# terms

id: GO:0070658
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Differentiation of new neuromast sensory hair cells to replace those lost or destroyed by injury.","definition_xrefs":["PMID:19381250","GOC:dsf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuromast hair cell differentiation","termid":"GO:0048886"},{"relation_name":"is_a","term_name":"mechanoreceptor differentiation involved in mechanosensory epithelium regeneration","termid":"GO:0070656"},{"relation_name":"part_of","term_name":"neuromast regeneration","termid":"GO:0070657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuromast hair cell differentiation involved in neuromast regeneration","termid":"GO:0070658"}


id: MONDO:0013888
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any essential tremor in which the cause of the disease is a mutation in the FUS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential tremor","termid":"MONDO:0003233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tremor, hereditary essential, 4","secondary_identifiers":["DOID:0111431","MEDGEN:761337","OMIM:614782","UMLS:C3539195"],"synonyms":[{"name":"ETM4","type":"related"},{"name":"FUS essential tremor","type":"exact"},{"name":"essential tremor caused by mutation in FUS","type":"exact"},{"name":"essential tremor, hereditary, 4","type":"exact"},{"name":"tremor, hereditary essential, 4","type":"exact"},{"name":"tremor, hereditary essential, type 4","type":"exact"}],"termid":"MONDO:0013888","xrefs":{"Monarch":{"xref_id":"0013888"}}}


id: PR:O94330
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- arg6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94330"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amino-acid acetyltransferase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC725.14","synonyms":[{"name":"AGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"N-acetylglutamate synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"NAGS (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-arg6","type":"exact"},{"name":"arginine-requiring protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"glutamate N-acetyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O94330"}


id: GO:0098639
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any collagen binding that occurs as part of cell-matrix adhesion.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"collagen binding","termid":"GO:0005518"},{"relation_name":"is_a","term_name":"cell-matrix adhesion mediator activity","termid":"GO:0098634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0098631","GO:0003674"],"is_obsolete":false,"name":"collagen binding involved in cell-matrix adhesion","termid":"GO:0098639"}


id: GO:0016277
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + (myelin basic protein)-arginine = S-adenosyl-L-homocysteine + (myelin basic protein)-N(omega)-methyl-arginine.","definition_xrefs":["PMID:6177833"],"gene_count":0,"genotype_count":0,"name":"obsolete [myelin basic protein]-arginine N-methyltransferase activity (obsolete GO:0016277)","termid":"GO:0016277"}


id: PBO:0117244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial peptidyl tRNA hydrolase, stalled-ribosome rescue factor srRF1, Pth4","termid":"PBO:0117244"}


id: GO:0034881
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: citrazinate + H2O = cis-aconitamide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete citrazinate hydrolase activity (obsolete GO:0034881)","termid":"GO:0034881"}


id: PBO:0051469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable (I)-63 (pseudogene)","termid":"PBO:0051469"}


id: PBO:0077242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane and coiled-coil domains 3","termid":"PBO:0077242"}


id: MONDO:0007354
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma","termid":"MONDO:0001476"},{"relation_name":"is_a","term_name":"visual pathway disorder","termid":"MONDO:0001834"},{"relation_name":"is_a","term_name":"hereditary neurological disease","termid":"MONDO:0100545"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of optic nerve","secondary_identifiers":["Orphanet:98947","GARD:1438","icd11.foundation:592278969","MEDGEN:57832","OMIM:120430","HP:0000588","SCTID:17541006","ICD9:377.23","UMLS:C0155299","DOID:11975","MESH:C535970"],"synonyms":[{"name":"coloboma of optic disc","type":"related"},{"name":"coloboma of optic nerve (disease)","type":"exact"},{"name":"coloboma of optic papilla","type":"exact"},{"name":"congenital coloboma of the optic nerve","type":"narrow"},{"name":"morning glory Disc anomaly","type":"related"},{"name":"optic nerve coloboma","type":"exact"},{"name":"optic nerve head pits, bilateral congenital","type":"related"}],"termid":"MONDO:0007354","xrefs":{"Monarch":{"xref_id":"0007354"}}}


id: MONDO:0023671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"oculopharyngodistal myopathy","termid":"MONDO:0025193"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngodistal myopathy 3","secondary_identifiers":["DOID:0081299","MEDGEN:1794166","OMIM:619473","UMLS:C5561956"],"synonyms":[{"name":"OPDM3","type":"exact"}],"termid":"MONDO:0023671","xrefs":{"Monarch":{"xref_id":"0023671"}}}


id: FYECO:0000371
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which dimethyl sulfoxide (DMSO) was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ DMSO","synonyms":[{"name":"+ dimethyl sulfoxide","type":"exact"}],"termid":"FYECO:0000371"}


id: PBO:0071448
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L31 pseudogene 54","termid":"PBO:0071448"}


id: GO:1901060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of p-hydroxyphenyl lignin.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignin biosynthetic process","termid":"GO:0009809"},{"relation_name":"is_a","term_name":"p-hydroxyphenyl lignin metabolic process","termid":"GO:1901058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0019748"],"is_obsolete":false,"name":"p-hydroxyphenyl lignin biosynthetic process","synonyms":[{"name":"H-lignin biosynthetic process","type":"exact"},{"name":"p-hydroxyphenyl lignin anabolism","type":"exact"},{"name":"p-hydroxyphenyl lignin biosynthesis","type":"exact"},{"name":"p-hydroxyphenyl lignin formation","type":"exact"},{"name":"p-hydroxyphenyl lignin synthesis","type":"exact"}],"termid":"GO:1901060"}


id: MONDO:0012451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"eosinophilic esophagitis","termid":"MONDO:0005361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"esophagitis, eosinophilic, 1","secondary_identifiers":["MEDGEN:1634032","UMLS:C4551589","OMIM:610247"],"synonyms":[{"name":"EOE1","type":"exact"},{"name":"esophagitis, eosinophilic","type":"related"},{"name":"esophagitis, eosinophilic, 1","type":"exact"}],"termid":"MONDO:0012451","xrefs":{"Monarch":{"xref_id":"0012451"}}}


id: PBO:0088977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"40S ribosomal protein S19","termid":"PBO:0088977"}


id: PBO:0070444
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L3 pseudogene 1","termid":"PBO:0070444"}


id: PR:O14028
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29B12.05c gene.","definition_xrefs":["UniProtKB:O14028","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial N(5)-glutamine methyltransferase mtq1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29B12.05c","synonyms":[{"name":"Spom972h-SPAC29B12.05c","type":"exact"}],"termid":"PR:O14028"}


id: MOD:00255
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-histidine residue and an L-tyrosine residue by a carbon-nitrogen bond to form 3-(3'-L-histidyl)-L-tyrosine.","definition_xrefs":["PubMed:9144772","RESID:AA0250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-histidine residue","termid":"MOD:02048"},{"relation_name":"is_a","term_name":"crosslinked L-tyrosine residue","termid":"MOD:02058"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-(3'-L-histidyl)-L-tyrosine","synonyms":[{"name":"(2S,3R)-2-amino-3-(5-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-1-yl)-3-(4-hydroxyphenyl)propanoic acid","type":"exact"},{"name":"3-(3'-L-histidyl)-L-tyrosine","type":"exact"},{"name":"3-(N3'-histidyl)tyrosine","type":"exact"},{"name":"3-(pi-histidyl)tyrosine","type":"exact"},{"name":"3-(pros-histidyl)tyrosine","type":"exact"},{"name":"CROSSLNK 3'-histidyl-3-tyrosine (His-Tyr)","type":"exact"},{"name":"beta-(N(delta)-histidyl)tyrosine","type":"exact"},{"name":"beta-(N3'-histidyl)tyrosine","type":"exact"}],"termid":"MOD:00255"}


id: PBO:0050859
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ICMT divergent transcript","termid":"PBO:0050859"}


id: PBO:0058036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4257","termid":"PBO:0058036"}


id: PBO:0082045
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-methylisocitrate lyase of the mitochondrial matrix; functions in the methylcitrate cycle to catalyze the conversion of 2-methylisocitrate to succinate and pyruvate; ICL2 transcription is repressed by glucose and induced by ethanol","termid":"PBO:0082045"}


id: GO:0060505
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of epithelial cells that contribute to the radial growth of a lung bud.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell proliferation involved in lung morphogenesis","termid":"GO:0060502"},{"relation_name":"part_of","term_name":"bud dilation involved in lung branching","termid":"GO:0060503"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell proliferation involved in lung bud dilation","termid":"GO:0060505"}


id: PBO:0041687
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcitonin related polypeptide beta","termid":"PBO:0041687"}


id: PBO:0054376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1772","termid":"PBO:0054376"}


id: PATO:0000995
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000995 viscosity value (obsolete PATO:0000995)","termid":"PATO:0000995"}


id: PBO:0060438
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NACA pseudogene 7","termid":"PBO:0060438"}


id: MONDO:0958301
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A round cell sarcoma with EWSR1-non-ETS fusion that is characterized by the presence of FUS-NFATC2 gene fusion.","definition_xrefs":["DOID:0081410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"round cell sarcoma with EWSR1-non-ETS fusion","termid":"MONDO:0958160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"round cell sarcoma with FUS-NFATC2 gene fusion","secondary_identifiers":["MEDGEN:1791495","UMLS:C5555054"],"termid":"MONDO:0958301","xrefs":{"Monarch":{"xref_id":"0958301"}}}


id: MONDO:0017382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"clubfoot","termid":"MONDO:0007342"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial clubfoot due to 5q31 microdeletion","secondary_identifiers":["Orphanet:293144","MEDGEN:1826065","UMLS:C5679944","GARD:17336"],"synonyms":[{"name":"hereditary clubfoot due to 5q31 microdeletion","type":"exact"}],"termid":"MONDO:0017382","xrefs":{"Monarch":{"xref_id":"0017382"}}}


id: PBO:0042784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centrosomal protein 128","termid":"PBO:0042784"}


id: MONDO:0016445
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial anetoderma is an extremely rare genetic skin disease characterized by loss of elastin tissue leading to localized areas of flaccid skin and a family history of the disorder.","definition_xrefs":["Orphanet:228277"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial anetoderma","secondary_identifiers":["GARD:20585","UMLS:C4518793","MEDGEN:1387956","SCTID:733467001"],"synonyms":[{"name":"hereditary anetoderma","type":"exact"},{"name":"hereditary macular atrophy","type":"exact"}],"termid":"MONDO:0016445","xrefs":{"Monarch":{"xref_id":"0016445"}}}


id: PBO:0070612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7a pseudogene 80","termid":"PBO:0070612"}


id: MONDO:0957540
data:
  {"annotated_genes":["SJAG_03552"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88342],"is_not":false,"summary":null,"term":"MONDO:0957540"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type II","termid":"MONDO:0005501"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03552":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0024322"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"congenital disorder of glycosylation, type IIaa","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:620454","UMLS:C5830651","MEDGEN:1841287"],"termid":"MONDO:0957540","terms_by_termid":{"MONDO:0957540":null},"xrefs":{"Monarch":{"xref_id":"0957540"}}}


id: PBO:0046715
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EVA1C pseudogene 1","termid":"PBO:0046715"}


id: PBO:0057762
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 2052","termid":"PBO:0057762"}


id: PBO:0026756
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-resistance_to_hexavalent_chromium","termid":"PBO:0026756"}


id: GO:0180036
data:
  {"annotated_genes":["SJAG_02622"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120184],"is_not":false,"summary":null,"term":"GO:0180036"}]},"cv_name":"biological_process","definition":"A process that identifies and degrades defective or aberrant lncRNAs within the nucleus.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear RNA surveillance","termid":"GO:0071027"},{"relation_name":"is_a","term_name":"lncRNA catabolic process","termid":"GO:0110064"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nuclear lncRNA surveillance","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0180036","terms_by_termid":{"GO:0180036":null}}


id: PBO:0031227
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_chromatin_silencing_at_rDNA","termid":"PBO:0031227"}


id: PBO:0082993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cytosolic inhibitor of vacuolar proteinase B (PRB1); required for efficient vacuole inheritance; with thioredoxin forms protein complex LMA1, which assists in priming SNARE molecules and promotes vacuole fusion; protein abundance increases in response to DNA replication stress","termid":"PBO:0082993"}


id: GO:0052177
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving xylan within the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by symbiont of host xylan (obsolete GO:0052177)","termid":"GO:0052177"}


id: MONDO:0035775
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCNK-related neurodevelopmental disorder-severe intellectual disability-facial dysmorphism syndrome","secondary_identifiers":["Orphanet:600668","MEDGEN:1842919","GARD:22417","UMLS:C5681527"],"termid":"MONDO:0035775","xrefs":{"Monarch":{"xref_id":"0035775"}}}


id: PBO:0042532
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 5 regulatory subunit 2","termid":"PBO:0042532"}


id: PBO:0072712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RWD domain containing 4 pseudogene 1","termid":"PBO:0072712"}


id: GO:0048691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of axon extension involved in regeneration.","definition_xrefs":["GOC:lm","GOC:dph","GOC:jid","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of axon extension","termid":"GO:0045773"},{"relation_name":"is_a","term_name":"positive regulation of sprouting of injured axon","termid":"GO:0048687"},{"relation_name":"is_a","term_name":"regulation of axon extension involved in regeneration","termid":"GO:0048690"},{"relation_name":"positively_regulates","term_name":"axon extension involved in regeneration","termid":"GO:0048677"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of axon extension involved in regeneration","synonyms":[{"name":"activation of axon extension involved in regeneration","type":"narrow"},{"name":"stimulation of axon extension involved in regeneration","type":"narrow"},{"name":"up regulation of axon extension involved in regeneration","type":"exact"},{"name":"up-regulation of axon extension involved in regeneration","type":"exact"},{"name":"upregulation of axon extension involved in regeneration","type":"exact"}],"termid":"GO:0048691"}


id: PBO:0029940
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-dispersed_actin_cortical_patch_localization_during_mitotic_interphase","termid":"PBO:0029940"}


id: GO:0075117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont stops, prevents, or reduces the frequency, rate or extent of host transmembrane receptor-mediated cAMP signal transduction. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by symbiont of host transmembrane receptor-mediated cAMP signal transduction (obsolete GO:0075117)","synonyms":[{"name":"downregulation by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"exact"},{"name":"inhibition by symbiont of host transmembrane receptor-mediated cAMP signal transduction","type":"narrow"},{"name":"negative regulation by symbiont of host transmembrane receptor-mediated cAMP signaling","type":"exact"}],"termid":"GO:0075117"}


id: PATO:0001038
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001038 ratio (obsolete PATO:0001038)","termid":"PATO:0001038"}


id: PBO:0040851
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biogenesis of lysosomal organelles complex 1 subunit 5","termid":"PBO:0040851"}


id: PBO:0052518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch like family member 31","termid":"PBO:0052518"}


id: FYPO:0007838
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of peptide alpha-N-acetyltransferase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:34019809"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000654","FYPO:0000257"],"is_obsolete":false,"name":"normal peptide alpha-N-acetyltransferase activity","synonyms":[{"name":"normal NAT activity","type":"related"},{"name":"normal protein N-terminal acetyltransferase activity","type":"exact"}],"termid":"FYPO:0007838"}


id: PBO:0011478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methylglyoxyl reductase (NADPH-dependent) (predicted)","termid":"PBO:0011478"}


id: PBO:0050839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ITGB1 adjacent tumor promoting lncRNA","termid":"PBO:0050839"}


id: PBO:0066953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 255","termid":"PBO:0066953"}


id: PBO:0039111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aryl hydrocarbon receptor repressor","termid":"PBO:0039111"}


id: MONDO:0005734
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease of horses and donkeys caused by Trypanosoma equiperdum. The disease occurs in Africa, the Americas, and Asia.","definition_xrefs":["MESH:D004313"],"direct_ancestors":[{"relation_name":"is_a","term_name":"horse disease","termid":"MONDO:0024950"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dourine","secondary_identifiers":["SCTID:15566009"],"termid":"MONDO:0005734","xrefs":{"Monarch":{"xref_id":"0005734"}}}


id: MONDO:0006485
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A usually aggressive malignant neoplasm arising from the uterine corpus and less often the cervix. It is characterized by the presence of two components: a malignant epithelial component and a sarcomatous component. In the uterine corpus the epithelial component is usually glandular whereas in the cervix is usually non-glandular. Carcinosarcoma of the cervix, although it is aggressive, it may have a better prognosis compared to the uterine corpus carcinosarcoma.","definition_xrefs":["NCIT:C42700"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uterine cancer","termid":"MONDO:0002715"},{"relation_name":"is_a","term_name":"carcinosarcoma","termid":"MONDO:0002928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"uterine carcinosarcoma","secondary_identifiers":["EFO:1000613","ONCOTREE:UCS","DOID:6171","UMLS:C0280630","SCTID:702369008","MEDGEN:83678","MESH:D012192"],"synonyms":[{"name":"carcinosarcoma of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Mullerian) tumor of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Mullerian) tumour of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Müllerian) tumor of the uterus","type":"exact"},{"name":"malignant mixed mesodermal (Müllerian) tumour of the uterus","type":"exact"},{"name":"mixed mullerian sarcoma of uterus","type":"exact"},{"name":"uterine carcinosarcoma","type":"exact"},{"name":"uterine carcinosarcoma/uterine malignant mixed mullerian tumor","type":"related"},{"name":"uterine carcinosarcoma/uterine malignant mixed mullerian tumour","type":"related"},{"name":"uterine malignant mixed mesodermal (Mullerian) tumor","type":"exact"},{"name":"uterine malignant mixed mesodermal (Mullerian) tumour","type":"exact"},{"name":"uterine malignant mixed mesodermal (Müllerian) tumor","type":"exact"},{"name":"uterine malignant mixed mesodermal (Müllerian) tumour","type":"exact"},{"name":"uterus carcinosarcoma","type":"exact"}],"termid":"MONDO:0006485","xrefs":{"Monarch":{"xref_id":"0006485"}}}


id: MONDO:0009151
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ectodermal dysplasia syndrome characterized by hair, skin and teeth anomalies, facial dysmophism with cleft lip and palate, cutaneous syndactyly and, in some cases, intellectual disability.","definition_xrefs":["Orphanet:3253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005093"],"is_obsolete":false,"name":"cleft lip/palate-ectodermal dysplasia syndrome","secondary_identifiers":["Orphanet:320317","DOID:0060773","SCTID:716248001","UMLS:C2931488","MEDGEN:444067","GARD:375","NCIT:C122656","OMIM:225060"],"synonyms":[{"name":"Bustos Simosa pinto Cisternas syndrome","type":"related"},{"name":"CLEPD","type":"related"},{"name":"CLPED1","type":"related"},{"name":"ED4","type":"related"},{"name":"Zlotogora syndrome","type":"related"},{"name":"Zlotogora-Ogur syndrome","type":"exact"},{"name":"Zlotogora-Zilberman-Tenenbaum syndrome","type":"exact"},{"name":"autosomal recessive ectodermal dysplasia","type":"related"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 7","type":"related"},{"name":"cleft lip-palate-ectodermal dysplasia syndrome","type":"related"},{"name":"cleft lip/palate-ectodermal dysplasia syndrome","type":"exact"},{"name":"cleft lip/palate-syndactyly-pili torti","type":"related"},{"name":"cleft lip/palate-syndactyly-pili torti syndrome","type":"exact"},{"name":"ectodermal dysplasia margarita island type","type":"related"},{"name":"ectodermal dysplasia type 4","type":"related"},{"name":"ectodermal dysplasia, cleft lip and palate, intellectual disability, and syndactyly","type":"related"},{"name":"ectodermal dysplasia, cleft lip and palate, mental retardation, and syndactyly","type":"related"},{"name":"ectodermal dysplasia, margarita Island type","type":"related"},{"name":"ectodermal dysplasia, type 4","type":"related"},{"name":"margarita type of ectodermal dysplasia","type":"exact"},{"name":"orofacial cleft 7","type":"related"},{"name":"syndactyly-ectodermal dysplasia-cleft/lip palate","type":"exact"}],"termid":"MONDO:0009151","xrefs":{"Monarch":{"xref_id":"0009151"}}}


id: GO:0043227
data:
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id: GO:0102321
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id: MONDO:0007476
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id: PBO:0060790
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id: PBO:0065245
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id: PBO:0055088
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id: MONDO:0014890
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id: PBO:0031531
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id: SO:0001682
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id: MONDO:1012734
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id: GO:0032145
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id: MONDO:0030707
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id: GO:0042561
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id: MOD:00891
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id: FYPO:0002845
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell morphology phenotype in which a vegetative cell is inviable, is swollen, is elongated, and contains one or more septa. In a swollen cell, both length and diameter may be greater than normal, although the cell is only considered elongated if the length:diameter ratio is also greater than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable swollen elongated vegetative cell","termid":"FYPO:0002251"},{"relation_name":"is_a","term_name":"inviable swollen vegetative cell with abnormal cell shape","termid":"FYPO:0002415"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0001985","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable swollen elongated septated vegetative cell","synonyms":[{"name":"inviable enlarged elongated septated vegetative cell with enlarged nucleus","type":"related"},{"name":"inviable large elongated septated vegetative cell","type":"related"},{"name":"lethal; swollen elongated septated vegetative cell","type":"exact"}],"termid":"FYPO:0002845"}


id: GO:0072368
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of lipid transport by stopping, preventing, or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["GOC:mah","GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of lipid transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0072368)","synonyms":[{"name":"regulation of lipid transport by negative regulation of transcription from an RNA polymerase II promoter","type":"exact"}],"termid":"GO:0072368"}


id: PBO:0017652
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-aminoadipate transaminase (predicted)","termid":"PBO:0017652"}


id: MONDO:1011065
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal hypoplasia, bilateral that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal hypoplasia, bilateral, non-human animal","termid":"MONDO:1010266"},{"relation_name":"is_a","term_name":"renal disease, dog","termid":"MONDO:1012235"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal hypoplasia, bilateral, dog","secondary_identifiers":["OMIA:000858-9615"],"termid":"MONDO:1011065","xrefs":{"Monarch":{"xref_id":"1011065"}}}


id: PBO:0109010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein-coupled receptor 143 Y-linked pseudogene","termid":"PBO:0109010"}


id: PBO:0068132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 439","termid":"PBO:0068132"}


id: MONDO:0023581
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"cleft lip","termid":"MONDO:0004747"},{"relation_name":"is_a","term_name":"cleft palate","termid":"MONDO:0016064"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Kuster syndrome","secondary_identifiers":["UMLS:C2931741","GARD:3152","MESH:C538126","MEDGEN:419150"],"synonyms":[{"name":"cleft lip and palate, lower lip pits, and limb deficiency defects","type":"related"},{"name":"cleft lip palate lip pits limb deficiency","type":"related"}],"termid":"MONDO:0023581","xrefs":{"Monarch":{"xref_id":"0023581"}}}


id: PBO:0057626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1200","termid":"PBO:0057626"}


id: PBO:0074023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 15 pseudogene 1","termid":"PBO:0074023"}


id: MONDO:1010063
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital adrenal hypoplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypogonadism, non-human animal","termid":"MONDO:1010276"},{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"X-linked disease, non-human animal","termid":"MONDO:1012575"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital adrenal hypoplasia, non-human animal","secondary_identifiers":["OMIA:002060"],"termid":"MONDO:1010063","xrefs":{"Monarch":{"xref_id":"1010063"}}}


id: PBO:0042564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase inhibitor 1A","termid":"PBO:0042564"}


id: MONDO:0011977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The 8q22.1 microdeletion syndrome or Nablus mask-like facial syndrome is a rare microdeletion syndrome associated with a distinct facial appearance.","definition_xrefs":["Orphanet:178303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 8","termid":"MONDO:0016907"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"8q22.1 microdeletion syndrome","secondary_identifiers":["GARD:4722","MEDGEN:334165","OMIM:608156","UMLS:C1842464","MESH:C536110","SCTID:719664004"],"synonyms":[{"name":"NABLUS mask-like facial syndrome","type":"related"},{"name":"NMLFS","type":"related"},{"name":"Nablus mask-like facial syndrome","type":"exact"},{"name":"chromosome 8Q22.1 deletion syndrome","type":"related"},{"name":"monosomy 8q22.1","type":"exact"}],"termid":"MONDO:0011977","xrefs":{"Monarch":{"xref_id":"0011977"}}}


id: MONDO:0858989
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete autosomal recessive spastic paraplegia type 84 (obsolete MONDO:0858989)","termid":"MONDO:0858989","xrefs":{"Monarch":{"xref_id":"0858989"}}}


id: PBO:0058765
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6889","termid":"PBO:0058765"}


id: GO:0033799
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + myricetin = S-adenosyl-L-homocysteine + laricitrin.","definition_xrefs":["RHEA:25629"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016741","GO:0016740"],"is_obsolete":false,"name":"myricetin 3'-O-methyltransferase activity","secondary_identifiers":["GO:0102437","KEGG_REACTION:R06815","MetaCyc:RXN-8451"],"synonyms":[{"name":"CrCOMT2","type":"related"},{"name":"S-adenosyl-L-methionine:myricetin O-methyltransferase activity","type":"related"},{"name":"flavonoid 3',5'-O-dimethyltransferase activity","type":"related"},{"name":"myricetin 3-O-methyltransferase activity","type":"related"}],"termid":"GO:0033799"}


id: MONDO:0044750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Arenaviridae infectious disease","termid":"MONDO:0005650"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lassa virus infectious disease","secondary_identifiers":["SCTID:721779001","UMLS:C1617072","MEDGEN:923253"],"synonyms":[{"name":"Lassa virus infection","type":"exact"},{"name":"infection caused by Lassa virus","type":"exact"}],"termid":"MONDO:0044750","xrefs":{"Monarch":{"xref_id":"0044750"}}}


id: PBO:0025490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APC ubiquitin conjugating enzyme E2 Ubc4/UbcP1","termid":"PBO:0025490"}


id: GO:0031664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of signaling in response to detection of lipopolysaccharide.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to biotic stimulus","termid":"GO:0002831"},{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"lipopolysaccharide-mediated signaling pathway","termid":"GO:0031663"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of lipopolysaccharide-mediated signaling pathway","synonyms":[{"name":"regulation of LPS-mediated signaling pathway","type":"exact"},{"name":"regulation of lipopolysaccharide-mediated signalling pathway","type":"exact"}],"termid":"GO:0031664"}


id: GO:0102988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (9Z,12Z)-hexadecadienoyl-CoA + O2 + a reduced electron acceptor = 9,12,15-cis-hexadecatrienoyl-CoA + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["EC:1.14.19.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA desaturase activity","termid":"GO:0016215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"acyl-CoA 15-desaturase activity","secondary_identifiers":["MetaCyc:RXN-9617","RHEA:46232"],"synonyms":[{"name":"9,12-cis-hexadecadienoic acid delta 15 desaturase activity","type":"exact"}],"termid":"GO:0102988"}


id: SO:0001425
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A read produced by ligation based sequencing technologies.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"read","termid":"SO:0000150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligation_based_read","synonyms":[{"name":"ligation based read","type":"related"}],"termid":"SO:0001425"}


id: MONDO:0000232
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A spotted fever that has material basis in Rickettsia honei, which is transmitted by cayenne ticks (Amblyomma cajennense). The infection has symptom mild spotted fever, has symptom eschar and has symptom adenopathy.","definition_xrefs":["DOID:0050047"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spotted fever","termid":"MONDO:0001195"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flinders island spotted fever","secondary_identifiers":["UMLS:C4505102","MEDGEN:1375989"],"synonyms":[{"name":"FISF","type":"related"},{"name":"Thai tick typhus","type":"exact"}],"termid":"MONDO:0000232","xrefs":{"Monarch":{"xref_id":"0000232"}}}


id: MONDO:0000156
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"trigonocephaly","secondary_identifiers":["icd11.foundation:20816218","UMLS:C0265535","SCTID:28740008","MEDGEN:82713"],"synonyms":[{"name":"trigonocephalia","type":"related"},{"name":"trigonocephalus","type":"related"},{"name":"trigonocephaly","type":"exact"},{"name":"trigonocephaly, isolated","type":"related"}],"termid":"MONDO:0000156","xrefs":{"Monarch":{"xref_id":"0000156"}}}


id: PBO:0002176
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"accumulation and persistence of Swi5 foci in rhp54 delta cells","termid":"PBO:0002176"}


id: GO:0019797
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: procollagen L-proline + 2-oxoglutarate + O2 = procollagen trans-3-hydroxy-L-proline + succinate + CO2.","definition_xrefs":["EC:1.14.11.7","RHEA:22872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"procollagen-proline dioxygenase activity","termid":"GO:0019798"},{"relation_name":"is_a","term_name":"peptidyl-proline 3-dioxygenase activity","termid":"GO:0031544"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"procollagen-proline 3-dioxygenase activity","secondary_identifiers":["Reactome:R-HSA-1980233","KEGG_REACTION:R03218","MetaCyc:PROCOLLAGEN-PROLINE-3-DIOXYGENASE-RXN"],"synonyms":[{"name":"procollagen-L-proline,2-oxoglutarate:oxygen oxidoreductase (3-hydroxylating) activity","type":"related"},{"name":"procollagen-proline,2-oxoglutarate 3-dioxygenase activity","type":"related"},{"name":"proline,2-oxoglutarate 3-dioxygenase activity","type":"related"},{"name":"prolyl 3-hydroxylase activity","type":"broad"},{"name":"prolyl-4-hydroxyprolyl-glycyl-peptide, 2-oxoglutarate: oxygen oxidoreductase, 3-hydroxylating activity","type":"related"},{"name":"protocollagen proline 3-hydroxylase activity","type":"related"}],"termid":"GO:0019797"}


id: MONDO:0015858
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non-malformative breast disease (obsolete MONDO:0015858)","secondary_identifiers":["Orphanet:180202"],"termid":"MONDO:0015858","xrefs":{"Monarch":{"xref_id":"0015858"}}}


id: PBO:0047036
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 99 member A","termid":"PBO:0047036"}


id: GO:2000123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of stomatal complex development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of post-embryonic development","termid":"GO:0048582"},{"relation_name":"is_a","term_name":"regulation of stomatal complex development","termid":"GO:2000038"},{"relation_name":"positively_regulates","term_name":"stomatal complex development","termid":"GO:0010374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of stomatal complex development","termid":"GO:2000123"}


id: PBO:0050588
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock factor binding protein 1","termid":"PBO:0050588"}


id: GO:0060516
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size of the prostatic bud as it forms.","definition_xrefs":["PMID:18977204","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branch elongation of an epithelium","termid":"GO:0060602"},{"relation_name":"is_a","term_name":"prostate gland morphogenetic growth","termid":"GO:0060737"},{"relation_name":"is_a","term_name":"prostate gland epithelium morphogenesis","termid":"GO:0060740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary prostatic bud elongation","synonyms":[{"name":"prostate bud elongation","type":"broad"},{"name":"prostate bud elongation involved in prostate morphogenesis","type":"exact"}],"termid":"GO:0060516"}


id: GO:0015846
data:
  {"annotated_genes":["SJAG_02125","SJAG_03817","SJAG_02059","SJAG_02344","SJAG_02060","SJAG_04134","SJAG_04469"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104618],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902047"},{"annotations":[72524],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015847"},{"annotations":[108423],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902267"},{"annotations":[62641,70678,58290,70775,62665],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903711"},{"annotations":[70677,62640,70774,62664],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903710"}]},"cv_name":"biological_process","definition":"The directed movement of polyamines, organic compounds containing two or more amino groups, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":7,"genes_by_uniquename":{"SJAG_02059":null,"SJAG_02060":null,"SJAG_02125":null,"SJAG_02344":null,"SJAG_03817":null,"SJAG_04134":null,"SJAG_04469":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"polyamine transport","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null,"GO_REF:0000117":null},"termid":"GO:0015846","terms_by_termid":{"GO:0015847":null,"GO:1902047":null,"GO:1902267":null,"GO:1903710":null,"GO:1903711":null}}


id: PR:G2TRK6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC9G1.14 gene.","definition_xrefs":["UniProtKB:G2TRK6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C9G1.14 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC9G1.14","synonyms":[{"name":"Spom972h-SPAC9G1.14","type":"exact"}],"termid":"PR:G2TRK6"}


id: GO:0009185
data:
  {"annotated_genes":["SJAG_03828","SJAG_04665","SJAG_00461","SJAG_00605","SJAG_04334","SJAG_00779","SJAG_00885","SJAG_04849","SJAG_02038","SJAG_02107","SJAG_02135","SJAG_06621","SJAG_02796","SJAG_03676","SJAG_04192","SJAG_03903","SJAG_02369","SJAG_01310","SJAG_05314","SJAG_06622","SJAG_00839","SJAG_04495","SJAG_03373","SJAG_00027","SJAG_02785","SJAG_02945","SJAG_02009","SJAG_04048","SJAG_03977","SJAG_03660","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[118409,74386,100004,107480,111436,111439,111442,107481,96536,107479,111441,107850,111440,111438,100275,111437,105655,107849,79788,105398],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[82363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046705"},{"annotations":[94446,109288],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046704"},{"annotations":[65594],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046710"},{"annotations":[90617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[78092,75038],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[71970],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[115369],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009191"},{"annotations":[82362],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006225"},{"annotations":[78404],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006256"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving a ribonucleoside diphosphate, a compound consisting of a nucleobase linked to a ribose sugar esterified with diphosphate on the sugar.","definition_xrefs":["ISBN:0198506732","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside diphosphate metabolic process","termid":"GO:0009132"}],"gene_count":31,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00461":null,"SJAG_00605":null,"SJAG_00685":null,"SJAG_00779":null,"SJAG_00839":null,"SJAG_00885":null,"SJAG_01310":null,"SJAG_02009":null,"SJAG_02038":null,"SJAG_02107":null,"SJAG_02135":null,"SJAG_02369":null,"SJAG_02785":null,"SJAG_02796":null,"SJAG_02945":null,"SJAG_03373":null,"SJAG_03660":null,"SJAG_03676":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03977":null,"SJAG_04048":null,"SJAG_04192":null,"SJAG_04334":null,"SJAG_04495":null,"SJAG_04665":null,"SJAG_04849":null,"SJAG_05314":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"ribonucleoside diphosphate metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"ribonucleoside diphosphate metabolism","type":"exact"}],"termid":"GO:0009185","terms_by_termid":{"GO:0006110":null,"GO:0006172":null,"GO:0006225":null,"GO:0006256":null,"GO:0009191":null,"GO:0045820":null,"GO:0046704":null,"GO:0046705":null,"GO:0046710":null,"GO:0061613":null,"GO:0061621":null}}


id: GO:0044402
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism within a multispecies community gains an advantage in growth or survival over another organism of a different species in that community.","definition_xrefs":["GOC:cc"],"gene_count":0,"genotype_count":0,"name":"obsolete competition with other organism (obsolete GO:0044402)","synonyms":[{"name":"competition with another organism","type":"exact"},{"name":"interspecies competition","type":"broad"}],"termid":"GO:0044402"}


id: GO:0016517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-12 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-12 receptor activity","synonyms":[{"name":"IL-12 receptor activity","type":"exact"},{"name":"IL-12R","type":"exact"}],"termid":"GO:0016517"}


id: GO:0051425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a phosphotyrosine-binding (PTB) Binding to a phosphotyrosine-bindin domain.","definition_xrefs":["Pfam:PF02174","PMID:15924411"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein domain specific binding","termid":"GO:0019904"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"PTB domain binding","synonyms":[{"name":"PID binding","type":"broad"},{"name":"phosphotyrosine-interacting domain binding","type":"exact"}],"termid":"GO:0051425"}


id: FYPO:0006203
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dATP measured in the cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular dNTP level","termid":"FYPO:0006401"},{"relation_name":"is_a","term_name":"decreased cellular pentose phosphate level","termid":"FYPO:0006705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular dATP level","synonyms":[{"name":"decreased cellular dATP level during mitotic cell cycle","type":"related"},{"name":"decreased cellular dATP level during vegetative growth","type":"exact"},{"name":"reduced cellular dATP level","type":"exact"}],"termid":"FYPO:0006203"}


id: MONDO:0015971
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic adrenal disease (obsolete MONDO:0015971)","secondary_identifiers":["Orphanet:183637"],"termid":"MONDO:0015971","xrefs":{"Monarch":{"xref_id":"0015971"}}}


id: SO:0000472
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A set of regions which overlap with minimal polymorphism to form a linear sequence.","definition_xrefs":["SO:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_assembly","termid":"SO:0000353"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tiling_path","synonyms":[{"name":"tiling path","type":"exact"}],"termid":"SO:0000472"}


id: PR:Q9USG8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug190 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9USG8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 190 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.06","synonyms":[{"name":"Spom972h-mug190","type":"exact"}],"termid":"PR:Q9USG8"}


id: SO:0000583
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The region of a transcript that will be edited.","direct_ancestors":[{"relation_name":"is_a","term_name":"edited_transcript_feature","termid":"SO:0000579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre_edited_region","synonyms":[{"name":"pre edited region","type":"exact"},{"name":"pre-edited region","type":"exact"}],"termid":"SO:0000583"}


id: PBO:0043499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"contactin 6","termid":"PBO:0043499"}


id: PBO:0089119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"external mitochondrial NADH dehydrogenase (ubiquinone) Nde1/Nde2","termid":"PBO:0089119"}


id: PBO:0027827
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_negative_regulation_of_transcription_during_G0_phase","termid":"PBO:0027827"}


id: PBO:0083874
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein subunit of SCF ubiquitin ligase complex; substrate-specific adaptor subunit that recruits substrates to a core ubiquitination complex","termid":"PBO:0083874"}


id: PBO:0038949
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adipogenin","termid":"PBO:0038949"}


id: PBO:0078560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 48","termid":"PBO:0078560"}


id: FYECO:0000413
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which valproic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ valproic acid","synonyms":[{"name":"valproic acid added","type":"exact"}],"termid":"FYECO:0000413"}


id: PBO:0040878
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bone morphogenetic protein 3","termid":"PBO:0040878"}


id: MOD:01508
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6-hydrogen atom of a lysine residue with the Applied Biosystems iTRAQ4plex-117 reporter+balance group.","definition_xrefs":["Unimod:889#K","OMSSA:212","Unimod:214#K","OMSSA:177"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent acylated residue","termid":"MOD:01506"},{"relation_name":"is_a","term_name":"iTRAQ4plex reporter+balance reagent N-acylated residue","termid":"MOD:01709"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"iTRAQ4plex-117, mTRAQ heavy, reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"Applied Biosystems mTRAQ(TM) reagent","type":"related"},{"name":"Representative mass and accurate mass for 116 & 117","type":"related"},{"name":"iTRAQ","type":"related"},{"name":"iTRAQ117K","type":"exact"},{"name":"iTRAQ4plex","type":"related"},{"name":"mTRAQ heavy","type":"related"},{"name":"mTRAQ heavy on K","type":"exact"}],"termid":"MOD:01508"}


id: PBO:0074209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 2","termid":"PBO:0074209"}


id: GO:0018013
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The methylation of the N-terminal glycine of proteins to form the derivative N-methylglycine.","definition_xrefs":["RESID:AA0063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal protein amino acid methylation","termid":"GO:0006480"},{"relation_name":"is_a","term_name":"peptidyl-glycine modification","termid":"GO:0018201"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-glycine methylation","termid":"GO:0018013"}


id: GO:0051182
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a coenzyme into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. A coenzyme is any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete coenzyme transport (obsolete GO:0051182)","termid":"GO:0051182"}


id: MONDO:0000958
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Neuroretinitis is an inflammation of the neural retina and optic nerve. Pathology: Direct invasion or autoimmune activation against the optic nerve may cause optic nerve vascular inflammation with secondary inflammation and edema in the nerve fiber layer of the retina.","direct_ancestors":[{"relation_name":"is_a","term_name":"neuritis","termid":"MONDO:0002122"},{"relation_name":"is_a","term_name":"retinal nerve fiber layer disorder","termid":"MONDO:0003579"},{"relation_name":"is_a","term_name":"optic papillitis","termid":"MONDO:0006879"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005244","MONDO:0005328"],"is_obsolete":false,"name":"neuroretinitis","secondary_identifiers":["ICD9:363.05","icd11.foundation:418437487","MESH:D012173","DOID:10176","MEDGEN:57826","UMLS:C0154874"],"synonyms":[{"name":"Juxtapapillary focal retinitis and retinochoroiditis","type":"narrow"},{"name":"focal retinitis and retinochoroiditis, juxtapapillary","type":"narrow"},{"name":"papilloretinitis","type":"narrow"}],"termid":"MONDO:0000958","xrefs":{"Monarch":{"xref_id":"0000958"}}}


id: SO:0000054
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of chromosome variation where the chromosome complement is not an exact multiple of the haploid number.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome_number_variation","termid":"SO:1000182"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid","secondary_identifiers":["http://en.wikipedia.org/wiki/Aneuploid"],"termid":"SO:0000054"}


id: PBO:0014287
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence orphan, predicted GPI anchored","termid":"PBO:0014287"}


id: MONDO:0010378
data:
  {"annotated_genes":["SJAG_02016"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89186],"is_not":false,"summary":null,"term":"MONDO:0010378"}]},"cv_name":"mondo","definition":"This syndrome is characterized by the association of an axonal sensory and autonomic neuropathy with hearing loss.","definition_xrefs":["Orphanet:139583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary sensory and autonomic neuropathy","termid":"MONDO:0015364"},{"relation_name":"is_a","term_name":"X-linked nonsyndromic hearing loss","termid":"MONDO:0019586"},{"relation_name":"is_a","term_name":"auditory neuropathy","termid":"MONDO:0021944"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02016":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0019497"}],"interesting_parent_ids":["MONDO:0019497","MONDO:0005244"],"is_obsolete":false,"name":"X-linked hereditary sensory and autonomic neuropathy with hearing loss","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0111741","MESH:C564472","SCTID:719838008","GARD:12731","OMIM:300614","UMLS:C4304400","MEDGEN:930069"],"synonyms":[{"name":"DFNX5","type":"related"},{"name":"X-linked HSAN with deafness","type":"narrow"},{"name":"X-linked auditory neuropathy with peripheral sensory neuropathy type 1","type":"exact"},{"name":"X-linked hereditary sensory and autonomic neuropathy with deafness","type":"narrow"},{"name":"X-linked hereditary sensory and autonomic neuropathy with hearing loss","type":"exact"},{"name":"auditory neuropathy, X-linked, 1, with peripheral sensory neuropathy","type":"related"},{"name":"deafness, X-linked 5","type":"related"},{"name":"deafness, X-linked 5, X-linked recessive","type":"narrow"}],"termid":"MONDO:0010378","terms_by_termid":{"MONDO:0010378":null},"xrefs":{"Monarch":{"xref_id":"0010378"}}}


id: GO:0030582
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a reproductive fruiting body over time, from its formation to the mature structure. A reproductive fruiting body is a multicellular reproductive structure that contains spores.","definition_xrefs":["GOC:mah","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore-bearing structure development","termid":"GO:0075259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"reproductive fruiting body development","synonyms":[{"name":"fruiting body formation","type":"exact"}],"termid":"GO:0030582"}


id: MONDO:0009091
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Non-acquired combined pituitary hormone deficiency-sensorineural hearing loss-spine abnormalities syndrome is a rare, genetic, non-acquired, combined pituitary hormone deficiency disorder characterized by panhypopituitarism (with or without ACTH deficiency) associated with spine abnormalities, including frequent rigid cervical spine and short neck with limited rotation, and variable degrees of sensorineural hearing loss. The anterior pituitary gland is usually abnormal (typically hypoplastic) and rarely a mild developmental delay or intellectual disability may be associated.","definition_xrefs":["Orphanet:231720"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined pituitary hormone deficiencies, genetic form","termid":"MONDO:0013099"},{"relation_name":"is_a","term_name":"non-acquired combined pituitary hormone deficiency","termid":"MONDO:0018762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"non-acquired combined pituitary hormone deficiency with spine abnormalities","secondary_identifiers":["MESH:C536710","OMIM:221750","DOID:0061021","GARD:10603","UMLS:C3489787","MEDGEN:483740"],"synonyms":[{"name":"CPHD3","type":"related"},{"name":"Deafness, sensorineural with pituitary dwarfism","type":"related"},{"name":"Pituitary hormone deficiency, combined with rigid cervical spine","type":"related"},{"name":"Winkelmann-Bethge-Pfeiffer syndrome","type":"related"},{"name":"deafness, sensorineural, with pituitary dwarfism","type":"related"},{"name":"non-acquired combined pituitary hormone deficiency with spine abnormalities","type":"exact"},{"name":"non-acquired combined pituitary hormone deficiency-deafness-rigid cervical spine syndrome","type":"exact"},{"name":"non-acquired combined pituitary hormone deficiency-sensorineural hearing loss-spine abnormalities syndrome","type":"related"},{"name":"pituitary hormone deficiency, combined, 3","type":"related"},{"name":"pituitary hormone deficiency, combined, type 3","type":"exact"},{"name":"pituitary hormone deficiency, combined, with rigid cervical spine","type":"related"}],"termid":"MONDO:0009091","xrefs":{"Monarch":{"xref_id":"0009091"}}}


id: MONDO:0006665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrophic gastritis that is persistent and long-standing.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic gastritis","termid":"MONDO:0005001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"chronic atrophic gastritis","secondary_identifiers":["DOID:8929","ICD9:535.10","NCIT:C7405","EFO:1000826","ICD10CM:K29.4","ICD9:535.1","ICD9:535.11","MedDRA:10003685","MEDGEN:42157","MESH:D005757","SCTID:84568007","UMLS:C0017154"],"synonyms":[{"name":"Gastritides, atrophic","type":"exact"},{"name":"atrophic Gastritides","type":"exact"},{"name":"atrophic gastritis","type":"exact"},{"name":"gastric atrophy","type":"exact"}],"termid":"MONDO:0006665","xrefs":{"Monarch":{"xref_id":"0006665"}}}


id: GO:0031448
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of fast-twitch skeletal muscle contraction.","definition_xrefs":["GOC:mah","GOC:mtg_muscle","GOC:tb","GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of fast-twitch skeletal muscle fiber contraction","termid":"GO:0031446"},{"relation_name":"is_a","term_name":"positive regulation of striated muscle contraction","termid":"GO:0045989"},{"relation_name":"positively_regulates","term_name":"fast-twitch skeletal muscle fiber contraction","termid":"GO:0031443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of fast-twitch skeletal muscle fiber contraction","synonyms":[{"name":"activation of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"positive regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"stimulation of fast-twitch skeletal muscle contraction","type":"narrow"},{"name":"up regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"up-regulation of fast-twitch skeletal muscle contraction","type":"exact"},{"name":"upregulation of fast-twitch skeletal muscle contraction","type":"exact"}],"termid":"GO:0031448"}


id: GO:0033403
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a UUA codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0003723","GO:0060090"],"is_obsolete":false,"name":"UUA codon-amino acid adaptor activity","synonyms":[{"name":"TTA codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033403"}


id: GO:0097103
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process involved in the specification of identity of an endothelial stalk cell. Once specification has taken place, a cell will be committed to differentiate down a specific pathway if left in its normal environment. An endothelial stalk cell is a specialized endothelial cell which follows behind the tip cell of an angiogenic sprout.","definition_xrefs":["PMID:21521739","CL:0002671","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel endothelial cell fate specification","termid":"GO:0097101"},{"relation_name":"part_of","term_name":"sprouting angiogenesis","termid":"GO:0002040"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endothelial stalk cell fate specification","synonyms":[{"name":"angiogenic stalk cell fate specification","type":"exact"}],"termid":"GO:0097103"}


id: PATO:0002266
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape that inheres in a 3 dimensional entity.","definition_xrefs":["PATOC:OREGON"],"direct_ancestors":[{"relation_name":"is_a","term_name":"shape","termid":"PATO:0000052"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-D shape","termid":"PATO:0002266"}


id: PBO:0065354
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PTPN13 like Y-linked pseudogene 4","termid":"PBO:0065354"}


id: PBO:0063314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostate cancer associated HIP1 interacting lncRNA","termid":"PBO:0063314"}


id: PBO:0045649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double homeobox A pseudogene 7","termid":"PBO:0045649"}


id: PBO:0051414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin lambda variable 1-62 (pseudogene)","termid":"PBO:0051414"}


id: PBO:0053497
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 475","termid":"PBO:0053497"}


id: SO:0001802
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript processing variant whereby polyadenylation of the encoded transcript is increased with respect to the reference.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyadenylation_variant","termid":"SO:0001545"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_polyadenylation_variant","synonyms":[{"name":"increased polyadenylation variant","type":"exact"}],"termid":"SO:0001802"}


id: PBO:0047317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 1 pseudogene 1","termid":"PBO:0047317"}


id: PATO:0002497
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An orientation quality inhering in a bearer by virtue of the bearer having a position that is directed laterally.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orientation","termid":"PATO:0000133"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lateral orientation","synonyms":[{"name":"laterally directed","type":"exact"}],"termid":"PATO:0002497"}


id: PBO:0036514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidinol-phosphatase(predicted)","termid":"PBO:0036514"}


id: FYPO:0002661
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of trehalose 6-phosphate measured in a cell is lower than normal when the cell is subject to heat shock.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular trehalose 6-phosphate level","termid":"FYPO:0002660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased cellular trehalose 6-phosphate level during heat shock","synonyms":[{"name":"decreased cellular trehalose 6-phosphate level during heat shock during mitotic cell cycle","type":"related"},{"name":"decreased cellular trehalose 6-phosphate level during vegetative growth and during heat shock","type":"exact"},{"name":"decreased cellular trehalose-6P level during heat shock","type":"exact"},{"name":"decreased trehalose 6-phosphate accumulation during heat shock","type":"related"},{"name":"reduced cellular trehalose 6-phosphate level during heat shock","type":"exact"}],"termid":"FYPO:0002661"}


id: PBO:0011445
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase epsilon interactor Dpb3-like","termid":"PBO:0011445"}


id: MONDO:0005489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A learning disorder characterized by an impairment in processing written words. Reading difficulties can include distortions, omissions or substitutions of characters. Oral and silent reading difficulties can include faulty and slow comprehension.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reading disorder","termid":"MONDO:0001697"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyslexia","secondary_identifiers":["HP:0010522","DOID:4428","MEDGEN:96906","icd11.foundation:1843588689","UMLS:C0476254","NCIT:C96410","EFO:0005424","MESH:D004410"],"synonyms":[{"name":"dyslexia","type":"exact"},{"name":"dyslexia (disease)","type":"exact"}],"termid":"MONDO:0005489","xrefs":{"Monarch":{"xref_id":"0005489"}}}


id: MONDO:0010783
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Alzheimer disease, susceptibility to, mitochondrial (obsolete MONDO:0010783)","termid":"MONDO:0010783","xrefs":{"Monarch":{"xref_id":"0010783"}}}


id: PBO:0029369
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_actomyosin_contractile_ring","termid":"PBO:0029369"}


id: GO:0102569
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: FR-900098 + 2-oxoglutarate(2-) + O2 = FR-33289 + succinate(2-) + carbon dioxide.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete FR-33289 synthase activity (obsolete GO:0102569)","termid":"GO:0102569"}


id: MONDO:0006767
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dilatation of the vessels in the antrum of the stomach. It is associated with portal hypertension, scleroderma, and chronic renal failure. It may cause gastric bleeding.","definition_xrefs":["NCIT:C84724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"capillary disorder","termid":"MONDO:0001574"},{"relation_name":"is_a","term_name":"vascular ectasia","termid":"MONDO:0021658"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastric antral vascular ectasia","secondary_identifiers":["EFO:1000945","MESH:D020252","MedDRA:10051585","MEDGEN:82753","UMLS:C0267211","DOID:2493","SCTID:43935004"],"synonyms":[{"name":"GAVE","type":"exact"},{"name":"watermelon stomach","type":"exact"}],"termid":"MONDO:0006767","xrefs":{"Monarch":{"xref_id":"0006767"}}}


id: PR:P40977
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A 1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase delta-4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01994","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1-phosphatidylinositol 4,5-bisphosphate phosphodiesterase 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22F8.11","secondary_identifiers":["UniProtKB:P40977"],"synonyms":[{"name":"PLC-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-PLCD4","type":"exact"},{"name":"phospholipase C-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P40977"}


id: MONDO:0018805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cystic dilatation of the hepatic duct or bile duct.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"liver disorder","termid":"MONDO:0005154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"bile duct cyst","secondary_identifiers":["OMIM:603003","ICD9:576.8","Orphanet:480501","GARD:21973","ICD10CM:Q44.4","icd11.foundation:819487805","DOID:899","MESH:D015529","ICD9:751.69","MEDGEN:3037","SCTID:397868007","UMLS:C0008340"],"synonyms":[{"name":"bile duct cysts","type":"exact"},{"name":"choledochal cyst","type":"exact"},{"name":"choledochal cysts","type":"exact"},{"name":"choledochocele","type":"exact"},{"name":"congenital choledochal cyst","type":"exact"},{"name":"congenital cystic dilatation of the biliary tract","type":"exact"}],"termid":"MONDO:0018805","xrefs":{"Monarch":{"xref_id":"0018805"}}}


id: GO:1902342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of xylitol out of a cell or organelle.","definition_xrefs":["PMID:23475614","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete xylitol export (obsolete GO:1902342)","termid":"GO:1902342"}


id: MONDO:1010768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitiligo, non-human animal","termid":"MONDO:1010136"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, cattle","secondary_identifiers":["OMIA:001055-9913"],"termid":"MONDO:1010768","xrefs":{"Monarch":{"xref_id":"1010768"}}}


id: FYECO:0000382
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in defined medium containing sucrose, salts and water. May be supplemented with a set of amino acids as per the auxotrophic requirements of the strain.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fructose MM","synonyms":[{"name":"fructose minimal medium","type":"exact"}],"termid":"FYECO:0000382"}


id: PBO:0074682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63D","termid":"PBO:0074682"}


id: PR:Q10358
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein RER1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR10743:SF0","OMA:SCHPO02094"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein rer1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC22E12.05c","secondary_identifiers":["UniProtKB:Q10358"],"synonyms":[{"name":"Spom972h-RER1","type":"exact"},{"name":"retention of ER proteins 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10358"}


id: MONDO:0011292
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dermatitis, atopic (obsolete MONDO:0011292)","termid":"MONDO:0011292","xrefs":{"Monarch":{"xref_id":"0011292"}}}


id: FYPO:0007492
data:
  {"alleles_by_uniquename":{"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in the cell wall differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04697":null},"genotype_count":1,"genotypes_by_uniquename":{"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered level of substance in cell wall","references_by_uniquename":{"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697"],"single_locus_genotype_uniquenames":["gms1delta"],"synonyms":[{"name":"abnormal level of substance in cell wall","type":"exact"}],"termid":"FYPO:0007492","terms_by_termid":{"FYPO:0003727":null,"FYPO_EXT:0000001":null}}


id: PBO:0081428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 282","termid":"PBO:0081428"}


id: GO:0031458
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + H2O + a betaine(out) = ADP + phosphate + a betaine(in).","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transmembrane transporter activity","termid":"GO:0015101"},{"relation_name":"is_a","term_name":"ABC-type transporter activity","termid":"GO:0140359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ABC-type betaine transporter activity","synonyms":[{"name":"ABC-type betaine transmembrane transporter activity","type":"exact"},{"name":"ATP-dependent betaine transporter activity","type":"exact"},{"name":"ATPase-coupled betaine transporter activity","type":"related"},{"name":"betaine ABC transporter","type":"narrow"},{"name":"betaine-transporting ATPase activity","type":"exact"}],"termid":"GO:0031458"}


id: GO:0005287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of basic amino acids from one side of a membrane to the other. Acidic amino acids have a pH above 7. In high-affinity transport the transporter is able to bind the solute even if it is only present at very low concentrations.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"basic amino acid transmembrane transporter activity","termid":"GO:0015174"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"high-affinity basic amino acid transmembrane transporter activity","synonyms":[{"name":"high affinity basic amino acid transmembrane transporter activity","type":"exact"},{"name":"high-affinity basic amino acid transporter activity","type":"broad"}],"termid":"GO:0005287"}


id: MONDO:0030975
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 20","secondary_identifiers":["MEDGEN:1808256","OMIM:619938","UMLS:C5677011"],"synonyms":[{"name":"POF20","type":"exact"},{"name":"premature ovarian failure 20","type":"exact"}],"termid":"MONDO:0030975","xrefs":{"Monarch":{"xref_id":"0030975"}}}


id: PBO:0084268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral membrane protein; localized to late Golgi vesicles along with the v-SNARE Tlg2p","termid":"PBO:0084268"}


id: GO:0031639
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which inactive plasminogen is processed to active plasmin. This process includes cleavage at an internal Arg-Val site to form an N-terminal A-chain and C-terminal B-chain held together by a disulfide bond, and can include further proteolytic cleavage events to remove the preactivation peptide.","definition_xrefs":["PMID:9548733"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zymogen activation","termid":"GO:0031638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051604"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0051604"],"is_obsolete":false,"name":"plasminogen activation","synonyms":[{"name":"cleavage of plasminogen to plasmin","type":"exact"}],"termid":"GO:0031639"}


id: MONDO:0020728
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypouricemia, renal","termid":"MONDO:0968951"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hypouricemia, renal 1","secondary_identifiers":["MEDGEN:141632","OMIM:220150","UMLS:C0473219"],"synonyms":[{"name":"Dalmatian hypouricemia","type":"related"},{"name":"RHUC1","type":"related"},{"name":"hypouricemia, renal, 1","type":"related"},{"name":"hypouricemia, renal, type 1","type":"related"},{"name":"renal hypouricemia","type":"related"}],"termid":"MONDO:0020728","xrefs":{"Monarch":{"xref_id":"0020728"}}}


id: GO:0008964
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphate + oxaloacetate = phosphoenolpyruvate + HCO3-.","definition_xrefs":["EC:4.1.1.31"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphoenolpyruvate carboxykinase activity","termid":"GO:0004611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0016829","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphoenolpyruvate carboxylase activity","secondary_identifiers":["MetaCyc:PEPCARBOX-RXN","RHEA:28370","KEGG_REACTION:R00345"],"synonyms":[{"name":"PEP carboxylase activity","type":"related"},{"name":"PEPC","type":"related"},{"name":"PEPCase activity","type":"related"},{"name":"phosphate:oxaloacetate carboxy-lyase (adding phosphate; phosphoenolpyruvate-forming)","type":"related"},{"name":"phosphate:oxaloacetate carboxy-lyase (phosphorylating)","type":"related"},{"name":"phosphoenolpyruvic carboxylase activity","type":"related"},{"name":"phosphopyruvate (phosphate) carboxylase activity","type":"related"}],"termid":"GO:0008964"}


id: GO:1990516
data:
  {"annotated_genes":["SJAG_02039"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100130],"is_not":false,"summary":null,"term":"GO:1990516"}]},"cv_name":"biological_process","definition":"The pathway by which a ribonucleotide is removed from DNA and replaced by a deoxyribonucleotide. The ribonucleotide is incised by RNase H2, and further excised by an endonuclease. The resulting 1 nt gap is then repaired by DNA polymerase and DNA ligase.","definition_xrefs":["PMID:12475934","PMID:22864116"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mismatch repair involved in maintenance of fidelity involved in DNA-dependent DNA replication","termid":"GO:0070716"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02039":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150","GO:0006281"],"is_obsolete":false,"name":"ribonucleotide excision repair","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990516","terms_by_termid":{"GO:1990516":null}}


id: GO:0097555
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cilium (also called flagellum) found in Giardia species (trophozoite stage). It originates at the right anterior basal body, extends laterally through the cytoplasm, crosses the left anterior axoneme, and exits as a membrane-bound flagellum on the anterior right side of the cell.","definition_xrefs":["GOC:giardia","PMID:16607022","ISBN:9780124260207","PMID:5961344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"9+2 motile cilium","termid":"GO:0097729"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"right anterior flagellum","synonyms":[{"name":"right anterior cilium","type":"exact"}],"termid":"GO:0097555"}


id: GO:0034017
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-dec-2-enoyl-[acyl-carrier protein] = cis-dec-3-enoyl-[acyl-carrier protein].","definition_xrefs":["RHEA:23568"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, transposing C=C bonds","termid":"GO:0016863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"trans-2-decenoyl-acyl-carrier-protein isomerase activity","secondary_identifiers":["EC:5.3.3.14","GO:0043832","MetaCyc:5.3.3.14-RXN"],"synonyms":[{"name":"beta-hydroxydecanoyl thioester dehydrase activity","type":"broad"},{"name":"decenoyl-acyl-carrier-protein delta2-trans-delta3-cis-isomerase activity","type":"related"},{"name":"trans-2, cis-3 decenoyl-ACP isomerase activity","type":"exact"},{"name":"trans-2, cis-3 decenoyl-[acyl-carrier-protein] isomerase activity","type":"exact"},{"name":"trans-2,cis-3-decenoyl-ACP isomerase activity","type":"related"},{"name":"trans-2-cis-3-decenoyl-ACP isomerase activity","type":"related"},{"name":"trans-2-decenoyl-ACP isomerase activity","type":"related"}],"termid":"GO:0034017"}


id: MONDO:0850103
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"non-specific autoimmune supratentorial encephalitis without characteristic antibodies","secondary_identifiers":["MEDGEN:1843156","Orphanet:624178","GARD:22498","UMLS:C5680409"],"termid":"MONDO:0850103","xrefs":{"Monarch":{"xref_id":"0850103"}}}


id: MOD:01819
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-succinyl-L-lysine.","definition_xrefs":["PubMed:21151122","PubMed:16582421","RESID:AA0545"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinylated residue","termid":"MOD:01029"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-succinyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-[(3-carboxypropanoyl)amino]hexanoic acid","type":"exact"},{"name":"2-azanyl-6-[(3-carboxypropanoyl)azanyl]hexanoic acid","type":"exact"},{"name":"4-[[(5S)-5-amino-6-hydroxy-6-oxohexyl]amino]-4-oxobutanoate","type":"exact"},{"name":"MOD_RES N6-succinyllysine","type":"exact"},{"name":"N(epsilon)-(succinyl)lysine","type":"exact"},{"name":"N6-succinyl-L-lysine","type":"exact"},{"name":"succinyllysine","type":"exact"}],"termid":"MOD:01819"}


id: FYPO:0005023
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a cell is inviable, contains one nucleus and one or more septa and is elongated. Cells with this phenotype are inviable, and the nucleus is not in the normal location.","definition_xrefs":["PomBase:vw","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"inviable elongated vegetative cell","termid":"FYPO:0001490"},{"relation_name":"is_a","term_name":"inviable septated mononucleate vegetative cell","termid":"FYPO:0002000"},{"relation_name":"is_a","term_name":"inviable elongated mononucleate vegetative cell with mislocalized nucleus","termid":"FYPO:0002337"},{"relation_name":"is_a","term_name":"inviable septated vegetative cell with abnormal cell morphology","termid":"FYPO:0002452"},{"relation_name":"is_a","term_name":"elongated septated vegetative cell","termid":"FYPO:0004750"},{"relation_name":"output_of","term_name":"cut","termid":"FYPO:0000229"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000641","FYPO:0000337","FYPO:0005447","FYPO:0000138","FYPO:0000005","FYPO:0000032","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000004","FYPO:0000002"],"is_obsolete":false,"name":"inviable elongated septated mononucleate vegetative cell","synonyms":[{"name":"elongated cell with cytokinesis in the absence of nuclear division","type":"related"},{"name":"elongated cell with cytokinesis without nuclear division","type":"related"},{"name":"elongated cell with septation in the absence of nuclear division","type":"related"},{"name":"elongated cell with septation independent of mitosis","type":"related"},{"name":"elongated cell with septation without nuclear division","type":"related"},{"name":"inviable elongated cell with premature septation","type":"related"},{"name":"inviable elongated septated mononucleate cell","type":"exact"},{"name":"inviable elongated septated mononucleate cell during vegetative growth","type":"exact"},{"name":"inviable elongated septated mononucleate vegetative cell during mitotic cell cycle","type":"related"},{"name":"inviable elongated septated mononucleate vegetative cell with mislocalized nucleus","type":"exact"},{"name":"inviable septated mononucleate elongated vegetative cell","type":"exact"},{"name":"lethal; elongated septated mononucleate vegetative cell","type":"exact"}],"termid":"FYPO:0005023"}


id: GO:0030665
data:
  {"annotated_genes":["SJAG_04609","SJAG_01809","SJAG_01167","SJAG_04517","SJAG_02453","SJAG_00800","SJAG_04565","SJAG_00104","SJAG_00108","SJAG_02177","SJAG_00379","SJAG_02805","SJAG_04644","SJAG_02282"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[68659,96193],"is_not":false,"summary":null,"term":"GO:0030665"},{"annotations":[63029,114840,79573,115051],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030121"},{"annotations":[76409,58892,80206,110371],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030122"},{"annotations":[59299,66833],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030130"},{"annotations":[81718,75779],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030125"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a clathrin-coated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coated vesicle membrane","termid":"GO:0030662"},{"relation_name":"part_of","term_name":"clathrin-coated vesicle","termid":"GO:0030136"}],"gene_count":14,"genes_by_uniquename":{"SJAG_00104":null,"SJAG_00108":null,"SJAG_00379":null,"SJAG_00800":null,"SJAG_01167":null,"SJAG_01809":null,"SJAG_02177":null,"SJAG_02282":null,"SJAG_02453":null,"SJAG_02805":null,"SJAG_04517":null,"SJAG_04565":null,"SJAG_04609":null,"SJAG_04644":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"clathrin-coated vesicle membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000044":null,"GO_REF:0000107":null},"synonyms":[{"name":"clathrin coated vesicle membrane","type":"narrow"}],"termid":"GO:0030665","terms_by_termid":{"GO:0030121":null,"GO:0030122":null,"GO:0030125":null,"GO:0030130":null,"GO:0030665":null}}


id: MONDO:0020757
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A migraine disorder characterized by an aura that includes motor weakness and the absence of family history.","definition_xrefs":["NCIT:C117011"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial or sporadic hemiplegic migraine","termid":"MONDO:0018925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sporadic hemiplegic migraine","secondary_identifiers":["MEDGEN:318737","UMLS:C1832903","icd11.foundation:1303340532"],"synonyms":[{"name":"sporadic hemiplegic migraine","type":"exact"}],"termid":"MONDO:0020757","xrefs":{"Monarch":{"xref_id":"0020757"}}}


id: PBO:0083641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Eisosome core component; eisosomes are large immobile cell cortex structures associated with endocytosis; detected in phosphorylated state in mitochondria; phosphorylated on Thr233 upon Pkc1p hyperactivation in a Slt2p MAPK-dependent fashion; null mutant shows activation of Pkc1p/Ypk1p stress resistance pathways; member of BAR domain family; protein increases in abundance and relocalizes from plasma membrane to cytoplasm upon DNA replication stress","termid":"PBO:0083641"}


id: FYPO:0007615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription from a promoter that contains one or more STREP motifs occurs to a greater extent than normal during a cellular response to nitric oxide.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription during cellular response to nitric oxide","termid":"FYPO:0002781"},{"relation_name":"is_a","term_name":"increased transcription from STREP promoter","termid":"FYPO:0007612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000294","FYPO:0006551","FYPO:0005447","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased transcription from STREP promoter during cellular response to nitric oxide","synonyms":[{"name":"increased transcription from STREP promoter during cellular response to NO","type":"exact"},{"name":"increased transcription from STREP promoter during cellular response to nitric oxide during mitotic cell cycle","type":"related"},{"name":"increased transcription from STREP promoter during cellular response to nitric oxide during vegetative growth","type":"exact"}],"termid":"FYPO:0007615"}


id: MONDO:0033329
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete genetic precocious puberty (obsolete MONDO:0033329)","secondary_identifiers":["Orphanet:435554"],"termid":"MONDO:0033329","xrefs":{"Monarch":{"xref_id":"0033329"}}}


id: FYECO:0000236
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium containing maltose as the carbon source, yeast extract and other components.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping rich medium","termid":"FYECO:0000080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"maltose YE","synonyms":[{"name":"maltose rich medium","type":"broad"}],"termid":"FYECO:0000236"}


id: MONDO:0015559
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aggressive systemic mastocytosis","termid":"MONDO:0020333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"lymphoadenopathic mastocytosis with eosinophilia","secondary_identifiers":["icd11.foundation:809306056","Orphanet:158793"],"termid":"MONDO:0015559","xrefs":{"Monarch":{"xref_id":"0015559"}}}


id: GO:0019060
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a viral protein within the host cell.","definition_xrefs":["GOC:ai","ISBN:0781718325","PMID:9188566","PMID:11581394","ISBN:0781702534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont intracellular protein transport in host","termid":"GO:0030581"},{"relation_name":"part_of","term_name":"regulation by virus of viral protein levels in host cell","termid":"GO:0046719"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"intracellular transport of viral protein in host cell","secondary_identifiers":["GO:0046742","GO:0046801","Reactome:R-HSA-168874","GO:0046743"],"synonyms":[{"name":"cytoplasmic viral capsid transport","type":"narrow"},{"name":"intracellular transport of viral capsid in host cell","type":"narrow"},{"name":"intracellular transport of viral capsid protein in host cell","type":"narrow"},{"name":"intracellular transport of viral proteins in host cell","type":"exact"},{"name":"intracellular viral capsid transport","type":"narrow"},{"name":"intracellular viral protein transport","type":"exact"},{"name":"nuclear viral capsid transport","type":"narrow"},{"name":"viral capsid transport in host cell cytoplasm","type":"narrow"},{"name":"viral capsid transport in host cell nucleus","type":"narrow"}],"termid":"GO:0019060"}


id: PBO:0078232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 14","termid":"PBO:0078232"}


id: PBO:0086328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein with similarity to tRNA synthetases; non-tagged protein is detected in purified mitochondria; null mutant is viable and displays elevated frequency of mitochondrial genome loss","termid":"PBO:0086328"}


id: PBO:0091316
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by A. thaliana AtSGP1","termid":"PBO:0091316"}


id: PBO:0060467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOTCH1 associated lncRNA in T cell acute lymphoblastic leukemia 1","termid":"PBO:0060467"}


id: GO:0120542
data:
  {"annotated_genes":["SJAG_01414","SJAG_03822","SJAG_03370","SJAG_00240"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[100745,100746,116673,116674],"is_not":false,"summary":null,"term":"GO:0120542"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ethanol + NAD+ = acetaldehyde + NADH + H+.","definition_xrefs":["RHEA:25290"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol dehydrogenase (NAD+) activity","termid":"GO:0004022"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00240":null,"SJAG_01414":null,"SJAG_03370":null,"SJAG_03822":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"ethanol dehydrogenase (NAD+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0120542","terms_by_termid":{"GO:0120542":null}}


id: PBO:0081967
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger RANBP2-type containing 1","termid":"PBO:0081967"}


id: MONDO:0022682
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cennamo gangemi syndrome","synonyms":[{"name":"hydrocephalus cataract microphthalmos","type":"related"}],"termid":"MONDO:0022682","xrefs":{"Monarch":{"xref_id":"0022682"}}}


id: GO:0034372
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The acquisition, loss or modification of a protein or lipid within a very-low-density lipoprotein particle, including the hydrolysis of triglyceride by hepatic lipase or lipoprotein lipase and the subsequent loss of free fatty acid.","definition_xrefs":["GOC:expert_pt","GOC:mah","GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triglyceride-rich lipoprotein particle remodeling","termid":"GO:0034370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"very-low-density lipoprotein particle remodeling","synonyms":[{"name":"VDL formation","type":"related"},{"name":"VDL remodeling","type":"exact"},{"name":"VDL remodelling","type":"exact"},{"name":"very-low-density lipoprotein particle remodelling","type":"exact"}],"termid":"GO:0034372"}


id: PBO:0089593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CLRC complex-Argonaute linker protein Stc1","termid":"PBO:0089593"}


id: PBO:0003304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human COMT homolog 1","termid":"PBO:0003304"}


id: PBO:0066294
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein Y-linked family 2 member V, pseudogene","termid":"PBO:0066294"}


id: PBO:0039644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adaptor related protein complex 1 subunit beta 1","termid":"PBO:0039644"}


id: PBO:0087031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L15A; binds to 5.8 S rRNA; homologous to mammalian ribosomal protein L15, no bacterial homolog; RPL15A has a paralog, RPL15B, that arose from the whole genome duplication","termid":"PBO:0087031"}


id: PBO:0004502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 snRNP-associated protein Usp102","termid":"PBO:0004502"}


id: PBO:0065048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRELI domain containing 3B pseudogene 2","termid":"PBO:0065048"}


id: GO:0015361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: dicarboxylate(out) + Na+(out) = dicarboxylate(in) + Na+(in). In low-affinity transport the transporter is able to bind the solute only if it is present at very high concentrations.","definition_xrefs":["TC:2.A.47.1.1"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sodium:dicarboxylate symporter activity","termid":"GO:0017153"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"low-affinity sodium:dicarboxylate symporter activity","secondary_identifiers":["Reactome:R-HSA-433131"],"synonyms":[{"name":"low affinity sodium:dicarboxylate cotransporter activity","type":"broad"},{"name":"low affinity sodium:dicarboxylate symporter activity","type":"exact"}],"termid":"GO:0015361"}


id: PBO:0028080
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-multiple_mitotic_spindles","termid":"PBO:0028080"}


id: PBO:0003194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininosuccinate synthase (predicted)","termid":"PBO:0003194"}


id: MONDO:0007872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A multiple congenital anomaly syndrome characterized by hypoplasia, aplasia or atresia of the lacrimal system; anomalies of the ears and hearing loss; hypoplasias, apalsias or atresias of the salivary glands; dental anomalies and digital malformations.","definition_xrefs":["Orphanet:2363"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nose and cavum anomaly (obsolete MONDO:0015503)","termid":"MONDO:0015503"},{"relation_name":"excluded_subClassOf","term_name":"obsolete hereditary otorhinolaryngological malformation (obsolete MONDO:0018562)","termid":"MONDO:0018562"},{"relation_name":"excluded_subClassOf","term_name":"obsolete EEC syndrome and related syndrome (obsolete MONDO:0020197)","termid":"MONDO:0020197"},{"relation_name":"is_a","term_name":"autosomal dominant disease","termid":"MONDO:0000426"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"},{"relation_name":"is_a","term_name":"polydactyly-syndactyly-triphalangism","termid":"MONDO:0800066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"LADD syndrome","secondary_identifiers":["ICD9:759.89","DOID:0050331","DOID:0081370","MEDGEN:78545","NORD:1345","MESH:C538132","GARD:6848","OMIMPS:149730","SCTID:23817003","UMLS:C0265269"],"synonyms":[{"name":"LACRIMOAURICULODENTODIGITAL syndrome","type":"exact"},{"name":"LADD","type":"related"},{"name":"LADD syndrome","type":"exact"},{"name":"Lacrimo-auriculo-dento-digital syndrome","type":"exact"},{"name":"Lacrimoauriculodento-digital syndrome","type":"exact"},{"name":"Lacrimoauriculoradiodental syndrome","type":"exact"},{"name":"Levy Hollister syndrome","type":"exact"},{"name":"Levy-Hollister syndrome","type":"exact"},{"name":"lacrimoauriculodentodigital syndrome","type":"exact"},{"name":"lard syndrome","type":"exact"}],"termid":"MONDO:0007872","xrefs":{"Monarch":{"xref_id":"0007872"}}}


id: GO:0048893
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an afferent axon in a lateral line nerve over time from its formation to the mature structure. This process includes axonogenesis and pathfinding of the afferent axons in any lateral line nerve.","definition_xrefs":["PMID:15832385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon development","termid":"GO:0061564"},{"relation_name":"part_of","term_name":"lateral line nerve development","termid":"GO:0048892"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"afferent axon development in lateral line nerve","termid":"GO:0048893"}


id: GO:0004814
data:
  {"annotated_genes":["SJAG_00653"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78321],"is_not":false,"summary":null,"term":"GO:0004814"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-arginine + tRNA(Arg) = AMP + diphosphate + L-arginyl-tRNA(Arg).","definition_xrefs":["EC:6.1.1.19"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoacyl-tRNA ligase activity","termid":"GO:0004812"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00653":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140101","GO:0140098","GO:0003824","GO:0016874"],"is_obsolete":false,"name":"arginine-tRNA ligase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:ARGININE--TRNA-LIGASE-RXN","Reactome:R-HSA-379993","RHEA:20301","Reactome:R-HSA-380224"],"synonyms":[{"name":"L-arginine:tRNAArg ligase (AMP-forming)","type":"related"},{"name":"arginine translase activity","type":"related"},{"name":"arginine-tRNA synthetase activity","type":"related"},{"name":"arginyl transfer ribonucleic acid synthetase activity","type":"related"},{"name":"arginyl-tRNA synthetase activity","type":"exact"},{"name":"arginyl-transfer RNA synthetase activity","type":"related"},{"name":"arginyl-transfer ribonucleate synthetase activity","type":"related"}],"termid":"GO:0004814","terms_by_termid":{"GO:0004814":null}}


id: PBO:0057907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3610","termid":"PBO:0057907"}


id: GO:0019507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving pyridine, a nitrogenous base (C5H5N) obtained from the distillation of bone oil or coal tar, and by the decomposition of certain alkaloids, as a colorless liquid with a peculiar pungent odor.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete pyridine metabolic process (obsolete GO:0019507)","synonyms":[{"name":"pyridine metabolism","type":"exact"}],"termid":"GO:0019507"}


id: PBO:0084657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Minus-end-directed microtubule motor; functions in mitosis and meiosis, localizes to the spindle pole body and localization is dependent on functional Cik1p, required for nuclear fusion during mating; potential Cdc28p substrate","termid":"PBO:0084657"}


id: PBO:0079979
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 17","termid":"PBO:0079979"}


id: GO:0019942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a protein or peptide by hydrolysis of its peptide bonds, initiated by covalent attachment of the ubiquitin-like protein NEDD8 (RUB1) to the target protein.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete NEDD8 class-dependent protein catabolic process (obsolete GO:0019942)","synonyms":[{"name":"NEDD8 class-dependent protein breakdown","type":"exact"},{"name":"NEDD8 class-dependent protein catabolic process","type":"exact"},{"name":"NEDD8 class-dependent protein catabolism","type":"exact"},{"name":"NEDD8 class-dependent protein degradation","type":"exact"},{"name":"RUB1-dependent protein catabolic process","type":"exact"},{"name":"RUB1-dependent protein catabolism","type":"exact"},{"name":"RUB1-dependent protein degradation","type":"exact"}],"termid":"GO:0019942"}


id: PBO:0087113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosome-associated, nascent chain binding factor; binds N-terminal region of nascent peptides during translation; recognizes target proteins via its putative metallopeptidase peptide-binding pocket","termid":"PBO:0087113"}


id: GO:0140920
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of thermomorphogenesis.","definition_xrefs":["PMID:27250752"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of post-embryonic development","termid":"GO:0048580"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"thermomorphogenesis","termid":"GO:0140919"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of thermomorphogenesis","termid":"GO:0140920"}


id: PBO:0077074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIA1 cytotoxic granule associated RNA binding protein like 1","termid":"PBO:0077074"}


id: PBO:0054025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1356","termid":"PBO:0054025"}


id: MONDO:0005061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the lung and is characterized by the presence of malignant glandular epithelial cells. There is a male predilection with a male to female ratio of 2:1. Usually lung adenocarcinoma is asymptomatic and is identified through screening studies or as an incidental radiologic finding. If clinical symptoms are present they include shortness of breath, cough, hemoptysis, chest pain, and fever. Tobacco smoke is a known risk factor.","definition_xrefs":["NCIT:C3512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenocarcinoma","termid":"MONDO:0004970"},{"relation_name":"is_a","term_name":"non-small cell lung carcinoma","termid":"MONDO:0005233"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"lung adenocarcinoma","secondary_identifiers":["DOID:3910","MEDGEN:57744","SCTID:254626006","ONCOTREE:LUAD","MESH:C538231","EFO:0000571","UMLS:C0152013","Orphanet:415268"],"synonyms":[{"name":"adenocarcinoma of lung","type":"exact"},{"name":"adenocarcinoma of the lung","type":"exact"},{"name":"bronchogenic lung adenocarcinoma","type":"exact"},{"name":"lung adenocarcinoma","type":"exact"},{"name":"non-small cell lung adenocarcinoma","type":"exact"},{"name":"nonsmall cell adenocarcinoma","type":"exact"}],"termid":"MONDO:0005061","xrefs":{"Monarch":{"xref_id":"0005061"}}}


id: PBO:0043115
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic iron-sulfur assembly component 2A","termid":"PBO:0043115"}


id: PBO:0000915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Par2","termid":"PBO:0000915"}


id: PBO:0052656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 8 pseudogene 24","termid":"PBO:0052656"}


id: GO:0044561
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism effects a change in the frequency, rate or extent of the activity of an ion channel in another organism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of ion channel activity in another organism (obsolete GO:0044561)","synonyms":[{"name":"modulation of ion channel activity in other organism","type":"exact"},{"name":"regulation of ion channel activity in other organism","type":"exact"}],"termid":"GO:0044561"}


id: MONDO:0044687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare inflammatory optic neuropathy characterized by severe and persistent pain followed by subacute visual loss, a relapsing-remitting course, and steroid-dependence. Involvement of both optic nerves is common and is usually sequential. Serum antibodies against aquaporin 4 are absent in most cases. Magnetic resonance imaging shows contrast enhancement of the acutely inflamed optic nerves.","definition_xrefs":["Orphanet:499085"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autoimmune/inflammatory optic neuropathy","termid":"MONDO:0044685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"chronic relapsing inflammatory optic neuropathy","secondary_identifiers":["MEDGEN:1798657","UMLS:C5567234","GARD:22038"],"synonyms":[{"name":"CRION","type":"exact"},{"name":"chronic recurrent isolated optic neuritis","type":"exact"}],"termid":"MONDO:0044687","xrefs":{"Monarch":{"xref_id":"0044687"}}}


id: PBO:0078512
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 6","termid":"PBO:0078512"}


id: PBO:0051155
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-35 (non-functional)","termid":"PBO:0051155"}


id: PBO:0045262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DND microRNA-mediated repression inhibitor 1 pseudogene 2","termid":"PBO:0045262"}


id: MONDO:0005510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Collection of urine in the renal pelvis that results in dilatation of the renal pelvis and calyces. It is caused by obstruction of urine flow, nephrolithiasis, or vesicoureteral reflux. Signs and symptoms include flank pain, nausea, vomiting, fever, and dysuria.","definition_xrefs":["EFO:0005562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"urinary tract obstruction","termid":"MONDO:0003330"},{"relation_name":"is_a","term_name":"kidney disorder","termid":"MONDO:0005240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"hydronephrosis","secondary_identifiers":["ICD9:591","UMLS:C0020295","DOID:11111","MEDGEN:42531","MESH:D006869","NCIT:C26796","SCTID:43064006"],"termid":"MONDO:0005510","xrefs":{"Monarch":{"xref_id":"0005510"}}}


id: PBO:0073995
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 3 pseudogene 2","termid":"PBO:0073995"}


id: GO:0033349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving apiose, the branched tetrose 3-C-(hydroxymethyl)-D-glycero-tetrose.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrose metabolic process","termid":"GO:0033347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"apiose metabolic process","synonyms":[{"name":"apiose metabolism","type":"exact"}],"termid":"GO:0033349"}


id: GO:0097079
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: selenite(out) + H+(out) = selenite(in) + H+(in).","definition_xrefs":["PMID:20861301","GOC:mcc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"solute:proton symporter activity","termid":"GO:0015295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"selenite:proton symporter activity","synonyms":[{"name":"selenite:H+ symporter activity","type":"exact"},{"name":"selenite:hydrogen symporter activity","type":"exact"}],"termid":"GO:0097079"}


id: GO:0043329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of directing proteins towards a membrane using signals contained within the protein, occurring that contributes to ubiquitin-dependent protein catabolism via the MVB pathway; the destruction of a protein or peptide covalently tagged with a ubiquitin, via the multivesicular body (MVB) sorting pathway.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein targeting to membrane involved in ubiquitin-dependent protein catabolic process via the multivesicular body sorting pathway (obsolete GO:0043329)","synonyms":[{"name":"protein membrane targeting during ubiquitin-dependent protein catabolic process via the MVB pathway","type":"exact"},{"name":"protein membrane targeting during ubiquitin-dependent protein catabolism via the MVB pathway","type":"exact"},{"name":"protein targeting to membrane during ubiquitin-dependent protein breakdown via the MVB pathway","type":"exact"},{"name":"protein targeting to membrane during ubiquitin-dependent protein catabolic process via the MVB pathway","type":"related"},{"name":"protein targeting to membrane during ubiquitin-dependent protein degradation via the MVB pathway","type":"exact"},{"name":"protein-membrane targeting during ubiquitin-dependent protein breakdown via the MVB pathway","type":"exact"},{"name":"protein-membrane targeting during ubiquitin-dependent protein catabolic process via the MVB pathway","type":"exact"},{"name":"protein-membrane targeting during ubiquitin-dependent protein catabolism via the MVB pathway","type":"exact"},{"name":"protein-membrane targeting during ubiquitin-dependent protein degradation via the MVB pathway","type":"exact"}],"termid":"GO:0043329"}


id: PR:Q96WV0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ure7 gene.","definition_xrefs":["UniProtKB:Q96WV0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized urease accessory protein ureG-like (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCPB16A4.05c","synonyms":[{"name":"Spom972h-ure7","type":"exact"}],"termid":"PR:Q96WV0"}


id: GO:0003963
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + RNA 3'-terminal-phosphate = AMP + diphosphate + RNA terminal-2',3'-cyclic-phosphate.","definition_xrefs":["EC:6.5.1.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"ligase activity, forming phosphoric ester bonds","termid":"GO:0016886"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0009975","GO:0016874","GO:0003824","GO:0003674","GO:0140098"],"is_obsolete":false,"name":"RNA-3'-phosphate cyclase activity","secondary_identifiers":["RHEA:23976","MetaCyc:RNA-3-PHOSPHATE-CYCLASE-RXN"],"synonyms":[{"name":"RNA 3'-terminal phosphate cyclase activity","type":"related"},{"name":"RNA cyclase activity","type":"related"},{"name":"RNA-3'-phosphate:RNA ligase (cyclizing, AMP-forming)","type":"related"}],"termid":"GO:0003963"}


id: SO:0000666
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An intron (mitochondrial, chloroplast, nuclear or prokaryotic) that encodes a double strand sequence specific endonuclease allowing for mobility.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"mobile","termid":"SO:0001234"},{"relation_name":"is_a","term_name":"intron","termid":"SO:0000188"},{"relation_name":"is_a","term_name":"mobile_genetic_element","termid":"SO:0001037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mobile_intron","synonyms":[{"name":"mobile intron","type":"exact"}],"termid":"SO:0000666"}


id: PBO:0066125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras association domain family member 4","termid":"PBO:0066125"}


id: PBO:0058803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7845","termid":"PBO:0058803"}


id: PBO:0071204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 45","termid":"PBO:0071204"}


id: PBO:0067812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 114","termid":"PBO:0067812"}


id: GO:0035316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of non-sensory hairs. These hairs are polarized cellular extensions that cover much of the insect epidermis.","definition_xrefs":["GOC:mtg_sensu","PMID:11064425"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane bounded cell projection organization","termid":"GO:0120036"},{"relation_name":"part_of","term_name":"hair cell differentiation","termid":"GO:0035315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"non-sensory hair organization","synonyms":[{"name":"non-sensory hair organization and biogenesis","type":"related"},{"name":"trichome organisation","type":"broad"},{"name":"trichome organization and biogenesis","type":"broad"}],"termid":"GO:0035316"}


id: MOD:00838
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes three (1)H protium atoms with three (2)H deuterium atoms to produce 3x(2)H labeled L-leucine.","definition_xrefs":["Unimod:262#L"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deuterium trisubstituted residue","termid":"MOD:00585"},{"relation_name":"is_a","term_name":"modified L-leucine residue","termid":"MOD:00911"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3x(2)H labeled L-leucine","synonyms":[{"name":"D(H)3Leu","type":"exact"},{"name":"Label:2H(3)","type":"related"},{"name":"Trideuteration","type":"related"}],"termid":"MOD:00838"}


id: FYPO:0006945
data:
  {"alleles_by_uniquename":{"SJAG_02763:allele-3":{"allele_type":"amino_acid_mutation","description":"S235A; S651","gene_uniquename":"SJAG_02763","name":"ned1S235A/S651","synonyms":[{"name":"refractory to phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-3"},"SJAG_02763:allele-6":{"allele_type":"amino_acid_mutation","description":"S499A; S538A; T620A; T638A; S651A","gene_uniquename":"SJAG_02763","name":"ned1-5A","synonyms":[{"name":"refractory to potential proline-directed kinase phosphorylation","reference":"PMID:26774782","type":"exact"}],"uniquename":"SJAG_02763:allele-6"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121661,121668],"is_not":false,"summary":null,"term":"FYPO:0006945"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of lipid droplet formation is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"has_output","term_name":"lipid droplets present in decreased numbers","termid":"FYPO:0002552"},{"relation_name":"is_a","term_name":"abnormal lipid droplet formation","termid":"FYPO:0008430"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02763":null},"genotype_count":2,"genotypes_by_uniquename":{"ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1-5A(S499A; S538A; T620A; T638A; S651A aa)","display_uniquename":"ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-6","expression":"Not assayed or wild type"}]}]},"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"ned1S235A/S651(S235A; S651 aa)","display_uniquename":"ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02763:allele-3","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased lipid droplet formation","references_by_uniquename":{"PMID:26774782":null},"single_locus_annotated_genes":["SJAG_02763"],"single_locus_genotype_uniquenames":["ned1S235A_S651-S235A__S651-amino_acid_mutation-expression-not_assayed_or_wild_type","ned1-5A-S499A__S538A__T620A__T638A__S651A-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"increased lipid droplet assembly","type":"exact"},{"name":"increased lipid particle formation","type":"exact"}],"termid":"FYPO:0006945","terms_by_termid":{"FYPO:0006945":null,"FYPO_EXT:0000001":null}}


id: GO:2000004
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of metanephric S-shaped body morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:obol","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of animal organ morphogenesis","termid":"GO:2000027"},{"relation_name":"regulates","term_name":"metanephric S-shaped body morphogenesis","termid":"GO:0072284"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of metanephric S-shaped body morphogenesis","termid":"GO:2000004"}


id: PBO:0068081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 387","termid":"PBO:0068081"}


id: PBO:0087960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transmembrane protein with a highly basic C-terminal region","termid":"PBO:0087960"}


id: PBO:0074225
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 45 member 4","termid":"PBO:0074225"}


id: PBO:0029382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_nicotinamide","termid":"PBO:0029382"}


id: GO:0009998
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that restricts, stops or prevents a cell from specifying into a retinal cone cell.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cell fate specification","termid":"GO:0009996"},{"relation_name":"is_a","term_name":"regulation of retinal cone cell fate specification","termid":"GO:0042673"},{"relation_name":"is_a","term_name":"negative regulation of retinal cone cell fate commitment","termid":"GO:0060226"},{"relation_name":"negatively_regulates","term_name":"retinal cone cell fate specification","termid":"GO:0042672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cone cell fate specification","synonyms":[{"name":"down regulation of retinal cone cell fate specification","type":"exact"},{"name":"down-regulation of retinal cone cell fate specification","type":"exact"},{"name":"downregulation of retinal cone cell fate specification","type":"exact"},{"name":"inhibition of retinal cone cell fate specification","type":"narrow"},{"name":"negative regulation of retina cone cell fate specification","type":"exact"},{"name":"suppression of retina cone cell fate","type":"exact"},{"name":"suppression of retinal cone cell fate","type":"exact"}],"termid":"GO:0009998"}


id: PBO:0091954
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"wtf meiotic drive antidote Wtf13","termid":"PBO:0091954"}


id: PBO:0072108
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S13 pseudogene 6","termid":"PBO:0072108"}


id: MONDO:0013664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY disorder of sex development due to testicular 17,20-desmolase deficiency","secondary_identifiers":["SCTID:49013001","GARD:17752","OMIM:614279","UMLS:C1839840","MEDGEN:333416","Orphanet:443087","DOID:0111773","MESH:C564109"],"synonyms":[{"name":"46,XY sex reversal 8","type":"related"},{"name":"46,XY sex reversal type 8","type":"exact"},{"name":"46XY sex reversal 8","type":"exact"},{"name":"46XY sex reversal 8, modifier of","type":"exact"},{"name":"SRXY8","type":"related"},{"name":"male pseudohermaphroditism due to deficiency of testicular 17,20-desmolase","type":"related"}],"termid":"MONDO:0013664","xrefs":{"Monarch":{"xref_id":"0013664"}}}


id: PBO:0024801
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-involved_in","termid":"PBO:0024801"}


id: GO:0043661
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane that surrounds one or more bacteroids (such as nitrogen-fixing bacteroids within legume root nodule cells).","definition_xrefs":["GOC:cc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endocytic vesicle membrane","termid":"GO:0030666"},{"relation_name":"part_of","term_name":"bacteroid-containing symbiosome","termid":"GO:0043660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"peribacteroid membrane","termid":"GO:0043661"}


id: GO:0036487
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and stops, prevents or reduces the activity of nitric oxide synthase.","definition_xrefs":["GOC:rl","PMID:17242280","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme inhibitor activity","termid":"GO:0004857"},{"relation_name":"is_a","term_name":"nitric-oxide synthase regulator activity","termid":"GO:0030235"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0004857"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140678"}],"interesting_parent_ids":["GO:0140678","GO:0098772","GO:0003674","GO:0004857","GO:0030234"],"is_obsolete":false,"name":"nitric-oxide synthase inhibitor activity","secondary_identifiers":["Reactome:R-HSA-203712"],"synonyms":[{"name":"NOS inhibitor activity","type":"exact"},{"name":"nitric oxide synthase inhibitor activity","type":"exact"}],"termid":"GO:0036487"}


id: PBO:0086572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; conserved among S. cerevisiae strains; YPR064W is not an essential gene","termid":"PBO:0086572"}


id: PBO:0041718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calreticulin 3","termid":"PBO:0041718"}


id: PBO:0004408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp7 (predicted)","termid":"PBO:0004408"}


id: PBO:0017039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial endonuclease, possibly DNA damage related (predicted)","termid":"PBO:0017039"}


id: PBO:0028214
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_arsenate_reductase_activity","termid":"PBO:0028214"}


id: FYPO:0000305
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which spore germination is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process","termid":"FYPO:0000628"},{"relation_name":"is_a","term_name":"developmental process phenotype","termid":"FYPO:0000679"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0005447","FYPO:0001985"],"is_obsolete":false,"name":"abnormal spore germination","termid":"FYPO:0000305"}


id: PBO:0067771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 71","termid":"PBO:0067771"}


id: PBO:0084900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial transporter repressible by thiamine; THI74 has a paralog, YML018C, that arose from the whole genome duplication; shows sequence homology to human gene SLC35F3, a thiamine transporter implicated in hypertension","termid":"PBO:0084900"}


id: RO:0002522
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x bounds the sequence of y iff the upstream-most part of x is upstream of or coincident with the upstream-most part of y, and the downstream-most part of x is downstream of or coincident with the downstream-most part of y","direct_ancestors":[{"relation_name":"is_a","term_name":"sequentially_related_to","termid":"RO:0002514"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bounds_sequence_of","termid":"RO:0002522"}


id: GO:1903654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any phosphorylation of RNA polymerase II C-terminal domain serine 5 residues that is involved in positive regulation of transcription elongation from RNA polymerase II promoter.","definition_xrefs":["GOC:TermGenie","PMID:19328067","GO_REF:0000060"],"gene_count":0,"genotype_count":0,"name":"obsolete phosphorylation of RNA polymerase II C-terminal domain serine 5 residues involved in positive regulation of transcription elongation from RNA polymerase II promoter (obsolete GO:1903654)","termid":"GO:1903654"}


id: GO:0047818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-fuconate = 2-dehydro-3-deoxy-D-fuconate + H2O.","definition_xrefs":["EC:4.2.1.67","RHEA:12949"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016829"],"is_obsolete":false,"name":"D-fuconate dehydratase activity","secondary_identifiers":["MetaCyc:D-FUCONATE-HYDRATASE-RXN","KEGG_REACTION:R03671"],"synonyms":[{"name":"D-fuconate hydratase activity","type":"exact"},{"name":"D-fuconate hydro-lyase (2-dehydro-3-deoxy-D-fuconate-forming)","type":"related"},{"name":"D-fuconate hydro-lyase activity","type":"related"}],"termid":"GO:0047818"}


id: PATO:0001385
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's containing a non-integral multiple of the monoploid number, due to extra or missing chromosomes.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Aneuploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ploidy","termid":"PATO:0001374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aneuploid","termid":"PATO:0001385"}


id: PBO:0030777
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_growth_on_sodium_dodecyl_sulfate","termid":"PBO:0030777"}


id: PBO:0065194
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRPF4B pseudogene 1","termid":"PBO:0065194"}


id: PBO:0017845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cationic amino acid transmembrane transporter Cat1","termid":"PBO:0017845"}


id: GO:0075515
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The uptake of a virus into a host cell that begins when material is taken up into plasma membrane caveolae which then pinch off to form endocytic caveolar carriers containing the virus. The caveolar carriers then deliver their viral content to early endosomes, and the process ends when viral nucleic acid is released into the host cytoplasm by its injection through the endosome membrane.","definition_xrefs":["VZ:976","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete viral entry into host cell via caveolin-mediated endocytosis followed by genetic injection through the endosome membrane (obsolete GO:0075515)","synonyms":[{"name":"viral entry into host cell via caveolae-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"},{"name":"viral entry into host cell via caveolin-mediated endocytosis followed by genetic injection through the endosome membrane","type":"exact"}],"termid":"GO:0075515"}


id: MONDO:0023016
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duplication of leg mirror foot","termid":"MONDO:0023016","xrefs":{"Monarch":{"xref_id":"0023016"}}}


id: GO:0052076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of the ethylene-mediated defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete induction by symbiont of host ethylene-mediated defense response (obsolete GO:0052076)","synonyms":[{"name":"activation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"positive regulation by organism of defense-related ethylene-mediated signal transduction pathway in other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by organism of ethylene-mediated defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"positive regulation by symbiont of defense-related host ethylene-mediated signal transduction pathway","type":"broad"},{"name":"positive regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"stimulation by symbiont of host ethylene-mediated defense response","type":"narrow"},{"name":"up regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"up-regulation by symbiont of host ethylene-mediated defense response","type":"exact"},{"name":"upregulation by symbiont of host ethylene-mediated defense response","type":"exact"}],"termid":"GO:0052076"}


id: GO:0110147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that contributes to the delivery of nickel ions to a target protein to facilitate its maturation.","definition_xrefs":["GOC:al","PMID:24115911"],"gene_count":0,"genotype_count":0,"name":"obsolete protein maturation by nickel ion transfer (obsolete GO:0110147)","termid":"GO:0110147"}


id: PBO:0077030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"threonine synthase like 1","termid":"PBO:0077030"}


id: MONDO:0008956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital neuronal ceroid lipofuscinosis (obsolete MONDO:0008956)","secondary_identifiers":["NANDO:2201240","NANDO:1200151"],"termid":"MONDO:0008956","xrefs":{"Monarch":{"xref_id":"0008956"}}}


id: MONDO:0020348
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute motor-sensory axonal neuropathy (AMSAN) is a motor-sensory, axonal form of Guillain-Barre syndrome (GBS).","definition_xrefs":["Orphanet:98917"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Guillain-Barre syndrome, familial","termid":"MONDO:0007691"},{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute motor and sensory axonal neuropathy","secondary_identifiers":["MEDGEN:859705","NCIT:C116927","SCTID:716722005","UMLS:C3900111","GARD:19601"],"synonyms":[{"name":"AMSAN","type":"exact"},{"name":"acute motor-sensory axonal GBS","type":"exact"},{"name":"acute motor-sensory axonal Guillain-Barre syndrome","type":"exact"},{"name":"acute motor-sensory axonal Guillain-Barré syndrome","type":"exact"},{"name":"acute motor-sensory axonal neuropathy","type":"exact"}],"termid":"MONDO:0020348","xrefs":{"Monarch":{"xref_id":"0020348"}}}


id: PBO:0072597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"round spermatid basic protein 1 like","termid":"PBO:0072597"}


id: FYPO:0005704
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which a smaller than normal proportion of cells in the population remains viable after exposure to hydroxyurea.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"},{"relation_name":"is_a","term_name":"cell population viability","termid":"FYPO:0002057"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0002057"],"is_obsolete":false,"name":"loss of viability following cellular response to hydroxyurea","synonyms":[{"name":"decreased viability following cellular response to hydroxyurea","type":"exact"},{"name":"loss of cell population viability following cellular response to hydroxyurea","type":"exact"},{"name":"loss of viability following HU exposure","type":"exact"},{"name":"loss of viability following cellular response to HU","type":"exact"},{"name":"reduced viability following cellular response to hydroxyurea","type":"related"}],"termid":"FYPO:0005704"}


id: PBO:0047471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular dendritic cell secreted protein","termid":"PBO:0047471"}


id: PBO:0039702
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"APAF1 interacting protein","termid":"PBO:0039702"}


id: PBO:0004634
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.7.13","termid":"PBO:0004634"}


id: PBO:0048429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GALNT8 antisense upstream 1","termid":"PBO:0048429"}


id: GO:2000427
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of apoptotic cell clearance.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of phagocytosis","termid":"GO:0050766"},{"relation_name":"is_a","term_name":"regulation of apoptotic cell clearance","termid":"GO:2000425"},{"relation_name":"positively_regulates","term_name":"apoptotic cell clearance","termid":"GO:0043277"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of apoptotic cell clearance","synonyms":[{"name":"positive regulation of apoptotic cell removal","type":"exact"},{"name":"positive regulation of efferocytosis","type":"exact"},{"name":"positive regulation of programmed cell clearance","type":"exact"}],"termid":"GO:2000427"}


id: GO:0018657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: toluene + 1/2 O2 = 3-hydroxytoluene.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete toluene 3-monooxygenase activity (obsolete GO:0018657)","termid":"GO:0018657"}


id: GO:0120301
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (L-lysyl-[histone] + lactoyl-CoA = CoA + H+ + N(6)-lactoyl-L-lysyl-[histone].","definition_xrefs":["PMID:31645732","GOC:sp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide lactyltransferase (CoA-dependent) activity","termid":"GO:0120300"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016746","GO:0140096","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"histone lactyltransferase (CoA-dependent) activity","synonyms":[{"name":"histone lactyltransferase (CoA dependent) activity","type":"exact"},{"name":"histone lactyltransferase activity","type":"broad"},{"name":"histone lactyltransferase activity (CoA dependent)","type":"exact"}],"termid":"GO:0120301"}


id: MONDO:0018077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tularemia is an infection caused by the bacterium Francisella tularensis. It is more common in rodents and rabbits but has been found in other animals including domestic cats, sheep, birds, and hamsters. Humans can become infected in several different ways: by handling infected animals, through tick or deer fly bites, by drinking contaminated water, or by inhaling contaminated dust or aerosols. Person-to-person transmission has not been reported. The type of tularemia and the particular signs and symptoms vary depending on how the bacteria enter the body. However, fever is seen in most cases. Though tularemia can be life-threatening, most infections can be treated with antibiotics.","direct_ancestors":[{"relation_name":"is_a","term_name":"primary bacterial infectious disease","termid":"MONDO:0000314"},{"relation_name":"is_a","term_name":"vector-borne disease","termid":"MONDO:0100120"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tularemia","secondary_identifiers":["MESH:D014406","ICD9:021.9","ICD9:021.8","Orphanet:3392","SCTID:19265001","UMLS:C0041351","ICD10CM:A21","EFO:1001444","NCIT:C85208","MEDGEN:22520","MedDRA:10045146","NORD:1803","GARD:396","DOID:2123"],"synonyms":[{"name":"Deerfly fever","type":"related"},{"name":"Francisella tularensis caused disease or disorder","type":"exact"},{"name":"Francisella tularensis disease or disorder","type":"exact"},{"name":"Francisella tularensis infection","type":"related"},{"name":"Francisella tularensis infectious disease","type":"exact"},{"name":"Ohara disease","type":"related"},{"name":"Pahvant Valley plague","type":"related"},{"name":"Yatobyo (Japan)","type":"related"},{"name":"lemming fever","type":"related"},{"name":"rabbit fever","type":"related"}],"termid":"MONDO:0018077","xrefs":{"Monarch":{"xref_id":"0018077"}}}


id: PBO:0003412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase catalytic subunit","termid":"PBO:0003412"}


id: GO:0003877
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ADP + ATP = phosphate + P(1),P(4)-bis(5'-adenosyl)tetraphosphate.","definition_xrefs":["EC:2.7.7.53"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adenylyltransferase activity","termid":"GO:0070566"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0016779","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"ATP:ADP adenylyltransferase activity","secondary_identifiers":["MetaCyc:ATP-ADENYLYLTRANSFERASE-RXN","RHEA:16577"],"synonyms":[{"name":"AP-4-A phosphorylase activity","type":"related"},{"name":"ATP adenylyltransferase activity","type":"broad"},{"name":"adenine triphosphate adenylyltransferase activity","type":"related"},{"name":"bis(5'-nucleosyl)-tetraphosphate phosphorylase (NDP-forming) activity","type":"related"},{"name":"diadenosine 5',5'''-P(1),P(4)-tetraphosphate phosphorylase activity","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate alphabeta-phosphorylase (ADP-forming)","type":"related"},{"name":"diadenosine 5',5'''-P1,P4-tetraphosphate phosphorylase activity","type":"related"},{"name":"diadenosinetetraphosphate alpha-beta-phosphorylase activity","type":"related"},{"name":"diadenosinetetraphosphate alphabeta-phosphorylase activity","type":"related"},{"name":"dinucleoside oligophosphate alphabeta-phosphorylase activity","type":"related"}],"termid":"GO:0003877"}


id: MONDO:1012676
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary chondrodysplasia that occurs in sheep due to a mutation in the SLC13A1 gene.","definition_xrefs":["PMID:22742499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteochondrodysplasia, non-human animal","termid":"MONDO:1010306"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondrodysplasia, SLC13A1-related, sheep","secondary_identifiers":["OMIA:001400-9940"],"termid":"MONDO:1012676","xrefs":{"Monarch":{"xref_id":"1012676"}}}


id: PBO:0072048
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S10 pseudogene 18","termid":"PBO:0072048"}


id: PBO:0048466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GCLC antisense RNA 1","termid":"PBO:0048466"}


id: MONDO:0011779
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"laryngeal atresia, encephalocele, and limb deformities","secondary_identifiers":["MEDGEN:335504","OMIM:607132","MESH:C564620","UMLS:C1846721"],"synonyms":[{"name":"Lel","type":"related"},{"name":"laryngeal atresia, encephalocele, and limb deformities","type":"exact"}],"termid":"MONDO:0011779","xrefs":{"Monarch":{"xref_id":"0011779"}}}


id: GO:0052722
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: fatty acid + O2 + 2 NADPH + H+ = fatty acid with in-chain hydroxy group + 2 NADP+ + H2O.","definition_xrefs":["MetaCyc:RXN-12186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"fatty acid in-chain hydroxylase activity","secondary_identifiers":["RHEA:45084"],"termid":"GO:0052722"}


id: PBO:0055526
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2960","termid":"PBO:0055526"}


id: PBO:0070286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, variant U1 small nuclear 27","termid":"PBO:0070286"}


id: FYPO:0004107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during G2 phase of the mitotic cell cycle is normal (i.e. indistinguishable from wild type). Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"},{"relation_name":"is_a","term_name":"altered protein level during vegetative growth","termid":"FYPO:0001325"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0005447","FYPO:0006551","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal protein level during mitotic G2 phase","synonyms":[{"name":"normal protein accumulation during mitotic G2 phase","type":"related"},{"name":"normal protein level during G2 phase of mitotic cell cycle","type":"related"},{"name":"normal protein level during mitotic G2 phase during vegetative growth","type":"exact"}],"termid":"FYPO:0004107"}


id: MONDO:0012372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hypertrichosis, hyperkeratosis, mental retardation, and distinctive facial features (obsolete MONDO:0012372)","termid":"MONDO:0012372","xrefs":{"Monarch":{"xref_id":"0012372"}}}


id: PBO:0111849
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PUA domain","termid":"PBO:0111849"}


id: GO:0044126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont regulates the increase in its size or mass within the cells or tissues of the host organism. This may (but not necessarily) include a filamentous growth form, and also can include secretion of proteases and lipases to break down. The host is defined as the larger of the organisms involved in the symbiotic interaction.","definition_xrefs":["GOC:jl","GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of growth of symbiont in host (obsolete GO:0044126)","termid":"GO:0044126"}


id: MONDO:0013558
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Hermansky-Pudlak syndrome in which the cause of the disease is a mutation in the HPS6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Hermansky-Pudlak syndrome without pulmonary fibrosis","termid":"MONDO:0016502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005066","MONDO:0005093"],"is_obsolete":false,"name":"Hermansky-Pudlak syndrome 6","secondary_identifiers":["DOID:0060544","MEDGEN:854714","UMLS:C3888007","NCIT:C150369","OMIM:614075","GARD:18335"],"synonyms":[{"name":"HPS6","type":"related"},{"name":"HPS6 Hermansky-Pudlak syndrome","type":"exact"},{"name":"Hermansky-Pudlak syndrome 6","type":"exact"},{"name":"Hermansky-Pudlak syndrome caused by mutation in HPS6","type":"exact"},{"name":"Hermansky-Pudlak syndrome type 6","type":"exact"}],"termid":"MONDO:0013558","xrefs":{"Monarch":{"xref_id":"0013558"}}}


id: PBO:0038766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ACTR3 pseudogene 3","termid":"PBO:0038766"}


id: PBO:0055801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lysophosphatidic acid receptor 3","termid":"PBO:0055801"}


id: PBO:0061951
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 3 pseudogene","termid":"PBO:0061951"}


id: PBO:0072392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS27A pseudogene 18","termid":"PBO:0072392"}


id: GO:0008534
data:
  {"annotated_genes":["SJAG_01119","SJAG_02261","SJAG_03724"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76247,75514,98162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034039"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of oxidized purine bases by cleaving the N-C1' glycosidic bond between the oxidized purine and the deoxyribose sugar. The reaction involves the formation of a covalent enzyme-substrate intermediate. Release of the enzyme and free base by a beta-elimination or a beta, gamma-elimination mechanism results in the cleavage of the DNA backbone 3' of the apurinic (AP) site.","definition_xrefs":["PMID:11554296","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidized base lesion DNA N-glycosylase activity","termid":"GO:0000702"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01119":null,"SJAG_02261":null,"SJAG_03724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016798","GO:0003824","GO:0016787","GO:0140097","GO:0003674"],"is_obsolete":false,"name":"oxidized purine nucleobase lesion DNA N-glycosylase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0003907","EC:3.2.2.23","Reactome:R-HSA-110244","Reactome:R-HSA-110229","MetaCyc:3.2.2.23-RXN","Reactome:R-HSA-110243"],"synonyms":[{"name":"2,6-diamino-4-hydroxy-5(N-methyl)formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"2,6-diamino-4-hydroxy-5N-formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"8-oxoguanine DNA glycosylase activity","type":"broad"},{"name":"DNA glycohydrolase [2,6-diamino-4-hydroxy-5-(N-methyl)formamidopyrimide releasing]","type":"related"},{"name":"DNA glycosylase/AP-lyase activity","type":"broad"},{"name":"DNA glycosylase/beta-lyase activity","type":"broad"},{"name":"DNA-formamidopyrimidine glycosylase activity","type":"related"},{"name":"Fapy-DNA glycosylase activity","type":"related"},{"name":"Fpg protein","type":"related"},{"name":"bifunctional DNA glycosylase activity","type":"broad"},{"name":"deoxyribonucleate glycosidase activity","type":"related"},{"name":"formamidopyrimidine-DNA glycosylase activity","type":"related"},{"name":"oxidized purine base lesion DNA N-glycosylase activity","type":"exact"},{"name":"purine-specific oxidized base lesion DNA N-glycosylase activity","type":"related"}],"termid":"GO:0008534","terms_by_termid":{"GO:0034039":null}}


id: PBO:0058150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4445","termid":"PBO:0058150"}


id: PR:Q9Y7R8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A malate dehydrogenase, mitochondrial that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04306","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malate dehydrogenase, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC306.08c","secondary_identifiers":["UniProtKB:Q9Y7R8"],"synonyms":[{"name":"Spom972h-MDH2","type":"exact"}],"termid":"PR:Q9Y7R8"}


id: PBO:0050209
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosome binding domain 1 pseudogene 26","termid":"PBO:0050209"}


id: GO:0005837
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A large multisubunit protease found in the cytosol that recognizes, unfolds, and digests protein substrates that have been marked for degradation by the attachment of a ubiquitin group. Individual subcomplexes of the complete 26S proteasome are involved in these different tasks: the ATP-dependent 19S caps are believed to unfold substrates and feed them to the actual protease, the 20S proteasome.","definition_xrefs":["PMID:10410804"],"gene_count":0,"genotype_count":0,"name":"obsolete 26S proteasome (obsolete GO:0005837)","synonyms":[{"name":"26S proteasome","type":"exact"}],"termid":"GO:0005837"}


id: PBO:0048597
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone receptor","termid":"PBO:0048597"}


id: MONDO:0008832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A visceral heterotaxy characterized by complete atrioventricular septal defect with a common atrium and univentricular AV connection, total anomalous pulmonary drainage, and transposition or malposition of the great arteries and may be associated with bilateral trilobed lungs, midline liver, asplenia and situs inversus affecting other organs that has material basis in homozygous mutation in the GDF1 gene on chromosome 19p12.","definition_xrefs":["PMID:14648004","DOID:0060856","PMID:20413652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"visceral heterotaxy","termid":"MONDO:0018677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"right atrial isomerism","secondary_identifiers":["OMIM:208530","UMLS:C3178806","Orphanet:97548","GARD:6795","NORD:1305","MedDRA:10068335","MEDGEN:465274","HP:0011536"],"synonyms":[{"name":"Ivemark Syndrome","type":"exact"},{"name":"Ivemark syndrome","type":"exact"},{"name":"Polyasplenia","type":"related"},{"name":"RAI","type":"related"},{"name":"Vah, autosomal recessive","type":"related"},{"name":"asplenia syndrome","type":"related"},{"name":"asplenia with cardiovascular anomalies","type":"exact"},{"name":"bilateral right-sidedness sequence","type":"related"},{"name":"heterotaxy, Visceroatrial, autosomal recessive","type":"related"},{"name":"polysplenia syndrome","type":"related"},{"name":"right atrial isomerism","type":"exact"},{"name":"right atrial isomerism (disease)","type":"exact"},{"name":"right atrial isomerism (ivemark)","type":"exact"},{"name":"right isomerism","type":"related"},{"name":"splenic agenesis syndrome","type":"related"}],"termid":"MONDO:0008832","xrefs":{"Monarch":{"xref_id":"0008832"}}}


id: PBO:0082465
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Calcium-binding component of the spindle pole body (SPB) half-bridge; required for SPB duplication in mitosis and meiosis II; homolog of mammalian centrin; binds multiubiquitinated proteins and is involved in proteasomal protein degradation","termid":"PBO:0082465"}


id: GO:0042779
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cleavage of the 3'-end of the pre-tRNA as part of the process of generating the mature 3'-end of the tRNA; may involve endonucleolytic or exonucleolytic cleavage, or both.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete tRNA 3'-trailer cleavage (obsolete GO:0042779)","synonyms":[{"name":"removal of tRNA 3'-trailer sequence","type":"exact"},{"name":"tRNA 3'-end cleavage","type":"exact"}],"termid":"GO:0042779"}


id: GO:0060122
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id: PBO:0000717
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  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.2.1.39","termid":"PBO:0000717"}


id: GO:0051970
data:
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id: GO:0045786
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