# terms

id: GO:0008607
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Modulation of the activity of the enzyme phosphorylase kinase.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase regulator activity","termid":"GO:0019887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"phosphorylase kinase regulator activity","synonyms":[{"name":"phosphorylase kinase, intrinsic regulator activity","type":"narrow"}],"termid":"GO:0008607"}


id: MONDO:0012182
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"skeletal dysplasia, rhizomelic, with retinitis pigmentosa","secondary_identifiers":["MESH:C563806","MEDGEN:332318","OMIM:609047","UMLS:C1836898"],"synonyms":[{"name":"skeletal dysplasia, rhizomelic, with retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0012182","xrefs":{"Monarch":{"xref_id":"0012182"}}}


id: PBO:0070480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 15","termid":"PBO:0070480"}


id: MONDO:0021547
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypocalcified amelogenesis imperfecta","termid":"MONDO:0968955"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 3B","secondary_identifiers":["OMIM:617607","MEDGEN:1621302","UMLS:C4539891","DOID:0080243","GARD:18258"],"synonyms":[{"name":"AI3B","type":"exact"},{"name":"amelogenesis imperfecta, type 3B","type":"exact"},{"name":"amelogenesis imperfecta, type IIIB","type":"exact"}],"termid":"MONDO:0021547","xrefs":{"Monarch":{"xref_id":"0021547"}}}


id: PBO:0069781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1066, pseudogene","termid":"PBO:0069781"}


id: GO:0019772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with low affinity with an immunoglobulin of an IgG isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IgG receptor activity","termid":"GO:0019770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"low-affinity IgG receptor activity","synonyms":[{"name":"low affinity Fc receptor activity","type":"related"},{"name":"low affinity IgG receptor activity","type":"exact"}],"termid":"GO:0019772"}


id: GO:1902690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of NAD metabolic process.","definition_xrefs":["GOC:di","GOC:TermGenie","PMID:19846558","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of purine nucleotide metabolic process","termid":"GO:1900544"},{"relation_name":"is_a","term_name":"regulation of NAD metabolic process","termid":"GO:1902688"},{"relation_name":"positively_regulates","term_name":"NAD+ metabolic process","termid":"GO:0019674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"positive regulation of NAD metabolic process","synonyms":[{"name":"activation of NAD (oxidized) metabolic process","type":"narrow"},{"name":"activation of NAD (oxidized) metabolism","type":"narrow"},{"name":"activation of NAD metabolic process","type":"narrow"},{"name":"activation of NAD metabolism","type":"narrow"},{"name":"activation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"activation of nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"activation of nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"activation of oxidized NAD metabolic process","type":"narrow"},{"name":"activation of oxidized NAD metabolism","type":"narrow"},{"name":"activation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"narrow"},{"name":"activation of oxidized nicotinamide adenine dinucleotide metabolism","type":"narrow"},{"name":"positive regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"positive regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"positive regulation of NAD metabolism","type":"exact"},{"name":"positive regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"positive regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"positive regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"positive regulation of oxidized NAD metabolic process","type":"exact"},{"name":"positive regulation of oxidized NAD metabolism","type":"exact"},{"name":"positive regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"positive regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"up regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"up regulation of NAD metabolic process","type":"exact"},{"name":"up regulation of NAD metabolism","type":"exact"},{"name":"up regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"up regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up regulation of oxidized NAD metabolic process","type":"exact"},{"name":"up regulation of oxidized NAD metabolism","type":"exact"},{"name":"up regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up-regulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"up-regulation of NAD (oxidized) metabolism","type":"exact"},{"name":"up-regulation of NAD metabolic process","type":"exact"},{"name":"up-regulation of NAD metabolism","type":"exact"},{"name":"up-regulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"up-regulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up-regulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"up-regulation of oxidized NAD metabolic process","type":"exact"},{"name":"up-regulation of oxidized NAD metabolism","type":"exact"},{"name":"up-regulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"up-regulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"upregulation of NAD (oxidized) metabolic process","type":"exact"},{"name":"upregulation of NAD (oxidized) metabolism","type":"exact"},{"name":"upregulation of NAD metabolic process","type":"exact"},{"name":"upregulation of NAD metabolism","type":"exact"},{"name":"upregulation of NAD phosphorylation and dephosphorylation","type":"narrow"},{"name":"upregulation of nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"upregulation of nicotinamide adenine dinucleotide metabolism","type":"exact"},{"name":"upregulation of oxidized NAD metabolic process","type":"exact"},{"name":"upregulation of oxidized NAD metabolism","type":"exact"},{"name":"upregulation of oxidized nicotinamide adenine dinucleotide metabolic process","type":"exact"},{"name":"upregulation of oxidized nicotinamide adenine dinucleotide metabolism","type":"exact"}],"termid":"GO:1902690"}


id: PBO:0071714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L39 pseudogene 12","termid":"PBO:0071714"}


id: MOD:01286
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-isoleucine residue to 6x(13)C,1x(15)N isotope labeled L-isoleucine.","definition_xrefs":["PubMed:11999733","PubMed:11857757","PubMed:12175151","Unimod:695#I"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-isoleucine residue","termid":"MOD:00910"},{"relation_name":"is_a","term_name":"6x(13)C,1x(15)N labeled residue","termid":"MOD:01370"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6x(13)C,1x(15)N labeled L-isoleucine","synonyms":[{"name":"13C(6) 15N(1) Silac label","type":"related"},{"name":"Label:13C(6)15N(1)","type":"related"}],"termid":"MOD:01286"}


id: MONDO:0007011
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A manifestation of sarcoidosis marked by chronic inflammation of the parotid gland and the uvea.","definition_xrefs":["MESH:D014608"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sarcoidosis","termid":"MONDO:0019338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uveoparotid fever","secondary_identifiers":["MEDGEN:22600","SCTID:4416007","icd11.foundation:2079034902","UMLS:C0042171","DOID:13404","SCTID:31541009","EFO:1001232"],"synonyms":[{"name":"Heerfordt's syndrome","type":"exact"},{"name":"uveoparotid fever","type":"exact"}],"termid":"MONDO:0007011","xrefs":{"Monarch":{"xref_id":"0007011"}}}


id: PBO:0086474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; identified by expression profiling and mass spectrometry","termid":"PBO:0086474"}


id: PBO:0089085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"short chain dehydrogenase,  human DHRS7 family","termid":"PBO:0089085"}


id: GO:0035071
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The stage-specific programmed cell death of salivary gland cells during salivary gland histolysis.","definition_xrefs":["PMID:10882130","GOC:bf","GOC:mtg_apoptosis"],"gene_count":0,"genotype_count":0,"name":"obsolete salivary gland cell autophagic cell death (obsolete GO:0035071)","termid":"GO:0035071"}


id: PBO:0062335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 74","termid":"PBO:0062335"}


id: PBO:0052384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 25","termid":"PBO:0052384"}


id: MONDO:0018973
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary macular dystrophy","termid":"MONDO:0020242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"patterned dystrophy of the retinal pigment epithelium","secondary_identifiers":["MEDGEN:357005","MESH:C536309","Orphanet:63454","ICD10CM:H35.5","UMLS:C1868569","GARD:9821"],"termid":"MONDO:0018973","xrefs":{"Monarch":{"xref_id":"0018973"}}}


id: PBO:0120426
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Wnt inhibitory factor 1","termid":"PBO:0120426"}


id: PBO:0045896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 gamma pseudogene 8","termid":"PBO:0045896"}


id: MONDO:0009833
data:
  {"annotated_genes":["SJAG_03684","SJAG_04491","SJAG_02171","SJAG_00487","SJAG_04991"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88230,88227,88228,88229],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044204"},{"annotations":[87973],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044205"}]},"cv_name":"mondo","definition":"Shwachman-Diamond syndrome (SDS) is a rare multisystemic syndrome characterized by chronic and usually mild neutropenia, pancreatic exocrine insufficiency associated with steatorrhea and growth failure, skeletal dysplasia with short stature, and an increased risk of bone marrow aplasia or leukemic transformation.","definition_xrefs":["Orphanet:811"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete metaphyseal dysplasia (obsolete MONDO:0000841)","termid":"MONDO:0000841"},{"relation_name":"excluded_subClassOf","term_name":"inherited aplastic anemia","termid":"MONDO:0001713"},{"relation_name":"excluded_subClassOf","term_name":"pancreas disorder","termid":"MONDO:0002356"},{"relation_name":"excluded_subClassOf","term_name":"obsolete polymalformative genetic syndrome with increased risk of developing cancer (obsolete MONDO:0015945)","termid":"MONDO:0015945"},{"relation_name":"excluded_subClassOf","term_name":"functional neutrophil defect","termid":"MONDO:0015978"},{"relation_name":"excluded_subClassOf","term_name":"obsolete multiple metaphyseal dysplasia (obsolete MONDO:0019693)","termid":"MONDO:0019693"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00487":null,"SJAG_02171":null,"SJAG_03684":null,"SJAG_04491":null,"SJAG_04991":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"Shwachman-Diamond syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C61235","NORD:1711","OMIMPS:260400","icd11.foundation:232885463","DOID:0060479","SCTID:89454001","UMLS:C0272170","DOID:0080023","GARD:4863","MedDRA:10067940","NANDO:1200356","MEDGEN:124418","MESH:C537330","NANDO:2200756"],"synonyms":[{"name":"SDS","type":"exact"},{"name":"Schwachman-Diamond syndrome","type":"exact"},{"name":"Schwachmann-Diamond syndrome","type":"exact"},{"name":"Shwachman Diamond Syndrome","type":"exact"},{"name":"Shwachman syndrome","type":"exact"},{"name":"Shwachman-Bodian syndrome","type":"related"},{"name":"Shwachman-Bodian-Diamond syndrome","type":"exact"},{"name":"Shwachman-Diamond syndrome","type":"exact"},{"name":"Shwachman-Diamond type metaphyseal dysplasia","type":"related"},{"name":"congenital lipomatosis of pancreas","type":"related"},{"name":"lipomatosis of pancreas, congenital","type":"related"},{"name":"pancreatic insufficiency and bone marrow dysfunction","type":"exact"}],"termid":"MONDO:0009833","terms_by_termid":{"MONDO:0044204":null,"MONDO:0044205":null},"xrefs":{"Monarch":{"xref_id":"0009833"}}}


id: PBO:0038812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 19","termid":"PBO:0038812"}


id: MONDO:0850157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A B-lymphoblastic leukemia/lymphoma that is characterized by the presence of lymphoblasts that carry a translocation between the TEL gene on chromosome 12 and the AML1 gene on chromosome 21, (p13.2;q22.1). It results in the production of the TEL-AML1 (ETV6-RUNX1) fusion protein.","definition_xrefs":["DOID:0080645"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell acute lymphoblastic leukemia","termid":"MONDO:0004947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"B-lymphoblastic leukemia/lymphoma with ETV6-RUNX1","termid":"MONDO:0850157","xrefs":{"Monarch":{"xref_id":"0850157"}}}


id: MONDO:0001154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spotted fever that has material basis in Rickettsia sibirica, which is transmitted by ticks (Dermacentor nuttalli, Dermacentor marginatus and Haemaphysalis concinna). The infection has symptom fever, has symptom eschar, has symptom regional adenopathy, and has symptom maculopapular rash.","definition_xrefs":["DOID:10921"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siberian tick typhus","secondary_identifiers":["UMLS:C0549160","ICD10CM:A77.2","SCTID:186781003","MEDGEN:639822","ICD9:082.2"],"synonyms":[{"name":"Manchurian typhus","type":"exact"},{"name":"North Asian tick fever","type":"exact"},{"name":"North Asian tick fever (disorder) [ambiguous]","type":"exact"},{"name":"North Asian tick typhus","type":"exact"},{"name":"Rickettsia sibirica spotted fever","type":"exact"}],"termid":"MONDO:0001154","xrefs":{"Monarch":{"xref_id":"0001154"}}}


id: GO:2000996
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mannan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell wall polysaccharide catabolic process","termid":"GO:2000968"},{"relation_name":"is_a","term_name":"regulation of mannan catabolic process","termid":"GO:2000994"},{"relation_name":"positively_regulates","term_name":"mannan catabolic process","termid":"GO:0046355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of mannan catabolic process","synonyms":[{"name":"positive regulation of mannan breakdown","type":"exact"},{"name":"positive regulation of mannan catabolism","type":"exact"},{"name":"positive regulation of mannan degradation","type":"exact"}],"termid":"GO:2000996"}


id: PBO:0031354
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_nystatin","termid":"PBO:0031354"}


id: MONDO:0018656
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye degenerative disorder","termid":"MONDO:0004884"},{"relation_name":"is_a","term_name":"leukodystrophy, hypomyelinating, 7, with or without oligodontia and/or hypogonadotropic hypogonadism","termid":"MONDO:0011897"},{"relation_name":"is_a","term_name":"hereditary ataxia","termid":"MONDO:0100309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0005328"],"is_obsolete":false,"name":"tremor-ataxia-central hypomyelination syndrome","secondary_identifiers":["GARD:17774","UMLS:C5680067","MEDGEN:1842823","Orphanet:447896"],"synonyms":[{"name":"TACH syndrome","type":"exact"}],"termid":"MONDO:0018656","xrefs":{"Monarch":{"xref_id":"0018656"}}}


id: PBO:0004494
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTR family peptide transporter (predicted)","termid":"PBO:0004494"}


id: PBO:0070974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L18 pseudogene 12","termid":"PBO:0070974"}


id: PBO:0080191
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vascular endothelial growth factor D","termid":"PBO:0080191"}


id: PBO:0056556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minichromosome maintenance complex component 4","termid":"PBO:0056556"}


id: PBO:0026738
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_positive_regulation_of_DNA-directed_DNA_polymerase_activity","termid":"PBO:0026738"}


id: PBO:0041296
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C2 domain containing 3 centriole elongation regulator","termid":"PBO:0041296"}


id: GO:1904285
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein-pyridoxal-5-phosphate linkage.","definition_xrefs":["PMID:25957689","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein modification process","termid":"GO:0031399"},{"relation_name":"regulates","term_name":"protein-pyridoxal-5-phosphate linkage","termid":"GO:0018352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein-pyridoxal-5-phosphate linkage","termid":"GO:1904285"}


id: PBO:0070500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L5 pseudogene 35","termid":"PBO:0070500"}


id: PBO:0076486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TARDBP pseudogene 1","termid":"PBO:0076486"}


id: GO:1900444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of filamentous growth of a population of unicellular organisms in response to biotic stimulus.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of response to biotic stimulus","termid":"GO:0002832"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:1900443"},{"relation_name":"negatively_regulates","term_name":"filamentous growth of a population of unicellular organisms in response to biotic stimulus","termid":"GO:0036180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","synonyms":[{"name":"down regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"down-regulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"downregulation of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"exact"},{"name":"inhibition of filamentous growth of a population of unicellular organisms in response to biotic stimulus","type":"narrow"}],"termid":"GO:1900444"}


id: PBO:0002836
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expression induced by salt stress","termid":"PBO:0002836"}


id: MOD:01160
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively results in the loss of an ammonia, usually by a process of vicinal dehydration, rearrangement, and rehydration with release of ammonia, resulting in a loss of nitrogen with no gain of oxygen.","definition_xrefs":["Unimod:385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deaminated residue","synonyms":[{"name":"Ammonia-loss","type":"related"},{"name":"Loss of ammonia","type":"related"}],"termid":"MOD:01160"}


id: PBO:0034543
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_nucleus_during_cellular_response_to_hydroxyurea","termid":"PBO:0034543"}


id: PBO:0049188
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRHL3 antisense RNA 1","termid":"PBO:0049188"}


id: MONDO:0026184
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic visceral malformation of the liver, biliary tract, pancreas or spleen (obsolete MONDO:0026184)","secondary_identifiers":["Orphanet:183548"],"termid":"MONDO:0026184","xrefs":{"Monarch":{"xref_id":"0026184"}}}


id: FYPO:0000728
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin cortical patch assembly is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cortical patch organization","termid":"FYPO:0000790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0004803","FYPO:0001320","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal actin cortical patch assembly","synonyms":[{"name":"abnormal F-actin patch assembly","type":"exact"},{"name":"abnormal actin cortical patch assembly during mitotic cell cycle","type":"related"},{"name":"abnormal actin cortical patch assembly during vegetative growth","type":"exact"},{"name":"abnormal actin patch assembly","type":"exact"}],"termid":"FYPO:0000728"}


id: GO:0033629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of cell adhesion mediated by integrin.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell adhesion","termid":"GO:0007162"},{"relation_name":"is_a","term_name":"regulation of cell adhesion mediated by integrin","termid":"GO:0033628"},{"relation_name":"negatively_regulates","term_name":"cell adhesion mediated by integrin","termid":"GO:0033627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"negatively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of cell adhesion mediated by integrin","synonyms":[{"name":"negative regulation of cell adhesion mediated by integrin complex","type":"exact"}],"termid":"GO:0033629"}


id: MONDO:0005903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Inflammation of the sac surrounding the heart (pericardium) due to mycobacterium tuberculosis infection. Pericarditis can lead to swelling (pericardial effusion), compression of the heart (cardiac tamponade), and preventing normal beating of the heart.","definition_xrefs":["MESH:D010495"],"direct_ancestors":[{"relation_name":"is_a","term_name":"extrapulmonary tuberculosis","termid":"MONDO:0000368"},{"relation_name":"is_a","term_name":"pericarditis","termid":"MONDO:0005904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"pericardial tuberculosis","secondary_identifiers":["SCTID:67256000","UMLS:C0031049","ICD9:017.90","EFO:0007426","MEDGEN:18379","DOID:4962"],"synonyms":[{"name":"tuberculous pericarditis","type":"exact"}],"termid":"MONDO:0005903","xrefs":{"Monarch":{"xref_id":"0005903"}}}


id: GO:0160215
data:
  {"annotated_genes":["SJAG_00581","SJAG_01248","SJAG_03844","SJAG_04039","SJAG_03627","SJAG_02769","SJAG_02985","SJAG_04895","SJAG_01075","SJAG_01396","SJAG_00944","SJAG_04007","SJAG_00902","SJAG_03013","SJAG_01416","SJAG_04186"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003860"},{"annotations":[77396,78735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003986"},{"annotations":[93786],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004099"},{"annotations":[75536],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051500"},{"annotations":[98827,109512,103662,82323],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0047617"},{"annotations":[111518,65021],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031078"},{"annotations":[79292,92062],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032041"},{"annotations":[106213],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0141222"},{"annotations":[92063],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140765"},{"annotations":[111519],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032129"},{"annotations":[79293,116484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046969"},{"annotations":[111520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140937"},{"annotations":[99225,111521],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034739"},{"annotations":[79294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046970"},{"annotations":[111522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180032"},{"annotations":[111523],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180033"},{"annotations":[72604],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000225"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: R-CO-X + H2O = R-COOH + HX, hydrolysis of an acyl group or groups from a substrate molecule.","definition_xrefs":["PMID:29637793","PMID:38355760","PMID:2760018"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00581":null,"SJAG_00902":null,"SJAG_00944":null,"SJAG_01075":null,"SJAG_01248":null,"SJAG_01396":null,"SJAG_01416":null,"SJAG_02769":null,"SJAG_02985":null,"SJAG_03013":null,"SJAG_03627":null,"SJAG_03844":null,"SJAG_04007":null,"SJAG_04039":null,"SJAG_04186":null,"SJAG_04895":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824"],"is_obsolete":false,"name":"deacylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0160215","terms_by_termid":{"GO:0000225":null,"GO:0003860":null,"GO:0003986":null,"GO:0004099":null,"GO:0031078":null,"GO:0032041":null,"GO:0032129":null,"GO:0034739":null,"GO:0046969":null,"GO:0046970":null,"GO:0047617":null,"GO:0051500":null,"GO:0140765":null,"GO:0140937":null,"GO:0141222":null,"GO:0180032":null,"GO:0180033":null}}


id: GO:0097743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A de novo centriole assembly process observed in multi-ciliated sperm cells of some primitive land plants, and where centrioles are formed from a blepharoplast, ultimately giving rise to multiple cilia on the sperm surface.","definition_xrefs":["PMID:25047614","GOC:cilia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"de novo centriole assembly","termid":"GO:0097742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0000226","GO:0044085"],"is_obsolete":false,"name":"de novo centriole assembly via blepharoplast","synonyms":[{"name":"multiciliation","type":"related"},{"name":"multiciliogenesis","type":"related"}],"termid":"GO:0097743"}


id: PBO:0068924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 167, pseudogene","termid":"PBO:0068924"}


id: PBO:0017410
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-instance_of","termid":"PBO:0017410"}


id: GO:1901933
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of bicyclogermacrene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene catabolic process","termid":"GO:0051763"},{"relation_name":"is_a","term_name":"bicyclogermacrene metabolic process","termid":"GO:1901932"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"bicyclogermacrene catabolic process","synonyms":[{"name":"bicyclogermacrene breakdown","type":"exact"},{"name":"bicyclogermacrene catabolism","type":"exact"},{"name":"bicyclogermacrene degradation","type":"exact"}],"termid":"GO:1901933"}


id: GO:0038162
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by erythropoietin (EPO) binding to the erythropoietin receptor (EPO-R) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:12489509","GOC:nhn"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine-mediated signaling pathway","termid":"GO:0019221"},{"relation_name":"part_of","term_name":"cellular response to erythropoietin","termid":"GO:0036018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"erythropoietin-mediated signaling pathway","secondary_identifiers":["Reactome:R-HSA-9006335"],"synonyms":[{"name":"EPO-R signaling pathway","type":"exact"},{"name":"erythropoietin receptor signaling pathway","type":"exact"}],"termid":"GO:0038162"}


id: PBO:0063808
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphorylase kinase catalytic subunit gamma 1","termid":"PBO:0063808"}


id: PBO:0062864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"OTU deubiquitinase 1","termid":"PBO:0062864"}


id: PBO:0120269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQSEC3 antisense RNA 3","termid":"PBO:0120269"}


id: PBO:0091686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UBAP2/UBAP2L","termid":"PBO:0091686"}


id: PBO:0069662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 939, pseudogene","termid":"PBO:0069662"}


id: PR:O42991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl1601 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L16-B (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC839.13c","synonyms":[{"name":"Spom972h-rpl1601","type":"exact"}],"termid":"PR:O42991"}


id: GO:0006540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of succinate from L-glutamate. Also known as GABA (gamma-aminobutyrate) shunt since it channels glutamate into the TCA cycle bypassing two steps of that cycle. There are three enzymes involved in the GABA shunt: glutamate decarboxylase (GAD), GABA aminotransferase (GABA-TA), and succinate semialdehyde dehydrogenase (SSADH). These three enzymes acting in concert to convert glutamate into succinate. The GABA shunt is predominantly associated with neurotransmission in the mammalian brain. It is also present in nonneuronal cells, in plants, in unicellular eukaryotes, and in prokaryotes.","definition_xrefs":["PMID:12740438"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate metabolic process","termid":"GO:0006105"},{"relation_name":"is_a","term_name":"L-glutamate catabolic process","termid":"GO:0006538"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0006520","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"gamma-aminobutyrate shunt","secondary_identifiers":["MetaCyc:GLUDEG-I-PWY"],"synonyms":[{"name":"4-aminobutyrate shunt","type":"exact"},{"name":"GABA shunt","type":"exact"},{"name":"degradation of glutamate to succinate through GABA","type":"exact"},{"name":"gamma aminobutyrate shunt","type":"exact"},{"name":"glutamate decarboxylation to succinate","type":"exact"},{"name":"glutamate degradation via 4-aminobutyrate","type":"exact"},{"name":"glutamate degradation via GABA","type":"exact"}],"termid":"GO:0006540"}


id: PBO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIID complex subunit Taf11 (predicted)","termid":"PBO:0001187"}


id: GO:0044587
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a cellopentaose, an oligosaccharide consisting of four glucose residues resulting from hydrolysis of cellulose.","definition_xrefs":["GOC:mengo_curators","GOC:tt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligosaccharide binding","termid":"GO:0070492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"cellopentaose binding","termid":"GO:0044587"}


id: PBO:0066171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBIS pseudogene 4","termid":"PBO:0066171"}


id: MONDO:0017513
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"split foot","termid":"MONDO:0017450"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"split foot, unilateral","secondary_identifiers":["icd11.foundation:1995563146","Orphanet:295124"],"termid":"MONDO:0017513","xrefs":{"Monarch":{"xref_id":"0017513"}}}


id: PBO:0041111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSND pseudogene 4","termid":"PBO:0041111"}


id: PBO:0001740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"importin family nuclear export receptor Crm1","termid":"PBO:0001740"}


id: PBO:0075452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 4","termid":"PBO:0075452"}


id: PBO:0029419
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_palmitoylation_during_vegetative_growth","termid":"PBO:0029419"}


id: GO:0007390
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The spreading of the amnioserosa from its compressed state to cover the whole of the dorsal surface. Initiating in the thorax and spreading posteriorly, it is accompanied by the transition from a parasegmental to segmental division of the embryo.","definition_xrefs":["PMID:12147138","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic morphogenesis","termid":"GO:0048598"},{"relation_name":"part_of","term_name":"embryonic development via the syncytial blastoderm","termid":"GO:0001700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"germ-band shortening","synonyms":[{"name":"germ-band retraction","type":"exact"}],"termid":"GO:0007390"}


id: PBO:0082763
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the small-subunit processome; required for nuclear export of tRNAs; forms a complex with Rrp7p; may facilitate binding of Utp8p to aminoacylated tRNAs and their delivery to Los1p for export; conserved from yeast to mammals","termid":"PBO:0082763"}


id: PBO:0047383
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 17","termid":"PBO:0047383"}


id: GO:0019125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-phenylalanine.","definition_xrefs":["RESID:AA0194"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-phenylalanine racemization (obsolete GO:0019125)","termid":"GO:0019125"}


id: PBO:0063541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylethanolamine binding protein 1","termid":"PBO:0063541"}


id: PBO:0113533
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vacuolar membrane protein; required for efflux of amino acids during autophagic body breakdown in vacuole; targeted to vacuole via AP-3 pathway; null mutation causes gradual loss of viability during starvation","termid":"PBO:0113533"}


id: PBO:0051487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF3 pseudogene 2","termid":"PBO:0051487"}


id: PBO:0119985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NTM antisense RNA 4","termid":"PBO:0119985"}


id: GO:0016834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A grouping term for carbon-carbon lyases that cannot be more accurately categorized.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete other carbon-carbon lyase activity (obsolete GO:0016834)","synonyms":[{"name":"other carbon-carbon lyase activity","type":"exact"}],"termid":"GO:0016834"}


id: PBO:0042958
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 3","termid":"PBO:0042958"}


id: PBO:0079006
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon CGT) 6-1","termid":"PBO:0079006"}


id: PBO:0043890
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"corticotropin releasing hormone receptor 2","termid":"PBO:0043890"}


id: PBO:0000368
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally represses str1","termid":"PBO:0000368"}


id: PBO:0085044
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Non-essential INO80 chromatin remodeling complex subunit; preferentially binds DNA ends, protecting them from exonucleatic cleavage; deletion affects telomere maintenance via recombination; related to mammalian high mobility group proteins","termid":"PBO:0085044"}


id: MONDO:0007609
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any gingival fibromatosis in which the cause of the disease is a mutation in the SOS1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary gingival fibromatosis","termid":"MONDO:0016070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, 1","secondary_identifiers":["OMIM:135300","UMLS:C4551558","MEDGEN:1647111","GARD:6509"],"synonyms":[{"name":"GGF1","type":"related"},{"name":"GINGF","type":"related"},{"name":"GINGF1","type":"related"},{"name":"HGF1","type":"related"},{"name":"SOS1 gingival fibromatosis","type":"exact"},{"name":"SOS1 hereditary gingival fibromatosis","type":"exact"},{"name":"fibromatosis gingival, hereditary, 1","type":"related"},{"name":"fibromatosis, gingival, 1","type":"exact"},{"name":"fibromatosis, gingival, hereditary","type":"related"},{"name":"fibromatosis, gingival, type 1","type":"exact"},{"name":"gingival fibromatosis caused by mutation in SOS1","type":"exact"},{"name":"gingival fibromatosis, 1","type":"related"},{"name":"hereditary gingival fibromatosis caused by mutation in SOS1","type":"exact"},{"name":"hereditary gingival fibromatosis, 1","type":"related"}],"termid":"MONDO:0007609","xrefs":{"Monarch":{"xref_id":"0007609"}}}


id: MONDO:0007921
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare syndromic disorder characterized by the variable triad of characteristic yellow nails, chronic respiratory manifestations, and primary lymphedema.","definition_xrefs":["Orphanet:662"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"primary lymphedema","termid":"MONDO:0019175"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"yellow nail syndrome","secondary_identifiers":["EFO:1001452","MedDRA:10048244","ICD9:703.8","DOID:0050468","NORD:1874","icd11.foundation:47812081","ICD9:757.0","ICD10CM:L60.5","GARD:184","MEDGEN:113164","SCTID:400211001","NCIT:C85238","UMLS:C0221348","MESH:D056684","OMIM:153300"],"synonyms":[{"name":"YNS","type":"exact"},{"name":"Yns","type":"related"},{"name":"lymphedema and Yellow nails","type":"related"},{"name":"lymphedema with yellow nails","type":"exact"},{"name":"yellow nail syndrome","type":"exact"}],"termid":"MONDO:0007921","xrefs":{"Monarch":{"xref_id":"0007921"}}}


id: PBO:0077561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 268","termid":"PBO:0077561"}


id: GO:0009999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into an auditory hair cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of inner ear auditory receptor cell fate specification","termid":"GO:0042669"},{"relation_name":"is_a","term_name":"negative regulation of inner ear auditory receptor cell differentiation","termid":"GO:0045608"},{"relation_name":"negatively_regulates","term_name":"auditory receptor cell fate specification","termid":"GO:0042667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of auditory receptor cell fate specification","synonyms":[{"name":"down regulation of auditory receptor cell fate specification","type":"exact"},{"name":"down-regulation of auditory receptor cell fate specification","type":"exact"},{"name":"downregulation of auditory receptor cell fate specification","type":"exact"},{"name":"inhibition of auditory receptor cell fate specification","type":"narrow"},{"name":"negative regulation of auditory hair cell fate specification","type":"exact"},{"name":"suppression of auditory receptor cell fate","type":"exact"},{"name":"suppression of hair cell fate","type":"exact"}],"termid":"GO:0009999"}


id: MONDO:0004863
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endophthalmitis","termid":"MONDO:0016047"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"purulent endophthalmitis","secondary_identifiers":["MEDGEN:537163","UMLS:C0259800","icd11.foundation:830703931","ICD10CM:H44.0","SCTID:41720003","ICD9:360.0","DOID:9724","ICD9:360.00"],"termid":"MONDO:0004863","xrefs":{"Monarch":{"xref_id":"0004863"}}}


id: PBO:0068915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 158, pseudogene","termid":"PBO:0068915"}


id: PBO:0067587
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 748, pseudogene","termid":"PBO:0067587"}


id: PBO:0087864
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcriptional activator of oleate genes; regulates genes involved in fatty acid utilization; zinc cluster protein; deletion confers sensitivity to Calcufluor white, and prevents growth on glycerol or lactate as sole carbon source","termid":"PBO:0087864"}


id: GO:0000011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The distribution of vacuoles into daughter cells after mitosis or meiosis, mediated by interactions between vacuoles and the cytoskeleton.","definition_xrefs":["GOC:mcc","PMID:14616069","PMID:10873824"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vacuole organization","termid":"GO:0007033"},{"relation_name":"is_a","term_name":"organelle inheritance","termid":"GO:0048308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"vacuole inheritance","termid":"GO:0000011"}


id: PBO:0027550
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_telomere","termid":"PBO:0027550"}


id: PBO:0085326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatidylinositol phosphate phosphatase; role in early and medial Golgi PtdIns4P hydrolysis; regulated by Vps74p interaction; ER localized transmembrane protein which cycles through the Golgi; role in protein trafficking, processing, secretion, and cell wall maintenance; regulates sphingolipid biosynthesis by modulating PtdIns(4)P metabolism; PtdIns4P PPase activity is crucial for autophagosome-vacuole fusion during autophagy; human homolog SACM1L complements autophagy defects of the null","termid":"PBO:0085326"}


id: MONDO:0030486
data:
  {"annotated_genes":["SJAG_04966","SJAG_01772"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88028,88029],"is_not":false,"summary":null,"term":"MONDO:0030486"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"},{"relation_name":"is_a","term_name":"VPS11-related neurological disorder","termid":"MONDO:0100617"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01772":null,"SJAG_04966":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"}],"interesting_parent_ids":["MONDO:0003441"],"is_obsolete":false,"name":"dystonia 32","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060939","MEDGEN:1794239","OMIM:619637","UMLS:C5562029"],"synonyms":[{"name":"DYT32","type":"exact"}],"termid":"MONDO:0030486","terms_by_termid":{"MONDO:0030486":null},"xrefs":{"Monarch":{"xref_id":"0030486"}}}


id: PBO:0070207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U7 small nuclear 134 pseudogene","termid":"PBO:0070207"}


id: GO:0016477
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The controlled self-propelled movement of a cell from one site to a destination guided by molecular cues.","definition_xrefs":["GOC:dph","GOC:pf","GOC:cjm","GOC:ems","Wikipedia:Cell_migration"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell motility","termid":"GO:0048870"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell migration","termid":"GO:0016477"}


id: MONDO:0016759
data:
  {"annotated_genes":["SJAG_04907","SJAG_03328","SJAG_01260","SJAG_00754"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88588],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010190"},{"annotations":[89078],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012890"},{"annotations":[89082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012891"},{"annotations":[88073],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014874"}]},"cv_name":"mondo","definition":"Pontocerebellar hypoplasia type 2 (PCH2) is the most common subtype of pontocerebellar hypoplasia characterized by neonatal onset and a lack of voluntary motor development and later progressive microencephaly, generalized clonus, development of chorea and spasticity. The majority of patients will not reach puberty.","definition_xrefs":["Orphanet:2524"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bulbospinal muscular atrophy","termid":"MONDO:0016113"},{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00754":null,"SJAG_01260":null,"SJAG_03328":null,"SJAG_04907":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"},{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C124057","MESH:C548070","MEDGEN:420956","GARD:10705","DOID:0112328","SCTID:715463008","UMLS:C2932714","icd11.foundation:1158649247"],"synonyms":[{"name":"PCH2","type":"exact"},{"name":"progressive microcephaly from birth extrapyramidal dyskinesia chorea epilepsy","type":"related"}],"termid":"MONDO:0016759","terms_by_termid":{"MONDO:0010190":null,"MONDO:0012890":null,"MONDO:0012891":null,"MONDO:0014874":null},"xrefs":{"Monarch":{"xref_id":"0016759"}}}


id: PBO:0043491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centlein","termid":"PBO:0043491"}


id: PBO:0082670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Dsl1p tethering complex; this complex interacts with ER SNAREs Sec20p and Use1p; mediates Sey1p-independent homotypic ER fusion; proposed to be involved in protein secretion; localizes to the ER and nuclear envelope","termid":"PBO:0082670"}


id: GO:0005176
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein-tyrosine kinase receptor Neu/ErbB-2/HER2.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"ErbB-2 class receptor binding","synonyms":[{"name":"ErbB-2 class receptor ligand","type":"narrow"},{"name":"HER2 receptor binding","type":"exact"},{"name":"HER2 receptor ligand","type":"narrow"},{"name":"Neu receptor binding","type":"exact"},{"name":"Neu receptor ligand","type":"narrow"}],"termid":"GO:0005176"}


id: GO:0030833
data:
  {"annotated_genes":["SJAG_04100","SJAG_04479","SJAG_03086","SJAG_01894","SJAG_01993","SJAG_00521","SJAG_02566","SJAG_00279","SJAG_02700"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[68861,69757,78683,79323,81379],"is_not":false,"summary":null,"term":"GO:0030833"},{"annotations":[82131,94334,77494,81082],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the assembly of actin filaments by the addition of actin monomers to a filament.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin polymerization or depolymerization","termid":"GO:0008064"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"regulates","term_name":"actin filament polymerization","termid":"GO:0030041"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_00521":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02566":null,"SJAG_02700":null,"SJAG_03086":null,"SJAG_04100":null,"SJAG_04479":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0030036"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0030036","GO:0044085","GO:0007010"],"is_obsolete":false,"name":"regulation of actin filament polymerization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of actin polymerization","type":"exact"}],"termid":"GO:0030833","terms_by_termid":{"GO:0030833":null,"GO:0051016":null}}


id: PBO:0069278
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 534, pseudogene","termid":"PBO:0069278"}


id: GO:0061245
data:
  {"annotated_genes":["SJAG_00268","SJAG_00596","SJAG_01799","SJAG_03581","SJAG_01196","SJAG_00514","SJAG_02392","SJAG_03705","SJAG_00333","SJAG_00236","SJAG_01738","SJAG_00661","SJAG_01388","SJAG_04522","SJAG_04703","SJAG_03637","SJAG_03048","SJAG_04461","SJAG_00030","SJAG_02022","SJAG_04322","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91877,97860,101662,101756,106675,109644,112914,114362,116104,119969,120722],"is_not":false,"summary":null,"term":"GO:0061245"},{"annotations":[107383,102200,95752],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:2000247"},{"annotations":[105715],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0061361"},{"annotations":[104405],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000099"},{"annotations":[120870,93151,97672,106555,115103,96595],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any cellular process that results in the specification, formation or maintenance of a bipolar intracellular organization or cell growth patterns.","definition_xrefs":["GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment or maintenance of cell polarity","termid":"GO:0007163"}],"gene_count":22,"genes_by_uniquename":{"SJAG_00030":null,"SJAG_00236":null,"SJAG_00268":null,"SJAG_00333":null,"SJAG_00514":null,"SJAG_00596":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01196":null,"SJAG_01388":null,"SJAG_01738":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_03705":null,"SJAG_04322":null,"SJAG_04461":null,"SJAG_04522":null,"SJAG_04703":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment or maintenance of bipolar cell polarity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061245","terms_by_termid":{"GO:0061245":null,"GO:0061361":null,"GO:2000099":null,"GO:2000100":null,"GO:2000247":null}}


id: GO:0031697
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a beta-1 adrenergic receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adrenergic receptor binding","termid":"GO:0031690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"beta-1 adrenergic receptor binding","synonyms":[{"name":"beta-1 adrenergic receptor ligand","type":"narrow"}],"termid":"GO:0031697"}


id: PBO:0084947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Multifunctional lipase/hydrolase/phospholipase; triacylglycerol lipase, steryl ester hydrolase, and Ca2+-independent phospholipase A2; catalyzes acyl-CoA dependent acylation of LPA to PA; required with Tgl3p for timely bud formation; phosphorylated and activated by Cdc28p; TGL4 has a paralog, TGL5, that arose from the whole genome duplication","termid":"PBO:0084947"}


id: GO:0044340
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals initiated by binding of a Wnt protein to a frizzled family receptor on the surface of the target cell, followed by propagation of the signal via beta-catenin, and ending with a change in transcription of target genes that contributes to modulating the rate or frequency of cell proliferation.","definition_xrefs":["GOC:BHF","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete canonical Wnt signaling pathway involved in regulation of cell proliferation (obsolete GO:0044340)","synonyms":[{"name":"canonical Wnt receptor signaling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt receptor signalling pathway involved in regulation of cell proliferation","type":"exact"},{"name":"canonical Wnt-activated signaling pathway involved in regulation of cell proliferation","type":"exact"}],"termid":"GO:0044340"}


id: GO:0052351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates systemic acquired resistance in the symbiont organism; systemic acquired resistance is a salicylic acid-mediated response that confers broad spectrum systemic resistance. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by organism of systemic acquired resistance in symbiont (obsolete GO:0052351)","synonyms":[{"name":"activation by organism of SAR in symbiont","type":"exact"},{"name":"activation by organism of systemic acquired resistance in symbiont","type":"exact"},{"name":"induction by organism of SAR in symbiont","type":"exact"},{"name":"induction by organism of systemic acquired resistance in symbiont","type":"exact"}],"termid":"GO:0052351"}


id: PBO:0091665
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repxeat protein","termid":"PBO:0091665"}


id: FYPO:0005008
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of serine residues three positions C-terminal to arginine residues (i.e. in Arg-X-X-Ser, or RxxS, sequences) does not occur.","definition_xrefs":["PMID:22976295","PomBase:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete abolished protein serine phosphorylation at RxxS site during vegetative growth (obsolete FYPO:0005008)","synonyms":[{"name":"abolished protein serine phosphorylation at Arg-X-X-Ser site during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at PAS site during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at RxxS site during mitotic cell cycle","type":"related"},{"name":"abolished protein serine phosphorylation at arginine-X-X-serine site during vegetative growth","type":"exact"},{"name":"abolished protein serine phosphorylation at phospho-Akt site during vegetative growth","type":"exact"},{"name":"protein serine phosphorylation abolished at RxxS site during vegetative growth","type":"exact"}],"termid":"FYPO:0005008"}


id: PBO:0034023
data:
  {"annotation_feature_type":"gene","cv_name":"pubprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"canto_approved_date","termid":"PBO:0034023"}


id: FYPO:0003888
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the fungal-type cell wall is thicker than normal at the new end of the cell.","definition_xrefs":["PMID:10547441","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cell wall thickness during vegetative growth","termid":"FYPO:0001035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002946"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002946"],"is_obsolete":false,"name":"increased cell wall thickness at new end during vegetative growth","synonyms":[{"name":"increased cell wall thickness at new end during mitotic cell cycle","type":"related"},{"name":"thickened cell wall at new end during vegetative growth","type":"exact"}],"termid":"FYPO:0003888"}


id: MOD:02051
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that contains an L-lysine residue crosslinked to one or more amino acid residues.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crosslinked L-lysine residue","synonyms":[{"name":"XlnkLys","type":"exact"}],"termid":"MOD:02051"}


id: PBO:0109381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 12","termid":"PBO:0109381"}


id: PR:Q9Y7T1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tap42 gene.","definition_xrefs":["UniProtKB:Q9Y7T1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C63.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC63.05","synonyms":[{"name":"Spom972h-tap42","type":"exact"}],"termid":"PR:Q9Y7T1"}


id: PBO:0056782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mex-3 RNA binding family member D","termid":"PBO:0056782"}


id: MONDO:0859202
data:
  {"annotated_genes":["SJAG_02571"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88239],"is_not":false,"summary":null,"term":"MONDO:0859202"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02571":null},"genotype_count":0,"is_obsolete":false,"name":"developmental delay, hypotonia, musculoskeletal defects, and behavioral abnormalities","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5562012","MEDGEN:1794222","OMIM:619595"],"termid":"MONDO:0859202","terms_by_termid":{"MONDO:0859202":null},"xrefs":{"Monarch":{"xref_id":"0859202"}}}


id: MONDO:1010097
data:
  {"annotated_genes":["SJAG_02163"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044326"},{"annotations":[88745],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013468"}]},"cv_name":"mondo","definition":"Any neurological disorder in which the cause of the disease is a mutation in the DHDDS gene.","definition_xrefs":["PMID:34034154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02163":null},"genotype_count":0,"is_obsolete":false,"name":"DHDDS-related syndrome","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"progressive myoclonus ataxia","type":"broad"}],"termid":"MONDO:1010097","terms_by_termid":{"MONDO:0013468":null,"MONDO:0044326":null},"xrefs":{"Monarch":{"xref_id":"1010097"}}}


id: GO:0008297
data:
  {"annotated_genes":["SJAG_05280","SJAG_01648","SJAG_02908","SJAG_00377"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75961,103165],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008310"},{"annotations":[99138,74600],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045145"}]},"cv_name":"molecular_function","definition":"Catalysis of the sequential cleavage of mononucleotides from a free 5' or 3' terminus of a single-stranded DNA molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00377":null,"SJAG_01648":null,"SJAG_02908":null,"SJAG_05280":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0140097","GO:0003674","GO:0004527","GO:0016787","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"single-stranded DNA exodeoxyribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"single-stranded DNA specific exodeoxyribonuclease activity","type":"related"},{"name":"ssDNA-specific exodeoxyribonuclease activity","type":"related"}],"termid":"GO:0008297","terms_by_termid":{"GO:0008310":null,"GO:0045145":null}}


id: MONDO:1012698
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any necrotising myelopathy that occurs in calves of the Simmental breed of cattle and is characterized by progressive hindlimb ataxia and paralysis and bilateral symmetrical foci of necrosis throughout the grey matter of the brain.","definition_xrefs":["PMID:18503072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"necrotising myelopathy, non-human animal","termid":"MONDO:1011850"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifocal symmetrical necrotizing encephalomyelopathy, Simmental cattle","secondary_identifiers":["OMIA:001490-9913"],"termid":"MONDO:1012698","xrefs":{"Monarch":{"xref_id":"1012698"}}}


id: MOD:01074
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a napthylacetyl group for a hydrogen atom.","definition_xrefs":["DeltaMass:0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"napthylacetyl modified residue","termid":"MOD:01074"}


id: MONDO:0013596
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nonsyndromic congenital nail disorder 10 (obsolete MONDO:0013596)","secondary_identifiers":["OMIM:614157"],"termid":"MONDO:0013596","xrefs":{"Monarch":{"xref_id":"0013596"}}}


id: MONDO:0012890
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  {"annotated_genes":["SJAG_03328"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89078],"is_not":false,"summary":null,"term":"MONDO:0012890"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the TSEN2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia type 2","termid":"MONDO:0016759"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 2B","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:612389","UMLS:C2676466","DOID:0060268","GARD:15553","MESH:C567325","MEDGEN:393505"],"synonyms":[{"name":"PCH2B","type":"related"},{"name":"TSEN2 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in TSEN2","type":"exact"},{"name":"pontocerebellar hypoplasia type 2B","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2B","type":"related"}],"termid":"MONDO:0012890","terms_by_termid":{"MONDO:0012890":null},"xrefs":{"Monarch":{"xref_id":"0012890"}}}


id: GO:0021686
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A developmental process, independent of morphogenetic (shape) change, that is required for the cerebellar granular layer to attain its fully functional state. The granular layer is the innermost layer of the cerebellar cortex. This layer contains densely packed small neurons, mostly granule cells. Some Golgi cells are found at the outer border. Granule neurons send parallel fibers to the upper molecular layer, where they synapse with Purkinje cell dendrites. Mossy fibers from the pontine nuclei in the white matter synapse with granule cell axons, Golgi cell axons and unipolar brush interneuron axons at cerebellar glomeruli in the granule cell layer.","definition_xrefs":["ISBN:0838580343","GOC:cls","GOC:dgh","GOC:dph","GO_REF:0000021","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure maturation","termid":"GO:0071695"},{"relation_name":"part_of","term_name":"cerebellar granular layer development","termid":"GO:0021681"},{"relation_name":"part_of","term_name":"cerebellar cortex maturation","termid":"GO:0021699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebellar granular layer maturation","termid":"GO:0021686"}


id: MONDO:0010301
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thrombocythemia, X-linked (obsolete MONDO:0010301)","termid":"MONDO:0010301","xrefs":{"Monarch":{"xref_id":"0010301"}}}


id: PR:Q9HGP7
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC212.08c gene.","definition_xrefs":["UniProtKB:Q9HGP7","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized GPI-anchored protein C212.08c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC212.08c","synonyms":[{"name":"Spom972h-SPAC212.08c","type":"exact"}],"termid":"PR:Q9HGP7"}


id: GO:0015112
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of nitrate ions (NO3-) from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transmembrane transporter activity","termid":"GO:0015103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"nitrate transmembrane transporter activity","synonyms":[{"name":"nitrite/nitrate porter activity","type":"related"}],"termid":"GO:0015112"}


id: PBO:0053900
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1189","termid":"PBO:0053900"}


id: PR:Q9Y807
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  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC146.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y807"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C146.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.02","synonyms":[{"name":"Spom972h-SPBC146.02","type":"exact"}],"termid":"PR:Q9Y807"}


id: PBO:0082976
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytoplasmic thioredoxin isoenzyme; part of the thioredoxin system that protects cells from oxidative and reductive stress; subunit of the LMA1 complex, with Pbi2p, that promotes vacuole inheritance; cofactor for Tsa1p; required for ER-Golgi transport; facilitates mitochondrial import of small Tims (Tim9p, Tim10p, Tim13p) by maintaining them in reduced form along with Trx2p; component of a signal transduction redox relay in a light sensing pathway; abundance increases under DNA replication stress","termid":"PBO:0082976"}


id: GO:0009876
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which pollen deposited on the stigma adheres to cells of the stigma.","definition_xrefs":["GOC:tair_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"pollen-pistil interaction","termid":"GO:0009875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"pollen adhesion","termid":"GO:0009876"}


id: MONDO:0023554
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Testicular failure, the cause of which is not present at birth.","definition_xrefs":["NCIT:C131091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"testicular disorder","termid":"MONDO:0002329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acquired testicular failure","secondary_identifiers":["SCTID:236811002","UMLS:C0403818","MEDGEN:588672"],"synonyms":[{"name":"acquired testicular failure","type":"exact"}],"termid":"MONDO:0023554","xrefs":{"Monarch":{"xref_id":"0023554"}}}


id: GO:0042013
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to interleukin-19.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine binding","termid":"GO:0019955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"interleukin-19 binding","synonyms":[{"name":"IL-19 binding","type":"exact"}],"termid":"GO:0042013"}


id: PBO:0073862
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A9 antisense RNA 1","termid":"PBO:0073862"}


id: PBO:0014293
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VAP family protein Scs2","termid":"PBO:0014293"}


id: PBO:0063208
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PCBP2 pseudogene 4","termid":"PBO:0063208"}


id: MONDO:0001437
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  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014206"}]},"cv_name":"mondo","definition":"A rare lung disorder characterized by the filling of the pulmonary alveoli with proteinaceous material which stains positive with periodic acid-Schiff stain. It may be idiopathic or secondary due to hematologic malignancies or the inhalation of mineral dusts. Signs and symptoms include dyspnea, cough and low grade fever.","definition_xrefs":["NCIT:C85037"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"is_obsolete":false,"name":"pulmonary alveolar proteinosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["icd11.foundation:1869739196","MEDGEN:1763046","DOID:12120","ICD9:516.0","MESH:D011649","NANDO:1200746","SCTID:10501004","UMLS:C5400698"],"synonyms":[{"name":"PAP","type":"broad"},{"name":"pulmonary alveolar proteinosis","type":"exact"}],"termid":"MONDO:0001437","terms_by_termid":{"MONDO:0014206":null},"xrefs":{"Monarch":{"xref_id":"0001437"}}}


id: PBO:0038438
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylacetamide deacetylase like 4","termid":"PBO:0038438"}


id: PBO:0029812
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  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_actin_cable_organization_during_mitosis","termid":"PBO:0029812"}


id: MONDO:0034953
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  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndromic inherited retinal disorder (obsolete MONDO:0034953)","secondary_identifiers":["Orphanet:519325"],"termid":"MONDO:0034953","xrefs":{"Monarch":{"xref_id":"0034953"}}}


id: FYPO:0006706
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which a calcium-transporting ATPase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished transporter activity","termid":"FYPO:0002117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002114"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002114","FYPO:0000652","FYPO:0005447","FYPO:0000707","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished calcium-transporting ATPase activity","synonyms":[{"name":"calcium-transporting ATPase activity abolished","type":"exact"}],"termid":"FYPO:0006706"}


id: GO:1901605
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chemical reactions and pathways involving an alpha-amino acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"carboxylic acid metabolic 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acid metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000043":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"synonyms":[{"name":"alpha-amino acid metabolism","type":"exact"}],"termid":"GO:1901605","terms_by_termid":{"GO:0000053":null,"GO:0000105":null,"GO:0000162":null,"GO:0006528":null,"GO:0006529":null,"GO:0006532":null,"GO:0006533":null,"GO:0006534":null,"GO:0006535":null,"GO:0006536":null,"GO:0006538":null,"GO:0006541":null,"GO:0006542":null,"GO:0006545":null,"GO:0006551":null,"GO:0006555":null,"GO:0006564":null,"GO:0006567":null,"GO:0006571":null,"GO:0006574":null,"GO:0006591":null,"GO:0006592":null,"GO:0009086":null,"GO:0009088":null,"GO:0009090":null,"GO:0009094":null,"GO:0009098":null,"GO:0009099":null,"GO:0010121":null,"GO:0010133":null,"GO:0019240":null,"GO:0019264":null,"GO:0019280":null,"GO:0019284":null,"GO:0019344":null,"GO:0019450":null,"GO:0019464":null,"GO:0019478":null,"GO:0019509":null,"GO:0019544":null,"GO:0019676":null,"GO:0019878":null,"GO:0033387":null,"GO:0036088":null,"GO:0042450":null,"GO:0042852":null,"GO:0042853":null,"GO:0050667":null,"GO:0055129":null,"GO:0070981":null,"GO:0071266":null,"GO:0071269":null,"GO:0097054":null,"GO:1901705":null}}


id: PBO:0060120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND6 pseudogene 21","termid":"PBO:0060120"}


id: MONDO:0003969
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disorders related or resulting from use of amphetamines.","definition_xrefs":["MESH:D019969"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance abuse","termid":"MONDO:0002491"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amphetamine abuse","secondary_identifiers":["SCTID:84758004","UMLS:C0236807","DOID:670","icd11.foundation:879494155","ICD9:305.7","ICD9:305.70","MEDGEN:66744"],"termid":"MONDO:0003969","xrefs":{"Monarch":{"xref_id":"0003969"}}}


id: PATO:0002152
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's being curved outwards from the side.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"splayed","termid":"PATO:0001785"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splayed lateral","termid":"PATO:0002152"}


id: PBO:0002515
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor Sfp1 (predicted)","termid":"PBO:0002515"}


id: PBO:0080774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XK related 5","termid":"PBO:0080774"}


id: PBO:0078599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 60 pseudogene 12, Y-linked","termid":"PBO:0078599"}


id: MONDO:0017261
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete systemic diseases with panuveitis (obsolete MONDO:0017261)","secondary_identifiers":["Orphanet:280933"],"termid":"MONDO:0017261","xrefs":{"Monarch":{"xref_id":"0017261"}}}


id: MONDO:1011614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Von Willebrand disease that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Von Willebrand disease, non-human animal","termid":"MONDO:1011411"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Von Willebrand disease, horse","secondary_identifiers":["OMIA:001056-9796"],"termid":"MONDO:1011614","xrefs":{"Monarch":{"xref_id":"1011614"}}}


id: GO:0044107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving alcohols, any of a class of compounds containing one or more hydroxyl groups attached to a saturated carbon atom, as carried out by individual cells.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular alcohol metabolic process (obsolete GO:0044107)","termid":"GO:0044107"}


id: MONDO:0003250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A granular cell tumor that is confined to the site of origin, without metastatic potential.","definition_xrefs":["NCIT:C3252"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign glioma","termid":"MONDO:0000638"},{"relation_name":"is_a","term_name":"granular cell tumor","termid":"MONDO:0006235"},{"relation_name":"is_a","term_name":"benign neoplasm of peripheral nervous system","termid":"MONDO:0056804"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign granular cell tumor","secondary_identifiers":["MEDGEN:44550","MESH:D009379","DOID:5039","UMLS:C0027043"],"synonyms":[{"name":"benign granular cell myoblastoma","type":"exact"},{"name":"benign granular cell neoplasm","type":"exact"},{"name":"benign granular cell tumor","type":"exact"},{"name":"granular cell tumor, benign","type":"exact"},{"name":"myoblastoma","type":"exact"}],"termid":"MONDO:0003250","xrefs":{"Monarch":{"xref_id":"0003250"}}}


id: MONDO:0024881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm that arises from a pre-existing lower grade lesion, or as a result of a primary lesion that has spread to secondary sites, or due to a complication of a cancer treatment.","definition_xrefs":["NCIT:C4968"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"},{"relation_name":"is_a","term_name":"secondary neoplasm","termid":"MONDO:0024882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"secondary malignant neoplasm","secondary_identifiers":["EFO:0009812","ICD9:198.89","UMLS:C3266877","SCTID:128462008","ICD9:199.1","MEDGEN:473807"],"synonyms":[{"name":"secondary cancer","type":"exact"},{"name":"secondary malignancy","type":"exact"},{"name":"secondary malignant neoplasm","type":"exact"}],"termid":"MONDO:0024881","xrefs":{"Monarch":{"xref_id":"0024881"}}}


id: PBO:0073275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"septin 10","termid":"PBO:0073275"}


id: MONDO:0013323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any cranioectodermal dysplasia in which the cause of the disease is a mutation in the WDR35 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cranioectodermal dysplasia","termid":"MONDO:0009032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005240"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005497","MONDO:0005093","MONDO:0005240"],"is_obsolete":false,"name":"cranioectodermal dysplasia 2","secondary_identifiers":["UMLS:C3150874","GARD:15680","DOID:0080804","MEDGEN:462224","OMIM:613610"],"synonyms":[{"name":"CED2","type":"related"},{"name":"CRANIOECTODERMAL dysplasia 2","type":"related"},{"name":"Cranioectodermal dysplasia type 2","type":"exact"},{"name":"WDR35 cranioectodermal dysplasia","type":"exact"},{"name":"WDR35-related cranioectodermal dysplasia","type":"exact"},{"name":"cranioectodermal dysplasia 2","type":"exact"},{"name":"cranioectodermal dysplasia caused by mutation in WDR35","type":"exact"}],"termid":"MONDO:0013323","xrefs":{"Monarch":{"xref_id":"0013323"}}}


id: MONDO:1010797
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Ehlers-Danlos syndrome in dogs in which the cause of the disease is a mutation in the COL5A2 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ehlers-Danlos syndrome, dog","termid":"MONDO:1011493"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ehlers-Danlos syndrome, classic type, COL5A2-related, dog","secondary_identifiers":["OMIA:002295-9615"],"synonyms":[{"name":"cEDS","type":"exact"}],"termid":"MONDO:1010797","xrefs":{"Monarch":{"xref_id":"1010797"}}}


id: GO:1990503
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized secretory organelle found in neurons and associated with the formation of dendrodendritic gap junctions.","definition_xrefs":["PMID:7869120"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lamellar body","termid":"GO:0042599"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"dendritic lamellar body","synonyms":[{"name":"DLB","type":"exact"}],"termid":"GO:1990503"}


id: PBO:0028564
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_intergenic_meiotic_recombination","termid":"PBO:0028564"}


id: PBO:0000819
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydroxyacetone kinase Dak1","termid":"PBO:0000819"}


id: PBO:0054870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2284","termid":"PBO:0054870"}


id: MONDO:0036045
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroxinemia","termid":"MONDO:0005333"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"euthyroid dysprealbuminemic hyperthyroxinemia","secondary_identifiers":["Orphanet:597939","UMLS:C5680265","GARD:22401","MEDGEN:1842463"],"synonyms":[{"name":"Euthyroid dystransthyretinemic hyperthyroxinemia","type":"exact"}],"termid":"MONDO:0036045","xrefs":{"Monarch":{"xref_id":"0036045"}}}


id: PBO:0078677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Lys (anticodon TTT) 10-1","termid":"PBO:0078677"}


id: MONDO:0021071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm involving the larynx.","definition_xrefs":["NCIT:C3156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"laryngeal disorder","termid":"MONDO:0004382"},{"relation_name":"is_a","term_name":"respiratory tract neoplasm","termid":"MONDO:0020641"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal neoplasm","secondary_identifiers":["UMLS:C0023055","EFO:0003817","MEDGEN:7271","MESH:D007822","SCTID:126692004"],"synonyms":[{"name":"laryngeal neoplasm","type":"exact"},{"name":"laryngeal tumor","type":"exact"},{"name":"laryngeal tumour","type":"exact"},{"name":"larynx neoplasm","type":"exact"},{"name":"larynx neoplasm (disease)","type":"exact"},{"name":"larynx tumor","type":"exact"},{"name":"larynx tumour","type":"exact"},{"name":"neoplasm of larynx","type":"exact"},{"name":"neoplasm of the larynx","type":"exact"},{"name":"tumor of larynx","type":"exact"},{"name":"tumor of the larynx","type":"exact"},{"name":"tumour of larynx","type":"exact"},{"name":"tumour of the larynx","type":"exact"}],"termid":"MONDO:0021071","xrefs":{"Monarch":{"xref_id":"0021071"}}}


id: PBO:0120922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC71A1 antisense RNA 1","termid":"PBO:0120922"}


id: GO:0044609
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that associates with mRNP particles and RNA polymerase II and is proposed to integrate transcript elongation with the regulation of alternative splicing. In humans it is composed of the proteins KIAA1967/DBC1 and ZNF326/ZIRD.","definition_xrefs":["PMID:22446626","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"DBIRD complex","termid":"GO:0044609"}


id: MONDO:1012405
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic myelogenous leukemia, non-human animal","termid":"MONDO:1011819"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic myelogenous leukemia, dog","secondary_identifiers":["OMIA:001513-9615"],"termid":"MONDO:1012405","xrefs":{"Monarch":{"xref_id":"1012405"}}}


id: PBO:0064322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid phosphatase related 4","termid":"PBO:0064322"}


id: FYECO:0000323
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were cold shocked followed by recovery at a temperature range higher than normal for standard pombe growth.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cold shock and recovery at high temperature","termid":"FYECO:0000323"}


id: PBO:0087573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of TFIIH complex; involved in transcription initiation, similar to 34 kDa subunit of human TFIIH; interacts with Ssl1p","termid":"PBO:0087573"}


id: MONDO:0024480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"dermatosis of eyelid","secondary_identifiers":["SCTID:402700001","MEDGEN:697502","UMLS:C1274150"],"synonyms":[{"name":"dermatosis of eyelid","type":"exact"}],"termid":"MONDO:0024480","xrefs":{"Monarch":{"xref_id":"0024480"}}}


id: PBO:0038549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD17A pseudogene 4","termid":"PBO:0038549"}


id: MONDO:0018907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign, partly cystic, epithelial tumor of the sellar region, presumably derived from Rathke pouch epithelium. It affects mainly children and young adults. There are two clinicopathological forms: adamantinomatous craniopharyngioma and papillary craniopharyngioma. The most significant factor associated with recurrence is the extent of surgical resection, with lesions greater than 5 cm in diameter carrying a markedly worse prognosis. (Adapted from WHO)","definition_xrefs":["NCIT:C2964"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"},{"relation_name":"is_a","term_name":"central nervous system organ benign neoplasm","termid":"MONDO:0000628"},{"relation_name":"is_a","term_name":"bone benign neoplasm","termid":"MONDO:0000631"},{"relation_name":"is_a","term_name":"squamous cell neoplasm","termid":"MONDO:0002532"},{"relation_name":"is_a","term_name":"sella turcica neoplasm","termid":"MONDO:0002720"},{"relation_name":"is_a","term_name":"disorder of facial skeleton","termid":"MONDO:0023369"},{"relation_name":"is_a","term_name":"benign epithelial neoplasm","termid":"MONDO:0036976"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"craniopharyngioma","secondary_identifiers":["NORD:1996","MedDRA:10011318","DOID:3840","ICDO:9350/1","MEDGEN:41339","NANDO:2200091","GARD:10486","Orphanet:54595","SCTID:189179009","MESH:D003397","EFO:1000209","ICD9:237.0","UMLS:C0010276"],"synonyms":[{"name":"Adamantinomatous tumor","type":"related"},{"name":"Adamantinomatous tumour","type":"related"},{"name":"Dysodontogenic epithelial tumor","type":"related"},{"name":"Dysodontogenic epithelial tumour","type":"related"},{"name":"Rathke pouch neoplasm","type":"exact"},{"name":"Rathke pouch tumor","type":"exact"},{"name":"Rathke pouch tumour","type":"exact"},{"name":"Rathke's pouch neoplasm","type":"exact"},{"name":"Rathke's pouch tumor","type":"exact"},{"name":"Rathke's pouch tumour","type":"exact"},{"name":"craniopharyngeal duct tumor","type":"related"},{"name":"craniopharyngeal duct tumour","type":"related"},{"name":"craniopharyngioma (WHO grade I)","type":"exact"},{"name":"craniopharyngioma (morphologic abnormality)","type":"exact"},{"name":"craniopharyngioma, benign","type":"exact"},{"name":"cystoma","type":"related"},{"name":"neoplasm of Rathke's pouch","type":"exact"},{"name":"tumor of Rathke's pouch","type":"exact"},{"name":"tumour of Rathke's pouch","type":"exact"}],"termid":"MONDO:0018907","xrefs":{"Monarch":{"xref_id":"0018907"}}}


id: MONDO:0011907
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acrocapitofemoral dysplasia is a recently delineated skeletal dysplasia, characterized clinically by short stature of variable degrees with short limbs, brachydactyly and narrow thorax.","definition_xrefs":["Orphanet:63446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"acromelic dysplasia","termid":"MONDO:0019695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"acrocapitofemoral dysplasia","secondary_identifiers":["UMLS:C1843096","OMIM:607778","icd11.foundation:687396416","GARD:10605","DOID:0050604","MEDGEN:334681","MESH:C564334","SCTID:720416007"],"synonyms":[{"name":"ACFD","type":"related"},{"name":"acrocapitofemoral dysplasia","type":"exact"}],"termid":"MONDO:0011907","xrefs":{"Monarch":{"xref_id":"0011907"}}}


id: PBO:0080432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VPS51 pseudogene 16","termid":"PBO:0080432"}


id: PBO:0034328
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-ends","termid":"PBO:0034328"}


id: PBO:0076156
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUGT1 divergent transcript","termid":"PBO:0076156"}


id: MONDO:0800092
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hereditary inflammatory or rheumatoid-like osteoarthropathy (obsolete MONDO:0800092)","secondary_identifiers":["Orphanet:498445"],"synonyms":[{"name":"genetic inflammatory or rheumatoid-like osteoarthropathy","type":"exact"}],"termid":"MONDO:0800092","xrefs":{"Monarch":{"xref_id":"0800092"}}}


id: GO:0007136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase which is the first stage of meiosis II and during which chromosomes condense and the two daughter centrioles and their asters migrate toward the poles of the cell.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prophase","termid":"GO:0051324"},{"relation_name":"is_a","term_name":"meiosis II cell cycle phase","termid":"GO:0098765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"meiotic prophase II","termid":"GO:0007136"}


id: PATO:0001764
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An age which is high relative to the normal or average.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"age","termid":"PATO:0000011"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased age","synonyms":[{"name":"high age","type":"exact"}],"termid":"PATO:0001764"}


id: MONDO:0035400
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of autoimmune hepatitis characterized by the features of classic autoimmune hepatitis (i. e. clinical presentation as acute or chronic cryptogenic hepatitis, interface hepatitis on histological examination, elevated serum aspartate aminotransferase and alanine aminotransferase levels, hypergammaglobulinemia/elevated immunoglobulin G, therapeutic response to corticosteroids) in the absence of serum autoantibodies. Clinical manifestations include fatigue, malaise, arthralgia, jaundice, at later stages also signs of advanced chronic liver disease, such as spider nevi, caput medusae, splenomegaly, ascites, and palmar erythema. Presence of concurrent autoimmune diseases is frequently observed.","definition_xrefs":["Orphanet:563589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune hepatitis","termid":"MONDO:0016264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"seronegative autoimmune hepatitis","secondary_identifiers":["MEDGEN:1804383","ICD10CM:K75.4","UMLS:C5680121","GARD:22253"],"synonyms":[{"name":"Seronegative AIH","type":"exact"},{"name":"autoantibody-negative autoimmune hepatitis","type":"exact"}],"termid":"MONDO:0035400","xrefs":{"Monarch":{"xref_id":"0035400"}}}


id: GO:0033324
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of choline (2-hydroxyethyltrimethylammonium), via the intermediate N-monomethylethanolamine.","definition_xrefs":["GOC:mah","MetaCyc:PWY-3542"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choline biosynthetic process","termid":"GO:0042425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline biosynthetic process via N-monomethylethanolamine","synonyms":[{"name":"choline anabolism via N-monomethylethanolamine","type":"exact"},{"name":"choline biosynthesis via N-monomethylethanolamine","type":"exact"},{"name":"choline formation via N-monomethylethanolamine","type":"exact"},{"name":"choline synthesis via N-monomethylethanolamine","type":"exact"}],"termid":"GO:0033324"}


id: GO:0009004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of N-terminal leader sequences from secreted and periplasmic proteins precursor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete signal peptidase I activity (obsolete GO:0009004)","synonyms":[{"name":"Escherichia coli leader peptidase","type":"narrow"},{"name":"HOSP","type":"related"},{"name":"PuIO prepilin peptidase","type":"narrow"},{"name":"SPC","type":"related"},{"name":"SPase I activity","type":"related"},{"name":"bacterial leader peptidase 1","type":"related"},{"name":"bacterial leader peptidase I activity","type":"narrow"},{"name":"eukaryotic signal peptidase","type":"narrow"},{"name":"eukaryotic signal proteinase","type":"narrow"},{"name":"leader peptidase I","type":"related"},{"name":"leader peptidase activity","type":"related"},{"name":"leader peptide hydrolase activity","type":"related"},{"name":"leader proteinase activity","type":"related"},{"name":"phage-procoat-leader peptidase activity","type":"narrow"},{"name":"pilin leader peptidase","type":"narrow"},{"name":"prokaryotic leader peptidase","type":"narrow"},{"name":"prokaryotic signal peptidase","type":"narrow"},{"name":"prokaryotic signal proteinase","type":"narrow"},{"name":"propeptidase activity","type":"related"},{"name":"signal peptidase I activity","type":"exact"},{"name":"signal peptide hydrolase activity","type":"related"},{"name":"signal proteinase activity","type":"related"},{"name":"signalase activity","type":"related"}],"termid":"GO:0009004"}


id: GO:0007624
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specific actions or reactions of an organism that recur with a regularity more frequent than every 24 hours.","definition_xrefs":["PMID:19708721","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rhythmic process","termid":"GO:0048511"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ultradian rhythm","termid":"GO:0007624"}


id: PBO:0082381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta 2 subunit of the 20S proteasome; endopeptidase with trypsin-like activity that cleaves after basic residues; synthesized as a proprotein before being proteolytically processed for assembly into 20S particle; human homolog is subunit Z","termid":"PBO:0082381"}


id: GO:0097250
data:
  {"annotated_genes":["SJAG_02975","SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96684,104577],"is_not":false,"summary":null,"term":"GO:0097250"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of respiratory enzyme complexes I, III and IV of the mitochondrial inner membrane to form a large supercomplex.","definition_xrefs":["PMID:30030361","PMID:32311046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrion organization","termid":"GO:0007005"},{"relation_name":"is_a","term_name":"mitochondrial respiratory chain complex assembly","termid":"GO:0033108"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02975":null,"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0007005"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007005"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0007005"],"is_obsolete":false,"name":"mitochondrial respirasome assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial respiratory chain supercomplex assembly","type":"exact"},{"name":"mitochondrial respiratory supercomplex assembly","type":"exact"}],"termid":"GO:0097250","terms_by_termid":{"GO:0097250":null}}


id: GO:0048348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a paraxial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"paraxial mesodermal cell fate commitment","termid":"GO:0048343"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"paraxial mesodermal cell fate specification","termid":"GO:0048348"}


id: GO:1902017
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cilium assembly.","definition_xrefs":["PMID:17719545","GOC:dph","GOC:cilia","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of plasma membrane bounded cell projection assembly","termid":"GO:0120032"},{"relation_name":"is_a","term_name":"regulation of organelle assembly","termid":"GO:1902115"},{"relation_name":"regulates","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"regulation of cilium assembly","synonyms":[{"name":"regulation of ciliogenesis","type":"exact"},{"name":"regulation of cilium biogenesis","type":"related"}],"termid":"GO:1902017"}


id: PBO:0052058
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysyl-tRNA synthetase 1 pseudogene 2","termid":"PBO:0052058"}


id: PBO:0088325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GATOR2-SEACAT complex/GATOR1-SEACIT GTPase complex ubiquitin-protein ligase E3 subunit Sea3","termid":"PBO:0088325"}


id: FYPO:0000012
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype in which the G2/M transition of the mitotic cell cycle begins later than normal. The duration of G2 phase is thus longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2/M phase transition","termid":"FYPO:0000399"},{"relation_name":"is_a","term_name":"delayed cell cycle phase transition","termid":"FYPO:0000409"},{"relation_name":"is_a","term_name":"abnormal mitotic G2 phase progression","termid":"FYPO:0000563"},{"relation_name":"is_a","term_name":"increased duration of mitotic cell cycle phase","termid":"FYPO:0001069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0000631"],"is_obsolete":false,"name":"mitotic G2/M phase transition delay","secondary_identifiers":["FYPO:0000205","FYPO:0000604","FYPO:0000401","FYPO:0000606","FYPO:0000971","FYPO:0000605"],"synonyms":[{"name":"G2/M transition delay during mitotic cell cycle","type":"exact"},{"name":"cell cycle progression through the G2/M phase transition: delayed","type":"related"},{"name":"cell cycle, mitotic G2 delay","type":"related"},{"name":"decreased rate of mitotic G2 phase progression","type":"related"},{"name":"delayed cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"delayed entry into mitosis","type":"exact"},{"name":"delayed mitotic G2 phase progression","type":"related"},{"name":"delayed mitotic entry","type":"exact"},{"name":"delayed onset of mitotic M phase","type":"related"},{"name":"increased duration of mitotic G2 phase","type":"related"},{"name":"increased duration of mitotic G2 phase during vegetative growth","type":"related"},{"name":"increased mitotic G2 duration","type":"related"},{"name":"mitotic DNA replication checkpoint activated","type":"related"},{"name":"mitotic G2 delay","type":"related"},{"name":"mitotic G2/M transition DNA damage checkpoint activated","type":"related"},{"name":"mitotic G2/M transition delay","type":"exact"},{"name":"mitotic G2/M transition delay during vegetative growth","type":"exact"},{"name":"mitotic cell cycle delay at G2/M transition","type":"exact"},{"name":"mitotic cell cycle progression in G2 phase: decreased rate","type":"related"},{"name":"mitotic cell cycle progression in G2 phase: delayed","type":"related"},{"name":"mitotic cell cycle progression in G2 phase: increased duration","type":"related"},{"name":"reduced rate of mitotic G2 phase progression","type":"related"},{"name":"transient cell cycle arrest at mitotic G2/M phase transition","type":"related"},{"name":"transient cell cycle arrest in mitotic G2 phase","type":"related"}],"termid":"FYPO:0000012"}


id: GO:0018779
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-4,6-dihydroxy-1,3,5-triazine hydrolase activity (obsolete GO:0018779)","synonyms":[{"name":"2-chloro-4,6-dihydroxy-1,3,5-triazine hydrolase activity","type":"exact"}],"termid":"GO:0018779"}


id: PBO:0078706
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon CAG) 1-1","termid":"PBO:0078706"}


id: MONDO:0018508
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Any of the forms of small intestine carcinoma that have a rare incidence.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare carcinoma of small intestine (obsolete MONDO:0018508)","secondary_identifiers":["Orphanet:423957"],"synonyms":[{"name":"rare carcinoma of small bowel","type":"exact"},{"name":"rare small intestine carcinoma","type":"exact"}],"termid":"MONDO:0018508","xrefs":{"Monarch":{"xref_id":"0018508"}}}


id: MONDO:0009984
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A retinitis pigmentosa that is characterized by onset of symptoms in the fifth or sixth decade of life.","definition_xrefs":["PMID:1424244","DOID:0110421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"late-adult onset retinitis pigmentosa","secondary_identifiers":["MEDGEN:340316","ICD10CM:H35.5","UMLS:C1849400","GARD:15230","MESH:C564840","OMIM:268025"],"synonyms":[{"name":"retinitis pigmentosa, 'Senile'","type":"related"},{"name":"retinitis pigmentosa, late-ADULT onset","type":"related"},{"name":"senile retinitis pigmentosa","type":"exact"}],"termid":"MONDO:0009984","xrefs":{"Monarch":{"xref_id":"0009984"}}}


id: GO:0042586
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: formyl-L-methionyl peptide + H2O = formate + methionyl peptide.","definition_xrefs":["EC:3.5.1.88","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"peptide deformylase activity","secondary_identifiers":["MetaCyc:3.5.1.88-RXN","RHEA:24420"],"synonyms":[{"name":"PDF activity","type":"related"},{"name":"formyl-L-methionyl peptide amidohydrolase activity","type":"related"},{"name":"polypeptide deformylase activity","type":"related"}],"termid":"GO:0042586"}


id: PBO:0056852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma highly expressed competing endogenous lncRNA for miR-425 and miR-489","termid":"PBO:0056852"}


id: PBO:0050387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A3 pseudogene 11","termid":"PBO:0050387"}


id: PATO:0000590
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000590 relative thickness value (obsolete PATO:0000590)","termid":"PATO:0000590"}


id: GO:0046310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of 1,3-dichloro-2-propanol (DCP), a halohydrin suspected of being carcinogenic, mutagenic and genotoxic.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 1,3-dichloro-2-propanol catabolic process (obsolete GO:0046310)","synonyms":[{"name":"1,3-dichloro-2-propanol breakdown","type":"exact"},{"name":"1,3-dichloro-2-propanol catabolism","type":"exact"},{"name":"1,3-dichloro-2-propanol degradation","type":"exact"}],"termid":"GO:0046310"}


id: PBO:0077084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIFA inhibitor","termid":"PBO:0077084"}


id: GO:0002922
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of a humoral immune response.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of humoral immune response","termid":"GO:0002920"},{"relation_name":"is_a","term_name":"positive regulation of immune response","termid":"GO:0050778"},{"relation_name":"positively_regulates","term_name":"humoral immune response","termid":"GO:0006959"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of humoral immune response","synonyms":[{"name":"activation of humoral immune response","type":"narrow"},{"name":"stimulation of humoral immune response","type":"narrow"},{"name":"up regulation of humoral immune response","type":"exact"},{"name":"up-regulation of humoral immune response","type":"exact"},{"name":"upregulation of humoral immune response","type":"exact"}],"termid":"GO:0002922"}


id: PBO:0029571
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_spore_population","termid":"PBO:0029571"}


id: PBO:0111869
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PP2A","termid":"PBO:0111869"}


id: GO:0033316
data:
  {"annotated_genes":["SJAG_04259","SJAG_01837","SJAG_01082","SJAG_03327","SJAG_04126","SJAG_01330"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77330,118730],"is_not":false,"summary":null,"term":"GO:0033316"},{"annotations":[108345,116556],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[115847],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[103359],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905325"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a meiotic spindle assembly checkpoint, that delays the metaphase/anaphase transition of a meiotic cell cycle until the spindle is correctly assembled and chromosomes are attached to the spindle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic spindle checkpoint signaling","termid":"GO:0044779"},{"relation_name":"is_a","term_name":"spindle assembly checkpoint signaling","termid":"GO:0071173"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_01330":null,"SJAG_01837":null,"SJAG_03327":null,"SJAG_04126":null,"SJAG_04259":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0023052"],"is_obsolete":false,"name":"meiotic spindle assembly checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072465"],"synonyms":[{"name":"meiotic spindle assembly checkpoint","type":"exact"},{"name":"signal transduction involved in meiotic spindle assembly checkpoint","type":"exact"}],"termid":"GO:0033316","terms_by_termid":{"GO:0033316":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null}}


id: FYPO:0003500
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is viable, forms one or more branches near a septum, is elongated, and has more than one septum.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branched, elongated, multiseptate cell","termid":"FYPO:0000134"},{"relation_name":"is_a","term_name":"viable elongated multiseptate vegetative cell","termid":"FYPO:0001496"},{"relation_name":"is_a","term_name":"viable branched, elongated vegetative cell","termid":"FYPO:0002459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000032","FYPO:0000004","FYPO:0001985","FYPO:0000631","FYPO:0000005","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"viable branched, elongated, multiseptate vegetative cell","synonyms":[{"name":"viable branched, elongated, multiseptate cell during vegetative growth","type":"exact"},{"name":"viable branched, elongated, multiseptate vegetative cell during mitotic cell cycle","type":"related"},{"name":"viable branched, long, multiseptate cell","type":"exact"}],"termid":"FYPO:0003500"}


id: PR:O74460
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC16C4.16c gene.","definition_xrefs":["UniProtKB:O74460","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C16C4.16c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC16C4.16c","synonyms":[{"name":"Spom972h-SPCC16C4.16c","type":"exact"}],"termid":"PR:O74460"}


id: GO:0050346
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-L-3-hydroxyproline = 1-pyrroline-2-carboxylate + H2O + H+.","definition_xrefs":["EC:4.2.1.77","RHEA:10320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"trans-L-3-hydroxyproline dehydratase activity","secondary_identifiers":["MetaCyc:TRANS-L-3-HYDROXYPROLINE-DEHYDRATASE-RXN","KEGG_REACTION:R04374"],"synonyms":[{"name":"trans-L-3-hydroxyproline hydro-lyase (Delta1-pyrroline 2-carboxylate-forming)","type":"related"},{"name":"trans-L-3-hydroxyproline hydro-lyase activity","type":"related"}],"termid":"GO:0050346"}


id: PBO:0057323
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 519c","termid":"PBO:0057323"}


id: PBO:0048725
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 8 domain containing 1","termid":"PBO:0048725"}


id: PBO:0044716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 3 (pseudogene)","termid":"PBO:0044716"}


id: FYPO:0007866
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization during meiosis","termid":"FYPO:0003790"},{"relation_name":"is_a","term_name":"normal protein localization to cytoskeleton","termid":"FYPO:0004096"},{"relation_name":"is_a","term_name":"normal protein localization to spindle","termid":"FYPO:0007865"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle","synonyms":[{"name":"normal protein localisation to meiotic spindle","type":"exact"},{"name":"normal protein localization to spindle during meiosis","type":"exact"},{"name":"normal protein localization to spindle pole during meiotic nuclear division","type":"exact"}],"termid":"FYPO:0007866"}


id: MONDO:1010533
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gingival hypertrophy that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gingival hypertrophy, non-human animal","termid":"MONDO:1010038"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gingival hypertrophy, dog","secondary_identifiers":["OMIA:000409-9615"],"termid":"MONDO:1010533","xrefs":{"Monarch":{"xref_id":"1010533"}}}


id: FYPO:0005921
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:21437270","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4 acetylation during vegetative growth","termid":"FYPO:0002365"},{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation during vegetative growth","termid":"FYPO:0007631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere inner repeat during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at centromere imr during vegetative growth","type":"exact"},{"name":"increased histone H4-K12 acetylation at centromere inner repeat during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at centromere inner repeat region during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at centromere inner repeat during vegetative growth","type":"exact"}],"termid":"FYPO:0005921"}


id: PBO:0078842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Pro (anticodon TGG) 4-1","termid":"PBO:0078842"}


id: PBO:0049858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HECW1 intronic transcript 1","termid":"PBO:0049858"}


id: GO:1901447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of response to propan-1-ol.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of response to alcohol","termid":"GO:1901421"},{"relation_name":"is_a","term_name":"regulation of response to propan-1-ol","termid":"GO:1901445"},{"relation_name":"positively_regulates","term_name":"response to propan-1-ol","termid":"GO:1901427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to propan-1-ol","synonyms":[{"name":"activation of response to propan-1-ol","type":"narrow"},{"name":"up regulation of response to propan-1-ol","type":"exact"},{"name":"up-regulation of response to propan-1-ol","type":"exact"},{"name":"upregulation of response to propan-1-ol","type":"exact"}],"termid":"GO:1901447"}


id: GO:0007310
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the dorsal/ventral axis of the oocyte. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","ISBN:0879694238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oocyte axis specification","termid":"GO:0007309"},{"relation_name":"is_a","term_name":"dorsal/ventral axis specification","termid":"GO:0009950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"oocyte dorsal/ventral axis specification","secondary_identifiers":["GO:0008072","GO:0048123"],"synonyms":[{"name":"oocyte dorsal-ventral axis specification","type":"exact"},{"name":"oocyte dorsal/ventral axis determination","type":"related"},{"name":"oocyte dorsoventral axis specification","type":"exact"}],"termid":"GO:0007310"}


id: GO:0004144
data:
  {"annotated_genes":["SJAG_03609"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79004],"is_not":false,"summary":null,"term":"GO:0004144"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: acyl-CoA + 1,2-diacylglycerol = CoA + triacylglycerol.","definition_xrefs":["EC:2.3.1.20"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol O-acyltransferase activity","termid":"GO:0016411"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03609":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"diacylglycerol O-acyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:DIACYLGLYCEROL-O-ACYLTRANSFERASE-RXN","Reactome:R-HSA-1482889","Reactome:R-HSA-8848580","Reactome:R-HSA-75900","RHEA:10868","Reactome:R-HSA-549192"],"synonyms":[{"name":"1,2-diacylglycerol acyltransferase activity","type":"related"},{"name":"acyl-CoA:1,2-diacylglycerol O-acyltransferase activity","type":"related"},{"name":"diacylglycerol acyltransferase activity","type":"related"},{"name":"diglyceride O-acyltransferase activity","type":"related"},{"name":"diglyceride acyltransferase activity","type":"related"},{"name":"palmitoyl-CoA-sn-1,2-diacylglycerol acyltransferase activity","type":"related"}],"termid":"GO:0004144","terms_by_termid":{"GO:0004144":null}}


id: PBO:0069961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1255, pseudogene","termid":"PBO:0069961"}


id: SO:0001650
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant which does not cause a disruption of the translational reading frame.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein_altering_variant","termid":"SO:0001818"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inframe_variant","synonyms":[{"name":"ANNOVAR:nonframeshift block substitution","type":"related"},{"name":"ANNOVAR:nonframeshift substitution","type":"related"},{"name":"VAAST:inframe_variant","type":"exact"},{"name":"cds-indel","type":"exact"},{"name":"inframe variant","type":"exact"}],"termid":"SO:0001650"}


id: MONDO:0002989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm composed of fibroblastic spindle cells in a whorled storiform pattern. It is characterized by the presence of foam cells, inflammatory cells, hemosiderin deposition and stromal hemorrhage.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytoma","termid":"MONDO:0005509"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign fibrous histiocytoma","secondary_identifiers":["ICDO:8830/0","MEDGEN:60199","NCIT:C3739","UMLS:C0206644","DOID:4415","MESH:D018219"],"synonyms":[{"name":"benign fibrous histiocytoma","type":"exact"},{"name":"benign fibrous histiocytoma (morphologic abnormality)","type":"exact"},{"name":"fibrous histiocytoma","type":"exact"},{"name":"fibrous histiocytoma NOS (morphologic abnormality)","type":"exact"},{"name":"fibroxanthoma","type":"exact"},{"name":"fibroxanthoma NOS (morphologic abnormality)","type":"exact"},{"name":"histiocytoma, fibrous, benign","type":"exact"}],"termid":"MONDO:0002989","xrefs":{"Monarch":{"xref_id":"0002989"}}}


id: FYPO:0004738
data:
  {"alleles_by_uniquename":{"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_04280:allele-2":{"allele_type":"amino_acid_mutation","description":"T582G","gene_uniquename":"SJAG_04280","name":"wee1-as8","uniquename":"SJAG_04280:allele-2"},"SJAG_04522:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04522","name":"rga4delta","uniquename":"SJAG_04522:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121486],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}],"single_locus_phenotype":[{"annotations":[121366,121353],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0002998"},{"annotations":[121459],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0002026"},{"annotations":[121257,121427],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0000729"},{"annotations":[121487],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0001369"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which actin contractile ring organization is abnormal. The process normally results in the assembly, arrangement of constituent parts, or disassembly of the actomyosin contractile ring.","definition_xrefs":["GO:0044837","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actin cytoskeleton organization during vegetative growth","termid":"FYPO:0000801"},{"relation_name":"is_a","term_name":"abnormal cellular component assembly during vegetative growth","termid":"FYPO:0001354"},{"relation_name":"is_a","term_name":"abnormal cell cycle process","termid":"FYPO:0002734"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01143":null,"SJAG_02392":null,"SJAG_02592":null,"SJAG_04280":null,"SJAG_04522":null},"genotype_count":6,"genotypes_by_uniquename":{"mid1delta":{"display_name":"mid1delta","display_uniquename":"mid1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]}]},"mid1delta__pom1delta":{"display_name":"mid1delta pom1delta","display_uniquename":"mid1delta__pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01143:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"pom1delta":{"display_name":"pom1delta","display_uniquename":"pom1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02392:allele-1","expression":"Null"}]}]},"rga4delta":{"display_name":"rga4delta","display_uniquename":"rga4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]}]},"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"rga4delta wee1-as8(T582G aa)","display_uniquename":"rga4delta__wee1-as8-T582G-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04522:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_04280:allele-2","expression":"Not assayed or wild type"}]}]},"sty1delta":{"display_name":"sty1delta","display_uniquename":"sty1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02592:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01143","SJAG_04280","SJAG_02392","SJAG_04522"],"name":"abnormal actomyosin contractile ring organization","references_by_uniquename":{"PMID:25866389":null,"PMID:27059155":null,"PMID:30664646":null,"PMID:32915139":null,"PMID:33791858":null},"single_locus_annotated_genes":["SJAG_02592","SJAG_02392","SJAG_04522","SJAG_01143"],"single_locus_genotype_uniquenames":["mid1delta","rga4delta","pom1delta","sty1delta"],"synonyms":[{"name":"abnormal actomyosin contractile ring organisation","type":"exact"},{"name":"abnormal actomyosin contractile ring organization during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring organization during vegetative growth","type":"exact"},{"name":"abnormal contractile ring organization","type":"exact"},{"name":"abnormal mitotic contractile ring organization","type":"exact"}],"termid":"FYPO:0004738","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000126":null,"FYECO:0000137":null,"FYECO:0000162":null,"FYECO:0000248":null,"FYECO:0000338":null,"FYPO:0000729":null,"FYPO:0001369":null,"FYPO:0002026":null,"FYPO:0002998":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0003401
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth that results in the elongation of a line that defines polarity or symmetry in an anatomical structure.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axis elongation","synonyms":[{"name":"elongation of an axis","type":"related"}],"termid":"GO:0003401"}


id: PBO:0057849
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3160-2","termid":"PBO:0057849"}


id: PBO:0067382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 484, pseudogene","termid":"PBO:0067382"}


id: GO:0014013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gliogenesis, the formation of mature glia.","definition_xrefs":["GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neurogenesis","termid":"GO:0050767"},{"relation_name":"regulates","term_name":"gliogenesis","termid":"GO:0042063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of gliogenesis","termid":"GO:0014013"}


id: PBO:0028448
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_substrate_specificity","termid":"PBO:0028448"}


id: GO:0008800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a beta-lactam + H2O = a substituted beta-amino acid.","definition_xrefs":["EC:3.5.2.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amides","termid":"GO:0016812"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"beta-lactamase activity","secondary_identifiers":["RHEA:20401","MetaCyc:BETA-LACTAMASE-RXN"],"synonyms":[{"name":"ampicillinase activity","type":"related"},{"name":"beta-lactam hydrolase activity","type":"related"},{"name":"beta-lactamase A, B, C","type":"related"},{"name":"beta-lactamase AME I","type":"related"},{"name":"beta-lactamase I-III","type":"related"},{"name":"cephalosporin-beta-lactamase activity","type":"related"},{"name":"exopenicillinase activity","type":"related"},{"name":"neutrapen","type":"related"},{"name":"penicillin amido-beta-lactamhydrolase activity","type":"related"},{"name":"penicillin beta-lactamase activity","type":"related"},{"name":"penicillinase I, II","type":"related"}],"termid":"GO:0008800"}


id: GO:0018927
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine and threonine metabolic process (obsolete GO:0018927)","synonyms":[{"name":"methionine and threonine metabolic process","type":"exact"}],"termid":"GO:0018927"}


id: MONDO:0957476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"urogenital tract malformation","termid":"MONDO:0019356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isolated persistent urogenital sinus","secondary_identifiers":["MEDGEN:1843424","Orphanet:647794","UMLS:C5816754"],"termid":"MONDO:0957476","xrefs":{"Monarch":{"xref_id":"0957476"}}}


id: PR:O14325
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A nuclear valosin-containing protein-like that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR23077:SF16","OMA:SCHPO03059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized AAA domain-containing protein C16E9.10c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.10c","secondary_identifiers":["UniProtKB:O14325"],"synonyms":[{"name":"Spom972h-NVL","type":"exact"}],"termid":"PR:O14325"}


id: MONDO:0015189
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An adenocarcinoma that arises from the small intestine. Histologic variants include mucinous adenocarcinoma and signet ring cell carcinoma.","definition_xrefs":["NCIT:C7888"],"gene_count":0,"genotype_count":0,"name":"obsolete adenocarcinoma of small instestine (obsolete MONDO:0015189)","termid":"MONDO:0015189","xrefs":{"Monarch":{"xref_id":"0015189"}}}


id: PATO:0000036
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000036 water content (obsolete PATO:0000036)","termid":"PATO:0000036"}


id: GO:0006255
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP reduction (obsolete GO:0006255)","synonyms":[{"name":"UDP reduction","type":"exact"}],"termid":"GO:0006255"}


id: PBO:0089764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose-2,6-bisphosphate 2-phosphatase activity","termid":"PBO:0089764"}


id: PBO:0004863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prohibitin (predicted)","termid":"PBO:0004863"}


id: GO:1902031
data:
  {"annotated_genes":["SJAG_00685","SJAG_05314"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[78091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of NADP metabolic process.","definition_xrefs":["GOC:TermGenie","PMID:23334421"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of purine nucleotide metabolic process","termid":"GO:1900542"},{"relation_name":"regulates","term_name":"NADP+ metabolic process","termid":"GO:0006739"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of NADP metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of NAD phosphorylation and dephosphorylation","type":"related"},{"name":"regulation of NADP (oxidized) metabolic process","type":"exact"},{"name":"regulation of NADP (oxidized) metabolism","type":"exact"},{"name":"regulation of NADP (reduced) metabolic process","type":"exact"},{"name":"regulation of NADP (reduced) metabolism","type":"exact"},{"name":"regulation of NADP metabolism","type":"exact"},{"name":"regulation of NADPH metabolic process","type":"exact"},{"name":"regulation of NADPH metabolism","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"regulation of oxidized NADP metabolic process","type":"exact"},{"name":"regulation of oxidized NADP metabolism","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of oxidized nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"},{"name":"regulation of reduced NADP metabolic process","type":"exact"},{"name":"regulation of reduced NADP metabolism","type":"exact"},{"name":"regulation of reduced nicotinamide adenine dinucleotide phosphate metabolic process","type":"exact"},{"name":"regulation of reduced nicotinamide adenine dinucleotide phosphate metabolism","type":"exact"}],"termid":"GO:1902031","terms_by_termid":{"GO:0043456":null,"GO:1905857":null}}


id: MOD:01171
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-threonine residue to O-acetyl-L-threonine.","definition_xrefs":["PubMed:16728640","RESID:AA0423","Unimod:1#T"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetylated residue","termid":"MOD:00644"},{"relation_name":"is_a","term_name":"acetylated L-threonine","termid":"MOD:01186"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O-acetyl-L-threonine","synonyms":[{"name":"(2S,3R)-3-(acetyloxy)-2-aminobutanoic acid","type":"exact"},{"name":"ACT_SITE O-acetylthreonine intermediate","type":"exact"},{"name":"Acetylation","type":"related"},{"name":"MOD_RES O-acetylthreonine","type":"exact"},{"name":"O-acetyl-L-threonine","type":"exact"},{"name":"O-acetylthreonine","type":"exact"},{"name":"OAcThr","type":"exact"},{"name":"threonine acetate ester","type":"exact"}],"termid":"MOD:01171"}


id: GO:0009218
data:
  {"annotated_genes":["SJAG_00885","SJAG_00694","SJAG_03164","SJAG_00444","SJAG_04665","SJAG_04354","SJAG_00779","SJAG_04713","SJAG_02887","SJAG_00964","SJAG_05024","SJAG_03708","SJAG_00533","SJAG_00197","SJAG_04709","SJAG_03676"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[64420],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044210"},{"annotations":[57568,59713,61937,62934,60087],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044205"},{"annotations":[82363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[94446,109288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[69823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009224"},{"annotations":[65872],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006241"},{"annotations":[78405],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046036"},{"annotations":[69825,94980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044211"},{"annotations":[82362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[78404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"},{"annotations":[69824,93984,94981,89465,90461],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044206"},{"annotations":[65871],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006228"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a pyrimidine ribonucleotide, a compound consisting of nucleoside (a pyrimidine base linked to a ribose sugar) esterified with a phosphate group at either the 3' or 5'-hydroxyl group of the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine nucleotide metabolic process","termid":"GO:0006220"},{"relation_name":"is_a","term_name":"ribonucleotide metabolic process","termid":"GO:0009259"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00197":null,"SJAG_00444":null,"SJAG_00533":null,"SJAG_00694":null,"SJAG_00779":null,"SJAG_00885":null,"SJAG_00964":null,"SJAG_02887":null,"SJAG_03164":null,"SJAG_03676":null,"SJAG_03708":null,"SJAG_04354":null,"SJAG_04665":null,"SJAG_04709":null,"SJAG_04713":null,"SJAG_05024":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"pyrimidine ribonucleotide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"pyrimidine ribonucleotide metabolism","type":"exact"}],"termid":"GO:0009218","terms_by_termid":{"GO:0006225":null,"GO:0006228":null,"GO:0006241":null,"GO:0006256":null,"GO:0009224":null,"GO:0044205":null,"GO:0044206":null,"GO:0044210":null,"GO:0044211":null,"GO:0046036":null,"GO:0046704":null,"GO:0046705":null}}


id: GO:1904438
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of iron ions import across plasma membrane.","definition_xrefs":["GOC:BHF","GO_REF:0000058","GOC:TermGenie","PMID:18353247","GOC:kom"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of iron ion transmembrane transport","termid":"GO:0034759"},{"relation_name":"is_a","term_name":"regulation of cellular localization","termid":"GO:0060341"},{"relation_name":"regulates","term_name":"iron ion import across plasma membrane","termid":"GO:0098711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0098771"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0055085","GO:0098771","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of iron ion import across plasma membrane","secondary_identifiers":["GO:1903989"],"synonyms":[{"name":"regulation of ferrous ion import into cell","type":"related"},{"name":"regulation of ferrous iron import across plasma membrane","type":"related"},{"name":"regulation of ferrous iron import into cell","type":"related"}],"termid":"GO:1904438"}


id: PBO:0071656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L36 pseudogene 20","termid":"PBO:0071656"}


id: PBO:0064162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group III","termid":"PBO:0064162"}


id: PBO:0011171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HOPS/CORVET complex subunit, ubiquitin-protein ligase E3 (predicted)","termid":"PBO:0011171"}


id: PBO:0075747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 72 pseudogene 2","termid":"PBO:0075747"}


id: GO:0017064
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of a fatty acid amide to yield a fatty acid.","definition_xrefs":["PMID:15952893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"fatty acid amide hydrolase activity","secondary_identifiers":["EC:3.5.1.99","GO:0017073","GO:0102077","Reactome:R-HSA-5693742","Reactome:R-HSA-5693751","GO:0103073"],"synonyms":[{"name":"anandamide amidohydrolase activity","type":"narrow"},{"name":"oleamide hydrolase activity","type":"narrow"}],"termid":"GO:0017064"}


id: GO:1900133
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of renin secretion into blood stream.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of systemic arterial blood pressure","termid":"GO:0003073"},{"relation_name":"is_a","term_name":"regulation of endocrine process","termid":"GO:0044060"},{"relation_name":"is_a","term_name":"regulation of protein secretion","termid":"GO:0050708"},{"relation_name":"is_a","term_name":"regulation of renal system process","termid":"GO:0098801"},{"relation_name":"regulates","term_name":"renin secretion into blood stream","termid":"GO:0002001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of renin secretion into blood stream","synonyms":[{"name":"regulation of renin release into blood stream","type":"exact"}],"termid":"GO:1900133"}


id: MONDO:0001593
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"large intestine disorder","termid":"MONDO:0024634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"rectal disorder","secondary_identifiers":["UMLS:C0034882","ICD9:569.49","MEDGEN:19701","SCTID:5964004","MESH:D012002","DOID:1285","EFO:0009685"],"synonyms":[{"name":"disease of rectum","type":"exact"},{"name":"disease or disorder of rectum","type":"exact"},{"name":"disorder of rectum","type":"exact"},{"name":"rectal disorder","type":"exact"},{"name":"rectum disease","type":"exact"},{"name":"rectum disease or disorder","type":"exact"}],"termid":"MONDO:0001593","xrefs":{"Monarch":{"xref_id":"0001593"}}}


id: PBO:0091443
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Staurosporine-related Protein Kinase","termid":"PBO:0091443"}


id: GO:0000462
data:
  {"annotated_genes":["SJAG_03077","SJAG_02020","SJAG_04339","SJAG_04069","SJAG_03422","SJAG_00965","SJAG_04224","SJAG_01551","SJAG_00468","SJAG_03341","SJAG_02547","SJAG_04979","SJAG_04582","SJAG_05018","SJAG_04174","SJAG_02585","SJAG_01623","SJAG_00344","SJAG_00955","SJAG_02499","SJAG_04916","SJAG_03846","SJAG_01609","SJAG_02553","SJAG_01907","SJAG_00294","SJAG_03952","SJAG_02340","SJAG_02358","SJAG_00897","SJAG_03234","SJAG_00772","SJAG_04998","SJAG_00572","SJAG_05187","SJAG_01347","SJAG_02861","SJAG_03796","SJAG_00562","SJAG_00879","SJAG_02644","SJAG_03569","SJAG_00069","SJAG_03425","SJAG_02702","SJAG_00945","SJAG_02250","SJAG_00503","SJAG_06613","SJAG_04908","SJAG_02821","SJAG_01604","SJAG_04033","SJAG_04029","SJAG_04524","SJAG_04188"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63095,63668,63846,65676,66574,67690,72751,73508,73545,73673,74774,74862,75022,75234,76369,77142,77152,77187,77817,78299,79012,80024,80417,81196,81700,82046,82330,89830,91246,93240,99046,107433,111135,116780],"is_not":false,"summary":null,"term":"GO:0000462"},{"annotations":[79906,72304,74864],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000480"},{"annotations":[111044,73177,74868,98799,72310,116261,98510,105144,61108,106796,117454,96720,106579,80238,76480,107682,73861,115547,117366,120675,107683],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000447"},{"annotations":[76481],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000461"},{"annotations":[111045,79905,72303,74863],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000472"}]},"cv_name":"biological_process","definition":"Any process involved in the maturation of a precursor Small SubUnit (SSU) ribosomal RNA (rRNA) molecule into a mature SSU-rRNA molecule from the pre-rRNA molecule originally produced as a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, 5.8S rRNA, and the Large Subunit (LSU) in that order from 5' to 3' along the primary transcript.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturation of SSU-rRNA","termid":"GO:0030490"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00069":null,"SJAG_00294":null,"SJAG_00344":null,"SJAG_00468":null,"SJAG_00503":null,"SJAG_00562":null,"SJAG_00572":null,"SJAG_00772":null,"SJAG_00879":null,"SJAG_00897":null,"SJAG_00945":null,"SJAG_00955":null,"SJAG_00965":null,"SJAG_01347":null,"SJAG_01551":null,"SJAG_01604":null,"SJAG_01609":null,"SJAG_01623":null,"SJAG_01907":null,"SJAG_02020":null,"SJAG_02250":null,"SJAG_02340":null,"SJAG_02358":null,"SJAG_02499":null,"SJAG_02547":null,"SJAG_02553":null,"SJAG_02585":null,"SJAG_02644":null,"SJAG_02702":null,"SJAG_02821":null,"SJAG_02861":null,"SJAG_03077":null,"SJAG_03234":null,"SJAG_03341":null,"SJAG_03422":null,"SJAG_03425":null,"SJAG_03569":null,"SJAG_03796":null,"SJAG_03846":null,"SJAG_03952":null,"SJAG_04029":null,"SJAG_04033":null,"SJAG_04069":null,"SJAG_04174":null,"SJAG_04188":null,"SJAG_04224":null,"SJAG_04339":null,"SJAG_04524":null,"SJAG_04582":null,"SJAG_04908":null,"SJAG_04916":null,"SJAG_04979":null,"SJAG_04998":null,"SJAG_05018":null,"SJAG_05187":null,"SJAG_06613":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042254","GO:0010467","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:1990041"],"synonyms":[{"name":"maturation of 18S rRNA","type":"narrow"}],"termid":"GO:0000462","terms_by_termid":{"GO:0000447":null,"GO:0000461":null,"GO:0000462":null,"GO:0000472":null,"GO:0000480":null}}


id: FYPO:0001512
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype observed in the vegetative growth phase of the life cycle in which a cell is branched and elongated.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"has_part","term_name":"elongated vegetative cell","termid":"FYPO:0001122"},{"relation_name":"is_a","term_name":"branched vegetative cell","termid":"FYPO:0000015"},{"relation_name":"is_a","term_name":"elongated vegetative cell","termid":"FYPO:0001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"branched, elongated cell","synonyms":[{"name":"branched, elongated cell during mitotic cell cycle","type":"related"},{"name":"branched, elongated cell during vegetative growth","type":"exact"},{"name":"branched, elongated vegetative cell","type":"exact"},{"name":"branched, long cell","type":"exact"}],"termid":"FYPO:0001512"}


id: PBO:0038798
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 3B (pseudogene)","termid":"PBO:0038798"}


id: PBO:0075623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SREBF pathway regulator in golgi 1","termid":"PBO:0075623"}


id: PBO:0058522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5787","termid":"PBO:0058522"}


id: PBO:0067242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 314, pseudogene","termid":"PBO:0067242"}


id: GO:1903715
data:
  {"annotated_genes":["SJAG_01062","SJAG_02592","SJAG_00698","SJAG_02433"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96385,99636,111736,113935],"is_not":false,"summary":null,"term":"GO:1903715"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of aerobic respiration.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:19266076"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular respiration","termid":"GO:0043457"},{"relation_name":"regulates","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00698":null,"SJAG_01062":null,"SJAG_02433":null,"SJAG_02592":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"regulation of aerobic respiration","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1903715","terms_by_termid":{"GO:1903715":null}}


id: GO:1900713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of violaceol I biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolite biosynthetic process","termid":"GO:1900376"},{"relation_name":"regulates","term_name":"violaceol I biosynthetic process","termid":"GO:1900590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"regulation of violaceol I biosynthetic process","synonyms":[{"name":"regulation of violaceol I anabolism","type":"exact"},{"name":"regulation of violaceol I biosynthesis","type":"exact"},{"name":"regulation of violaceol I formation","type":"exact"},{"name":"regulation of violaceol I synthesis","type":"exact"}],"termid":"GO:1900713"}


id: GO:1990683
data:
  {"annotated_genes":["SJAG_04142","SJAG_02837","SJAG_01538"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77899,81264,98726],"is_not":false,"summary":null,"term":"GO:1990683"}]},"cv_name":"biological_process","definition":"A process in which the DNA double-strand breaks are attached to the inner surface of the nuclear envelope proximal to the spindle pole body, or iMTOCs.","definition_xrefs":["PMID:24943839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome attachment to the nuclear envelope","termid":"GO:0097240"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01538":null,"SJAG_02837":null,"SJAG_04142":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0007049"],"is_obsolete":false,"name":"DNA double-strand break attachment to nuclear envelope","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990683","terms_by_termid":{"GO:1990683":null}}


id: PBO:0063814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pleckstrin homology like domain family A member 1","termid":"PBO:0063814"}


id: PR:000027503
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitogen-activated protein kinase sty1 phosphorylated 1 in Schizosaccharomyces pombe. Phosphorylated on TxY motif by MAPK kinase (Wis1). Example: UniProtKB:Q09892-1, Thr-171, MOD:00047|Tyr-173, MOD:00048.","definition_xrefs":["PMID:20729203","PomBase:MAH","PMID:7501024","PMID:9251044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitogen-activated protein kinase HOG1","termid":"PR:000027499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sty1/Phos(T171,Y173)","pombase_gene_id":"SPAC24B11.06c","synonyms":[{"name":"PomBase_original_PRO_term_name: mitogen-activated protein kinase sty1 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-HOG1/Phos:1","type":"exact"},{"name":"active PHH1","type":"exact"},{"name":"active spc1","type":"exact"},{"name":"active sty1","type":"exact"},{"name":"sty1/Phos(T171,Y173)","type":"exact"}],"termid":"PR:000027503"}


id: PBO:0013070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxin-2 homolog","termid":"PBO:0013070"}


id: GO:0070958
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the directed killing of a gram-positive bacterium by a neutrophil.","definition_xrefs":["GOC:mah","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of neutrophil mediated killing of gram-positive bacterium","termid":"GO:0070952"},{"relation_name":"is_a","term_name":"negative regulation of neutrophil mediated killing of bacterium","termid":"GO:0070956"},{"relation_name":"negatively_regulates","term_name":"neutrophil-mediated killing of gram-positive bacterium","termid":"GO:0070946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of neutrophil mediated killing of gram-positive bacterium","synonyms":[{"name":"down regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"down-regulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"downregulation of neutrophil mediated killing of gram-positive bacterium","type":"exact"},{"name":"inhibition of neutrophil mediated killing of gram-positive bacterium","type":"narrow"}],"termid":"GO:0070958"}


id: GO:0014031
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process aimed at the progression of a mesenchymal cell over time, from initial commitment of the cell to its specific fate, to the fully functional differentiated cell.","definition_xrefs":["GOC:dh","GOC:ef"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"mesenchymal cell differentiation","termid":"GO:0048762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchymal cell development","termid":"GO:0014031"}


id: PBO:0003530
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human BIN3","termid":"PBO:0003530"}


id: SO:0001108
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of three residues within a beta-sheet consisting of two H-bonds. Beta bulge loops often occur at the loop ends of beta-hairpins.","definition_xrefs":["EBIBS:GAR","Http://www.ebi.ac.uk/msd-srv/msdmotif/"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"beta_bulge_loop","secondary_identifiers":["BS:00209"],"synonyms":[{"name":"beta bulge loop","type":"exact"}],"termid":"SO:0001108"}


id: PR:O13679
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC737.05 gene.","definition_xrefs":["UniProtKB:O13679","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C737.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC737.05","synonyms":[{"name":"Spom972h-SPCC737.05","type":"exact"}],"termid":"PR:O13679"}


id: MONDO:0100507
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Temple syndrome is a less specific phenotype including intrauterine and postnatal growth restriction, hypotonia, feeding difficulties in infancy, truncal obesity, and small feet and hands. Temple syndrome is caused by defects or absence of paternally derived imprinting signals (including maternal UPD14).","definition_xrefs":["PMID:34760887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies due to 14q32.2 imprinting defect","termid":"MONDO:0100499"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multiple congenital anomalies due to 14q32.2 paternally expressed gene defect","synonyms":[{"name":"Temple syndrome","type":"broad"}],"termid":"MONDO:0100507","xrefs":{"Monarch":{"xref_id":"0100507"}}}


id: PBO:0056544
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MCF2L2 pseudogene 1","termid":"PBO:0056544"}


id: PBO:0030235
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_immediate_intracellular_calcium_spike_following_extracellular_calcium_stimulus","termid":"PBO:0030235"}


id: PBO:0054124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1490","termid":"PBO:0054124"}


id: PBO:0029491
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormally_arrested_meiotic_cell_cycle","termid":"PBO:0029491"}


id: PBO:0028659
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_anaphase-promoting_complex_binding","termid":"PBO:0028659"}


id: MONDO:0013106
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"skin basal cell carcinoma","termid":"MONDO:0005341"},{"relation_name":"is_a","term_name":"basal cell carcinoma, susceptibility to","termid":"MONDO:0100047"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal cell carcinoma, susceptibility to, 6","secondary_identifiers":["OMIM:613063","UMLS:C2751600","MEDGEN:414059"],"synonyms":[{"name":"BCC6","type":"exact"},{"name":"basal cell carcinoma, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0013106","xrefs":{"Monarch":{"xref_id":"0013106"}}}


id: MONDO:0026771
data:
  {"annotated_genes":["SJAG_01831"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87870],"is_not":false,"summary":null,"term":"MONDO:0026771"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01831":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 85, with or without midline brain defects","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:301044","DOID:0070380","UMLS:C5393312","MEDGEN:1708832"],"synonyms":[{"name":"DEE85, with or without midline brain defects","type":"exact"},{"name":"EIEE85","type":"exact"},{"name":"developmental and epileptic encephalopathy 85, with or without midline brain defects, X-linked dominant","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 85, with or without midline brain defects","type":"exact"}],"termid":"MONDO:0026771","terms_by_termid":{"MONDO:0026771":null},"xrefs":{"Monarch":{"xref_id":"0026771"}}}


id: PBO:0116749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related BAF chromatin remodeling complex subunit C1","termid":"PBO:0116749"}


id: PBO:0049469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GDNF inducible zinc finger protein 1","termid":"PBO:0049469"}


id: PBO:0003594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone H3 h3.2","termid":"PBO:0003594"}


id: PBO:0027642
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transcription_of_pheromone_response_gene_mRNA_during_vegetative_growth","termid":"PBO:0027642"}


id: GO:0002110
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The insertion of one or two non-coded nucleotides during the transcription of a mitochondrial rRNA. Such additions are known to occur in myxomycetes such as Physarum, Didymium, and Stemonitis.","definition_xrefs":["GOC:curators","PMID:8306965","ISBN:1555811337"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA modification","termid":"GO:0000154"},{"relation_name":"is_a","term_name":"RNA nucleotide insertion","termid":"GO:0070705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0042254","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"cotranscriptional mitochondrial rRNA nucleotide insertion","termid":"GO:0002110"}


id: PBO:0039439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat and fibronectin type III domain containing 1","termid":"PBO:0039439"}


id: PBO:0116789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CERK like autophagy regulator","termid":"PBO:0116789"}


id: PBO:0091289
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human EIF3H","termid":"PBO:0091289"}


id: SO:0002124
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that rearranges at the DNA level and codes the diversity region of the variable domain of an immunoglobuin (IG) gene.","definition_xrefs":["GENCODE:http://www.gencodegenes.org/gencode_biotypes.html","IGMT:http://www.imgt.org/IMGTScientificChart/SequenceDescription/Keywords.php"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin_gene","termid":"SO:0002122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IG_D_gene","synonyms":[{"name":"IGD_gene","type":"exact"},{"name":"Immunoglobulin_Diversity_ gene","type":"exact"},{"name":"immunoglobulin_D_gene","type":"exact"}],"termid":"SO:0002124"}


id: PBO:0092008
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small subunit (15S) rRNA, rns","termid":"PBO:0092008"}


id: PATO:0001844
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An acidity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"acidity","termid":"PATO:0001842"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased acidity","synonyms":[{"name":"high acidity","type":"exact"}],"termid":"PATO:0001844"}


id: MONDO:0021582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A flat, benign, pigmented spot on the skin caused by excessive deposition of melanin from an increased number of melanocytes in the cell layer directly above the basement membrane of the epidermis. Formation is usually related to sun exposure during youth, and the lesions do not typically progress to malignancy.","definition_xrefs":["NCIT:C3159"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"hereditary skin disorder","termid":"MONDO:0100118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"lentigo","secondary_identifiers":["OMIM:150900","UMLS:C0023321","MEDGEN:7301","MESH:D007911","SCTID:402624000"],"synonyms":[{"name":"lentigines","type":"exact"},{"name":"lentiginosis","type":"exact"},{"name":"lentigo","type":"exact"}],"termid":"MONDO:0021582","xrefs":{"Monarch":{"xref_id":"0021582"}}}


id: PBO:0078734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Met (anticodon CAT) 6-1","termid":"PBO:0078734"}


id: PBO:0086126
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for function of the Sit4p protein phosphatase; member of a family of similar proteins that form complexes with Sit4p, including Sap155p, Sap185p, and Sap190p; SAP4 has a paralog, SAP155, that arose from the whole genome duplication","termid":"PBO:0086126"}


id: PBO:0053949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1254","termid":"PBO:0053949"}


id: GO:0030526
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The heterodimeric receptor for granulocyte macrophage colony-stimulating factor.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"granulocyte macrophage colony-stimulating factor receptor complex","synonyms":[{"name":"GM-CSF receptor complex","type":"exact"},{"name":"granulocyte macrophage colony stimulating factor receptor complex","type":"exact"}],"termid":"GO:0030526"}


id: _global:added_during
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a biological phase or process during which the modification is actively added.","definition_xrefs":["PomBase:al"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"added_during","termid":"_global:added_during"}


id: FYPO:0006696
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of S-adenosyl-L-homocysteine (SAH) measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular amino acid level","termid":"FYPO:0003985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular S-adenosyl-L-homocysteine level during vegetative growth","synonyms":[{"name":"decreased S-adenosyl-L-homocysteine accumulation during vegetative growth","type":"related"},{"name":"decreased cellular S-adenosyl-L-homocysteine level during mitotic cell cycle","type":"related"},{"name":"decreased cellular S-adenosylhomocysteine level during vegetative growth","type":"exact"},{"name":"decreased cellular SAH level during vegetative growth","type":"exact"},{"name":"reduced cellular S-adenosyl-L-homocysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0006696"}


id: PBO:0075881
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ST3 beta-galactoside alpha-2,3-sialyltransferase 6","termid":"PBO:0075881"}


id: GO:0051109
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: CoA + crotono-betaine + ATP = AMP + diphosphate + crotonobetainyl-CoA.","definition_xrefs":["MetaCyc:CROTCOALIG-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CoA-ligase activity","termid":"GO:0016405"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"crotonobetaine-CoA ligase activity","secondary_identifiers":["RHEA:30079"],"synonyms":[{"name":"crotonobetaine-CoA synthase activity","type":"exact"},{"name":"crotonobetaine/carnitine-CoA ligase activity","type":"broad"}],"termid":"GO:0051109"}


id: MONDO:0004327
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A papilloma that arises from the ciliated respiratory mucosa that lines the sphenoid sinus. It is classified as inverted papilloma and oncocytic papilloma.","definition_xrefs":["NCIT:C6838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"paranasal sinus Schneiderian papilloma","termid":"MONDO:0006353"},{"relation_name":"is_a","term_name":"benign neoplasm of sphenoidal sinus","termid":"MONDO:0021477"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sphenoid sinus Schneiderian papilloma","secondary_identifiers":["MEDGEN:277659","DOID:7679","UMLS:C1336038"],"synonyms":[{"name":"Schneiderian papilloma of sphenoid sinus","type":"related"},{"name":"Schneiderian papilloma of the sphenoid sinus","type":"exact"},{"name":"sphenoid sinus Schneiderian papilloma","type":"exact"}],"termid":"MONDO:0004327","xrefs":{"Monarch":{"xref_id":"0004327"}}}


id: PBO:0059433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A4A","termid":"PBO:0059433"}


id: MONDO:1012096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hemolytic anemia, non-human animal","termid":"MONDO:1011689"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemolytic anemia, cattle","secondary_identifiers":["OMIA:000430-9913"],"termid":"MONDO:1012096","xrefs":{"Monarch":{"xref_id":"1012096"}}}


id: MONDO:0011637
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sener syndrome","secondary_identifiers":["MESH:C537579","MEDGEN:342924","UMLS:C1853616","OMIM:606156"],"synonyms":[{"name":"Sener syndrome","type":"exact"},{"name":"frontonasal dysplasia and dilated Virchow-Robin spaces","type":"related"},{"name":"polycystic brain (cerebrum polycystica vera) associated with ectodermal dysplasia","type":"related"}],"termid":"MONDO:0011637","xrefs":{"Monarch":{"xref_id":"0011637"}}}


id: MONDO:0859004
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fungal infectious disease","termid":"MONDO:0002041"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"invasive scopulariopsis infection","secondary_identifiers":["Orphanet:633124","MEDGEN:1843422","UMLS:C5816808"],"termid":"MONDO:0859004","xrefs":{"Monarch":{"xref_id":"0859004"}}}


id: SO:0001396
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified isoleucine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_isoleucine","secondary_identifiers":["MOD:00910"],"synonyms":[{"name":"ModIle","type":"exact"},{"name":"modified L isoleucine","type":"exact"},{"name":"modified L-isoleucine","type":"exact"}],"termid":"SO:0001396"}


id: MONDO:1012233
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"quaking, non-human animal","termid":"MONDO:1011629"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaking, golden hamster","secondary_identifiers":["OMIA:000846-10036"],"termid":"MONDO:1012233","xrefs":{"Monarch":{"xref_id":"1012233"}}}


id: PBO:0058288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4663","termid":"PBO:0058288"}


id: FYPO:0000708
data:
  {"alleles_by_uniquename":{"SJAG_00266:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00266","name":"atf1delta","uniquename":"SJAG_00266:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121600],"is_not":false,"summary":null,"term":"FYPO:0000708"}]},"cv_name":"fission_yeast_phenotype","definition":"A biological process phenotype in which the observed mating efficiency, as determined by counting zygotes, asci, and sometimes spores, is lower than normal.","definition_xrefs":["PMID:15300681","PomBase:mah","PomBase:al","PMID:16598689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00266":null},"genotype_count":1,"genotypes_by_uniquename":{"atf1delta":{"display_name":"atf1delta","display_uniquename":"atf1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00266:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"decreased mating efficiency","references_by_uniquename":{"PMID:31150379":null},"single_locus_annotated_genes":["SJAG_00266"],"single_locus_genotype_uniquenames":["atf1delta"],"synonyms":[{"name":"mating efficiency: decreased","type":"related"},{"name":"reduced mating efficiency","type":"exact"}],"termid":"FYPO:0000708","terms_by_termid":{"FYECO:0000272":null,"FYPO:0000708":null,"FYPO_EXT:0000001":null}}


id: MONDO:0017680
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive disease associated with punctate palmoplantar keratoderma as a major feature (obsolete MONDO:0017680)","secondary_identifiers":["Orphanet:308041"],"synonyms":[{"name":"autosomal recessive disease associated with punctate palmoplantar hyperkeratosis as a major feature","type":"exact"}],"termid":"MONDO:0017680","xrefs":{"Monarch":{"xref_id":"0017680"}}}


id: MONDO:0022765
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chronic demyelinizing neuropathy with IgM monoclonal","termid":"MONDO:0022765","xrefs":{"Monarch":{"xref_id":"0022765"}}}


id: GO:2000611
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of thyroid hormone generation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of hormone metabolic process","termid":"GO:0032352"},{"relation_name":"is_a","term_name":"regulation of thyroid hormone generation","termid":"GO:2000609"},{"relation_name":"positively_regulates","term_name":"thyroid hormone generation","termid":"GO:0006590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of thyroid hormone generation","termid":"GO:2000611"}


id: MONDO:0008745
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism type 1A (OCA1A) is the most severe form of OCA, where no melanin is produced, and is characterized by white hair and skin, blue, fully translucent irises, nystagmus and misrouting of the optic nerves.","definition_xrefs":["Orphanet:79431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism type 1","termid":"MONDO:0018135"},{"relation_name":"is_a","term_name":"autosomal recessive ocular albinism","termid":"MONDO:0040653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0005093","MONDO:0006025","MONDO:0004736"],"is_obsolete":false,"name":"oculocutaneous albinism type 1A","secondary_identifiers":["SCTID:6483008","UMLS:C4551504","MEDGEN:1643910","NCIT:C168731","OMIM:203100","DOID:0070094","GARD:16721","icd11.foundation:1168847652","ICD9:270.2"],"synonyms":[{"name":"OCA1A","type":"exact"},{"name":"TYR oculocutaneous albinism","type":"exact"},{"name":"Tyr oculocutaneous albinism","type":"exact"},{"name":"albinism 1","type":"related"},{"name":"albinism, oculocutaneous, type 1A","type":"related"},{"name":"albinism, oculocutaneous, type IA","type":"related"},{"name":"oculocutaneous albinism caused by mutation in TYR","type":"exact"},{"name":"oculocutaneous albinism caused by mutation in Tyr","type":"exact"},{"name":"oculocutaneous albinism type IA","type":"related"},{"name":"oculocutaneous albinism, type 1","type":"related"},{"name":"oculocutaneous albinism, tyrosinase-negative","type":"exact"},{"name":"tyrosinase-negative oculocutaneous albinism","type":"exact"}],"termid":"MONDO:0008745","xrefs":{"Monarch":{"xref_id":"0008745"}}}


id: PBO:0079487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thioredoxin domain containing 5","termid":"PBO:0079487"}


id: PBO:0080996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 32","termid":"PBO:0080996"}


id: PBO:0012065
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-F/3-ketosphinganine reductase fusion protein (predicted)","termid":"PBO:0012065"}


id: GO:0051002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the joining of a metal ion to a molecule via a nitrogen-metal bond, with the concomitant hydrolysis of the diphosphate bond in ATP or a similar triphosphate.","definition_xrefs":["EC:6.6.-.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity","termid":"GO:0016874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"ligase activity, forming nitrogen-metal bonds","termid":"GO:0051002"}


id: GO:0080102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-methylthiopropyl-glucosinolate = 3-methylsulfinylpropyl-glucosinolate.","definition_xrefs":["PMID:18799661"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-methylthiopropyl glucosinolate S-oxygenase activity","secondary_identifiers":["MetaCyc:RXN-2221"],"termid":"GO:0080102"}


id: MONDO:0018681
data:
  {"annotated_genes":["SJAG_04825"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86977],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014700"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome-intellectual disability","termid":"MONDO:0015159"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04825":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320","MONDO:0005497"],"is_obsolete":false,"name":"neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17785","Orphanet:453499"],"synonyms":[{"name":"neurodevelopmental disorder-craniofacial dysmorphism-cardiac defect-hip dysplasia syndrome","type":"exact"}],"termid":"MONDO:0018681","terms_by_termid":{"MONDO:0014700":null},"xrefs":{"Monarch":{"xref_id":"0018681"}}}


id: PBO:0081945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc and ring finger 1","termid":"PBO:0081945"}


id: GO:0006625
data:
  {"annotated_genes":["SJAG_04763","SJAG_00891","SJAG_02693","SJAG_03781","SJAG_00326"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92435,92443,97442,98967,105112],"is_not":false,"summary":null,"term":"GO:0006625"}]},"cv_name":"biological_process","definition":"The process of directing proteins towards the peroxisome, usually using signals contained within the protein.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein targeting","termid":"GO:0006605"},{"relation_name":"is_a","term_name":"establishment of protein localization to peroxisome","termid":"GO:0072663"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00326":null,"SJAG_00891":null,"SJAG_02693":null,"SJAG_03781":null,"SJAG_04763":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006605"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006605","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein targeting to peroxisome","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"protein-peroxisome targeting","type":"exact"}],"termid":"GO:0006625","terms_by_termid":{"GO:0006625":null}}


id: GO:0045322
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to uan nmethylated CpG motif. Unmethylated CpG dinucleotides are often associated with gene promoters.","definition_xrefs":["GOC:ai","PMID:10688657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence-specific DNA binding","termid":"GO:0043565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"unmethylated CpG binding","termid":"GO:0045322"}


id: FYECO:0000340
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which an iron chelator was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ iron chelator","termid":"FYECO:0000340"}


id: PBO:0042968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 5","termid":"PBO:0042968"}


id: PBO:0046824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 3","termid":"PBO:0046824"}


id: MONDO:0016066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sternal cleft (SC) is a rare idiopathic congenital thoracic malformation characterized by a sternal fusion defect, that can be complete or partial (either superior or inferior), that is usually asymptomatic in the neonatal period (apart from a paradoxical midline thoracic bulging) but that can lead to dyspnea, cough, frequent respiratory infections and increased risk of trauma-related injury to the heart, lungs and major vessels if left untreated.","definition_xrefs":["Orphanet:2017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sternal cleft","secondary_identifiers":["GARD:5012","icd11.foundation:1308914573","ICD9:756.3","MEDGEN:419096","MESH:C537489","SCTID:54008006","UMLS:C2931507"],"synonyms":[{"name":"cleft sternum","type":"exact"},{"name":"congenital sternal cleft","type":"related"},{"name":"sternum bifidum","type":"exact"}],"termid":"MONDO:0016066","xrefs":{"Monarch":{"xref_id":"0016066"}}}


id: MONDO:1010582
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial goiter that occurs in water buffalo.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial goiter, non-human animal","termid":"MONDO:1010053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial goiter, water buffalo","secondary_identifiers":["OMIA:000424-89462"],"termid":"MONDO:1010582","xrefs":{"Monarch":{"xref_id":"1010582"}}}


id: FYPO:0002571
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dGTP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular dNTP level","termid":"FYPO:0006401"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular dGTP level","synonyms":[{"name":"decreased cellular dGTP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dGTP level during vegetative growth","type":"exact"},{"name":"reduced cellular dGTP level","type":"exact"}],"termid":"FYPO:0002571"}


id: PBO:0047160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 186 member B","termid":"PBO:0047160"}


id: GO:1900619
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving an acetate ester, any carboxylic ester where the carboxylic acid component is acetic acid.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acetate ester metabolic process","synonyms":[{"name":"acetate ester metabolism","type":"exact"},{"name":"acetyl ester metabolic process","type":"exact"},{"name":"acetyl ester metabolism","type":"exact"}],"termid":"GO:1900619"}


id: GO:0030440
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mcc"],"gene_count":0,"genotype_count":0,"name":"obsolete activation of MAPKK during sporulation (sensu Fungi) (obsolete GO:0030440)","synonyms":[{"name":"activation of MAPKK during sporulation (sensu Fungi)","type":"exact"}],"termid":"GO:0030440"}


id: MOD:00830
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to an N-methyl-L-proline.","definition_xrefs":["PubMed:3127388","RESID:AA0419"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated proline","termid":"MOD:01417"},{"relation_name":"is_a","term_name":"N-methylated proline","termid":"MOD:01462"},{"relation_name":"is_a","term_name":"alpha-amino monomethylated residue","termid":"MOD:01680"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methyl-L-proline","synonyms":[{"name":"(S)-1-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"1-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"MOD_RES N-methylproline","type":"exact"},{"name":"N-methyl-L-proline","type":"exact"},{"name":"N-methylated L-proline","type":"exact"},{"name":"NMePro","type":"exact"},{"name":"hygric acid","type":"exact"}],"termid":"MOD:00830"}


id: PBO:0057520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 638","termid":"PBO:0057520"}


id: GO:0034041
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: ATP + H2O + sterol(in) = ADP + phosphate + sterol(out).","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled lipid transmembrane transporter activity","termid":"GO:0034040"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"ABC-type sterol transporter activity","secondary_identifiers":["Reactome:R-HSA-5679145","Reactome:R-HSA-265783","Reactome:R-HSA-5679101"],"synonyms":[{"name":"ATP-coupled sterol transmembrane transporter activity","type":"related"},{"name":"ATP-dependent sterol transmembrane transporter activity","type":"related"},{"name":"ATPase-coupled sterol transmembrane transporter activity","type":"related"},{"name":"sterol-transporting ATPase activity","type":"related"}],"termid":"GO:0034041"}


id: GO:0071791
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 5.","definition_xrefs":["GOC:add","GOC:amm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 5 binding","synonyms":[{"name":"CCL5 binding","type":"exact"},{"name":"RANTES binding","type":"exact"},{"name":"Regulated upon Activation, Normal T-cell Expressed, and Secreted binding","type":"exact"}],"termid":"GO:0071791"}


id: PR:Q09822
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc15 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09822"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 15 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G8.05c","synonyms":[{"name":"Spom972h-cdc15","type":"exact"}],"termid":"PR:Q09822"}


id: MONDO:0011538
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"frontoocular syndrome","secondary_identifiers":["OMIM:605321","MESH:C565340","MEDGEN:344278","UMLS:C1854405"],"synonyms":[{"name":"frontoocular syndrome","type":"exact"}],"termid":"MONDO:0011538","xrefs":{"Monarch":{"xref_id":"0011538"}}}


id: GO:0006862
data:
  {"annotated_genes":["SJAG_04328","SJAG_00612","SJAG_03334","SJAG_00760","SJAG_02050","SJAG_03503","SJAG_00154"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[76666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015866"},{"annotations":[64919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903790"},{"annotations":[103381],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990554"},{"annotations":[103382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990553"},{"annotations":[59419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140021"},{"annotations":[104872,59418],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990544"},{"annotations":[109595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990548"},{"annotations":[94915],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990549"},{"annotations":[81134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990519"}]},"cv_name":"biological_process","definition":"The directed movement of a nucleotide, any compound consisting of a nucleoside that is esterified with (ortho)phosphate, into, out of or within a cell.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organophosphate ester transport","termid":"GO:0015748"},{"relation_name":"is_a","term_name":"nucleobase-containing compound transport","termid":"GO:0015931"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03503":null,"SJAG_04328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"nucleotide transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"termid":"GO:0006862","terms_by_termid":{"GO:0015866":null,"GO:0140021":null,"GO:1903790":null,"GO:1990519":null,"GO:1990544":null,"GO:1990548":null,"GO:1990549":null,"GO:1990553":null,"GO:1990554":null}}


id: MONDO:0013255
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any arthrogryposis-renal dysfunction-cholestasis syndrome in which the cause of the disease is a mutation in the VIPAS39 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"arthrogryposis-renal dysfunction-cholestasis syndrome","termid":"MONDO:0017123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"arthrogryposis, renal dysfunction, and cholestasis 2","secondary_identifiers":["UMLS:C3150672","DOID:0111354","GARD:15658","MEDGEN:462022","OMIM:613404"],"synonyms":[{"name":"ARCS2","type":"related"},{"name":"VIPAS39 arthrogryposis-renal dysfunction-cholestasis syndrome","type":"exact"},{"name":"arthrogryposis, renal dysfunction, and cholestasis 2","type":"exact"},{"name":"arthrogryposis, renal dysfunction, and cholestasis type 2","type":"exact"},{"name":"arthrogryposis-renal dysfunction-cholestasis syndrome caused by mutation in VIPAS39","type":"exact"}],"termid":"MONDO:0013255","xrefs":{"Monarch":{"xref_id":"0013255"}}}


id: MONDO:0032705
data:
  {"annotated_genes":["SJAG_01616"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88084],"is_not":false,"summary":null,"term":"MONDO:0032705"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of folate metabolism and transport","termid":"MONDO:0017313"},{"relation_name":"is_a","term_name":"leukodystrophy","termid":"MONDO:0019046"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01616":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0700092","MONDO:0005066"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, epilepsy, and hypomyelination","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1684142","OMIM:618367","GARD:18018","Orphanet:597874","UMLS:C5193057"],"synonyms":[{"name":"5,10-methenyltetrahydrofolate synthetase deficiency","type":"exact"},{"name":"MTHFS-related developmental delay-microcephaly-short stature-epilepsy syndrome","type":"exact"},{"name":"NEDMEHM","type":"exact"},{"name":"NEURODEVELOPMENTAL DISORDER WITH MICROCEPHALY, EPILEPSY, AND HYPOMYELINATION","type":"exact"}],"termid":"MONDO:0032705","terms_by_termid":{"MONDO:0032705":null},"xrefs":{"Monarch":{"xref_id":"0032705"}}}


id: MONDO:0000416
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete variable age at onset electroclinical syndrome (obsolete MONDO:0000416)","termid":"MONDO:0000416","xrefs":{"Monarch":{"xref_id":"0000416"}}}


id: GO:0044059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The alteration by a symbiont organism of the functioning of a endocrine process, any of the hormonal, neural, and secretory processes that release products into the blood or lymph, in the host organism.","definition_xrefs":["MITRE:tk"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of host endocrine process (obsolete GO:0044059)","synonyms":[{"name":"regulation by symbiont of host endocrine process","type":"exact"}],"termid":"GO:0044059"}


id: PBO:0068090
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 396","termid":"PBO:0068090"}


id: GO:0006863
data:
  {"annotated_genes":["SJAG_04717","SJAG_00760","SJAG_03777"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114602],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098702"},{"annotations":[114603],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098710"},{"annotations":[117210],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140140"},{"annotations":[81879],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042906"}]},"cv_name":"biological_process","definition":"The directed movement of purine bases, one of the two classes of nitrogen-containing ring compounds found in DNA and RNA, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleobase transport","termid":"GO:0015851"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00760":null,"SJAG_03777":null,"SJAG_04717":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"purine nucleobase transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0015852"],"synonyms":[{"name":"purine base transmembrane transport","type":"exact"},{"name":"purine base transport","type":"exact"},{"name":"purine transmembrane transport","type":"related"},{"name":"purine transport","type":"related"}],"termid":"GO:0006863","terms_by_termid":{"GO:0042906":null,"GO:0098702":null,"GO:0098710":null,"GO:0140140":null}}


id: PBO:0116598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IFNG regulatory antisense RNA 1","termid":"PBO:0116598"}


id: GO:0072761
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a capsazepine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to capsazepine","termid":"GO:1901594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to capsazepine","termid":"GO:0072761"}


id: GO:1902527
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein monoubiquitination.","definition_xrefs":["PMID:21931591","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein ubiquitination","termid":"GO:0031398"},{"relation_name":"is_a","term_name":"regulation of protein monoubiquitination","termid":"GO:1902525"},{"relation_name":"positively_regulates","term_name":"protein monoubiquitination","termid":"GO:0006513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein monoubiquitination","synonyms":[{"name":"activation of protein monoubiquitination","type":"narrow"},{"name":"activation of protein monoubiquitinylation","type":"narrow"},{"name":"activation of protein monoubiquitylation","type":"narrow"},{"name":"positive regulation of protein monoubiquitinylation","type":"exact"},{"name":"positive regulation of protein monoubiquitylation","type":"exact"},{"name":"up regulation of protein monoubiquitination","type":"exact"},{"name":"up regulation of protein monoubiquitinylation","type":"exact"},{"name":"up regulation of protein monoubiquitylation","type":"exact"},{"name":"up-regulation of protein monoubiquitination","type":"exact"},{"name":"up-regulation of protein monoubiquitinylation","type":"exact"},{"name":"up-regulation of protein monoubiquitylation","type":"exact"},{"name":"upregulation of protein monoubiquitination","type":"exact"},{"name":"upregulation of protein monoubiquitinylation","type":"exact"},{"name":"upregulation of protein monoubiquitylation","type":"exact"}],"termid":"GO:1902527"}


id: GO:0047578
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-L-glutamate + 2-oxoglutarate = 4-hydroxy-2-oxoglutarate + L-glutamate.","definition_xrefs":["EC:2.6.1.23","MetaCyc:4-HYDROXYGLUTAMATE-AMINOTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016769"],"is_obsolete":false,"name":"4-hydroxyglutamate transaminase activity","secondary_identifiers":["Reactome:R-HSA-6784393","RHEA:10480"],"synonyms":[{"name":"4-hydroxy-L-glutamate:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"4-hydroxyglutamate aminotransferase activity","type":"exact"}],"termid":"GO:0047578"}


id: PBO:0087136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, subunit of Nrd1 complex (Nrd1p-Nab3p-Sen1p); complex interacts with exosome to mediate 3'-end formation of some mRNAs, snRNAs, snoRNAs, and CUTs; required for termination of non-poly(A) transcripts and efficient splicing; Nrd1-Nab3 pathway appears to have a role in rapid suppression of some genes when cells are shifted to poor growth conditions, indicating role for Nrd1-Nab3 in regulating cellular response to nutrient availability","termid":"PBO:0087136"}


id: GO:0051208
data:
  {"annotated_genes":["SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110705],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0061454"}]},"cv_name":"biological_process","definition":"The process of binding or confining calcium ions such that they are separated from other components of a biological system.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maintenance of location in cell","termid":"GO:0051651"},{"relation_name":"part_of","term_name":"intracellular calcium ion homeostasis","termid":"GO:0006874"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03850":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"part_of","termid":"GO:0098771"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0098771"],"is_obsolete":false,"name":"sequestering of calcium ion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"calcium ion (Ca2+) retention","type":"exact"},{"name":"calcium ion (Ca2+) sequestering","type":"exact"},{"name":"calcium ion (Ca2+) sequestration","type":"exact"},{"name":"calcium ion (Ca2+) storage","type":"exact"},{"name":"calcium ion storage activity","type":"related"},{"name":"negative regulation of calcium ion (Ca2+) transport","type":"related"},{"name":"retention of calcium ion (Ca2+)","type":"exact"},{"name":"sequestering of calcium ion (Ca2+)","type":"exact"},{"name":"sequestration of calcium ion (Ca2+)","type":"exact"},{"name":"storage of calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0051208","terms_by_termid":{"GO:0061454":null}}


id: MONDO:0850093
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. An electroclinical syndrome characterized by the occurrence of generalized onset seizures that cause lapses in awareness, begin and end abruptly, typically last only a few seconds and are associated with abnormal spike-wave discharges as seen by electroencephalogram.","definition_xrefs":["DOID:0070309"],"gene_count":0,"genotype_count":0,"name":"obsolete absence epilepsy (obsolete MONDO:0850093)","termid":"MONDO:0850093","xrefs":{"Monarch":{"xref_id":"0850093"}}}


id: MONDO:0013565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi anemia caused by mutations of the FANCG gene.","definition_xrefs":["NCIT:C125708"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0002280","MONDO:0005066","MONDO:0021190"],"is_obsolete":false,"name":"Fanconi anemia complementation group G","secondary_identifiers":["GARD:15753","UMLS:C3469527","MEDGEN:854017","OMIM:614082","DOID:0111086"],"synonyms":[{"name":"FANCG","type":"exact"},{"name":"Fanconi Anemia, complementation group type G","type":"exact"},{"name":"Fanconi anaemia complementation group type G","type":"exact"},{"name":"Fanconi anemia complementation group G","type":"exact"},{"name":"Fanconi anemia complementation group type G","type":"exact"},{"name":"Fanconi anemia, complementation group G","type":"related"}],"termid":"MONDO:0013565","xrefs":{"Monarch":{"xref_id":"0013565"}}}


id: PBO:0082629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of CORVET membrane tethering complex; vacuolar peripheral membrane protein that promotes vesicular docking/fusion reactions in conjunction with SNARE proteins, required for vacuolar biogenesis","termid":"PBO:0082629"}


id: FYPO:0009110
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which cell population growth is normal after short incubation in hydroxyurea.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002057","FYPO:0002060","FYPO:0002058","FYPO:0000003","FYPO:0000257"],"is_obsolete":false,"name":"normal vegetative cell population growth after short incubation in hydroxyurea","secondary_identifiers":["PMID:37200372"],"synonyms":[{"name":"normal vegetative cell population growth after acute hydroxyurea treatment","type":"exact"}],"termid":"FYPO:0009110"}


id: GO:0140429
data:
  {"annotated_genes":["SJAG_04140","SJAG_01837","SJAG_03048","SJAG_01805","SJAG_00082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92010,95817,104398,113256,118740],"is_not":false,"summary":null,"term":"GO:0140429"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of mitotic sister chromatid biorientation, the mitotic cell cycle process in which sister chromatids establish stable, end-on attachments to the plus ends of microtubules emanating from opposite spindle poles, oriented such that separation can proceed.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:vw","PMID:20739936","PMID:21306900","PMID:15525536"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to mitotic cell cycle spindle assembly checkpoint signaling","termid":"GO:0072479"},{"relation_name":"is_a","term_name":"repair of mitotic kinetochore microtubule attachment defect","termid":"GO:0140273"},{"relation_name":"is_a","term_name":"positive regulation of attachment of mitotic spindle microtubules to kinetochore","termid":"GO:1902425"},{"relation_name":"positively_regulates","term_name":"mitotic sister chromatid biorientation","termid":"GO:1990758"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_03048":null,"SJAG_04140":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000070"}],"interesting_parent_ids":["GO:0007049","GO:0000070","GO:0008150"],"is_obsolete":false,"name":"positive regulation of mitotic sister chromatid biorientation","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1990598","GO:0098783"],"synonyms":[{"name":"correction of merotelic kinetochore attachment, mitotic","type":"narrow"},{"name":"correction of mono-orientation defects","type":"narrow"},{"name":"correction of syntelic kinetochore attachment, mitotic","type":"narrow"},{"name":"repair of mitotic merotelic kinetochore attachment defect","type":"narrow"},{"name":"repair of mitotic merotelic kinetochore attachment defects","type":"narrow"},{"name":"repair of mitotic mono-orientation defect","type":"narrow"},{"name":"repair of mitotic mono-orientation defects","type":"narrow"}],"termid":"GO:0140429","terms_by_termid":{"GO:0140429":null}}


id: PBO:0040512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVPR1B divergent transcript","termid":"PBO:0040512"}


id: GO:0102002
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-valine + 2 O2 + 2 NADPH(4-) + 2 H+ = (E)-2-methylpropanal oxime + 2 NADP(3-) + carbon dioxide + 3 H2O.","definition_xrefs":["EC:1.14.14.38"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"valine N-monooxygenase (oxime forming) activity","secondary_identifiers":["MetaCyc:1.14.13.118-RXN","RHEA:28606"],"termid":"GO:0102002"}


id: GO:0046034
data:
  {"annotated_genes":["SJAG_00027","SJAG_02369","SJAG_02107","SJAG_00461","SJAG_03925","SJAG_02135","SJAG_MIT09","SJAG_00605","SJAG_04192","SJAG_00542","SJAG_01310","SJAG_04048","SJAG_02796","SJAG_01471","SJAG_00839","SJAG_06621","SJAG_04422","SJAG_00438","SJAG_00985","SJAG_05204","SJAG_07003","SJAG_02564","SJAG_03828","SJAG_00915","SJAG_04495","SJAG_03114","SJAG_02945","SJAG_02038","SJAG_02009","SJAG_05314","SJAG_02105","SJAG_MIT15","SJAG_03903","SJAG_MIT37","SJAG_00136","SJAG_04334","SJAG_02598","SJAG_00836","SJAG_04122","SJAG_03373","SJAG_03660","SJAG_06622","SJAG_00685","SJAG_02785","SJAG_00133"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[60068,69112,69192],"is_not":false,"summary":null,"term":"GO:0046034"},{"annotations":[74386,105398,105655,111436,111440,100004,111438,79788,107850,107481,100275,96536,107480,118409,111437,111439,111442,111441,107849,107479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[90617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[75038,78092],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[120071],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[117906,95289,105693,121152,105053,107040,95880,109845,94863,96859,105667,121146,91138,109937,103837,110828,121158],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[71970],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving ATP, adenosine triphosphate, a universally important coenzyme and enzyme regulator.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine ribonucleotide metabolic process","termid":"GO:0009150"},{"relation_name":"is_a","term_name":"purine ribonucleoside triphosphate metabolic process","termid":"GO:0009205"}],"gene_count":45,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00133":null,"SJAG_00136":null,"SJAG_00438":null,"SJAG_00461":null,"SJAG_00542":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00836":null,"SJAG_00839":null,"SJAG_00915":null,"SJAG_00985":null,"SJAG_01310":null,"SJAG_01471":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02105":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02564":null,"SJAG_02598":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03114":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03925":null,"SJAG_04048":null,"SJAG_04122":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04422":null,"SJAG_04495":null,"SJAG_05204":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null,"SJAG_07003":null,"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"ATP metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"synonyms":[{"name":"ATP metabolism","type":"exact"}],"termid":"GO:0046034","terms_by_termid":{"GO:0006110":null,"GO:0042776":null,"GO:0045820":null,"GO:0046034":null,"GO:0061613":null,"GO:0061621":null,"GO:1905707":null}}


id: PBO:0039136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autoimmune regulator","termid":"PBO:0039136"}


id: PBO:0058972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malectin","termid":"PBO:0058972"}


id: MONDO:0018361
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary neonatal autoimmune disease","termid":"MONDO:0018356"},{"relation_name":"is_a","term_name":"scleroderma","termid":"MONDO:0019340"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"neonatal scleroderma","secondary_identifiers":["UMLS:C4509425","GARD:21648","Orphanet:398127","MEDGEN:1652107"],"termid":"MONDO:0018361","xrefs":{"Monarch":{"xref_id":"0018361"}}}


id: PBO:0016117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein Ssa2","termid":"PBO:0016117"}


id: MONDO:0010602
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The most common form of hemophilia characterized by spontaneous or prolonged hemorrhages due to factor VIII deficiency.","definition_xrefs":["Orphanet:98878"],"direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked disease","termid":"MONDO:0000425"},{"relation_name":"is_a","term_name":"hemorrhagic disease","termid":"MONDO:0002243"},{"relation_name":"is_a","term_name":"hemophilia","termid":"MONDO:0018660"},{"relation_name":"is_a","term_name":"inherited blood coagulation disorder","termid":"MONDO:0021181"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"hemophilia A","secondary_identifiers":["NCIT:C27146","OMIM:306700","DOID:12134","MedDRA:10016080","SCTID:234440005","UMLS:C0019069","icd11.foundation:337607970","MESH:D006467","MEDGEN:5501","ICD9:286.0","OMIM:134500","GARD:6591","ICD10CM:D66","NORD:1221","NANDO:2200676"],"synonyms":[{"name":"HEMA","type":"related"},{"name":"Haemophilia A","type":"related"},{"name":"Subhemophilia","type":"exact"},{"name":"autosomal haemophilia a","type":"related"},{"name":"autosomal hemophilia a","type":"related"},{"name":"classic haemophilia","type":"related"},{"name":"classic hemophilia","type":"related"},{"name":"classical haemophilia","type":"related"},{"name":"classical hemophilia","type":"related"},{"name":"congenital factor VIII disorder","type":"exact"},{"name":"factor 8 deficiency","type":"related"},{"name":"factor VIII deficiency","type":"exact"},{"name":"haemophilia A, congenital","type":"related"},{"name":"haemophilia a, X-linked recessive","type":"exact"},{"name":"haemophilia type A","type":"exact"},{"name":"haemophilia type a","type":"exact"},{"name":"hem A","type":"related"},{"name":"hemophilia A","type":"exact"},{"name":"hemophilia A, congenital","type":"related"},{"name":"hemophilia a, X-linked recessive","type":"exact"},{"name":"hemophilia type A","type":"exact"},{"name":"hemophilia type a","type":"exact"},{"name":"hemophilia, classic","type":"related"},{"name":"hereditary Factor VIII deficiency","type":"exact"},{"name":"hereditary Factor VIII deficiency disease","type":"exact"}],"termid":"MONDO:0010602","xrefs":{"Monarch":{"xref_id":"0010602"}}}


id: GO:1901236
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of 4-(trimethylammonio)butanoate from one side of a membrane to the other.","definition_xrefs":["GOC:TermGenie","PMID:16952940","PMID:21784948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"quaternary ammonium group transmembrane transporter activity","termid":"GO:0015651"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"4-(trimethylammonio)butanoate transmembrane transporter activity","termid":"GO:1901236"}


id: GO:0004161
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: dimethylallyl diphosphate + isopentenyl diphosphate = (2E)-geranyl diphosphate + diphosphate.","definition_xrefs":["RHEA:22408"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyl diphosphate synthase activity","termid":"GO:0120531"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016765","GO:0016740"],"is_obsolete":false,"name":"dimethylallyltranstransferase activity","secondary_identifiers":["EC:2.5.1.1","Reactome:R-HSA-9717834","MetaCyc:GPPSYN-RXN","Reactome:R-HSA-191322"],"synonyms":[{"name":"(2E,6E)-farnesyl diphosphate synthetase activity","type":"related"},{"name":"DMAPP:IPP-dimethylallyltransferase activity","type":"related"},{"name":"dimethylallyl-diphosphate:isopentenyl-diphosphate dimethylallyltranstransferase activity","type":"related"},{"name":"dimethylallyltransferase activity","type":"exact"},{"name":"diprenyltransferase activity","type":"related"},{"name":"geranyl diphosphate synthase activity","type":"exact"},{"name":"geranyl pyrophosphate synthase activity","type":"related"},{"name":"geranyl pyrophosphate synthetase activity","type":"related"},{"name":"geranyl-diphosphate synthase activity","type":"related"},{"name":"trans-farnesyl pyrophosphate synthetase activity","type":"related"}],"termid":"GO:0004161"}


id: MOD:01616
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links two L-cysteine residues and adds three sulfur atoms to form trithiocystine.","definition_xrefs":["PubMed:19438211","RESID:AA0513"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysulfide crosslinked residues","termid":"MOD:01620"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"trithiocystine","synonyms":[{"name":"(2R,2'R)-3,3'-pentasulfane-1,5-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-pentathiobisalanine","type":"exact"},{"name":"bis(2-amino-2-carboxyethyl)pentasulfide","type":"exact"},{"name":"trithiocystine","type":"exact"}],"termid":"MOD:01616"}


id: PBO:0040002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 14","termid":"PBO:0040002"}


id: PBO:0027485
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_decreased_numbers_during_G0","termid":"PBO:0027485"}


id: PBO:0074452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"smoothened, frizzled class receptor","termid":"PBO:0074452"}


id: MONDO:0800423
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"colorectal cancer, susceptibility to, 4","secondary_identifiers":["MEDGEN:394248","UMLS:C2677290"],"synonyms":[{"name":"CRCS4","type":"exact"}],"termid":"MONDO:0800423","xrefs":{"Monarch":{"xref_id":"0800423"}}}


id: PBO:0076498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 1 receptor member 1","termid":"PBO:0076498"}


id: PBO:0087753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the trimeric GatFAB AmidoTransferase(AdT) complex; involved in the formation of Q-tRNAQ; mutation is functionally complemented by the bacterial GatB ortholog","termid":"PBO:0087753"}


id: PBO:0090704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator complex subunit Elp6","termid":"PBO:0090704"}


id: PBO:0081923
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 892","termid":"PBO:0081923"}


id: PBO:0116773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trafficking regulator of GLUT4 (SLC2A4) 1 (gene/pseudogene)","termid":"PBO:0116773"}


id: PBO:0040428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit e2","termid":"PBO:0040428"}


id: PBO:0083487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene VPS64/YDR200C; computationally predicted to have thiol-disulfide oxidoreductase activity","termid":"PBO:0083487"}


id: PBO:0084719
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial inner membrane protein; associates with respiratory chain supercomplexes III (ubiquinol-cytochrome c reductase) and IV (cytochrome c oxidase); identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0084719"}


id: MONDO:0004753
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"strabismus","termid":"MONDO:0003432"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mechanical strabismus","secondary_identifiers":["ICD9:378.60","ICD10CM:H50.6","SCTID:5371001","DOID:9306","icd11.foundation:230827382","UMLS:C0152223","ICD9:378.6","MEDGEN:101828"],"termid":"MONDO:0004753","xrefs":{"Monarch":{"xref_id":"0004753"}}}


id: MONDO:0005581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Malignant lymphoma of the bursa of Fabricius, induced by avian leukosis virus occurring in birds.","definition_xrefs":["EFO:0005923"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"lymphoma, non-human animal","termid":"MONDO:0700102"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AVL induced bursal lymphoma","termid":"MONDO:0005581","xrefs":{"Monarch":{"xref_id":"0005581"}}}


id: PBO:0060367
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myogenesis regulating glycosidase (putative)","termid":"PBO:0060367"}


id: GO:2000873
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H4 acetylation involved in response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000873)","synonyms":[{"name":"regulation of histone H4 acetylation involved in DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular DNA damage response","type":"exact"},{"name":"regulation of histone H4 acetylation involved in cellular response to DNA damage stimulus","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to DNA damage","type":"exact"},{"name":"regulation of histone H4 acetylation involved in response to genotoxic stress","type":"exact"}],"termid":"GO:2000873"}


id: PBO:0029685
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_RNA_level_during_cellular_response_to_iron_ion_starvation","termid":"PBO:0029685"}


id: PBO:0089945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"actin-like protein","termid":"PBO:0089945"}


id: FYPO:0002900
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle checkpoint phenotype in which any mitotic DNA damage checkpoint is abnormal when the cell is exposed to ultraviolet light. A DNA damage checkpoint normally regulates progression through the cell cycle in response to DNA damage.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic DNA damage checkpoint","termid":"FYPO:0000006"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation during cellular response to UV","termid":"FYPO:0004254"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000298","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic DNA damage checkpoint during cellular response to UV","synonyms":[{"name":"abnormal DNA damage checkpoint during cellular response to UV during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint activation during cellular response to UV","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint during cellular response to UV during vegetative growth","type":"exact"},{"name":"abnormal mitotic DNA damage checkpoint during cellular response to ultraviolet light","type":"exact"}],"termid":"FYPO:0002900"}


id: PBO:0034472
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-premature_mitotic_spindle_elongation","termid":"PBO:0034472"}


id: GO:0047983
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: beta-alanine + L-gamma-glutamyl-L-cysteine + ATP = gamma-L-glutamyl-L-cysteinyl-beta-alanine + ADP + 2 H+ + phosphate.","definition_xrefs":["RHEA:17993","EC:6.3.2.23"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"homoglutathione synthase activity","secondary_identifiers":["MetaCyc:HOMOGLUTATHIONE-SYNTHASE-RXN","KEGG_REACTION:R02741"],"synonyms":[{"name":"beta-alanine specific hGSH synthetase activity","type":"related"},{"name":"gamma-L-glutamyl-L-cysteine:beta-alanine ligase (ADP-forming)","type":"related"},{"name":"homoglutathione synthetase activity","type":"related"}],"termid":"GO:0047983"}


id: PBO:0056462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MBL associated serine protease 2","termid":"PBO:0056462"}


id: GO:0103072
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: a (R)-2-hydroxy even numbered straight chain 2,3,4-saturated fatty acyl CoA = formyl-CoA + an odd numbered straight chain 2,3,4-saturated fatty aldehyde.","definition_xrefs":["GOC:pz","MetaCyc:RXN66-475"],"gene_count":0,"genotype_count":0,"name":"obsolete straight chain (R)-2-hydroxy fatty acyl-CoA lyase activity (obsolete GO:0103072)","termid":"GO:0103072"}


id: PBO:0052157
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNJ5 antisense RNA 1","termid":"PBO:0052157"}


id: PBO:0115011
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial intermembrane space protein, unknown biological role Cmc4","termid":"PBO:0115011"}


id: GO:0008317
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a gurken growth factor receptor.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete gurken receptor binding (obsolete GO:0008317)","synonyms":[{"name":"gurken receptor ligand","type":"narrow"}],"termid":"GO:0008317"}


id: PBO:0078418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 1-4","termid":"PBO:0078418"}


id: PBO:0087022
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L10; homologous to mammalian ribosomal protein L10 and bacterial L16; responsible for joining the 40S and 60S subunits; regulates translation initiation; similar to members of the QM gene family; protein abundance increases under DNA replication stress; mutations in human homolog implicated in T-cell acute lymphoblastic leukemia and also autism spectrum disorders (ASD); human RPL10 can complement yeast null mutant","termid":"PBO:0087022"}


id: PBO:0045886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1E1-BLOC1S5 readthrough (NMD candidate)","termid":"PBO:0045886"}


id: MONDO:1011431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Gaucher disease that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gaucher disease, non-human animal","secondary_identifiers":["OMIA:000405"],"termid":"MONDO:1011431","xrefs":{"Monarch":{"xref_id":"1011431"}}}


id: MONDO:0850419
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A diffuse large B-cell lymphoma that is characterized by the expression of CD10, BCL-6, A-myb, and LMO2 genes, BCL-2 translocation, and c-REL amplification.","definition_xrefs":["DOID:0080997"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diffuse large B-cell lymphoma","termid":"MONDO:0018905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"diffuse large B-cell lymphoma germinal center B-cell type","secondary_identifiers":["NCIT:C36080","UMLS:C1333295","MEDGEN:234202"],"termid":"MONDO:0850419","xrefs":{"Monarch":{"xref_id":"0850419"}}}


id: GO:0007476
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the imaginal disc-derived wing are generated and organized. The wing is an appendage modified for flying.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"imaginal disc-derived appendage morphogenesis","termid":"GO:0035114"},{"relation_name":"is_a","term_name":"post-embryonic appendage morphogenesis","termid":"GO:0035120"},{"relation_name":"part_of","term_name":"wing disc morphogenesis","termid":"GO:0007472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"imaginal disc-derived wing morphogenesis","synonyms":[{"name":"wing morphogenesis","type":"exact"}],"termid":"GO:0007476"}


id: MONDO:0028743
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dysostosis with brachydactyly with extraskeletal manifestations (obsolete MONDO:0028743)","termid":"MONDO:0028743","xrefs":{"Monarch":{"xref_id":"0028743"}}}


id: PBO:0121159
data:
  {"annotated_genes":["SJAG_MIT37","SJAG_MIT15","SJAG_MIT09"],"annotation_feature_type":"gene","cv_annotations":{"EC numbers":[{"annotations":[56607,56615,56639],"is_not":false,"summary":null,"term":"PBO:0121159"}]},"cv_name":"EC numbers","gene_count":3,"genes_by_uniquename":{"SJAG_MIT09":null,"SJAG_MIT15":null,"SJAG_MIT37":null},"genotype_count":0,"is_obsolete":false,"name":"3.6.1.34","termid":"PBO:0121159","terms_by_termid":{"PBO:0121159":null}}


id: GO:0043548
data:
  {"annotated_genes":["SJAG_01876"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78719],"is_not":false,"summary":null,"term":"GO:0043548"}]},"cv_name":"molecular_function","definition":"Binding to a phosphatidylinositol 3-kinase, any enzyme that catalyzes the addition of a phosphate group to an inositol lipid at the 3' position of the inositol ring.","definition_xrefs":["PMID:9255069","PMID:10209156"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01876":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase binding","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"PI3K binding","type":"exact"},{"name":"phosphoinositide 3-kinase binding","type":"exact"}],"termid":"GO:0043548","terms_by_termid":{"GO:0043548":null}}


id: PBO:0044235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cullin 4A pseudogene 1","termid":"PBO:0044235"}


id: FYPO:0006886
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured at or associated with the mitotic spindle is greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"},{"relation_name":"is_a","term_name":"increased protein level during vegetative growth","termid":"FYPO:0001327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0000120"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000120","FYPO:0005447","FYPO:0001985","FYPO:0000054","FYPO:0000002","FYPO:0006551","FYPO:0002399"],"is_obsolete":false,"name":"increased protein level at mitotic spindle","synonyms":[{"name":"increased protein level at mitotic spindle during mitotic cell cycle","type":"related"},{"name":"increased protein level at mitotic spindle during vegetative growth","type":"exact"},{"name":"increased protein level in mitotic spindle","type":"exact"},{"name":"protein accumulation at mitotic spindle","type":"exact"}],"termid":"FYPO:0006886"}


id: PBO:0005295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase homolog Aah3","termid":"PBO:0005295"}


id: MONDO:1010117
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The sudden unexpected death of a person age 1 to 18 years that remains unexplained after a thorough case investigation, including performance of a complete autopsy with ancillary testing, and review of the clinical history and circumstances of death.","definition_xrefs":["PMID:31502215"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sudden unexpected death in pediatrics","termid":"MONDO:1010120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sudden unexplained death in childhood","secondary_identifiers":["MEDGEN:820021","UMLS:C3827273"],"termid":"MONDO:1010117","xrefs":{"Monarch":{"xref_id":"1010117"}}}


id: FYPO:0000086
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to tacrolimus. Cells stop growing (and may die) at a concentration of tacrolimus that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0005447","FYPO:0000003","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to tacrolimus","synonyms":[{"name":"hypersensitive to tacrolimus","type":"exact"},{"name":"sensitive to FK506","type":"exact"},{"name":"sensitive to tacrolimus during mitotic cell cycle","type":"related"},{"name":"sensitive to tacrolimus during vegetative growth","type":"exact"}],"termid":"FYPO:0000086"}


id: PBO:0051634
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inner mitochondrial membrane peptidase subunit 2","termid":"PBO:0051634"}


id: PBO:0001517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C (PKC)-like Pck1","termid":"PBO:0001517"}


id: PBO:0055883
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 8 VRAC subunit A","termid":"PBO:0055883"}


id: PBO:0013442
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly protein Cox1101/ mitochondrial ribosomal protein Rsm22 fusion protein","termid":"PBO:0013442"}


id: MONDO:0054850
data:
  {"annotated_genes":["SJAG_04148"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88378],"is_not":false,"summary":null,"term":"MONDO:0054850"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46 XX gonadal dysgenesis","termid":"MONDO:0009299"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04148":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"ovarian dysgenesis 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:618078","UMLS:C4748084","GARD:18042","DOID:0080498","MEDGEN:1648307"],"synonyms":[{"name":"ODG6","type":"related"},{"name":"ovarian dysgenesis 6","type":"exact"}],"termid":"MONDO:0054850","terms_by_termid":{"MONDO:0054850":null},"xrefs":{"Monarch":{"xref_id":"0054850"}}}


id: PBO:0007918
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved ATP binding protein, implicated in sister chromatid cohesion","termid":"PBO:0007918"}


id: PBO:0082268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ammonium permease involved in regulation of pseudohyphal growth; belongs to Mep-Amt-Rh family of well-conserved ammonium (NH4+) transporters that includes human Rh factors; expression is under the nitrogen catabolite repression regulation; activity is controlled by phospho-silencing; phosphorylation of Mep2 mediated by Npr1; dephosphorylation involves Psr1p and Psr2p","termid":"PBO:0082268"}


id: MONDO:0016303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dextro-looped transposition of the great arteries","termid":"MONDO:0019443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"congenitally uncorrected transposition of the great arteries with cardiac malformation","secondary_identifiers":["GARD:20503","Orphanet:216729","UMLS:C5679811","MEDGEN:1843053","NANDO:1200701"],"synonyms":[{"name":"TGA with cardiac malformation","type":"exact"},{"name":"congenitally uncorrected transposition of the great vessels with cardiac malformation","type":"exact"}],"termid":"MONDO:0016303","xrefs":{"Monarch":{"xref_id":"0016303"}}}


id: PBO:0085420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Plasma membrane transporter of the major facilitator superfamily; member of the 12-spanner drug:H(+) antiporter DHA1 family; involved in efflux of fluconazole, diazaborine, benomyl, methotrexate, and other drugs; expression induced in cells treated with the mycotoxin patulin; relocalizes from nucleus to plasma membrane upon DNA replication stress","termid":"PBO:0085420"}


id: PBO:0055724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lamin tail domain containing 1","termid":"PBO:0055724"}


id: MONDO:1012006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"alloimmune hemolytic anemia of the newborn, non-human animal","termid":"MONDO:1011684"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alloimmune hemolytic anemia of the newborn, domestic cat","secondary_identifiers":["OMIA:000028-9685"],"termid":"MONDO:1012006","xrefs":{"Monarch":{"xref_id":"1012006"}}}


id: CHEBI:338412
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anisomycin","termid":"CHEBI:338412"}


id: PBO:0055708
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lectin, mannose binding 2 like","termid":"PBO:0055708"}


id: GO:0051477
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a mannosylglycerate from one side of a membrane to the other.","definition_xrefs":["PMID:15034926","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transporter activity","termid":"GO:0046943"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mannosylglycerate transmembrane transporter activity","termid":"GO:0051477"}


id: MONDO:0009945
data:
  {"annotated_genes":["SJAG_05230"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89026],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0015005"}]},"cv_name":"mondo","definition":"A rare neurometabolic disease characterized by recurrent intractable seizures in the prenatal, neonatal and postnatal period that are resistant to anti-epileptic drugs (AEDs) but that are responsive to pharmacological dosages of pyridoxine (vitamin B6).","definition_xrefs":["Orphanet:3006"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inborn disorder of pyridoxine metabolism","termid":"MONDO:0019237"},{"relation_name":"is_a","term_name":"metabolic epilepsy","termid":"MONDO:0100033"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027","MONDO:0005066"],"is_obsolete":false,"name":"pyridoxine-dependent epilepsy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:734434007","NORD:1639","MEDGEN:340341","DOID:0080768","GARD:9298","UMLS:C1849508","MESH:C536254"],"synonyms":[{"name":"AASA dehydrogenase deficiency","type":"related"},{"name":"EPD","type":"related"},{"name":"Epd","type":"related"},{"name":"antiquitin deficiency","type":"exact"},{"name":"epilepsy, pyridoxine-dependent","type":"related"},{"name":"pyridoxine dependency","type":"related"},{"name":"pyridoxine dependency with seizures","type":"related"},{"name":"pyridoxine-dependent epilepsy","type":"exact"},{"name":"vitamin B6-dependent seizures","type":"exact"}],"termid":"MONDO:0009945","terms_by_termid":{"MONDO:0015005":null},"xrefs":{"Monarch":{"xref_id":"0009945"}}}


id: GO:1990900
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A constriction site at the junction of the plasma, flagellar and flagellar pocket membranes where the flagellum emerges from the cell body. Observed in some unicellular eukaryotic species such as Chlamydomonas, Giardia and Trypanosoma.","definition_xrefs":["PMID:19806154","PMID:18462016","GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ciliary pocket","termid":"GO:0020016"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ciliary pocket collar","synonyms":[{"name":"FPC","type":"related"},{"name":"cilium pocket collar","type":"exact"},{"name":"flagellar collar","type":"related"},{"name":"flagellar pocket collar","type":"exact"},{"name":"flagellar pore","type":"related"},{"name":"flagellum pocket collar","type":"exact"}],"termid":"GO:1990900"}


id: MONDO:1012186
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nephropathy, non-human animal","termid":"MONDO:1011907"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephropathy, dog","secondary_identifiers":["OMIA:000710-9615"],"termid":"MONDO:1012186","xrefs":{"Monarch":{"xref_id":"1012186"}}}


id: RO:0002348
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"p 'results in commitment to' c if and only if p is a developmental process and c is a cell and p results in the state of c changing such that is can only develop into a single cell type.","direct_ancestors":[{"relation_name":"is_a","term_name":"results_in_developmental_progression_of","termid":"_global:results_in_developmental_progression_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"results_in_commitment_to","termid":"RO:0002348"}


id: GO:0006832
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete small molecule transport (obsolete GO:0006832)","synonyms":[{"name":"small molecule transport","type":"exact"}],"termid":"GO:0006832"}


id: MONDO:0013729
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pregnancy loss, recurrent, susceptibility in which the cause of the disease is a mutation in the ANXA5 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility to, 3","secondary_identifiers":["MEDGEN:482304","OMIM:614391","UMLS:C3280674"],"synonyms":[{"name":"ANXA5 pregnancy loss, recurrent, susceptibility","type":"exact"},{"name":"RPRGL3","type":"related"},{"name":"pregnancy loss, recurrent, susceptibility caused by mutation in ANXA5","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, 3","type":"exact"},{"name":"pregnancy loss, recurrent, susceptibility to, type 3","type":"exact"}],"termid":"MONDO:0013729","xrefs":{"Monarch":{"xref_id":"0013729"}}}


id: GO:0039625
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner layer of a double or triple concentric icosahedral capsid. Inner capsids are part of reoviridae and cystoviridae virions.","definition_xrefs":["UniProtKB-KW:KW-1153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"viral inner capsid","synonyms":[{"name":"inner capsid","type":"exact"}],"termid":"GO:0039625"}


id: GO:0008809
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-carnitine = L-carnitine.","definition_xrefs":["MetaCyc:CARNRACE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"racemase and epimerase activity, acting on hydroxy acids and derivatives","termid":"GO:0016856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"carnitine racemase activity","termid":"GO:0008809"}


id: PBO:0073550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHANK2 antisense RNA 2","termid":"PBO:0073550"}


id: PBO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BSD domain protein, unknown biological role","termid":"PBO:0000822"}


id: PBO:0046250
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ELOVL fatty acid elongase 6","termid":"PBO:0046250"}


id: PBO:0029742
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-spherical_cell","termid":"PBO:0029742"}


id: GO:0052875
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced riboflavin + NAD(P)+ = riboflavin + NAD(P)H + 2 H+. This reaction can utilize NADH and NADPH.","definition_xrefs":["EC:1.5.1.41"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"riboflavin reductase [NAD(P)H] activity","secondary_identifiers":["KEGG_REACTION:R09750","MetaCyc:RXN-12445"],"synonyms":[{"name":"NAD(P)H-FMN reductase activity","type":"related"},{"name":"NAD(P)H-dependent FMN reductase activity","type":"related"},{"name":"NAD(P)H2 dehydrogenase (FMN) activity","type":"related"},{"name":"NAD(P)H2:FMN oxidoreductase activity","type":"related"},{"name":"NAD(P)H:FMN oxidoreductase activity","type":"related"},{"name":"NAD(P)H:riboflavin oxidoreductase activity","type":"related"},{"name":"flavin mononucleotide reductase activity","type":"related"},{"name":"flavine mononucleotide reductase activity","type":"related"},{"name":"riboflavin mononucleotide (reduced nicotinamide adenine dinucleotide) reductase activity","type":"related"},{"name":"riboflavin mononucleotide reductase activity","type":"related"},{"name":"riboflavin reductase (NADH) activity","type":"narrow"},{"name":"riboflavin reductase (NADPH) activity","type":"narrow"},{"name":"riboflavine mononucleotide reductase activity","type":"related"}],"termid":"GO:0052875"}


id: MONDO:0024569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant optic atrophy plus syndrome","termid":"MONDO:0014720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0000426","MONDO:0005328"],"is_obsolete":false,"name":"optic atrophy 8","secondary_identifiers":["MEDGEN:898923","DOID:0111439","GARD:16148","OMIM:616648","UMLS:C4085249"],"synonyms":[{"name":"OPA8","type":"exact"},{"name":"optic atrophy 8","type":"exact"}],"termid":"MONDO:0024569","xrefs":{"Monarch":{"xref_id":"0024569"}}}


id: MOD:00765
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue to S-(L-cysteinyl)-L-cysteine, forming a disulfide bond with free cysteine.","definition_xrefs":["RESID:AA0025#CYS1","DeltaMass:260","PubMed:3083866","PubMed:7918467","PubMed:8344916","PubMed:1988019","PubMed:366603","PubMed:2001356","Unimod:312","PubMed:2076469"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"},{"relation_name":"is_a","term_name":"disulfide conjugated residue","termid":"MOD:01862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"cysteinylation (disulfide with free L-cysteine)","synonyms":[{"name":"(2R,2'R)-3,3'-disulfane-1,2-diylbis(2-aminopropanoic acid)","type":"exact"},{"name":"2-amino-3-(2-amino-2-carboxy-ethyl)disulfanyl-propanoic acid","type":"related"},{"name":"3,3'-disulfane-1,2-diylbis(2-azanylpropanoic acid)","type":"exact"},{"name":"3,3'-dithiobis(2-aminopropanoic acid)","type":"exact"},{"name":"3,3'-dithiobisalanine","type":"exact"},{"name":"3,3'-dithiodialanine","type":"exact"},{"name":"Cysteinylation","type":"exact"},{"name":"L-cystine","type":"exact"},{"name":"MOD_RES S-cysteinyl cysteine","type":"exact"},{"name":"S-cystenyl cystenyl","type":"exact"},{"name":"SCysCys","type":"exact"},{"name":"beta,beta'-diamino-beta,beta'-dicarboxydiethyldisulfide","type":"exact"},{"name":"beta,beta'-dithiodialanine","type":"exact"},{"name":"bis(alpha-aminopropionic acid)-beta-disulfide","type":"exact"},{"name":"bis(beta-amino-beta-carboxyethyl)disulfide","type":"exact"},{"name":"dicysteine","type":"exact"}],"termid":"MOD:00765"}


id: PBO:0080677
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WHAMM pseudogene 4","termid":"PBO:0080677"}


id: GO:0047865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N,N-dimethylglycine + electron-transfer flavoprotein + H2O = sarcosine + formaldehyde + reduced electron-transfer flavoprotein.","definition_xrefs":["EC:1.5.8.4","RHEA:52856"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, flavin as acceptor","termid":"GO:0046997"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"dimethylglycine dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R01565","Reactome:R-HSA-6797653","MetaCyc:DIMETHYLGLYCINE-DEHYDROGENASE-RXN"],"synonyms":[{"name":"N,N-dimethylglycine oxidase activity","type":"related"},{"name":"N,N-dimethylglycine:(acceptor) oxidoreductase (demethylating)","type":"related"},{"name":"N,N-dimethylglycine:acceptor oxidoreductase (demethylating)","type":"related"}],"termid":"GO:0047865"}


id: PBO:0119277
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial and cytoplasmic glutaminyl-tRNA ligase Qrs1","termid":"PBO:0119277"}


id: PBO:0088606
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear bridge Ish domain protein Les1","termid":"PBO:0088606"}


id: PBO:0080140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasohibin 2","termid":"PBO:0080140"}


id: PBO:0013107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splicing factor 3B","termid":"PBO:0013107"}


id: PBO:0047632
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fat storage inducing transmembrane protein 1","termid":"PBO:0047632"}


id: PBO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_chromosome_fragmentation_upon_segregation","termid":"PBO:0031091"}


id: MONDO:0100623
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neuro-urological condition characterized by aseptic meningitis, typically without any clear causative agent, associated with acute urinary retention. The typical symptoms and neurological signs of aseptic meningitis are usually mild or absent, so the predominant symptom often turns out to be isolated acute urinary retention. Although several cases are reported in the literature, MRS actual prevalence is underestimated. These factors make an early diagnosis of MRS difficult.","definition_xrefs":["PMID:29801901","PMID:26620904","PMID:36867276"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary system disorder","termid":"MONDO:0002118"},{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meningitis-retention syndrome","synonyms":[{"name":"MRS","type":"exact"}],"termid":"MONDO:0100623","xrefs":{"Monarch":{"xref_id":"0100623"}}}


id: MONDO:0015447
data:
  {"annotated_genes":["SJAG_03453","SJAG_01970","SJAG_04067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89309,89310,87831],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008566"}]},"cv_name":"mondo","definition":"Differentiated thyroid carcinoma (DTC), also known as papillary or follicular thyroid carcinoma, is a slow-growing malignancy usually presenting in adults as an asymptomatic thyroid mass.","definition_xrefs":["Orphanet:146"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01970":null,"SJAG_03453":null,"SJAG_04067":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"differentiated thyroid carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:277876","DOID:0080525","GARD:12027","EFO:1002017","NCIT:C7153","ONCOTREE:WDTC","UMLS:C1337013"],"synonyms":[{"name":"differentiated thyroid cancer","type":"exact"},{"name":"differentiated thyroid carcinoma","type":"exact"},{"name":"differentiated thyroid gland cancer","type":"exact"},{"name":"differentiated thyroid gland carcinoma","type":"exact"},{"name":"papillary or follicular thyroid carcinoma","type":"exact"},{"name":"thyroid gland differentiated carcinoma","type":"exact"},{"name":"thyroid gland well differentiated carcinoma","type":"exact"},{"name":"well differentiated thyroid carcinoma","type":"exact"},{"name":"well differentiated thyroid gland carcinoma","type":"exact"},{"name":"well-differentiated thyroid cancer","type":"exact"},{"name":"well-differentiated thyroid carcinoma","type":"exact"}],"termid":"MONDO:0015447","terms_by_termid":{"MONDO:0008566":null},"xrefs":{"Monarch":{"xref_id":"0015447"}}}


id: PBO:0080654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WEE2 oocyte meiosis inhibiting kinase","termid":"PBO:0080654"}


id: PBO:0029569
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_small_vegetative_cell_population_(obsolete_FYPO:0002152)","termid":"PBO:0029569"}


id: PBO:0044259
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CXADR pseudogene 1","termid":"PBO:0044259"}


id: PBO:0053370
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 293","termid":"PBO:0053370"}


id: MONDO:0013610
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the CLRN1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"retinitis pigmentosa 61","secondary_identifiers":["GARD:15766","DOID:0110373","ICD10CM:H35.5","MEDGEN:481671","OMIM:614180","UMLS:C3280041"],"synonyms":[{"name":"CLRN1 retinitis pigmentosa","type":"exact"},{"name":"RP61","type":"exact"},{"name":"retinitis pigmentosa 61","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in CLRN1","type":"exact"},{"name":"retinitis pigmentosa type 61","type":"exact"}],"termid":"MONDO:0013610","xrefs":{"Monarch":{"xref_id":"0013610"}}}


id: GO:0106041
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of GABA-A receptor activity.","definition_xrefs":["PMID:24044036"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of GABA-A receptor activity (obsolete GO:0106041)","termid":"GO:0106041"}


id: PBO:0066220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 25","termid":"PBO:0066220"}


id: PBO:0056511
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"muscleblind like splicing regulator 1","termid":"PBO:0056511"}


id: GO:2000762
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of phenylpropanoid metabolic process.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of secondary metabolic process","termid":"GO:0043455"},{"relation_name":"regulates","term_name":"phenylpropanoid metabolic process","termid":"GO:0009698"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"regulation of phenylpropanoid metabolic process","synonyms":[{"name":"regulation of phenylpropanoid metabolism","type":"exact"}],"termid":"GO:2000762"}


id: _global:indirectly_causally_upstream_of
data:
  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is indirectly causally upstream of q iff p is causally upstream of q and there exists some process r such that p is causally upstream of r and r is causally upstream of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_upstream_of","termid":"_global:causally_upstream_of"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"indirectly_causally_upstream_of","secondary_identifiers":["RO:0012011"],"termid":"_global:indirectly_causally_upstream_of"}


id: MONDO:0859250
data:
  {"annotated_genes":["SJAG_04587"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88981],"is_not":false,"summary":null,"term":"MONDO:0859250"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04587":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with microcephaly, hypotonia, nystagmus, and seizures","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:619876","UMLS:C5676986","MEDGEN:1810140"],"termid":"MONDO:0859250","terms_by_termid":{"MONDO:0859250":null},"xrefs":{"Monarch":{"xref_id":"0859250"}}}


id: PBO:0016098
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by S. cerevisiae BOI2","termid":"PBO:0016098"}


id: PBO:0043701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 5B pseudogene 7","termid":"PBO:0043701"}


id: GO:0033311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways leading to the formation of chlorophyll a, via the intermediate phytyl diphosphate.","definition_xrefs":["GOC:mah","MetaCyc:PWY-5086"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chlorophyll a biosynthetic process","termid":"GO:0033305"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"chlorophyll a biosynthetic process via phytyl diphosphate","synonyms":[{"name":"chlorophyll a anabolism via phytyl diphosphate","type":"exact"},{"name":"chlorophyll a biosynthesis via phytyl diphosphate","type":"exact"},{"name":"chlorophyll a biosynthetic process via phytyl-PP","type":"exact"},{"name":"chlorophyll a formation via phytyl chlorophyll a formation via phytyl-PP","type":"exact"},{"name":"chlorophyll a synthesis via phytyl diphosphate","type":"exact"}],"termid":"GO:0033311"}


id: MOD:00066
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a glycine residue to N-formylglycine.","definition_xrefs":["PubMed:5139483","RESID:AA0057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-formylated residue","termid":"MOD:00409"},{"relation_name":"is_a","term_name":"modified glycine residue","termid":"MOD:00908"},{"relation_name":"is_a","term_name":"alpha-amino acylated residue","termid":"MOD:01696"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N-formylglycine","synonyms":[{"name":"(formylamino)acetic acid","type":"exact"},{"name":"(formylamino)ethanoic acid","type":"exact"},{"name":"(formylazanyl)ethanoic acid","type":"exact"},{"name":"2-formamidoacetic acid","type":"exact"},{"name":"2-formamidoethanoic acid","type":"exact"},{"name":"MOD_RES N-formylglycine","type":"exact"},{"name":"N(alpha)-formylglycine","type":"exact"},{"name":"N-formylated glycine","type":"exact"},{"name":"N-formylglycine","type":"exact"},{"name":"NFoGly","type":"exact"}],"termid":"MOD:00066"}


id: FYPO:0004982
data:
  {"alleles_by_uniquename":{"SJAG_02621:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02621","name":"ago1delta","uniquename":"SJAG_02621:allele-1"},"SJAG_03118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03118","name":"leo1delta","uniquename":"SJAG_03118:allele-1"},"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121521,121523],"is_not":false,"summary":null,"term":"FYPO:0004982"}],"single_locus_phenotype":[{"annotations":[121509],"is_not":false,"summary":null,"term":"FYPO:0004982"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which RNAs transcribed from the centromeric region are present at greater levels than normal.","definition_xrefs":["PomBase:mah","PMID:26369364"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased ncRNA level during vegetative growth","termid":"FYPO:0008146"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02621":null,"SJAG_03118":null,"SJAG_03689":null},"genotype_count":3,"genotypes_by_uniquename":{"ago1delta__leo1delta":{"display_name":"ago1delta leo1delta","display_uniquename":"ago1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02621:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]},"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"dcr1delta__leo1delta":{"display_name":"dcr1delta leo1delta","display_uniquename":"dcr1delta__leo1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_03118:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0001320","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_03689","SJAG_03118","SJAG_02621"],"name":"increased centromeric transcript level","references_by_uniquename":{"PMID:35226668":null},"single_locus_annotated_genes":["SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta"],"synonyms":[{"name":"increased accumulation of centromeric transcripts","type":"related"},{"name":"increased accumulation of centromeric transcripts during vegetative growth","type":"related"},{"name":"increased centromere transcript level","type":"exact"},{"name":"increased centromere-derived transcript level","type":"exact"},{"name":"increased centromeric transcript level during mitotic cell cycle","type":"related"},{"name":"increased centromeric transcript level during vegetative growth","type":"exact"},{"name":"increased level of centromeric transcripts","type":"exact"}],"termid":"FYPO:0004982","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0004982":null}}


id: GO:0042480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of eye photoreceptor development.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell development","termid":"GO:0010721"},{"relation_name":"is_a","term_name":"regulation of eye photoreceptor cell development","termid":"GO:0042478"},{"relation_name":"negatively_regulates","term_name":"eye photoreceptor cell development","termid":"GO:0042462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of eye photoreceptor cell development","synonyms":[{"name":"down regulation of eye photoreceptor cell development","type":"exact"},{"name":"down-regulation of eye photoreceptor cell development","type":"exact"},{"name":"downregulation of eye photoreceptor cell development","type":"exact"},{"name":"inhibition of eye photoreceptor cell development","type":"narrow"},{"name":"negative regulation of eye photoreceptor development","type":"exact"}],"termid":"GO:0042480"}


id: PBO:0002127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RTA1-like protein","termid":"PBO:0002127"}


id: PBO:0034498
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_cardiolipin_level","termid":"PBO:0034498"}


id: GO:0097040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phthiocerol, a lipid-based 1,3-glycol consisting of (3S,4R)-3-methoxy-4-methylnonacosane having (9R)- and (11S)-hydroxy substituents.","definition_xrefs":["GOC:ecd","PMID:9201977","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"glycol biosynthetic process","termid":"GO:0042845"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"phthiocerol biosynthetic process","synonyms":[{"name":"phthiocerol anabolism","type":"exact"},{"name":"phthiocerol biosynthesis","type":"exact"},{"name":"phthiocerol formation","type":"exact"},{"name":"phthiocerol synthesis","type":"exact"}],"termid":"GO:0097040"}


id: PBO:0069074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 321, pseudogene","termid":"PBO:0069074"}


id: MONDO:0011808
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract that has material basis in mutation in the region 2p12.","definition_xrefs":["DOID:0110233","PMID:12091400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"early-onset nuclear cataract","termid":"MONDO:0020376"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cataract 27","secondary_identifiers":["MESH:C564596","GARD:18235","MEDGEN:335448","OMIM:607304","UMLS:C1846520"],"synonyms":[{"name":"CTRCT27","type":"exact"},{"name":"Ccnp","type":"related"},{"name":"cataract 27","type":"exact"},{"name":"cataract 27 nuclear progressive","type":"exact"},{"name":"cataract 27, nuclear progressive","type":"related"},{"name":"cataract type 27","type":"exact"}],"termid":"MONDO:0011808","xrefs":{"Monarch":{"xref_id":"0011808"}}}


id: GO:0044490
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the activity of a voltage-gated sodium channel in another organism.","definition_xrefs":["PMID:21781281","GOC:fj","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of voltage-gated sodium channel activity in another organism (obsolete GO:0044490)","synonyms":[{"name":"positive regulation of voltage-gated sodium channel activity in other organism","type":"exact"}],"termid":"GO:0044490"}


id: PR:O94562
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.03c gene.","definition_xrefs":["UniProtKB:O94562","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized aminotransferase C1771.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.03c","synonyms":[{"name":"Spom972h-SPBC1773.03c","type":"exact"}],"termid":"PR:O94562"}


id: FYECO:0000308
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which doxorubicin was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ doxorubicin","synonyms":[{"name":"+ 14-hydroxydaunomycin ","type":"related"},{"name":"+ 14-hydroxydaunorubicine ","type":"related"},{"name":"+ adriamycin","type":"related"}],"termid":"FYECO:0000308"}


id: GO:0030379
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with neurotensin, a neuropeptide active in the central and peripheral nervous system in mammals, and transmitting the signal from one side of the membrane to the other by a mechanism independent of coupling to G proteins.","definition_xrefs":["GOC:mah","PMID:9756851","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane signaling receptor activity","termid":"GO:0004888"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"neurotensin receptor activity, non-G protein-coupled","synonyms":[{"name":"neurotensin receptor activity, non G protein coupled","type":"exact"},{"name":"neurotensin receptor activity, non-G-protein coupled","type":"exact"},{"name":"non G protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein coupled neurotensin receptor activity","type":"exact"},{"name":"non-G-protein-coupled neurotensin receptor activity","type":"exact"}],"termid":"GO:0030379"}


id: GO:0047411
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 H2O + 2-(acetamidomethylene)succinate = CO2 + NH3 + succinate semialdehyde + acetate.","definition_xrefs":["EC:3.5.1.29","MetaCyc:3.5.1.29-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0016810","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"2-(acetamidomethylene)succinate hydrolase activity","secondary_identifiers":["RHEA:10432"],"synonyms":[{"name":"2-(acetamidomethylene)succinate amidohydrolase (deaminating, decarboxylating)","type":"related"},{"name":"alpha-(N-acetylaminomethylene)succinic acid hydrolase activity","type":"related"}],"termid":"GO:0047411"}


id: GO:0033332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ent-kaurene. Ent-kaurene is a tetracyclic diterpenoid that is a precursor of several plant isoprenoids, including gibberellins.","definition_xrefs":["GOC:mah","PMID:17064690","MetaCyc:PWY-5032"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ent-kaurene metabolic process","termid":"GO:0033331"},{"relation_name":"is_a","term_name":"terpene biosynthetic process","termid":"GO:0046246"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"ent-kaurene biosynthetic process","synonyms":[{"name":"ent-kaurene anabolism","type":"exact"},{"name":"ent-kaurene biosynthesis","type":"exact"},{"name":"ent-kaurene formation","type":"exact"},{"name":"ent-kaurene synthesis","type":"exact"}],"termid":"GO:0033332"}


id: PBO:0044171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTNNA1 antisense RNA 1","termid":"PBO:0044171"}


id: MONDO:0014157
data:
  {"annotated_genes":["SJAG_02818"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87931],"is_not":false,"summary":null,"term":"MONDO:0014157"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"progeroid syndrome","termid":"MONDO:0015333"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"premature aging syndrome","termid":"MONDO:0019303"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02818":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0019303"}],"interesting_parent_ids":["MONDO:0019303"],"is_obsolete":false,"name":"mandibular hypoplasia-deafness-progeroid syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:363649","UMLS:C3715192","GARD:10989","MEDGEN:811623","OMIM:615381"],"synonyms":[{"name":"MDP syndrome","type":"exact"},{"name":"MDPL","type":"related"},{"name":"mandibular hypoplasia, deafness, progeroid features","type":"related"},{"name":"mandibular hypoplasia, deafness, progeroid features, and lipodystrophy syndrome","type":"related"},{"name":"mandibular hypoplasia-hearing loss-progeroid syndrome","type":"exact"}],"termid":"MONDO:0014157","terms_by_termid":{"MONDO:0014157":null},"xrefs":{"Monarch":{"xref_id":"0014157"}}}


id: PBO:0005851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ark1/Prk1 family protein kinase Ppk38","termid":"PBO:0005851"}


id: PBO:0075782
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRSF6 pseudogene 2","termid":"PBO:0075782"}


id: SO:0002140
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An origin of replication that initiates early in S phase.","definition_xrefs":["PMID:23348837","PMID:9115207"],"direct_ancestors":[{"relation_name":"is_a","term_name":"origin_of_replication","termid":"SO:0000296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"early_origin_of_replication","synonyms":[{"name":"early origin","type":"exact"},{"name":"early origin of replication","type":"exact"},{"name":"early replication origin","type":"exact"}],"termid":"SO:0002140"}


id: PBO:0087966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter of the mitochondrial inner membrane that exports magnesium; involved in mitochondrial Mg2+ homeostasis; has similarity to human mitochondrial ATP-Mg/Pi carriers","termid":"PBO:0087966"}


id: PBO:0045224
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DnaJ heat shock protein family (Hsp40) member C12","termid":"PBO:0045224"}


id: MONDO:0100560
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare form of chronic conjunctivitis characterized by the development of firm fibrin-rich, woody-like pseudomembraneous lesions mainly on the tarsal conjunctivae. Ligneous conjunctivitis is usually the initial and most common manifestation of type I congenital plasminogen deficiency.","definition_xrefs":["OMIM:217090","PMID:12850227"],"direct_ancestors":[{"relation_name":"is_a","term_name":"conjunctival disorder","termid":"MONDO:0006170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ligneous conjunctivitis","secondary_identifiers":["UMLS:C1274789","ICD10CM:H10.51","icd11.foundation:1464324556","MEDGEN:226895"],"termid":"MONDO:0100560","xrefs":{"Monarch":{"xref_id":"0100560"}}}


id: GO:0015159
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of polysaccharides from one side of a membrane to the other. A polysaccharide is a polymer of many (typically more than 10) monosaccharide residues linked glycosidically.","definition_xrefs":["ISBN:0815340729","GOC:ai","GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate transmembrane transporter activity","termid":"GO:0015144"},{"relation_name":"is_a","term_name":"macromolecule transmembrane transporter activity","termid":"GO:0022884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"polysaccharide transmembrane transporter activity","termid":"GO:0015159"}


id: MONDO:0020133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"}],"gene_count":0,"genotype_count":0,"name":"obsolete posterior fossa malformation (obsolete MONDO:0020133)","secondary_identifiers":["Orphanet:98519"],"termid":"MONDO:0020133","xrefs":{"Monarch":{"xref_id":"0020133"}}}


id: GO:2000376
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of oxygen metabolic process.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of oxygen metabolic process","termid":"GO:2000374"},{"relation_name":"positively_regulates","term_name":"oxygen metabolic process","termid":"GO:0072592"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oxygen metabolic process","synonyms":[{"name":"positive regulation of diatomic oxygen metabolic process","type":"exact"},{"name":"positive regulation of oxygen metabolism","type":"exact"}],"termid":"GO:2000376"}


id: FYPO:0007583
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the cytoplasm is decreased during telophase of mitosis.","definition_xrefs":["PomBase:mah","PMID:19736319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to cytoplasm","termid":"FYPO:0006099"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to cytoplasm during mitotic telophase","synonyms":[{"name":"decreased protein localisation to cytoplasm during mitotic telophase","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase during vegetative growth","type":"exact"},{"name":"decreased protein localization to cytoplasm during telophase of mitotic cell cycle","type":"exact"},{"name":"reduced protein localization to cytoplasm during mitotic telophase","type":"exact"}],"termid":"FYPO:0007583"}


id: PBO:0012258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteiasome complex subunit beta 6","termid":"PBO:0012258"}


id: MONDO:0044619
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Propylthiouracil embryofetopathy is a rare teratologic disease characterized by variable congenital anomalies resulting from maternal treatment and prenatal exposure to propylthiouracil. Anomalies frequently encountered include ear malformations (e.g. accessory auricle, preauricular sinus/fistula/cyst), urinary system malformations (e.g. isolated unilateral kidney, congenital hydronephrosis), gastrointestinal anomalies (e.g. congenital bands with intestinal malrotation) and cardiac defects (e.g. situs inversus dextrocardia, cardiac outflow tract defects).","definition_xrefs":["Orphanet:485358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"propylthiouracil embryofetopathy","secondary_identifiers":["MEDGEN:1798942","UMLS:C5567519"],"synonyms":[{"name":"PTU embryofetopathy","type":"exact"},{"name":"PTU embryopathy","type":"exact"},{"name":"propylthiouracil embryopathy","type":"exact"}],"termid":"MONDO:0044619","xrefs":{"Monarch":{"xref_id":"0044619"}}}


id: GO:0070926
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the activity of an ATP:ADP antiporter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of ATP:ADP antiporter activity (obsolete GO:0070926)","termid":"GO:0070926"}


id: MONDO:0017516
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"non-syndromic brachydactyly of fingers","termid":"MONDO:0017451"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"brachydactyly of fingers, bilateral","secondary_identifiers":["MEDGEN:1665318","Orphanet:295130","icd11.foundation:412618992","UMLS:C4751023"],"synonyms":[{"name":"short fingers, bilateral","type":"exact"}],"termid":"MONDO:0017516","xrefs":{"Monarch":{"xref_id":"0017516"}}}


id: PBO:0079007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Thr (anticodon TGT) 1-1","termid":"PBO:0079007"}


id: PBO:0077424
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM161B divergent transcript","termid":"PBO:0077424"}


id: MONDO:0859341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 15","secondary_identifiers":["OMIM:620177","UMLS:C5774279","DOID:0060968","MEDGEN:1824052"],"termid":"MONDO:0859341","xrefs":{"Monarch":{"xref_id":"0859341"}}}


id: MONDO:0005194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infection with any of the rotaviruses. Specific infections include human infantile diarrhea, neonatal calf diarrhea, and epidemic diarrhea of infant mice.","definition_xrefs":["MESH:D012400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rotavirus infection","secondary_identifiers":["SCTID:18624000","MEDGEN:19835","UMLS:C0035869","EFO:0002622","ICD9:078.89"],"synonyms":[{"name":"Rotavirus caused disease or disorder","type":"exact"},{"name":"Rotavirus disease or disorder","type":"exact"},{"name":"Rotavirus infectious disease","type":"exact"}],"termid":"MONDO:0005194","xrefs":{"Monarch":{"xref_id":"0005194"}}}


id: PATO:0000698
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000698 floury (obsolete PATO:0000698)","termid":"PATO:0000698"}


id: MONDO:0012082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"Asperger syndrome","termid":"MONDO:0005259"},{"relation_name":"is_a","term_name":"Asperger syndrome, susceptibility to","termid":"MONDO:0100440"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asperger syndrome, susceptibility to, 1","secondary_identifiers":["OMIM:608638","MEDGEN:325218","UMLS:C1837646"],"synonyms":[{"name":"ASPERGER syndrome, susceptibility to, 1","type":"related"},{"name":"ASPG1","type":"exact"},{"name":"Asperger syndrome susceptibility 1, Isolated cases","type":"exact"}],"termid":"MONDO:0012082","xrefs":{"Monarch":{"xref_id":"0012082"}}}


id: PBO:0059979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 24","termid":"PBO:0059979"}


id: GO:0072132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of a mesenchymal tissue are generated and organized. A mesenchymal tissue is made up of loosely packed stellate cells.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue morphogenesis","termid":"GO:0048729"},{"relation_name":"part_of","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"mesenchyme development","termid":"GO:0060485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"mesenchyme morphogenesis","termid":"GO:0072132"}


id: GO:0046293
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of formaldehyde (methanal, H2C=O), the simplest aldehyde.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule biosynthetic process","termid":"GO:0044283"},{"relation_name":"is_a","term_name":"aldehyde biosynthetic process","termid":"GO:0046184"},{"relation_name":"is_a","term_name":"formaldehyde metabolic process","termid":"GO:0046292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"formaldehyde biosynthetic process","synonyms":[{"name":"formaldehyde anabolism","type":"exact"},{"name":"formaldehyde biosynthesis","type":"exact"},{"name":"formaldehyde formation","type":"exact"},{"name":"formaldehyde synthesis","type":"exact"},{"name":"methanal biosynthesis","type":"exact"},{"name":"methanal biosynthetic process","type":"exact"}],"termid":"GO:0046293"}


id: GO:0047772
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: carboxymethoxysuccinate = fumarate + glycolate.","definition_xrefs":["EC:4.2.99.12","RHEA:12336"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-oxygen lyase activity","termid":"GO:0016835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"carboxymethyloxysuccinate lyase activity","secondary_identifiers":["KEGG_REACTION:R01336","MetaCyc:CARBOXYMETHYLOXYSUCCINATE-LYASE-RXN"],"synonyms":[{"name":"carboxymethyloxysuccinate glycolate-lyase (fumarate-forming)","type":"related"},{"name":"carboxymethyloxysuccinate glycolate-lyase activity","type":"related"}],"termid":"GO:0047772"}


id: GO:2000918
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of glucuronoarabinoxylan catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of glucuronoxylan catabolic process","termid":"GO:2000915"},{"relation_name":"is_a","term_name":"regulation of arabinoxylan-containing compound catabolic process","termid":"GO:2000921"},{"relation_name":"regulates","term_name":"glucuronoarabinoxylan catabolic process","termid":"GO:2000887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"regulation of glucuronoarabinoxylan catabolic process","synonyms":[{"name":"regulation of glucuronoarabinoxylan catabolism","type":"exact"}],"termid":"GO:2000918"}


id: PBO:0059790
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CYB pseudogene 16","termid":"PBO:0059790"}


id: PBO:0027316
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_protein_localization_to_mitotic_spindle","termid":"PBO:0027316"}


id: PBO:0027650
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_vegetative_cell_population_growth","termid":"PBO:0027650"}


id: PR:P08647
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ras1 gene.","definition_xrefs":["UniProtKB:P08647","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ras-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17H9.09c","synonyms":[{"name":"Spom972h-ras1","type":"exact"}],"termid":"PR:P08647"}


id: PBO:0003201
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.5.1.49","termid":"PBO:0003201"}


id: PBO:0052158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium inwardly rectifying channel subfamily J member 6","termid":"PBO:0052158"}


id: GO:0014707
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the branchiomeric skeletal muscle over time, from its formation to the mature structure. The branchiomeric muscle is derived from cranial mesoderm and controls facial expression, pharyngeal and laryngeal function, operating the jaw. The muscle begins its development with the differentiation of the muscle cells and ends with the mature muscle. Branchiomeric muscles of mammals correspond to the gill musculature of fish.","definition_xrefs":["GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"muscle organ development","termid":"GO:0007517"},{"relation_name":"is_a","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"branchiomeric skeletal muscle development","termid":"GO:0014707"}


id: SO:0002237
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene which codes for 16S_rRNA, which functions as the small subunit of the ribosome in prokaryotes.","direct_ancestors":[{"relation_name":"is_a","term_name":"cytosolic_SSU_rRNA_gene","termid":"SO:0002362"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_rRNA_16S_gene","synonyms":[{"name":"16S rRNA gene","type":"exact"},{"name":"16S_rRNA_gene","type":"exact"}],"termid":"SO:0002237"}


id: GO:0098573
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the mitochondrial membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of mitochondrial membrane (obsolete GO:0098573)","synonyms":[{"name":"intrinsic to mitochondrial membrane","type":"narrow"}],"termid":"GO:0098573"}


id: MONDO:0000097
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete thyroid dyshormonogenesis (obsolete MONDO:0000097)","termid":"MONDO:0000097","xrefs":{"Monarch":{"xref_id":"0000097"}}}


id: PBO:0038465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP binding cassette subfamily A member 4","termid":"PBO:0038465"}


id: MONDO:0005323
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Bacterial diseases that are potentially transmitted or propagated by sexual conduct.","definition_xrefs":["MESH:D015231"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial infectious disease","termid":"MONDO:0005113"},{"relation_name":"is_a","term_name":"sexually transmitted disease","termid":"MONDO:0021681"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bacterial sexually transmitted disease","secondary_identifiers":["EFO:0003955","MEDGEN:20728","UMLS:C0036917"],"termid":"MONDO:0005323","xrefs":{"Monarch":{"xref_id":"0005323"}}}


id: PBO:0078371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Glu (TTC) 15-1","termid":"PBO:0078371"}


id: SO:1000150
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A chromosomal translocation whereby three breaks occurred in three different chromosomes. The centric segment resulting from the first break listed is joined to the acentric segment resulting from the second, rather than the third.","definition_xrefs":["FB:reference_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interchromosomal_translocation","termid":"SO:0002060"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclic_translocation","synonyms":[{"name":"cyclic translocation","type":"exact"}],"termid":"SO:1000150"}


id: PATO:0000005
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000005 absolute activity (obsolete PATO:0000005)","termid":"PATO:0000005"}


id: GO:0048771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of existing tissues. This process can either change the characteristics of a tissue such as in blood vessel remodeling, or result in the dynamic equilibrium of a tissue such as in bone remodeling.","definition_xrefs":["GOC:ebc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organismal process","termid":"GO:0032501"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"tissue remodeling","synonyms":[{"name":"tissue remodelling","type":"exact"}],"termid":"GO:0048771"}


id: PBO:0028198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_beta-glucanase","termid":"PBO:0028198"}


id: PATO:0000386
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A hardness quality of being rigid and resistant to pressure.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"hardness","termid":"PATO:0000048"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hard","synonyms":[{"name":"firm","type":"related"},{"name":"impenetrable","type":"related"},{"name":"tough","type":"related"}],"termid":"PATO:0000386"}


id: PBO:0075491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPATA31 subfamily F member 1","termid":"PBO:0075491"}


id: PBO:0047975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member B, pseudogene","termid":"PBO:0047975"}


id: PBO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine-dependent methyltransferase (predicted)","termid":"PBO:0002258"}


id: GO:0031529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a ruffle, a projection at the leading edge of a crawling cell.","definition_xrefs":["GOC:mah","PMID:10036235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ruffle organization","synonyms":[{"name":"ruffle organisation","type":"exact"},{"name":"ruffle organization and biogenesis","type":"related"}],"termid":"GO:0031529"}


id: GO:0050699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a WW domain of a protein, a small module composed of 40 amino acids and plays a role in mediating protein-protein interactions via proline-rich regions.","definition_xrefs":["PMID:14531730"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"WW domain binding","termid":"GO:0050699"}


id: PBO:0074931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 98","termid":"PBO:0074931"}


id: FYECO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Any condition in which cells are first grown in a medium with one nitrogen source, and then shifted to a medium with a different nitrogen source.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping sequential growth conditions","termid":"FYECO:0000094"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitrogen source shift","termid":"FYECO:0000221"}


id: GO:0071077
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of adenosine 3',5'-bisphosphate from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenine nucleotide transmembrane transporter activity","termid":"GO:0000295"},{"relation_name":"is_a","term_name":"purine ribonucleotide transmembrane transporter activity","termid":"GO:0005346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"adenosine 3',5'-bisphosphate transmembrane transporter activity","synonyms":[{"name":"adenosine 3',5'-diphosphate transporter activity","type":"exact"},{"name":"adenosine 3'-phosphate-5'-phosphate transmembrane transporter activity","type":"exact"}],"termid":"GO:0071077"}


id: PBO:0083527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF SAS10/YDL153C, a component of the small ribosomal subunit processosome","termid":"PBO:0083527"}


id: GO:0047008
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADP+ + pregnan-21-ol = H+ + NADPH + pregnan-21-al.","definition_xrefs":["RHEA:23712"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0033764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"pregnan-21-ol dehydrogenase (NADP+) activity","secondary_identifiers":["KEGG_REACTION:R03044","MetaCyc:1.1.1.151-RXN","EC:1.1.1.151"],"synonyms":[{"name":"21-hydroxy steroid (nicotinamide adenine dinucleotide phosphate) dehydrogenase activity","type":"broad"},{"name":"21-hydroxy steroid dehydrogenase (nicotinamide adenine dinucleotide phosphate) activity","type":"broad"},{"name":"21-hydroxy steroid dehydrogenase activity","type":"broad"},{"name":"21-hydroxysteroid dehydrogenase (NADP+) activity","type":"broad"},{"name":"21-hydroxysteroid:NADP+ 21-oxidoreductase activity","type":"broad"},{"name":"NADP-21-hydroxysteroid dehydrogenase activity","type":"broad"}],"termid":"GO:0047008"}


id: FYPO:0001238
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing staurosporine.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0000139","FYPO:0002057"],"is_obsolete":false,"name":"normal growth on staurosporine","synonyms":[{"name":"normal cell population growth in presence of staurosporine","type":"exact"},{"name":"normal cell population growth on staurosporine","type":"exact"},{"name":"normal cellular response to staurosporine","type":"related"},{"name":"normal vegetative cell population growth on staurosporine","type":"exact"}],"termid":"FYPO:0001238"}


id: FYPO:0008266
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphate (Pi) in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:37949217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular phosphate (Pi) level","termid":"FYPO:0008266"}


id: PBO:0078767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (ATT) 1-2","termid":"PBO:0078767"}


id: GO:1903818
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of voltage-gated potassium channel activity.","definition_xrefs":["GO_REF:0000059","GOC:TermGenie","PMID:19219384"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of potassium ion transmembrane transporter activity","termid":"GO:1901018"},{"relation_name":"is_a","term_name":"positive regulation of cation channel activity","termid":"GO:2001259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"positive regulation of voltage-gated potassium channel activity","synonyms":[{"name":"activation of voltage gated potassium channel activity","type":"narrow"},{"name":"activation of voltage-dependent potassium channel activity","type":"narrow"},{"name":"activation of voltage-gated potassium channel activity","type":"narrow"},{"name":"activation of voltage-gated potassium ion channel activity","type":"narrow"},{"name":"activation of voltage-sensitive potassium channel","type":"narrow"},{"name":"positive regulation of voltage gated potassium channel activity","type":"exact"},{"name":"positive regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"positive regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"positive regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"up regulation of voltage gated potassium channel activity","type":"exact"},{"name":"up regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"up regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"up regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"up regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"up-regulation of voltage gated potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated potassium channel activity","type":"exact"},{"name":"up-regulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"up-regulation of voltage-sensitive potassium channel","type":"exact"},{"name":"upregulation of voltage gated potassium channel activity","type":"exact"},{"name":"upregulation of voltage-dependent potassium channel activity","type":"exact"},{"name":"upregulation of voltage-gated potassium channel activity","type":"exact"},{"name":"upregulation of voltage-gated potassium ion channel activity","type":"exact"},{"name":"upregulation of voltage-sensitive potassium channel","type":"exact"}],"termid":"GO:1903818"}


id: PBO:0065132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"parkin RBR E3 ubiquitin protein ligase","termid":"PBO:0065132"}


id: GO:0051322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle phase, following metaphase, during which the chromosomes separate and migrate towards the poles of the spindle.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle phase","termid":"GO:0022403"},{"relation_name":"part_of","term_name":"M phase","termid":"GO:0000279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anaphase","secondary_identifiers":["Wikipedia:Anaphase"],"termid":"GO:0051322"}


id: PBO:0045945
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFR3 homolog B","termid":"PBO:0045945"}


id: MONDO:0006558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pregnancy-associated autoimmune skin disease that is characterized by an itchy rash that develops into blisters. It is most common during the second and third trimesters of pregnancy. It was previously known as herpes gestationis although it has no association with the herpes virus whatsoever.","direct_ancestors":[{"relation_name":"is_a","term_name":"pemphigus","termid":"MONDO:0006594"},{"relation_name":"is_a","term_name":"pregnancy disorder","termid":"MONDO:0024575"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"pemphigoid gestationis","secondary_identifiers":["Wikipedia:Gestational_pemphigoid","EFO:1000709","ICD10CM:O26.4","DOID:0040098","DOID:14482","NCIT:C85003","UMLS:C0019343","GARD:6497","icd11.foundation:1405755890","ICD9:646.80","MedDRA:10019939","MESH:D006559","SCTID:86081009","MEDGEN:9233","Orphanet:63275"],"synonyms":[{"name":"Herpes gestationis","type":"exact"},{"name":"Herpes gestationis (disorder)","type":"exact"},{"name":"Herpes gestationis NOS (disorder)","type":"exact"},{"name":"Herpes gestationis unspecified (disorder)","type":"exact"},{"name":"gestational herpes","type":"exact"},{"name":"gestational pemphigoid","type":"exact"},{"name":"pemphigoid gestationis","type":"exact"},{"name":"pemphigus gestationis","type":"related"}],"termid":"MONDO:0006558","xrefs":{"Monarch":{"xref_id":"0006558"}}}


id: PBO:0050498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homeobox B8","termid":"PBO:0050498"}


id: GO:0010647
data:
  {"annotated_genes":["SJAG_05184","SJAG_06621","SJAG_00781","SJAG_00209","SJAG_03903","SJAG_03371","SJAG_01837","SJAG_02424","SJAG_04496","SJAG_05030","SJAG_01181","SJAG_06592","SJAG_03969","SJAG_03453","SJAG_01150","SJAG_02135","SJAG_00318","SJAG_00424","SJAG_03568","SJAG_00457","SJAG_01978","SJAG_02231","SJAG_00143","SJAG_06588","SJAG_03828","SJAG_03936","SJAG_06622","SJAG_02945","SJAG_03705","SJAG_04259","SJAG_01587","SJAG_04776","SJAG_01632","SJAG_00610","SJAG_02486","SJAG_00845","SJAG_02682","SJAG_03089","SJAG_02183","SJAG_00561","SJAG_04551","SJAG_00027","SJAG_03048","SJAG_03907","SJAG_03405","SJAG_04666","SJAG_00082","SJAG_01199","SJAG_04910","SJAG_02605","SJAG_01805","SJAG_01787"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104163,113032],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[69627,119971,91446,92777,94427,90091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[115847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[118737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[110981,110980,110984,120362,114538,113874,97271,110982,110979,110983,110985,119438],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[92856,90150,105717,117651,116681],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[112576,95819,92012,89537,104402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[115496,115497,62519,80367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[74961,71131],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[74486,90318,78729,98113,77855,77347,78394,112592,96327,75952,114918],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[99757,109027,93204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that increases the frequency, rate or extent of cell communication. Cell communication is the process that mediates interactions between a cell and its surroundings. Encompasses interactions such as signaling or attachment between one cell and another cell, between a cell and an extracellular matrix, or between a cell and any other aspect of its environment.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell communication","termid":"GO:0010646"},{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"positively_regulates","term_name":"cell communication","termid":"GO:0007154"}],"gene_count":52,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00209":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01199":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01978":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02424":null,"SJAG_02486":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03089":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03568":null,"SJAG_03705":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03936":null,"SJAG_03969":null,"SJAG_04259":null,"SJAG_04496":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell communication","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010647","terms_by_termid":{"GO:0031031":null,"GO:0032008":null,"GO:0050850":null,"GO:0062038":null,"GO:0090267":null,"GO:1900745":null,"GO:1903139":null,"GO:1904263":null,"GO:1904515":null,"GO:1905326":null,"GO:2000640":null}}


id: PBO:0051309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-1 (pseudogene)","termid":"PBO:0051309"}


id: GO:1900638
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of asperfuranone biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of asperfuranone biosynthetic process","termid":"GO:1900637"},{"relation_name":"is_a","term_name":"negative regulation of polyketide biosynthetic process","termid":"GO:1900733"},{"relation_name":"is_a","term_name":"negative regulation of alcohol biosynthetic process","termid":"GO:1902931"},{"relation_name":"negatively_regulates","term_name":"asperfuranone biosynthetic process","termid":"GO:1900554"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of asperfuranone biosynthetic process","synonyms":[{"name":"down regulation of asperfuranone anabolism","type":"exact"},{"name":"down regulation of asperfuranone biosynthesis","type":"exact"},{"name":"down regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"down regulation of asperfuranone formation","type":"exact"},{"name":"down regulation of asperfuranone synthesis","type":"exact"},{"name":"down-regulation of asperfuranone anabolism","type":"exact"},{"name":"down-regulation of asperfuranone biosynthesis","type":"exact"},{"name":"down-regulation of asperfuranone biosynthetic process","type":"exact"},{"name":"down-regulation of asperfuranone formation","type":"exact"},{"name":"down-regulation of asperfuranone synthesis","type":"exact"},{"name":"downregulation of asperfuranone anabolism","type":"exact"},{"name":"downregulation of asperfuranone biosynthesis","type":"exact"},{"name":"downregulation of asperfuranone biosynthetic process","type":"exact"},{"name":"downregulation of asperfuranone formation","type":"exact"},{"name":"downregulation of asperfuranone synthesis","type":"exact"},{"name":"inhibition of asperfuranone anabolism","type":"exact"},{"name":"inhibition of asperfuranone biosynthesis","type":"exact"},{"name":"inhibition of asperfuranone biosynthetic process","type":"narrow"},{"name":"inhibition of asperfuranone formation","type":"exact"},{"name":"inhibition of asperfuranone synthesis","type":"exact"},{"name":"negative regulation of asperfuranone anabolism","type":"exact"},{"name":"negative regulation of asperfuranone biosynthesis","type":"exact"},{"name":"negative regulation of asperfuranone formation","type":"exact"},{"name":"negative regulation of asperfuranone synthesis","type":"exact"}],"termid":"GO:1900638"}


id: GO:0075346
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which an organism adds one or more ubiquitin groups to a protein of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modification by symbiont of host protein by ubiquitination (obsolete GO:0075346)","synonyms":[{"name":"modification by symbiont of host protein by ubiquitinylation","type":"exact"},{"name":"modification by symbiont of host protein by ubiquitylation","type":"exact"}],"termid":"GO:0075346"}


id: GO:0102865
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a gamma-linolenoyl-[glycerolipid] + 2 ferrocytochrome b5 + O2 + 2 H+ = a (9Z,12Z)-octadeca-9,12-dien-6-ynoyl-[glycerolipid] + 2 ferricytochrome b5 + 2 H2O.","definition_xrefs":["RHEA:46536","PMID:10848999","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water","termid":"GO:0016717"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"delta6-acyl-lipid desaturase activity","secondary_identifiers":["MetaCyc:RXN-8343","EC:1.14.19.38"],"termid":"GO:0102865"}


id: GO:0098928
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Signal transduction in which the initial step occurs in a presynapse.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signal transduction","termid":"GO:0007165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"presynaptic signal transduction","synonyms":[{"name":"presynaptic signaling pathway","type":"exact"}],"termid":"GO:0098928"}


id: PBO:0083836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Evolutionarily conserved 19S regulatory particle assembly-chaperone; proteasome-interacting protein involved in the assembly of the base subcomplex of the 19S proteasomal regulatory particle (RP); ortholog of human oncoprotein gankyrin, also known as p28, which interacts with the Rb tumor suppressor and CDK4/6","termid":"PBO:0083836"}


id: PBO:0074251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier organic anion transporter family member 1B1","termid":"PBO:0074251"}


id: PBO:0027818
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_level_of_amino_acid_catabolism_gene_mRNA_during_vegetative_growth","termid":"PBO:0027818"}


id: PR:A6X970
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC23C4.04c gene.","definition_xrefs":["PRO:DNx","UniProtKB:A6X970"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C23C4.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23C4.04c","synonyms":[{"name":"Spom972h-SPAC23C4.04c","type":"exact"}],"termid":"PR:A6X970"}


id: PBO:0116768
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STEAP1B antisense RNA 2","termid":"PBO:0116768"}


id: GO:0016074
data:
  {"annotated_genes":["SJAG_06613","SJAG_04527","SJAG_04942","SJAG_01176","SJAG_04768","SJAG_02382","SJAG_02553","SJAG_04321","SJAG_02156","SJAG_04754","SJAG_01521","SJAG_01369","SJAG_00752","SJAG_03745","SJAG_04153","SJAG_03112","SJAG_03984","SJAG_02350","SJAG_00943","SJAG_03234","SJAG_03179","SJAG_01191","SJAG_00854"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119736],"is_not":false,"summary":null,"term":"GO:0016074"},{"annotations":[75235,112245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000494"},{"annotations":[104184],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106410"},{"annotations":[62230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034963"},{"annotations":[82230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000495"},{"annotations":[115548,117367,93095,106797],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034965"},{"annotations":[72573,72228],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071036"},{"annotations":[77030,79633,76278,117509,78197,75161,72579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071051"},{"annotations":[61876],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031126"},{"annotations":[90388],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016077"},{"annotations":[89499,92805],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043144"},{"annotations":[77445],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034247"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving snoRNA, small nucleolar RNA, any of a class of small RNAs that are associated with the eukaryotic nucleus as components of small nucleolar ribonucleoproteins. They participate in the processing or modifications of many RNAs, mostly ribosomal RNAs (rRNAs) though snoRNAs are also known to target other classes of RNA, including spliceosomal RNAs, tRNAs, and mRNAs via a stretch of sequence that is complementary to a sequence in the targeted RNA.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA metabolic process","termid":"GO:0016070"}],"gene_count":23,"genes_by_uniquename":{"SJAG_00752":null,"SJAG_00854":null,"SJAG_00943":null,"SJAG_01176":null,"SJAG_01191":null,"SJAG_01369":null,"SJAG_01521":null,"SJAG_02156":null,"SJAG_02350":null,"SJAG_02382":null,"SJAG_02553":null,"SJAG_03112":null,"SJAG_03179":null,"SJAG_03234":null,"SJAG_03745":null,"SJAG_03984":null,"SJAG_04153":null,"SJAG_04321":null,"SJAG_04527":null,"SJAG_04754":null,"SJAG_04768":null,"SJAG_04942":null,"SJAG_06613":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sno(s)RNA metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"box C/D sRNA metabolic process","type":"narrow"},{"name":"snoRNA metabolism","type":"narrow"}],"termid":"GO:0016074","terms_by_termid":{"GO:0000494":null,"GO:0000495":null,"GO:0016074":null,"GO:0016077":null,"GO:0031126":null,"GO:0034247":null,"GO:0034963":null,"GO:0034965":null,"GO:0043144":null,"GO:0071036":null,"GO:0071051":null,"GO:0106410":null}}


id: MONDO:0008633
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An intermediate form of cryopyrin-associated periodic syndrome (CAPS) and is characterized by recurrent fever (with malaise and chills), recurrent urticaria-like skin rash, sensorineural deafness, general signs of inflammation (eye redness, headaches, arthralgia/myalgia) and potentially life-threatening secondary amyloidosis (AA type).","definition_xrefs":["Orphanet:575"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"cryopyrin-associated periodic syndrome","termid":"MONDO:0016168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0000426"],"is_obsolete":false,"name":"Muckle-Wells syndrome","secondary_identifiers":["ICD9:708.8","OMIM:191900","GARD:8472","SCTID:402417009","NCIT:C119054","MedDRA:10064569","MEDGEN:120634","NANDO:1200467","NORD:1459","icd11.foundation:1983358487","NANDO:2201067","UMLS:C0268390","DOID:0050854"],"synonyms":[{"name":"Cryopyrin-associated periodic syndrome 2","type":"related"},{"name":"MUCKLE-Wells syndrome","type":"related"},{"name":"MWS","type":"related"},{"name":"Muckle Wells syndrome","type":"related"},{"name":"Muckle-Wells syndrome","type":"exact"},{"name":"Uda syndrome","type":"related"},{"name":"neutrophilic urticaria","type":"exact"},{"name":"urticaria, deafness and amyloidosis","type":"related"},{"name":"urticaria-deafness-amyloidosis syndrome","type":"related"}],"termid":"MONDO:0008633","xrefs":{"Monarch":{"xref_id":"0008633"}}}


id: MONDO:0017849
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Siegler-Brewer-Carey syndrome is characterized by cataracts, otitis media, intestinal malabsorption, chronic respiratory infection, and failure to thrive. It has been recently described in two sibs born to consanguineous parents. The patients also developed recurrent pneumonia and progressive azotemia leading to end-stage renal disease. Both children died of overwhelming infection (sepsis, meningitis). An autosomal recessive mode of inheritance was proposed.","definition_xrefs":["Orphanet:3167"],"direct_ancestors":[{"relation_name":"is_a","term_name":"respiratory system disorder","termid":"MONDO:0005087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Siegler-Brewer-Carey syndrome","secondary_identifiers":["MESH:C537335","SCTID:721076000","UMLS:C2931473","GARD:4867","MEDGEN:419088"],"synonyms":[{"name":"Siegler Brewer Carey syndrome","type":"related"},{"name":"fatal multisystem syndrome involving the eyes, ears, lungs, intestines, and kidneys","type":"related"}],"termid":"MONDO:0017849","xrefs":{"Monarch":{"xref_id":"0017849"}}}


id: PBO:0048353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde-3-phosphate dehydrogenase pseudogene 64","termid":"PBO:0048353"}


id: PBO:0049874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatic and glial cell adhesion molecule","termid":"PBO:0049874"}


id: MONDO:0019506
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome is characterized by precocious obesity, congenital hypothyroidism, neonatal colitis, cardiac hypertrophy, craniosynostosis and developmental delay. It has been described in two brothers, one of whom died within the first month of life. The parents of the two children were nonconsanguineous and in good health, however, the pregnancies were complicated by a maternal HELLP syndrome (Haemolysis, Elevated Liver enzymes and Low Platelets). The mode of inheritance has not yet been clearly established.","definition_xrefs":["Orphanet:88643"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"obesity-colitis-hypothyroidism-cardiac hypertrophy-developmental delay syndrome","secondary_identifiers":["UMLS:C4302879","SCTID:722051004","MEDGEN:928548","GARD:19092"],"termid":"MONDO:0019506","xrefs":{"Monarch":{"xref_id":"0019506"}}}


id: PBO:0040670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAN antisense RNA 2","termid":"PBO:0040670"}


id: PBO:0089050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2',3'-cyclic-nucleotide 3'-phosphodiesterase","termid":"PBO:0089050"}


id: GO:0018036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-asparagine amide by hydrolysis and oxidation of an interior Asn-Gly peptide in a secreted protein.","definition_xrefs":["RESID:AA0083"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-asparagine amidation (obsolete GO:0018036)","termid":"GO:0018036"}


id: MONDO:1011086
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urolithiasis, non-human animal","termid":"MONDO:1010267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, sheep","secondary_identifiers":["OMIA:001033-9940"],"termid":"MONDO:1011086","xrefs":{"Monarch":{"xref_id":"1011086"}}}


id: PBO:0041353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C4A antisense RNA 1","termid":"PBO:0041353"}


id: PBO:0091980
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Helicase Required for RNAi-mediated heterochromatin assembly","termid":"PBO:0091980"}


id: MONDO:0016692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An astrocytic tumor of uncertain relation to pilocytic astrocytoma. It occurs predominantly in infants and young children. It is characterized by a monomorphic architectural pattern, usually associated with the absence of Rosenthal fibers and eosinophilic granular bodies. The clinical course is usually aggressive.","definition_xrefs":["NCIT:C40315"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pilocytic astrocytoma","termid":"MONDO:0016691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pilomyxoid astrocytoma","secondary_identifiers":["DOID:4845","MEDGEN:276757","Orphanet:251615","ONCOTREE:PMA","UMLS:C1519086","GARD:20710","ICDO:9425/3"],"synonyms":[{"name":"PMA","type":"related"}],"termid":"MONDO:0016692","xrefs":{"Monarch":{"xref_id":"0016692"}}}


id: PBO:0051707
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol polyphosphate-5-phosphatase J","termid":"PBO:0051707"}


id: PBO:0091771
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CeNTaurin b5-like gene","termid":"PBO:0091771"}


id: MONDO:0003037
data:
  {"annotated_genes":["SJAG_00155","SJAG_01202","SJAG_00624","SJAG_03469"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87271],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014027"},{"annotations":[88423,88422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014384"},{"annotations":[88245],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032649"}]},"cv_name":"mondo","definition":"A congenital condition, usually due to genetic aberrations, that is characterized by a lack of hair growth on the head and/or body.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of pilosebaceous unit","termid":"MONDO:0002917"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00155":null,"SJAG_00624":null,"SJAG_01202":null,"SJAG_03469":null},"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:704.09","OMIMPS:605389","MEDGEN:6993","MESH:D007039","UMLS:C0020678","DOID:4535","SCTID:53602002","NCIT:C34720"],"termid":"MONDO:0003037","terms_by_termid":{"MONDO:0014027":null,"MONDO:0014384":null,"MONDO:0032649":null},"xrefs":{"Monarch":{"xref_id":"0003037"}}}


id: FYPO:0004070
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in a cell is too low to detect during a cellular response to copper ion starvation. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA absent from cell during vegetative growth","termid":"FYPO:0003161"},{"relation_name":"is_a","term_name":"decreased RNA level during cellular response to copper ion starvation during vegetative growth","termid":"FYPO:0003280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"RNA absent from cell during cellular response to copper ion starvation","synonyms":[{"name":"RNA absent from cell during cellular response to copper ion starvation during mitotic cell cycle","type":"related"},{"name":"RNA absent from cell during cellular response to copper ion starvation during vegetative growth","type":"exact"},{"name":"RNA absent from cell during cellular response to copper starvation","type":"exact"},{"name":"transcripts absent from cell during cellular response to copper ion starvation","type":"exact"},{"name":"undetectable RNA level during cellular response to copper ion starvation","type":"exact"}],"termid":"FYPO:0004070"}


id: GO:0002480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses a peptide antigen of exogenous origin on its cell surface in association with an MHC class I protein complex following intracellular transport via a pathway not requiring TAP (transporter associated with antigen processing). The peptide is typically a fragment of a larger exogenous protein which has been degraded within the cell. Class I here refers to classical class I molecules.","definition_xrefs":["GOC:add","PMID:16181335","PMID:15224093","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation of exogenous peptide antigen via MHC class I","termid":"GO:0042590"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous peptide antigen via MHC class I, TAP-independent","secondary_identifiers":["Reactome:R-HSA-1236977"],"synonyms":[{"name":"TAP-independent antigen processing and presentation of exogenous peptide antigen via MHC class I","type":"exact"},{"name":"TAP-independent exogenous peptide antigen processing and presentation via MHC class I","type":"exact"},{"name":"cross presentation","type":"broad"},{"name":"cross-presentation","type":"broad"},{"name":"exogenous peptide antigen processing and presentation via MHC class I, TAP-independent","type":"exact"}],"termid":"GO:0002480"}


id: MONDO:1011676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"endocrine system disorder, non-human animal","termid":"MONDO:1011317"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypoadrenocorticism, non-human animal","secondary_identifiers":["OMIA:000520"],"termid":"MONDO:1011676","xrefs":{"Monarch":{"xref_id":"1011676"}}}


id: FYPO:0007685
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell growth phenotype in which vegetative cell population growth is increased relative to normal under conditions of starvation for one or more nutrients.","definition_xrefs":["PMID:33574613","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased vegetative cell population growth","termid":"FYPO:0004557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0002058","FYPO:0001985","FYPO:0005447","FYPO:0000003","FYPO:0002057"],"is_obsolete":false,"name":"increased vegetative cell population growth during nutrient starvation","synonyms":[{"name":"fast vegetative cell population growth during nutrient starvation","type":"narrow"},{"name":"increased vegetative cell population growth during nutrient depletion","type":"exact"},{"name":"increased vegetative cell population growth during nutrient deprivation","type":"exact"},{"name":"increased vegetative cell population growth during nutrient limitation","type":"exact"},{"name":"increased vegetative cell population growth in response to nutrient starvation","type":"exact"},{"name":"resistant to nutrient starvation","type":"related"}],"termid":"FYPO:0007685"}


id: GO:0070728
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to L-leucine, 2-amino-4-methylpentanoic acid.","definition_xrefs":["GOC:BHF","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid binding","termid":"GO:0016597"},{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"cation binding","termid":"GO:0043169"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"L-leucine binding","synonyms":[{"name":"Leu binding","type":"broad"},{"name":"leucine binding","type":"broad"}],"termid":"GO:0070728"}


id: SO:0000833
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a transcript.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_region","termid":"SO:0001411"},{"relation_name":"part_of","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_region","synonyms":[{"name":"transcript region","type":"exact"}],"termid":"SO:0000833"}


