine + D-sorbitol-1-phosphate(in).","definition_xrefs":["PMID:8875915"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-phosphocysteine-sugar phosphotransferase activity","termid":"GO:0090563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0016740","GO:0003674","GO:0003824","GO:0005215"],"is_obsolete":false,"name":"protein-phosphocysteine-D-sorbitol-phosphotransferase system transporter activity","termid":"GO:0090583"}


id: FYPO:0005346
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is abolished, and the protein is instead present in the nucleus, during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","PMID:9635190"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization during vegetative growth","termid":"FYPO:0001179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished protein localization to cytoplasm, with protein mislocalized to nucleus during mitotic interphase","synonyms":[{"name":"abolished protein localisation to cytoplasm, with protein mislocalised to nucleus during mitotic interphase","type":"exact"},{"name":"abolished protein localization to cytoplasm, with protein mislocalized to nucleus during interphase during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to cytoplasm, with protein mislocalized to nucleus during mitotic interphase during vegetative growth","type":"exact"},{"name":"protein localization to cytoplasm abolished, with protein mislocalized to nucleus during mitotic interphase","type":"exact"}],"termid":"FYPO:0005346"}


id: PBO:0003860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"circularly permuted 1,3-beta-glucanase (predicted)","termid":"PBO:0003860"}


id: MONDO:0018061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Trichodermodysplasia-dental alterations syndrome is a rare, genetic ectodermal dysplasia syndrome characterized by sparse, thin, brittle scalp hair, as well as sparse eyebrows, eyelashes, axillary and pubic hair, delayed eruption of deciduous teeth and hypodontia of both dentitions. Mild palmoplantar keratosis, cafC)-au-lait spots on back, mild dystrophy of nails, and tibial deflection of toes are also associated. There have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:3353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichodermodysplasia-dental alterations syndrome","secondary_identifiers":["MESH:C537402","UMLS:C2931485","MEDGEN:419092","GARD:4369"],"synonyms":[{"name":"Pinheiro Freire-Maia Miranda syndrome","type":"related"},{"name":"Pinheiro-Freire Maia-Miranda syndrome","type":"exact"},{"name":"Trichodermodysplasia with dental alterations","type":"related"}],"termid":"MONDO:0018061","xrefs":{"Monarch":{"xref_id":"0018061"}}}


id: GO:1901850
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving 7,8-didemethyl-8-hydroxy-5-deazariboflavin.","definition_xrefs":["GOC:yaf","PMID:14593448","UniPathway:UPA00072","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolic process","synonyms":[{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolism","type":"exact"},{"name":"coenzyme F0 metabolism","type":"exact"}],"termid":"GO:1901850"}


id: GO:0002507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that directly activates any of the steps required for tolerance, a physiologic state in which the immune system does not react destructively against the components of an organism that harbors it or against antigens that are introduced to it.","definition_xrefs":["GOC:jal","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"part_of","term_name":"immune system development","termid":"GO:0002520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tolerance induction","termid":"GO:0002507"}


id: PBO:0075424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm associated antigen 11A","termid":"PBO:0075424"}


id: GO:0043469
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of the chemical reactions and pathways resulting in the breakdown of xylose.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"D-xylose catabolic process","termid":"GO:0042843"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0005975","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of D-xylose catabolic process","termid":"GO:0043469"}


id: MONDO:0014771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the KIAA0556 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 26","secondary_identifiers":["UMLS:C4084843","MEDGEN:900415","DOID:0110995","GARD:16160","OMIM:616784"],"synonyms":[{"name":"JBTS26","type":"exact"},{"name":"Joubert syndrome 26","type":"exact"},{"name":"Joubert syndrome caused by mutation in KIAA0556","type":"exact"},{"name":"Joubert syndrome type 26","type":"exact"},{"name":"KIAA0556 Joubert syndrome","type":"exact"}],"termid":"MONDO:0014771","xrefs":{"Monarch":{"xref_id":"0014771"}}}


id: SO:0001869
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A candidate gene whose function has something in common biologically with the trait under investigation.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"candidate_gene","termid":"SO:0001867"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functional_candidate_gene","synonyms":[{"name":"functional candidate gene","type":"exact"},{"name":"functional target gene","type":"exact"}],"termid":"SO:0001869"}


id: PBO:0046817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid amide hydrolase 2","termid":"PBO:0046817"}


id: MOD:01752
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"cysTMT6plex-130 reporter+balance reagent cysteine disulfide","termid":"MOD:01827"},{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent acylated residue","termid":"MOD:01715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent acylated residue","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01752"}


id: GO:1903228
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of xanthosine.","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","PMID:7007809","PMID:7559336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleoside catabolic process","termid":"GO:0046130"},{"relation_name":"is_a","term_name":"xanthosine metabolic process","termid":"GO:1903227"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"xanthosine catabolic process","synonyms":[{"name":"xanthosine breakdown","type":"exact"},{"name":"xanthosine catabolism","type":"exact"},{"name":"xanthosine degradation","type":"exact"}],"termid":"GO:1903228"}


id: PBO:0030436
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_tRNA-Asp_C38_methylation","termid":"PBO:0030436"}


id: PBO:0084517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Member of conserved ER transmembrane complex; required for efficient folding of proteins in the ER; null mutant displays induction of the unfolded protein response; homologous to worm ZK616.6/EMC-4 and fly CG11137; mutation is functionally complemented by human EMC4","termid":"PBO:0084517"}


id: PBO:0025545
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carbohydrate metabolism disorder","termid":"PBO:0025545"}


id: MONDO:0004833
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the thick tissue on the bottom of the foot (plantar fascia) causing heel pain. The plantar fascia (also called plantar aponeurosis) are bands of fibrous tissue extending from the calcaneal tuberosity to the toes. The etiology of plantar fasciitis remains controversial but is likely to involve a biomechanical imbalance. Though often presenting along with heel spur, they do not appear to be causally related.","definition_xrefs":["MESH:D036981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fasciitis","termid":"MONDO:0004830"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plantar fasciitis","secondary_identifiers":["UMLS:C0149756","icd11.foundation:254630809","MEDGEN:56201","DOID:9600","SCTID:202882003"],"termid":"MONDO:0004833","xrefs":{"Monarch":{"xref_id":"0004833"}}}


id: PBO:0090018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Lea1","termid":"PBO:0090018"}


id: PBO:0090852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxylic acid transmembrane transporter Tna1","termid":"PBO:0090852"}


id: FYPO:0007972
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed during mitotic anaphase B in which interpolar microtubule polymerization, i.e. the addition of tubulin dimers to the plus end of a microtubule occurs at a lower rate, or speed, than normal.","definition_xrefs":["PomBase:mlr","PMID:35293864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased rate of microtubule polymerization during vegetative growth","termid":"FYPO:0005703"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000054"}],"interesting_parent_ids":["FYPO:0000054","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased rate of interpolar microtubule polymerization during mitotic anaphase B","termid":"FYPO:0007972"}


id: GO:0047125
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + L-pipecolate = NADPH + delta1-piperideine-2-carboxylate.","definition_xrefs":["EC:1.5.1.21"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"delta1-piperideine-2-carboxylate reductase activity","secondary_identifiers":["MetaCyc:RXN-8166","RHEA:12524"],"synonyms":[{"name":"1,2-didehydropipecolate reductase activity","type":"related"},{"name":"1,2-didehydropipecolic reductase activity","type":"related"},{"name":"D1-piperideine-2-carboxylate reductase activity","type":"exact"},{"name":"L-pipecolate:NADP+ 2-oxidoreductase activity","type":"related"},{"name":"P2C reductase activity","type":"related"},{"name":"delta 1-piperideine-2-carboxylate reductase activity","type":"exact"}],"termid":"GO:0047125"}


id: SO:0001830
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A PCR product obtained by applying the AFLP technique, based on a restriction enzyme digestion of genomic DNA and an amplification of the resulting fragments.","definition_xrefs":["GMOD:ea"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PCR_product","termid":"SO:0000006"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AFLP_fragment","secondary_identifiers":["http://en.wikipedia.org/wiki/Amplified_fragment_length_polymorphism"],"synonyms":[{"name":"AFLP","type":"exact"},{"name":"AFLP fragment","type":"exact"},{"name":"AFLP-PCR","type":"exact"},{"name":"amplified fragment length polymorphism","type":"exact"},{"name":"amplified fragment length polymorphism PCR","type":"exact"}],"termid":"SO:0001830"}


id: PBO:0071013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 15","termid":"PBO:0071013"}


id: GO:0010893
data:
  {"annotated_genes":["SJAG_04018"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070452"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of steroids, compounds with a 1,2,cyclopentanoperhydrophenanthrene nucleus.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of steroid metabolic process","termid":"GO:0045940"},{"relation_name":"is_a","term_name":"positive regulation of lipid biosynthetic process","termid":"GO:0046889"},{"relation_name":"is_a","term_name":"regulation of steroid biosynthetic process","termid":"GO:0050810"},{"relation_name":"positively_regulates","term_name":"steroid biosynthetic process","termid":"GO:0006694"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04018":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006629"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"positive regulation of steroid biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010893","terms_by_termid":{"GO:0070452":null}}


id: GO:0032619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of interleukin-16 due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"interleukin-16 production","secondary_identifiers":["GO:0042234","GO:0072614"],"synonyms":[{"name":"IL-16 production","type":"exact"},{"name":"LCF production","type":"narrow"},{"name":"interleukin-16 biosynthetic process","type":"narrow"},{"name":"interleukin-16 secretion","type":"narrow"},{"name":"pro-interleukin-16 production","type":"exact"}],"termid":"GO:0032619"}


id: PBO:0090370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SBF complex transcription corepressor, Whi5","termid":"PBO:0090370"}


id: GO:1901574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of chemical substance.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete chemical substance biosynthetic process (obsolete GO:1901574)","synonyms":[{"name":"chemical substance anabolism","type":"exact"},{"name":"chemical substance biosynthesis","type":"exact"},{"name":"chemical substance biosynthetic process","type":"exact"},{"name":"chemical substance formation","type":"exact"},{"name":"chemical substance synthesis","type":"exact"}],"termid":"GO:1901574"}


id: PBO:0111315
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial PRR repeat protein, implicated in mitochondrial gene expression","termid":"PBO:0111315"}


id: _global:causal_relation_between_entities
data:
  {"annotation_feature_type":"gene","cv_name":"external","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"_global:causally_related_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_entities","secondary_identifiers":["RO:0002506"],"termid":"_global:causal_relation_between_entities"}


id: GO:0052559
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates the immune response of the host organism; the immune response is any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host immune response (obsolete GO:0052559)","synonyms":[{"name":"activation by symbiont of host immune response","type":"exact"},{"name":"induction by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of immune response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of host immune response","type":"related"},{"name":"stimulation by symbiont of host immune response","type":"related"},{"name":"up regulation by symbiont of host immune response","type":"related"},{"name":"up-regulation by symbiont of host immune response","type":"related"},{"name":"upregulation by symbiont of host immune response","type":"exact"}],"termid":"GO:0052559"}


id: GO:0072040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces the occurrence or rate of mesenchymal stem cell death by apoptotic process that contributes to the shaping of the nephron.","definition_xrefs":["GOC:mtg_apoptosis","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:0072039"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in morphogenesis","termid":"GO:1902338"},{"relation_name":"is_a","term_name":"negative regulation of somatic stem cell population maintenance","termid":"GO:1904673"},{"relation_name":"is_a","term_name":"negative regulation of mesenchymal cell apoptotic process","termid":"GO:2001054"},{"relation_name":"negatively_regulates","term_name":"mesenchymal stem cell maintenance involved in nephron morphogenesis","termid":"GO:0072038"},{"relation_name":"negatively_regulates","term_name":"mesenchymal cell apoptotic process involved in nephron morphogenesis","termid":"GO:1901145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of mesenchymal cell apoptotic process involved in nephron morphogenesis","synonyms":[{"name":"negative regulation of mesenchymal stem cell apoptosis involved in nephron morphogenesis","type":"narrow"},{"name":"negative regulation of mesenchymal stem cell apoptotic process involved in nephron morphogenesis","type":"exact"}],"termid":"GO:0072040"}


id: GO:0071824
data:
  {"annotated_genes":["SJAG_03095","SJAG_00303","SJAG_02198","SJAG_02267","SJAG_02074","SJAG_02458","SJAG_00757","SJAG_02691","SJAG_02174","SJAG_00942","SJAG_04995","SJAG_03956","SJAG_03542","SJAG_04272","SJAG_00327","SJAG_01653","SJAG_01207","SJAG_02908","SJAG_02813","SJAG_00336","SJAG_03120","SJAG_02667","SJAG_04038","SJAG_04670","SJAG_00170","SJAG_01823","SJAG_02416","SJAG_01378","SJAG_00247","SJAG_04879","SJAG_02607","SJAG_02079","SJAG_03982","SJAG_03128","SJAG_02314","SJAG_02906","SJAG_04530","SJAG_01771","SJAG_00692","SJAG_00741","SJAG_04654","SJAG_03900","SJAG_03285","SJAG_01475","SJAG_03685","SJAG_01808","SJAG_03007","SJAG_00939","SJAG_01410","SJAG_01523","SJAG_04274","SJAG_02708","SJAG_01708","SJAG_03221","SJAG_04257","SJAG_00766"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[111987,117464,115624,109381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140529"},{"annotations":[67196,77731,77060,74262,66364],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000730"},{"annotations":[105337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140530"},{"annotations":[80490],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000707"},{"annotations":[109697,112352],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010772"},{"annotations":[57685,73940,80211],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902977"},{"annotations":[117083,105340,112613],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902985"},{"annotations":[116600,109765,80808,93123,93122,63239,74967,75220,71826,98463],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006334"},{"annotations":[92072,99094,118965],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006337"},{"annotations":[115349,113325,59481,76758],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034728"},{"annotations":[111021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006294"},{"annotations":[81510,91720],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0045899"},{"annotations":[65281,79441,70098],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001188"},{"annotations":[96154,73324,72446,72595,78790,75603,68963,77525,79222,74000,76395,76913],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051123"},{"annotations":[73758,105087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070898"},{"annotations":[101740,118008,110157],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905324"}]},"cv_name":"biological_process","definition":"Any process in which macromolecules aggregate, disaggregate, or are modified, resulting in the formation, disassembly, or alteration of a protein-DNA complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex organization","termid":"GO:0043933"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00170":null,"SJAG_00247":null,"SJAG_00303":null,"SJAG_00327":null,"SJAG_00336":null,"SJAG_00692":null,"SJAG_00741":null,"SJAG_00757":null,"SJAG_00766":null,"SJAG_00939":null,"SJAG_00942":null,"SJAG_01207":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01475":null,"SJAG_01523":null,"SJAG_01653":null,"SJAG_01708":null,"SJAG_01771":null,"SJAG_01808":null,"SJAG_01823":null,"SJAG_02074":null,"SJAG_02079":null,"SJAG_02174":null,"SJAG_02198":null,"SJAG_02267":null,"SJAG_02314":null,"SJAG_02416":null,"SJAG_02458":null,"SJAG_02607":null,"SJAG_02667":null,"SJAG_02691":null,"SJAG_02708":null,"SJAG_02813":null,"SJAG_02906":null,"SJAG_02908":null,"SJAG_03007":null,"SJAG_03095":null,"SJAG_03120":null,"SJAG_03128":null,"SJAG_03221":null,"SJAG_03285":null,"SJAG_03542":null,"SJAG_03685":null,"SJAG_03900":null,"SJAG_03956":null,"SJAG_03982":null,"SJAG_04038":null,"SJAG_04257":null,"SJAG_04272":null,"SJAG_04274":null,"SJAG_04530":null,"SJAG_04654":null,"SJAG_04670":null,"SJAG_04879":null,"SJAG_04995":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein-DNA complex organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"DNA-protein complex subunit organization","type":"exact"},{"name":"protein-DNA complex subunit organisation","type":"exact"},{"name":"protein-DNA complex subunit organization","type":"exact"}],"termid":"GO:0071824","terms_by_termid":{"GO:0000707":null,"GO:0000730":null,"GO:0001188":null,"GO:0006294":null,"GO:0006334":null,"GO:0006337":null,"GO:0010772":null,"GO:0034728":null,"GO:0045899":null,"GO:0051123":null,"GO:0070898":null,"GO:0140529":null,"GO:0140530":null,"GO:1902977":null,"GO:1902985":null,"GO:1905324":null}}


id: MONDO:0005586
data:
  {"annotated_genes":["SJAG_03453","SJAG_03429","SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"},{"annotations":[88717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[87859],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008097"}]},"cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the anatomic structures of the head and neck region. Representative examples of benign neoplasms include salivary gland pleomorphic adenoma and nasal cavity papilloma. Representative examples of malignant neoplasms include oral cavity squamous cell carcinoma, laryngeal squamous cell carcinoma, and salivary gland carcinoma.","definition_xrefs":["NCIT:C3077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm","termid":"MONDO:0005070"}],"gene_count":3,"genes_by_uniquename":{"SJAG_03429":null,"SJAG_03453":null,"SJAG_03677":null},"genotype_count":0,"is_obsolete":false,"name":"head and neck neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:255055008","UMLS:C0018671","EFO:0005950","MEDGEN:6728","ONCOTREE:HEADNECK","ICD9:239.89"],"synonyms":[{"name":"craniocervical region neoplasm","type":"exact"},{"name":"craniocervical region neoplasm (disease)","type":"exact"},{"name":"craniocervical region tumor","type":"exact"},{"name":"craniocervical region tumour","type":"exact"},{"name":"head and neck neoplasm","type":"exact"},{"name":"head and neck neoplasm (excluding central nervous system)","type":"exact"},{"name":"head and neck tumor","type":"exact"},{"name":"head and neck tumour","type":"exact"},{"name":"neoplasm of craniocervical region","type":"exact"},{"name":"neoplasm of head and neck","type":"exact"},{"name":"neoplasm of the head and neck","type":"exact"},{"name":"tumor of craniocervical region","type":"exact"},{"name":"tumor of head and neck","type":"exact"},{"name":"tumor of the head and neck","type":"exact"},{"name":"tumour of craniocervical region","type":"exact"},{"name":"tumour of head and neck","type":"exact"},{"name":"tumour of the head and neck","type":"exact"}],"termid":"MONDO:0005586","terms_by_termid":{"MONDO:0008097":null,"MONDO:0009050":null,"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0005586"}}}


id: GO:1905948
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + 3',5'-cyclic GMP(in) = ADP + phosphate + 3',5'-cyclic GMP(out).","definition_xrefs":["GOC:TermGenie","PMID:18310115","GO_REF:0000070"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanine nucleotide transmembrane transporter activity","termid":"GO:0001409"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"},{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"ABC-type 3',5'-cyclic GMP transmembrane transporter activity","secondary_identifiers":["RHEA:66188"],"synonyms":[{"name":"3',5'-cyclic GMP transmembrane-transporting ATPase activity","type":"exact"},{"name":"ATP-dependent 3',5'-cyclic GMP transmembrane transporter activity","type":"exact"},{"name":"ATPase-coupled 3',5'-cyclic GMP transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled cGMP transmembrane transporter activity","type":"exact"}],"termid":"GO:1905948"}


id: SO:0001392
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified threonine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_threonine","secondary_identifiers":["MOD:00917"],"synonyms":[{"name":"ModThr","type":"exact"},{"name":"modified L threonine","type":"exact"},{"name":"modified L-threonine","type":"exact"}],"termid":"SO:0001392"}


id: MONDO:0957284
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nemaline myopathy","termid":"MONDO:0018958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"nemaline myopathy 5C, autosomal dominant","secondary_identifiers":["MEDGEN:1841185","OMIM:620389","UMLS:C5830549","DOID:0081375"],"termid":"MONDO:0957284","xrefs":{"Monarch":{"xref_id":"0957284"}}}


id: PBO:0026676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_aluminium","termid":"PBO:0026676"}


id: PBO:0067964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 266","termid":"PBO:0067964"}


id: PBO:0028340
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cyclin-dependent_protein_kinase_activity","termid":"PBO:0028340"}


id: PBO:0045110
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dimethylglycine dehydrogenase","termid":"PBO:0045110"}


id: PBO:0028297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_localization_to_old_growing_cell_tip","termid":"PBO:0028297"}


id: PBO:0081237
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 3","termid":"PBO:0081237"}


id: PBO:0057113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 200b","termid":"PBO:0057113"}


id: PBO:0081404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 252, pseudogene","termid":"PBO:0081404"}


id: PR:Q9P3V7
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1348.03 gene.","definition_xrefs":["UniProtKB:Q9P3V7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0742 protein C1348.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1348.03","synonyms":[{"name":"Spom972h-SPBC1348.03","type":"exact"}],"termid":"PR:Q9P3V7"}


id: PBO:0051810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif and ubiquitin domain containing","termid":"PBO:0051810"}


id: PBO:0090216
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COPII-coated vesicle component Sec31","termid":"PBO:0090216"}


id: GO:0001873
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a polysaccharide and transmitting the signal to initiate an innate immune response. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pattern recognition receptor activity","termid":"GO:0038187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"polysaccharide immune receptor activity","synonyms":[{"name":"polysaccharide receptor activity","type":"broad"}],"termid":"GO:0001873"}


id: MONDO:0002122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuropathy arising from inflammation of one or more nerves.","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral neuropathy","termid":"MONDO:0005244"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"neuritis","secondary_identifiers":["MESH:D009443","DOID:1803","SCTID:84299009","UMLS:C0027813","ICD9:729.2","MEDGEN:14344","NCIT:C116381","SCTID:128192007"],"synonyms":[{"name":"nerve inflammation","type":"exact"},{"name":"peripheral neuritis","type":"exact"}],"termid":"MONDO:0002122","xrefs":{"Monarch":{"xref_id":"0002122"}}}


id: PBO:0042459
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 123","termid":"PBO:0042459"}


id: MONDO:0012741
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial prostate cancer in which the cause of the disease is a mutation in the EHBP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostate cancer, hereditary","termid":"MONDO:0700275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"prostate cancer, hereditary, 12","secondary_identifiers":["GARD:15529","OMIM:611868","MEDGEN:437216","UMLS:C2678479","MESH:C567510"],"synonyms":[{"name":"EHBP1 familial prostate cancer","type":"exact"},{"name":"HPC12","type":"related"},{"name":"familial prostate cancer caused by mutation in EHBP1","type":"exact"},{"name":"prostate cancer, hereditary, 12","type":"exact"},{"name":"prostate cancer, hereditary, type 12","type":"exact"}],"termid":"MONDO:0012741","xrefs":{"Monarch":{"xref_id":"0012741"}}}


id: MONDO:0016524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An alteration in limb growth caused by congenital vascular malformations in childhood.","definition_xrefs":["PMID:8305978"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital vascular bone syndrome (obsolete MONDO:0016524)","secondary_identifiers":["icd11.foundation:825559961","Orphanet:235832"],"termid":"MONDO:0016524","xrefs":{"Monarch":{"xref_id":"0016524"}}}


id: PBO:0085028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-myristoylated calcium-binding protein; may have a role in intracellular signaling through its regulation of the phosphatidylinositol 4-kinase Pik1p; member of the recoverin/frequenin branch of the EF-hand superfamily; human NCS1 functionally complements the heat sensitivity of a frq1 ts mutant","termid":"PBO:0085028"}


id: PR:O94661
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A TBC1 domain family member 20 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR20913:SF7","OMA:SCHPO02782"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase-activating protein gyp10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC651.03c","secondary_identifiers":["UniProtKB:O94661"],"synonyms":[{"name":"Spom972h-TBC1D20","type":"exact"}],"termid":"PR:O94661"}


id: PR:O94322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC725.03 gene.","definition_xrefs":["UniProtKB:O94322","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C725.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.03","synonyms":[{"name":"Spom972h-SPBC725.03","type":"exact"}],"termid":"PR:O94322"}


id: GO:0019674
data:
  {"annotated_genes":["SJAG_01753","SJAG_00522","SJAG_00714","SJAG_04693","SJAG_02191","SJAG_02889","SJAG_01500","SJAG_03298","SJAG_03091","SJAG_03306","SJAG_02154","SJAG_02618"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113866,118618,89852,98573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043490"},{"annotations":[115144,76708,79599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[82014,72763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[74345],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019677"},{"annotations":[97121,97122],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006735"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving nicotinamide adenine dinucleotide (NAD+), a coenzyme that interconverts with its reduced form, NADH, in many redox and catabolic reactions.","definition_xrefs":["PMID:28648096"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleotide metabolic process","termid":"GO:0006163"},{"relation_name":"is_a","term_name":"nicotinamide nucleotide metabolic process","termid":"GO:0046496"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00522":null,"SJAG_00714":null,"SJAG_01500":null,"SJAG_01753":null,"SJAG_02154":null,"SJAG_02191":null,"SJAG_02618":null,"SJAG_02889":null,"SJAG_03091":null,"SJAG_03298":null,"SJAG_03306":null,"SJAG_04693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"NAD+ metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-196807"],"synonyms":[{"name":"NAD (oxidized) metabolic process","type":"exact"},{"name":"NAD (oxidized) metabolism","type":"exact"},{"name":"NAD metabolic process","type":"exact"},{"name":"NAD metabolism","type":"exact"},{"name":"NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"oxidized NAD metabolic process","type":"exact"},{"name":"oxidized NAD metabolism","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:0019674","terms_by_termid":{"GO:0006735":null,"GO:0009435":null,"GO:0019677":null,"GO:0034355":null,"GO:0043490":null}}


id: MOD:02015
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom with a linoloyl group.","direct_ancestors":[{"relation_name":"is_a","term_name":"acylated residue","termid":"MOD:00649"},{"relation_name":"is_a","term_name":"lipoconjugated residue","termid":"MOD:01155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01155"],"is_obsolete":false,"name":"linoloylated residue","termid":"MOD:02015"}


id: GO:0019332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The oxidation of nitrite (NO2) to nitrate (NO3), using oxygen (O2) as the electron acceptor. Nitrite oxidation is the final step in nitrification, the oxidation of ammonia to nitrate, and nitrite oxidoreductase (NOR) is the key enzyme complex that catalyzes the conversion of nitrite to nitrate in nitrite oxidizing species.","definition_xrefs":["MetaCyc:P282-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aerobic respiration","termid":"GO:0009060"},{"relation_name":"is_a","term_name":"energy derivation by oxidation of reduced inorganic compounds","termid":"GO:0015975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"aerobic respiration, using nitrite as electron donor","synonyms":[{"name":"nitrite oxidation","type":"broad"}],"termid":"GO:0019332"}


id: PBO:0052734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 26","termid":"PBO:0052734"}


id: MONDO:0016776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Frontal fibrosing alopecia (FFA) is a rare variant of lichen planopilaris characterized by symmetrical, progressive, band-like anterior hair loss of the scalp.","definition_xrefs":["Orphanet:254492"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alopecia","termid":"MONDO:0004907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontal fibrosing alopecia","secondary_identifiers":["SCTID:717055000","GARD:10886","MEDGEN:899012","UMLS:C4255374","ICD10CM:L66.1","icd11.foundation:1257078333"],"synonyms":[{"name":"FFA","type":"exact"}],"termid":"MONDO:0016776","xrefs":{"Monarch":{"xref_id":"0016776"}}}


id: MONDO:0010844
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any multiple epiphyseal dysplasia in which the cause of the disease is a mutation in the COL9A2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple epiphyseal dysplasia due to collagen 9 anomaly","termid":"MONDO:0015627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"epiphyseal dysplasia, multiple, 2","secondary_identifiers":["MEDGEN:333092","UMLS:C1838429","MESH:C535502","OMIM:600204","GARD:9791","DOID:0070298"],"synonyms":[{"name":"COL9A2 multiple epiphyseal dysplasia (disease)","type":"exact"},{"name":"EDM2","type":"related"},{"name":"epiphyseal dysplasia multiple 2","type":"related"},{"name":"epiphyseal dysplasia, multiple, 2","type":"exact"},{"name":"epiphyseal dysplasia, multiple, type 2","type":"exact"},{"name":"multiple epiphyseal dysplasia (disease) caused by mutation in COL9A2","type":"exact"},{"name":"multiple epiphyseal dysplasia 2","type":"related"}],"termid":"MONDO:0010844","xrefs":{"Monarch":{"xref_id":"0010844"}}}


id: GO:0008161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete carbamate resistance (obsolete GO:0008161)","synonyms":[{"name":"carbamate resistance","type":"exact"}],"termid":"GO:0008161"}


id: PBO:0079762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-fold modifier conjugating enzyme 1","termid":"PBO:0079762"}


id: FYPO:0000693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of DNA-1,N6-ethenoadenine N-glycosylase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal DNA-1,N6-ethenoadenine N-glycosylase activity","termid":"FYPO:0000692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000652","FYPO:0001985","FYPO:0000707"],"is_obsolete":false,"name":"decreased DNA-1,N6-ethenoadenine N-glycosylase activity","synonyms":[{"name":"reduced DNA-1,N6-ethenoadenine N-glycosylase activity","type":"exact"}],"termid":"FYPO:0000693"}


id: GO:0043552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of phosphatidylinositol 3-kinase activity.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of phosphatidylinositol 3-kinase activity (obsolete GO:0043552)","synonyms":[{"name":"activation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"positive regulation of phosphoinositide 3-kinase activity","type":"exact"},{"name":"stimulation of phosphatidylinositol 3-kinase activity","type":"narrow"},{"name":"up regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"up-regulation of phosphatidylinositol 3-kinase activity","type":"exact"},{"name":"upregulation of phosphatidylinositol 3-kinase activity","type":"exact"}],"termid":"GO:0043552"}


id: GO:0036241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of glutamate into 4-hydroxybutyrate.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"short-chain fatty acid metabolic process","termid":"GO:0046459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"glutamate catabolic process to 4-hydroxybutyrate","termid":"GO:0036241"}


id: MONDO:0019859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital thyroid malformation without hypothyroidism (obsolete MONDO:0019859)","secondary_identifiers":["Orphanet:95718"],"termid":"MONDO:0019859","xrefs":{"Monarch":{"xref_id":"0019859"}}}


id: GO:0019347
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of GDP-alpha-D-mannosylchitobiosyldiphosphodolichol, a substance composed of mannosylchitobiosyldiphosphodolichol in glycosidic linkage with guanosine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid biosynthetic process","termid":"GO:0008654"},{"relation_name":"is_a","term_name":"glycolipid biosynthetic process","termid":"GO:0009247"},{"relation_name":"is_a","term_name":"terpenoid biosynthetic process","termid":"GO:0016114"},{"relation_name":"is_a","term_name":"nucleoside phosphate biosynthetic process","termid":"GO:1901293"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol biosynthetic process","secondary_identifiers":["MetaCyc:MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS"],"synonyms":[{"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol anabolism","type":"exact"},{"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol biosynthesis","type":"exact"},{"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol formation","type":"exact"},{"name":"GDP-alpha-D-mannosylchitobiosyldiphosphodolichol synthesis","type":"exact"}],"termid":"GO:0019347"}


id: PBO:0090959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Loc1","termid":"PBO:0090959"}


id: GO:1904160
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a chloroplast starch grain.","definition_xrefs":["PMID:25710501","GO_REF:0000087","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to chloroplast","termid":"GO:0072598"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein localization to chloroplast starch grain","synonyms":[{"name":"protein localisation in chloroplast starch grain","type":"exact"},{"name":"protein localisation to chloroplast starch grain","type":"exact"},{"name":"protein localization in chloroplast starch grain","type":"exact"}],"termid":"GO:1904160"}


id: GO:1900813
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving monodictyphenone.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound metabolic process","termid":"GO:0018958"},{"relation_name":"is_a","term_name":"secondary metabolic process","termid":"GO:0019748"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"},{"relation_name":"is_a","term_name":"ketone metabolic process","termid":"GO:0042180"},{"relation_name":"is_a","term_name":"benzene-containing compound metabolic process","termid":"GO:0042537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monodictyphenone metabolic process","synonyms":[{"name":"monodictyphenone metabolism","type":"exact"}],"termid":"GO:1900813"}


id: GO:0070493
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway initiated by thrombin binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process.","definition_xrefs":["PMID:1672265","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled receptor signaling pathway","termid":"GO:0007186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"thrombin-activated receptor signaling pathway","synonyms":[{"name":"thrombin receptor signaling pathway","type":"exact"},{"name":"thrombin receptor signalling pathway","type":"exact"}],"termid":"GO:0070493"}


id: FYPO:0007408
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin is abnormal at sites encoding polyadenylation signals.","definition_xrefs":["PMID:32499400","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to chromatin at polyadenylation site","synonyms":[{"name":"abnormal protein localisation to chromatin at polyadenylation site","type":"exact"},{"name":"abnormal protein localization to chromatin at poly(A) site","type":"exact"},{"name":"abnormal protein localization to chromatin at polyadenylation site during mitotic cell cycle","type":"related"},{"name":"abnormal protein localization to chromatin at polyadenylation site during vegetative growth","type":"exact"}],"termid":"FYPO:0007408"}


id: GO:0030381
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the structural pattern of a chorion-containing eggshell such as those found in insects.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"chorion-containing eggshell formation","termid":"GO:0007304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chorion-containing eggshell pattern formation","termid":"GO:0030381"}


id: MONDO:0015208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A esophageal malformation that is part of a larger syndrome.","definition_xrefs":["MONDO:patterns/syndromic"],"gene_count":0,"genotype_count":0,"name":"obsolete syndromic esophageal malformation (obsolete MONDO:0015208)","secondary_identifiers":["Orphanet:108961"],"synonyms":[{"name":"syndrome associated with esophageal malformation","type":"exact"},{"name":"syndromic esophageal malformation","type":"exact"}],"termid":"MONDO:0015208","xrefs":{"Monarch":{"xref_id":"0015208"}}}


id: MONDO:0016625
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of deficiency anemia that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deficiency anemia","termid":"MONDO:0001639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"acquired deficiency anemia","secondary_identifiers":["Orphanet:248302","UMLS:C5680693","MEDGEN:1842907"],"synonyms":[{"name":"rare acquired deficiency anaemia","type":"exact"},{"name":"rare acquired deficiency anemia","type":"exact"}],"termid":"MONDO:0016625","xrefs":{"Monarch":{"xref_id":"0016625"}}}


id: PBO:0084209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Homeodomain-containing transcriptional repressor; regulates expression of PTR2, which encodes a major peptide transporter; imported peptides activate ubiquitin-dependent proteolysis, resulting in degradation of Cup9p and de-repression of PTR2 transcription; CUP9 has a paralog, TOS8, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress","termid":"PBO:0084209"}


id: PBO:0051556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interleukin 10 receptor subunit alpha","termid":"PBO:0051556"}


id: GO:0097230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the controlled self-propelled movement of a cell that results in translocation of the cell from one place to another as a result of a potassium ion stimulus.","definition_xrefs":["GOC:pf","PMID:19363786","PMID:21239624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"},{"relation_name":"part_of","term_name":"cellular response to potassium ion","termid":"GO:0035865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell motility in response to potassium ion","synonyms":[{"name":"K+ facilitation of cell motility","type":"exact"},{"name":"potassium ion facilitation of cell motility","type":"exact"}],"termid":"GO:0097230"}


id: PBO:0065798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"R3H domain containing like","termid":"PBO:0065798"}


id: GO:0080128
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the anther septum over time, from its formation to the mature structure. The anther septum is a thin partition or stretch of cells that are present in the anther dehiscence zone.","definition_xrefs":["PO:0005010","GOC:dhl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"plant septum development","termid":"GO:1905328"},{"relation_name":"part_of","term_name":"anther development","termid":"GO:0048653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther septum development","termid":"GO:0080128"}


id: PBO:0064503
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POLR2D pseudogene 2","termid":"PBO:0064503"}


id: PBO:0047809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forkhead box L3","termid":"PBO:0047809"}


id: SO:0001653
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcription factor binding site of variable direct repeats of the sequence PuGGTCA spaced by five nucleotides (DR5) found in the promoters of retinoic acid-responsive genes, to which retinoic acid receptors bind.","definition_xrefs":["PMID:11327309","PMID:19917671"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TF_binding_site","termid":"SO:0000235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic_acid_responsive_element","synonyms":[{"name":"RARE","type":"exact"},{"name":"retinoic acid responsive element","type":"exact"}],"termid":"SO:0001653"}


id: MONDO:0020116
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of blood coagulation disease that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare blood coagulation disease (obsolete MONDO:0020116)","secondary_identifiers":["Orphanet:98429"],"synonyms":[{"name":"rare blood coagulation disease","type":"exact"},{"name":"rare coagulation disorder","type":"related"}],"termid":"MONDO:0020116","xrefs":{"Monarch":{"xref_id":"0020116"}}}


id: PBO:0075591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor, Kunitz type 3","termid":"PBO:0075591"}


id: GO:0102964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-corytuberine + S-adenosyl-L-methionine = magnoflorine + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:51524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"S-adenosyl-L-methionine:(S)-corytuberine-N-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9315"],"termid":"GO:0102964"}


id: GO:1905844
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to gamma radiation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23505386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"regulation of cellular response to gamma radiation","termid":"GO:1905843"},{"relation_name":"is_a","term_name":"negative regulation of response to gamma radiation","termid":"GO:2001229"},{"relation_name":"negatively_regulates","term_name":"cellular response to gamma radiation","termid":"GO:0071480"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to gamma radiation","synonyms":[{"name":"down regulation of cellular response to gamma radiation","type":"exact"},{"name":"down regulation of cellular response to gamma ray","type":"related"},{"name":"down regulation of cellular response to gamma-ray photon","type":"related"},{"name":"down-regulation of cellular response to gamma radiation","type":"exact"},{"name":"down-regulation of cellular response to gamma ray","type":"related"},{"name":"down-regulation of cellular response to gamma-ray photon","type":"related"},{"name":"downregulation of cellular response to gamma radiation","type":"exact"},{"name":"downregulation of cellular response to gamma ray","type":"related"},{"name":"downregulation of cellular response to gamma-ray photon","type":"related"},{"name":"inhibition of cellular response to gamma radiation","type":"narrow"},{"name":"inhibition of cellular response to gamma ray","type":"related"},{"name":"inhibition of cellular response to gamma-ray photon","type":"related"},{"name":"negative regulation of cellular response to gamma ray","type":"related"},{"name":"negative regulation of cellular response to gamma-ray photon","type":"related"}],"termid":"GO:1905844"}


id: PBO:0058004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3927","termid":"PBO:0058004"}


id: PBO:0079454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tumor suppressor candidate 7","termid":"PBO:0079454"}


id: MONDO:0018467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nephropathic infantile cystinosis is the most common and severe form of cystinosis, a metabolic disease characterized by an accumulation of cystine inside the lysosomes that causes damage in different organs and tissues, particularly in the kidneys and eyes.","definition_xrefs":["Orphanet:411629"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"inborn disorder of amino acid transport","termid":"MONDO:0019216"},{"relation_name":"is_a","term_name":"nephropathic cystinosis","termid":"MONDO:0100151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0004736","MONDO:0002561","MONDO:0005066"],"is_obsolete":false,"name":"nephropathic infantile cystinosis","secondary_identifiers":["ICD10EXP:E72.0+","SCTID:62332007","UMLS:C3537440","NANDO:1200162","ICD10EXP:N16.3*","MEDGEN:760976","GARD:9755","NANDO:2201234"],"synonyms":[{"name":"CTNS","type":"related"},{"name":"cystinosin, defect of","type":"related"},{"name":"cystinosis, atypical nephropathic","type":"related"},{"name":"cystinosis, infantile nephropathic","type":"exact"},{"name":"lysosomal cystine transport protein, defect of","type":"related"},{"name":"nephropathic infantile cystinosis","type":"exact"}],"termid":"MONDO:0018467","xrefs":{"Monarch":{"xref_id":"0018467"}}}


id: PBO:0058474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5582","termid":"PBO:0058474"}


id: PBO:0055965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 78, pseudogene","termid":"PBO:0055965"}


id: PBO:0078825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon AGG) 2-8","termid":"PBO:0078825"}


id: PATO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphologic quality inhering in a bearer by virtue of the bearer's relative size, organization and distribution of its surface elements or the representation or invention of the appearance of its surface; visual and tactile surface characteristics.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphology","termid":"PATO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"texture","termid":"PATO:0000150"}


id: MONDO:0013384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing Hirschsprung disease in which the cause of the disease is a mutation in the EDN3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hirschsprung disease, susceptibility to","termid":"MONDO:0100179"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Hirschsprung disease, susceptibility to, 4","secondary_identifiers":["UMLS:C3150975","MEDGEN:462325","OMIM:613712"],"synonyms":[{"name":"EDN3 Hirschsprung disease","type":"exact"},{"name":"HSCR4","type":"related"},{"name":"Hirschsprung disease caused by mutation in EDN3","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, 4","type":"exact"},{"name":"Hirschsprung disease, susceptibility to, type 4","type":"exact"},{"name":"susceptibility to Hirschsprung disease 4","type":"related"}],"termid":"MONDO:0013384","xrefs":{"Monarch":{"xref_id":"0013384"}}}


id: PBO:0049380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTF3C2 antisense RNA 2","termid":"PBO:0049380"}


id: PBO:0029994
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_actomyosin_contractile_ring_disassembly","termid":"PBO:0029994"}


id: PBO:0068482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 63, pseudogene","termid":"PBO:0068482"}


id: MONDO:1012043
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar abiotrophy, non-human animal","termid":"MONDO:1011834"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar abiotrophy, sheep","secondary_identifiers":["OMIA:000175-9940"],"termid":"MONDO:1012043","xrefs":{"Monarch":{"xref_id":"1012043"}}}


id: PR:Q10426
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rik1 gene.","definition_xrefs":["UniProtKB:Q10426","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin modification-related protein rik1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC11E10.08","synonyms":[{"name":"Spom972h-rik1","type":"exact"},{"name":"silencing protein rik1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10426"}


id: PBO:0040376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase peripheral stalk subunit d pseudogene 4","termid":"PBO:0040376"}


id: PR:O94474
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tetratricopeptide repeat protein 37 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO04988"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"superkiller protein 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1919.05","secondary_identifiers":["UniProtKB:O94474"],"synonyms":[{"name":"Spom972h-TTC37","type":"exact"}],"termid":"PR:O94474"}


id: GO:0070579
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-methylcytosine (5mC) in DNA + 2-oxoglutarate + O2 = 5-hydroxymethylcytosine (5hmC) in DNA + succinate + CO2. This reaction is the first step in the removal of cytosine methylated on position 5 in double-stranded DNA. This activity can iteratively oxidize 5hmC to 5-formylcytosine (5fC) and to 5-carboxylcytosine (5caC).","definition_xrefs":["PMID:19372391","EC:1.14.11.80","PMID:21778364","PMID:21496894"],"direct_ancestors":[{"relation_name":"is_a","term_name":"2-oxoglutarate-dependent dioxygenase activity","termid":"GO:0016706"},{"relation_name":"is_a","term_name":"catalytic activity, acting on DNA","termid":"GO:0140097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"DNA 5-methylcytosine dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-5220952","Reactome:R-HSA-5220990","Reactome:R-HSA-9817458","WIkipedia:DNA_demethylation","Reactome:R-HSA-5221014"],"synonyms":[{"name":"methylcytosine dioxygenase activity","type":"broad"}],"termid":"GO:0070579"}


id: MONDO:0019060
data:
  {"annotated_genes":["SJAG_03429","SJAG_01151","SJAG_03453","SJAG_03905","SJAG_02855","SJAG_05979","SJAG_04287","SJAG_01349","SJAG_01748","SJAG_03881","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89216,89218,89215,89217,89373,89372],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[88146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"},{"annotations":[87310],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010621"},{"annotations":[88717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"},{"annotations":[88778],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007205"},{"annotations":[87644],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007767"},{"annotations":[87645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007768"}]},"cv_name":"mondo","definition":"A benign, intermediate, or malignant neoplasm involving the bone or articular cartilage.","definition_xrefs":["NCIT:C9343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bone disorder","termid":"MONDO:0005381"},{"relation_name":"is_a","term_name":"connective tissue neoplasm","termid":"MONDO:0021581"}],"gene_count":11,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01151":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_02855":null,"SJAG_03429":null,"SJAG_03453":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_04287":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"bone neoplasm","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:0003820","ICD10CM:C40-C41","ONCOTREE:BONE","UMLS:C2732838","GARD:18892","Orphanet:68411","MEDGEN:488993"],"synonyms":[{"name":"bone neoplasm","type":"exact"},{"name":"bone neoplasms","type":"exact"},{"name":"bone tissue neoplasm","type":"exact"},{"name":"bone tissue tumor","type":"exact"},{"name":"bone tissue tumour","type":"exact"},{"name":"bone tumor","type":"exact"},{"name":"bone tumors","type":"exact"},{"name":"bone tumour","type":"exact"},{"name":"bone tumours","type":"exact"},{"name":"neoplasm of bone","type":"exact"},{"name":"neoplasm of bone tissue","type":"exact"},{"name":"neoplasm of the bone","type":"exact"},{"name":"osseous neoplasm","type":"exact"},{"name":"osseous tumor","type":"exact"},{"name":"osseous tumour","type":"exact"},{"name":"primary bone cancer","type":"related"},{"name":"primary malignant neoplasm of bone","type":"related"},{"name":"rare bone tumor","type":"related"},{"name":"rare bone tumour","type":"related"},{"name":"tumor of bone","type":"exact"},{"name":"tumor of bone tissue","type":"exact"},{"name":"tumor of the bone","type":"exact"},{"name":"tumour of bone","type":"exact"},{"name":"tumour of bone tissue","type":"exact"},{"name":"tumour of the bone","type":"exact"}],"termid":"MONDO:0019060","terms_by_termid":{"MONDO:0002629":null,"MONDO:0007205":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0009050":null,"MONDO:0010621":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0019060"}}}


id: PBO:0044100
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cancer/testis antigen family 47 member A8","termid":"PBO:0044100"}


id: PBO:0069772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1055, pseudogene","termid":"PBO:0069772"}


id: PBO:0052370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 18A","termid":"PBO:0052370"}


id: MONDO:0017548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humero-radio-ulnar synostosis","termid":"MONDO:0017983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humero-radio-ulnar synostosis, unilateral","secondary_identifiers":["Orphanet:295205","icd11.foundation:322904301"],"synonyms":[{"name":"humero-radio-ulnar fusion, unilateral","type":"exact"}],"termid":"MONDO:0017548","xrefs":{"Monarch":{"xref_id":"0017548"}}}


id: GO:0052437
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism modulates the frequency, rate or extent of calcium ion fluxes as part of the defense response of the symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by organism of defense-related symbiont calcium ion flux (obsolete GO:0052437)","synonyms":[{"name":"modulation by organism of defense-related symbiont Ca2+ flux","type":"exact"},{"name":"modulation by organism of defense-related symbiont calcium ion flux","type":"exact"}],"termid":"GO:0052437"}


id: FYPO:0001203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype that reflects increased occurrence of coflocculation. In coflocculation, yeast cells coaggregate with cells of another species, usually bacteria.","definition_xrefs":["PMID:11472912","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"coflocculating cells","synonyms":[{"name":"co-flocculating cells","type":"exact"},{"name":"increased coflocculation","type":"exact"}],"termid":"FYPO:0001203"}


id: MONDO:0012389
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopia","termid":"MONDO:0001384"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"myopia 12, autosomal dominant","secondary_identifiers":["MESH:C566489","MEDGEN:355332","OMIM:609995","UMLS:C1864940"],"synonyms":[{"name":"MYP12","type":"exact"},{"name":"myopia 12","type":"exact"},{"name":"myopia 12, autosomal dominant","type":"exact"}],"termid":"MONDO:0012389","xrefs":{"Monarch":{"xref_id":"0012389"}}}


id: PBO:0085370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphotyrosine-specific protein phosphatase; dephosphorylates a broad range of substrates in vivo, including Fpr3p; localized to the cytoplasm and the mitochondria; proposed to be a negative regulator of filamentation","termid":"PBO:0085370"}


id: PBO:0065248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 20A","termid":"PBO:0065248"}


id: PBO:0068045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 350","termid":"PBO:0068045"}


id: GO:0061603
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction GTP + molybdenum cofactor = diphosphate + guanylyl molybdenum cofactor.","definition_xrefs":["EC:2.7.7.77","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanylyltransferase activity","termid":"GO:0070568"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016779"}],"interesting_parent_ids":["GO:0016779","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"molybdenum cofactor guanylyltransferase activity","secondary_identifiers":["RHEA:34243"],"termid":"GO:0061603"}


id: PBO:0031885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome methytransferase involved in ribosome assembly Hpm1 (predicted)","termid":"PBO:0031885"}


id: PBO:0084975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(+)-dependent protein deacetylase; deacetylation targets are primarily mitochondrial proteins; involved along with Hst3p in silencing at telomeres, cell cycle progression, radiation resistance, genomic stability and short-chain fatty acid metabolism; accumulates in mitochondria in response to biotin starvation and may link biotin metabolism with energy homeostasis; member of the Sir2 family and may be the functional equivalent of human SIRT3","termid":"PBO:0084975"}


id: GO:0009045
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-D-xylose = alpha-D-xylulofuranose.","definition_xrefs":["RHEA:22816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0003674"],"is_obsolete":false,"name":"xylose isomerase activity","secondary_identifiers":["EC:5.3.1.5","MetaCyc:XYLISOM-RXN"],"synonyms":[{"name":"D-xylose aldose-ketose-isomerase activity","type":"related"},{"name":"D-xylose isomerase activity","type":"related"},{"name":"D-xylose ketoisomerase activity","type":"related"},{"name":"D-xylose ketol-isomerase activity","type":"related"}],"termid":"GO:0009045"}


id: PBO:0012584
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by H. sapiens CDK1","termid":"PBO:0012584"}


id: PBO:0067602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 766, pseudogene","termid":"PBO:0067602"}


id: PBO:0004445
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRde-Like","termid":"PBO:0004445"}


id: GO:0061189
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency, or extent of the progression of the sclerotome over time, from its initial formation to the mature structure. The sclerotome is the portion of the somite that will give rise to a vertebra.","definition_xrefs":["GOC:dph","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of sclerotome development","termid":"GO:0061190"},{"relation_name":"positively_regulates","term_name":"sclerotome development","termid":"GO:0061056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of sclerotome development","termid":"GO:0061189"}


id: MONDO:0030374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"WHIM syndrome","termid":"MONDO:0023880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHIM syndrome 2","secondary_identifiers":["MEDGEN:1785594","UMLS:C5543622","DOID:0060973","OMIM:619407"],"synonyms":[{"name":"WHIMS2","type":"exact"}],"termid":"MONDO:0030374","xrefs":{"Monarch":{"xref_id":"0030374"}}}


id: FYPO:0006685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed during mating in which the localization of a protein produced by one cell to the nucleus of its mating partner (i.e. of the opposite mating type) does not occur. Such protein localization normally occurs after cell fusion but prior to karyogamy.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished protein localization to nucleus","termid":"FYPO:0003450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to mating partner nucleus in zygote","synonyms":[{"name":"abolished protein localisation to conjugation partner nucleus in zygote","type":"exact"},{"name":"abolished protein localisation to mating partner nucleus in zygote","type":"exact"},{"name":"abolished protein localization to nucleus of opposite mating type cell","type":"exact"},{"name":"abolished protein localization to partner nucleus during mating","type":"exact"},{"name":"nuclear exclusion from mating partner nucleus in zygote","type":"related"},{"name":"protein localization to mating partner nucleus abolished in zygote","type":"exact"}],"termid":"FYPO:0006685"}


id: GO:0007441
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anterior midgut (ectodermal) are generated and organized.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"morphogenesis of an epithelium","termid":"GO:0002009"},{"relation_name":"part_of","term_name":"ectodermal digestive tract morphogenesis","termid":"GO:0048567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anterior midgut (ectodermal) morphogenesis","termid":"GO:0007441"}


id: PBO:0048345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 56","termid":"PBO:0048345"}


id: GO:1903236
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of leukocyte tethering or rolling.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18308860","GOC:als"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of leukocyte adhesion to vascular endothelial cell","termid":"GO:1904994"},{"relation_name":"regulates","term_name":"leukocyte tethering or rolling","termid":"GO:0050901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"regulation of leukocyte tethering or rolling","termid":"GO:1903236"}


id: MONDO:0022094
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"excluded_subClassOf","term_name":"intellectual disability","termid":"MONDO:0001071"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cartwright Nelson Fryns syndrome","secondary_identifiers":["MESH:C535917","UMLS:C2931062","MEDGEN:443968"],"synonyms":[{"name":"Growth retardation, severe intellectual disability, acral limb deficiencies with poorly keratinized nails","type":"related"},{"name":"Growth retardation, severe mental retardation, acral limb deficiencies with poorly keratinized nails","type":"related"}],"termid":"MONDO:0022094","xrefs":{"Monarch":{"xref_id":"0022094"}}}


id: PBO:0053995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1317","termid":"PBO:0053995"}


id: GO:0033203
data:
  {"annotated_genes":["SJAG_03495"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[120255],"is_not":false,"summary":null,"term":"GO:0033203"}]},"cv_name":"cellular_component","definition":"A homohexameric protein complex that possesses DNA helicase activity; associates with DNA polymerase alpha-primase and translocates in the 5' to 3' direction.","definition_xrefs":["PMID:9341218"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase complex","termid":"GO:0033202"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03495":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"DNA helicase A complex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0033203","terms_by_termid":{"GO:0033203":null}}


id: MONDO:0012269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"3q29 microdeletion syndrome is a recurrent subtelomeric deletion syndrome with variable clinical manifestations including intellectual deficit and dysmorphic features.","definition_xrefs":["Orphanet:65286"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 3","termid":"MONDO:0016902"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 3q29 microdeletion syndrome","secondary_identifiers":["OMIM:609425","GARD:11974","UMLS:C2674949","MEDGEN:393265","DECIPHER:37","SCTID:716456000","DOID:0060419","MESH:C567184"],"synonyms":[{"name":"3q subtelomere deletion syndrome","type":"exact"},{"name":"3q29 deletion","type":"related"},{"name":"3q29 deletion syndrome","type":"related"},{"name":"3q29 microdeletion syndrome","type":"exact"},{"name":"3qter deletion","type":"exact"},{"name":"Del(3)(q29)","type":"exact"},{"name":"chromosome 3q29 deletion syndrome","type":"related"},{"name":"chromosome 3q29 microdeletion syndrome, isolated cases","type":"exact"},{"name":"microdeletion 3Q29 syndrome","type":"related"},{"name":"monosomy 3q29","type":"exact"},{"name":"monosomy 3qter","type":"exact"}],"termid":"MONDO:0012269","xrefs":{"Monarch":{"xref_id":"0012269"}}}


id: FYPO:0001955
data:
  {"alleles_by_uniquename":{"SJAG_00514:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00514","name":"scd1delta","uniquename":"SJAG_00514:allele-1"},"SJAG_01794:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01794","name":"scd2delta","uniquename":"SJAG_01794:allele-1"},"SJAG_02819:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02819","name":"efc25delta","uniquename":"SJAG_02819:allele-1"},"SJAG_03453:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03453","name":"ras1delta","uniquename":"SJAG_03453:allele-1"},"SJAG_04703:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04703","name":"for3delta","uniquename":"SJAG_04703:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121696],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0001956"},{"annotations":[121586,121554,121560,121549],"is_not":false,"rel_names":["is_a","has_part"],"summary":null,"term":"FYPO:0002380"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a cell is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type. Spheroid cells may shorter than normal, with approximately the same diameter as normal, or they may be enlarged.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cell shape","termid":"FYPO:0001126"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_02819":null,"SJAG_03453":null,"SJAG_04703":null},"genotype_count":5,"genotypes_by_uniquename":{"efc25delta":{"display_name":"efc25delta","display_uniquename":"efc25delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02819:allele-1","expression":"Null"}]}]},"for3delta":{"display_name":"for3delta","display_uniquename":"for3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04703:allele-1","expression":"Null"}]}]},"ras1delta":{"display_name":"ras1delta","display_uniquename":"ras1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03453:allele-1","expression":"Null"}]}]},"scd1delta":{"display_name":"scd1delta","display_uniquename":"scd1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00514:allele-1","expression":"Null"}]}]},"scd2delta":{"display_name":"scd2delta","display_uniquename":"scd2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01794:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"spheroid cell","references_by_uniquename":{"PMID:29566183":null,"PMID:30726171":null},"single_locus_annotated_genes":["SJAG_02819","SJAG_03453","SJAG_04703","SJAG_00514","SJAG_01794"],"single_locus_genotype_uniquenames":["scd1delta","efc25delta","for3delta","ras1delta","scd2delta"],"synonyms":[{"name":"cell morphology, round cells","type":"related"},{"name":"cell morphology, rounded cells","type":"related"},{"name":"rounded cell","type":"exact"}],"termid":"FYPO:0001955","terms_by_termid":{"FYECO:0000137":null,"FYPO:0001956":null,"FYPO:0002380":null}}


id: FYPO:0007428
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the nucleation of microtubules from the old mitotic spindle pole body begins later than normal.","definition_xrefs":["PomBase:mah","PMID:19487457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule nucleation during vegetative growth","termid":"FYPO:0005692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"delayed onset of mitotic spindle microtubule nucleation from old spindle pole body","synonyms":[{"name":"delayed mitotic spindle microtubule nucleation from old spindle pole body","type":"exact"},{"name":"delayed monopolar mitotic spindle nucleation from old spindle pole body","type":"related"},{"name":"delayed onset of mitotic spindle microtubule nucleation from old SPB","type":"exact"},{"name":"delayed onset of mitotic spindle microtubule nucleation from old spindle pole body during mitotic cell cycle","type":"related"},{"name":"delayed onset of mitotic spindle microtubule nucleation from old spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0007428"}


id: FYPO:0007770
data:
  {"alleles_by_uniquename":{"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121319],"is_not":false,"summary":null,"term":"FYPO:0007770"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which telomere tethering at the nuclear periphery persists after the onset of mitosis. Normally, telomeres are maintained at the nuclear periphery during interphase and released during mitosis.","definition_xrefs":["PomBase:mah","PMID:32109380"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere tethering at nuclear periphery during vegetative growth","termid":"FYPO:0001515"},{"relation_name":"is_a","term_name":"increased heterochromatin tethering at nuclear periphery during mitosis","termid":"FYPO:0007769"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03892":null},"genotype_count":1,"genotypes_by_uniquename":{"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"increased telomere tethering at nuclear periphery during mitosis","references_by_uniquename":{"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_03892"],"single_locus_genotype_uniquenames":["vps4delta"],"synonyms":[{"name":"increased telomere anchoring at nuclear periphery during mitosis","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitosis during mitotic cell cycle","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitosis during vegetative growth","type":"exact"},{"name":"increased telomere tethering at nuclear periphery during mitotic M phase","type":"related"},{"name":"increased telomere tethering at nuclear periphery during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0007770","terms_by_termid":{"FYPO:0007770":null,"FYPO_EXT:0000001":null}}


id: MONDO:0044631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"early-onset familial noncirrhotic portal hypertension","secondary_identifiers":["Orphanet:494348"],"termid":"MONDO:0044631","xrefs":{"Monarch":{"xref_id":"0044631"}}}


id: PBO:0082150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyltransferase; enzyme mainly responsible for the introduction of saturated very long chain fatty acids into neo-synthesized molecules of phosphatidylinositol; required for incorporation of stearic acid into phosphatidylinositol; affects chromosome stability when overexpressed; CST26 has a paralog, YDR018C, that arose from the whole genome duplication","termid":"PBO:0082150"}


id: GO:0009449
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of gamma-aminobutyric acid (GABA, 4-aminobutyrate), an amino acid which acts as a neurotransmitter in some organisms.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid biosynthetic process","termid":"GO:0008652"},{"relation_name":"is_a","term_name":"gamma-aminobutyric acid metabolic process","termid":"GO:0009448"},{"relation_name":"is_a","term_name":"non-proteinogenic amino acid biosynthetic process","termid":"GO:0170043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"gamma-aminobutyric acid biosynthetic process","secondary_identifiers":["Reactome:R-HSA-888568"],"synonyms":[{"name":"4-aminobutanoate biosynthesis","type":"exact"},{"name":"4-aminobutanoate biosynthetic process","type":"exact"},{"name":"4-aminobutyrate biosynthesis","type":"exact"},{"name":"4-aminobutyrate biosynthetic process","type":"exact"},{"name":"GABA biosynthesis","type":"exact"},{"name":"GABA biosynthetic process","type":"exact"},{"name":"gamma-aminobutyric acid anabolism","type":"exact"},{"name":"gamma-aminobutyric acid biosynthesis","type":"exact"},{"name":"gamma-aminobutyric acid formation","type":"exact"},{"name":"gamma-aminobutyric acid synthesis","type":"exact"}],"termid":"GO:0009449"}


id: MONDO:0008314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pronation-supination of the forearm, impairment of","secondary_identifiers":["OMIM:176800","MESH:C566757","UMLS:C1867726","MEDGEN:356828"],"synonyms":[{"name":"pronation-supination of the forearm, impairment of","type":"exact"}],"termid":"MONDO:0008314","xrefs":{"Monarch":{"xref_id":"0008314"}}}


id: PBO:0072953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"saccharopine dehydrogenase (putative)","termid":"PBO:0072953"}


id: PBO:0028485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_IMP_cyclohydrolase_activity","termid":"PBO:0028485"}


id: MONDO:0006744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An accumulation of endolymph in the inner ear (labyrinth) leading to buildup of pressure and distortion of intralabyrinthine structures, such as cochlea and semicircular canals. It is characterized by sensorineural hearing loss; tinnitus; and sometimes vertigo.","definition_xrefs":["MESH:D018159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral vertigo","termid":"MONDO:0004900"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endolymphatic hydrops","secondary_identifiers":["UMLS:C0206586","DOID:9848","MEDGEN:60183","ICD9:386.8","SCTID:27621000119100","EFO:1000918","MedDRA:10049934"],"synonyms":[{"name":"labyrinthine hydrops","type":"exact"}],"termid":"MONDO:0006744","xrefs":{"Monarch":{"xref_id":"0006744"}}}


id: GO:0030795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a jasmonate = S-adenosyl-L-homocysteine + a methyljasmonate.","definition_xrefs":["RHEA:13349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016740","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"methyl jasmonate methylesterase activity","secondary_identifiers":["GO:0102078","GO:0045546","EC:2.1.1.141","MetaCyc:RXN-10768"],"synonyms":[{"name":"S-adenosyl-L-methionine:jasmonate O-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:jasmonic acid carboxyl methyltransferase activity","type":"exact"},{"name":"jasmonic acid carboxyl methyltransferase activity","type":"related"}],"termid":"GO:0030795"}


id: MONDO:0004042
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neoplasm of the urethra in which the epithelial cells grow downward into the underlying supportive tissue.","definition_xrefs":["NCIT:C6173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral urothelial papilloma","termid":"MONDO:0002221"},{"relation_name":"is_a","term_name":"inverted urothelial papilloma","termid":"MONDO:0021109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethra inverted papilloma","secondary_identifiers":["MEDGEN:237034","UMLS:C1336887","DOID:6934"],"synonyms":[{"name":"inverted papilloma of the urethra","type":"exact"},{"name":"inverted papilloma of urethra","type":"exact"},{"name":"urethra inverted papilloma","type":"exact"},{"name":"urethral inverted papilloma","type":"exact"}],"termid":"MONDO:0004042","xrefs":{"Monarch":{"xref_id":"0004042"}}}


id: GO:0047930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-glucosaminate = 2-dehydro-3-deoxy-D-gluconate + NH3.","definition_xrefs":["EC:4.3.1.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ammonia-lyase activity","termid":"GO:0016841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"glucosaminate ammonia-lyase activity","secondary_identifiers":["GO:0050443","MetaCyc:4.3.1.21-RXN","RHEA:12488"],"synonyms":[{"name":"2-amino-2-deoxy-D-gluconate ammonia-lyase activity","type":"related"},{"name":"2-amino-2-deoxy-D-gluconate hydro-lyase (deaminating) activity","type":"related"},{"name":"D-glucosaminate ammonia-lyase (isomerizing; 2-dehydro-3-deoxy-D-gluconate-forming)","type":"related"},{"name":"D-glucosaminate ammonia-lyase activity","type":"related"},{"name":"D-glucosaminate dehydratase activity","type":"related"},{"name":"D-glucosaminic acid dehydrase activity","type":"related"},{"name":"acetylenemonocarboxylic acid hydrase activity","type":"related"},{"name":"aminodeoxygluconate ammonia-lyase activity","type":"exact"},{"name":"aminodeoxygluconate dehydratase activity","type":"exact"},{"name":"glucosaminic dehydrase activity","type":"related"}],"termid":"GO:0047930"}


id: GO:0051168
data:
  {"annotated_genes":["SJAG_01715","SJAG_05328","SJAG_03719","SJAG_01391","SJAG_04310","SJAG_04464","SJAG_00471","SJAG_02757","SJAG_04188","SJAG_03300","SJAG_03283","SJAG_01185","SJAG_00753","SJAG_01338","SJAG_04645","SJAG_01652","SJAG_02250","SJAG_04115","SJAG_03012","SJAG_02209","SJAG_04589","SJAG_03002","SJAG_02861","SJAG_03156","SJAG_01339","SJAG_04480","SJAG_03882","SJAG_04017","SJAG_04656","SJAG_01584","SJAG_03847","SJAG_01358","SJAG_03299","SJAG_01065","SJAG_04347","SJAG_00093","SJAG_02210","SJAG_00375","SJAG_03986","SJAG_01280","SJAG_00992","SJAG_01529","SJAG_04366","SJAG_04308","SJAG_00298","SJAG_04721","SJAG_02274","SJAG_04202","SJAG_01534","SJAG_02661","SJAG_04622","SJAG_01449","SJAG_00178","SJAG_04083","SJAG_03836","SJAG_03693","SJAG_02704","SJAG_04148","SJAG_00641","SJAG_04360","SJAG_01013","SJAG_02534","SJAG_03593","SJAG_04379","SJAG_02520","SJAG_03729","SJAG_01083","SJAG_04312","SJAG_01245","SJAG_04536","SJAG_01805","SJAG_04940","SJAG_01374","SJAG_04472","SJAG_04400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63503,82134,119330,78627,103172,79454,91495,61928,74666,76028,74750],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[75134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[82357,111905,116518,75704,113176,73343,103417,76659,76088,76413,79270,105959,113804,118372,71846,77630,98545,75133,104666,98957,117862,121009,112477,74980,76319,94203,103883,109668,118114,120090],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[95818,103871,102461,113067],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0046827"},{"annotations":[65838,120091,111633,73530,119741,103174,95178,119457,66196],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006611"},{"annotations":[78072,107774,82136,101652,78591,79087,93660,118287,119742],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000055"},{"annotations":[78073,71819,72309,82137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000056"},{"annotations":[61107,91016,103418,96000,98139,107412,108190,93736,73472,105960,102433,113498,78345,116263,112480,81425,96994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000054"},{"annotations":[96001,107091,77534,98140,82022,77092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[107304,107775,74107,80507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[81488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of substances out of the nucleus.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleocytoplasmic transport","termid":"GO:0006913"}],"gene_count":75,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00753":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01245":null,"SJAG_01280":null,"SJAG_01338":null,"SJAG_01339":null,"SJAG_01358":null,"SJAG_01374":null,"SJAG_01391":null,"SJAG_01449":null,"SJAG_01529":null,"SJAG_01534":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_01805":null,"SJAG_02209":null,"SJAG_02210":null,"SJAG_02250":null,"SJAG_02274":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_02861":null,"SJAG_03002":null,"SJAG_03012":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03719":null,"SJAG_03729":null,"SJAG_03836":null,"SJAG_03847":null,"SJAG_03882":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04188":null,"SJAG_04202":null,"SJAG_04308":null,"SJAG_04310":null,"SJAG_04312":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04366":null,"SJAG_04379":null,"SJAG_04400":null,"SJAG_04464":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_04940":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006913"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0006913","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear export","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"export from nucleus","type":"exact"},{"name":"nucleus export","type":"exact"},{"name":"substance nuclear export","type":"exact"}],"termid":"GO:0051168","terms_by_termid":{"GO:0000054":null,"GO:0000055":null,"GO:0000056":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0006611":null,"GO:0016973":null,"GO:0031990":null,"GO:0046827":null,"GO:0071528":null}}


id: FYPO:0001577
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which a cell population does not grow in a medium containing a tetrapeptide such as Leu-Ser-Lys-Leu as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished vegetative cell population growth","termid":"FYPO:0001575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002058","FYPO:0002057","FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"abolished cell population growth on tetrapeptide nitrogen source","synonyms":[{"name":"abolished growth on tetrapeptide nitrogen source","type":"broad"},{"name":"abolished tetrapeptide utilization","type":"related"},{"name":"abolished vegetative cell population growth on tetrapeptide nitrogen source","type":"exact"},{"name":"cell population growth on tetrapeptide nitrogen source abolished","type":"exact"}],"termid":"FYPO:0001577"}


id: GO:0072429
data:
  {"annotated_genes":["SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106174],"is_not":false,"summary":null,"term":"GO:0072429"}]},"cv_name":"biological_process","definition":"A process that occurs in response to signals generated as a result of intra-S DNA damage checkpoint signaling.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to DNA damage checkpoint signaling","termid":"GO:0072423"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04183":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to intra-S DNA damage checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"intra-S DNA damage checkpoint effector process","type":"exact"},{"name":"response to signal involved in intra-S DNA damage checkpoint","type":"exact"}],"termid":"GO:0072429","terms_by_termid":{"GO:0072429":null}}


id: PBO:0078629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 80, pseudogene","termid":"PBO:0078629"}


id: GO:0097686
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A horn-shaped dinoflagellate apex found in thecate species.","definition_xrefs":["PMID:7002229","GOC:at"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinoflagellate apex","termid":"GO:0097683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"dinoflagellate apical horn","termid":"GO:0097686"}


id: _global:assayed_protein
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extension_relations","definition":"Relation between a phenotype and a protein gene product with which the phenotype was assayed.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"assayed_using","termid":"_global:assayed_using"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"assayed_protein","termid":"_global:assayed_protein"}


id: PBO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H2 complex subunit Rnh201 (predicted)","termid":"PBO:0001448"}


id: GO:1900895
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tridecane metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of tridecane metabolic process","termid":"GO:1900893"},{"relation_name":"positively_regulates","term_name":"tridecane metabolic process","termid":"GO:1900631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of tridecane metabolic process","synonyms":[{"name":"activation of tridecane metabolic process","type":"narrow"},{"name":"activation of tridecane metabolism","type":"narrow"},{"name":"positive regulation of tridecane metabolism","type":"related"},{"name":"up regulation of tridecane metabolic process","type":"exact"},{"name":"up regulation of tridecane metabolism","type":"related"},{"name":"up-regulation of tridecane metabolic process","type":"exact"},{"name":"up-regulation of tridecane metabolism","type":"related"},{"name":"upregulation of tridecane metabolic process","type":"exact"},{"name":"upregulation of tridecane metabolism","type":"related"}],"termid":"GO:1900895"}


id: PBO:0069121
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 370, pseudogene","termid":"PBO:0069121"}


id: GO:1903903
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment of T cell polarity.","definition_xrefs":["GOC:als","GOC:TermGenie","GO_REF:0000058","PMID:23575248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment of cell polarity","termid":"GO:2000114"},{"relation_name":"regulates","term_name":"establishment of T cell polarity","termid":"GO:0001768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment of T cell polarity","synonyms":[{"name":"regulation of T cell polarization","type":"exact"},{"name":"regulation of T lymphocyte polarization","type":"exact"},{"name":"regulation of T-cell polarization","type":"exact"},{"name":"regulation of establishment of T lymphocyte polarity","type":"exact"},{"name":"regulation of establishment of T-cell polarity","type":"exact"},{"name":"regulation of establishment of T-lymphocyte polarity","type":"exact"}],"termid":"GO:1903903"}


id: PBO:0028379
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_hypoxanthine_DNA_N-glycosylase_activity","termid":"PBO:0028379"}


id: GO:0002862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of an inflammatory response to an antigenic stimulus.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inflammatory response to antigenic stimulus","termid":"GO:0002861"},{"relation_name":"is_a","term_name":"negative regulation of inflammatory response","termid":"GO:0050728"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"inflammatory response to antigenic stimulus","termid":"GO:0002437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of inflammatory response to antigenic stimulus","secondary_identifiers":["Reactome:R-HSA-9664323","Reactome:R-HSA-9662834","Reactome:R-HSA-9660821","Reactome:R-HSA-9664535"],"synonyms":[{"name":"down regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"down-regulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"downregulation of inflammatory response to antigenic stimulus","type":"exact"},{"name":"inhibition of inflammatory response to antigenic stimulus","type":"narrow"}],"termid":"GO:0002862"}


id: GO:0034856
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2E,4E)-2-hydroxyhexa-2,4-dienoate + H2O = 4-hydroxy-2-oxohexanoate.","definition_xrefs":["UM-BBD_reactionID:r1281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"2-hydroxyhexa-2,4-dienoate hydratase activity","secondary_identifiers":["EC:4.2.1.132","RHEA:32535"],"termid":"GO:0034856"}


id: PBO:0039118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AIDA pseudogene 1","termid":"PBO:0039118"}


id: MONDO:0009891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycythemia vera (PV) is an acquired myeloproliferative disorder characterized by an elevated absolute red blood cell mass caused by uncontrolled red blood cell production, frequently associated with uncontrolled white blood cell and platelet production.","definition_xrefs":["Orphanet:729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial polycythemia","termid":"MONDO:0001115"},{"relation_name":"is_a","term_name":"erythroid neoplasm","termid":"MONDO:0020703"},{"relation_name":"is_a","term_name":"hereditary disorder of connective tissue","termid":"MONDO:0023603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acquired polycythemia vera","secondary_identifiers":["ICD10CM:D45","ONCOTREE:PV","MedDRA:10036057","NCIT:C3336","DOID:8997","OMIM:263300","MEDGEN:45996","NANDO:2100186","ICD9:238.4","UMLS:C0032463","EFO:0002429","icd11.foundation:818364947","ICDO:9950/3","MESH:D011087","NANDO:2200643","GARD:7422"],"synonyms":[{"name":"Osler-Vaquez disease","type":"exact"},{"name":"Osler-Vaquez syndrome","type":"exact"},{"name":"PRV","type":"related"},{"name":"PV","type":"exact"},{"name":"Vaquez disease","type":"exact"},{"name":"acquired primary erythrocytosis","type":"exact"},{"name":"polycythaemia rubra vera","type":"exact"},{"name":"polycythemia rubra vera","type":"exact"},{"name":"polycythemia vera","type":"exact"},{"name":"polycythemia vera, somatic","type":"exact"},{"name":"primary polycythemia","type":"related"},{"name":"proliferative polycythaemia","type":"exact"}],"termid":"MONDO:0009891","xrefs":{"Monarch":{"xref_id":"0009891"}}}


id: PBO:0054817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2230","termid":"PBO:0054817"}


id: PBO:0086830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; YPL039W is not an essential gene","termid":"PBO:0086830"}


id: GO:0046428
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1,4-dihydroxy-2-naphthoate + an all-trans-polyprenyl diphosphate + H+ = a 2-demethylmenaquinol + CO2 + diphosphate.","definition_xrefs":["RHEA:26478"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016765","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoate polyprenyltransferase activity","secondary_identifiers":["EC:2.5.1.74","MetaCyc:RXN-11047"],"synonyms":[{"name":"1,4-dihydroxy-2-naphtoate prenyltransferase activity","type":"exact"}],"termid":"GO:0046428"}


id: PBO:0017715
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana GRF9","termid":"PBO:0017715"}


id: GO:0034584
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a piRNA, a Piwi-associated RNA, a 24- to 30-nucleotide RNA derived from repeat or complex DNA sequence elements and processed by a Dicer-independent mechanism.","definition_xrefs":["GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulatory RNA binding","termid":"GO:0061980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"piRNA binding","synonyms":[{"name":"Piwi-associated RNA binding","type":"exact"}],"termid":"GO:0034584"}


id: MONDO:0017113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Isolated bilateral hemispheric cerebellar hypoplasia is a rare cerebellar malformation characterized by hypoplasia of both cerebellar hemispheres with no other cerebellar/cerebral anomaly or other associated clinical feature. Affected patients present with mild hypotonia with motor delay, mild cognitive impairment, language delay, visuospatial and verbal memory deficits, dysdiadochokinesis, intentional tremor, and possible presence of emotional fragility and mild depression.","definition_xrefs":["Orphanet:269221"],"direct_ancestors":[{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"isolated bilateral hemispheric cerebellar hypoplasia","secondary_identifiers":["UMLS:C4749791","icd11.foundation:1366151963","GARD:20996","MEDGEN:1657026"],"termid":"MONDO:0017113","xrefs":{"Monarch":{"xref_id":"0017113"}}}


id: SO:0000271
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tRNA sequence that has a tryptophan anticodon, and a 3' tryptophan binding region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"tryptophan_tRNA_primary_transcript","termid":"SO:0000228"},{"relation_name":"is_a","term_name":"tRNA","termid":"SO:0000253"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tryptophanyl_tRNA","synonyms":[{"name":"tryptophanyl tRNA","type":"exact"},{"name":"tryptophanyl-transfer RNA","type":"exact"},{"name":"tryptophanyl-transfer ribonucleic acid","type":"exact"}],"termid":"SO:0000271"}


id: GO:0039556
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to MDA-5, a cytoplasmic pattern recognition receptor that initiates an antiviral signaling pathway upon binding to viral dsRNA.","definition_xrefs":["PMID:19019954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"MDA-5 binding","synonyms":[{"name":"MDA5 binding","type":"exact"}],"termid":"GO:0039556"}


id: GO:0061572
data:
  {"annotated_genes":["SJAG_02864","SJAG_04522","SJAG_04498","SJAG_04621","SJAG_03011","SJAG_03088","SJAG_04703","SJAG_01943","SJAG_00279","SJAG_00970","SJAG_00938","SJAG_01388","SJAG_00677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101661],"is_not":false,"summary":null,"term":"GO:0061572"},{"annotations":[76899,78269,95834,77520,73414,77978,79209],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051017"},{"annotations":[118237],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061573"},{"annotations":[100038,100296,110171,91336],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071520"},{"annotations":[110173,118239],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070649"},{"annotations":[59546],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110009"},{"annotations":[109648],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032231"}]},"cv_name":"biological_process","definition":"A process that results in the assembly, arrangement of constituent parts, or disassembly of an actin filament bundle.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament organization","termid":"GO:0007015"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00677":null,"SJAG_00938":null,"SJAG_00970":null,"SJAG_01388":null,"SJAG_01943":null,"SJAG_02864":null,"SJAG_03011":null,"SJAG_03088":null,"SJAG_04498":null,"SJAG_04522":null,"SJAG_04621":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0030036"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0030036","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"actin filament bundle organization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"actin filament cable organization","type":"related"}],"termid":"GO:0061572","terms_by_termid":{"GO:0032231":null,"GO:0051017":null,"GO:0061572":null,"GO:0061573":null,"GO:0070649":null,"GO:0071520":null,"GO:0110009":null}}


id: PBO:0072196
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S17 pseudogene 13","termid":"PBO:0072196"}


id: GO:0043583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ear over time, from its formation to the mature structure. The ear is the sense organ in vertebrates that is specialized for the detection of sound, and the maintenance of balance. Includes the outer ear and middle ear, which collect and transmit sound waves; and the inner ear, which contains the organs of balance and (except in fish) hearing. Also includes the pinna, the visible part of the outer ear, present in some mammals.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ear development","synonyms":[{"name":"hearing organ development","type":"exact"}],"termid":"GO:0043583"}


id: PBO:0055434
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2864","termid":"PBO:0055434"}


id: PR:P0CT77
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1101 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P0CT77"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L11-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.07c","synonyms":[{"name":"Spom972h-rpl1101","type":"exact"}],"termid":"PR:P0CT77"}


id: MONDO:0043152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"arthritic joint disease","termid":"MONDO:0005578"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative rheumatoid factor polyarthritis","secondary_identifiers":["MESH:C538347","UMLS:C2931825","NANDO:2201057","MEDGEN:444150"],"synonyms":[{"name":"RF-ve CP","type":"related"},{"name":"rheumatoid factor negative erosive chronic polyarthritis","type":"related"},{"name":"rheumatoid factor-negative polyarthritis","type":"related"}],"termid":"MONDO:0043152","xrefs":{"Monarch":{"xref_id":"0043152"}}}


id: PBO:0076810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENM3 antisense transcript 1","termid":"PBO:0076810"}


id: GO:0032087
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of a type IV restriction endodeoxyribonuclease activity.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of type IV site-specific deoxyribonuclease activity (obsolete GO:0032087)","synonyms":[{"name":"regulation of type IV restriction endodeoxyribonuclease activity","type":"exact"},{"name":"type IV restriction endodeoxyribonuclease regulator","type":"related"},{"name":"type IV restriction enzyme regulator","type":"related"}],"termid":"GO:0032087"}


id: MONDO:0032608
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial complex 1 deficiency, nuclear type 3","secondary_identifiers":["UMLS:C4748752","GARD:16313","DOID:0112093","MEDGEN:1648346","OMIM:618224"],"synonyms":[{"name":"MC1DN3","type":"related"},{"name":"MITOCHONDRIAL COMPLEX I DEFICIENCY, NUCLEAR TYPE 3","type":"related"}],"termid":"MONDO:0032608","xrefs":{"Monarch":{"xref_id":"0032608"}}}


id: PBO:0049081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 137","termid":"PBO:0049081"}


id: MONDO:0008681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"WAGR syndrome (Wilms tumor - aniridia - genitourinary anomalies - intellectual disability mental retardation) is a rare genetic disorder characterized by an unusual complex of congenital developmental abnormalities with intellectual disability, and an increased risk of developing Wilms tumor.","definition_xrefs":["Orphanet:893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"},{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 11","termid":"MONDO:0016893"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAGR syndrome","secondary_identifiers":["NORD:1833","MESH:D017624","NCIT:C3718","OMIM:194072","SCTID:715215007","GARD:5528","MEDGEN:64512","UMLS:C0206115","DECIPHER:35","icd11.foundation:1858307812","DOID:14515"],"synonyms":[{"name":"11p deletion","type":"related"},{"name":"11p deletion syndrome","type":"related"},{"name":"11p monosomy","type":"related"},{"name":"11p partial monosomy syndrome","type":"exact"},{"name":"AGR triad","type":"related"},{"name":"Del(11)(p13)","type":"exact"},{"name":"WAGR","type":"related"},{"name":"WAGR 11p13 deletion syndrome","type":"exact"},{"name":"WAGR Complex","type":"related"},{"name":"WAGR Syndrome/11p Deletion Syndrome","type":"exact"},{"name":"WAGR syndrome","type":"exact"},{"name":"Wilms tumor, aniridia, genitourinary anomalies and developmental delay syndrome","type":"exact"},{"name":"Wilms tumor, aniridia, genitourinary anomalies and mental retardation syndrome, autosomal dominant, somatic mutation","type":"exact"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, and intellectual disability syndrome","type":"related"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, and mental retardation syndrome","type":"related"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, intellectual disability syndrome","type":"related"},{"name":"Wilms tumor, aniridia, genitourinary anomalies, mental retardation syndrome","type":"related"},{"name":"Wilms tumor-aniridia-genitourinary anomalies-intellectual disability syndrome","type":"exact"},{"name":"Wilms tumor-aniridia-genitourinary anomalies-mental retardation syndrome","type":"exact"},{"name":"Wilms tumor-aniridia-gonadoblastoma-intellectual disability syndrome","type":"related"},{"name":"Wilms tumor-aniridia-gonadoblastoma-mental retardation syndrome","type":"related"},{"name":"chromosome 11P13 deletion syndrome","type":"related"},{"name":"chromosome 11p deletion","type":"related"},{"name":"chromosome 11p deletion syndrome","type":"related"},{"name":"chromosome 11p13 deletion syndrome","type":"exact"},{"name":"deletion 11p","type":"related"},{"name":"deletion 11p13","type":"exact"},{"name":"monosomy 11p","type":"related"},{"name":"monosomy 11p13","type":"exact"},{"name":"partial monosomy 11p","type":"related"}],"termid":"MONDO:0008681","xrefs":{"Monarch":{"xref_id":"0008681"}}}


id: PR:O74553
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-dihydrouridine synthase 4-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04755","PRO:DNx","PANTHER:PTHR11082:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-dihydrouridine(20a/20b) synthase [NAD(P)+] (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.15","secondary_identifiers":["UniProtKB:O74553"],"synonyms":[{"name":"Spom972h-DUS4L","type":"exact"},{"name":"tRNA-dihydrouridine synthase 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74553"}


id: GO:0018847
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: alpha-pinene = limonene.","definition_xrefs":["UM-BBD_reactionID:r0712"],"gene_count":0,"genotype_count":0,"name":"obsolete alpha-pinene lyase activity (obsolete GO:0018847)","termid":"GO:0018847"}


id: MONDO:0019381
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eastern equine encephalitis (obsolete MONDO:0019381)","termid":"MONDO:0019381","xrefs":{"Monarch":{"xref_id":"0019381"}}}


id: GO:0160149
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: uridine(65) in tRNA = pseudouridine(65) in tRNA.","definition_xrefs":["EC:5.4.99.26"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA pseudouridine synthase activity","termid":"GO:0106029"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0003824","GO:0016853","GO:0140098"],"is_obsolete":false,"name":"tRNA pseudouridine(65) synthase activity","secondary_identifiers":["RHEA:42536"],"termid":"GO:0160149"}


id: GO:0032565
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to dGMP, deoxyguanosine monophosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"guanyl deoxyribonucleotide binding","termid":"GO:0032560"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"dGMP binding","termid":"GO:0032565"}


id: GO:0001702
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gastrulation process in which the initial invagination becomes the anus and the mouth forms second.","definition_xrefs":["GOC:go_curators","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrulation","termid":"GO:0007369"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastrulation with mouth forming second","secondary_identifiers":["GO:0048276","GO:0010003"],"synonyms":[{"name":"deuterostomic gastrulation","type":"exact"}],"termid":"GO:0001702"}


id: PBO:0035901
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K56_acetylation_at_centromere_outer_repeat_during_vegetative_growth","termid":"PBO:0035901"}


id: PBO:0074869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 53","termid":"PBO:0074869"}


id: SO:0000445
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Non-coding exon in the 5' UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"noncoding_exon","termid":"SO:0000198"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_prime_noncoding_exon","synonyms":[{"name":"5' nc exon","type":"exact"},{"name":"5' non coding exon","type":"exact"},{"name":"five prime noncoding exon","type":"exact"}],"termid":"SO:0000445"}


id: GO:0070418
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that is involved in the repair of DNA double-strand breaks and, in mammals, V(D)J recombination events. It consists of the DNA-dependent protein kinase catalytic subunit (DNA-PKcs) and the DNA end-binding heterodimer Ku.","definition_xrefs":["GOC:mah","PMID:10854421","PMID:12235392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"},{"relation_name":"is_a","term_name":"serine/threonine protein kinase complex","termid":"GO:1902554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005634"],"is_obsolete":false,"name":"DNA-dependent protein kinase complex","synonyms":[{"name":"DNA-PK complex","type":"exact"},{"name":"DNA-PK-Ku antigen complex","type":"exact"},{"name":"DNA-dependent protein kinase, DNA-end-binding complex","type":"narrow"}],"termid":"GO:0070418"}


id: PBO:0063084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progestin and adipoQ receptor family member 3","termid":"PBO:0063084"}


id: PR:P36616
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An SRSF protein kinase 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02604","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase dsk1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.14c","secondary_identifiers":["UniProtKB:P36616"],"synonyms":[{"name":"Spom972h-SRPK3","type":"exact"},{"name":"dis1-suppressing protein kinase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P36616"}


id: PBO:0068014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 319","termid":"PBO:0068014"}


id: GO:0021639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structure of the trochlear nerve is generated and organized. The trochlear nerve is a motor nerve and is the only cranial nerve to exit the brain dorsally. The trochlear nerve innervates the superior oblique muscle.","definition_xrefs":["GOC:cls","GOC:jid","ISBN:0838580343","GOC:dgh","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranial nerve morphogenesis","termid":"GO:0021602"},{"relation_name":"part_of","term_name":"trochlear nerve development","termid":"GO:0021558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trochlear nerve morphogenesis","synonyms":[{"name":"CH IV morphogenesis","type":"related"}],"termid":"GO:0021639"}


id: GO:1903200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of L-dopa decarboxylase activity.","definition_xrefs":["GO_REF:0000059","GOC:bf","GOC:PARL","GOC:TermGenie","PMID:19703902"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of L-dopa decarboxylase activity (obsolete GO:1903200)","synonyms":[{"name":"activation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"narrow"},{"name":"activation of DDC activity","type":"narrow"},{"name":"activation of DOPA decarboxylase activity","type":"narrow"},{"name":"activation of L-dopa decarboxylase activity","type":"narrow"},{"name":"positive regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"positive regulation of DDC activity","type":"exact"},{"name":"positive regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"up regulation of DDC activity","type":"exact"},{"name":"up regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"up-regulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"up-regulation of DDC activity","type":"exact"},{"name":"up-regulation of DOPA decarboxylase activity","type":"exact"},{"name":"up-regulation of L-dopa decarboxylase activity","type":"exact"},{"name":"upregulation of 4-dihydroxyl-L-phenylalanine decarboxylase activity","type":"exact"},{"name":"upregulation of DDC activity","type":"exact"},{"name":"upregulation of DOPA decarboxylase activity","type":"exact"},{"name":"upregulation of L-dopa decarboxylase activity","type":"exact"}],"termid":"GO:1903200"}


id: GO:0021810
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Signaling by neurotransmitters and their receptors that results in the initiation of movement of cells as a component of the process of glial-mediated radial migration.","definition_xrefs":["PMID:12626695","GOC:cls","GOC:jid","GOC:dgh","GO_REF:0000021","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete neurotransmitter signaling initiating cell movement, involved in cerebral cortex radial glia guided migration (obsolete GO:0021810)","synonyms":[{"name":"neurotransmitter signalling initiating cell movement, involved in cerebral cortex glial-mediated radial migration","type":"exact"}],"termid":"GO:0021810"}


id: PBO:0055896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 17","termid":"PBO:0055896"}


id: PBO:0052559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KLRK1 antisense RNA 1","termid":"PBO:0052559"}


id: PBO:0058253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4540","termid":"PBO:0058253"}


id: MONDO:0008869
data:
  {"annotated_genes":["SJAG_00364"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88779],"is_not":false,"summary":null,"term":"MONDO:0008869"}]},"cv_name":"mondo","definition":"Any Seckel syndrome in which the cause of the disease is a mutation in the ATR gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Seckel syndrome","termid":"MONDO:0019342"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00364":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Seckel syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070007","UMLS:C4551474","OMIM:210600","MEDGEN:1637056","GARD:15143"],"synonyms":[{"name":"ATR Seckel syndrome","type":"exact"},{"name":"Bird-headed dwarfism","type":"related"},{"name":"SCKL1","type":"exact"},{"name":"Sckl","type":"related"},{"name":"Seckel syndrome 1","type":"exact"},{"name":"Seckel syndrome 3","type":"exact"},{"name":"Seckel syndrome caused by mutation in ATR","type":"exact"},{"name":"Seckel syndrome type 1","type":"exact"},{"name":"Seckel-type dwarfism","type":"related"},{"name":"microcephalic primordial dwarfism 1","type":"related"},{"name":"microcephalic primordial dwarfism I","type":"exact"},{"name":"nanocephalic dwarfism","type":"related"}],"termid":"MONDO:0008869","terms_by_termid":{"MONDO:0008869":null},"xrefs":{"Monarch":{"xref_id":"0008869"}}}


id: GO:0016121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of carotenes, hydrocarbon carotenoids.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotene metabolic process","termid":"GO:0016119"},{"relation_name":"is_a","term_name":"terpene catabolic process","termid":"GO:0046247"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"carotene catabolic process","synonyms":[{"name":"carotene breakdown","type":"exact"},{"name":"carotene catabolism","type":"exact"},{"name":"carotene degradation","type":"exact"}],"termid":"GO:0016121"}


id: MONDO:0003765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A melanoma that arises from leptomeningeal melanocytes and occurs in adulthood.","definition_xrefs":["NCIT:C5319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leptomeningeal melanoma","termid":"MONDO:0003761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult leptomeningeal melanoma","secondary_identifiers":["UMLS:C1332204","MEDGEN:231042","DOID:6090"],"synonyms":[{"name":"adult leptomeningeal melanoma","type":"exact"},{"name":"adult meningeal melanoma","type":"exact"},{"name":"melanoma of adult leptomeninges","type":"exact"},{"name":"melanoma of the adult leptomeninges","type":"related"}],"termid":"MONDO:0003765","xrefs":{"Monarch":{"xref_id":"0003765"}}}


id: GO:0071141
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of only SMAD proteins; may be homomeric or heteromeric. Heteromeric complexes act as transcription factors while homomeric complexes exist but are transcriptionally inactive. Hetero- versus homotrimerization is largely enthalpy driven.","definition_xrefs":["GOC:bhm","GOC:mah","PMID:9670020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"SMAD protein complex","synonyms":[{"name":"SMAD complex","type":"exact"}],"termid":"GO:0071141"}


id: PBO:0013092
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. japonicus gtb1","termid":"PBO:0013092"}


id: MONDO:0009382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary hyperbilirubinemia","termid":"MONDO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hyperbilirubinemia, shunt, primary","secondary_identifiers":["OMIM:237800","UMLS:C3550398","MEDGEN:763312"],"synonyms":[{"name":"PSHB","type":"exact"},{"name":"hyperbilirubinemia, shunt, primary","type":"exact"}],"termid":"MONDO:0009382","xrefs":{"Monarch":{"xref_id":"0009382"}}}


id: GO:0009494
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete chloroplast-type ferredoxin (obsolete GO:0009494)","synonyms":[{"name":"chloroplast-type ferredoxin","type":"exact"}],"termid":"GO:0009494"}


id: PBO:0001937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell end marker Tea3","termid":"PBO:0001937"}


id: PBO:0055570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3006","termid":"PBO:0055570"}


id: GO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of the transcript body of a nuclear-transcribed mRNA that occurs when the ends are not protected by the 5'-cap or the 3'-poly(A) tail.","definition_xrefs":["GOC:krc"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear-transcribed mRNA catabolic process, exonucleolytic (obsolete GO:0000291)","synonyms":[{"name":"exonucleolytic degradation of mRNA","type":"exact"},{"name":"mRNA breakdown, exonucleolytic","type":"exact"},{"name":"mRNA degradation, exonucleolytic","type":"exact"},{"name":"nuclear mRNA catabolic process, exonucleolytic","type":"exact"}],"termid":"GO:0000291"}


id: PBO:0030955
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_trimethylation_at_centromere_outer_repeat","termid":"PBO:0030955"}


id: MONDO:1010499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial fibrillation that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial fibrillation, non-human animal","termid":"MONDO:1010024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial fibrillation, horse","secondary_identifiers":["OMIA:001181-9796"],"termid":"MONDO:1010499","xrefs":{"Monarch":{"xref_id":"1010499"}}}


id: MONDO:0024555
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"megalencephalic leukoencephalopathy with subcortical cysts","termid":"MONDO:0011391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","secondary_identifiers":["UMLS:C5779875","DOID:0080316","MEDGEN:1826136","OMIM:604004"],"synonyms":[{"name":"Lvm","type":"related"},{"name":"MLC1","type":"related"},{"name":"VL","type":"related"},{"name":"Vacuolating megalencephalic leukoencephalopathy with subcortical cysts","type":"related"},{"name":"Van Der Knaap disease","type":"related"},{"name":"leukoencephalopathy with swelling and cysts","type":"related"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts","type":"broad"},{"name":"megalencephalic leukoencephalopathy with subcortical cysts 1","type":"exact"}],"termid":"MONDO:0024555","xrefs":{"Monarch":{"xref_id":"0024555"}}}


id: PBO:0060833
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NEDD4 E3 ubiquitin protein ligase","termid":"PBO:0060833"}


id: MONDO:0017068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida aperta","termid":"MONDO:0017062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"upper thoracic spina bifida aperta","secondary_identifiers":["GARD:20957","icd11.foundation:772010291","Orphanet:268740"],"termid":"MONDO:0017068","xrefs":{"Monarch":{"xref_id":"0017068"}}}


id: GO:1900547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A regulation of transcription from RNA polymerase II promoter that results in negative regulation of phenotypic switching.","definition_xrefs":["GOC:TermGenie","GOC:di"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phenotypic switching by regulation of transcription from RNA polymerase II promoter (obsolete GO:1900547)","synonyms":[{"name":"negative regulation of phenotypic dimorphism by regulation of transcription from RNA polymerase II promoter","type":"related"}],"termid":"GO:1900547"}


id: MONDO:0011794
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Dravet syndrome (DS) is a genetic epilepsy of childhood characterized by a variety of drug-resistant seizures often induced by fever, presenting in previously healthy children, and which frequently leads to cognitive and motor impairment.","definition_xrefs":["Orphanet:33069"],"gene_count":0,"genotype_count":0,"name":"obsolete Dravet syndrome (obsolete MONDO:0011794)","termid":"MONDO:0011794","xrefs":{"Monarch":{"xref_id":"0011794"}}}


id: MONDO:1012499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"subclinical hypocalcemia, non-human animal","termid":"MONDO:1011720"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subclinical hypocalcemia, cattle","secondary_identifiers":["OMIA:002048-9913"],"termid":"MONDO:1012499","xrefs":{"Monarch":{"xref_id":"1012499"}}}


id: PBO:0072025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S9 pseudogene 1","termid":"PBO:0072025"}


id: PBO:0063014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAGE family member 2B","termid":"PBO:0063014"}


id: PBO:0081456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 322 pseudogene 1","termid":"PBO:0081456"}


id: PBO:0078036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha joining 26","termid":"PBO:0078036"}


id: PBO:0039663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 3 subunit beta 1","termid":"PBO:0039663"}


id: PBO:0065890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB37, member RAS oncogene family","termid":"PBO:0065890"}


id: GO:0090174
data:
  {"annotated_genes":["SJAG_00826","SJAG_00204","SJAG_02587","SJAG_00430","SJAG_00557","SJAG_02241","SJAG_04023","SJAG_01633","SJAG_00810","SJAG_00380","SJAG_03670","SJAG_05184","SJAG_04978","SJAG_03347","SJAG_04739","SJAG_02595","SJAG_01379","SJAG_01697","SJAG_00171","SJAG_03848","SJAG_03552","SJAG_03536","SJAG_04513","SJAG_03889","SJAG_03403","SJAG_01324","SJAG_02315"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80329],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016320"},{"annotations":[101525,79131,76645,101729,73186,81701],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034058"},{"annotations":[97959],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048210"},{"annotations":[80586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048288"},{"annotations":[77599],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0035493"},{"annotations":[78541,111700,114745,73926,119575,119620,79942,100107,103104,78122,79794,92586,102873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006906"},{"annotations":[75847,79677,78065,58176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048280"}]},"cv_name":"biological_process","definition":"The joining of two lipid bilayers to form a single organelle membrane.","definition_xrefs":["GOC:ascb_2009","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle fusion","termid":"GO:0048284"},{"relation_name":"is_a","term_name":"membrane fusion","termid":"GO:0061025"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00171":null,"SJAG_00204":null,"SJAG_00380":null,"SJAG_00430":null,"SJAG_00557":null,"SJAG_00810":null,"SJAG_00826":null,"SJAG_01324":null,"SJAG_01379":null,"SJAG_01633":null,"SJAG_01697":null,"SJAG_02241":null,"SJAG_02315":null,"SJAG_02587":null,"SJAG_02595":null,"SJAG_03347":null,"SJAG_03403":null,"SJAG_03536":null,"SJAG_03552":null,"SJAG_03670":null,"SJAG_03848":null,"SJAG_03889":null,"SJAG_04023":null,"SJAG_04513":null,"SJAG_04739":null,"SJAG_04978":null,"SJAG_05184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"organelle membrane fusion","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0090174","terms_by_termid":{"GO:0006906":null,"GO:0016320":null,"GO:0034058":null,"GO:0035493":null,"GO:0048210":null,"GO:0048280":null,"GO:0048288":null}}


id: FYPO:0003634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which U1 snRNP binding by a gene product is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal ribonucleoprotein complex binding","termid":"FYPO:0003632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0001985","FYPO:0000702"],"is_obsolete":false,"name":"decreased U1 snRNP binding","synonyms":[{"name":"reduced U1 snRNP binding","type":"exact"}],"termid":"FYPO:0003634"}


id: MONDO:0007485
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87881],"is_not":false,"summary":null,"term":"MONDO:0007485"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal dominant mutation of TERC on chromosome 3q26.2.","definition_xrefs":["DOID:0070014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"},{"relation_name":"is_a","term_name":"telomere syndrome","termid":"MONDO:0100137"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0019303","MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal dominant 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C176921","SCTID:707273001","OMIM:127550","GARD:6299","MESH:C565079","UMLS:C4551974","MEDGEN:1645250"],"synonyms":[{"name":"DKCA","type":"related"},{"name":"DKCA1","type":"exact"},{"name":"autosomal dominant dyskeratosis congenita","type":"related"},{"name":"autosomal dominant dyskeratosis congenita 1","type":"related"},{"name":"dyskeratosis congenita Scoggins type","type":"related"},{"name":"dyskeratosis congenita autosomal dominant","type":"related"},{"name":"dyskeratosis congenita, Scoggins type","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant 1","type":"exact"},{"name":"dyskeratosis congenita, autosomal dominant type 1","type":"exact"}],"termid":"MONDO:0007485","terms_by_termid":{"MONDO:0007485":null},"xrefs":{"Monarch":{"xref_id":"0007485"}}}


id: GO:0031503
data:
  {"annotated_genes":["SJAG_03540","SJAG_00794","SJAG_02299","SJAG_02624","SJAG_03126","SJAG_00727","SJAG_05196","SJAG_02737","SJAG_03683","SJAG_02814","SJAG_01745","SJAG_04076","SJAG_02761","SJAG_01613","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098653"},{"annotations":[91603,104834,112010,119007,93351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072766"},{"annotations":[95808,102401,66951,117985,70394,111183,101234,97326,104450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990571"}]},"cv_name":"biological_process","definition":"A localization process that acts on a protein complex; the complex is transported to, or maintained in, a specific location.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00727":null,"SJAG_00794":null,"SJAG_01613":null,"SJAG_01745":null,"SJAG_01805":null,"SJAG_02299":null,"SJAG_02624":null,"SJAG_02737":null,"SJAG_02761":null,"SJAG_02814":null,"SJAG_03126":null,"SJAG_03540":null,"SJAG_03683":null,"SJAG_04076":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"protein-containing complex localization","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0034629"],"synonyms":[{"name":"cellular protein complex localisation","type":"related"},{"name":"cellular protein complex localization","type":"related"},{"name":"cellular protein-containing complex localization","type":"related"},{"name":"establishment and maintenance of cellular protein complex localization","type":"related"},{"name":"establishment and maintenance of protein complex localization","type":"exact"},{"name":"protein complex localisation","type":"exact"},{"name":"protein complex localization","type":"related"}],"termid":"GO:0031503","terms_by_termid":{"GO:0072766":null,"GO:0098653":null,"GO:1990571":null}}


id: PBO:0049963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1A pseudogene 9","termid":"PBO:0049963"}


id: GO:0031491
data:
  {"annotated_genes":["SJAG_05192","SJAG_04879","SJAG_03945","SJAG_00913","SJAG_01146","SJAG_00914","SJAG_00925","SJAG_04670","SJAG_01653","SJAG_02311","SJAG_01823","SJAG_01046","SJAG_02401","SJAG_04036","SJAG_03128","SJAG_02416","SJAG_03905","SJAG_03694","SJAG_00266","SJAG_03982","SJAG_02348","SJAG_03997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73374,75667,76759,78900,79418,80573,81398,92105,94768,96096,98176,99101,104929,105249,109917,110019,111994,112273,115358,117470,119085,119192],"is_not":false,"summary":null,"term":"GO:0031491"}]},"cv_name":"molecular_function","definition":"Binding to a nucleosome, a complex comprised of DNA wound around a multisubunit core and associated proteins, which forms the primary packing unit of DNA into higher order structures.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin binding","termid":"GO:0003682"},{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00266":null,"SJAG_00913":null,"SJAG_00914":null,"SJAG_00925":null,"SJAG_01046":null,"SJAG_01146":null,"SJAG_01653":null,"SJAG_01823":null,"SJAG_02311":null,"SJAG_02348":null,"SJAG_02401":null,"SJAG_02416":null,"SJAG_03128":null,"SJAG_03694":null,"SJAG_03905":null,"SJAG_03945":null,"SJAG_03982":null,"SJAG_03997":null,"SJAG_04036":null,"SJAG_04670":null,"SJAG_04879":null,"SJAG_05192":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"nucleosome binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031491","terms_by_termid":{"GO:0031491":null}}


id: MONDO:0008021
data:
  {"annotated_genes":["SJAG_03131"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87798],"is_not":false,"summary":null,"term":"MONDO:0008021"}]},"cv_name":"mondo","definition":"Any Cowden disease in which the cause of the disease is a mutation in the PTEN gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Cowden disease","termid":"MONDO:0016063"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03131":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0000426"],"is_obsolete":false,"name":"Cowden syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16450","OMIM:158350"],"synonyms":[{"name":"CS","type":"related"},{"name":"CWS1","type":"related"},{"name":"Cowden disease caused by mutation in PTEN","type":"exact"},{"name":"Cowden syndrome 1","type":"exact"},{"name":"Cowden syndrome type 1","type":"exact"},{"name":"Lhermitte-Duclos disease","type":"related"},{"name":"Lhermitte-Duclos syndrome","type":"exact"},{"name":"PTEN Cowden disease","type":"exact"},{"name":"Proteus-like syndrome","type":"related"},{"name":"cerebellar granule cell Hypertrophy and megalencephaly","type":"related"},{"name":"cerebelloparenchymal disorder 6","type":"related"},{"name":"dysplastic gangliocytoma of the cerebellum","type":"related"},{"name":"multiple hamartoma syndrome","type":"related"}],"termid":"MONDO:0008021","terms_by_termid":{"MONDO:0008021":null},"xrefs":{"Monarch":{"xref_id":"0008021"}}}


id: PBO:0018182
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae HMG1","termid":"PBO:0018182"}


id: PBO:0062661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily D member 2 pseudogene","termid":"PBO:0062661"}


id: PBO:0082578
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Choline kinase; catalyzes the first step in phosphatidylcholine synthesis via the CDP-choline (Kennedy pathway); exhibits some ethanolamine kinase activity contributing to phosphatidylethanolamine synthesis via the CDP-ethanolamine pathway; CKI1 has a paralog, EKI1, that arose from the whole genome duplication","termid":"PBO:0082578"}


id: PBO:0012576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing conserved fungal protein","termid":"PBO:0012576"}


id: PBO:0089178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GID complex ubiquitin-protein ligase E3 subunit Gid2/Rmd5","termid":"PBO:0089178"}


id: PBO:0005380
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial metallopeptidase involved in genome maintenance Pgp1","termid":"PBO:0005380"}


id: GO:2001158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of L-proline catabolic process to glutamate.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of glutamate metabolic process","termid":"GO:2000213"},{"relation_name":"is_a","term_name":"positive regulation of L-proline metabolic process","termid":"GO:2000216"},{"relation_name":"is_a","term_name":"regulation of L-proline catabolic process to L-glutamate","termid":"GO:2001156"},{"relation_name":"positively_regulates","term_name":"L-proline catabolic process to L-glutamate","termid":"GO:0010133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006520"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"positive regulation of L-proline catabolic process to L-glutamate","synonyms":[{"name":"positive regulation of proline breakdown to glutamate","type":"exact"},{"name":"positive regulation of proline catabolic process to glutamate","type":"broad"},{"name":"positive regulation of proline degradation to glutamate","type":"exact"},{"name":"positive regulation of proline oxidation","type":"related"}],"termid":"GO:2001158"}


id: PR:Q10138
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- csr102 gene.","definition_xrefs":["UniProtKB:Q10138","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRAL-TRIO domain-containing protein C3H8.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H8.02","synonyms":[{"name":"Spom972h-csr102","type":"exact"}],"termid":"PR:Q10138"}


id: PBO:0075480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily B member 1, pseudogene","termid":"PBO:0075480"}


id: MONDO:0011904
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any benign familial infantile epilepsy in which the cause of the disease is a mutation in the SCN2A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign familial infantile epilepsy","termid":"MONDO:0017615"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"seizures, benign familial infantile, 3","secondary_identifiers":["GARD:16521","Orphanet:140927","MEDGEN:375105","UMLS:C1843140","DOID:0081116","OMIM:607745","MedDRA:10067866"],"synonyms":[{"name":"BFIS3","type":"related"},{"name":"BFNIS","type":"exact"},{"name":"SCN2A benign familial infantile epilepsy","type":"exact"},{"name":"benign familial infantile convulsions","type":"related"},{"name":"benign familial infantile epilepsy caused by mutation in SCN2A","type":"exact"},{"name":"benign familial neonatal-infantile seizures","type":"exact"},{"name":"benign neonatal-infantile epilepsy","type":"exact"},{"name":"convulsions benign familial neonatal","type":"related"},{"name":"convulsions, benign familial infantile, 3","type":"related"},{"name":"epilepsy, benign neonatal-infantile","type":"related"},{"name":"seizures, benign familial infantile, 3","type":"exact"},{"name":"seizures, benign familial infantile, type 3","type":"exact"},{"name":"seizures, benign familial neonatal-infantile","type":"related"}],"termid":"MONDO:0011904","xrefs":{"Monarch":{"xref_id":"0011904"}}}


id: GO:0010602
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Regulation of the chemical reactions and pathways involving 1-aminocyclopropane-1-carboxylate, the anion of 1-aminocyclopropane-1-carboxylic acid, a natural product found in plant tissues. It is a key intermediate in the biosynthesis of ethylene (ethene), a fruit-ripening hormone in plants.","definition_xrefs":["PMID:18055613"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0018871"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006520"],"is_obsolete":false,"name":"regulation of 1-aminocyclopropane-1-carboxylate metabolic process","termid":"GO:0010602"}


id: GO:0043618
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of a stimulus indicating the organism is under stress. The stress is usually, but not necessarily, exogenous (e.g. temperature, humidity, ionizing radiation).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter in response to stress (obsolete GO:0043618)","termid":"GO:0043618"}


id: PBO:0073112
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase/reductase family 42E, member 1","termid":"PBO:0073112"}


id: PBO:0075615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal peptide peptidase like 2A","termid":"PBO:0075615"}


id: GO:0010612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, extent or frequency of the process in which cardiac muscle adapts, with consequent modifications to structural and/or functional phenotypes, in response to a stimulus. Stimuli include contractile activity, loading conditions, substrate supply, and environmental factors.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle adaptation","termid":"GO:0043502"},{"relation_name":"regulates","term_name":"cardiac muscle adaptation","termid":"GO:0014887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle adaptation","termid":"GO:0010612"}


id: PBO:0047538
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibroblast growth factor 4","termid":"PBO:0047538"}


id: GO:0031285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sorocarp stalk cell differentiation. An example of this process is found in Dictyostelium discoideum.","definition_xrefs":["GOC:kp","GOC:mtg_sensu","PMID:4338436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell differentiation","termid":"GO:0045595"},{"relation_name":"regulates","term_name":"sorocarp stalk cell differentiation","termid":"GO:0031149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of sorocarp stalk cell differentiation","synonyms":[{"name":"regulation of stalk cell differentiation","type":"exact"}],"termid":"GO:0031285"}


id: PBO:0007272
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana gsh2","termid":"PBO:0007272"}


id: MONDO:0008366
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"red cell permeability defect","secondary_identifiers":["UMLS:C1867340","OMIM:179650","MEDGEN:357961"],"synonyms":[{"name":"elliptocytosis with transverse slitlike changes","type":"related"},{"name":"red cell permeability defect","type":"exact"}],"termid":"MONDO:0008366","xrefs":{"Monarch":{"xref_id":"0008366"}}}


id: GO:0010145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving fructan, a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete fructan metabolic process (obsolete GO:0010145)","synonyms":[{"name":"fructan metabolism","type":"exact"},{"name":"levan metabolic process","type":"exact"}],"termid":"GO:0010145"}


id: PBO:0056037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"latent transforming growth factor beta binding protein 2","termid":"PBO:0056037"}


id: PBO:0074426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 26","termid":"PBO:0074426"}


id: PBO:0028153
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_level_at_centromere_outer_repeat","termid":"PBO:0028153"}


id: PBO:0047281
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FA complementation group E","termid":"PBO:0047281"}


id: PBO:0043168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cartilage intermediate layer protein","termid":"PBO:0043168"}


id: GO:0034817
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: cis-9,10-dihydroanthracene-9,10-diol = 9,10-anthraquinone + 4 H+ + 4 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cis-9,10-dihydroanthracene-9,10-diol dehydrogenase activity (obsolete GO:0034817)","termid":"GO:0034817"}


id: PBO:0011502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexaprenyldihydroxybenzoate methyltransferase, Coq3 variant (predicted)","termid":"PBO:0011502"}


id: PR:O42916
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC16A3.10 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophospholipid acyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.10","synonyms":[{"name":"1-acyl-sn-glycerol-3-phosphate acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AGPAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPAAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPCAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPEAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"LPLAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SPBC16A3.10","type":"exact"},{"name":"lysophosphatidic acid acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysophosphatidylcholine acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysophosphatidylethanolamine acyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42916"}


id: MONDO:1011026
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly and cerebellar hypoplasia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly and cerebellar hypoplasia, non-human animal","termid":"MONDO:1010247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lissencephaly and cerebellar hypoplasia, sheep","secondary_identifiers":["OMIA:001867-9940"],"termid":"MONDO:1011026","xrefs":{"Monarch":{"xref_id":"1011026"}}}


id: GO:0010657
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A form of programmed cell death induced by external or internal signals that trigger the activity of proteolytic caspases, whose actions dismantle a muscle cell and result in its death. A muscle cell is a mature contractile cell, commonly known as a myocyte, that forms one of three kinds of muscle.","definition_xrefs":["CL:0000187","GOC:dph","GOC:mtg_apoptosis","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apoptotic process","termid":"GO:0006915"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle cell apoptotic process","synonyms":[{"name":"muscle cell apoptosis","type":"narrow"}],"termid":"GO:0010657"}


id: FYPO:0001056
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which L-arginine import into the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal amino acid import","termid":"FYPO:0001596"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal arginine import","synonyms":[{"name":"normal L-arginine import","type":"exact"},{"name":"normal L-arginine import across plasma membrane","type":"exact"},{"name":"normal L-arginine uptake","type":"exact"},{"name":"normal arginine import during mitotic cell cycle","type":"related"},{"name":"normal arginine import during vegetative growth","type":"exact"},{"name":"normal arginine import into cell","type":"exact"}],"termid":"FYPO:0001056"}


id: MONDO:0007427
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness with anhidrotic ectodermal dysplasia","secondary_identifiers":["UMLS:C1852279","MESH:C565119","MEDGEN:342202","OMIM:125050"],"synonyms":[{"name":"deafness with anhidrotic ectodermal dysplasia","type":"exact"}],"termid":"MONDO:0007427","xrefs":{"Monarch":{"xref_id":"0007427"}}}


id: PR:Q10429
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A condensin complex subunit 3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR14418:SF5","OMA:SCHPO04699"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"condensin complex subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.03","secondary_identifiers":["UniProtKB:Q10429"],"synonyms":[{"name":"CAPG homolog (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NCAPG","type":"exact"},{"name":"p100 (Schizosaccharomyces pombe 972h-)","type":"broad"}],"termid":"PR:Q10429"}


id: PBO:0112882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial 2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex), Kgd1","termid":"PBO:0112882"}


id: GO:0098565
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The side (leaflet) of the endosome membrane that faces the lumen.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lumenal side of membrane","termid":"GO:0098576"},{"relation_name":"part_of","term_name":"endosome membrane","termid":"GO:0010008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005768"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0031410","GO:0005768","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"lumenal side of endosome membrane","synonyms":[{"name":"internal leaflet of endosome membrane","type":"exact"},{"name":"internal side of endosome membrane","type":"exact"}],"termid":"GO:0098565"}


id: GO:0099646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Vesicle-mediated transport of a neurotransmitter receptor vesicle from the plasma membrane to the endosome.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to endosome","termid":"GO:0036010"},{"relation_name":"is_a","term_name":"plasma membrane to endosome transport","termid":"GO:0048227"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"},{"relation_name":"is_a","term_name":"neurotransmitter receptor transport","termid":"GO:0099637"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0016192","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"neurotransmitter receptor transport, plasma membrane to endosome","termid":"GO:0099646"}


id: PBO:0001741
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target of leptomycin B","termid":"PBO:0001741"}


id: GO:0005758
data:
  {"annotated_genes":["SJAG_00230","SJAG_00449","SJAG_01996","SJAG_04533","SJAG_02229","SJAG_02917","SJAG_00455","SJAG_00564","SJAG_02744","SJAG_02524","SJAG_04208","SJAG_00687","SJAG_01647","SJAG_00480","SJAG_02038","SJAG_04008","SJAG_01560","SJAG_00196","SJAG_03199","SJAG_01949","SJAG_00668","SJAG_00576","SJAG_02592","SJAG_04116","SJAG_02656","SJAG_06440","SJAG_05398","SJAG_05261","SJAG_02887","SJAG_01140","SJAG_02360"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[60066,61925,62357,62857,63795,66651,68575,71147,72027,78395,78675,79022,79901,80256,80647,90330,96372,96450,96981,99141,102093,102179,104228,108894,109203,109514,119119],"is_not":false,"summary":null,"term":"GO:0005758"},{"annotations":[58725,90663,118326,94795],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"The region between the inner and outer lipid bilayers of the mitochondrial envelope.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope lumen","termid":"GO:0031970"},{"relation_name":"part_of","term_name":"mitochondrial envelope","termid":"GO:0005740"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00196":null,"SJAG_00230":null,"SJAG_00449":null,"SJAG_00455":null,"SJAG_00480":null,"SJAG_00564":null,"SJAG_00576":null,"SJAG_00668":null,"SJAG_00687":null,"SJAG_01140":null,"SJAG_01560":null,"SJAG_01647":null,"SJAG_01949":null,"SJAG_01996":null,"SJAG_02038":null,"SJAG_02229":null,"SJAG_02360":null,"SJAG_02524":null,"SJAG_02592":null,"SJAG_02656":null,"SJAG_02744":null,"SJAG_02887":null,"SJAG_02917":null,"SJAG_03199":null,"SJAG_04008":null,"SJAG_04116":null,"SJAG_04208":null,"SJAG_04533":null,"SJAG_05261":null,"SJAG_05398":null,"SJAG_06440":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005739"}],"interesting_parent_ids":["GO:0005737","GO:0005739","GO:0005575"],"is_obsolete":false,"name":"mitochondrial intermembrane space","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000104":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["NIF_Subcellular:sao118944228","GO:0031971"],"synonyms":[{"name":"mitochondrial envelope lumen","type":"exact"},{"name":"mitochondrial membrane lumen","type":"related"}],"termid":"GO:0005758","terms_by_termid":{"GO:0005758":null,"GO:0042719":null}}


id: PBO:0072490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein SA pseudogene 19","termid":"PBO:0072490"}


id: MONDO:1010584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"},{"relation_name":"is_a","term_name":"congenital hypothyroidism, dog","termid":"MONDO:1010602"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, dog","secondary_identifiers":["OMIA:000424-9615"],"termid":"MONDO:1010584","xrefs":{"Monarch":{"xref_id":"1010584"}}}


id: PBO:0001298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase","termid":"PBO:0001298"}


id: PBO:0045554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity phosphatase 6","termid":"PBO:0045554"}


id: PBO:0000475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family M17","termid":"PBO:0000475"}


id: RO:0009003
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"\\\"immersed in\\\" is a relation between a (physical) entity and a fluid substance in which the entity is wholely or substantially surrounded by the substance.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immersed_in","termid":"RO:0009003"}


id: GO:0008345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Locomotory behavior in a larval (immature) organism.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"locomotory behavior","termid":"GO:0007626"},{"relation_name":"is_a","term_name":"larval behavior","termid":"GO:0030537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval locomotory behavior","synonyms":[{"name":"larval locomotory behaviour","type":"exact"}],"termid":"GO:0008345"}


id: FYPO:0007776
data:
  {"alleles_by_uniquename":{"SJAG_00124:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00124","name":"SJAG_00124delta","uniquename":"SJAG_00124:allele-1"},"SJAG_00610:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00610","name":"pck2delta","uniquename":"SJAG_00610:allele-1"},"SJAG_02013:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02013","name":"pyp1delta","uniquename":"SJAG_02013:allele-1"},"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"},"SJAG_04551:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04551","name":"pmk1delta","uniquename":"SJAG_04551:allele-1"},"SJAG_04551:allele-2":{"allele_type":"amino_acid_insertion","description":"82-NITCIYDLDIIINPYNFNEVYIYEE-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sj(ins82-105)","uniquename":"SJAG_04551:allele-2"},"SJAG_04551:allele-3":{"allele_type":"other","description":"Pmk1 from S. pombe","gene_uniquename":"SJAG_04551","name":"Pmk1Sp","uniquename":"SJAG_04551:allele-3"},"SJAG_04551:allele-4":{"allele_type":"partial_amino_acid_deletion","description":"Pmk1 from S. pombe with deleted residues 82-105","gene_uniquename":"SJAG_04551","name":"Pmk1Sp(delta82-105)","uniquename":"SJAG_04551:allele-4"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121274,121286,121290,121295,121298,121394,121541,121616,121619],"is_not":false,"summary":null,"term":"FYPO:0007776"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype in which hyphae are shorter than normal.","definition_xrefs":["PomBase:mah","PMID:31150379"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal hyphal growth","termid":"FYPO:0007773"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00610":null,"SJAG_02013":null,"SJAG_02527":null,"SJAG_04551":null,"SJAG_04697":null},"genotype_count":9,"genotypes_by_uniquename":{"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sj(ins82-105)(82-NITCIYDLDIIINPYNFNEVYIYEE-105)","display_uniquename":"Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-2","expression":"Not assayed or wild type"}]}]},"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(delta82-105)(Pmk1 from S. pombe with deleted residues 82-105 Δaa)","display_uniquename":"Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-4","expression":"Not assayed or wild type"}]}]},"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type":{"display_name":"Pmk1Sp(Pmk1 from S. pombe)","display_uniquename":"Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-3","expression":"Not assayed or wild type"}]}]},"SJAG_00124delta":{"display_name":"SJAG_00124delta","display_uniquename":"SJAG_00124delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00124:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]},"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]},"pck2delta":{"display_name":"pck2delta","display_uniquename":"pck2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00610:allele-1","expression":"Null"}]}]},"pmk1delta":{"display_name":"pmk1delta","display_uniquename":"pmk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04551:allele-1","expression":"Null"}]}]},"pyp1delta":{"display_name":"pyp1delta","display_uniquename":"pyp1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02013:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007773"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0007773"],"is_obsolete":false,"name":"decreased hyphal length","references_by_uniquename":{"PMID:31150379":null,"PMID:34198697":null,"PMID:36058798":null,"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_04551","SJAG_00610","SJAG_02013","SJAG_04697","SJAG_00124","SJAG_02527"],"single_locus_genotype_uniquenames":["pyp1delta","lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","gms1delta","pck2delta","pmk1delta","Pmk1Sp(delta82-105)-Pmk1_from_S._pombe_with_deleted_residues_82-105-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","Pmk1Sp-Pmk1_from_S._pombe-other-expression-not_assayed_or_wild_type","SJAG_00124delta","Pmk1Sj(ins82-105)-82-NITCIYDLDIIINPYNFNEVYIYEE-105-amino_acid_insertion-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"short hyphae","type":"exact"}],"termid":"FYPO:0007776","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0007776":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MOD:01274
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by formation of an adduct with 4-(2-aminoethyl)benzenesulfonyl fluoride, AEBS, and an L-histidine residue.","definition_xrefs":["PubMed:8597590","Unimod:276#H"],"direct_ancestors":[{"relation_name":"is_a","term_name":"4-(2-aminoethyl)benzenesulfonyl fluoride derivatized residue","termid":"MOD:00596"},{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N'-[4-(2-aminoethyl)benzenesulfonyl] derivatized histidine","synonyms":[{"name":"AEBS","type":"related"},{"name":"Aminoethylbenzenesulfonylation","type":"related"}],"termid":"MOD:01274"}


id: PBO:0043463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 4","termid":"PBO:0043463"}


id: GO:0061679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The Entner-Doudoroff pathway that proceeds through a D-gluconate intermediate.","definition_xrefs":["GOC:dph","PMID:12921536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Entner-Doudoroff pathway","termid":"GO:0061678"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0005975"],"is_obsolete":false,"name":"Entner-Doudoroff pathway through gluconate","synonyms":[{"name":"gluconate pathway","type":"related"}],"termid":"GO:0061679"}


id: PBO:0071220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 61","termid":"PBO:0071220"}


id: GO:0035406
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by addition of a phosphate group to a tyrosine residue.","definition_xrefs":["GOC:bf"],"gene_count":0,"genotype_count":0,"name":"obsolete histone-tyrosine phosphorylation (obsolete GO:0035406)","synonyms":[{"name":"histone tyrosine phosphorylation","type":"exact"}],"termid":"GO:0035406"}


id: GO:0005919
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A septate junction in which regular arrays of electron-dense septae span the intermembrane space.","definition_xrefs":["PMID:11700298"],"direct_ancestors":[{"relation_name":"is_a","term_name":"septate junction","termid":"GO:0005918"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pleated septate junction","synonyms":[{"name":"pleated desmosome","type":"related"}],"termid":"GO:0005919"}


id: PBO:0071911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 50","termid":"PBO:0071911"}


id: GO:0016855
data:
  {"annotated_genes":["SJAG_00036","SJAG_04298"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63204,67194],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047661"}]},"cv_name":"molecular_function","definition":"Catalysis of a reaction that alters the configuration of one or more chiral centers in an amino acid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity","termid":"GO:0016854"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00036":null,"SJAG_04298":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"racemase and epimerase activity, acting on amino acids and derivatives","references_by_uniquename":{"GO_REF:0000002":null},"secondary_identifiers":["EC:5.1.1.-"],"termid":"GO:0016855","terms_by_termid":{"GO:0047661":null}}


id: MONDO:0010903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"craniosynostosis, Adelaide type","secondary_identifiers":["MESH:C563471","OMIM:600593","MEDGEN:371600","UMLS:C1833578"],"synonyms":[{"name":"CRSA","type":"related"},{"name":"craniosynostosis, Adelaide type","type":"exact"}],"termid":"MONDO:0010903","xrefs":{"Monarch":{"xref_id":"0010903"}}}


id: PBO:0031527
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_DNA-1,N6-ethenoadenine_N-glycosylase_activity","termid":"PBO:0031527"}


id: PBO:0091950
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase jmj4","termid":"PBO:0091950"}


id: MONDO:0001898
data:
  {"annotated_genes":["SJAG_02063","SJAG_00495"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88920],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010557"},{"annotations":[89067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009796"}]},"cv_name":"mondo","definition":"A disease involving the optic choroid.","direct_ancestors":[{"relation_name":"is_a","term_name":"uveal disorder","termid":"MONDO:0002661"},{"relation_name":"is_a","term_name":"ocular vascular disorder","termid":"MONDO:0005552"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00495":null,"SJAG_02063":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"optic choroid disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:D015862","ICD9:363.9","NCIT:C34468","DOID:1417","SCTID:128468007","UMLS:C4025836","ICD9:363.8","MEDGEN:892839"],"synonyms":[{"name":"choroid disease","type":"related"},{"name":"choroid disorder","type":"exact"},{"name":"disease of optic choroid","type":"exact"},{"name":"disease or disorder of optic choroid","type":"exact"},{"name":"disorder of optic choroid","type":"exact"},{"name":"optic choroid disease","type":"exact"},{"name":"optic choroid disease or disorder","type":"exact"}],"termid":"MONDO:0001898","terms_by_termid":{"MONDO:0009796":null,"MONDO:0010557":null},"xrefs":{"Monarch":{"xref_id":"0001898"}}}


id: PBO:0067337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 430, pseudogene","termid":"PBO:0067337"}


id: PATO:0001183
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001183 absolute response value (obsolete PATO:0001183)","termid":"PATO:0001183"}


id: PBO:0005513
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.6.1.5","termid":"PBO:0005513"}


id: MONDO:0015650
data:
  {"annotated_genes":["SJAG_02848","SJAG_02765","SJAG_02084","SJAG_04157","SJAG_03042","SJAG_00824","SJAG_02384","SJAG_03657","SJAG_00760","SJAG_01851","SJAG_02180","SJAG_04351","SJAG_01184","SJAG_01653","SJAG_00321","SJAG_04038","SJAG_01059","SJAG_01797","SJAG_04513"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87927,87928],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014150"},{"annotations":[89034],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013389"},{"annotations":[88371],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014392"},{"annotations":[87235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014593"},{"annotations":[87180],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012245"},{"annotations":[87245,87246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014598"},{"annotations":[87208,87209,87207],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014625"},{"annotations":[88113],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014895"},{"annotations":[89161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014933"},{"annotations":[89212],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013322"},{"annotations":[88377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054846"},{"annotations":[87348],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024556"},{"annotations":[89145],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014924"},{"annotations":[89144],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014925"},{"annotations":[88011],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013526"}]},"cv_name":"mondo","definition":"A syndrome that has a characteristic cluster of clinical features and/or lectroencephalographic (EEG) findings that reflect underlying epileptic activity. It is often associated with a range of other health issues, including cognitive impairment, intellectual disability, physical gross motor and fine motor delays, speech and language deficits, and impacts to other bodily functions and may be supported by specific etiological findings—such as structural, genetic, metabolic, immune, or infectious causes or have an unknown etiology.","definition_xrefs":["PMID:28276062","doi:10.5281/zenodo.14894999"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00321":null,"SJAG_00760":null,"SJAG_00824":null,"SJAG_01059":null,"SJAG_01184":null,"SJAG_01653":null,"SJAG_01797":null,"SJAG_01851":null,"SJAG_02084":null,"SJAG_02180":null,"SJAG_02384":null,"SJAG_02765":null,"SJAG_02848":null,"SJAG_03042":null,"SJAG_03657":null,"SJAG_04038":null,"SJAG_04157":null,"SJAG_04351":null,"SJAG_04513":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4505072","Orphanet:166463","GARD:20083","MEDGEN:1371141"],"synonyms":[{"name":"epileptic syndrome","type":"exact"},{"name":"syndromic epilepsy","type":"exact"}],"termid":"MONDO:0015650","terms_by_termid":{"MONDO:0012245":null,"MONDO:0013322":null,"MONDO:0013389":null,"MONDO:0013526":null,"MONDO:0014150":null,"MONDO:0014392":null,"MONDO:0014593":null,"MONDO:0014598":null,"MONDO:0014625":null,"MONDO:0014895":null,"MONDO:0014924":null,"MONDO:0014925":null,"MONDO:0014933":null,"MONDO:0024556":null,"MONDO:0054846":null},"xrefs":{"Monarch":{"xref_id":"0015650"}}}


id: GO:0072220
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the metanephric descending thin limb over time, from its formation to the mature structure. The metanephric descending thin limb is a part of the metanephric loop of Henle situated just after the proximal straight tubule (S3). It extends to the tip of the metanephric loop of Henle.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"descending thin limb development","termid":"GO:0072022"},{"relation_name":"part_of","term_name":"metanephric loop of Henle development","termid":"GO:0072236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric descending thin limb development","termid":"GO:0072220"}


id: GO:1990157
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex consisting of the helicase loading complex DnaB-DnaC bound to the DNA-bound DNA replication initiation protein DnaA. Essential for DNA replication initiation.","definition_xrefs":["GOC:bhm","PMID:20129058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pre-primosome complex","termid":"GO:1990099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005694","GO:0005575"],"is_obsolete":false,"name":"DnaA-DnaB-DnaC complex","termid":"GO:1990157"}


id: GO:1901852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of 7,8-didemethyl-8-hydroxy-5-deazariboflavin.","definition_xrefs":["GOC:TermGenie","GOC:yaf","PMID:14593448","UniPathway:UPA00072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin metabolic process","termid":"GO:1901850"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin biosynthetic process","synonyms":[{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin anabolism","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin biosynthesis","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin formation","type":"exact"},{"name":"7,8-didemethyl-8-hydroxy-5-deazariboflavin synthesis","type":"exact"},{"name":"coenzyme F0 anabolism","type":"exact"},{"name":"coenzyme F0 biosynthesis","type":"exact"},{"name":"coenzyme F0 biosynthetic process","type":"exact"},{"name":"coenzyme F0 formation","type":"exact"},{"name":"coenzyme F0 synthesis","type":"exact"}],"termid":"GO:1901852"}


id: GO:1902823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of late endosome to lysosome transport.","definition_xrefs":["PMID:23949442","GOC:pad","GOC:PARL","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of late endosome to lysosome transport","termid":"GO:1902822"},{"relation_name":"is_a","term_name":"negative regulation of vacuolar transport","termid":"GO:1903336"},{"relation_name":"negatively_regulates","term_name":"late endosome to lysosome transport","termid":"GO:1902774"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"negative regulation of late endosome to lysosome transport","synonyms":[{"name":"down regulation of late endosome to lysosome transport","type":"exact"},{"name":"down-regulation of late endosome to lysosome transport","type":"exact"},{"name":"downregulation of late endosome to lysosome transport","type":"exact"},{"name":"inhibition of late endosome to lysosome transport","type":"narrow"}],"termid":"GO:1902823"}


id: PBO:0044793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 6","termid":"PBO:0044793"}


id: PBO:0077476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 198B (pseudogene)","termid":"PBO:0077476"}


id: GO:0044318
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-aspartate + fumarate = alpha-iminosuccinate + succinate.","definition_xrefs":["PMID:20149100"],"gene_count":0,"genotype_count":0,"name":"obsolete L-aspartate:fumarate oxidoreductase activity (obsolete GO:0044318)","termid":"GO:0044318"}


id: PBO:0036357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor 3, Coa3 (predicted)","termid":"PBO:0036357"}


id: GO:0080027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus from a herbivore.","definition_xrefs":["PMID:18987211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to other organism","termid":"GO:0051707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to herbivore","termid":"GO:0080027"}


id: MONDO:0859572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac valvular defect","termid":"MONDO:0031323"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cardiac valvular dysplasia 2","secondary_identifiers":["MEDGEN:1823999","UMLS:C5774226","OMIM:620067"],"termid":"MONDO:0859572","xrefs":{"Monarch":{"xref_id":"0859572"}}}


id: PBO:0044750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 31","termid":"PBO:0044750"}


id: PBO:0073618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 1","termid":"PBO:0073618"}


id: MONDO:0010675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"muscular dystrophy, cardiac type","secondary_identifiers":["OMIM:309930","MESH:C563247","MEDGEN:254845","UMLS:C1442927"],"synonyms":[{"name":"muscular dystrophy, cardiac type","type":"exact"}],"termid":"MONDO:0010675","xrefs":{"Monarch":{"xref_id":"0010675"}}}


id: GO:0034918
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 3-hydroxy-2-methylhexanoyl-CoA = 2-methyl-3-oxohexanoyl-CoA + 2 H+ + 2 e-.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxy-2-methylhexanoyl-CoA dehydrogenase activity (obsolete GO:0034918)","termid":"GO:0034918"}


id: PBO:0084744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial isoleucyl-tRNA synthetase; null mutant is deficient in respiratory growth; human homolog IARS2 implicated in mitochondrial diseases, can partially complement yeast null mutant","termid":"PBO:0084744"}


id: GO:1901612
data:
  {"annotated_genes":["SJAG_03563","SJAG_00368"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[108237,108625],"is_not":false,"summary":null,"term":"GO:1901612"}]},"cv_name":"molecular_function","definition":"Binding to cardiolipin.","definition_xrefs":["GOC:kmv","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylglycerol binding","termid":"GO:1901611"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00368":null,"SJAG_03563":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"cardiolipin binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1901612","terms_by_termid":{"GO:1901612":null}}


