# terms

id: PBO:0077471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 191B","termid":"PBO:0077471"}


id: GO:0009033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: NADH + H+ + trimethylamine-N-oxide = NAD+ + trimethylamine + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete trimethylamine-N-oxide reductase activity (obsolete GO:0009033)","synonyms":[{"name":"NADH:trimethylamine-N-oxide oxidoreductase","type":"exact"},{"name":"trimethylamine N-oxide reductase","type":"exact"},{"name":"trimethylamine oxidase activity","type":"exact"},{"name":"trimethylamine oxide reductase","type":"exact"}],"termid":"GO:0009033"}


id: PBO:0046365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleoside triphosphate diphosphohydrolase 2","termid":"PBO:0046365"}


id: PBO:0082494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of 1,3-beta-D-glucan synthase; functionally redundant with alternate catalytic subunit Gsc2p; binds to regulatory subunit Rho1p; involved in cell wall synthesis and maintenance; localizes to sites of cell wall remodeling; FKS1 has a paralog, GSC2, that arose from the whole genome duplication","termid":"PBO:0082494"}


id: PR:Q10325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mst2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone acetyltransferase mst2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17G8.13c","synonyms":[{"name":"Spom972h-mst2","type":"exact"}],"termid":"PR:Q10325"}


id: GO:0050611
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + arsenite + 2 oxidized azurin = 2 H+ + 2 reduced azurin + arsenate.","definition_xrefs":["EC:1.20.9.1","MetaCyc:1.20.98.1-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on phosphorus or arsenic in donors, with a copper protein as acceptor","termid":"GO:0052882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"arsenate reductase (azurin) activity","secondary_identifiers":["GO:0018691","RHEA:18701","UM-BBD_reactionID:r0634"],"synonyms":[{"name":"arsenite oxidase activity","type":"related"},{"name":"arsenite:azurin oxidoreductase activity","type":"related"}],"termid":"GO:0050611"}


id: PBO:0058922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA let-7b","termid":"PBO:0058922"}


id: PBO:0069948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1241, pseudogene","termid":"PBO:0069948"}


id: PATO:0002475
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A position quality inhering in a bearer by virtue of the bearer's existing near the end of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"subterminal","termid":"PATO:0002475"}


id: PBO:0042404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division cycle 14C","termid":"PBO:0042404"}


id: GO:0140325
data:
  {"annotated_genes":["SJAG_04597"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96419],"is_not":false,"summary":null,"term":"GO:0140325"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to the medial cortex.","definition_xrefs":["PMID:30853434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to medial cortex","termid":"GO:0106011"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to plasma membrane","termid":"GO:1903077"},{"relation_name":"is_a","term_name":"negative regulation of protein localization to cell cortex","termid":"GO:1904777"},{"relation_name":"negatively_regulates","term_name":"protein localization to medial cortex","termid":"GO:0071574"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to medial cortex","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0140325","terms_by_termid":{"GO:0140325":null}}


id: MONDO:0013878
data:
  {"annotated_genes":["SJAG_05979"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88143],"is_not":false,"summary":null,"term":"MONDO:0013878"}]},"cv_name":"mondo","definition":"Any pulmonary fibrosis and/or bone marrow failure, Telomere-related in which the cause of the disease is a mutation in the TERT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete idiopathic pulmonary fibrosis (obsolete MONDO:0008345)","termid":"MONDO:0008345"},{"relation_name":"is_a","term_name":"pulmonary fibrosis and/or bone marrow failure, telomere-related","termid":"MONDO:0000148"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["EFO:1001501","MEDGEN:766531","OMIM:614742","UMLS:C3553617"],"synonyms":[{"name":"PFBMFT1","type":"related"},{"name":"TERT pulmonary fibrosis and/or bone marrow failure, Telomere-related","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, TELOMERE-RELATED, 1","type":"related"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related caused by mutation in TERT","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, 1","type":"exact"},{"name":"pulmonary fibrosis and/or bone marrow failure, Telomere-related, type 1","type":"exact"}],"termid":"MONDO:0013878","terms_by_termid":{"MONDO:0013878":null},"xrefs":{"Monarch":{"xref_id":"0013878"}}}


id: PBO:0005479
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"localization could be overexpression artifact","termid":"PBO:0005479"}


id: PBO:0051786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing F4, pseudogene","termid":"PBO:0051786"}


id: PBO:0041547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 18 open reading frame 21","termid":"PBO:0041547"}


id: GO:0034339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a ligand-bound hormone receptor acts in the nucleus to modulate the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GO_REF:0000021","GOC:mah","GOC:mh"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor (obsolete GO:0034339)","synonyms":[{"name":"regulation of transcription from RNA polymerase II promoter by nuclear hormone receptor","type":"exact"}],"termid":"GO:0034339"}


id: MONDO:0850514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"inclusion body myopathy with Paget disease of bone and frontotemporal dementia","termid":"MONDO:0000507"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005559","MONDO:0002039","MONDO:0005336"],"is_obsolete":false,"name":"inclusion body myopathy and brain white matter abnormalities","secondary_identifiers":["DOID:0081121","MEDGEN:1812978","UMLS:C5676909","OMIM:619733"],"termid":"MONDO:0850514","xrefs":{"Monarch":{"xref_id":"0850514"}}}


id: GO:0030893
data:
  {"annotated_genes":["SJAG_05019","SJAG_01831","SJAG_03698","SJAG_03926"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[89815,109768,109851,119125],"is_not":false,"summary":null,"term":"GO:0030893"}]},"cv_name":"cellular_component","definition":"A cohesin complex that mediates sister chromatid cohesion during meiosis; has a subunit composition distinct from that of the mitotic cohesin complex.","definition_xrefs":["PMID:12750522","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cohesin complex","termid":"GO:0008278"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01831":null,"SJAG_03698":null,"SJAG_03926":null,"SJAG_05019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694","GO:0032991"],"is_obsolete":false,"name":"meiotic cohesin complex","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0034991"],"synonyms":[{"name":"nuclear meiotic cohesin complex","type":"related"}],"termid":"GO:0030893","terms_by_termid":{"GO:0030893":null}}


id: PR:O14236
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nucleolar GTP-binding protein 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleolar GTP-binding protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.03c","secondary_identifiers":["UniProtKB:O14236"],"synonyms":[{"name":"SPAC6F6.03c","type":"related"},{"name":"Spom972h-GNL2","type":"exact"}],"termid":"PR:O14236"}


id: FYPO:0004422
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the phosphorylation of one or more specific proteins is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein modification","termid":"FYPO:0002495"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal protein phosphorylation","termid":"FYPO:0004422"}


id: PBO:0067076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 107, pseudogene","termid":"PBO:0067076"}


id: PR:P41891
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gar2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P41891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein gar2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC140.02","synonyms":[{"name":"Spom972h-gar2","type":"exact"}],"termid":"PR:P41891"}


id: PBO:0048794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit alpha o1","termid":"PBO:0048794"}


id: PBO:0048309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 20","termid":"PBO:0048309"}


id: GO:0052460
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an organism modulates the frequency, rate or extent of the release of nutrients from a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of process of another organism","termid":"GO:0035821"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of nutrient release by symbiont","synonyms":[{"name":"modulation by host of nutrient release from symbiont","type":"exact"}],"termid":"GO:0052460"}


id: FYPO:0006566
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a normal proportion of cells in the population remains viable under conditions of sulfur starvation.","definition_xrefs":["PMID:9372444","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal phenotype","termid":"FYPO:0000257"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000257","FYPO:0000003"],"is_obsolete":false,"name":"normal viability upon sulfur starvation","synonyms":[{"name":"normal cell population viability upon sulfur starvation","type":"exact"},{"name":"normal viability upon sulphur starvation","type":"exact"}],"termid":"FYPO:0006566"}


id: GO:0035364
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GO:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleobase transport","termid":"GO:0015855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"thymine transport","synonyms":[{"name":"5-methyluracil transport","type":"exact"},{"name":"thymine transmembrane transport","type":"exact"}],"termid":"GO:0035364"}


id: PATO:0002107
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's being at the edge or boundary of a related entity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral","termid":"PATO:0002107"}


id: PBO:0058071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4290","termid":"PBO:0058071"}


id: MONDO:0010598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any glycogen storage disease in which the cause of the disease is a mutation in the PHKA2 gene, with no PHK activity in liver or erythrocytes.","definition_xrefs":["MONDO:design_pattern"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycogen storage disease due to liver phosphorylase kinase deficiency","termid":"MONDO:0020693"},{"relation_name":"is_a","term_name":"glycogen storage disease IX","termid":"MONDO:0700291"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335","MONDO:0005066","MONDO:0037792"],"is_obsolete":false,"name":"glycogen storage disease IXa1","secondary_identifiers":["DOID:2751","NANDO:1200847","GARD:18386","MESH:C564421","MESH:D006015","MedDRA:10053242","NANDO:2201164","DOID:0111042","SCTID:235908005","SCTID:41527003","UMLS:C3694531","MEDGEN:854172","OMIM:306000"],"synonyms":[{"name":"GSD VIII","type":"related"},{"name":"GSD VIII, formerly","type":"related"},{"name":"GSD type 9A","type":"exact"},{"name":"GSD type IXa","type":"exact"},{"name":"GSD9A","type":"exact"},{"name":"GSD9A1","type":"related"},{"name":"PHKA2 glycogen storage disease","type":"exact"},{"name":"PHKA2-related glycogen storage disease type IX","type":"exact"},{"name":"PYKL","type":"related"},{"name":"glycogen storage disease 8","type":"related"},{"name":"glycogen storage disease IXa","type":"broad"},{"name":"glycogen storage disease IXa1","type":"exact"},{"name":"glycogen storage disease VIII","type":"exact"},{"name":"glycogen storage disease VIII, formerly","type":"related"},{"name":"glycogen storage disease caused by mutation in PHKA2","type":"exact"},{"name":"glycogen storage disease type 9A","type":"exact"},{"name":"glycogen storage disease type IXa","type":"exact"},{"name":"glycogen storage disease type VIII","type":"exact"},{"name":"glycogen storage disease, type IXa1, X-linked recessive","type":"exact"},{"name":"glycogen storage disease, type IXa2, X-linked recessive","type":"exact"},{"name":"glycogenosis type 8","type":"related"},{"name":"glycogenosis type 9A","type":"exact"},{"name":"glycogenosis type IXa","type":"exact"},{"name":"glycogenosis type VIII","type":"exact"},{"name":"hepatic glycogen phosphorylase kinase deficiency","type":"exact"},{"name":"hepatic phosphorylase kinase deficiency","type":"related"},{"name":"liver glycogenosis, X-linked, type 1","type":"related"},{"name":"phosphorylase kinase deficiency of liver","type":"related"}],"termid":"MONDO:0010598","xrefs":{"Monarch":{"xref_id":"0010598"}}}


id: MONDO:0000093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Schistosoma mansoni infection, susceptibility (obsolete MONDO:0000093)","termid":"MONDO:0000093","xrefs":{"Monarch":{"xref_id":"0000093"}}}


id: PBO:0074116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 30 member 2","termid":"PBO:0074116"}


id: GO:0007526
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the larval somatic muscle over time, from its formation to the mature structure.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatic muscle development","termid":"GO:0007525"},{"relation_name":"part_of","term_name":"larval development","termid":"GO:0002164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval somatic muscle development","termid":"GO:0007526"}


id: GO:0015575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of mannitol from one side of a membrane to the other. Mannitol is the alditol derived from D-mannose by reduction of the aldehyde group.","definition_xrefs":["ISBN:0815340729","GOC:mtg_transport","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"polyol transmembrane transporter activity","termid":"GO:0015166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"mannitol transmembrane transporter activity","secondary_identifiers":["GO:0015586"],"synonyms":[{"name":"mannitol permease activity","type":"exact"}],"termid":"GO:0015575"}


id: GO:0160059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell death resulting from activation of endogenous cellular processes and occurring as a result of a retinoic acid.","definition_xrefs":["PMID:9187263","PMID:17869331"],"direct_ancestors":[{"relation_name":"is_a","term_name":"programmed cell death","termid":"GO:0012501"},{"relation_name":"part_of","term_name":"cellular response to retinoic acid","termid":"GO:0071300"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"programmed cell death in response to retinoic acid","synonyms":[{"name":"retinoic acid-induced apoptosis","type":"exact"}],"termid":"GO:0160059"}


id: PBO:0050938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon alpha 8","termid":"PBO:0050938"}


id: GO:0002023
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An eating behavior process whereby detection of a dietary excess results in a decrease in intake of nutrients.","definition_xrefs":["GOC:pr","PMID:12840200","GOC:pg","PMID:12161655"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eating behavior","termid":"GO:0042755"},{"relation_name":"part_of","term_name":"response to dietary excess","termid":"GO:0002021"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reduction of food intake in response to dietary excess","termid":"GO:0002023"}


id: PBO:0039681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amyloid beta precursor protein binding family A member 2","termid":"PBO:0039681"}


id: PATO:0001925
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A surface shape quality inhering in a bearer by virtue of the bearer's shape of features present on its surface or outer shell.","definition_xrefs":["PATOC:CJM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surface feature shape","termid":"PATO:0001925"}


id: GO:1901113
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving erythromycin.","definition_xrefs":["UniPathway:UPA00240","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macrolide metabolic process","termid":"GO:0033067"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"erythromycin metabolic process","synonyms":[{"name":"erythromycin metabolism","type":"exact"}],"termid":"GO:1901113"}


id: PBO:0113008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aspartate kinase (L-aspartate 4-P-transferase); cytoplasmic enzyme that catalyzes the first step in the common pathway for methionine and threonine biosynthesis; subject to allosteric feedback inhibition by threonine; expression regulated by Gcn4p and the general control of amino acid synthesis","termid":"PBO:0113008"}


id: PBO:0027855
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_vacuolar_membrane","termid":"PBO:0027855"}


id: GO:0140105
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by interleukin-10 binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:11244051"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"interleukin-10-mediated signaling pathway","synonyms":[{"name":"IL-10-mediated signaling pathway","type":"exact"},{"name":"interleukin-10-mediated signalling pathway","type":"exact"}],"termid":"GO:0140105"}


id: FYPO:0002587
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any mitochondrially-encoded polycistronic RNA precursors measured in the cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased level of mitochondrial polycistronic RNA precursors","synonyms":[{"name":"increased accumulation of mitochondrial polycistronic RNA precursors","type":"related"},{"name":"increased level of mitochondrial polycistronic RNA precursors during mitotic cell cycle","type":"related"},{"name":"increased level of mitochondrial polycistronic RNA precursors during vegetative growth","type":"exact"}],"termid":"FYPO:0002587"}


id: MONDO:0100033
data:
  {"annotated_genes":["SJAG_01881","SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"},{"annotations":[87475],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012407"}]},"cv_name":"mondo","definition":"Metabolic epilepsies are conceptualized as having a distinct metabolic abnormality that has been demonstrated to be associated with a substantially increased risk of developing epilepsy in appropriately designed studies. Metabolic disorders have genetic origin; however, the metabolic abnormalities are a separate disorder interposed between the genetic defect and the epilepsy.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01881":null,"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"metabolic epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4524099","MEDGEN:1843497"],"termid":"MONDO:0100033","terms_by_termid":{"MONDO:0012407":null,"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0100033"}}}


id: PBO:0059616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ATP6 pseudogene 28","termid":"PBO:0059616"}


id: PBO:0042940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromatin assembly factor 1 subunit A","termid":"PBO:0042940"}


id: PBO:0116778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2I antisense RNA 1","termid":"PBO:0116778"}


id: GO:0002230
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any host process that results in the promotion of antiviral immune response mechanisms, thereby limiting viral replication.","definition_xrefs":["GOC:add","GOC:dph","ISBN:0781735149","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response to virus by host","termid":"GO:0050691"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of defense response to virus by host","synonyms":[{"name":"activation of antiviral response by host","type":"narrow"},{"name":"positive regulation of antiviral response by host","type":"exact"},{"name":"stimulation of antiviral response by host","type":"narrow"},{"name":"up regulation of antiviral response by host","type":"exact"},{"name":"up-regulation of antiviral response by host","type":"exact"},{"name":"upregulation of antiviral response by host","type":"exact"}],"termid":"GO:0002230"}


id: GO:0043505
data:
  {"annotated_genes":["SJAG_00307"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104078],"is_not":false,"summary":null,"term":"GO:0043505"}]},"cv_name":"cellular_component","definition":"A form of nucleosome located only at the centromere, in which the histone H3 is replaced by the variant form CENP-A (sometimes known as CenH3).","definition_xrefs":["PMID:16183641","GOC:go_curators","PMID:15175412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleosome","termid":"GO:0000786"},{"relation_name":"part_of","term_name":"CENP-A containing chromatin","termid":"GO:0061638"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00307":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"CENP-A containing nucleosome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"CENP-S-T-W-X","type":"exact"},{"name":"CNP-T-W-S-X complex","type":"exact"},{"name":"CenH3 containing nucleosome","type":"exact"},{"name":"centromere specific nucleosome","type":"related"},{"name":"centromere-specific nucleosome","type":"related"},{"name":"centromeric nucleosome","type":"related"}],"termid":"GO:0043505","terms_by_termid":{"GO:0043505":null}}


id: SO:0001448
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A polar, hydorophilic amino acid encoded by the codons CAA and CAG. ","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamine","synonyms":[{"name":"Gln","type":"exact"},{"name":"Q","type":"exact"}],"termid":"SO:0001448"}


id: PBO:0040266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atlastin GTPase 1","termid":"PBO:0040266"}


id: PBO:0058893
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 11400","termid":"PBO:0058893"}


id: GO:0010379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phaseic acid (PA), a catabolite of the plant hormone abscisic acid (ABA).","definition_xrefs":["MetaCyc:PWY-5271"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"apocarotenoid biosynthetic process","termid":"GO:0043289"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"phaseic acid biosynthetic process","termid":"GO:0010379"}


id: MONDO:0002390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete ossifying fibromyxoid tumor (obsolete MONDO:0002390)","termid":"MONDO:0002390","xrefs":{"Monarch":{"xref_id":"0002390"}}}


id: PBO:0072141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 18","termid":"PBO:0072141"}


id: GO:0044805
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A type of nucleophagy, distinct from piecemeal microautophagy of the nucleus (PNM) where the nuclear material is delivered to the vacuole/lysosome for breakdown and recycling later than observed for PNM.","definition_xrefs":["GOC:jl","PMID:22768199","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete late nucleophagy (obsolete GO:0044805)","termid":"GO:0044805"}


id: PBO:0029618
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0029618"}


id: MONDO:0001945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease believed to be caused by a viral illness that triggers degeneration of the nerve cells in the substantia nigra. Overall, this degeneration leads to clinical parkinsonism.","definition_xrefs":["Wikipedia:Postencephalitic_parkinsonism"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secondary Parkinson disease","termid":"MONDO:0006966"},{"relation_name":"is_a","term_name":"parkinsonian disorder","termid":"MONDO:0021095"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"postencephalitic Parkinson disease","secondary_identifiers":["MEDGEN:10591","SCTID:19972008","MESH:D010301","EFO:1001402","UMLS:C0030568","ICD10CM:G21.3","DOID:14332","NCIT:C34898","Orphanet:97349","GARD:19370"],"synonyms":[{"name":"postencephalitic Parkinsonism","type":"exact"},{"name":"postencephalitic parkinsonism","type":"exact"}],"termid":"MONDO:0001945","xrefs":{"Monarch":{"xref_id":"0001945"}}}


id: SO:0002268
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Endogenous retrovirus (ERV) retrotransposons are abundant in the genomes of jawed vertebrates. Human ERVs (HERVs) are classified based on their homologies to animal retroviruses. Class I families are similar in sequence to mammalian Gammaretroviruses (type C) and Epsilonretroviruses (Type E). Class II families show homology to mammalian Betaretroviruses (Type B) and Deltaretroviruses (Type D). F-Class III families are similar to foamy viruses.","definition_xrefs":["PMID:17984973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"LTR_retrotransposon","termid":"SO:0000186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endogenous_Retrovirus_LTR_retrotransposon","synonyms":[{"name":"Endogenous Retrovirus LTR retrotransposon","type":"exact"},{"name":"HERV","type":"exact"},{"name":"RLE retrotransposon","type":"exact"}],"termid":"SO:0002268"}


id: GO:0019480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-alanine to pyruvate, with D-alanine as an intermediate.","definition_xrefs":["MetaCyc:ALADEG-PWY"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-alanine catabolic process","termid":"GO:0042853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"L-alanine oxidation to pyruvate via D-alanine","termid":"GO:0019480"}


id: FYPO:0003372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is too low to detect during one or both meiotic nuclear divisions. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during meiotic cell cycle","termid":"FYPO:0006975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during meiosis","synonyms":[{"name":"RNA absent from cell during meiotic nuclear division","type":"exact"},{"name":"transcripts absent from cell during meiosis","type":"exact"},{"name":"undetectable cellular RNA level during meiosis","type":"exact"}],"termid":"FYPO:0003372"}


id: PBO:0056217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B18","termid":"PBO:0056217"}


id: PBO:0056805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MFSD2 lysolipid transporter B, sphingolipid","termid":"PBO:0056805"}


id: MONDO:0006905
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, small and slightly elevated brown or black skin lesion with usually well-demarcated borders. It is characterized by the presence of a melanocytic proliferation resulting in the formation of uniform cellular nests. Sometimes the clinical and morphologic features may be difficult to distinguish from melanoma.","definition_xrefs":["NCIT:C4751"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanocytic nevus","termid":"MONDO:0005073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pigmented spindle cell nevus","secondary_identifiers":["MESH:D018331","MEDGEN:105378","SCTID:254812004","UMLS:C0474967"],"synonyms":[{"name":"spindle cell Nevus of Reed","type":"exact"}],"termid":"MONDO:0006905","xrefs":{"Monarch":{"xref_id":"0006905"}}}


id: MONDO:0014729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the MAG gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 75","secondary_identifiers":["GARD:17813","OMIM:616680","Orphanet:459056","UMLS:C4225250","MEDGEN:896387","DOID:0110820"],"synonyms":[{"name":"MAG hereditary spastic paraplegia","type":"exact"},{"name":"SPG75","type":"exact"},{"name":"autosomal recessive spastic paraplegia 75","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 75","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in MAG","type":"exact"},{"name":"hereditary spastic paraplegia type 75","type":"exact"},{"name":"spastic paraplegia 75, autosomal recessive","type":"exact"}],"termid":"MONDO:0014729","xrefs":{"Monarch":{"xref_id":"0014729"}}}


id: FYPO:0000243
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population growth phenotype in which cells grow normally (i.e. indistinguishably from wild type) in a medium containing L-proline as the nitrogen source.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000139","FYPO:0002057","FYPO:0000257","FYPO:0002058","FYPO:0000003"],"is_obsolete":false,"name":"normal growth on proline nitrogen source","synonyms":[{"name":"growth defect, normal growth with proline nitrogen source","type":"related"},{"name":"normal cell population growth on proline nitrogen source","type":"exact"},{"name":"normal vegetative cell population growth on proline nitrogen source","type":"exact"}],"termid":"FYPO:0000243"}


id: PR:000027617
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A transcription factor zip1 unmodified form in Schizosaccharomyces pombe.","definition_xrefs":["PomBase:MAH","PMID:15660136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription factor zip1","termid":"PR:000027614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor zip1 unmodified form (Schizosaccharomyces pombe)","pombase_gene_id":"SPAC25G10.03","synonyms":[{"name":"Spom-zip1/UnMod","type":"exact"}],"termid":"PR:000027617"}


id: PBO:0055498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2932","termid":"PBO:0055498"}


id: MONDO:0000536
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the pharynx.","definition_xrefs":["NCIT:C102872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pharynx cancer","termid":"MONDO:0005517"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"},{"relation_name":"is_a","term_name":"carcinoma of pharynx","termid":"MONDO:0021345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"pharyngeal squamous cell carcinoma","secondary_identifiers":["EFO:1001965","MEDGEN:728086","SCTID:408649007","UMLS:C1319317","DOID:0050921"],"synonyms":[{"name":"pharyngeal (including hypopharyngeal and oropharyngeal) squamous cell carcinoma","type":"exact"},{"name":"pharyngeal squam. cell carcinoma","type":"exact"},{"name":"pharyngeal squamous cell carcinoma","type":"exact"},{"name":"pharyngeal throat squamous cell cancer","type":"exact"},{"name":"pharynx squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0000536","xrefs":{"Monarch":{"xref_id":"0000536"}}}


id: GO:0001886
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The change in form (cell shape and size) that occurs during the differentiation of an endothelial cell.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell morphogenesis","termid":"GO:0003382"},{"relation_name":"part_of","term_name":"endothelial cell development","termid":"GO:0001885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial cell morphogenesis","termid":"GO:0001886"}


id: GO:0032646
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of hepatocyte growth factor production.","definition_xrefs":["GOC:mah","PMID:1838014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"regulates","term_name":"hepatocyte growth factor production","termid":"GO:0032605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of hepatocyte growth factor production","secondary_identifiers":["GO:0048176"],"synonyms":[{"name":"regulation of HGF production","type":"exact"},{"name":"regulation of hepatocyte growth factor biosynthetic process","type":"narrow"},{"name":"regulation of scatter factor production","type":"exact"}],"termid":"GO:0032646"}


id: PBO:0040004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL14EP divergent transcript","termid":"PBO:0040004"}


id: GO:0008210
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving estrogens, C18 steroid hormones that can stimulate the development of female sexual characteristics. Also found in plants.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid metabolic process","termid":"GO:0008202"},{"relation_name":"is_a","term_name":"hormone metabolic process","termid":"GO:0042445"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"estrogen metabolic process","synonyms":[{"name":"estrogen metabolism","type":"exact"},{"name":"oestrogen metabolic process","type":"exact"},{"name":"oestrogen metabolism","type":"exact"}],"termid":"GO:0008210"}


id: PBO:0011084
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein substrate Km, Mg2+ Km 3.0 mM","termid":"PBO:0011084"}


id: GO:0050518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-C-methyl-D-erythritol 4-phosphate + CTP = 4-CDP-2-C-methyl-D-erythritol + diphosphate.","definition_xrefs":["EC:2.7.7.60","RHEA:13429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016779"],"is_obsolete":false,"name":"2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.60-RXN","GO:0008699","KEGG_REACTION:R05633"],"synonyms":[{"name":"4-diphosphocytidyl-2-C-methyl-D-erythritol synthase activity","type":"related"},{"name":"4-diphosphocytidyl-2C-methyl-D-erythritol synthase activity","type":"exact"},{"name":"CTP:2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase activity","type":"exact"},{"name":"MCT activity","type":"related"},{"name":"MEP cytidylyltransferase activity","type":"exact"}],"termid":"GO:0050518"}


id: MONDO:0045058
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenoma or carcinoma of the pituitary gland that produces corticotropin.","definition_xrefs":["NCIT:C7909"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary tumor","termid":"MONDO:0017611"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTH-producing pituitary gland neoplasm","secondary_identifiers":["UMLS:C0278862","MEDGEN:82997"],"synonyms":[{"name":"ACTH producing pituitary gland neoplasm","type":"exact"},{"name":"ACTH-producing pituitary gland neoplasm","type":"exact"},{"name":"ACTH-producing pituitary neoplasm","type":"exact"},{"name":"ACTH-producing pituitary tumor","type":"exact"},{"name":"ACTH-producing pituitary tumour","type":"exact"},{"name":"ACTH-secreting tumor of pituitary","type":"exact"},{"name":"ACTH-secreting tumor of the pituitary","type":"exact"},{"name":"ACTH-secreting tumour of pituitary","type":"exact"},{"name":"ACTH-secreting tumour of the pituitary","type":"exact"},{"name":"adrenocorticotropin producing pituitary gland tumor","type":"exact"},{"name":"adrenocorticotropin producing pituitary gland tumour","type":"exact"},{"name":"adrenocorticotropin secreting neoplasm of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting neoplasm of the pituitary","type":"exact"},{"name":"adrenocorticotropin secreting pituitary gland tumor","type":"exact"},{"name":"adrenocorticotropin secreting pituitary gland tumour","type":"exact"},{"name":"adrenocorticotropin secreting tumor of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting tumor of the pituitary","type":"exact"},{"name":"adrenocorticotropin secreting tumour of pituitary","type":"exact"},{"name":"adrenocorticotropin secreting tumour of the pituitary","type":"exact"},{"name":"corticotropin secreting pituitary gland neoplasm","type":"exact"},{"name":"pituitary corticotropin secreting neoplasm","type":"exact"},{"name":"pituitary corticotropin secreting tumor","type":"exact"},{"name":"pituitary corticotropin secreting tumour","type":"exact"}],"termid":"MONDO:0045058","xrefs":{"Monarch":{"xref_id":"0045058"}}}


id: PBO:0033819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor Srp2","termid":"PBO:0033819"}


id: PBO:0085377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane arginine permease; requires phosphatidyl ethanolamine (PE) for localization, exclusively associated with lipid rafts; mutation confers canavanine resistance; CAN1 has a paralog, ALP1, that arose from the whole genome duplication","termid":"PBO:0085377"}


id: PBO:0053668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 847","termid":"PBO:0053668"}


id: PBO:0108764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor, nutrient sensing, zf-GATA-type Gaf1","termid":"PBO:0108764"}


id: PBO:0082079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-deoxynucleotidase involved in deoxyribonucleoside monophosphate degradation; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm and nucleus; non-essential gene; YBR242W has a paralog, YGL101W, that arose from the whole genome duplication","termid":"PBO:0082079"}


id: GO:0006633
data:
  {"annotated_genes":["SJAG_03526","SJAG_01946","SJAG_01300","SJAG_03972","SJAG_01356","SJAG_03943","SJAG_01238","SJAG_00630","SJAG_02007","SJAG_00305","SJAG_03130","SJAG_03313","SJAG_04107","SJAG_02769","SJAG_02717","SJAG_01458","SJAG_01271","SJAG_00902","SJAG_02885","SJAG_03198","SJAG_03180","SJAG_04007","SJAG_03553","SJAG_04972","SJAG_00099"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[65342,69304,72176,78886,79310,93449,97022,104070,109510,110752],"is_not":false,"summary":null,"term":"GO:0006633"},{"annotations":[75630,81684,113376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030497"},{"annotations":[79679,93956],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034625"},{"annotations":[79683,93957],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019367"},{"annotations":[99173,99874,76973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009107"},{"annotations":[74215,106339],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042759"},{"annotations":[72803],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045717"},{"annotations":[99697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900535"},{"annotations":[72194,77156],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006636"},{"annotations":[75627,74575,79681,93960,105485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042761"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a fatty acid, any of the aliphatic monocarboxylic acids that can be liberated by hydrolysis from naturally occurring fats and oils. Fatty acids are predominantly straight-chain acids of 4 to 24 carbon atoms, which may be saturated or unsaturated; branched fatty acids and hydroxy fatty acids also occur, and very long chain acids of over 30 carbons are found in waxes.","definition_xrefs":["ISBN:0198506732","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid metabolic process","termid":"GO:0006631"},{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":25,"genes_by_uniquename":{"SJAG_00099":null,"SJAG_00305":null,"SJAG_00630":null,"SJAG_00902":null,"SJAG_01238":null,"SJAG_01271":null,"SJAG_01300":null,"SJAG_01356":null,"SJAG_01458":null,"SJAG_01946":null,"SJAG_02007":null,"SJAG_02717":null,"SJAG_02769":null,"SJAG_02885":null,"SJAG_03130":null,"SJAG_03180":null,"SJAG_03198":null,"SJAG_03313":null,"SJAG_03526":null,"SJAG_03553":null,"SJAG_03943":null,"SJAG_03972":null,"SJAG_04007":null,"SJAG_04107":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Fatty_acid_synthesis","GO:0000037"],"synonyms":[{"name":"fatty acid anabolism","type":"exact"},{"name":"fatty acid biosynthesis","type":"exact"},{"name":"fatty acid formation","type":"exact"},{"name":"fatty acid synthesis","type":"exact"}],"termid":"GO:0006633","terms_by_termid":{"GO:0006633":null,"GO:0006636":null,"GO:0009107":null,"GO:0019367":null,"GO:0030497":null,"GO:0034625":null,"GO:0042759":null,"GO:0042761":null,"GO:0045717":null,"GO:1900535":null}}


id: MONDO:0850075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"craniosynostosis","termid":"MONDO:0015469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"non-syndromic unifrontosphenoidal craniosynostosis","secondary_identifiers":["GARD:22472","MEDGEN:1843063","UMLS:C5680399","Orphanet:620139"],"termid":"MONDO:0850075","xrefs":{"Monarch":{"xref_id":"0850075"}}}


id: PR:P50519
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- hsp9 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P50519"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein hsp9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP8A3.04c","synonyms":[{"name":"Spom972h-hsp9","type":"exact"}],"termid":"PR:P50519"}


id: MONDO:0018730
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An instance of rare venous malformation that is caused by a modification of the individual's genome.","definition_xrefs":["MONDO:patterns/genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare genetic venous malformation (obsolete MONDO:0018730)","secondary_identifiers":["Orphanet:459548"],"synonyms":[{"name":"genetic rare venous malformation","type":"exact"}],"termid":"MONDO:0018730","xrefs":{"Monarch":{"xref_id":"0018730"}}}


id: PBO:0001283
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-ranBP","termid":"PBO:0001283"}


id: GO:0031954
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the phosphorylation by a protein of one or more of its own residues.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein phosphorylation","termid":"GO:0001934"},{"relation_name":"is_a","term_name":"regulation of protein autophosphorylation","termid":"GO:0031952"},{"relation_name":"positively_regulates","term_name":"protein autophosphorylation","termid":"GO:0046777"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein autophosphorylation","synonyms":[{"name":"activation of protein amino acid autophosphorylation","type":"narrow"},{"name":"positive regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"stimulation of protein amino acid autophosphorylation","type":"narrow"},{"name":"up regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"up-regulation of protein amino acid autophosphorylation","type":"exact"},{"name":"upregulation of protein amino acid autophosphorylation","type":"exact"}],"termid":"GO:0031954"}


id: PBO:0057685
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1273h","termid":"PBO:0057685"}


id: GO:0046140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of corrin, C19H22N4, the fundamental heterocyclic skeleton of the corrinoids. It consists of four reduced pyrrole rings joined into a macrocyclic ring. Corrin is the core of the vitamin B12 molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0008150","GO:0033013"],"is_obsolete":false,"name":"corrin biosynthetic process","synonyms":[{"name":"corrin anabolism","type":"exact"},{"name":"corrin biosynthesis","type":"exact"},{"name":"corrin formation","type":"exact"},{"name":"corrin synthesis","type":"exact"}],"termid":"GO:0046140"}


id: GO:0045062
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of T cell selection that occurs in extrathymic locations, often resulting T cells of distinct specificities from those selected in the thymus.","definition_xrefs":["ISBN:0781735149","PMID:7880383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell selection","termid":"GO:0045058"},{"relation_name":"part_of","term_name":"extrathymic T cell differentiation","termid":"GO:0033078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"extrathymic T cell selection","synonyms":[{"name":"extrathymic T lymphocyte selection","type":"exact"},{"name":"extrathymic T-cell selection","type":"exact"},{"name":"extrathymic T-lymphocyte selection","type":"exact"}],"termid":"GO:0045062"}


id: GO:7770008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: cholate + L-histidine = L-histidocholate + H2O.","definition_xrefs":["PMID:38326608","RHEA:79099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid conjugated cholate hydrolase activity","termid":"GO:7770003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"L-histidine conjugated cholate hydrolase activity","termid":"GO:7770008"}


id: SO:0000525
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in rearranged configuration including at least one V-gene, one VJ-gene and one J-gene.","direct_ancestors":[{"relation_name":"has_part","term_name":"V_gene_segment","termid":"SO:0000466"},{"relation_name":"has_part","term_name":"J_gene_segment","termid":"SO:0000470"},{"relation_name":"has_part","term_name":"VJ_gene_segment","termid":"SO:0000576"},{"relation_name":"is_a","term_name":"vertebrate_immunoglobulin_T_cell_receptor_rearranged_gene_cluster","termid":"SO:0000938"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V_VJ_J_cluster","synonyms":[{"name":"V VJ J cluster","type":"exact"},{"name":"V-(VJ)-J-CLUSTER","type":"exact"}],"termid":"SO:0000525"}


id: MONDO:0033621
data:
  {"annotated_genes":["SJAG_01352"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87706],"is_not":false,"summary":null,"term":"MONDO:0033621"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01352":null},"genotype_count":0,"is_obsolete":false,"name":"spinal muscular atrophy, infantile, James type","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5436669","MEDGEN:1764556","OMIM:619042"],"synonyms":[{"name":"SMAJI","type":"exact"}],"termid":"MONDO:0033621","terms_by_termid":{"MONDO:0033621":null},"xrefs":{"Monarch":{"xref_id":"0033621"}}}


id: FYPO:0007746
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the spindle elongates during metaphase of the first meiotic nuclear division, when elongation is normally paused.","definition_xrefs":["PomBase:mah","PMID:32723864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal spindle assembly during meiosis I","termid":"FYPO:0007745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0005447","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"normal spindle elongation during meiotic metaphase I","synonyms":[{"name":"normal spindle elongation during meiotic metaphase I spindle phase II","type":"exact"},{"name":"normal spindle elongation during metaphase I","type":"exact"},{"name":"normal spindle elongation during metaphase of meiosis I","type":"exact"}],"termid":"FYPO:0007746"}


id: GO:0043795
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: A + D-glyceraldehyde + H2O = (R)-glycerate + AH2 + H+.","definition_xrefs":["RHEA:36047","PMID:10095793"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors","termid":"GO:0016903"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"glyceraldehyde oxidoreductase activity","secondary_identifiers":["EC:1.2.99.8"],"termid":"GO:0043795"}


id: PBO:0062532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily A member 1 pseudogene","termid":"PBO:0062532"}


id: PBO:0053864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1139","termid":"PBO:0053864"}


id: PBO:0048165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frizzled class receptor 10","termid":"PBO:0048165"}


id: MONDO:1012467
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"postpartum dysgalactia syndrome, non-human animal","termid":"MONDO:1011680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"postpartum dysgalactia syndrome, pig","secondary_identifiers":["OMIA:001822-9823"],"termid":"MONDO:1012467","xrefs":{"Monarch":{"xref_id":"1012467"}}}


id: GO:0009677
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Rudimentary double fertilization where one of the two sperm nuclei from the pollen tube fuses with the egg nucleus to form a 2n zygote, and the other fuses with the ventral canal cell nucleus to form a second zygote, which soon degenerates. An example of this process is found in the Gnetophytes, such as Welwitschia mirabilis.","definition_xrefs":["GOC:tb","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fertilization","termid":"GO:0009566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"double fertilization forming two zygotes","termid":"GO:0009677"}


id: SO:1000048
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation with two breaks; two chromosome segments have simply been exchanged.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosomal_translocation","termid":"SO:1000044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"reciprocal_chromosomal_translocation","synonyms":[{"name":"reciprocal chromosomal translocation","type":"exact"}],"termid":"SO:1000048"}


id: PBO:0060639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 2","termid":"PBO:0060639"}


id: MONDO:0030785
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","secondary_identifiers":["UMLS:C5676961","OMIM:619827","MEDGEN:1808159","DOID:0081234"],"synonyms":[{"name":"MRT75","type":"exact"},{"name":"intellectual developmental disorder, autosomal recessive 75, with neuropsychiatric features and variant lissencephaly","type":"exact"}],"termid":"MONDO:0030785","xrefs":{"Monarch":{"xref_id":"0030785"}}}


id: PBO:0031006
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_cell","termid":"PBO:0031006"}


id: PBO:0005137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CUE domain protein Cue1/4 family involved in ER associated protein catabolism (predicted)","termid":"PBO:0005137"}


id: PBO:0031311
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_assembly","termid":"PBO:0031311"}


id: CHEBI:17306
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose","termid":"CHEBI:17306"}


id: PBO:0078753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase 44 homolog","termid":"PBO:0078753"}


id: PR:O59744
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC530.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59744"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C530.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.08","synonyms":[{"name":"Spom972h-SPBC530.08","type":"exact"}],"termid":"PR:O59744"}


id: MONDO:0024973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cattle disease of uncertain cause, probably an allergic reaction.","definition_xrefs":["MESH:D011016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bovine respiratory disease complex","termid":"MONDO:0005678"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia, atypical interstitial, of cattle","synonyms":[{"name":"Adenomatoses, bovine pulmonary","type":"related"},{"name":"Fog fever","type":"related"},{"name":"adenomatosis, bovine pulmonary","type":"related"},{"name":"adenomatosis, pulmonary, bovine","type":"related"},{"name":"atypical interstitial pneumonia of cattle","type":"related"},{"name":"bovine pulmonary Adenomatoses","type":"related"},{"name":"bovine pulmonary adenomatosis","type":"related"},{"name":"emphysema, acute bovine pulmonary","type":"related"},{"name":"fever, Fog","type":"related"},{"name":"pulmonary Adenomatoses, bovine","type":"related"},{"name":"pulmonary adenomatosis, bovine","type":"related"}],"termid":"MONDO:0024973","xrefs":{"Monarch":{"xref_id":"0024973"}}}


id: PBO:0078102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking protein particle complex subunit 10","termid":"PBO:0078102"}


id: PBO:0059982
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4L pseudogene 2","termid":"PBO:0059982"}


id: PBO:0085654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrial function; interacts with Hsp82p and copurifies with Ipl1p; expression is copper responsive and downregulated in strains deleted for MAC1, a copper-responsive transcription factor; human homolog MYG1 complements yeast null mutant","termid":"PBO:0085654"}


id: PBO:0066387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RecQ like helicase","termid":"PBO:0066387"}


id: PBO:0060803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit S6 pseudogene 1","termid":"PBO:0060803"}


id: PBO:0077988
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (TGC) 10-1","termid":"PBO:0077988"}


id: GO:0061291
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to the branching of the ureteric bud. In this pathway, the activated receptor signals via downstream effectors that result in the inhibition of beta-catenin phosphorylation, thereby preventing degradation of beta-catenin. Stabilized beta-catenin can then accumulate and travel to the nucleus to trigger changes in transcription of target genes.","definition_xrefs":["GOC:mtg_kidney_jan10"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in ureteric bud branching (obsolete GO:0061291)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in ureteric bud branching","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in ureteric bud branching","type":"exact"}],"termid":"GO:0061291"}


id: GO:0031615
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The subcomplex of the cytosolic proteasome regulatory particle that forms the peripheral lid, which is added on top of the base subcomplex.","definition_xrefs":["GOC:mtg_sensu","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proteasome regulatory particle, lid subcomplex","termid":"GO:0008541"},{"relation_name":"part_of","term_name":"cytosolic proteasome regulatory particle","termid":"GO:0031600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005829"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991","GO:0005829"],"is_obsolete":false,"name":"cytosolic proteasome regulatory particle, lid subcomplex","termid":"GO:0031615"}


id: PBO:0050608
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxysteroid 17-beta dehydrogenase 2","termid":"PBO:0050608"}


id: GO:1903966
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monounsaturated fatty acid.","definition_xrefs":["GO_REF:0000068","GOC:TermGenie","GOC:hjd","PMID:16443825"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid biosynthetic process","termid":"GO:0006633"},{"relation_name":"is_a","term_name":"monounsaturated fatty acid metabolic process","termid":"GO:1903964"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0006629","GO:0008150"],"is_obsolete":false,"name":"monounsaturated fatty acid biosynthetic process","synonyms":[{"name":"monounsaturated fatty acid anabolism","type":"exact"},{"name":"monounsaturated fatty acid biosynthesis","type":"exact"},{"name":"monounsaturated fatty acid formation","type":"exact"},{"name":"monounsaturated fatty acid synthesis","type":"exact"}],"termid":"GO:1903966"}


id: PBO:0088814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GEF","termid":"PBO:0088814"}


id: SO:0002206
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Identifies the biological source of the specified span of the sequence","definition_xrefs":["NCBI:tm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_attribute","termid":"SO:0000400"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_source","synonyms":[{"name":"INSDC_feature:source","type":"exact"},{"name":"sequence source","type":"exact"}],"termid":"SO:0002206"}


id: MONDO:0019125
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, clinically heterogeneous, multisystemic inflammatory disease characterized by inflammation of the cartilage and proteoglycan rich structures leading to cartilage damage with joint, ocular and cardiovascular involvement.","definition_xrefs":["Orphanet:728"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"chondromalacia","termid":"MONDO:0002342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relapsing polychondritis","secondary_identifiers":["DOID:2556","EFO:1001148","NANDO:1200283","NCIT:C157268","SCTID:72275000","GARD:7417","MEDGEN:45995","NANDO:2200428","ICD9:733.99","icd11.foundation:1412888287","NANDO:2100154","UMLS:C0032453","ICD10CM:M94.1","MedDRA:10038304","MESH:D011081","NORD:1655"],"synonyms":[{"name":"chondromalacia, systemic","type":"exact"},{"name":"chronic atrophic polychondritis","type":"related"},{"name":"recurrent polychondritis","type":"related"}],"termid":"MONDO:0019125","xrefs":{"Monarch":{"xref_id":"0019125"}}}


id: PBO:0058843
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8072","termid":"PBO:0058843"}


id: PBO:0085364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphoribosylanthranilate isomerase; catalyzes the third step in tryptophan biosynthesis; in 2004, the sequence of TRP1 from strain S228C was updated by changing the previously annotated internal STOP (TAA) to serine (TCA); enhances vegetative growth at low and high temperatures when used as an auxotrophic marker in strains such as W303","termid":"PBO:0085364"}


id: MONDO:0022553
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BD syndrome","termid":"MONDO:0022553","xrefs":{"Monarch":{"xref_id":"0022553"}}}


id: SO:0000820
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosome originating in a chloroplast.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_origin","term_name":"chloroplast_sequence","termid":"SO:0000745"},{"relation_name":"is_a","term_name":"chromosome","termid":"SO:0000340"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloroplast_chromosome","synonyms":[{"name":"chloroplast chromosome","type":"exact"}],"termid":"SO:0000820"}


id: GO:0021534
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the hindbrain.","definition_xrefs":["GOC:cls","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"hindbrain development","termid":"GO:0030902"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in hindbrain","termid":"GO:0021534"}


id: GO:0047953
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: glycerol + NADP+ = dihydroxyacetone + NADPH + H+.","definition_xrefs":["RHEA:12753"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"glycerol 2-dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R01039","MetaCyc:GLYCEROL-2-DEHYDROGENASE-NADP+-RXN","EC:1.1.1.156"],"synonyms":[{"name":"DHA oxidoreductase activity","type":"related"},{"name":"dihydroxyacetone (reduced nicotinamide adenine dinucleotide phosphate) reductase activity","type":"related"},{"name":"dihydroxyacetone reductase (NADPH)","type":"related"},{"name":"dihydroxyacetone reductase activity","type":"related"},{"name":"glycerol:NADP+ 2-oxidoreductase (glycerone-forming)","type":"related"}],"termid":"GO:0047953"}


id: PBO:0003342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF1242 family protein, secretory pathway component Ksh1 (predicted)","termid":"PBO:0003342"}


id: PBO:0049245
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GrpE like 2, mitochondrial","termid":"PBO:0049245"}


id: PBO:0027984
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_elongated_multinucleate_cell_with_abnormal_septum_morphology","termid":"PBO:0027984"}


id: PBO:0116577
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gocam_title_termid","termid":"PBO:0116577"}


id: PBO:0049531
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2A.Z histone pseudogene 2","termid":"PBO:0049531"}


id: MONDO:0018000
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocythemia with distal limb defects is a rare, genetic syndrome with limb reduction defects characterized by thrombocytosis, unilateral transverse limb defects (ranging from absence of phalanges to absence of hand or forearm) and splenomegaly.","definition_xrefs":["Orphanet:329319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hematological disorder","termid":"MONDO:0009332"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005497"],"is_obsolete":false,"name":"hereditary thrombocytosis with transverse limb defect","secondary_identifiers":["MEDGEN:1653707","UMLS:C4749944","GARD:21487"],"synonyms":[{"name":"familial thrombocytosis with transverse limb defect","type":"exact"},{"name":"thrombocythemia with distal limb defects","type":"related"}],"termid":"MONDO:0018000","xrefs":{"Monarch":{"xref_id":"0018000"}}}


id: MONDO:0015136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete immunodeficiency due to a genetic complement cascade protein anomaly (obsolete MONDO:0015136)","secondary_identifiers":["Orphanet:101992","icd11.foundation:1222145690"],"synonyms":[{"name":"immunodeficiency due to a complement cascade protein anomaly","type":"related"}],"termid":"MONDO:0015136","xrefs":{"Monarch":{"xref_id":"0015136"}}}


id: GO:0071355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an interleukin-9 stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to interleukin-9","termid":"GO:0071104"},{"relation_name":"is_a","term_name":"cellular response to cytokine stimulus","termid":"GO:0071345"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to interleukin-9","synonyms":[{"name":"cellular response to IL-9","type":"exact"}],"termid":"GO:0071355"}


id: PBO:0110157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRM RNA binding protein involved in snRNA processing Thc1","termid":"PBO:0110157"}


id: PBO:0003897
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DUF3210 family protein","termid":"PBO:0003897"}


id: PBO:0038933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 1A (class I), alpha polypeptide","termid":"PBO:0038933"}


id: GO:1900517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of xylose catabolic process to ethanol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"is_a","term_name":"regulation of xylose catabolic process to ethanol","termid":"GO:1900515"},{"relation_name":"positively_regulates","term_name":"D-xylose catabolic process to ethanol","termid":"GO:0044577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975","GO:0006091"],"is_obsolete":false,"name":"positive regulation of xylose catabolic process to ethanol","synonyms":[{"name":"activation of xylose catabolic process to ethanol","type":"narrow"},{"name":"activation of xylose catabolism to ethanol","type":"exact"},{"name":"positive regulation of xylose catabolism to ethanol","type":"exact"},{"name":"up regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"up regulation of xylose catabolism to ethanol","type":"exact"},{"name":"up-regulation of xylose catabolic process to ethanol","type":"exact"},{"name":"up-regulation of xylose catabolism to ethanol","type":"exact"},{"name":"upregulation of xylose catabolic process to ethanol","type":"exact"},{"name":"upregulation of xylose catabolism to ethanol","type":"exact"}],"termid":"GO:1900517"}


id: PBO:0077113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of inner mitochondrial membrane 22","termid":"PBO:0077113"}


id: PBO:0031750
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_methylation","termid":"PBO:0031750"}


id: PBO:0039243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aldehyde dehydrogenase 1 family member A3","termid":"PBO:0039243"}


id: MONDO:0019634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial nasal acilia is a rare genetic otorhinolaryngologic disease characterized by respiratory morbidity due to lack of cilia on the respiratory tract epithelial cells. The disease manifests from birth with respiratory distress, neonatal pneumonia, dyspnea, lobar atelectasis and bronchiectasis. Recurrent infections of the upper and lower respiratory tract, chronic humid coughing, and chronic sinusitis, otitis and rhinitis are typical lifelong presenting conditions.","definition_xrefs":["Orphanet:922"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary otorhinolaryngologic disease","termid":"MONDO:0018751"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial nasal acilia","secondary_identifiers":["MEDGEN:1647725","SCTID:763532008","UMLS:C4706505","GARD:2254"],"termid":"MONDO:0019634","xrefs":{"Monarch":{"xref_id":"0019634"}}}


id: PBO:0067787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 89","termid":"PBO:0067787"}


id: PBO:0054422
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1818","termid":"PBO:0054422"}


id: GO:0017067
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phospho-5'-adenylyl sulfate + L-tyrosine methyl ester = L-tyrosine methyl ester 4-sulfate + adenosine 3',5'-diphosphate + H+.","definition_xrefs":["RHEA:19977","EC:2.8.2.9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016782"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016782","GO:0016740"],"is_obsolete":false,"name":"tyrosine-ester sulfotransferase activity","secondary_identifiers":["KEGG_REACTION:R04213","GO:0008128","MetaCyc:TYROSINE-ESTER-SULFOTRANSFERASE-RXN"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:L-tyrosine-methyl-ester sulfotransferase activity","type":"related"},{"name":"L-tyrosine methyl ester sulfotransferase activity","type":"related"},{"name":"aryl sulfotransferase IV","type":"related"},{"name":"tyrosine-ester sulphotransferase activity","type":"exact"}],"termid":"GO:0017067"}


id: MONDO:0007176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Helicoid peripapillary chorioretinal degeneration is a rare autosomal dominantly inherited chorioretinal degeneration disease, presenting at birth or infancy, characterized by progressive bilateral retinal and choroidal atrophy, appearing as lesions on the optic nerve and peripheral ocular fundus and leading to central vision loss. Congenital anterior polar cataracts are sometimes associated with this disease.","definition_xrefs":["Orphanet:86813"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"helicoid peripapillary chorioretinal degeneration","secondary_identifiers":["MESH:C566236","GARD:16757","SCTID:724384008","icd11.foundation:896652469","OMIM:108985","DOID:0111228","MEDGEN:354733","UMLS:C1862382"],"synonyms":[{"name":"SCRA","type":"exact"},{"name":"SVEINSSON chorioretinal atrophy","type":"related"},{"name":"Sveinsson chorioretinal atrophy","type":"exact"},{"name":"atrophia areata","type":"exact"},{"name":"helicoidal peripapillary chorioretinal Degeneration","type":"related"},{"name":"peripapillary chorioretinal Degeneration, Icelandic type","type":"related"}],"termid":"MONDO:0007176","xrefs":{"Monarch":{"xref_id":"0007176"}}}


id: GO:1904218
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of CDP-diacylglycerol-serine O-phosphatidyltransferase activity.","definition_xrefs":["GOC:BHF","GO_REF:0000059","PMID:16120614","GOC:TermGenie","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity (obsolete GO:1904218)","synonyms":[{"name":"down regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of PS synthase activity","type":"exact"},{"name":"down regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"down regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"down-regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of PS synthase activity","type":"exact"},{"name":"down-regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"down-regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"down-regulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"downregulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of PS synthase activity","type":"exact"},{"name":"downregulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"downregulation of phosphatidylserine synthase activity","type":"exact"},{"name":"downregulation of phosphatidylserine synthetase activity","type":"exact"},{"name":"inhibition of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of CDP-diacylglycerol-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of CDP-diglyceride:serine phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of PS synthase activity","type":"narrow"},{"name":"inhibition of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"narrow"},{"name":"inhibition of phosphatidylserine synthase activity","type":"narrow"},{"name":"inhibition of phosphatidylserine synthetase activity","type":"narrow"},{"name":"negative regulation of CDP-diacylglycerol-L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of CDP-diacylglycerol:L-serine 3-O-phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of CDP-diglyceride-L-serine phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of CDP-diglyceride:serine phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of CDP-diglycerine-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of CDPdiacylglycerol-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of CDPdiglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of PS synthase activity","type":"exact"},{"name":"negative regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol (CDPdiglyceride):L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of cytidine 5'-diphospho-1,2-diacyl-sn-glycerol:L-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of cytidine diphosphoglyceride-serine O-phosphatidyltransferase activity","type":"exact"},{"name":"negative regulation of phosphatidylserine synthase activity","type":"exact"},{"name":"negative regulation of phosphatidylserine synthetase activity","type":"exact"}],"termid":"GO:1904218"}


id: GO:0061583
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a colon epithelial cell guided by a specific chemical concentration gradient. Movement may be towards a higher concentration (positive chemotaxis) or towards a lower concentration (negative chemotaxis).","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell chemotaxis","termid":"GO:0060326"},{"relation_name":"is_a","term_name":"colon epithelial cell migration","termid":"GO:0061580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"colon epithelial cell chemotaxis","termid":"GO:0061583"}


id: PBO:0047657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FKBP prolyl isomerase 9","termid":"PBO:0047657"}


id: MONDO:0005928
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition characterized by a chronically swollen limb, often a leg with stasis dermatitis and ulcerations. This syndrome can appear soon after phlebitis or years later. Postphlebitic syndrome is the result of damaged or incompetent venous valves in the limbs. Distended, tortuous varicose veins are usually present. Leg pain may occur after long period of standing.","definition_xrefs":["MESH:D011186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"venous insufficiency","termid":"MONDO:0000945"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"post-thrombotic syndrome","secondary_identifiers":["ICD9:459.12","UMLS:C0032807","EFO:0007452","SCTID:20427003","DOID:2364","ICD10CM:I87.0","ICD9:459.11","MEDGEN:46043","ICD9:459.13","ICD9:459.10","ICD9:459.1"],"synonyms":[{"name":"postphlebetic syndrome with inflammation","type":"exact"},{"name":"postphlebetic syndrome with ulcer","type":"exact"},{"name":"postphlebetic syndrome with ulcer and inflammation","type":"exact"},{"name":"postphlebitic syndrome","type":"exact"},{"name":"venous stress disorder","type":"exact"}],"termid":"MONDO:0005928","xrefs":{"Monarch":{"xref_id":"0005928"}}}


id: PBO:0032720
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_multiple_cell_divisions,_spherical_cell_with_cell_lysis","termid":"PBO:0032720"}


id: PBO:0034087
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ectoparasite_of","termid":"PBO:0034087"}


id: GO:0010118
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of opening or closing of stomata, which is directly related to the stomatal conductance (measuring rate of passage of either water vapor or carbon dioxide (CO2) through stomata).","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular process","termid":"GO:0009987"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal movement","termid":"GO:0010118"}


id: PBO:0046356
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ectonucleotide pyrophosphatase/phosphodiesterase 7 pseudogene 14","termid":"PBO:0046356"}


id: PBO:0046535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group 3 member 2","termid":"PBO:0046535"}


id: PBO:0043403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cms1 ribosomal small subunit homolog","termid":"PBO:0043403"}


id: PBO:0087662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the import motor (PAM complex); the PAM complex is a  component of the Translocase of the Inner Mitochondrial membrane (TIM23 complex); essential J-protein cochaperone that stimulates Ssc1p ATPase activity to drive import; inhibited by Pam16p","termid":"PBO:0087662"}


id: FYPO:0006841
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of progression through S phase of the meiotic cell cycle (preceding meiosis I) is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased duration of meiotic cell cycle phase","termid":"FYPO:0002220"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of meiotic S phase","synonyms":[{"name":"delayed meiotic S phase progression","type":"related"},{"name":"increased duration of meiotic S phase progression","type":"exact"},{"name":"increased duration of premeiotic DNA replication","type":"related"},{"name":"prolonged meiotic S phase","type":"exact"},{"name":"prolonged premeiotic DNA replication","type":"related"}],"termid":"FYPO:0006841"}


id: MONDO:0975951
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spastic paraplegia, mitochondrial","secondary_identifiers":["OMIM:500018"],"termid":"MONDO:0975951","xrefs":{"Monarch":{"xref_id":"0975951"}}}


id: GO:1901938
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (-)-exo-alpha-bergamotene.","definition_xrefs":["PMID:22867794","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene metabolic process","termid":"GO:0051761"},{"relation_name":"is_a","term_name":"olefin metabolic process","termid":"GO:1900673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(-)-exo-alpha-bergamotene metabolic process","synonyms":[{"name":"(-)-exo-alpha-bergamotene metabolism","type":"exact"}],"termid":"GO:1901938"}


id: GO:0061749
data:
  {"annotated_genes":["SJAG_04064"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80828],"is_not":false,"summary":null,"term":"GO:0061749"}]},"cv_name":"molecular_function","definition":"Unwinding a DNA helix containing forked DNA, driven by ATP hydrolysis.","definition_xrefs":["GOC:dph","PMID:26277776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA helicase activity","termid":"GO:0003678"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04064":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003824","GO:0016853","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"forked DNA-dependent helicase activity","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0061749","terms_by_termid":{"GO:0061749":null}}


id: MONDO:1010643
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia B that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia B, non-human animal","termid":"MONDO:1010075"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia B, dog","secondary_identifiers":["OMIA:000438-9615"],"termid":"MONDO:1010643","xrefs":{"Monarch":{"xref_id":"1010643"}}}


id: MONDO:0008470
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with punctate corneal dystrophy","secondary_identifiers":["UMLS:C1866727","DOID:0112286","MESH:C566660","OMIM:183850","Orphanet:163673","MEDGEN:357119"],"synonyms":[{"name":"spondyloepiphyseal dysplasia with punctate corneal dystrophy","type":"exact"},{"name":"spondyloepiphyseal dysplasia, Byers type","type":"exact"}],"termid":"MONDO:0008470","xrefs":{"Monarch":{"xref_id":"0008470"}}}


id: GO:0048100
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the anterior/posterior axis of the wing disc, a precursor to the wing.","definition_xrefs":["PMID:10625531","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anterior/posterior pattern specification, imaginal disc","termid":"GO:0007448"},{"relation_name":"is_a","term_name":"wing disc pattern formation","termid":"GO:0035222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wing disc anterior/posterior pattern formation","termid":"GO:0048100"}


id: FYPO:0005058
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break clipping is decreased. Meiotic DNA double-strand break clipping is the process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis.","definition_xrefs":["PomBase:mah","GO:1990898","PMID:26130711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic recombination","termid":"FYPO:0000008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000293","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased meiotic DNA double-strand break clipping","synonyms":[{"name":"reduced meiotic DNA double-strand break clipping","type":"exact"}],"termid":"FYPO:0005058"}


id: GO:1901505
data:
  {"annotated_genes":["SJAG_01960","SJAG_04406","SJAG_00339","SJAG_00434","SJAG_00612","SJAG_02050","SJAG_01177","SJAG_04697","SJAG_04162","SJAG_00276","SJAG_03334"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[103384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[59416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[104873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[95349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[73743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[114319,95122,95351],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071917"},{"annotations":[90379,76804,77944],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[77945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[79526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[79527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of carbohydrate derivative from one side of a membrane to the other.","definition_xrefs":["GOC:pr","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00276":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_04162":null,"SJAG_04406":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"carbohydrate derivative transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"carbohydrate derivative transporter activity","type":"related"}],"termid":"GO:1901505","terms_by_termid":{"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0046964":null,"GO:0071917":null,"GO:0140987":null,"GO:1902557":null}}


id: PBO:0089457
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA queuosine modification protein Qtr3-like","termid":"PBO:0089457"}


id: PBO:0088195
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Zinc-finger transcription factor; involved in the diauxic shift; activates transcription of genes involved in carbon metabolism and energy production on glucose, while it activates transcription of genes involved in cell wall organization and biogenesis on glycerol-lactate; may also function as a co-repressor; capable of forming the prion [AZF1+]; relocalizes to the cytosol in response to hypoxia; contains polyglutamine and polyasparagine domains","termid":"PBO:0088195"}


id: GO:0032599
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a protein out of a membrane raft. Membrane rafts are small (10-200 nm), heterogeneous, highly dynamic, sterol- and sphingolipid-enriched membrane domains that compartmentalize cellular processes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein transport within lipid bilayer","termid":"GO:0032594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0061024"],"is_obsolete":false,"name":"protein transport out of membrane raft","synonyms":[{"name":"protein translocation out of membrane raft","type":"exact"},{"name":"protein transport out of lipid raft","type":"exact"},{"name":"receptor translocation out of membrane raft","type":"narrow"},{"name":"receptor transport out of membrane raft","type":"narrow"}],"termid":"GO:0032599"}


id: GO:0102007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + an N-acyl-L-homoserine lactone = H+ + an N-acyl-L-homoserine.","definition_xrefs":["EC:3.1.1.81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lactonohydrolase activity","termid":"GO:0046573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"acyl-L-homoserine-lactone lactonohydrolase activity","secondary_identifiers":["Reactome:R-HSA-9756150","Reactome:R-HSA-8932633","RHEA:22576","Reactome:R-HSA-9756177","Reactome:R-HSA-9756136","MetaCyc:3.1.1.81-RXN"],"termid":"GO:0102007"}


id: GO:0047496
data:
  {"annotated_genes":["SJAG_02651","SJAG_00594"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106567,106900],"is_not":false,"summary":null,"term":"GO:0047496"}]},"cv_name":"biological_process","definition":"The directed movement of a vesicle along a microtubule, mediated by motor proteins. This process begins with the attachment of a vesicle to a microtubule, and ends when the vesicle reaches its final destination.","definition_xrefs":["GOC:rl","GOC:ecd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle transport along microtubule","termid":"GO:0072384"},{"relation_name":"is_a","term_name":"vesicle cytoskeletal trafficking","termid":"GO:0099518"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00594":null,"SJAG_02651":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"vesicle transport along microtubule","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"microtubule-based vesicle localization","type":"exact"}],"termid":"GO:0047496","terms_by_termid":{"GO:0047496":null}}


id: MONDO:0009747
data:
  {"annotated_genes":["SJAG_01649"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87616],"is_not":false,"summary":null,"term":"MONDO:0009747"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial DNA depletion syndrome, hepatocerebral form","termid":"MONDO:0100512"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01649":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069"],"is_obsolete":false,"name":"mitochondrial DNA depletion syndrome 6 (hepatocerebral type)","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:338045","GARD:3972","MESH:C538344","Orphanet:255229","UMLS:C1850406","DOID:0080125","OMIM:256810"],"synonyms":[{"name":"MPV17-related hepatocerebral mitochondrial DNA depletion syndrome","type":"related"},{"name":"MTDPS6","type":"related"},{"name":"NN","type":"related"},{"name":"Navajo familial neurogenic arthropathy","type":"related"},{"name":"Navajo neurohepatopathy","type":"exact"},{"name":"Navajo neuropathy","type":"exact"},{"name":"mitochondrial DNA depletion syndrome 6","type":"related"},{"name":"mitochondrial DNA depletion syndrome 6 (hepatocerebral type)","type":"exact"}],"termid":"MONDO:0009747","terms_by_termid":{"MONDO:0009747":null},"xrefs":{"Monarch":{"xref_id":"0009747"}}}


id: MONDO:0700115
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitreoretinal membrane shrinkage or contraction secondary to the proliferation of primarily retinal pigment epithelial cells and glial cells, particularly fibrous astrocytes, followed by membrane formation. The formation of fibrillar collagen and cellular proliferation appear to be the basis for the contractile properties of the epiretinal and vitreous membranes.","definition_xrefs":["MESH:D018630"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinal disorder","termid":"MONDO:0005283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"proliferative vitreoretinopathy","secondary_identifiers":["UMLS:C0242852","SCTID:232016005","icd11.foundation:1908429642","MEDGEN:66167"],"termid":"MONDO:0700115","xrefs":{"Monarch":{"xref_id":"0700115"}}}


id: PBO:0034140
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_1_to_many_homology_relationship_with","termid":"PBO:0034140"}


id: PATO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality of a process which ends earlier than the natural end time or reference process.","definition_xrefs":["PATOC:LC"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased occurrence","termid":"PATO:0002052"},{"relation_name":"is_a","term_name":"offset quality","termid":"PATO:0002324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arrested","secondary_identifiers":["PATO:0001508"],"synonyms":[{"name":"abolished","type":"exact"},{"name":"incomplete","type":"related"}],"termid":"PATO:0000297"}


id: MONDO:0030534
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadotropic hypogonadism","termid":"MONDO:0018555"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism 26 with or without anosmia","secondary_identifiers":["UMLS:C5676903","MEDGEN:1811919","OMIM:619718"],"synonyms":[{"name":"HH26","type":"exact"}],"termid":"MONDO:0030534","xrefs":{"Monarch":{"xref_id":"0030534"}}}


id: GO:0045248
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cytosolic complex of multiple copies of three enzymatic components: oxoglutarate dehydrogenase (lipoamide) (E1), dihydrolipoamide S-succinyltransferase (E2) and dihydrolipoamide dehydrogenase (E3); catalyzes the overall conversion of 2-oxoglutarate to succinyl-CoA and carbon dioxide (CO2).","definition_xrefs":["GOC:mtg_sensu","PMID:10848975"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic oxoglutarate dehydrogenase complex (obsolete GO:0045248)","termid":"GO:0045248"}


id: PBO:0059036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MMP24 opposite strand","termid":"PBO:0059036"}


id: GO:0140343
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Removes phosphatidylserine from the outer leaflet of a donor membrane, transports it through the aqueous phase while protected in a hydrophobic pocket, and brings it to the outer leaflet of an acceptor membrane.","definition_xrefs":["PMID:26206935"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transfer activity","termid":"GO:0120014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0120013"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0120013"],"is_obsolete":false,"name":"phosphatidylserine transfer activity","synonyms":[{"name":"intermembrane phosphatidylserine carrier activity","type":"narrow"}],"termid":"GO:0140343"}


id: PBO:0001453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenylate kinase Adk1","termid":"PBO:0001453"}


id: GO:0097082
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a vascular smooth muscle cell in an environment that is neutral with respect to the developmental pathway. Upon specification, the cell fate can be reversed. A vascular smooth muscle cell is a non-striated, elongated, spindle-shaped cell found lining the blood vessels.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle cell fate specification","termid":"GO:0042694"},{"relation_name":"part_of","term_name":"vascular associated smooth muscle cell fate commitment","termid":"GO:0097081"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vascular associated smooth muscle cell fate specification","synonyms":[{"name":"vascular smooth muscle cell fate specification","type":"exact"}],"termid":"GO:0097082"}


id: PBO:0049898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERPUD family member 2","termid":"PBO:0049898"}


id: MONDO:0019206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete sparse hair-short stature-skin anomalies syndrome (obsolete MONDO:0019206)","termid":"MONDO:0019206","xrefs":{"Monarch":{"xref_id":"0019206"}}}


id: PBO:0075246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin 16","termid":"PBO:0075246"}


id: GO:0072389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of flavin adenine dinucleotide, which acts as a coenzyme or prosthetic group of various flavoprotein oxidoreductase enzymes.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide catabolic process","termid":"GO:0009166"},{"relation_name":"is_a","term_name":"flavin-containing compound catabolic process","termid":"GO:0042728"},{"relation_name":"is_a","term_name":"flavin adenine dinucleotide metabolic process","termid":"GO:0072387"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"flavin adenine dinucleotide catabolic process","synonyms":[{"name":"FAD or FADH2 catabolic process","type":"exact"},{"name":"flavin adenine dinucleotide breakdown","type":"exact"},{"name":"flavin adenine dinucleotide catabolism","type":"exact"},{"name":"flavin adenine dinucleotide degradation","type":"exact"}],"termid":"GO:0072389"}


id: PBO:0005869
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mating-type m-specific polypeptide Mi","termid":"PBO:0005869"}


id: GO:0032751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-27 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-27 production","termid":"GO:0032671"},{"relation_name":"positively_regulates","term_name":"interleukin-27 production","termid":"GO:0032631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-27 production","secondary_identifiers":["GO:0045539"],"synonyms":[{"name":"activation of interleukin-27 production","type":"narrow"},{"name":"positive regulation of IL-27 production","type":"exact"},{"name":"positive regulation of interleukin-27 anabolism","type":"narrow"},{"name":"positive regulation of interleukin-27 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-27 production","type":"narrow"},{"name":"up regulation of interleukin-27 production","type":"exact"},{"name":"up-regulation of interleukin-27 production","type":"exact"},{"name":"upregulation of interleukin-27 production","type":"exact"}],"termid":"GO:0032751"}


id: PBO:0064566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POP1 homolog, ribonuclease P/MRP subunit","termid":"PBO:0064566"}


id: GO:0052575
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a carbohydrate is transported to, or maintained in, a specific location. Carbohydrates are any of a group of organic compounds based of the general formula Cx(H2O)y.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule localization","termid":"GO:0033036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"carbohydrate localization","synonyms":[{"name":"carbohydrate localisation","type":"exact"}],"termid":"GO:0052575"}


id: MONDO:0014446
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Bardet-Biedl syndrome in which the cause of the disease is a mutation in the BBIP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bardet-Biedl syndrome","termid":"MONDO:0015229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Bardet-Biedl syndrome 18","secondary_identifiers":["UMLS:C3806174","DOID:0110140","GARD:16042","OMIM:615995","MEDGEN:812504"],"synonyms":[{"name":"BBIP1 Bardet-Biedl syndrome","type":"exact"},{"name":"BBS18","type":"exact"},{"name":"Bardet-Biedl syndrome 18","type":"exact"},{"name":"Bardet-Biedl syndrome caused by mutation in BBIP1","type":"exact"},{"name":"Bardet-Biedl syndrome type 18","type":"exact"}],"termid":"MONDO:0014446","xrefs":{"Monarch":{"xref_id":"0014446"}}}


id: PBO:0041986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 28B","termid":"PBO:0041986"}


id: GO:0035823
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A gene conversion process in which a segment of about 50-200 base pairs is transferred from the donor to the acceptor.","definition_xrefs":["PMID:16954385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene conversion","termid":"GO:0035822"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"short tract gene conversion","termid":"GO:0035823"}


id: PBO:0051327
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 2-18 (pseudogene)","termid":"PBO:0051327"}


id: GO:2000722
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac vascular smooth muscle cell differentiation.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of vascular associated smooth muscle cell differentiation","termid":"GO:1905063"},{"relation_name":"is_a","term_name":"regulation of cardiocyte differentiation","termid":"GO:1905207"},{"relation_name":"regulates","term_name":"cardiac vascular smooth muscle cell differentiation","termid":"GO:0060947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac vascular smooth muscle cell differentiation","synonyms":[{"name":"regulation of heart vascular smooth muscle cell differentiation","type":"exact"}],"termid":"GO:2000722"}


id: GO:0002932
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a tendon sheath over time, from its formation to the mature structure. A tendon sheath is a layer of membrane around a tendon. It permits the tendon to move.","definition_xrefs":["PMID:20696843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"part_of","term_name":"tendon development","termid":"GO:0035989"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tendon sheath development","termid":"GO:0002932"}


id: GO:0070959
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a fungal cell by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of fungus","termid":"GO:0070953"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of symbiont cell","termid":"GO:0070955"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of fungus","termid":"GO:0070947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of fungus","synonyms":[{"name":"down regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"downregulation of neutrophil mediated killing of fungus","type":"exact"},{"name":"inhibition of neutrophil mediated killing of fungus","type":"narrow"}],"termid":"GO:0070959"}


id: GO:0045195
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of gallstones, hard, crystal-like accretions of cholesterol and bile pigments which develop when bile contains too much cholesterol and not enough bile.","gene_count":0,"genotype_count":0,"name":"obsolete gallstone formation (obsolete GO:0045195)","synonyms":[{"name":"gallstone formation","type":"exact"}],"termid":"GO:0045195"}


id: MONDO:0100228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any muscular dystrophy in which the cause of the disease is a mutation in the LAMA2 gene.","definition_xrefs":["PMID:30055037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscular dystrophy","termid":"MONDO:0020121"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"LAMA2-related muscular dystrophy","secondary_identifiers":["UMLS:C5679788","MEDGEN:1826054"],"synonyms":[{"name":"LAMA2-related muscular dystrophy","type":"exact"}],"termid":"MONDO:0100228","xrefs":{"Monarch":{"xref_id":"0100228"}}}


id: FYPO:0006437
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which the mitotic DNA damage checkpoint is normal (i.e. indistinguishable from wild type) when the cell is exposed to methyl methanesulfonate. The S phase DNA damage checkpoint slows progression through S phase in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic DNA damage checkpoint","termid":"FYPO:0001705"},{"relation_name":"is_a","term_name":"normal mitotic cell cycle regulation during cellular response to methyl methanesulfonate","termid":"FYPO:0005373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000298","FYPO:0000257","FYPO:0001312","FYPO:0000631"],"is_obsolete":false,"name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate","synonyms":[{"name":"normal mitotic DNA damage checkpoint activation during cellular response to methyl methanesulfonate","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to MMS","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate during mitotic cell cycle","type":"exact"},{"name":"normal mitotic DNA damage checkpoint during cellular response to methyl methanesulfonate during vegetative growth","type":"exact"}],"termid":"FYPO:0006437"}


id: GO:0021941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that stops, prevents or reduces the rate or extent of granule cell precursor proliferation.","definition_xrefs":["GOC:cls","GOC:jid","GOC:dph","GOC:dgh","PMID:15157725","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cerebellar granule cell precursor proliferation","termid":"GO:0021936"},{"relation_name":"is_a","term_name":"negative regulation of neural precursor cell proliferation","termid":"GO:2000178"},{"relation_name":"negatively_regulates","term_name":"cerebellar granule cell precursor proliferation","termid":"GO:0021930"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cerebellar granule cell precursor proliferation","synonyms":[{"name":"down regulation of granule cell precursor proliferation","type":"exact"},{"name":"down-regulation of granule cell precursor proliferation","type":"exact"},{"name":"downregulation of granule cell precursor proliferation","type":"exact"},{"name":"inhibition of granule cell precursor proliferation","type":"narrow"}],"termid":"GO:0021941"}


id: MONDO:0013122
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary congenital glaucoma","termid":"MONDO:0000365"},{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"glaucoma 3, primary congenital, D","secondary_identifiers":["GARD:18226","MESH:C567765","UMLS:C2751316","MEDGEN:416524","OMIM:613086"],"synonyms":[{"name":"GLC3D","type":"related"},{"name":"glaucoma 3, primary congenital, D","type":"exact"},{"name":"glaucoma 3, primary congenital, type D","type":"exact"}],"termid":"MONDO:0013122","xrefs":{"Monarch":{"xref_id":"0013122"}}}


id: PBO:0061959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 15 pseudogene","termid":"PBO:0061959"}


id: MONDO:0800046
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, genetic congenital hypothyroidism disorder characterized by mild global developmental delay in childhood, short stature, delayed bone age, and abnormal thyroid and selenium levels in serum (high total and free T4 concentrations, low T3, high reverse T3, normal to high TSH, decreased selenium). Intellectual disability, primary infertility, hypotonia, muscle weakness, and impaired hearing have also been reported.","definition_xrefs":["Orphanet:171706"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral hypothyroidism","termid":"MONDO:0016412"},{"relation_name":"is_a","term_name":"thyroid hormone metabolism, abnormal","termid":"MONDO:0031432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thyroid hormone metabolism, abnormal 1","secondary_identifiers":["OMIM:609698","MEDGEN:1801974","UMLS:C5676891","MESH:C566454","GARD:17068"],"synonyms":[{"name":"THMA1","type":"exact"},{"name":"short stature-delayed bone age due to thyroid hormone metabolism deficiency","type":"exact"},{"name":"thyroid hormone metabolism, abnormal","type":"broad"}],"termid":"MONDO:0800046","xrefs":{"Monarch":{"xref_id":"0800046"}}}


id: PBO:0045909
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB6 antisense RNA 1","termid":"PBO:0045909"}


id: PBO:0042640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 15 pseudogene","termid":"PBO:0042640"}


id: MOD:00138
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue into 2-oxobutanoic acid.","definition_xrefs":["PubMed:15023056","PubMed:2764678","RESID:AA0129","ChEBI:149508","PubMed:1680314","PubMed:2253617","Unimod:385#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-threonine residue","termid":"MOD:00917"},{"relation_name":"is_a","term_name":"deaminated residue","termid":"MOD:01160"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxobutanoic acid","synonyms":[{"name":"2-ketobutyric acid","type":"exact"},{"name":"2-oxobutanoic acid","type":"exact"},{"name":"2-oxobutyric acid","type":"exact"},{"name":"Ammonia-loss","type":"related"},{"name":"Loss of ammonia","type":"related"},{"name":"MOD_RES 2-oxobutanoic acid","type":"exact"}],"termid":"MOD:00138"}


id: MONDO:0002658
data:
  {"annotated_genes":["SJAG_03677"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014937"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the iris.","direct_ancestors":[{"relation_name":"is_a","term_name":"uveal cancer","termid":"MONDO:0002659"},{"relation_name":"is_a","term_name":"iris neoplasm","termid":"MONDO:0021224"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03677":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"iris cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C4554","UMLS:C0346372","DOID:3478","SCTID:188264002","MEDGEN:91103"],"synonyms":[{"name":"cancer of iris","type":"exact"},{"name":"iris cancer","type":"exact"},{"name":"malignant iris neoplasm","type":"exact"},{"name":"malignant iris tumor","type":"exact"},{"name":"malignant iris tumour","type":"exact"},{"name":"malignant neoplasm of iris","type":"exact"},{"name":"malignant neoplasm of the iris","type":"exact"},{"name":"malignant tumor of iris","type":"exact"},{"name":"malignant tumor of the iris","type":"exact"},{"name":"malignant tumour of iris","type":"exact"},{"name":"malignant tumour of the iris","type":"exact"},{"name":"tumor of the iris","type":"broad"},{"name":"tumour of the iris","type":"broad"}],"termid":"MONDO:0002658","terms_by_termid":{"MONDO:0014937":null},"xrefs":{"Monarch":{"xref_id":"0002658"}}}


id: MONDO:0001712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A receptive visual aphasia characterized by the loss of a previously possessed ability to comprehend the meaning or significance of handwritten words, despite intact vision. This condition may be associated with posterior cerebral artery infarction (infarction, posterior cerebral artery) and other brain diseases.","definition_xrefs":["MESH:D004411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visual agnosia","termid":"MONDO:0000685"},{"relation_name":"is_a","term_name":"reading disorder","termid":"MONDO:0001697"},{"relation_name":"is_a","term_name":"cognitive disorder","termid":"MONDO:0002039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"alexia","secondary_identifiers":["icd11.foundation:262295178","MEDGEN:1809","DOID:13417","UMLS:C0002018","ICD9:315.01"],"synonyms":[{"name":"Blindnesses, acquired Word","type":"related"},{"name":"Word Blindnesses, acquired","type":"related"},{"name":"Word blindness, acquired","type":"related"},{"name":"acquired Word Blindnesses","type":"related"},{"name":"acquired Word blindness","type":"related"},{"name":"acquired alexia","type":"related"},{"name":"acquired dyslexia","type":"related"},{"name":"acquired global dyslexia","type":"related"},{"name":"acquired reading disabilities","type":"related"},{"name":"acquired reading disability","type":"related"},{"name":"acquired spelling dyslexia","type":"related"},{"name":"alexia, acquired","type":"related"},{"name":"aphemesthaesia","type":"exact"},{"name":"blindness, acquired Word","type":"related"},{"name":"disabilities, acquired reading","type":"related"},{"name":"disability, acquired reading","type":"related"},{"name":"dyslexia, acquired global","type":"related"},{"name":"dyslexia, acquired spelling","type":"related"},{"name":"global dyslexia, acquired","type":"related"},{"name":"reading disabilities, acquired","type":"related"},{"name":"reading disability, acquired","type":"related"},{"name":"spelling dyslexia, acquired","type":"related"}],"termid":"MONDO:0001712","xrefs":{"Monarch":{"xref_id":"0001712"}}}


id: PBO:0054922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2336","termid":"PBO:0054922"}


id: GO:0150036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission.","definition_xrefs":["PMID:27296803","GOC:aruk","GOC:bc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modulation of chemical synaptic transmission","termid":"GO:0050804"},{"relation_name":"regulates","term_name":"trans-synaptic signaling by endocannabinoid, modulating synaptic transmission","termid":"GO:0099553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of trans-synaptic signaling by endocannabinoid, modulating synaptic transmission","termid":"GO:0150036"}


id: PBO:0083580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; substantially overlaps YMR295C; deletion causes sensitivity to unfolded protein response-inducing agents","termid":"PBO:0083580"}


id: PBO:0065972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAD52 pseudogene 1","termid":"PBO:0065972"}


id: PR:O74971
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An autophagy protein 5 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13040:SF2","PRO:DNx","OMA:SCHPO03703"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4B4.10c","secondary_identifiers":["UniProtKB:O74971"],"synonyms":[{"name":"Spom972h-ATG5","type":"exact"},{"name":"meiotically up-regulated gene 77 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74971"}


id: MONDO:0024620
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"infectious meningitis","termid":"MONDO:0004796"},{"relation_name":"is_a","term_name":"viral infection of central nervous system","termid":"MONDO:0024318"},{"relation_name":"is_a","term_name":"poliovirus infection","termid":"MONDO:0024618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningitis caused by poliovirus","secondary_identifiers":["MEDGEN:928803","SCTID:721765009","UMLS:C4303134"],"synonyms":[{"name":"meningitis caused by human poliovirus","type":"exact"},{"name":"polio virus meningitis","type":"related"}],"termid":"MONDO:0024620","xrefs":{"Monarch":{"xref_id":"0024620"}}}


id: PBO:0002745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein, human ZNF593 ortholog","termid":"PBO:0002745"}


id: MONDO:0018686
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An instance of Creutzfeldt Jacob disease that is acquired during the lifetime of the individual.","definition_xrefs":["MONDO:patterns/acquired"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"encephalopathy, bovine spongiform","termid":"MONDO:0025149"},{"relation_name":"is_a","term_name":"Creutzfeldt Jacob disease","termid":"MONDO:0005357"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired Creutzfeldt-Jakob disease","secondary_identifiers":["MESH:C538481","Orphanet:454700","NANDO:1200192","MEDGEN:1826177","UMLS:C5681100","MONDO:0025169","GARD:17788"],"synonyms":[{"name":"acquired CJD","type":"exact"},{"name":"acquired Creutzfeldt Jacob disease","type":"exact"},{"name":"sporadic CJD","type":"related"}],"termid":"MONDO:0018686","xrefs":{"Monarch":{"xref_id":"0018686"}}}


id: FYPO:0007759
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which cohesion between sister chromatids lasts longer than normal in centromeric regions, continuing into anaphase of the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:33888556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiotic sister chromatid cohesion","termid":"FYPO:0002092"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000641"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000002","FYPO:0000631","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased duration of meiotic sister chromatid cohesion at centromere during meiosis I","synonyms":[{"name":"ectopic meiotic sister chromatid cohesion at centromere during meiosis I","type":"related"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase I","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during anaphase of meiosis I","type":"narrow"},{"name":"increased duration of meiotic sister chromatid cohesion at centromere during first meiotic nuclear division","type":"exact"},{"name":"increased duration of meiotic sister chromatid cohesion, centromeric, during meiosis I","type":"exact"},{"name":"increased duration of sister chromatid cohesion at centromere during meiosis I","type":"exact"},{"name":"prolonged meiotic sister chromatid cohesion at centromere during meiosis I","type":"exact"}],"termid":"FYPO:0007759"}


id: MOD:01395
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results from forming an adduct between an isoleucine residue, a threonine residue and the quinaldate compound 2-carboxy-4-(1-hydroxyethyl)--7,8-dihydroquinolin-8-ol.","definition_xrefs":["RESID:AA0472","PubMed:11320328"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quinaldate modified residue","termid":"MOD:01424"},{"relation_name":"is_a","term_name":"crosslinked L-isoleucine residue","termid":"MOD:02049"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4-(1-hydroxyethyl)-7-isoleucino-2-(threonin-O3-ylcarbonyl)-7,8-dihydroquinolin-8-ol","synonyms":[{"name":"(7R,8S)-7-[(1S,2S)-1-carboxy-2-methylbutyl]amino-2-([(1S,2R)-1-amino-1-carboxypropan-2-yl]oxy)carbonyl-8-hydroxy-4-[(1S)-1-hydroxyethyl]-7,8-dihydroquinoline","type":"exact"},{"name":"4-(1-hydroxyethyl)-7-isoleucino-2-(threonin-O3-ylcarbonyl)-7,8-dihydroquinolin-8-ol","type":"exact"},{"name":"BINDING 4-(1-hydroxyethyl)-7,8-dihydroquinolin-8-ol (covalent; via 2 links)","type":"exact"}],"termid":"MOD:01395"}


id: PBO:0070024
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1321, pseudogene","termid":"PBO:0070024"}


id: PBO:0069624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 901, pseudogene","termid":"PBO:0069624"}


id: PBO:0004090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-glucose 4-epimerase Uge1","termid":"PBO:0004090"}


id: PBO:0013811
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by G. gallus cdc2","termid":"PBO:0013811"}


id: PBO:0079190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis specific protein Y-linked 19, pseudogene","termid":"PBO:0079190"}


id: PBO:0052889
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 9-12, pseudogene","termid":"PBO:0052889"}


id: PR:O74559
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A surfeit locus protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23427:SF1","OMA:SCHPO04340"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfeit locus protein 4 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC970.06","secondary_identifiers":["UniProtKB:O74559"],"synonyms":[{"name":"Spom972h-SURF4","type":"exact"}],"termid":"PR:O74559"}


id: PBO:0120122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lysophosphatidylethanolamine acyltransferase that regulates phospholipid composition; involved in remodeling membrane phospholipid acyl chains; TRAM–LAG1–CLN8 domain-containing (TLCD) protein family member; homolog of human TLCD1; distant similarity to yeast ceramide synthases, Lag1p and Lac1p; mutation confers sensitivity to inhibitors of sphingolipid biosynthesis","termid":"PBO:0120122"}


id: MONDO:0024240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An adenocarcinoma with eccrine differentiation arising from the sweat glands. It includes the following subtypes: ductal eccrine adenocarcinoma, papillary eccrine carcinoma, and eccrine porocarcinoma.","definition_xrefs":["NCIT:C27255"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eccrine sweat gland cancer","termid":"MONDO:0005506"},{"relation_name":"is_a","term_name":"sweat gland carcinoma","termid":"MONDO:0005524"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"eccrine carcinoma","secondary_identifiers":["UMLS:C1302864","MEDGEN:724404","SCTID:400173004","DOID:4920","ICDO:8413/3"],"synonyms":[{"name":"carcinoma of eccrine sweat gland","type":"exact"},{"name":"carcinoma, eccrine gland, malignant","type":"exact"},{"name":"eccrine adenocarcinoma","type":"exact"},{"name":"eccrine adenocarcinoma (morphologic abnormality)","type":"exact"},{"name":"eccrine carcinoma","type":"exact"},{"name":"eccrine carcinoma of skin","type":"exact"},{"name":"eccrine sweat gland adenocarcinoma","type":"exact"},{"name":"eccrine sweat gland carcinoma","type":"exact"}],"termid":"MONDO:0024240","xrefs":{"Monarch":{"xref_id":"0024240"}}}


id: PBO:0053547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 554","termid":"PBO:0053547"}


id: MONDO:0022311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Crouzon syndrome","termid":"MONDO:0007405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"cote katsantoni syndrome","secondary_identifiers":["UMLS:C2931195","MEDGEN:419356","GARD:1554","MESH:C536449"],"synonyms":[{"name":"ectodermal dysplasia osteosclerosis","type":"related"}],"termid":"MONDO:0022311","xrefs":{"Monarch":{"xref_id":"0022311"}}}


id: PBO:0063111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PARM1 antisense RNA 1","termid":"PBO:0063111"}


id: PBO:0067906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 208","termid":"PBO:0067906"}


id: GO:0035659
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of Wnt protein to a frizzled family receptor on the surface of a target cell in the epidermis that contributes to the migration of an epidermal cell along or through a wound gap to reestablish a continuous epidermis.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete Wnt signaling pathway involved in wound healing, spreading of epidermal cells (obsolete GO:0035659)","synonyms":[{"name":"Wnt receptor signaling pathway involved in wound healing, spreading of epidermal cells","type":"exact"},{"name":"Wnt receptor signalling pathway involved in wound healing, spreading of epidermal cells","type":"exact"},{"name":"Wnt-activated signaling pathway involved in wound healing, spreading of epidermal cells","type":"exact"}],"termid":"GO:0035659"}


id: PBO:0088154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Very long chain fatty acyl-CoA synthetase and fatty acid transporter; activates imported fatty acids with a preference for very long lengths (C20-C26); has a separate function in the transport of long chain fatty acids","termid":"PBO:0088154"}


id: PBO:0074786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 7","termid":"PBO:0074786"}


id: FYPO:0004562
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell has two nuclei and no septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"has_part","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"},{"relation_name":"is_a","term_name":"aseptate","termid":"FYPO:0000949"},{"relation_name":"is_a","term_name":"binucleate vegetative cell","termid":"FYPO:0001222"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001320","FYPO:0005447","FYPO:0000032","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"binucleate aseptate vegetative cell","synonyms":[{"name":"binucleate aseptate cell during mitotic cell cycle","type":"related"},{"name":"binucleate aseptate cell during vegetative growth","type":"exact"},{"name":"dikaryosis","type":"related"}],"termid":"FYPO:0004562"}


id: PBO:0031779
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_endocytosis_during_vegetative_growth","termid":"PBO:0031779"}


id: MONDO:0015988
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Multicystic dysplastic kidney (MCDK) is a congenital anomaly of the kidney and urinary tract (CAKUT) in which one or both kidneys (unilateral or bilateral MCDK respectively) are large, distended by multiple cysts, and non-functional.","definition_xrefs":["Orphanet:1851"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystic kidney disease","termid":"MONDO:0002473"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"multicystic dysplastic kidney","secondary_identifiers":["SCTID:204962002","MEDGEN:811388","UMLS:C3714581","NANDO:2200158","NCIT:C123031","GARD:18748","ICD9:753.19","MESH:D021782","icd11.foundation:1178642763"],"synonyms":[{"name":"MCDK","type":"exact"},{"name":"multicystic renal dysplasia","type":"exact"}],"termid":"MONDO:0015988","xrefs":{"Monarch":{"xref_id":"0015988"}}}


id: FYECO:0000150
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Calcium ions were completely excluded from the experimental medium/buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping absent","termid":"FYECO:0000120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium absent","termid":"FYECO:0000150"}


id: MONDO:0019945
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Solar urticaria (SU) is a rare and difficult to treat photosensitive disease, in which local skin swelling occurs within minutes of exposure to natural sunlight or even artificial light sources emitting ultraviolet radiation.","definition_xrefs":["Orphanet:97230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"solar urticaria","secondary_identifiers":["GARD:19353","ICD10CM:L56.3","icd11.foundation:64163683","SCTID:10347006","UMLS:C0263610","MedDRA:10041307","ICD9:708.8","MEDGEN:538004"],"termid":"MONDO:0019945","xrefs":{"Monarch":{"xref_id":"0019945"}}}


id: MONDO:0000749
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A breast disease characterized by a collection of pus in the breast.","definition_xrefs":["DOID:0060323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast disorder","termid":"MONDO:0002657"},{"relation_name":"is_a","term_name":"abscess","termid":"MONDO:0005227"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"breast abscess","secondary_identifiers":["UMLS:C0151463","MEDGEN:508760","SCTID:28432003","icd11.foundation:1033306788"],"termid":"MONDO:0000749","xrefs":{"Monarch":{"xref_id":"0000749"}}}


id: GO:0097558
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It is nucleated by the left ventral basal body and exits the cell body proximally and dorsal to the ventral disc.","definition_xrefs":["ISBN:9780124260207","PMID:16607022","GOC:giardia","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"left ventral flagellum","synonyms":[{"name":"left ventral cilium","type":"exact"}],"termid":"GO:0097558"}


id: PBO:0065719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Prader Willi/Angelman region RNA 5","termid":"PBO:0065719"}


id: PBO:0084265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane component of ER-derived COPII-coated vesicles; functions in ER to Golgi transport; EMP46 has a paralog, EMP47, that arose from the whole genome duplication","termid":"PBO:0084265"}


id: PBO:0030464
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromosomal_translocation","termid":"PBO:0030464"}


id: MONDO:0012458
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"excluded_subClassOf","term_name":"essential hypertension, genetic","termid":"MONDO:0007781"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypertension, essential, susceptibility to, 5","secondary_identifiers":["OMIM:610261","UMLS:C1853227","MEDGEN:339933"],"synonyms":[{"name":"Hyt5","type":"related"},{"name":"hypertension, essential, body Mass-related","type":"related"},{"name":"hypertension, essential, susceptibility to, 5","type":"exact"},{"name":"hypertension, essential, susceptibility to, type 5","type":"exact"}],"termid":"MONDO:0012458","xrefs":{"Monarch":{"xref_id":"0012458"}}}


id: PR:000044705
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.3, initiator methionine removed K9-methylated form (Schizosaccharomyces pombe) whose methylation type is trimethylation. Example: UniProtKB:P10651-1, 2-136, Lys-10, MOD:00083.","definition_xrefs":["PMID:23849629","PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hht3/Me(K9)","termid":"PR:000027604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3.3, initiator methionine removed K9-trimethylated form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-/K9me3","type":"exact"}],"termid":"PR:000044705"}


id: GO:0006529
data:
  {"annotated_genes":["SJAG_02832","SJAG_04549"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58091],"is_not":false,"summary":null,"term":"GO:0006529"},{"annotations":[104178],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070981"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of asparagine, 2-amino-3-carbamoylpropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asparagine metabolic process","termid":"GO:0006528"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02832":null,"SJAG_04549":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"asparagine biosynthetic process","references_by_uniquename":{"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"asparagine anabolism","type":"exact"},{"name":"asparagine biosynthesis","type":"exact"},{"name":"asparagine formation","type":"exact"},{"name":"asparagine synthesis","type":"exact"}],"termid":"GO:0006529","terms_by_termid":{"GO:0006529":null,"GO:0070981":null}}


id: MONDO:0006590
data:
  {"annotated_genes":["SJAG_01938","SJAG_01878","SJAG_04565","SJAG_02698","SJAG_02488","SJAG_00104","SJAG_03158","SJAG_05011"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87503],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033014"},{"annotations":[87997],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014131"},{"annotations":[87709,87708],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009440"},{"annotations":[86991],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007858"},{"annotations":[88718,88719,88720],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008416"}]},"cv_name":"mondo","definition":"A group of autosomal dominant, autosomal recessive, X-linked inherited or acquired disorders characterized by the thickening of the palms and soles due to hyperkeratosis.","definition_xrefs":["NCIT:C34748"],"direct_ancestors":[{"relation_name":"is_a","term_name":"keratosis","termid":"MONDO:0006566"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_01878":null,"SJAG_01938":null,"SJAG_02488":null,"SJAG_02698":null,"SJAG_03158":null,"SJAG_04565":null,"SJAG_05011":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"palmoplantar keratosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0022596","EFO:1000745","DOID:3390","ICD9:757.39","SCTID:706885006","MEDGEN:44017"],"synonyms":[{"name":"keratoderma, palmoplantar","type":"related"},{"name":"keratosis palmaris et plantaris","type":"exact"},{"name":"palmoplantar keratoderma","type":"exact"}],"termid":"MONDO:0006590","terms_by_termid":{"MONDO:0007858":null,"MONDO:0008416":null,"MONDO:0009440":null,"MONDO:0014131":null,"MONDO:0033014":null},"xrefs":{"Monarch":{"xref_id":"0006590"}}}


id: GO:0044821
data:
  {"annotated_genes":["SJAG_01777","SJAG_01263","SJAG_03680"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[116045],"is_not":false,"summary":null,"term":"GO:0044821"},{"annotations":[65777,91774],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070197"}]},"cv_name":"biological_process","definition":"The process in which a telomere is maintained in a specific location at the nuclear periphery, as part of a meiotic cell cycle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"telomere tethering at nuclear periphery","termid":"GO:0034398"},{"relation_name":"is_a","term_name":"meiotic telomere clustering","termid":"GO:0045141"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01263":null,"SJAG_01777":null,"SJAG_03680":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049","GO:0051179"],"is_obsolete":false,"name":"meiotic telomere tethering at nuclear periphery","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0044821","terms_by_termid":{"GO:0044821":null,"GO:0070197":null}}


id: GO:0075078
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the host organism modulates the frequency, rate or extent of receptor-mediated signal transduction in the symbiont. The receptor is defined as a protein on the cell membrane or within the cytoplasm or cell nucleus that binds to a specific molecule (a ligand) such as a neurotransmitter or a hormone or other substance, and initiates the cellular response to the ligand. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by host of symbiont receptor-mediated signal transduction (obsolete GO:0075078)","termid":"GO:0075078"}


id: MONDO:0009233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fibulo-ulnar hypoplasia-renal anomalies syndrome is characterized by fibuloulnar dysostosis with renal anomalies. It has been described in two sibs born to nonconsanguinous parents. The syndrome is lethal at birth (respiratory failure). Clinical manifestations include ear and facial anomalies (including micrognathia), symmetrical shortness of long bones, fibular agenesis and hypoplastic ulna, oligosyndactyly, congenital heart defects, and cystic or hypoplastic kidney. It is transmitted as an autosomal recessive trait.","definition_xrefs":["Orphanet:2256"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fibulo-ulnar hypoplasia-renal anomalies syndrome","secondary_identifiers":["OMIM:228940","UMLS:C1856727","MESH:C537226","SCTID:716094008","MEDGEN:383972","GARD:320"],"synonyms":[{"name":"FIBULOULNAR aplasia or hypoplasia with renal abnormalities","type":"related"},{"name":"Fibulo ulnar hypoplasia renal anomalies","type":"related"},{"name":"Saito Kuba Tsuruta syndrome","type":"related"},{"name":"Saito-Kuba-Tsuruta syndrome","type":"exact"}],"termid":"MONDO:0009233","xrefs":{"Monarch":{"xref_id":"0009233"}}}


id: PBO:0082506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Catalytic subunit of mitochondrial inner membrane peptidase complex; required for maturation of mitochondrial proteins of the intermembrane space; complex contains two catalytic subunits (Imp1p and Imp2p that differ in substrate specificty) and Som1p","termid":"PBO:0082506"}


id: PBO:0046787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enhancer of zeste 2 polycomb repressive complex 2 subunit","termid":"PBO:0046787"}


id: PBO:0121037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C18orf32 pseudogene 4","termid":"PBO:0121037"}


id: GO:0062037
data:
  {"annotated_genes":["SJAG_04671"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[101379],"is_not":false,"summary":null,"term":"GO:0062037"}]},"cv_name":"molecular_function","definition":"Binding to a DNA D-loop. A D-loop is a three-stranded DNA structure formed by the invasion of a single DNA strand that base pairs with one strand of duplex DNA, while the rest of the double-stranded DNA does not unwind.","definition_xrefs":["PMID:20924116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA secondary structure binding","termid":"GO:0000217"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"D-loop DNA binding","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"DNA displacement loop binding","type":"exact"}],"termid":"GO:0062037","terms_by_termid":{"GO:0062037":null}}


id: GO:1900124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of nodal receptor complex assembly.","definition_xrefs":["GOC:TermGenie","GOC:signaling","PMID:15062104"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of nodal receptor complex assembly","termid":"GO:1900123"},{"relation_name":"negatively_regulates","term_name":"nodal receptor complex assembly","termid":"GO:0038099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of nodal receptor complex assembly","synonyms":[{"name":"down regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"down regulation of nodal receptor complex assembly","type":"exact"},{"name":"down regulation of nodal receptor complex formation","type":"exact"},{"name":"down-regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"down-regulation of nodal receptor complex assembly","type":"exact"},{"name":"down-regulation of nodal receptor complex formation","type":"exact"},{"name":"downregulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"downregulation of nodal receptor complex assembly","type":"exact"},{"name":"downregulation of nodal receptor complex formation","type":"exact"},{"name":"inhibition of ActRIIB.ALK4.EGF-CFC complex formation","type":"narrow"},{"name":"inhibition of nodal receptor complex assembly","type":"narrow"},{"name":"inhibition of nodal receptor complex formation","type":"narrow"},{"name":"negative regulation of ActRIIB.ALK4.EGF-CFC complex formation","type":"exact"},{"name":"negative regulation of nodal receptor complex formation","type":"exact"}],"termid":"GO:1900124"}


id: MONDO:0017353
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neonatal glycine encephalopathy is a frequent, usually severe form of glycine encephalopathy (GE) characterized by coma, apnea, hypotonia, seizure and myoclonic jerks in the neonatal period, and subsequent developmental delay.","definition_xrefs":["Orphanet:289857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine encephalopathy","termid":"MONDO:0011612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"neonatal glycine encephalopathy","secondary_identifiers":["GARD:17332","MEDGEN:1785446","NANDO:1200985","icd11.foundation:414151121","UMLS:C5548200"],"synonyms":[{"name":"classic glycine encephalopathy","type":"exact"},{"name":"neonatal NKH","type":"exact"},{"name":"neonatal non-ketotic hyperglycinemia","type":"exact"}],"termid":"MONDO:0017353","xrefs":{"Monarch":{"xref_id":"0017353"}}}


id: PBO:0052215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily S member 2","termid":"PBO:0052215"}


id: PBO:0061617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nudix hydrolase 3","termid":"PBO:0061617"}


id: GO:0080084
data:
  {"annotated_genes":["SJAG_03354"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[71763],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001002"}]},"cv_name":"molecular_function","definition":"Binding to a 5S rDNA sequence, encoding ribosomal 5S rRNA, which is individually transcribed by RNA polymerase III, rather than by RNA polymerase I, in species where it exists.","definition_xrefs":["PMID:12711688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rDNA binding","termid":"GO:0000182"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03354":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"5S rDNA binding","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0080084","terms_by_termid":{"GO:0001002":null}}


id: MONDO:0037746
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from the vagina and is characterized by the presence of an epithelial and a mesenchymal component. This category includes adenosarcoma, carcinosarcoma, and malignant mixed tumor resembling synovial sarcoma.","definition_xrefs":["NCIT:C40276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vaginal cancer","termid":"MONDO:0001402"},{"relation_name":"is_a","term_name":"malignant mixed neoplasm","termid":"MONDO:0005853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant vaginal mixed epithelial and mesenchymal neoplasm","secondary_identifiers":["MEDGEN:307683","UMLS:C1512974"],"synonyms":[{"name":"malignant vaginal mixed epithelial and mesenchymal neoplasm","type":"exact"},{"name":"malignant vaginal mixed epithelial and mesenchymal tumor","type":"exact"},{"name":"malignant vaginal mixed epithelial and mesenchymal tumour","type":"exact"}],"termid":"MONDO:0037746","xrefs":{"Monarch":{"xref_id":"0037746"}}}


id: GO:0035367
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of thymine, 5-methyluracil, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:sl","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nucleobase-containing compound transport","termid":"GO:0032241"},{"relation_name":"is_a","term_name":"regulation of thymine transport","termid":"GO:0035365"},{"relation_name":"positively_regulates","term_name":"thymine transport","termid":"GO:0035364"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"positive regulation of thymine transport","synonyms":[{"name":"positive regulation of 5-methyluracil transport","type":"exact"}],"termid":"GO:0035367"}


id: MONDO:0014004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral striopallidodentate calcinosis","termid":"MONDO:0008947"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal ganglia calcification, idiopathic, 4","secondary_identifiers":["GARD:15893","UMLS:C3554321","MEDGEN:767235","OMIM:615007"],"synonyms":[{"name":"IBGC4","type":"related"},{"name":"basal ganglia calcification, idiopathic, 4","type":"exact"},{"name":"basal ganglia calcification, idiopathic, type 4","type":"exact"}],"termid":"MONDO:0014004","xrefs":{"Monarch":{"xref_id":"0014004"}}}


id: GO:0009740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals mediated by the detection of gibberellic acid.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gibberellin mediated signaling pathway","termid":"GO:0010476"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"gibberellic acid mediated signaling pathway","synonyms":[{"name":"GA-signaling","type":"exact"},{"name":"gibberellic acid mediated signalling","type":"exact"},{"name":"gibberellic acid signaling","type":"exact"}],"termid":"GO:0009740"}


id: PBO:0053285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA inflammatory and mucous response associated, antisense to ICAM1","termid":"PBO:0053285"}


id: PBO:0077725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNRC6B divergent transcript","termid":"PBO:0077725"}


id: FYPO:0008176
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromere inner repeat region are present at greater levels than normal.","direct_ancestors":[{"relation_name":"is_a","term_name":"increased centromeric transcript level","termid":"FYPO:0004982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased centromeric inner repeat transcript level","termid":"FYPO:0008176"}


id: PBO:0068828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 66, pseudogene","termid":"PBO:0068828"}


id: GO:2000099
data:
  {"annotated_genes":["SJAG_03581","SJAG_03048","SJAG_04461","SJAG_00661","SJAG_00845","SJAG_03637","SJAG_01799","SJAG_00596","SJAG_02022","SJAG_00333","SJAG_00236"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104405],"is_not":false,"summary":null,"term":"GO:2000099"},{"annotations":[107383,95752,102200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[105715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"},{"annotations":[106555,97672,93151,96595,115103,120870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of bipolar cell polarity.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"regulates","term_name":"establishment or maintenance of bipolar cell polarity","termid":"GO:0061245"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_03048":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007163"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment or maintenance of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000099","terms_by_termid":{"GO:0061361":null,"GO:2000099":null,"GO:2000100":null,"GO:2000247":null}}


id: PBO:0048207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gamma-aminobutyric acid type A receptor subunit epsilon","termid":"PBO:0048207"}


id: MONDO:0019177
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A leukodystrophy characterized by progressive ataxia beginning during infancy, a pyramidal syndrome and dental agenesis. The syndrome has been described in four children born to consanguineous parents. The mode of transmission is autosomal recessive.","definition_xrefs":["Orphanet:77295"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism","termid":"MONDO:0011897"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"odontoleukodystrophy","secondary_identifiers":["GARD:9632","MEDGEN:502456","SCTID:722064003","UMLS:C3502054"],"synonyms":[{"name":"dentoleukoencephalopathy","type":"exact"},{"name":"leukodystrophy with oligodontia","type":"exact"}],"termid":"MONDO:0019177","xrefs":{"Monarch":{"xref_id":"0019177"}}}


id: MONDO:0005475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by episodes that are preceded by focal neurological symptoms.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"migraine disorder","termid":"MONDO:0005277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"migraine with aura","secondary_identifiers":["ICD9:346.00","SCTID:4473006","UMLS:C0154723","DOID:10024","ICD9:346.0","MEDGEN:57822","icd11.foundation:525744634","NCIT:C117005","MESH:D020325","HP:0002077","ICD10CM:G43.1"],"synonyms":[{"name":"classic migraine","type":"exact"}],"termid":"MONDO:0005475","xrefs":{"Monarch":{"xref_id":"0005475"}}}


id: PBO:0087616
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the condensin complex; required for establishment and maintenance of chromosome condensation, chromosome segregation, chromatin binding of condensin, tRNA gene clustering at the nucleolus, and silencing at the mating type locus; required for replication slow zone (RSZ) breakage following Mec1p inactivation","termid":"PBO:0087616"}


id: PATO:0002326
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation inhering in a bearer by virtue of the bearer's placement at an angle.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"angle","termid":"PATO:0002326"}


id: MONDO:0013874
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial glucocorticoid deficiency in which the cause of the disease is a mutation in the NNT gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial glucocorticoid deficiency","termid":"MONDO:0008733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucocorticoid deficiency 4","secondary_identifiers":["MEDGEN:766501","GARD:15840","OMIM:614736","NCIT:C131452","UMLS:C3553587"],"synonyms":[{"name":"GCCD4","type":"related"},{"name":"NNT familial glucocorticoid deficiency","type":"exact"},{"name":"familial glucocorticoid deficiency caused by mutation in NNT","type":"exact"},{"name":"glucocorticoid deficiency 4","type":"exact"},{"name":"glucocorticoid deficiency 4 with or without mineralocorticoid deficiency","type":"related"},{"name":"glucocorticoid deficiency 4, with or without mineralocorticoid deficiency","type":"exact"},{"name":"glucocorticoid deficiency type 4","type":"exact"}],"termid":"MONDO:0013874","xrefs":{"Monarch":{"xref_id":"0013874"}}}


id: GO:0044032
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by an organism of the levels of indole acetic acid in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of indole acetic acid levels in host (obsolete GO:0044032)","synonyms":[{"name":"modulation by symbiont of IAA levels in host","type":"exact"},{"name":"modulation by symbiont of auxin levels in host","type":"broad"}],"termid":"GO:0044032"}


id: PR:O94486
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cfh2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94486"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chitin synthase regulatory factor 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC417.05c","synonyms":[{"name":"Chs four homolog 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cfh2","type":"exact"}],"termid":"PR:O94486"}


id: GO:0015284
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: fructose(out) = fructose(in).","definition_xrefs":["TC:2.A.1.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fructose transmembrane transporter activity","termid":"GO:0005353"},{"relation_name":"is_a","term_name":"hexose uniporter activity","termid":"GO:0008516"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"fructose uniporter activity","termid":"GO:0015284"}


id: GO:0033972
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: amidinoproclavaminate + H2O = proclavaminate + urea.","definition_xrefs":["EC:3.5.3.22","RHEA:17001"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidines","termid":"GO:0016813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"proclavaminate amidinohydrolase activity","secondary_identifiers":["KEGG_REACTION:R05357","MetaCyc:3.5.3.22-RXN"],"synonyms":[{"name":"PAH","type":"related"},{"name":"proclavaminate amidino hydrolase activity","type":"related"},{"name":"proclavaminic acid amidino hydrolase activity","type":"related"}],"termid":"GO:0033972"}


id: GO:0003681
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to DNA in a bent conformation.","definition_xrefs":["PMID:12627977","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003677"],"is_obsolete":false,"name":"bent DNA binding","termid":"GO:0003681"}


id: PBO:0001519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain","termid":"PBO:0001519"}


id: PBO:0089681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rpp21","termid":"PBO:0089681"}


id: GO:0019044
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The perpetuation of a latent state, generally by repressing the viruses own lytic genes expression and ensuring expression of viral genes which function to keep the viral genome from being detected by the host defense mechanisms.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"},{"relation_name":"part_of","term_name":"viral latency","termid":"GO:0019042"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"maintenance of viral latency","secondary_identifiers":["GO:0075716","GO:0032360"],"synonyms":[{"name":"latent virus maintenance","type":"exact"},{"name":"prophage maintenance","type":"exact"},{"name":"provirus maintenance","type":"exact"}],"termid":"GO:0019044"}


id: PBO:0080678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"whirlin","termid":"PBO:0080678"}


id: PR:O13690
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- syt22 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O13690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PH and SEC7 domain-containing protein C11E3.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC11E3.11c","synonyms":[{"name":"Spom972h-syt22","type":"exact"}],"termid":"PR:O13690"}


id: GO:1902734
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of receptor-mediated virion attachment to host cell.","definition_xrefs":["GOC:TermGenie","GO_REF:0000058","GOC:als","PMID:18385238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process involved in symbiotic interaction","termid":"GO:0043903"},{"relation_name":"is_a","term_name":"regulation of viral life cycle","termid":"GO:1903900"},{"relation_name":"regulates","term_name":"receptor-mediated virion attachment to host cell","termid":"GO:0046813"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of receptor-mediated virion attachment to host cell","synonyms":[{"name":"regulation of virion attachment, binding of host cell surface receptor","type":"exact"}],"termid":"GO:1902734"}


id: GO:0035230
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A long, thin, polarized cell projection that contains actin and can extend for distances many times the diameter of the cell. Cytonemes represent extensions of cell cytoplasm and typically have a diameter of approximately 0.2um.","definition_xrefs":["PMID:10675901","PMID:10367889"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection","termid":"GO:0120025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cytoneme","secondary_identifiers":["Wikipedia:Membrane_nanotube"],"synonyms":[{"name":"membrane nanotube","type":"exact"}],"termid":"GO:0035230"}


id: GO:0004046
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: an N-acyl-L-amino acid + H2O = a carboxylate + an L-amino acid.","definition_xrefs":["EC:3.5.1.14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"aminoacylase activity","secondary_identifiers":["Reactome:R-HSA-9753944","MetaCyc:AMINOACYLASE-RXN","Reactome:R-HSA-5433074","RHEA:15565","Reactome:R-HSA-5579081","Reactome:R-HSA-9638046"],"synonyms":[{"name":"L-amino-acid acylase activity","type":"related"},{"name":"L-aminoacylase activity","type":"related"},{"name":"N-acyl-L-amino-acid amidohydrolase activity","type":"related"},{"name":"acylase I activity","type":"narrow"},{"name":"alpha-N-acylaminoacid hydrolase activity","type":"related"},{"name":"amido acid deacylase activity","type":"related"},{"name":"aminoacylase I activity","type":"narrow"},{"name":"benzamidase activity","type":"related"},{"name":"dehydropeptidase II activity","type":"narrow"},{"name":"hippurase activity","type":"related"},{"name":"histozyme activity","type":"related"},{"name":"long acyl amidoacylase activity","type":"related"},{"name":"short acyl amidoacylase activity","type":"related"}],"termid":"GO:0004046"}


id: MONDO:0012859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive malignant osteopetrosis in which the cause of the disease is a mutation in the TNFRS11A gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system disorder","termid":"MONDO:0005046"},{"relation_name":"is_a","term_name":"autosomal recessive osteopetrosis","termid":"MONDO:0019026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025","MONDO:0005046"],"is_obsolete":false,"name":"autosomal recessive osteopetrosis 7","secondary_identifiers":["OMIM:612301","GARD:10106","UMLS:C2676766","Orphanet:178389","DOID:0110946","MEDGEN:436770","MESH:C567354"],"synonyms":[{"name":"OPTB7","type":"exact"},{"name":"TNFRSF11A osteopetrosis (disease)","type":"exact"},{"name":"autosomal recessive osteoclast-poor osteopetrosis with hypogammaglobulinemia","type":"exact"},{"name":"autosomal recessive osteopetrosis type 7","type":"exact"},{"name":"osteoclast-poor osteopetrosis with hypogammaglobulinemia","type":"exact"},{"name":"osteopetrosis (disease) caused by mutation in TNFRSF11A","type":"exact"},{"name":"osteopetrosis autosomal recessive 7","type":"related"},{"name":"osteopetrosis osteoclast-poor with hypogammaglobulinemia","type":"related"},{"name":"osteopetrosis, autosomal recessive 7","type":"related"},{"name":"osteopetrosis, autosomal recessive type 7","type":"exact"},{"name":"osteopetrosis, osteoclast-poor, with hypogammaglobulinemia","type":"related"},{"name":"osteopetrosis-hypogammaglobulinemia syndrome","type":"exact"}],"termid":"MONDO:0012859","xrefs":{"Monarch":{"xref_id":"0012859"}}}


id: GO:0031967
data:
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id: GO:0003787
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete actin depolymerizing activity (obsolete GO:0003787)","synonyms":[{"name":"actin depolymerizing activity","type":"exact"}],"termid":"GO:0003787"}


id: MONDO:0000606
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergy involving gluten.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete gluten allergy (obsolete MONDO:0000606)","secondary_identifiers":["DOID:0060057"],"synonyms":[{"name":"allergy of gluten","type":"exact"},{"name":"allergy to gluten","type":"exact"},{"name":"gluten allergic disease","type":"exact"},{"name":"gluten allergic reaction","type":"exact"}],"termid":"MONDO:0000606","xrefs":{"Monarch":{"xref_id":"0000606"}}}


id: PBO:0048317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 28","termid":"PBO:0048317"}


id: FYPO:0007797
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glucan 1,3-alpha-glucosidase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased catalytic activity","termid":"FYPO:0000663"},{"relation_name":"is_a","term_name":"abnormal glucan 1,3-alpha-glucosidase activity","termid":"FYPO:0007796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654"],"is_obsolete":false,"name":"decreased glucan 1,3-alpha-glucosidase activity","synonyms":[{"name":"reduced glucan 1,3-alpha-glucosidase activity","type":"exact"}],"termid":"FYPO:0007797"}


id: PBO:0061037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 3","termid":"PBO:0061037"}


id: PBO:0000726
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclease, XP-G family (predicted)","termid":"PBO:0000726"}


id: PBO:0064421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prepronociceptin","termid":"PBO:0064421"}


id: MONDO:1011624
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Xanthinuria that occurs in domestic cat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xanthinuria, non-human animal","termid":"MONDO:1011450"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xanthinuria, domestic cat","secondary_identifiers":["OMIA:001283-9685"],"termid":"MONDO:1011624","xrefs":{"Monarch":{"xref_id":"1011624"}}}


id: PBO:0068078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 384","termid":"PBO:0068078"}


id: PBO:0073348
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serpin family B member 9","termid":"PBO:0073348"}


id: GO:0000034
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenine + H+ + H2O = hypoxanthine + NH4+.","definition_xrefs":["RHEA:23688"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"adenine deaminase activity","secondary_identifiers":["EC:3.5.4.2","MetaCyc:ADENINE-DEAMINASE-RXN"],"synonyms":[{"name":"ADase activity","type":"related"},{"name":"adenase activity","type":"related"},{"name":"adenine aminase activity","type":"related"},{"name":"adenine aminohydrolase activity","type":"related"}],"termid":"GO:0000034"}


id: PBO:0068093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 400","termid":"PBO:0068093"}


id: GO:0097048
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any apoptotic process in a dendritic cell, a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["CL:0000451","GOC:mtg_apoptosis","PMID:15059845","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte apoptotic process","termid":"GO:0071887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell apoptotic process","synonyms":[{"name":"dendritic cell apoptosis","type":"narrow"}],"termid":"GO:0097048"}


id: PBO:0090492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane anchored protein, claudin family, predicted membrane sensor Mac1","termid":"PBO:0090492"}


id: PBO:0121125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBE2L3 pseudogene 1","termid":"PBO:0121125"}


id: GO:1901834
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of deadenylation-independent decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of mRNA metabolic process","termid":"GO:1903311"},{"relation_name":"regulates","term_name":"deadenylation-independent decapping of nuclear-transcribed mRNA","termid":"GO:0031087"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0008150"],"is_obsolete":false,"name":"regulation of deadenylation-independent decapping of nuclear-transcribed mRNA","synonyms":[{"name":"regulation of deadenylation-independent decapping of nuclear mRNA","type":"related"},{"name":"regulation of deadenylylation-independent decapping","type":"exact"}],"termid":"GO:1901834"}


id: PBO:0044641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decapping enzyme, scavenger","termid":"PBO:0044641"}


id: GO:0005156
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:tb","GOC:mah","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete epidermal growth factor receptor inhibiting ligand activity (obsolete GO:0005156)","synonyms":[{"name":"EGF receptor inhibiting ligand activity","type":"exact"},{"name":"EGFR inhibiting ligand activity","type":"exact"},{"name":"epidermal growth factor receptor inhibiting ligand activity","type":"exact"}],"termid":"GO:0005156"}


id: FYPO:0007547
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A localization phenotype observed in the vegetative growth phase of the life cycle in which nuclear pore localization to the portion of the nuclear envelope enclosing the mitotic nuclear bridge is abnormal, resulting in an abnormal distribution of nuclear pores in the bridge envelope. The nuclear bridge is a narrow constricted region of the nucleus that forms around the mitotic spindle during anaphase. Normally, nuclear pores that lack baskets are found in the midzone of the nuclear bridge.","definition_xrefs":["PomBase:mah","PMID:32502403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal nuclear pore localization during mitosis","termid":"FYPO:0003783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"abnormal nuclear pore localization to mitotic nuclear bridge midzone membrane","synonyms":[{"name":"abnormal NPC localization to mitotic nuclear bridge midzone membrane","type":"exact"},{"name":"abnormal distribution of nuclear pores at nuclear bridge midzone membrane domain","type":"exact"},{"name":"abnormal nuclear pore complex localization to mitotic nuclear bridge midzone membrane","type":"exact"},{"name":"abnormal nuclear pore distribution in mitotic nuclear bridge midzone membrane","type":"exact"},{"name":"abnormal nuclear pore distribution in mitotic nuclear bridge midzone membrane domain","type":"exact"},{"name":"abnormal nuclear pore localization to mitotic nuclear bridge midzone membrane during mitotic cell cycle","type":"related"},{"name":"abnormal nuclear pore localization to mitotic nuclear bridge midzone membrane during vegetative growth","type":"exact"}],"termid":"FYPO:0007547"}


id: PBO:0034070
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-before_or_simultaneous_with","termid":"PBO:0034070"}


id: MONDO:0004121
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete prostate small cell carcinoma (obsolete MONDO:0004121)","termid":"MONDO:0004121","xrefs":{"Monarch":{"xref_id":"0004121"}}}


id: PBO:0004087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein Arp5","termid":"PBO:0004087"}


id: FYPO:0000773
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which pre-replicative complex assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA replication","termid":"FYPO:0000217"},{"relation_name":"is_a","term_name":"abnormal protein-containing complex assembly","termid":"FYPO:0000447"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0000631","FYPO:0001320","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"abnormal pre-replicative complex assembly","synonyms":[{"name":"abnormal pre-RC assembly","type":"exact"},{"name":"abnormal pre-replicative complex assembly during mitotic cell cycle","type":"related"},{"name":"abnormal pre-replicative complex assembly during vegetative growth","type":"exact"},{"name":"abnormal pre-replicative complex formation","type":"exact"}],"termid":"FYPO:0000773"}


id: PBO:0072272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S23 pseudogene 1","termid":"PBO:0072272"}


id: PBO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Brix domain protein Rpf1 (predicted)","termid":"PBO:0001663"}


id: PBO:0027419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_Golgi_apparatus,_with_protein_mislocalized_to_endoplasmic_reticulum","termid":"PBO:0027419"}


id: MONDO:0035500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare primary lymphedema characterized by bilateral, painless lower limb swelling present at birth. Prominent veins around the ankles and on the dorsa of the feet, dysplastic and upslanting toenails due to edema of the nailbed, and subtle dysmorphic facial features (such as high forehead, hypertelorism, depressed nasal bridge, mild bilateral ear dysplasia, and short neck) have also been described. The degree of lymphatic impairment is milder than in the otherwise clinically similar Milroy disease, as evidenced by slightly less severe lymphedema and significantly more uptake of tracers on lymphoscintigraphy.","definition_xrefs":["Orphanet:569821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphatic malformation","termid":"MONDO:0019313"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"congenital primary lymphedema of Gordon","secondary_identifiers":["MEDGEN:1804948","UMLS:C5680138","GARD:22307"],"synonyms":[{"name":"VEGFC-related congenital primary lymphedema","type":"exact"}],"termid":"MONDO:0035500","xrefs":{"Monarch":{"xref_id":"0035500"}}}


id: GO:0004661
data:
  {"annotated_genes":["SJAG_03029","SJAG_03810","SJAG_04923","SJAG_04434"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73224,75897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[75783,80899,103428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent addition of a geranylgeranyl (20-carbon isoprenoid) group via thioether linkages to a cysteine residue at or near the C terminus of a protein.","definition_xrefs":["PMID:8621375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein prenyltransferase activity","termid":"GO:0008318"}],"gene_count":4,"genes_by_uniquename":{"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0003674","GO:0016740","GO:0016765","GO:0003824"],"is_obsolete":false,"name":"protein geranylgeranyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["RHEA:21240","GO:0018224"],"synonyms":[{"name":"protein-cysteine geranylgeranyltransferase activity","type":"exact"}],"termid":"GO:0004661","terms_by_termid":{"GO:0004662":null,"GO:0004663":null}}


id: PBO:0049076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 107","termid":"PBO:0049076"}


id: GO:0032890
data:
  {"annotated_genes":["SJAG_03591","SJAG_05346","SJAG_02605","SJAG_04920","SJAG_03970","SJAG_00991"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90097],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905533"},{"annotations":[91937],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035432"},{"annotations":[95338,100892,93756,112591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905589"},{"annotations":[93757,95339,100893],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905534"},{"annotations":[95340],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905626"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the directed movement of organic acids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of transport","termid":"GO:0051049"},{"relation_name":"regulates","term_name":"organic acid transport","termid":"GO:0015849"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00991":null,"SJAG_02605":null,"SJAG_03591":null,"SJAG_03970":null,"SJAG_04920":null,"SJAG_05346":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of organic acid transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0032890","terms_by_termid":{"GO:0035432":null,"GO:1905533":null,"GO:1905534":null,"GO:1905589":null,"GO:1905626":null}}


id: PBO:0029418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_palmitoylation_during_meiosis","termid":"PBO:0029418"}


id: PBO:0035970
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4_acetylation_during_vegetative_growth","termid":"PBO:0035970"}


id: GO:0051084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of assisting in the correct noncovalent folding of newly formed polypeptides or folding intermediates of polypeptides that have exited the ribosome and/or have been stabilized and transferred by other chaperone proteins. This process could involve several cycles of ATP hydrolysis.","definition_xrefs":["GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"'de novo' protein folding","termid":"GO:0006458"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006457"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0051604","GO:0008150","GO:0006457"],"is_obsolete":false,"name":"'de novo' post-translational protein folding","secondary_identifiers":["Reactome:R-HSA-391251"],"synonyms":[{"name":"'de novo' posttranslational protein folding","type":"exact"}],"termid":"GO:0051084"}


id: MONDO:0003743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant hemangiopericytoma arising in the heart.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"heart sarcoma","termid":"MONDO:0003354"},{"relation_name":"is_a","term_name":"hemangiopericytoma","termid":"MONDO:0005094"},{"relation_name":"is_a","term_name":"heart neoplasm","termid":"MONDO:0021209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"heart malignant hemangiopericytoma","secondary_identifiers":["NCIT:C5365","DOID:6034","UMLS:C1334567","MEDGEN:233144"],"synonyms":[{"name":"heart hemangiopericytoma","type":"exact"},{"name":"heart spindle cell tumor","type":"exact"},{"name":"heart spindle cell tumour","type":"exact"},{"name":"malignant Cardiac hemangiopericytoma","type":"exact"},{"name":"malignant heart hemangiopericytoma","type":"exact"},{"name":"malignant hemangiopericytoma of heart","type":"exact"},{"name":"malignant hemangiopericytoma of the heart","type":"exact"}],"termid":"MONDO:0003743","xrefs":{"Monarch":{"xref_id":"0003743"}}}


id: GO:0042641
data:
  {"annotated_genes":["SJAG_01739"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[67499],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001725"}]},"cv_name":"cellular_component","definition":"Any complex of actin, myosin, and accessory proteins.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"actin cytoskeleton","termid":"GO:0015629"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01739":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0015629"}],"interesting_parent_ids":["GO:0005575","GO:0015629"],"is_obsolete":false,"name":"actomyosin","references_by_uniquename":{"GO_REF:0000044":null},"synonyms":[{"name":"actomyosin complex","type":"exact"},{"name":"actomyosin structure","type":"exact"}],"termid":"GO:0042641","terms_by_termid":{"GO:0001725":null}}


id: GO:0006685
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sphingomyelin, N-acyl-4-sphingenyl-1-O-phosphorylcholine.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sphingomyelin metabolic process","termid":"GO:0006684"},{"relation_name":"is_a","term_name":"phospholipid catabolic process","termid":"GO:0009395"},{"relation_name":"is_a","term_name":"sphingolipid catabolic process","termid":"GO:0030149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sphingomyelin catabolic process","synonyms":[{"name":"sphingomyelin breakdown","type":"exact"},{"name":"sphingomyelin catabolism","type":"exact"},{"name":"sphingomyelin degradation","type":"exact"}],"termid":"GO:0006685"}


id: GO:0000338
data:
  {"annotated_genes":["SJAG_03733","SJAG_00795","SJAG_00720","SJAG_02341","SJAG_04011","SJAG_05977","SJAG_02764","SJAG_03325","SJAG_00776","SJAG_04948"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72975,80736,82386,91649,93463,94897,95018,97311,108524,112383],"is_not":false,"summary":null,"term":"GO:0000338"}]},"cv_name":"biological_process","definition":"The removal of a ubiquitin-like protein of the NEDD8 type from a protein.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification by small protein removal","termid":"GO:0070646"}],"gene_count":10,"genes_by_uniquename":{"SJAG_00720":null,"SJAG_00776":null,"SJAG_00795":null,"SJAG_02341":null,"SJAG_02764":null,"SJAG_03325":null,"SJAG_03733":null,"SJAG_04011":null,"SJAG_04948":null,"SJAG_05977":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein deneddylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0010388"],"synonyms":[{"name":"cullin deneddylation","type":"narrow"}],"termid":"GO:0000338","terms_by_termid":{"GO:0000338":null}}


id: GO:0051683
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of the Golgi to a specific location.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi localization","termid":"GO:0051645"},{"relation_name":"is_a","term_name":"establishment of localization in cell","termid":"GO:0051649"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"establishment of Golgi localization","synonyms":[{"name":"establishment of Golgi apparatus localization","type":"exact"},{"name":"establishment of Golgi body localization","type":"exact"},{"name":"establishment of Golgi localisation","type":"exact"}],"termid":"GO:0051683"}


id: PBO:0090945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GARP complex subunit Vps53","termid":"PBO:0090945"}


id: PBO:0001124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS complex subunit Vps16 (predicted)","termid":"PBO:0001124"}


id: GO:0102658
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5-methylthio-2-oxopentanoate + a standard alpha amino acid = L-homomethionine + a 2-oxo carboxylate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-oxo-5-methylthiopentanoate aminotransferase activity (obsolete GO:0102658)","termid":"GO:0102658"}


id: PBO:0084120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Heme-binding protein; involved in regulation of cytochrome P450 protein Erg11p; damage response protein, related to mammalian membrane progesterone receptors; mutations lead to defects in telomeres, mitochondria, and sterol synthesis","termid":"PBO:0084120"}


id: PBO:0061576
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nth like DNA glycosylase 1","termid":"PBO:0061576"}


id: PBO:0050295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A0","termid":"PBO:0050295"}


id: PBO:0041042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCA1/BRCA2-containing complex subunit 3","termid":"PBO:0041042"}


id: PBO:0046297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EMSY divergent transcript","termid":"PBO:0046297"}


id: FYPO:0004701
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a cell does not alter the timing or rate of cell division when shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PMID:689088","PomBase:mah","PMID:872891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003"],"is_obsolete":false,"name":"abolished cell division timing change upon nitrogen source shift","synonyms":[{"name":"abolished cell division rate change upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division rate upon nitrogen source shift","type":"related"},{"name":"abolished change in cell division timing upon nitrogen source shift","type":"exact"},{"name":"abolished nutritional modulation of cell division","type":"related"},{"name":"unchanged cell division timing upon nitrogen source shift","type":"related"}],"termid":"FYPO:0004701"}


id: MONDO:1012778
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any epidermolysis bullosa simplex that occurs in dogs due to a mutation in the PLEC gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex, dog","termid":"MONDO:1011500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epidermolysis bullosa simplex, PLEC-related, dog","secondary_identifiers":["OMIA:002080-9615"],"termid":"MONDO:1012778","xrefs":{"Monarch":{"xref_id":"1012778"}}}


id: PBO:0073441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stratifin","termid":"PBO:0073441"}


id: PR:Q09188
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- anc1 gene.","definition_xrefs":["UniProtKB:Q09188","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP,ATP carrier protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC530.10c","synonyms":[{"name":"ADP/ATP translocase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"ANT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-anc1","type":"exact"},{"name":"adenine nucleotide translocator (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09188"}


id: PBO:0069677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 954, pseudogene","termid":"PBO:0069677"}


id: PBO:0073490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shugoshin 2","termid":"PBO:0073490"}


id: PBO:0076692
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TCEAL8 pseudogene 1","termid":"PBO:0076692"}


id: PBO:0061471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NRBF2 pseudogene 6","termid":"PBO:0061471"}


id: PBO:0041700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium homeostasis modulator family member 6","termid":"PBO:0041700"}


id: GO:0070020
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A protein complex that consists of a dimeric transforming growth factor beta (TGF-beta) type II receptor bound to a TGF-beta1 dimer.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta1-type II receptor complex (obsolete GO:0070020)","synonyms":[{"name":"TGF-beta receptor II-TGF-beta1 complex","type":"exact"},{"name":"TGF-beta1-type II receptor complex","type":"exact"}],"termid":"GO:0070020"}


id: PBO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amine oxidase copper containing 1","termid":"PBO:0039633"}


id: PBO:0049317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione S-transferase theta pseudogene 2","termid":"PBO:0049317"}


id: FYPO:0001928
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype in which regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal mitotic cell cycle","termid":"FYPO:0000411"},{"relation_name":"is_a","term_name":"regulation phenotype during vegetative growth","termid":"FYPO:0001334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal regulation of mitotic cell cycle","synonyms":[{"name":"normal cell cycle regulation during vegetative growth","type":"exact"},{"name":"normal regulation of mitotic cell cycle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001928"}


id: GO:0016083
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Fusion of the synaptic vesicle with the postsynaptic membrane.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete synaptic vesicle fusion (obsolete GO:0016083)","synonyms":[{"name":"synaptic vesicle fusion","type":"exact"}],"termid":"GO:0016083"}


id: GO:1990322
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A collagen homotrimer of alpha1(XXIII) chains; type XXIII collagen triple helices span the plasma membrane.","definition_xrefs":["GOC:bhm","PMID:17876790"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane collagen trimer","termid":"GO:0030936"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005886"],"is_obsolete":false,"name":"collagen type XXIII trimer","termid":"GO:1990322"}


id: PBO:0027861
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_kinase_activity_during_mitotic_S_phase","termid":"PBO:0027861"}


id: GO:0090619
data:
  {"annotated_genes":["SJAG_02241","SJAG_05196","SJAG_01805","SJAG_01546","SJAG_02320","SJAG_03915","SJAG_04745","SJAG_02368","SJAG_01613","SJAG_01464"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93295,95798,95871,96778,98772,101221,101918,104825,109127,120915],"is_not":false,"summary":null,"term":"GO:0090619"}]},"cv_name":"cellular_component","definition":"Either of the ends of a meiotic spindle, a spindle that forms as part of meiosis, where spindle microtubules are organized; usually contains a microtubule organizing center and accessory molecules, spindle microtubules and astral microtubules.","definition_xrefs":["GOC:ha","PMID:18250200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole","termid":"GO:0000922"},{"relation_name":"part_of","term_name":"meiotic spindle","termid":"GO:0072687"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01464":null,"SJAG_01546":null,"SJAG_01613":null,"SJAG_01805":null,"SJAG_02241":null,"SJAG_02320":null,"SJAG_02368":null,"SJAG_03915":null,"SJAG_04745":null,"SJAG_05196":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005575"],"is_obsolete":false,"name":"meiotic spindle pole","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0090619","terms_by_termid":{"GO:0090619":null}}


id: PBO:0111817
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMT1 subfamily","termid":"PBO:0111817"}


id: MONDO:0800399
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal dominant retinopathy caused by variants in the RP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0006025"],"is_obsolete":false,"name":"RP1-related recessive retinopathy","termid":"MONDO:0800399","xrefs":{"Monarch":{"xref_id":"0800399"}}}


id: PBO:0069591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 865, pseudogene","termid":"PBO:0069591"}


id: PBO:0040220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha tubulin acetyltransferase 1","termid":"PBO:0040220"}


id: PBO:0074227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 46 member 1","termid":"PBO:0074227"}


id: FYPO:0004248
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the vacuolar membrane is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to vacuole","termid":"FYPO:0007058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to vacuolar membrane","synonyms":[{"name":"normal protein localisation to vacuolar membrane","type":"exact"},{"name":"normal protein localization in vacuolar membrane","type":"exact"},{"name":"normal protein localization to vacuolar membrane during mitotic cell cycle","type":"related"},{"name":"normal protein localization to vacuolar membrane during vegetative growth","type":"exact"},{"name":"normal protein localization to vacuole membrane","type":"exact"}],"termid":"FYPO:0004248"}


id: MONDO:1010093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"AL amyloidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertrophic cardiomyopathy, non-human animal","termid":"MONDO:1010015"},{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"},{"relation_name":"is_a","term_name":"amyloidosis, non-human animal","termid":"MONDO:1011415"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AL amyloidosis, non-human animal","secondary_identifiers":["OMIA:000039"],"termid":"MONDO:1010093","xrefs":{"Monarch":{"xref_id":"1010093"}}}


id: MONDO:0014152
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the PRDM16 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"},{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 8","secondary_identifiers":["UMLS:C3809288","DOID:0081157","GARD:15952","OMIM:615373","MEDGEN:815618"],"synonyms":[{"name":"LVNC8","type":"related"},{"name":"PRDM16 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 1Ll","type":"related"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in PRDM16","type":"exact"},{"name":"left ventricular noncompaction 8","type":"exact"},{"name":"left ventricular noncompaction type 8","type":"exact"}],"termid":"MONDO:0014152","xrefs":{"Monarch":{"xref_id":"0014152"}}}


id: PBO:0059352
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein S16","termid":"PBO:0059352"}


id: MONDO:0006993
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart failure caused by abnormal myocardial contraction during systole leading to defective cardiac emptying.","definition_xrefs":["MESH:D054143"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congestive heart failure","termid":"MONDO:0005009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"systolic heart failure","secondary_identifiers":["ICD9:428.2","MEDGEN:210050","SCTID:417996009","ICD9:428.20","MedDRA:10074631","UMLS:C1135191","EFO:1001207","DOID:9651"],"termid":"MONDO:0006993","xrefs":{"Monarch":{"xref_id":"0006993"}}}


id: FYPO:0004557
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal. Increased growth may reflect an increased growth rate (i.e. faster growth), growth that occurs to a greater extent than normal, or both.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell population growth","termid":"FYPO:0003937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002057","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"increased vegetative cell population growth","synonyms":[{"name":"fast aerobic vegetative cell population growth","type":"narrow"},{"name":"fast vegetative cell population growth","type":"narrow"},{"name":"increased aerobic vegetative cell population growth","type":"narrow"}],"termid":"FYPO:0004557"}


id: GO:0170011
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecule that recognizes stalled ribosomes and initiates a signaling response.","definition_xrefs":["PMID:32610081","PMID:36638793","PMID:32289254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular sensor activity","termid":"GO:0140299"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140299"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0140299","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"stalled ribosome sensor activity","termid":"GO:0170011"}


id: PBO:0083366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps the verified ORF DIC1/YLR348C","termid":"PBO:0083366"}


id: PBO:0026950
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_vorinostat","termid":"PBO:0026950"}


id: PBO:0057367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548aj-1","termid":"PBO:0057367"}


id: PBO:0005745
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ammonium transporter Amt1","termid":"PBO:0005745"}


id: MONDO:0011676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"PHACE is an acronym used to describe a syndrome characterized by the association of posterior fossa brain malformations, large facial haemangiomas, anatomical anomalies of the cerebral arteries, aortic coarctation and other cardiac anomalies, and eye abnormalities. Sternal anomalies are also sometimes present, and in these cases the syndrome is referred to as PHACES. Two additional manifestations have recently been added to the clinical spectrum of PHACE syndrome: stenosis of the vessels at the base of the skull and segmental longitudinal dilations of the internal carotid artery.","definition_xrefs":["Orphanet:42775"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neurovascular malformation (obsolete MONDO:0015145)","termid":"MONDO:0015145"},{"relation_name":"excluded_subClassOf","term_name":"obsolete vascular tumor with associated anomalies (obsolete MONDO:0018718)","termid":"MONDO:0018718"},{"relation_name":"excluded_subClassOf","term_name":"obsolete genetic vascular tumor (obsolete MONDO:0018729)","termid":"MONDO:0018729"},{"relation_name":"excluded_subClassOf","term_name":"obsolete Moyamoya syndrome (obsolete MONDO:0018792)","termid":"MONDO:0018792"},{"relation_name":"excluded_subClassOf","term_name":"obsolete palpebral tumor with a vascular malformation (obsolete MONDO:0020182)","termid":"MONDO:0020182"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-variable intellectual disability syndrome","termid":"MONDO:0015160"},{"relation_name":"is_a","term_name":"central nervous system malformation","termid":"MONDO:0020022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0020022","MONDO:0002320"],"is_obsolete":false,"name":"PHACE syndrome","secondary_identifiers":["NORD:1927","GARD:8338","MedDRA:10068032","OMIM:606519","UMLS:C1847874","icd11.foundation:1825849023","MEDGEN:376231"],"synonyms":[{"name":"P-CIIS","type":"related"},{"name":"PHACE association","type":"related"},{"name":"Phaces association","type":"related"},{"name":"Posterior fossa brain malformations, hemangiomas of the face, arterial anomalies, cardiac anomalies, and eye abnormalities","type":"related"},{"name":"aortic aneurysm, giant congenital","type":"related"},{"name":"pascual-Castroviejo syndrome type 2","type":"exact"},{"name":"pascual-Castroviejo type II syndrome","type":"related"}],"termid":"MONDO:0011676","xrefs":{"Monarch":{"xref_id":"0011676"}}}


id: PBO:0049926
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HGH1 homolog","termid":"PBO:0049926"}


id: PBO:0087934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Translational elongation factor EF-1 alpha; GTP-bound active form, binds to and delivers aminoacylated tRNA to the A-site of ribosomes for elongation of nascent polypeptides; moonlighting function as an actin binding and bundling protein; association with GTPase Rho1p on the vacuolar membrane may facilitate F-actin remodeling; involved in tRNA re-export from the nucleus","termid":"PBO:0087934"}


id: GO:0015252
data:
  {"annotated_genes":["SJAG_02105","SJAG_03114","SJAG_00133","SJAG_MIT15","SJAG_03925","SJAG_05204","SJAG_MIT37","SJAG_00985","SJAG_00836","SJAG_07003","SJAG_00542","SJAG_00915","SJAG_02598","SJAG_02564","SJAG_MIT09","SJAG_00438","SJAG_04122"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[109939,74690,80078,109847,58337,121161,79764,81262,71842,77768,95882,72134,96861,121154,121148,95291,103839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046933"}]},"cv_name":"molecular_function","definition":"Enables the facilitated diffusion of a hydrogen ion (by an energy-independent process) involving passage through a transmembrane aqueous pore or channel without evidence for a carrier-mediated mechanism.","definition_xrefs":["GOC:mtg_transport","GOC:pr","ISBN:0815340729"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monoatomic cation channel activity","termid":"GO:0005261"},{"relation_name":"is_a","term_name":"proton transmembrane transporter activity","termid":"GO:0015078"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00133":null,"SJAG_00438":null,"SJAG_00542":null,"SJAG_00836":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_02105":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_03114":null,"SJAG_03925":null,"SJAG_04122":null,"SJAG_05204":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"proton channel activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9729542"],"synonyms":[{"name":"hydrogen ion channel activity","type":"exact"}],"termid":"GO:0015252","terms_by_termid":{"GO:0046933":null}}


id: MONDO:0034823
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete oral-facial-digital syndrome with short stature and brachymesophalangy (obsolete MONDO:0034823)","secondary_identifiers":["GARD:22069"],"termid":"MONDO:0034823","xrefs":{"Monarch":{"xref_id":"0034823"}}}


id: PBO:0049715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HAUS augmin like complex subunit 1 pseudogene 3","termid":"PBO:0049715"}


id: GO:0140777
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A molecular function that involves direct binding to one of the subunits of a protein-containing complex, thus preventing an interaction with a factor that would promote dissociation of the complex.","definition_xrefs":["PMID:34040253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular_function","termid":"GO:0003674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674"],"is_obsolete":false,"name":"protein-containing complex stabilizing activity","termid":"GO:0140777"}


id: GO:1905848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["GO_REF:0000058","PMID:23721876","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"positive regulation of response to stimulus","termid":"GO:0048584"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"positively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cellular response to oxidopamine","synonyms":[{"name":"activation of cellular response to oxidopamine","type":"narrow"},{"name":"up regulation of cellular response to oxidopamine","type":"exact"},{"name":"up-regulation of cellular response to oxidopamine","type":"exact"},{"name":"upregulation of cellular response to oxidopamine","type":"exact"}],"termid":"GO:1905848"}


id: PBO:0082345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent Lon protease; involved in degradation of misfolded mitochondrial proteins; required for mitochondrial maintenance and biogenesis; regulates mitochondrial DNA copy number with Mrx6p; subunit of a complex containing Mrx6p, Pet20p, and Mam33p that may regulate mtDNA replication; protease-independent, chaperone-like function in mitochondrial membrane complex assembly; localizes to the mitochondrial matrix","termid":"PBO:0082345"}


id: MONDO:0013050
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lethal polymalformative syndrome, Boissel type","secondary_identifiers":["Orphanet:210144","MESH:C567856","MEDGEN:414158","OMIM:612938","UMLS:C2752001","GARD:17110"],"synonyms":[{"name":"GDFD","type":"related"},{"name":"growth retardation, developmental delay, and facial dysmorphism","type":"related"},{"name":"growth retardation, developmental delay, facial dysmorphism","type":"exact"}],"termid":"MONDO:0013050","xrefs":{"Monarch":{"xref_id":"0013050"}}}


id: GO:0010240
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A plastid complex that carries out the oxidative decarboxylation of pyruvate to form acetyl-CoA; comprises subunits possessing three catalytic activities: pyruvate dehydrogenase (E1), dihydrolipoamide S-acetyltransferase (E2), and dihydrolipoamide dehydrogenase (E3). This complex is found in plant plastids and is distinct from the one found in mitochondria.","definition_xrefs":["PMID:9393637","GOC:mtg_sensu"],"gene_count":0,"genotype_count":0,"name":"obsolete plastid pyruvate dehydrogenase complex (obsolete GO:0010240)","synonyms":[{"name":"dehydrogenase complex","type":"broad"}],"termid":"GO:0010240"}


id: MONDO:0011415
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Leber congenital amaurosis in which the cause of the disease is a mutation in the SPATA7 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Leber congenital amaurosis","termid":"MONDO:0018998"},{"relation_name":"is_a","term_name":"SPATA7-related retinopathy","termid":"MONDO:1040070"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0002320"],"is_obsolete":false,"name":"Leber congenital amaurosis 3","secondary_identifiers":["MEDGEN:346964","GARD:9661","DOID:0110331","OMIM:604232","UMLS:C1858677","MESH:C565814","ICD10CM:H35.5"],"synonyms":[{"name":"LCA3","type":"exact"},{"name":"Leber congenital amaurosis 3","type":"exact"},{"name":"Leber congenital amaurosis caused by mutation in SPATA7","type":"exact"},{"name":"Leber congenital amaurosis type 3","type":"exact"},{"name":"SPATA7 Leber congenital amaurosis","type":"exact"},{"name":"amaurosis congenita of Leber, type 3","type":"related"},{"name":"retinitis pigmentosa, juvenile, Spata7-related","type":"related"},{"name":"retinitis pigmentosa, juvenile, autosomal recessive","type":"exact"}],"termid":"MONDO:0011415","xrefs":{"Monarch":{"xref_id":"0011415"}}}


id: PBO:0055304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2731","termid":"PBO:0055304"}


id: PBO:0062165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily K member 6 pseudogene","termid":"PBO:0062165"}


id: PBO:0059055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MNX1 antisense RNA 2","termid":"PBO:0059055"}


id: FYPO:0002789
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed when the population in which the cell is found is in stationary phase in which vacuoles are smaller than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small vacuoles","termid":"FYPO:0002787"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"small vacuoles during stationary phase","synonyms":[{"name":"decreased vacuole size during stationary phase","type":"exact"},{"name":"reduced vacuole size during stationary phase","type":"exact"}],"termid":"FYPO:0002789"}


id: PBO:0003879
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CGI-48 family (predicted)","termid":"PBO:0003879"}


id: PBO:0069246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 501, pseudogene","termid":"PBO:0069246"}


id: PBO:0031471
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nickel","termid":"PBO:0031471"}


id: FYPO:0000087
data:
  {"alleles_by_uniquename":{"SJAG_04312:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04312","name":"pka1delta","uniquename":"SJAG_04312:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121537],"is_not":false,"summary":null,"term":"FYPO:0000087"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to hydrogen peroxide. Cells stop growing (and may die) at a concentration of hydrogen peroxide that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"},{"relation_name":"is_a","term_name":"sensitive to oxidative stress","termid":"FYPO:0000726"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04312":null},"genotype_count":1,"genotypes_by_uniquename":{"pka1delta":{"display_name":"pka1delta","display_uniquename":"pka1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04312:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002683","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to hydrogen peroxide","references_by_uniquename":{"PMID:27678009":null},"single_locus_annotated_genes":["SJAG_04312"],"single_locus_genotype_uniquenames":["pka1delta"],"synonyms":[{"name":"hypersensitive to hydrogen peroxide","type":"exact"},{"name":"sensitive to H2O2","type":"exact"},{"name":"sensitive to hydrogen peroxide during mitotic cell cycle","type":"related"},{"name":"sensitive to hydrogen peroxide during vegetative growth","type":"exact"}],"termid":"FYPO:0000087","terms_by_termid":{"FYPO:0000087":null}}


id: GO:0033259
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which new strands of DNA are synthesized in a plastid.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication","termid":"GO:0006261"},{"relation_name":"is_a","term_name":"plastid DNA metabolic process","termid":"GO:0033258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"plastid DNA replication","synonyms":[{"name":"plastid DNA synthesis","type":"related"},{"name":"replication of plastid DNA","type":"exact"}],"termid":"GO:0033259"}


id: PBO:0047210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 221 member A","termid":"PBO:0047210"}


id: PBO:0002040
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L5 (predicted)","termid":"PBO:0002040"}


id: PBO:0048232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G antigen 2C","termid":"PBO:0048232"}


id: MONDO:0010350
data:
  {"annotated_genes":["SJAG_04703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89012],"is_not":false,"summary":null,"term":"MONDO:0010350"}]},"cv_name":"mondo","definition":"Any primary ovarian failure in which the cause of the disease is a mutation in the DIAPH2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 2A","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:300511","UMLS:C1845293","MESH:C564498","MEDGEN:336902","DOID:0080858"],"synonyms":[{"name":"DIAPH2 primary ovarian failure","type":"exact"},{"name":"POF2A","type":"related"},{"name":"premature ovarian failure 2A","type":"exact"},{"name":"premature ovarian failure 2A, X-linked dominant","type":"exact"},{"name":"premature ovarian failure type 2A","type":"exact"},{"name":"primary ovarian failure caused by mutation in DIAPH2","type":"exact"}],"termid":"MONDO:0010350","terms_by_termid":{"MONDO:0010350":null},"xrefs":{"Monarch":{"xref_id":"0010350"}}}


id: PATO:0000067
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000067 relative pilosity (obsolete PATO:0000067)","termid":"PATO:0000067"}


id: PBO:0053528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 525","termid":"PBO:0053528"}


id: PR:G2TRJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tam1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRJ4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein tam1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.19","synonyms":[{"name":"Spom972h-tam1","type":"exact"},{"name":"transcripts altered in meiosis protein 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:G2TRJ4"}


id: PBO:0085566
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein disulfide isomerase of the endoplasmic reticulum lumen; EUG1 has a paralog, PDI1, that arose from the whole genome duplication; function overlaps with that of Pdi1p; may interact with nascent polypeptides in the ER","termid":"PBO:0085566"}


id: PBO:0077947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ala (anticodon AGC) 7-1","termid":"PBO:0077947"}


id: PBO:0078888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gln (anticodon CTG) 1-5","termid":"PBO:0078888"}


id: GO:0097235
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of fatty acid beta-oxidation by activating or increasing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:1899286","GOC:dgf"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of fatty acid beta-oxidation by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0097235)","termid":"GO:0097235"}


id: GO:0070547
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the transfer of an amino group from L-tyrosine to an acceptor, usually a 2-oxo acid.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete L-tyrosine aminotransferase activity (obsolete GO:0070547)","termid":"GO:0070547"}


id: MONDO:0019798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete acute hepatic porphyria (obsolete MONDO:0019798)","termid":"MONDO:0019798","xrefs":{"Monarch":{"xref_id":"0019798"}}}


id: PBO:0082980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic type 2C protein phosphatase (PP2C); identified as a high-copy number suppressor of cnb1 mpk1 synthetic lethality; overexpression decreases high-osmolarity induced Hog1p phosphorylation and kinase activity","termid":"PBO:0082980"}


id: PBO:0034656
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_DNA_recombination_frequency_at_subtelomere","termid":"PBO:0034656"}


id: PR:Q11004
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic-type peptidyl-prolyl cis-trans isomerase D that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02048","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40 kDa peptidyl-prolyl cis-trans isomerase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1B3.03c","secondary_identifiers":["UniProtKB:Q11004"],"synonyms":[{"name":"CYP-40 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"PPIase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Rotamase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PPID","type":"exact"},{"name":"cyclophilin-40 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q11004"}


id: FYPO:0005635
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the spindle begins later than normal during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah","PMID:21920317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to meiotic spindle","termid":"FYPO:0006454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"delayed onset of protein localization to spindle during meiosis I","synonyms":[{"name":"delayed onset of protein localisation to spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to meiosis I spindle","type":"exact"},{"name":"delayed onset of protein localization to meiotic spindle during meiosis I","type":"exact"},{"name":"delayed onset of protein localization to spindle during first meiotic nuclear division","type":"exact"},{"name":"delayed protein localization to spindle during meiosis I","type":"exact"}],"termid":"FYPO:0005635"}


id: PBO:0120289
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYT1L antisense RNA 2","termid":"PBO:0120289"}


id: PBO:0052071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"katanin catalytic subunit A1","termid":"PBO:0052071"}


id: GO:0050050
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-leucine + acetyl-CoA = N-acetyl-L-leucine + CoA + H+.","definition_xrefs":["EC:2.3.1.66","RHEA:20089"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-amino-acid N-acetyltransferase activity","termid":"GO:0140085"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"L-leucine N-acetyltransferase activity","secondary_identifiers":["KEGG_REACTION:R01089","MetaCyc:LEUCINE-N-ACETYLTRANSFERASE-RXN"],"synonyms":[{"name":"acetyl-CoA:L-leucine N-acetyltransferase activity","type":"related"},{"name":"leucine acetyltransferase activity","type":"related"}],"termid":"GO:0050050"}


id: FYPO:0001210
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of Glc2Man9GlcNAc2 measured in a cell is too low to detect. Glc2Man9GlcNAc2 is an N-glycan that is involved in post-translational modification of proteins, and consists of a branched ten-membered mannooligosaccharide containing two D-glucose residues, nine D-mannosyl residues and two N-acetylglucosamine residues.","definition_xrefs":["CHEBI:59082","PMID:9813085","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide absent from cell","termid":"FYPO:0001209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"Glc2Man9GlcNAc absent from cell","synonyms":[{"name":"Glc2Man9GlcNAc absent from cell during mitotic cell cycle","type":"related"},{"name":"Glc2Man9GlcNAc absent from cell during vegetative growth","type":"exact"},{"name":"Glc2Man9GlcNAc2 absent from cell","type":"exact"},{"name":"absent Glc2Man9GlcNAc","type":"exact"}],"termid":"FYPO:0001210"}


id: GO:0051045
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of membrane protein ectodomain proteolysis.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein catabolic process","termid":"GO:0042177"},{"relation_name":"is_a","term_name":"negative regulation of proteolysis","termid":"GO:0045861"},{"relation_name":"is_a","term_name":"regulation of membrane protein ectodomain proteolysis","termid":"GO:0051043"},{"relation_name":"negatively_regulates","term_name":"membrane protein ectodomain proteolysis","termid":"GO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"negatively_regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"negative regulation of membrane protein ectodomain proteolysis","synonyms":[{"name":"down regulation of membrane protein ectodomain proteolysis","type":"exact"},{"name":"down-regulation of membrane protein ectodomain proteolysis","type":"exact"},{"name":"downregulation of membrane protein ectodomain proteolysis","type":"exact"},{"name":"inhibition of membrane protein ectodomain proteolysis","type":"narrow"}],"termid":"GO:0051045"}


id: PBO:0029278
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_ubiquitin_ligase_activity","termid":"PBO:0029278"}


id: PBO:0001887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribomal-ubiquitin fusion protein Ubi5 (predicted)","termid":"PBO:0001887"}


id: MOD:00298
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts four L-cysteine residues, an L-glutamic acid residue, an L-histidine residue, an L-serine residue and a one-nickel three-iron three-sulfur three-oxygen cluster to tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide.","definition_xrefs":["RESID:AA0293","PubMed:2550436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iron-sulfur cluster containing modification","termid":"MOD:00739"},{"relation_name":"is_a","term_name":"nickel containing modified residue","termid":"MOD:00741"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-cysteine residue","termid":"MOD:02067"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-glutamic acid residue","termid":"MOD:02068"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-histidine residue","termid":"MOD:02070"},{"relation_name":"is_a","term_name":"metal or metal cluster coordinated L-serine residue","termid":"MOD:02072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","synonyms":[{"name":"Ni-3Fe-2S-3O cluster","type":"exact"},{"name":"carbon monoxide dehydrogenase nickel-iron cofactor","type":"exact"},{"name":"hybrid nickel-triiron cluster","type":"exact"},{"name":"mu-1:2kappaO-oxido-mu-1:3kappaO-oxido-mu-2:4kappaO-oxido-mu-3:4kappaS-sulfido-mu3-2:3:4kappaS-sulfido-S-cysteinyl-N1'-histidino-O5-glutamato 1-iron-S5-cysteine persulfido-O3-serinyl 2-nickel-3,4-bis-(S-cysteinyl iron)","type":"exact"},{"name":"tris-L-cysteinyl L-cysteine persulfido L-glutamato L-histidino L-serinyl nickel triiron disulfide trioxide","type":"exact"}],"termid":"MOD:00298"}


id: PBO:0031258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_DNA_replication_checkpoint","termid":"PBO:0031258"}


id: PBO:0062141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 8B pseudogene","termid":"PBO:0062141"}


id: GO:1900997
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of benzene.","definition_xrefs":["UniPathway:UPA00272","GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benzene metabolic process","termid":"GO:0018910"},{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"benzene biosynthetic process","synonyms":[{"name":"benzene anabolism","type":"exact"},{"name":"benzene biosynthesis","type":"exact"},{"name":"benzene formation","type":"exact"},{"name":"benzene synthesis","type":"exact"}],"termid":"GO:1900997"}


id: GO:1905604
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases blood-brain barrier permeability, the quality of the blood-brain barrier that allows for a controlled passage of substances (e.g. macromolecules, small molecules, ions) into and out of the brain.","definition_xrefs":["GOC:bc","GOC:als","GO_REF:0000058","GOC:TermGenie","PMID:30280653","PMID:22524708","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of vascular permeability","termid":"GO:0043116"},{"relation_name":"is_a","term_name":"regulation of blood-brain barrier permeability","termid":"GO:1905603"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of blood-brain barrier permeability","synonyms":[{"name":"down-regulation of BBB permeability","type":"exact"},{"name":"down-regulation of blood-brain barrier permeability","type":"exact"},{"name":"down-regulation of blood/brain barrier permeability","type":"exact"},{"name":"downregulation of BBB permeability","type":"exact"},{"name":"downregulation of blood-brain barrier permeability","type":"exact"},{"name":"downregulation of blood/brain barrier permeability","type":"exact"},{"name":"inhibition of maintenance of permeability of BBB","type":"narrow"},{"name":"inhibition of maintenance of permeability of blood-brain barrier","type":"narrow"},{"name":"negative regulation of BBB permeability","type":"exact"},{"name":"negative regulation of blood/brain barrier permeability","type":"exact"}],"termid":"GO:1905604"}


id: MONDO:0020165
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic epicanthus (obsolete MONDO:0020165)","secondary_identifiers":["Orphanet:98574"],"termid":"MONDO:0020165","xrefs":{"Monarch":{"xref_id":"0020165"}}}


id: PBO:0111917
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TENA/THI domain","termid":"PBO:0111917"}


id: GO:0033221
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + urea(out) = ADP + phosphate + urea(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urea transmembrane transporter activity","termid":"GO:0015204"},{"relation_name":"is_a","term_name":"ATPase-coupled transmembrane transporter activity","termid":"GO:0042626"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase-coupled urea transmembrane transporter activity","secondary_identifiers":["RHEA:32803"],"synonyms":[{"name":"ATP-dependent urea transmembrane transporter activity","type":"exact"},{"name":"carbamide-transporting ATPase activity","type":"exact"},{"name":"urea-transporting ATPase activity","type":"exact"}],"termid":"GO:0033221"}


id: GO:0075335
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont organism activates, maintains or increases the frequency, rate or extent of its adenylate cyclase-mediated signal transduction as a result of detecting molecules of its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of symbiont adenylate cyclase-mediated signal transduction in response to host (obsolete GO:0075335)","termid":"GO:0075335"}


id: PBO:0082467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium permeable gated cation channel; functions as an osmosensitive, calcium-permeable cation channel when expressed in a heterologous system; may be involved in detoxification; similar to Arabidopsis CSC1","termid":"PBO:0082467"}


id: FYPO:0002424
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch localization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle. Cortical patches are normally present at both old and new ends of the cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cortical patch localization","termid":"FYPO:0001294"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal actin cortical patch localization during mitotic interphase","synonyms":[{"name":"normal F-actin patch localization during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localisation during mitotic interphase","type":"exact"},{"name":"normal actin cortical patch localization at non-growing end during mitotic interphase","type":"related"},{"name":"normal actin cortical patch localization during mitotic interphase during vegetative growth","type":"exact"},{"name":"normal actin cortical patch location during mitotic interphase","type":"related"},{"name":"normal actin patch localization during mitotic interphase","type":"exact"}],"termid":"FYPO:0002424"}


id: GO:0021986
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the habenula over time from its initial formation until its mature state. The habenula is the group of nuclei that makes up the stalk of the pineal gland.","definition_xrefs":["GOC:jid","ISBN:9780721601465","GOC:dgh","GO_REF:0000021","GOC:cls","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"epithalamus development","termid":"GO:0021538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"habenula development","termid":"GO:0021986"}


id: MONDO:0000673
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Agnosia characterized by the inability to integrate perceptual wholes within knowledge.","definition_xrefs":["Wikipedia:Integrative_agnosia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"agnosia","termid":"MONDO:0005638"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrative agnosia","secondary_identifiers":["DOID:0060143"],"termid":"MONDO:0000673","xrefs":{"Monarch":{"xref_id":"0000673"}}}


id: GO:0097446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, and/or maintained in, a specific location in a eisosome filament (also called linear eisosome), a filamentous cortical structure formed, in S. pombe, by the eisosome component Pil1.","definition_xrefs":["PMID:23722945","GOC:vw","PMID:22869600","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to cytoskeleton","termid":"GO:0044380"},{"relation_name":"is_a","term_name":"protein localization to cell cortex","termid":"GO:0072697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to eisosome filament","synonyms":[{"name":"protein localization to linear eisosome","type":"exact"}],"termid":"GO:0097446"}


id: SO:0001891
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A feature amplification of a region containing a regulatory region.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_amplification","termid":"SO:0001880"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory_region_amplification","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:regulatory_region_amplification","type":"exact"},{"name":"regulatory region amplification","type":"exact"}],"termid":"SO:0001891"}


id: PBO:0043660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coenzyme Q5, methyltransferase","termid":"PBO:0043660"}


id: PBO:0091948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxal reductase","termid":"PBO:0091948"}


id: PBO:0062903
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OXR1 antisense RNA 1","termid":"PBO:0062903"}


id: GO:0102448
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: rhamnetin + S-adenosyl-L-methionine = 7,4'-O-dimethylquercetin + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["RHEA:74731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"rhamnetin 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-13934"],"termid":"GO:0102448"}


id: PBO:0083655
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Endonuclease I-SceII; encoded by a mobile group I intron within the mitochondrial COX1 gene; intron is normally spliced by the BI4p maturase but AI4p can mutate to acquire the same maturase activity","termid":"PBO:0083655"}


id: MONDO:0859286
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with hypotonia, language delay, and skeletal defects with or without seizures","secondary_identifiers":["MEDGEN:1823986","UMLS:C5774213","DOID:0070536","OMIM:620029"],"termid":"MONDO:0859286","xrefs":{"Monarch":{"xref_id":"0859286"}}}


id: GO:0051934
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The uptake of catecholamine neurotransmitters by neurons or glial cells. This process leads to inactivation and recycling of neurotransmitters.","definition_xrefs":["ISBN:0123668387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catecholamine uptake","termid":"GO:0090493"},{"relation_name":"is_a","term_name":"neurotransmitter reuptake","termid":"GO:0098810"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"catecholamine uptake involved in synaptic transmission","synonyms":[{"name":"catecholamine neurotransmitter import into glial cell","type":"narrow"},{"name":"catecholamine neurotransmitter import into neuron","type":"narrow"},{"name":"catecholamine neurotransmitter recycling","type":"broad"},{"name":"catecholamine neurotransmitter reuptake","type":"exact"},{"name":"catecholamine reuptake during transmission of nerve impulse","type":"related"},{"name":"catecholamine uptake during transmission of nerve impulse","type":"related"}],"termid":"GO:0051934"}


id: GO:0032379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the directed movement of lipids within cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of intracellular lipid transport","termid":"GO:0032377"},{"relation_name":"is_a","term_name":"positive regulation of intracellular transport","termid":"GO:0032388"},{"relation_name":"positively_regulates","term_name":"intracellular lipid transport","termid":"GO:0032365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of intracellular lipid transport","synonyms":[{"name":"activation of intracellular lipid transport","type":"narrow"},{"name":"stimulation of intracellular lipid transport","type":"narrow"},{"name":"up regulation of intracellular lipid transport","type":"exact"},{"name":"up-regulation of intracellular lipid transport","type":"exact"},{"name":"upregulation of intracellular lipid transport","type":"exact"}],"termid":"GO:0032379"}


id: PBO:0067187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 248, pseudogene","termid":"PBO:0067187"}


id: PBO:0046144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5 pseudogene 2","termid":"PBO:0046144"}


id: PBO:0051272
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa joining 3","termid":"PBO:0051272"}


id: MONDO:0004227
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, usually asymptomatic small mesothelial tumor that arises from the epididymis.","definition_xrefs":["NCIT:C6382","NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign mesothelioma","termid":"MONDO:0002373"},{"relation_name":"is_a","term_name":"adenomatoid tumor","termid":"MONDO:0004230"},{"relation_name":"is_a","term_name":"benign neoplasm of epididymis","termid":"MONDO:0021473"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epididymal adenomatoid tumor","secondary_identifiers":["DOID:745","MEDGEN:232460","SCTID:449052009","UMLS:C1333415"],"synonyms":[{"name":"adenomatoid neoplasm of epididymis","type":"exact"},{"name":"adenomatoid neoplasm of the epididymis","type":"exact"},{"name":"adenomatoid tumor of epididymis","type":"exact"},{"name":"adenomatoid tumor of the epididymis","type":"exact"},{"name":"adenomatoid tumour of epididymis","type":"exact"},{"name":"adenomatoid tumour of the epididymis","type":"exact"},{"name":"benign epididymal epithelial mesothelioma","type":"exact"},{"name":"epididymal adenomatoid tumor","type":"exact"},{"name":"epididymis adenomatoid tumor","type":"exact"},{"name":"epididymis adenomatoid tumour","type":"exact"}],"termid":"MONDO:0004227","xrefs":{"Monarch":{"xref_id":"0004227"}}}


id: PBO:0086372
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aryl-alcohol dehydrogenase; involved in oxidative stress response; similar to P. chrysosporium aryl-alcohol dehydrogenase; expression induced in cells treated with the mycotoxin patulin; members of the AAD gene family comprise three pairs (AAD3 + AAD15, AAD6/AAD16 + AAD4, AAD10 + AAD14) whose two genes are more related to one another than to other members of the family","termid":"PBO:0086372"}


id: PBO:0116418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein, human WDR7 ortholog, implicated vacuolar acidification, autophagy, or vacuole localization","termid":"PBO:0116418"}


id: PBO:0049392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP binding protein 6 (putative)","termid":"PBO:0049392"}


id: PBO:0108570
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Las1","termid":"PBO:0108570"}


id: MONDO:0021091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A serous or mucinous benign or low malignant potential cystic epithelial neoplasm. It is characterized by the presence of glandular epithelial cells forming papillary structures.","definition_xrefs":["NCIT:C2974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"papillary adenoma","termid":"MONDO:0002533"},{"relation_name":"is_a","term_name":"papillary cystic neoplasm","termid":"MONDO:0006349"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary cystadenoma","secondary_identifiers":["MESH:D018292","ICDO:8450/0","UMLS:C0010636","MEDGEN:41386"],"synonyms":[{"name":"cystadenoma, papillary, benign","type":"exact"},{"name":"papillary cystadenoma","type":"exact"}],"termid":"MONDO:0021091","xrefs":{"Monarch":{"xref_id":"0021091"}}}


id: GO:0060708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell of the ectoplacental cone acquires specialized features of a spongiotrophoblast of the placenta. A spongiotrophoblast cell is a basophilic cell.","definition_xrefs":["PMID:16269175","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation involved in embryonic placenta development","termid":"GO:0060706"},{"relation_name":"part_of","term_name":"spongiotrophoblast layer development","termid":"GO:0060712"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spongiotrophoblast differentiation","synonyms":[{"name":"spongiotrophoblast cell differentiation","type":"exact"}],"termid":"GO:0060708"}


id: PBO:0043349
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colipase like 2","termid":"PBO:0043349"}


id: GO:0120337
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the radial spoke 2 that is orthogonal to the elongated stalk and which projects towards the central pair of microtubules within the ciliary axoneme.","definition_xrefs":["GOC:krc","PMID:22754630","PMID:348711799"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke head","termid":"GO:0001535"},{"relation_name":"part_of","term_name":"radial spoke 2","termid":"GO:0120334"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005737"],"is_obsolete":false,"name":"radial spoke head 2","synonyms":[{"name":"radial spokehead 2","type":"exact"}],"termid":"GO:0120337"}


id: PBO:0036515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GET complex (ER membrane insertion) subunit Get4 (predicted)","termid":"PBO:0036515"}


id: PBO:0057795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3118-4","termid":"PBO:0057795"}


id: PBO:0074169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 35 member G6","termid":"PBO:0074169"}


id: PBO:0083898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG-nucleoporin component of central core of the nuclear pore complex; contributes directly to nucleocytoplasmic transport and maintenance of thenuclear pore complex (NPC) permeability barrier; possible karyopherin release factor that accelerates release of karyopherin-cargo complexes after transport across NPC; both NUP1 and NUP60 are homologous to human NUP153","termid":"PBO:0083898"}


id: PBO:0066575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras homolog, mTORC1 binding","termid":"PBO:0066575"}


id: MONDO:0010923
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"hereditary skeletal muscle disorder","termid":"MONDO:0700223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"proximal myopathy with focal depletion of mitochondria","secondary_identifiers":["MESH:C563453","MEDGEN:318881","GARD:17956","OMIM:600706","UMLS:C1833453","Orphanet:521305"],"synonyms":[{"name":"proximal myopathy with focal depletion of mitochondria","type":"exact"}],"termid":"MONDO:0010923","xrefs":{"Monarch":{"xref_id":"0010923"}}}


id: MONDO:0020742
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete cataract, microcephaly, failure to thrive, kyphoscoliosis syndrome (obsolete MONDO:0020742)","secondary_identifiers":["OMIM:212540","MESH:C537965","Orphanet:1317"],"synonyms":[{"name":"CAMAK syndrome","type":"related"},{"name":"CAMFAK syndrome","type":"related"},{"name":"cataract, microcephaly, arthrogryposis, kyphosis syndrome","type":"related"},{"name":"cataract, microcephaly, failure to thrive, kyphoscoliosis syndrome","type":"related"},{"name":"cataract-microcephaly-failure to thrive-kyphoscoliosis","type":"related"}],"termid":"MONDO:0020742","xrefs":{"Monarch":{"xref_id":"0020742"}}}


id: PBO:0073147
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC24 homolog A, COPII coat complex component","termid":"PBO:0073147"}


id: PBO:0090974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dolichyl-P-Man:Man(5)GlcNAc(2)-PP-Dol alpha-1,3-mannosyltransferase Alg3","termid":"PBO:0090974"}


id: MONDO:0006963
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that arises from the sebaceous glands. Representative examples include sebaceous adenoma and sebaceous carcinoma.","definition_xrefs":["NCIT:C3363"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermal appendage tumor","termid":"MONDO:0002297"},{"relation_name":"is_a","term_name":"sebaceous gland disorder","termid":"MONDO:0006607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"sebaceous gland neoplasm","secondary_identifiers":["ICD9:239.2","EFO:1001172","SCTID:126491004","DOID:5759","MEDGEN:19911","MESH:D012626","UMLS:C0036503"],"synonyms":[{"name":"neoplasm of sebaceous gland","type":"exact"},{"name":"sebaceous gland neoplasm","type":"exact"},{"name":"sebaceous gland neoplasm (disease)","type":"exact"},{"name":"sebaceous gland tumor","type":"exact"},{"name":"sebaceous gland tumour","type":"exact"},{"name":"sebaceous neoplasm","type":"exact"},{"name":"sebaceous tumor","type":"exact"},{"name":"sebaceous tumour","type":"exact"},{"name":"tumor of sebaceous gland","type":"exact"},{"name":"tumour of sebaceous gland","type":"exact"}],"termid":"MONDO:0006963","xrefs":{"Monarch":{"xref_id":"0006963"}}}


id: PBO:0003424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complexed with Cdc5 protein Cwf25","termid":"PBO:0003424"}


id: PBO:0058234
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4523","termid":"PBO:0058234"}


id: PBO:0045423
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"divergent-paired related homeobox pseudogene 3","termid":"PBO:0045423"}


id: GO:0097663
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An SCF ubiquitin ligase complex in which the F-box protein is Dia2 in S. cerevisiae (Pof3 in S. pombe).","definition_xrefs":["GOC:vw","PMID:14747994","PMID:15147268","GOC:jd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SCF ubiquitin ligase complex","termid":"GO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"SCF-Dia2/Pof3 ubiquitin ligase complex","termid":"GO:0097663"}


id: MONDO:0030355
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"facioscapulohumeral muscular dystrophy","termid":"MONDO:0001347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"facioscapulohumeral muscular dystrophy 4, digenic","secondary_identifiers":["DOID:0060918","MEDGEN:1794170","OMIM:619478","UMLS:C5561960"],"synonyms":[{"name":"FSHD4","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 4, digenic","type":"exact"},{"name":"facioscapulohumeral muscular dystrophy 4, digenic, digenic dominant","type":"exact"}],"termid":"MONDO:0030355","xrefs":{"Monarch":{"xref_id":"0030355"}}}


id: PBO:0054621
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2026","termid":"PBO:0054621"}


id: PBO:0017980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WISH/DIP/SPIN90 ortholog, endocytosis protein Dip1","termid":"PBO:0017980"}


id: SO:0000690
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that encodes a polycistronic transcript.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gene","termid":"SO:0000704"},{"relation_name":"transcribed_to","term_name":"polycistronic_transcript","termid":"SO:0000078"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gene_with_polycistronic_transcript","synonyms":[{"name":"gene with polycistronic transcript","type":"exact"}],"termid":"SO:0000690"}


id: MONDO:0015163
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete primary glomerular disease (obsolete MONDO:0015163)","secondary_identifiers":["Orphanet:102373"],"termid":"MONDO:0015163","xrefs":{"Monarch":{"xref_id":"0015163"}}}


id: PBO:0039400
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANAPC1 pseudogene 5","termid":"PBO:0039400"}


id: GO:1902373
data:
  {"annotated_genes":["SJAG_02573","SJAG_04946","SJAG_03696","SJAG_00797","SJAG_02370","SJAG_03883","SJAG_04825","SJAG_03283"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80658,92199,80698,102116],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070935"},{"annotations":[72585,91496],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0048255"},{"annotations":[91797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120271"},{"annotations":[93685],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060212"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of mRNA catabolic process.","definition_xrefs":["PMID:22626865","GOC:TermGenie","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gene expression","termid":"GO:0010628"},{"relation_name":"is_a","term_name":"regulation of mRNA catabolic process","termid":"GO:0061013"},{"relation_name":"is_a","term_name":"negative regulation of RNA catabolic process","termid":"GO:1902369"},{"relation_name":"is_a","term_name":"negative regulation of mRNA metabolic process","termid":"GO:1903312"},{"relation_name":"negatively_regulates","term_name":"mRNA catabolic process","termid":"GO:0006402"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00797":null,"SJAG_02370":null,"SJAG_02573":null,"SJAG_03283":null,"SJAG_03696":null,"SJAG_03883":null,"SJAG_04825":null,"SJAG_04946":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"negatively_regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0016071","GO:0010467"],"is_obsolete":false,"name":"negative regulation of mRNA catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of mRNA breakdown","type":"exact"},{"name":"down regulation of mRNA catabolic process","type":"exact"},{"name":"down regulation of mRNA catabolism","type":"exact"},{"name":"down regulation of mRNA decay","type":"related"},{"name":"down regulation of mRNA degradation","type":"exact"},{"name":"down-regulation of mRNA breakdown","type":"exact"},{"name":"down-regulation of mRNA catabolic process","type":"exact"},{"name":"down-regulation of mRNA catabolism","type":"exact"},{"name":"down-regulation of mRNA decay","type":"related"},{"name":"down-regulation of mRNA degradation","type":"exact"},{"name":"downregulation of mRNA breakdown","type":"exact"},{"name":"downregulation of mRNA catabolic process","type":"exact"},{"name":"downregulation of mRNA catabolism","type":"exact"},{"name":"downregulation of mRNA decay","type":"related"},{"name":"downregulation of mRNA degradation","type":"exact"},{"name":"inhibition of mRNA breakdown","type":"narrow"},{"name":"inhibition of mRNA catabolic process","type":"narrow"},{"name":"inhibition of mRNA catabolism","type":"narrow"},{"name":"inhibition of mRNA decay","type":"related"},{"name":"inhibition of mRNA degradation","type":"narrow"},{"name":"negative regulation of mRNA breakdown","type":"exact"},{"name":"negative regulation of mRNA catabolism","type":"exact"},{"name":"negative regulation of mRNA decay","type":"related"},{"name":"negative regulation of mRNA degradation","type":"exact"}],"termid":"GO:1902373","terms_by_termid":{"GO:0048255":null,"GO:0060212":null,"GO:0070935":null,"GO:0120271":null}}


id: PBO:0061340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPL4 homolog, ubiquitin recognition factor","termid":"PBO:0061340"}


id: PBO:0016054
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell Division Cycle","termid":"PBO:0016054"}


id: MONDO:1040007
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare congenital brain disorder characterized by complete or almost near-complete unilateral absence of the cortical cortex, which is filled by a sac of cerebrospinal fluid. The presumed cause is a prenatal vascular disruption with occlusion of the carotid artery territories ipsilateral to the damaged brain.","definition_xrefs":["PMID:23324549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydranencephaly","termid":"MONDO:0016344"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"hemihydranencephaly","secondary_identifiers":["UMLS:C0751210","icd11.foundation:642941159","MEDGEN:199609"],"synonyms":[{"name":"hemi-hydranencephaly","type":"exact"}],"termid":"MONDO:1040007","xrefs":{"Monarch":{"xref_id":"1040007"}}}


id: GO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dATP, deoxyadenosine triphosphate (2'-deoxyadenosine 5'-triphosphate).","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide biosynthetic process","termid":"GO:0009153"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate biosynthetic process","termid":"GO:0009216"},{"relation_name":"is_a","term_name":"dATP metabolic process","termid":"GO:0046060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"dATP biosynthetic process","synonyms":[{"name":"dATP anabolism","type":"exact"},{"name":"dATP biosynthesis","type":"exact"},{"name":"dATP formation","type":"exact"},{"name":"dATP synthesis","type":"exact"}],"termid":"GO:0006175"}


id: PBO:0084292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral vacuolar membrane protein; involved in vacuole inheritance and morphology; activates Fab1p kinase activity under basal conditions and also after hyperosmotic shock","termid":"PBO:0084292"}


id: PBO:0056241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog 2, pseudogene","termid":"PBO:0056241"}


id: GO:2000285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of regulation of excitatory postsynaptic membrane potential.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of regulation of excitatory postsynaptic membrane potential (obsolete GO:2000285)","synonyms":[{"name":"negative regulation of EPSP","type":"related"},{"name":"negative regulation of regulation of excitatory postsynaptic membrane potential","type":"exact"}],"termid":"GO:2000285"}


id: GO:0016652
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[69740],"is_not":false,"summary":null,"term":"GO:0016652"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which NADH or NADPH acts as a hydrogen or electron donor and reduces NAD+ or NADP.","definition_xrefs":["EC:1.6.1.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on NAD(P)H","termid":"GO:0016651"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on NAD(P)H as acceptor","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"oxidoreductase activity, acting on NAD or NADPH, NAD or NADP as acceptor","type":"related"}],"termid":"GO:0016652","terms_by_termid":{"GO:0016652":null}}


id: PBO:0065412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 20S subunit beta 1","termid":"PBO:0065412"}


id: PBO:0070501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6","termid":"PBO:0070501"}


id: GO:0102434
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 10-formyltetrahydrofolate-4a-carbinolamine = H2O + a 10-formyldihydrofolate.","definition_xrefs":["PMID:18245455","PMID:20959559","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"pterin-4alpha-carbinolamine dehydratase activity","secondary_identifiers":["MetaCyc:RXN-13908"],"termid":"GO:0102434"}


id: PBO:0088139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar protein component of the retromer; forms part of the multimeric membrane-associated retromer complex involved in vacuolar protein sorting along with Vps35p, Vps29p, Vps17p, and Vps5p; essential for endosome-to-Golgi retrograde protein transport; interacts with Ypt7p; protein abundance increases in response to DNA replication stress","termid":"PBO:0088139"}


id: PBO:0076226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPT7 like, STAGA complex subunit gamma","termid":"PBO:0076226"}


id: MONDO:0017386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An aggressive malignant mesenchymal neoplasm with skeletal muscle differentiation, occurring in adults and rarely in children. The tumor is characterized by the presence of bizarre round, spindle, and polygonal cells. Clinical presentation includes a rapidly enlarging painful mass usually of the lower extremities.","definition_xrefs":["NCIT:C4258"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhabdomyosarcoma","termid":"MONDO:0005212"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pleomorphic rhabdomyosarcoma","secondary_identifiers":["UMLS:C0334480","GARD:21165","ICD9:171.9","MEDGEN:137770","SCTID:404054005","Orphanet:293199","DOID:3250","ONCOTREE:PLRMS"],"synonyms":[{"name":"anaplastic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma","type":"exact"},{"name":"pleomorphic rhabdomyosarcoma, adult type","type":"exact"}],"termid":"MONDO:0017386","xrefs":{"Monarch":{"xref_id":"0017386"}}}


id: PBO:0003818
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Fep1","termid":"PBO:0003818"}


id: GO:0009086
data:
  {"annotated_genes":["SJAG_04042","SJAG_03152","SJAG_01466","SJAG_00309","SJAG_02689","SJAG_00395","SJAG_04425","SJAG_03712","SJAG_04459","SJAG_03614","SJAG_03671","SJAG_02972","SJAG_03881","SJAG_01404","SJAG_02290","SJAG_00881","SJAG_02293"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72870,73806,76506,81004,114026],"is_not":false,"summary":null,"term":"GO:0009086"},{"annotations":[62318,113146,70147,66992],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071266"},{"annotations":[102691],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019280"},{"annotations":[59412,79756,80300,82241,81158,78833],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019509"},{"annotations":[100536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019284"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of methionine (2-amino-4-(methylthio)butanoic acid), a sulfur-containing, essential amino acid found in peptide linkage in proteins.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid biosynthetic process","termid":"GO:0000097"},{"relation_name":"is_a","term_name":"methionine metabolic process","termid":"GO:0006555"},{"relation_name":"is_a","term_name":"aspartate family amino acid biosynthetic process","termid":"GO:0009067"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00309":null,"SJAG_00395":null,"SJAG_00881":null,"SJAG_01404":null,"SJAG_01466":null,"SJAG_02290":null,"SJAG_02293":null,"SJAG_02689":null,"SJAG_02972":null,"SJAG_03152":null,"SJAG_03614":null,"SJAG_03671":null,"SJAG_03712":null,"SJAG_03881":null,"SJAG_04042":null,"SJAG_04425":null,"SJAG_04459":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006790","GO:0006520","GO:0044281"],"is_obsolete":false,"name":"methionine biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"methionine anabolism","type":"exact"},{"name":"methionine biosynthesis","type":"exact"},{"name":"methionine formation","type":"exact"},{"name":"methionine synthesis","type":"exact"}],"termid":"GO:0009086","terms_by_termid":{"GO:0009086":null,"GO:0019280":null,"GO:0019284":null,"GO:0019509":null,"GO:0071266":null}}


id: PBO:0088667
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cohesin loading factor (adherin) Mis4/Scc2","termid":"PBO:0088667"}


id: PBO:0013053
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U2 snRNP-associated protein Sap130","termid":"PBO:0013053"}


id: PBO:0071990
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S6 pseudogene 19","termid":"PBO:0071990"}


id: SO:0001375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"3_2prime_O_dimethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"three_two_prime_O_dimethyluridine","secondary_identifiers":["RNAMOD:092"],"synonyms":[{"name":"3,2'-O-dimethyluridine","type":"exact"},{"name":"m3Um","type":"exact"},{"name":"three two prime O dimethyluridine","type":"exact"}],"termid":"SO:0001375"}


id: MONDO:0006816
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disorder of the joints.","definition_xrefs":["NCIT:C35760"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"bone inflammation disease","termid":"MONDO:0002614"},{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arthropathy","secondary_identifiers":["SCTID:399269003","DOID:381","ICD9:716.88","ICD9:711","ICD9:716.98","ICD9:719.88","MedDRA:10003285","MESH:D007592","ICD9:719.80","UMLS:C0022408","ICD9:716.9","ICD9:716.80","ICD9:719.89","ICD9:719.9","ICD9:716.90","ICD9:719.98","EFO:1000999","MEDGEN:7190","ICD9:719.90"],"synonyms":[{"name":"Joint ankylosis of the ankle and foot","type":"narrow"},{"name":"Joint ankylosis of the ankle and/or foot","type":"exact"},{"name":"Joint ankylosis of the forearm","type":"narrow"},{"name":"Joint ankylosis of the hand","type":"narrow"},{"name":"Joint ankylosis of the lower leg","type":"narrow"},{"name":"Joint ankylosis of the pelvic region and thigh","type":"narrow"},{"name":"Joint ankylosis of the shoulder region","type":"narrow"},{"name":"Joint ankylosis of the upper arm","type":"narrow"},{"name":"Joint disorder","type":"exact"},{"name":"ankylosis of ankle and foot joint","type":"narrow"},{"name":"ankylosis of forearm joint","type":"narrow"},{"name":"ankylosis of hand joint","type":"narrow"},{"name":"ankylosis of joint of ankle and/or foot","type":"exact"},{"name":"ankylosis of joint of forearm","type":"exact"},{"name":"ankylosis of joint of hand","type":"exact"},{"name":"ankylosis of joint of lower leg","type":"exact"},{"name":"ankylosis of joint of multiple sites","type":"narrow"},{"name":"ankylosis of joint of pelvic region and thigh","type":"narrow"},{"name":"ankylosis of joint of shoulder region","type":"narrow"},{"name":"ankylosis of joint of upper arm","type":"exact"},{"name":"ankylosis of lower leg joint","type":"narrow"},{"name":"ankylosis of multiple joints","type":"narrow"},{"name":"ankylosis of upper arm joint","type":"narrow"},{"name":"arthropathy","type":"exact"},{"name":"arthrosis","type":"related"},{"name":"disease of skeletal joint","type":"exact"},{"name":"disease or disorder of skeletal joint","type":"exact"},{"name":"disorder of joint","type":"related"},{"name":"disorder of skeletal joint","type":"exact"},{"name":"disorder, Joint","type":"exact"},{"name":"infectious arthropathy","type":"narrow"},{"name":"joint disease","type":"related"},{"name":"joint disorder","type":"related"},{"name":"skeletal joint disease","type":"exact"},{"name":"skeletal joint disease or disorder","type":"exact"}],"termid":"MONDO:0006816","xrefs":{"Monarch":{"xref_id":"0006816"}}}


id: GO:0046088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of cytidine, cytosine riboside, a widely distributed nucleoside.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete cytidine biosynthetic process (obsolete GO:0046088)","synonyms":[{"name":"cytidine anabolism","type":"exact"},{"name":"cytidine biosynthesis","type":"exact"},{"name":"cytidine formation","type":"exact"},{"name":"cytidine synthesis","type":"exact"}],"termid":"GO:0046088"}


id: PBO:0001797
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-factor precursor","termid":"PBO:0001797"}


id: MONDO:0009992
data:
  {"annotated_genes":["SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89057],"is_not":false,"summary":null,"term":"MONDO:0009992"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary recurrent myoglobinuria","termid":"MONDO:0020504"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"myoglobinuria, acute recurrent, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:340308","GARD:18251","UMLS:C1849386","MESH:C564832","OMIM:268200"],"synonyms":[{"name":"myoglobinuria, acute recurrent, autosomal recessive","type":"exact"},{"name":"myoglobinuria, familial paroxysmal paralytic","type":"related"},{"name":"rhabdomyolysis, acute recurrent","type":"related"}],"termid":"MONDO:0009992","terms_by_termid":{"MONDO:0009992":null},"xrefs":{"Monarch":{"xref_id":"0009992"}}}


id: GO:0008471
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4 benzenediol + O2 = 4 benzosemiquinone + 2 H2O.","definition_xrefs":["EC:1.10.3.2"],"gene_count":0,"genotype_count":0,"name":"obsolete laccase activity (obsolete GO:0008471)","synonyms":[{"name":"benzenediol:oxygen oxidoreductase activity","type":"related"},{"name":"laccase activity","type":"exact"},{"name":"p-diphenol oxidase activity","type":"related"},{"name":"urishiol oxidase activity","type":"related"},{"name":"urushiol oxidase activity","type":"related"}],"termid":"GO:0008471"}


id: PBO:0086135
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for meiotic recombination and gene conversion; null mutant displays reduced PIS1 expression and growth defects on non-fermentable carbon sources and minimal media; GFP-fusion protein localizes to both cytoplasm and nucleus","termid":"PBO:0086135"}


id: MONDO:0001556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Blockage of the normal flow of urine in the urethra.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urethral disorder","termid":"MONDO:0004184"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urethral obstruction","secondary_identifiers":["ICD9:599.69","DOID:12577","HP:0000796","MEDGEN:12015","SCTID:95588004","UMLS:C0041972","MESH:D014524"],"synonyms":[{"name":"obstruction of urethra","type":"exact"},{"name":"urethral obstruction","type":"exact"},{"name":"urethral obstruction (disease)","type":"exact"}],"termid":"MONDO:0001556","xrefs":{"Monarch":{"xref_id":"0001556"}}}


id: FYPO:0006767
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a cyclin-dependent protein kinase activity is increased during the meiotic cell cycle, in cells that have not arrested the meiotic cell cycle under conditions that normally trigger meiotic DNA replication checkpoint signaling and response.","definition_xrefs":["PomBase:mah","PMID:10521402"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cyclin-dependent protein kinase activity","termid":"FYPO:0004319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000661","FYPO:0000654","FYPO:0001985"],"is_obsolete":false,"name":"increased cyclin-dependent protein kinase activity in absence of meiotic DNA replication checkpoint arrest","synonyms":[{"name":"increased cyclin-dependent protein kinase activity with abolished meiotic DNA replication checkpoint arrest","type":"exact"}],"termid":"FYPO:0006767"}


id: PBO:0121012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNRC2 pseudogene 3","termid":"PBO:0121012"}


id: PBO:0075798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SS18L1 subunit of BAF chromatin remodeling complex","termid":"PBO:0075798"}


id: GO:0070254
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of mucus by the mucosa. Mucus is a viscous slimy secretion consisting of mucins and various inorganic salts dissolved in water, with suspended epithelial cells and leukocytes. The mucosa, or mucous membrane, is the membrane covered with epithelium that lines the tubular organs of the body. Mucins are carbohydrate-rich glycoproteins that have a lubricating and protective function.","definition_xrefs":["ISBN:0721662544","GOC:add","ISBN:068340007X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"body fluid secretion","termid":"GO:0007589"},{"relation_name":"is_a","term_name":"secretion by tissue","termid":"GO:0032941"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"mucus secretion","synonyms":[{"name":"mucus production","type":"exact"}],"termid":"GO:0070254"}


id: PR:Q96WV9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdk9 gene.","definition_xrefs":["UniProtKB:Q96WV9","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin-dependent kinase 9 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.10","synonyms":[{"name":"Spom972h-cdk9","type":"exact"},{"name":"cell division protein kinase 9 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q96WV9"}


id: PBO:0027525
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_ribosomal_S6_protein_phosphorylation","termid":"PBO:0027525"}


id: GO:1905612
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of mRNA cap binding.","definition_xrefs":["GOC:bc","GO_REF:0000059","GOC:TermGenie","GOC:PARL","PMID:23409027"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of mRNA cap binding (obsolete GO:1905612)","synonyms":[{"name":"activation of mRNA cap binding","type":"narrow"},{"name":"up regulation of mRNA cap binding","type":"exact"},{"name":"up-regulation of mRNA cap binding","type":"exact"},{"name":"upregulation of mRNA cap binding","type":"exact"}],"termid":"GO:1905612"}


id: PBO:0072688
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RUNX family transcription factor 1","termid":"PBO:0072688"}


id: MONDO:1011068
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in Silvery lutung.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, Silvery lutung","secondary_identifiers":["OMIA:001033-122765"],"termid":"MONDO:1011068","xrefs":{"Monarch":{"xref_id":"1011068"}}}


id: GO:0032601
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The appearance of connective tissue growth factor due to biosynthesis or secretion following a cellular stimulus, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine production","termid":"GO:0001816"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"connective tissue growth factor production","synonyms":[{"name":"CCN2 production","type":"exact"},{"name":"CTGF production","type":"exact"},{"name":"Fisp12 production","type":"exact"},{"name":"Hcs24 production","type":"exact"},{"name":"IGFBP8 production","type":"exact"},{"name":"hypertrophic chondrocyte-specific gene product 24 production","type":"exact"}],"termid":"GO:0032601"}


id: PBO:0080331
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 95 pseudogene","termid":"PBO:0080331"}


id: MONDO:0800346
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"left ventricular noncompaction","termid":"MONDO:0018901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"left ventricular noncompaction 9","secondary_identifiers":["MEDGEN:814475","UMLS:C3808145"],"synonyms":[{"name":"LVNC9","type":"exact"}],"termid":"MONDO:0800346","xrefs":{"Monarch":{"xref_id":"0800346"}}}


id: PBO:0031576
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_DNA_integrity_checkpoint","termid":"PBO:0031576"}


id: GO:0032960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of inositol trisphosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of inositol phosphate biosynthetic process","termid":"GO:0010919"},{"relation_name":"regulates","term_name":"inositol trisphosphate biosynthetic process","termid":"GO:0032959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of inositol trisphosphate biosynthetic process","synonyms":[{"name":"regulation of IP3 biosynthesis","type":"exact"},{"name":"regulation of IP3 biosynthetic process","type":"exact"},{"name":"regulation of inositol trisphosphate anabolism","type":"exact"},{"name":"regulation of inositol trisphosphate biosynthesis","type":"exact"},{"name":"regulation of inositol trisphosphate formation","type":"exact"},{"name":"regulation of inositol trisphosphate synthesis","type":"exact"},{"name":"regulation of myo-inositol trisphosphate biosynthesis","type":"narrow"},{"name":"regulation of myo-inositol trisphosphate biosynthetic process","type":"narrow"}],"termid":"GO:0032960"}


id: internal:is_a
data:
  {"annotation_feature_type":"gene","cv_name":"autocreated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_a","termid":"internal:is_a"}


id: MONDO:0100170
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing restless legs syndrome.","definition_xrefs":["MONDO:patterns/inherited_susceptibility"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"restless legs syndrome, susceptibility to","secondary_identifiers":["OMIMPS:102300"],"termid":"MONDO:0100170","xrefs":{"Monarch":{"xref_id":"0100170"}}}


id: PBO:0120473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDI proteasomal shuttling factor 1","termid":"PBO:0120473"}


id: GO:0051124
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a synapse at a neuromuscular junction.","definition_xrefs":["PMID:20215342"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse assembly","termid":"GO:0007416"},{"relation_name":"is_a","term_name":"neuromuscular junction development","termid":"GO:0007528"},{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"synaptic assembly at neuromuscular junction","synonyms":[{"name":"cholinergic synaptogenesis","type":"related"},{"name":"synaptic growth at neuromuscular junction","type":"related"}],"termid":"GO:0051124"}


id: PBO:0056416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARCHF11 antisense RNA 1","termid":"PBO:0056416"}


id: GO:1902399
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in G1 DNA damage checkpoint.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in G1 DNA damage checkpoint (obsolete GO:1902399)","synonyms":[{"name":"detection of stimulus involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"perception of stimulus involved in G1 DNA damage checkpoint","type":"related"},{"name":"perception of stimulus involved in G1/S DNA damage checkpoint","type":"related"},{"name":"stimulus detection involved in G1 DNA damage checkpoint","type":"exact"},{"name":"stimulus detection involved in G1/S DNA damage checkpoint","type":"exact"},{"name":"stimulus sensing involved in G1 DNA damage checkpoint","type":"related"},{"name":"stimulus sensing involved in G1/S DNA damage checkpoint","type":"related"}],"termid":"GO:1902399"}


id: SO:0001455
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A relatively rare amino acid encoded by the codon UGA in some contexts, whereas UGA is a termination codon in other contexts.","definition_xrefs":["PMID:23275319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"selenocysteine","synonyms":[{"name":"Sec","type":"exact"},{"name":"U","type":"exact"}],"termid":"SO:0001455"}


id: GO:0039708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The assembly of a virus capsid that occurs in the nucleus. The assembly of large icosahedral shells for herpesviridae and adenoviridae requires structural proteins that act as chaperones for assembly.","definition_xrefs":["VZ:1516"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral capsid assembly","termid":"GO:0019069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear capsid assembly","termid":"GO:0039708"}


id: PBO:0120779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"jagunal vesicle mediated transporter 1","termid":"PBO:0120779"}


id: PBO:0079802
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP glucuronosyltransferase family 2 member B17","termid":"PBO:0079802"}


id: MONDO:0007414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gorham-Stout disease (GSD) is a rare disease of massive osteolysis associated with proliferation and dilation of lymphatic vessels. GSD may affect any bone in the body and can be monostotic or polyostotic. Symptoms at presentation are dependent upon the location(s) of the disease; the most common symptom is localized pain. The disease may be discovered after a pathological fracture.","definition_xrefs":["Orphanet:73"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"},{"relation_name":"is_a","term_name":"disappearing bone disease","termid":"MONDO:0003157"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Gorham-Stout disease","secondary_identifiers":["NANDO:1200880","GARD:6542","OMIM:123880","NORD:1200","MEDGEN:45248","MedDRA:10071283","NANDO:1200878","ICD9:733.99","SCTID:1515008","UMLS:C0029438","icd11.foundation:1318015458"],"synonyms":[{"name":"Gorham disease","type":"exact"},{"name":"Gorham syndrome","type":"exact"},{"name":"Gorham-Stout disease","type":"exact"},{"name":"cystic angiomatosis of bone diffuse","type":"related"},{"name":"cystic angiomatosis of bone, diffuse","type":"related"},{"name":"idiopathic massive osteolysis","type":"exact"},{"name":"osteolysis massive","type":"related"},{"name":"osteolysis, massive","type":"related"},{"name":"progressive massive osteolysis","type":"exact"},{"name":"vanishing bone disease","type":"exact"}],"termid":"MONDO:0007414","xrefs":{"Monarch":{"xref_id":"0007414"}}}


id: PBO:0040582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRISC and BRCA1 A complex member 1","termid":"PBO:0040582"}


id: PBO:0002408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidase family A22","termid":"PBO:0002408"}


id: MOD:01985
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-asparagine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-asparagine.","definition_xrefs":["RESID:AA0622","PubMed:21786372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked D-asparagine residue","termid":"MOD:02060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-asparagine","synonyms":[{"name":"(2S)-2,4-diamino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-4-oxobutanoic acid","type":"exact"},{"name":"alpha-(L-cystein-S-yl)-D-asparagine","type":"exact"}],"termid":"MOD:01985"}


id: GO:0018237
data:
  {"annotated_genes":["SJAG_04679","SJAG_04896","SJAG_05338"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73786,78876,78916],"is_not":false,"summary":null,"term":"GO:0018237"}]},"cv_name":"molecular_function","definition":"Increases the activity of urease by promoting the incorporation of nickel into the active site.","definition_xrefs":["PMID:16244137","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"}],"gene_count":3,"genes_by_uniquename":{"SJAG_04679":null,"SJAG_04896":null,"SJAG_05338":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0030234","GO:0140677","GO:0098772","GO:0003674"],"is_obsolete":false,"name":"urease activator activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"urease activase activity","type":"exact"}],"termid":"GO:0018237","terms_by_termid":{"GO:0018237":null}}


id: GO:1902708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a plumbagin stimulus.","definition_xrefs":["GOC:TermGenie","GO_REF:0000071","PMID:23028742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to plumbagin","termid":"GO:1902708"}


id: PBO:0018150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy associated sorting nexin Atg20 (predicted)","termid":"PBO:0018150"}


id: GO:0006204
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of IMP, inosine monophosphate.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide catabolic process","termid":"GO:0009154"},{"relation_name":"is_a","term_name":"purine ribonucleoside monophosphate catabolic process","termid":"GO:0009169"},{"relation_name":"is_a","term_name":"IMP metabolic process","termid":"GO:0046040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"IMP catabolic process","synonyms":[{"name":"IMP breakdown","type":"exact"},{"name":"IMP catabolism","type":"exact"},{"name":"IMP degradation","type":"exact"}],"termid":"GO:0006204"}


id: PBO:0028823
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_microtubule_cytoskeleton_morphology","termid":"PBO:0028823"}


id: PBO:0061830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxoglutarate dehydrogenase","termid":"PBO:0061830"}


id: PBO:0091880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA nam3","termid":"PBO:0091880"}


id: FYPO:0002436
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the orientation of actin cables within a cell is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cables","termid":"FYPO:0002435"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0004803"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"misoriented actin cables","synonyms":[{"name":"abnormal actin cable orientation","type":"exact"},{"name":"abnormal formin-nucleated actin cable orientation","type":"exact"},{"name":"misoriented actin cables during mitotic cell cycle","type":"related"},{"name":"misoriented actin cables during vegetative growth","type":"exact"},{"name":"misoriented formin-nucleated actin cables","type":"exact"}],"termid":"FYPO:0002436"}


id: PBO:0000334
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ran GTPase binding protein (predicted)","termid":"PBO:0000334"}


id: GO:0052801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving bicyclic nitroimidazoles, imidazole derivatives with two rings and a nitro group attached to one ring.","definition_xrefs":["PMID:19039139","PMID:16387854"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitroimidazole metabolic process","termid":"GO:0052802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"bicyclic nitroimidazole metabolic process","synonyms":[{"name":"bicyclic nitroimidazole metabolism","type":"exact"}],"termid":"GO:0052801"}


id: MONDO:0005802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A parasitic infection caused by tapeworms. Most infected individuals do not have symptoms. When symptoms appear, they include diarrhea, abdominal pain, restlessness, and irritability.","definition_xrefs":["NCIT:C84768"],"direct_ancestors":[{"relation_name":"is_a","term_name":"helminthiasis","termid":"MONDO:0004664"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hymenolepiasis","secondary_identifiers":["EFO:0007317","MedDRA:10020546","icd11.foundation:2028864113","ICD9:123.6","MEDGEN:43772","UMLS:C0020413","GARD:2787","MESH:D006925","DOID:10074","ICD10CM:B71.0","Orphanet:401","SCTID:44917000"],"synonyms":[{"name":"Hymenolepis infectious disease","type":"exact"},{"name":"Hymenolepsis infection","type":"related"},{"name":"dwarf tapeworm infection","type":"exact"},{"name":"hymenolepiasis","type":"exact"}],"termid":"MONDO:0005802","xrefs":{"Monarch":{"xref_id":"0005802"}}}


id: GO:0019634
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phosphonates, any organic compounds containing one or more C-PO(OH)2 or C-PO(OR)2 (with R=alkyl, aryl) groups. Metabolism of phosphonic acid itself, an inorganic compound without the biochemically relevant C-P bond, is not included.","definition_xrefs":["GOC:js","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorus metabolic process","termid":"GO:0006793"},{"relation_name":"is_a","term_name":"oxoacid metabolic process","termid":"GO:0043436"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"organic phosphonate metabolic process","synonyms":[{"name":"organophosphonate metabolic process","type":"related"},{"name":"phosphonate metabolism","type":"exact"}],"termid":"GO:0019634"}


id: PBO:0026651
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_chromatin_binding_during_cellular_response_to_hydroxyurea","termid":"PBO:0026651"}


id: GO:0047431
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 5-hydroxy-6-methylpyridine-3,4-dicarboxylate + H+ = 5-hydroxy-6-methylpyridine-3-carboxylate + CO2.","definition_xrefs":["RHEA:13669","EC:4.1.1.51"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-decarboxylase activity","secondary_identifiers":["KEGG_REACTION:R03461","MetaCyc:4.1.1.51-RXN"],"synonyms":[{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase (3-hydroxy-2-methylpyridine-5-carboxylate-forming)","type":"related"},{"name":"3-hydroxy-2-methylpyridine-4,5-dicarboxylate 4-carboxy-lyase activity","type":"related"}],"termid":"GO:0047431"}


id: GO:0120546
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which a reducing C-O-C group acts as acceptor.","definition_xrefs":["EC:1.23.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity","termid":"GO:0016491"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"oxidoreductase activity, reducing C-O-C group as acceptor","termid":"GO:0120546"}


id: MONDO:0030015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bone marrow failure syndrome","termid":"MONDO:0000159"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"bone marrow failure syndrome 6","secondary_identifiers":["MEDGEN:1717739","OMIM:618849","UMLS:C5394274"],"synonyms":[{"name":"BMFS6","type":"exact"},{"name":"BONE MARROW FAILURE SYNDROME 6","type":"exact"},{"name":"bone marrow failure syndrome 6","type":"exact"}],"termid":"MONDO:0030015","xrefs":{"Monarch":{"xref_id":"0030015"}}}


id: PBO:0035865
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_protein_movement_within_plasma_membrane_at_cell_side","termid":"PBO:0035865"}


id: FYPO:0005166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the spatio-temporal pattern of localization of replication forks into nuclear foci is normal (i.e. indistinguishable from wild type). Normally, replication forks appear organized into foci outside the nucleolus in early S phase. As S phase progresses, the number of foci first increases, then decreases, and the remaining foci concentrate within the nucleolus or at the nucleolar periphery. The last replication foci remaining at the end of S phase are one or two large spots at the nucleolar border.","definition_xrefs":["PomBase:mah","PMID:17304223"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal spatio-temporal regulation of replication fork localization","synonyms":[{"name":"normal replication foci dynamics","type":"related"},{"name":"normal replication focus organization","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localisation","type":"exact"},{"name":"normal spatio-temporal regulation of replication fork localization during mitotic cell cycle","type":"related"},{"name":"normal spatio-temporal regulation of replication fork localization during vegetative growth","type":"exact"},{"name":"normal spatio-temporal replication fork organization","type":"related"}],"termid":"FYPO:0005166"}


id: MONDO:0008283
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cronkhite-Canada syndrome (CCS) is a rare gastrointestinal (GI) polyposis syndrome characterized by the association of non-hereditary GI polyposis with the cutaneous triad of alopecia, nail changes and hyperpigmentation.","definition_xrefs":["Orphanet:2930"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"gastric hamartomatous polyp","termid":"MONDO:0006224"},{"relation_name":"is_a","term_name":"digestive system disorder","termid":"MONDO:0004335"},{"relation_name":"is_a","term_name":"intestinal polyposis syndrome","termid":"MONDO:0015185"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005093"],"is_obsolete":false,"name":"Cronkhite-Canada syndrome","secondary_identifiers":["MEDGEN:129128","MedDRA:10062907","NANDO:1200901","NCIT:C7035","NORD:1017","GARD:4427","UMLS:C0282207","MESH:D044483","OMIM:175500","icd11.foundation:79007466","SCTID:76304001","DOID:6225"],"synonyms":[{"name":"Cronkhite-Canada disease","type":"related"},{"name":"Cronkhite-Canada syndrome","type":"exact"},{"name":"gastric Cronkhite Canada polyposis","type":"exact"},{"name":"gastrointestinal polyposis-ectodermal changes syndrome","type":"exact"},{"name":"gastrointestinal polyposis-skin pigmentation-alopecia-fingernail changes syndrome","type":"exact"},{"name":"polyposis skin pigmentation alopecia fingernail changes","type":"related"},{"name":"polyposis, skin pigmentation, alopecia, and fingernail changes","type":"related"}],"termid":"MONDO:0008283","xrefs":{"Monarch":{"xref_id":"0008283"}}}


id: MONDO:0100054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Idiopathic anaphylaxis is a rare form of anaphylaxis for which triggers cannot be identified despite a detailed history and careful diagnostic assessment.","definition_xrefs":["PMID:28890861"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anaphylaxis","termid":"MONDO:0100053"},{"relation_name":"is_a","term_name":"idiopathic disease","termid":"MONDO:0700007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"idiopathic anaphylaxis","secondary_identifiers":["SCTID:241954008","MEDGEN:595022","UMLS:C0413235"],"termid":"MONDO:0100054","xrefs":{"Monarch":{"xref_id":"0100054"}}}


id: MONDO:0011311
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete glaucoma 1, open angle, F (obsolete MONDO:0011311)","secondary_identifiers":["MESH:C566383","OMIM:603383"],"synonyms":[{"name":"GLC1F","type":"related"},{"name":"glaucoma 1, open angle, F","type":"exact"},{"name":"glaucoma 1, open angle, type F","type":"exact"},{"name":"glaucoma, primary open angle, adult-onset","type":"related"}],"termid":"MONDO:0011311","xrefs":{"Monarch":{"xref_id":"0011311"}}}


id: GO:0060545
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of a necroptotic process, a necrotic cell death process that results from the activation of endogenous cellular processes, such as signaling involving death domain receptors or Toll-like receptors.","definition_xrefs":["GOC:dph","GOC:mtg_apoptosis","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of necroptotic process","termid":"GO:0060544"},{"relation_name":"is_a","term_name":"positive regulation of programmed necrotic cell death","termid":"GO:0062100"},{"relation_name":"positively_regulates","term_name":"necroptotic process","termid":"GO:0070266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of necroptotic process","synonyms":[{"name":"positive regulation of necroptosis","type":"narrow"}],"termid":"GO:0060545"}


id: GO:0002649
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of tolerance induction to self antigen.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tolerance induction","termid":"GO:0002643"},{"relation_name":"regulates","term_name":"tolerance induction to self antigen","termid":"GO:0002513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tolerance induction to self antigen","termid":"GO:0002649"}


id: GO:0034141
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of toll-like receptor 3 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 3 signaling pathway","termid":"GO:0034139"},{"relation_name":"is_a","term_name":"positive regulation of pattern recognition receptor signaling pathway","termid":"GO:0062208"},{"relation_name":"is_a","term_name":"positive regulation of intracellular signal transduction","termid":"GO:1902533"},{"relation_name":"positively_regulates","term_name":"toll-like receptor 3 signaling pathway","termid":"GO:0034138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"positively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of toll-like receptor 3 signaling pathway","synonyms":[{"name":"positive regulation of TLR3 signaling pathway","type":"exact"},{"name":"positive regulation of toll-like receptor 3 signalling pathway","type":"exact"}],"termid":"GO:0034141"}


id: GO:0045771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that reduces autophagosome size.","definition_xrefs":["GOC:autophagy","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of autophagosome size","termid":"GO:0016243"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006914"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006914","GO:0008150"],"is_obsolete":false,"name":"negative regulation of autophagosome size","synonyms":[{"name":"down regulation of autophagic vacuole size","type":"exact"},{"name":"down-regulation of autophagic vacuole size","type":"exact"},{"name":"downregulation of autophagic vacuole size","type":"exact"},{"name":"inhibition of autophagic vacuole size","type":"narrow"},{"name":"negative regulation of autophagic vacuole size","type":"exact"}],"termid":"GO:0045771"}


id: PBO:0051421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 2-28 (pseudogene)","termid":"PBO:0051421"}


id: MONDO:0018451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. X-linked form of distal hereditary motor neuropathy.","definition_xrefs":["MONDO:patterns/x_linked"],"gene_count":0,"genotype_count":0,"name":"obsolete X-linked distal hereditary motor neuropathy (obsolete MONDO:0018451)","secondary_identifiers":["Orphanet:404538"],"synonyms":[{"name":"X-linked dHMN","type":"exact"},{"name":"X-linked distal spinal muscular atrophy","type":"exact"},{"name":"distal hereditary motor neuropathy, X-linked","type":"exact"}],"termid":"MONDO:0018451","xrefs":{"Monarch":{"xref_id":"0018451"}}}


id: PBO:0066694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enriched in melanoma 3","termid":"PBO:0066694"}


id: PR:O14144
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- erv1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial FAD-linked sulfhydryl oxidase erv1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3G6.08","synonyms":[{"name":"Spom972h-erv1","type":"exact"}],"termid":"PR:O14144"}


