# terms

id: PBO:0048910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"golgin A8 family member E, pseudogene","termid":"PBO:0048910"}


id: PBO:0051251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (III)-11-1 (pseudogene)","termid":"PBO:0051251"}


id: PBO:0061747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NXT1 antisense RNA 1","termid":"PBO:0061747"}


id: MONDO:0035009
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"thrombotic disease","termid":"MONDO:0000831"},{"relation_name":"is_a","term_name":"vein disorder","termid":"MONDO:0004634"},{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"isolated mesenteric vein thrombosis","secondary_identifiers":["Orphanet:583861","icd11.foundation:213868120","GARD:22339"],"termid":"MONDO:0035009","xrefs":{"Monarch":{"xref_id":"0035009"}}}


id: FYPO:0001729
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-cysteine measured in the vacuole is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in vacuole","termid":"FYPO:0001603"},{"relation_name":"is_a","term_name":"normal cellular cysteine level","termid":"FYPO:0001726"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal vacuolar cysteine level","synonyms":[{"name":"normal level of cysteine in vacuole","type":"exact"},{"name":"normal vacuolar L-cysteine level","type":"exact"},{"name":"normal vacuolar cysteine level during mitotic cell cycle","type":"related"},{"name":"normal vacuolar cysteine level during vegetative growth","type":"exact"}],"termid":"FYPO:0001729"}


id: PBO:0116709
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily J member 3 (gene/pseudogene)","termid":"PBO:0116709"}


id: GO:0010720
data:
  {"annotated_genes":["SJAG_02169","SJAG_03581","SJAG_02392","SJAG_00514","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96589,91875,97858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051519"},{"annotations":[104304],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0075296"},{"annotations":[92735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903024"}]},"cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of the progression of the cell over time, from its formation to the mature structure. Cell development does not include the steps involved in committing a cell to a specific fate.","definition_xrefs":["GOC:BHF","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell differentiation","termid":"GO:0045597"},{"relation_name":"is_a","term_name":"regulation of cell development","termid":"GO:0060284"},{"relation_name":"positively_regulates","term_name":"cell development","termid":"GO:0048468"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_03581":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell development","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0010720","terms_by_termid":{"GO:0051519":null,"GO:0075296":null,"GO:1903024":null}}


id: GO:0099163
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell-cell signaling to or from a synapse, mediated by nitric oxide.","definition_xrefs":["PMID:19038221","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synaptic signaling","termid":"GO:0099536"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"synaptic signaling by nitric oxide","termid":"GO:0099163"}


id: GO:0001808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of type IV hypersensitivity, a type of inflammatory response.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IV hypersensitivity","termid":"GO:0001807"},{"relation_name":"is_a","term_name":"negative regulation of T cell mediated immunity","termid":"GO:0002710"},{"relation_name":"is_a","term_name":"negative regulation of hypersensitivity","termid":"GO:0002884"},{"relation_name":"negatively_regulates","term_name":"type IV hypersensitivity","termid":"GO:0001806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of type IV hypersensitivity","synonyms":[{"name":"down regulation of type IV hypersensitivity","type":"exact"},{"name":"down-regulation of type IV hypersensitivity","type":"exact"},{"name":"downregulation of type IV hypersensitivity","type":"exact"},{"name":"inhibition of type IV hypersensitivity","type":"narrow"}],"termid":"GO:0001808"}


id: PBO:0056242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mago homolog 3, pseudogene","termid":"PBO:0056242"}


id: PBO:0085734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in threonylcarbamoyl adenosine biosynthesis; Sua5p and Qri7p are necessary and sufficient for RNA t6A modification in vitro; highly conserved mitochondrial protein; essential for t6A modification of mitochondrial tRNAs that decode ANN codons; similar to Kae1p and E. coli YgjD, both of which are also required for tRNA t6A modification; when directed to the cytoplasm, complements the essential function of Kae1p in the KEOPS complex","termid":"PBO:0085734"}


id: FYPO:0000230
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cytokinesis phenotype observed in the vegetative growth phase of the life cycle in which the assembly and distribution of actin filaments and associated proteins does not occur normally, resulting in the formation of an abnormal actomyosin contractile ring in which actin is absent or mislocalized.","definition_xrefs":["GO:2000689","PMID:19713940","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cytokinesis during vegetative growth","termid":"FYPO:0000032"},{"relation_name":"is_a","term_name":"abnormal actin filament organization during vegetative growth","termid":"FYPO:0000727"},{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring organization","termid":"FYPO:0004738"},{"relation_name":"part_of","term_name":"abnormal actomyosin contractile ring assembly","termid":"FYPO:0000161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0000032"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"part_of","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0004803"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0005447","FYPO:0004803","FYPO:0001985","FYPO:0000032","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abnormal actomyosin contractile ring actin filament organization","synonyms":[{"name":"abnormal actomyosin contractile ring actin filament organisation","type":"exact"},{"name":"abnormal actomyosin contractile ring actin filament organization during mitotic cell cycle","type":"related"},{"name":"abnormal actomyosin contractile ring actin filament organization during vegetative growth","type":"exact"},{"name":"abnormal cytokinetic contractile ring actin filament organization","type":"exact"},{"name":"abnormal mitotic contractile ring actin filament organization","type":"exact"}],"termid":"FYPO:0000230"}


id: GO:1904136
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["GOC:dph","GOC:TermGenie","PMID:24892953","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of convergent extension involved in gastrulation","termid":"GO:1904103"},{"relation_name":"regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"}


id: MONDO:0003598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Disease involving the median nerve, from its origin at the brachial plexus to its termination in the hand. Clinical features include weakness of wrist and finger flexion, forearm pronation, thenar abduction, and loss of sensation over the lateral palm, first three fingers, and radial half of the ring finger. Common sites of injury include the elbow, where the nerve passes through the two heads of the pronator teres muscle (pronator syndrome) and in the carpal tunnel (carpal tunnel syndrome).","definition_xrefs":["MESH:D020423"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"neuritis of upper limb","termid":"MONDO:0003607"},{"relation_name":"is_a","term_name":"brachial plexus neuropathy","termid":"MONDO:0006683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"median nerve neuropathy","secondary_identifiers":["DOID:571","MEDGEN:199766","SCTID:397828008","UMLS:C0751922","ICD9:354.1"],"synonyms":[{"name":"median nerve palsy","type":"related"},{"name":"median nerve peripheral neuropathy","type":"exact"},{"name":"median neuropathy","type":"exact"},{"name":"peripheral neuropathy of median nerve","type":"exact"}],"termid":"MONDO:0003598","xrefs":{"Monarch":{"xref_id":"0003598"}}}


id: GO:0070931
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a Golgi-associated vesicle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"},{"relation_name":"part_of","term_name":"Golgi apparatus","termid":"GO:0005794"},{"relation_name":"part_of","term_name":"Golgi-associated vesicle","termid":"GO:0005798"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0031410","GO:0005794"],"is_obsolete":false,"name":"Golgi-associated vesicle lumen","termid":"GO:0070931"}


id: PBO:0090190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-binding transcription factor Pho7","termid":"PBO:0090190"}


id: GO:0002687
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of leukocyte migration.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of immune system process","termid":"GO:0002684"},{"relation_name":"is_a","term_name":"regulation of leukocyte migration","termid":"GO:0002685"},{"relation_name":"is_a","term_name":"positive regulation of cell migration","termid":"GO:0030335"},{"relation_name":"positively_regulates","term_name":"leukocyte migration","termid":"GO:0050900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of leukocyte migration","synonyms":[{"name":"activation of leukocyte migration","type":"narrow"},{"name":"positive regulation of immune cell migration","type":"exact"},{"name":"positive regulation of leucocyte migration","type":"exact"},{"name":"stimulation of leukocyte migration","type":"narrow"},{"name":"up regulation of leukocyte migration","type":"exact"},{"name":"up-regulation of leukocyte migration","type":"exact"},{"name":"upregulation of leukocyte migration","type":"exact"}],"termid":"GO:0002687"}


id: PBO:0072646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"replication termination factor 2","termid":"PBO:0072646"}


id: GO:0001995
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of norepinephrine or epinephrine in the bloodstream.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epinephrine catabolic process","termid":"GO:0042419"},{"relation_name":"part_of","term_name":"regulation of systemic arterial blood pressure by norepinephrine-epinephrine","termid":"GO:0001993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"norepinephrine-epinephrine catabolic process in blood stream","synonyms":[{"name":"noradrenaline-adrenalin catabolic process in blood stream","type":"exact"}],"termid":"GO:0001995"}


id: GO:0008287
data:
  {"annotated_genes":["SJAG_00229","SJAG_03353","SJAG_03631","SJAG_03126","SJAG_01187","SJAG_03681","SJAG_00534","SJAG_02536","SJAG_03500","SJAG_01906","SJAG_04638","SJAG_00078","SJAG_01599","SJAG_01270","SJAG_04968","SJAG_03940","SJAG_00600","SJAG_00823","SJAG_03793","SJAG_00526","SJAG_00369"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[117541,120012],"is_not":false,"summary":null,"term":"GO:0008287"},{"annotations":[81501,75007],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005955"},{"annotations":[114007,120290,102320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990567"},{"annotations":[111774,114803],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071595"},{"annotations":[74580,109439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030289"},{"annotations":[94988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000164"},{"annotations":[106517,63855,77786,66321,80190,73059,73668],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000159"},{"annotations":[71031,99707,118646],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072357"}]},"cv_name":"cellular_component","definition":"A complex, normally consisting of a catalytic and a regulatory subunit, which catalyzes the removal of a phosphate group from a serine or threonine residue of a protein.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase complex","termid":"GO:1903293"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00078":null,"SJAG_00229":null,"SJAG_00369":null,"SJAG_00526":null,"SJAG_00534":null,"SJAG_00600":null,"SJAG_00823":null,"SJAG_01187":null,"SJAG_01270":null,"SJAG_01599":null,"SJAG_01906":null,"SJAG_02536":null,"SJAG_03126":null,"SJAG_03353":null,"SJAG_03500":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03793":null,"SJAG_03940":null,"SJAG_04638":null,"SJAG_04968":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"protein serine/threonine phosphatase complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0008287","terms_by_termid":{"GO:0000159":null,"GO:0000164":null,"GO:0005955":null,"GO:0008287":null,"GO:0030289":null,"GO:0071595":null,"GO:0072357":null,"GO:1990567":null}}


id: PBO:0063644
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 1","termid":"PBO:0063644"}


id: PBO:0000297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone fold","termid":"PBO:0000297"}


id: MONDO:0024468
data:
  {"annotated_genes":["SJAG_03429"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88717],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009050"}]},"cv_name":"mondo","definition":"A disease that involves the adenohypophysis.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pituitary gland disorder","termid":"MONDO:0003381"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03429":null},"genotype_count":0,"is_obsolete":false,"name":"anterior pituitary gland disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:148306","UMLS:C0751437","ICD9:253.9","ICD9:253.4","SCTID:51742006"],"synonyms":[{"name":"adenohypophysis disease","type":"exact"},{"name":"adenohypophysis disease or disorder","type":"exact"},{"name":"disease of adenohypophysis","type":"exact"},{"name":"disease or disorder of adenohypophysis","type":"exact"},{"name":"disorder of adenohypophysis","type":"exact"},{"name":"disorder of anterior pituitary","type":"exact"},{"name":"disorder of anterior pituitary gland","type":"related"}],"termid":"MONDO:0024468","terms_by_termid":{"MONDO:0009050":null},"xrefs":{"Monarch":{"xref_id":"0024468"}}}


id: PBO:0055050
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2465","termid":"PBO:0055050"}


id: PBO:0061560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'-nucleotidase domain containing 2","termid":"PBO:0061560"}


id: PBO:0088966
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CENP-L ortholog Fta1","termid":"PBO:0088966"}


id: PBO:0026997
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_DNA_binding_at_PCB","termid":"PBO:0026997"}


id: MONDO:0012448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any hereditary spastic paraplegia in which the cause of the disease is a mutation in the ZFYVE27 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary spastic paraplegia","termid":"MONDO:0019064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 33","secondary_identifiers":["MESH:C565214","OMIM:610244","MEDGEN:339943","DOID:0110784","UMLS:C1853251"],"synonyms":[{"name":"SPG33","type":"exact"},{"name":"ZFYVE27 hereditary spastic paraplegia","type":"exact"},{"name":"autosomal dominant spastic paraplegia 33","type":"exact"},{"name":"hereditary spastic paraplegia caused by mutation in ZFYVE27","type":"exact"},{"name":"hereditary spastic paraplegia type 33","type":"exact"},{"name":"spastic paraplegia 33, autosomal dominant","type":"related"}],"termid":"MONDO:0012448","xrefs":{"Monarch":{"xref_id":"0012448"}}}


id: GO:1902028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of histone H3-K18 acetylation.","definition_xrefs":["PMID:22110608","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of histone H3-K18 acetylation (obsolete GO:1902028)","synonyms":[{"name":"regulation of histone H3 acetylation at K18","type":"exact"},{"name":"regulation of histone H3K18 acetylation","type":"exact"}],"termid":"GO:1902028"}


id: MONDO:0003983
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Carcinoma that is detected in one breast within two months from the diagnosis of carcinoma in the other breast.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bilateral breast carcinoma","termid":"MONDO:0003982"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"synchronous bilateral breast carcinoma","secondary_identifiers":["NCIT:C40370","MEDGEN:271163","UMLS:C1515107","DOID:6742"],"termid":"MONDO:0003983","xrefs":{"Monarch":{"xref_id":"0003983"}}}


id: RO:HOM0000036
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Historical homology that involves two members of a larger set of homologs.","direct_ancestors":[{"relation_name":"is_a","term_name":"in_historical_homology_relationship_with","termid":"RO:HOM0000007"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in_many_to_many_homology_relationship_with","synonyms":[{"name":"many to many homologous to","type":"exact"},{"name":"many-to-many homology","type":"exact"},{"name":"many:many homology ","type":"exact"}],"termid":"RO:HOM0000036"}


id: GO:0141190
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A G protein-coupled receptor signaling pathway that starts with an opsin molecule being activated by a photon. Opsins include rhodopsin and others visual receptors bind heterotrimeric transducin G proteins upon activation. Activated transducin alpha-subunit activates cGMP phosphodiesterase, which breaks down cGMP. The decrease in cGMP concentration leads to closure of cGMP-gated (CNG) channels, blockage of Na+ influx, and hyperpolarization of photoreceptor plasma membrane, leading to transmission of signal through synapses. The signal is terminated by phosphorylation of the C-terminal tail of rhodopsin by rhodopsin kinase to allow arrestin to bind and block G protein binding. Typical examples are rhabdomeric photoreceptors in the eyes of deuterostomes.","definition_xrefs":["PMID:36499010","PMID:37159291","PMID:36272560","PMID:19720651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled opsin signaling pathway","termid":"GO:0016056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"transducin-mediated opsin signaling pathway","synonyms":[{"name":"Gt-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated opsin signaling pathway","type":"exact"},{"name":"cGMP-mediated rhodopsin signaling pathway","type":"narrow"},{"name":"ciliary opsin-mediated signaling pathway","type":"exact"},{"name":"cyclic-GMP-mediated opsin signaling pathway","type":"exact"},{"name":"cyclic-nucleotide-mediated opsin signaling pathway","type":"exact"}],"termid":"GO:0141190"}


id: FYPO:0002184
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"OBSOLETE. A mixed population phenotype in which all cells in a population are inviable, and the population includes a mixture of ungerminated spores, germinated spores and tapered vegetative cells. The tapered cells arise from division of some of the germinated spores, and may form a microcolony of up to 64 cells.","definition_xrefs":["PomBase:mah","PomBase:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete inviable mixed population including spores, germinated spores and tapered cells (obsolete FYPO:0002184)","synonyms":[{"name":"inviable mixed population including spores, germinated spores and bottle/skittle cells","type":"exact"},{"name":"inviable mixed population including spores, germinated spores and skittle-shaped cells","type":"exact"}],"termid":"FYPO:0002184"}


id: MONDO:0007835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Telescoping or invagination of a part of the intestine into an adjacent segment.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"intestinal obstruction","termid":"MONDO:0004565"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"intussusception","secondary_identifiers":["MEDGEN:43940","UMLS:C0021933","SCTID:49723003","ICD9:560.0","OMIM:147710","ICD10CM:K56.1","DOID:8446","MESH:D007443"],"synonyms":[{"name":"intussusception","type":"exact"},{"name":"intussusception (morphologic abnormality)","type":"exact"},{"name":"intussusception of intestine","type":"exact"},{"name":"invagination of intestine or colon","type":"exact"}],"termid":"MONDO:0007835","xrefs":{"Monarch":{"xref_id":"0007835"}}}


id: GO:0101026
data:
  {"annotated_genes":["SJAG_04883","SJAG_04319","SJAG_04509","SJAG_04972","SJAG_03313","SJAG_03219"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89901,95066,99696,100364,111958,112372],"is_not":false,"summary":null,"term":"GO:0101026"}]},"cv_name":"biological_process","definition":"A process in which the nuclear inner or outer membrane is synthesized, aggregates, and bonds together during mitotic nuclear division.","definition_xrefs":["GOC:vw","PMID:26869222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane organization","termid":"GO:0061024"},{"relation_name":"is_a","term_name":"nuclear membrane biogenesis","termid":"GO:0101025"},{"relation_name":"is_a","term_name":"mitotic cell cycle process","termid":"GO:1903047"},{"relation_name":"part_of","term_name":"mitotic nuclear division","termid":"GO:0140014"}],"gene_count":6,"genes_by_uniquename":{"SJAG_03219":null,"SJAG_03313":null,"SJAG_04319":null,"SJAG_04509":null,"SJAG_04883":null,"SJAG_04972":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0044085","GO:0061024"],"is_obsolete":false,"name":"mitotic nuclear membrane biogenesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"nuclear membrane biogenesis involved in mitotic nuclear division","type":"exact"}],"termid":"GO:0101026","terms_by_termid":{"GO:0101026":null}}


id: PBO:0083002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Damaged-DNA binding subunit of Nuclear Excision Repair Factor 2; recognizes and binds damaged DNA with Rad23p during nucleotide excision repair (NER); also involved with Rad23p in turnover of ubiquitylated proteins; Rad4p-Rad23p heterodimer binds to promoters of DNA damage response genes to repress their transcription in the absence of DNA damage; RAD4 and RAD51 pathways confer resistance to benzo[a]pyrene dihydrodiol","termid":"PBO:0083002"}


id: GO:0052344
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a symbiont activates, maintains or increases the frequency, rate or extent of the production of phytoalexins as part of the defense response of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host phytoalexin production (obsolete GO:0052344)","synonyms":[{"name":"activation by symbiont of host phytoalexin production","type":"narrow"},{"name":"positive regulation by organism of phytoalexin production in other organism involved in symbiotic interaction","type":"broad"},{"name":"stimulation by symbiont of host phytoalexin production","type":"narrow"},{"name":"up regulation by symbiont of host phytoalexin production","type":"exact"},{"name":"up-regulation by symbiont of host phytoalexin production","type":"exact"},{"name":"upregulation by symbiont of host phytoalexin production","type":"exact"}],"termid":"GO:0052344"}


id: MONDO:0014455
data:
  {"annotated_genes":["SJAG_04285"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88856],"is_not":false,"summary":null,"term":"MONDO:0014455"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary endocrine growth disease","termid":"MONDO:0015514"},{"relation_name":"is_a","term_name":"mitochondrial oxidative phosphorylation disorder","termid":"MONDO:0016387"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"hereditary peripheral neuropathy","termid":"MONDO:0020127"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"},{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0005244","MONDO:0005497"],"is_obsolete":false,"name":"cataract-growth hormone deficiency-sensory neuropathy-sensorineural hearing loss-skeletal dysplasia syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4014942","Orphanet:436174","MEDGEN:863379","GARD:17727","OMIM:616007"],"synonyms":[{"name":"CAGSSS","type":"exact"},{"name":"cataracts, growth hormone deficiency, sensory neuropathy, sensorineural hearing loss, and skeletal dysplasia","type":"related"}],"termid":"MONDO:0014455","terms_by_termid":{"MONDO:0014455":null},"xrefs":{"Monarch":{"xref_id":"0014455"}}}


id: MONDO:1012949
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alzheimer disease that occurs in dogs due to a mutation in the APP gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"Alzheimer disease, dog","termid":"MONDO:1011461"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alzheimer disease, APP-related, dog","secondary_identifiers":["OMIA:002538-9615"],"termid":"MONDO:1012949","xrefs":{"Monarch":{"xref_id":"1012949"}}}


id: FYPO:0002656
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the binding of a protein to one or more actin filaments occurs to a lower extent than normal. The affected protein may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein-protein interaction","termid":"FYPO:0001645"},{"relation_name":"is_a","term_name":"abnormal protein complex binding","termid":"FYPO:0003591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000702","FYPO:0000652"],"is_obsolete":false,"name":"decreased actin filament binding","synonyms":[{"name":"decreased F-actin binding","type":"exact"},{"name":"decreased filamentous actin binding","type":"related"},{"name":"decreased protein-protein interaction with actin filament","type":"exact"},{"name":"reduced actin filament binding","type":"exact"}],"termid":"FYPO:0002656"}


id: GO:0097756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that decreases the diameter of blood vessels.","definition_xrefs":["GOC:pr"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of blood vessel diameter (obsolete GO:0097756)","synonyms":[{"name":"negative regulation of vasodilation","type":"related"}],"termid":"GO:0097756"}


id: PBO:0089378
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyruvate dehydrogenase e1 component alpha subunit Pda1","termid":"PBO:0089378"}


id: PBO:0047965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(X)(q22.1) C","termid":"PBO:0047965"}


id: GO:1900721
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of uterine smooth muscle relaxation.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of uterine smooth muscle relaxation","termid":"GO:1900719"},{"relation_name":"is_a","term_name":"positive regulation of relaxation of smooth muscle","termid":"GO:1901082"},{"relation_name":"positively_regulates","term_name":"uterine smooth muscle relaxation","termid":"GO:0044558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of uterine smooth muscle relaxation","synonyms":[{"name":"activation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"activation of uterine smooth muscle relaxation","type":"narrow"},{"name":"positive regulation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"up regulation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"up regulation of uterine smooth muscle relaxation","type":"exact"},{"name":"up-regulation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"up-regulation of uterine smooth muscle relaxation","type":"exact"},{"name":"upregulation of smooth muscle relaxation of the uterus","type":"exact"},{"name":"upregulation of uterine smooth muscle relaxation","type":"exact"}],"termid":"GO:1900721"}


id: PBO:0049168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein 2","termid":"PBO:0049168"}


id: PBO:0066636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RIMS binding protein 3B","termid":"PBO:0066636"}


id: MONDO:0011550
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibromatosis, gingival, with hypertrichosis and intellectual disability","secondary_identifiers":["OMIM:605400","UMLS:C1854306","MESH:C565331","MEDGEN:344255"],"synonyms":[{"name":"fibromatosis, gingival, with hypertrichosis and intellectual disability","type":"exact"},{"name":"fibromatosis, gingival, with hypertrichosis and mental retardation","type":"exact"}],"termid":"MONDO:0011550","xrefs":{"Monarch":{"xref_id":"0011550"}}}


id: PBO:0074293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcolemma associated protein","termid":"PBO:0074293"}


id: PBO:0052374
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 19","termid":"PBO:0052374"}


id: GO:0046413
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of organomercury compounds, any organic compound containing a mercury atom.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete organomercury catabolic process (obsolete GO:0046413)","synonyms":[{"name":"organomercury breakdown","type":"exact"},{"name":"organomercury catabolism","type":"exact"},{"name":"organomercury degradation","type":"exact"}],"termid":"GO:0046413"}


id: PBO:0083830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ethanol acetyltransferase; green fluorescent protein (GFP)-fusion protein localizes to the mitochondrion","termid":"PBO:0083830"}


id: GO:0070636
data:
  {"annotated_genes":["SJAG_00957"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[92663],"is_not":false,"summary":null,"term":"GO:0070636"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: nicotinic acid riboside + H2O = nicotinic acid + D-ribose.","definition_xrefs":["GOC:mah","PMID:19001417"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing N-glycosyl compounds","termid":"GO:0016799"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00957":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"nicotinic acid riboside hydrolase activity","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"D-ribosylnicotinate hydrolase activity","type":"exact"},{"name":"D-ribosylnicotinic acid hydrolase activity","type":"exact"},{"name":"nicotinate ribonucleoside hydrolase activity","type":"exact"},{"name":"nicotinate riboside hydrolase activity","type":"exact"},{"name":"nicotinic acid ribonucleoside hydrolase activity","type":"exact"}],"termid":"GO:0070636","terms_by_termid":{"GO:0070636":null}}


id: PBO:0056740
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"METAP2 pseudogene 1","termid":"PBO:0056740"}


id: PBO:0027787
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_serine_phosphorylation","termid":"PBO:0027787"}


id: PBO:0073590
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SHMT1 pseudogene 1","termid":"PBO:0073590"}


id: PBO:0053013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"late endosomal/lysosomal adaptor, MAPK and MTOR activator 3","termid":"PBO:0053013"}


id: PBO:0079475
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"twinkle mtDNA helicase","termid":"PBO:0079475"}


id: GO:0004287
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Pro-Xaa > Ala-Xaa in oligopeptides.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete prolyl oligopeptidase activity (obsolete GO:0004287)","synonyms":[{"name":"endoprolylpeptidase activity","type":"related"},{"name":"post-proline cleaving enzyme activity","type":"related"},{"name":"post-proline endopeptidase activity","type":"related"},{"name":"proline endopeptidase activity","type":"related"},{"name":"proline-specific endopeptidase activity","type":"related"},{"name":"prolyl endopeptidase activity","type":"related"},{"name":"prolyl oligopeptidase activity","type":"exact"}],"termid":"GO:0004287"}


id: GO:0016925
data:
  {"annotated_genes":["SJAG_03843","SJAG_00604","SJAG_00727","SJAG_05032","SJAG_01776","SJAG_02503","SJAG_02082"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74454,74472,77402,77509,77626,99768,116704],"is_not":false,"summary":null,"term":"GO:0016925"}]},"cv_name":"biological_process","definition":"The process in which a SUMO protein (small ubiquitin-related modifier) is conjugated to a target protein via an isopeptide bond between the carboxy-terminus of SUMO with an epsilon-amino group of a lysine residue of the target protein.","definition_xrefs":["PMID:11265250","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine modification","termid":"GO:0018205"},{"relation_name":"is_a","term_name":"protein modification by small protein conjugation","termid":"GO:0032446"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00604":null,"SJAG_00727":null,"SJAG_01776":null,"SJAG_02082":null,"SJAG_02503":null,"SJAG_03843":null,"SJAG_05032":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein sumoylation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0016927","GO:0019947","GO:0019951","Reactome:R-HSA-2990846","Wikipedia:SUMO_protein","GO:0006485"],"synonyms":[{"name":"SUMO-protein conjugation","type":"exact"},{"name":"Smt3-protein conjugation","type":"related"},{"name":"Smt3p-protein conjugation","type":"related"},{"name":"protein sumolation","type":"exact"},{"name":"small ubiquitin-related protein 1 conjugation","type":"exact"},{"name":"sumoylation","type":"exact"}],"termid":"GO:0016925","terms_by_termid":{"GO:0016925":null}}


id: PBO:0005760
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthine synthase Dph5 (predicted)","termid":"PBO:0005760"}


id: GO:0099521
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Any ATPase coupled ion transmembrane transporter activity, occurring in the presynaptic membrane, that is involved in regulation of presynaptic membrane potential.","definition_xrefs":["PMID:17220883","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ATPase-coupled ion transmembrane transporter activity","termid":"GO:0042625"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of presynaptic membrane potential","synonyms":[{"name":"ATPase coupled ion transmembrane transporter activity involved in regulation of pre-synaptic membrane potential","type":"exact"},{"name":"ATPase-coupled ion transmembrane transporter activity involved in regulation of presynaptic membrane potential","type":"exact"}],"termid":"GO:0099521"}


id: PBO:0077311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 50A","termid":"PBO:0077311"}


id: MONDO:0018908
data:
  {"annotated_genes":["SJAG_00980","SJAG_02460"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88162,88161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011508"}]},"cv_name":"mondo","definition":"Distinct from Hodgkin lymphoma both morphologically and biologically, non-Hodgkin lymphoma (NHL) is characterized by the absence of Reed-Sternberg cells, can occur at any age, and usually presents as a localized or generalized lymphadenopathy associated with fever and weight loss. The clinical course varies according to the morphologic type. NHL is clinically classified as indolent, aggressive, or having a variable clinical course. NHL can be of B-or T-/NK-cell lineage.","definition_xrefs":["NCIT:C3211"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphoma","termid":"MONDO:0005062"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00980":null,"SJAG_02460":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"non-Hodgkin lymphoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:6160","EFO:0005952","Orphanet:547","DOID:0060060","MedDRA:10029547","UMLS:C0024305","ICDO:9591/3","MESH:D008228","ONCOTREE:NHL"],"synonyms":[{"name":"NHL","type":"exact"},{"name":"non-Hodgkin lymphoma","type":"exact"},{"name":"non-Hodgkin's lymphoma","type":"exact"},{"name":"non-Hodgkin's lymphoma (NHL)","type":"exact"},{"name":"non-Hodgkins lymphoma","type":"exact"}],"termid":"MONDO:0018908","terms_by_termid":{"MONDO:0011508":null},"xrefs":{"Monarch":{"xref_id":"0018908"}}}


id: MONDO:1012024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"peripheral axonopathy, non-human animal","termid":"MONDO:1011832"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peripheral axonopathy, domestic cat","secondary_identifiers":["OMIA:000099-9685"],"termid":"MONDO:1012024","xrefs":{"Monarch":{"xref_id":"1012024"}}}


id: PBO:0053033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LARGE antisense RNA 1","termid":"PBO:0053033"}


id: GO:0046812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to the surface of a host cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding","termid":"GO:0005488"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"host cell surface binding","termid":"GO:0046812"}


id: GO:0052531
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process by which an organism activates, maintains or increases the frequency, rate or extent of fluxes of calcium ions that occur as part of the defense response of a host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by organism of defense-related symbiont calcium ion flux (obsolete GO:0052531)","synonyms":[{"name":"positive regulation by organism of defense-related symbiont Ca2+ flux","type":"exact"},{"name":"positive regulation by organism of defense-related symbiont calcium ion flux","type":"exact"}],"termid":"GO:0052531"}


id: PBO:0066560
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulator of G protein signaling like 1","termid":"PBO:0066560"}


id: PBO:0041848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CASK interacting protein 2","termid":"PBO:0041848"}


id: PBO:0034628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleosome-dependent_ATPase_activity","termid":"PBO:0034628"}


id: MONDO:0002827
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete urinary system cancer (obsolete MONDO:0002827)","termid":"MONDO:0002827","xrefs":{"Monarch":{"xref_id":"0002827"}}}


id: FYPO:0002643
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing clotrimazole.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0002057","FYPO:0000003","FYPO:0000257","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on clotrimazole","synonyms":[{"name":"normal cell population growth in presence of clotrimazole","type":"exact"},{"name":"normal cell population growth on clotrimazole","type":"exact"},{"name":"normal cellular response to clotrimazole","type":"related"},{"name":"normal vegetative cell population growth on clotrimazole","type":"exact"}],"termid":"FYPO:0002643"}


id: MONDO:0017062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"isolated spina bifida","termid":"MONDO:0019351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"spina bifida aperta","secondary_identifiers":["SCTID:58557008","GARD:20951","Orphanet:268369","MEDGEN:181490","icd11.foundation:187581000","UMLS:C0917813"],"termid":"MONDO:0017062","xrefs":{"Monarch":{"xref_id":"0017062"}}}


id: FYPO:0000634
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the centromere of a chromosome does not occur.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to centromere during vegetative growth","synonyms":[{"name":"abolished protein localisation to centromere during vegetative growth","type":"exact"},{"name":"abolished protein localisation to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to centromere during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to chromosome, centric region during vegetative growth","type":"exact"},{"name":"abolished protein localization to chromosome, centromeric region during vegetative growth","type":"exact"},{"name":"protein absent from centromere during vegetative growth","type":"related"},{"name":"protein localization to centromere abolished during vegetative growth","type":"exact"}],"termid":"FYPO:0000634"}


id: PR:Q6LA56
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An NAD kinase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized kinase C3H5.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3H5.11","secondary_identifiers":["UniProtKB:Q6LA56"],"synonyms":[{"name":"Spom972h-NADK","type":"exact"}],"termid":"PR:Q6LA56"}


id: GO:0045329
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of carnitine (hydroxy-trimethyl aminobutyric acid), a compound that participates in the transfer of acyl groups across the inner mitochondrial membrane.","definition_xrefs":["GOC:jl","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino-acid betaine biosynthetic process","termid":"GO:0006578"},{"relation_name":"is_a","term_name":"carnitine metabolic process","termid":"GO:0009437"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"carnitine biosynthetic process","secondary_identifiers":["Reactome:R-HSA-71262"],"synonyms":[{"name":"carnitine anabolism","type":"exact"},{"name":"carnitine biosynthesis","type":"exact"},{"name":"carnitine formation","type":"exact"},{"name":"carnitine synthesis","type":"exact"},{"name":"vitamin Bt biosynthesis","type":"exact"},{"name":"vitamin Bt biosynthetic process","type":"exact"}],"termid":"GO:0045329"}


id: PBO:0080858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Yip1 interacting factor homolog A, membrane trafficking protein","termid":"PBO:0080858"}


id: GO:0070022
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A homodimeric receptor complex that consists of two TGF-beta receptor monomers.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete transforming growth factor beta receptor complex (obsolete GO:0070022)","synonyms":[{"name":"TGF-beta receptor complex","type":"broad"},{"name":"transforming growth factor beta receptor complex","type":"exact"}],"termid":"GO:0070022"}


id: GO:0003992
data:
  {"annotated_genes":["SJAG_01019"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[63463],"is_not":false,"summary":null,"term":"GO:0003992"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-oxoglutarate + N(2)-acetyl-L-ornithine = N-acetyl-L-glutamate 5-semialdehyde + L-glutamate.","definition_xrefs":["EC:2.6.1.11","RHEA:18049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01019":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016769","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"N2-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity","references_by_uniquename":{"GO_REF:0000003":null},"secondary_identifiers":["MetaCyc:ACETYLORNTRANSAM-RXN","KEGG_REACTION:R02283","GO:0047318"],"synonyms":[{"name":"2-N-acetyl-L-ornithine:2-oxoglutarate 5-aminotransferase activity","type":"related"},{"name":"ACOAT activity","type":"related"},{"name":"N(2)-acetylornithine 5-transaminase activity","type":"related"},{"name":"N-acetylornithine aminotransferase activity","type":"related"},{"name":"N-acetylornithine-delta-transaminase activity","type":"related"},{"name":"N2-acetyl-L-ornithine:2-oxoglutarate aminotransferase activity","type":"related"},{"name":"N2-acetylornithine 5-aminotransferase activity","type":"exact"},{"name":"N2-acetylornithine 5-transaminase activity","type":"related"},{"name":"acetylornithine 5-aminotransferase activity","type":"related"},{"name":"acetylornithine aminotransferase activity","type":"broad"},{"name":"acetylornithine delta-transaminase activity","type":"related"},{"name":"acetylornithine transaminase activity","type":"broad"},{"name":"succinylornithine aminotransferase activity","type":"broad"}],"termid":"GO:0003992","terms_by_termid":{"GO:0003992":null}}


id: MONDO:0022832
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital heart disease radio ulnar synostosis intellectual disability","termid":"MONDO:0022832","xrefs":{"Monarch":{"xref_id":"0022832"}}}


id: GO:0046426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of a receptor signaling pathway via JAK-STAT.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046425"},{"relation_name":"is_a","term_name":"negative regulation of receptor signaling pathway via STAT","termid":"GO:1904893"},{"relation_name":"negatively_regulates","term_name":"cell surface receptor signaling pathway via JAK-STAT","termid":"GO:0007259"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of receptor signaling pathway via JAK-STAT","secondary_identifiers":["GO:2000365"],"synonyms":[{"name":"down regulation of JAK-STAT cascade","type":"exact"},{"name":"down-regulation of JAK-STAT cascade","type":"exact"},{"name":"downregulation of JAK-STAT cascade","type":"exact"},{"name":"inhibition of JAK-STAT cascade","type":"narrow"},{"name":"negative regulation of STAT protein import into nucleus","type":"narrow"},{"name":"negative regulation of STAT protein nuclear translocation","type":"narrow"}],"termid":"GO:0046426"}


id: GO:0010865
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stipule over time, from its formation to the mature structure. A stipule is one of (usually) a pair of appendages at the bases of leaves in many broad-leaved angiosperms.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"},{"relation_name":"part_of","term_name":"leaf development","termid":"GO:0048366"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stipule development","termid":"GO:0010865"}


id: PBO:0073784
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 5 member 4 pseudogene 1","termid":"PBO:0073784"}


id: PBO:0083820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3 on lysine 4 and is required in transcriptional silencing near telomeres; WD40 beta propeller superfamily member and ortholog of mammalian WDR5","termid":"PBO:0083820"}


id: GO:0050740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine.","definition_xrefs":["RESID:AA0349"],"gene_count":0,"genotype_count":0,"name":"obsolete protein-FMN linkage via O3-riboflavin phosphoryl-L-threonine (obsolete GO:0050740)","termid":"GO:0050740"}


id: GO:0046351
data:
  {"annotated_genes":["SJAG_00182","SJAG_01531","SJAG_01209","SJAG_01427","SJAG_01862","SJAG_00129","SJAG_01646"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[110941,70191,69612,65811,62802,70989,63543],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005992"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of disaccharides, sugars composed of two monosaccharide units.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disaccharide metabolic process","termid":"GO:0005984"},{"relation_name":"is_a","term_name":"oligosaccharide biosynthetic process","termid":"GO:0009312"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00129":null,"SJAG_00182":null,"SJAG_01209":null,"SJAG_01427":null,"SJAG_01531":null,"SJAG_01646":null,"SJAG_01862":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"disaccharide biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"synonyms":[{"name":"disaccharide anabolism","type":"exact"},{"name":"disaccharide biosynthesis","type":"exact"},{"name":"disaccharide formation","type":"exact"},{"name":"disaccharide synthesis","type":"exact"}],"termid":"GO:0046351","terms_by_termid":{"GO:0005992":null}}


id: SO:0002197
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The pseudogene has arisen by reverse transcription of a mRNA into cDNA, followed by reintegration into the genome. Therefore, it has lost any intron/exon structure, and it might have a pseudo-polyA-tail.","direct_ancestors":[{"relation_name":"is_a","term_name":"pseudogenic_tRNA","termid":"SO:0000778"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"processed_pseudogenic_tRNA","synonyms":[{"name":"INSDC_feature:tRNA","type":"broad"},{"name":"INSDC_qualifier:processed","type":"exact"},{"name":"processed pseudogenic tRNA","type":"exact"}],"termid":"SO:0002197"}


id: MONDO:0004062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Uveal melanoma characterized by the presence of intermediate cells which are similar to but smaller than epithelioid cells.","definition_xrefs":["NCIT:C7989"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uveal melanoma","termid":"MONDO:0006486"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"intermediate cell type uveal melanoma","secondary_identifiers":["DOID:6992","UMLS:C0279693","MEDGEN:76016"],"synonyms":[{"name":"Intermediate cell type intraocular melanoma","type":"exact"},{"name":"Intermediate cell type uveal melanoma","type":"exact"},{"name":"intraocular mixed cell type melanoma","type":"related"},{"name":"mixed cell type uveal melanoma","type":"exact"}],"termid":"MONDO:0004062","xrefs":{"Monarch":{"xref_id":"0004062"}}}


id: GO:0140667
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of production of oxytocin.","definition_xrefs":["PMID:25096581"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of gene expression","termid":"GO:0010468"},{"relation_name":"regulates","term_name":"oxytocin production","termid":"GO:0036162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of oxytocin production","termid":"GO:0140667"}


id: PBO:0088919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BRCT and tudor domain DNA checkpoint protein Crb2","termid":"PBO:0088919"}


id: MONDO:0009321
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hallux varus-preaxial polysyndactyly syndrome is a rare, genetic, congenital limb malformation disorder characterized by bilateral medial displacement of the hallux and preaxial polysyndactyly of the first toes. Radiographs show broad, shortened, misshapen first metatarsals and may associate incomplete or complete duplication of proximal phalanges and duplication or triplication of distal phalanges. There have been no further descriptions in the literature since 1980.","definition_xrefs":["Orphanet:2110"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hallux varus-preaxial polysyndactyly syndrome","secondary_identifiers":["UMLS:C1856197","MEDGEN:341088","GARD:3118","OMIM:234280","MESH:C536885"],"synonyms":[{"name":"Kleiner Holmes syndrome","type":"related"},{"name":"Kleiner-Holmes syndrome","type":"exact"},{"name":"hallux varus and preaxial polysyndactyly","type":"related"}],"termid":"MONDO:0009321","xrefs":{"Monarch":{"xref_id":"0009321"}}}


id: PBO:0049158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4","termid":"PBO:0049158"}


id: GO:1905662
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of telomerase RNA reverse transcriptase activity.","definition_xrefs":["GOC:BHF","GOC:BHF_telomere","PMID:22633954","GO_REF:0000059","GOC:nc","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of telomerase RNA reverse transcriptase activity (obsolete GO:1905662)","synonyms":[{"name":"down regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"down regulation of telomerase, catalyst","type":"exact"},{"name":"down-regulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"down-regulation of telomerase, catalyst","type":"exact"},{"name":"downregulation of telomerase RNA reverse transcriptase activity","type":"exact"},{"name":"downregulation of telomerase, catalyst","type":"exact"},{"name":"inhibition of telomerase RNA reverse transcriptase activity","type":"narrow"},{"name":"inhibition of telomerase, catalyst","type":"narrow"},{"name":"negative regulation of telomerase, catalyst","type":"exact"}],"termid":"GO:1905662"}


id: FYPO:0001268
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to centromere during vegetative growth","termid":"FYPO:0000449"},{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore","termid":"FYPO:0005209"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during vegetative growth","synonyms":[{"name":"abnormal protein localisation to kinetochore during vegetative growth","type":"exact"},{"name":"abnormal protein localization to kinetochore during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001268"}


id: GO:1902157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of response to G2 DNA damage checkpoint signaling.","definition_xrefs":["GOC:TermGenie","GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to DNA damage checkpoint signaling","termid":"GO:1902153"},{"relation_name":"regulates","term_name":"response to G2 DNA damage checkpoint signaling","termid":"GO:0072426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of response to G2 DNA damage checkpoint signaling","synonyms":[{"name":"regulation of G2/M transition DNA damage checkpoint effector process","type":"exact"},{"name":"regulation of response to signal involved in G2/M transition DNA damage checkpoint","type":"exact"}],"termid":"GO:1902157"}


id: FYPO:0006897
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of actomyosin contractile ring contraction is increased. Contractile ring contraction is the part of cytokinesis in which the actomyosin contractile ring constricts.","definition_xrefs":["PomBase:mah","GO:1902404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal actomyosin contractile ring contraction","termid":"FYPO:0001364"},{"relation_name":"is_a","term_name":"increased rate of cytokinesis","termid":"FYPO:0004428"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000032"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001985","FYPO:0004803","FYPO:0005447","FYPO:0000631","FYPO:0000032"],"is_obsolete":false,"name":"increased rate of actomyosin contractile ring contraction","synonyms":[{"name":"increased rate of actomyosin contractile ring constriction","type":"exact"},{"name":"increased rate of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"increased rate of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"increased rate of contractile ring contraction","type":"exact"},{"name":"increased rate of cytokinetic contractile ring contraction","type":"exact"},{"name":"increased rate of mitotic actomyosin contractile ring contraction","type":"exact"},{"name":"increased rate of mitotic contractile ring contraction","type":"exact"}],"termid":"FYPO:0006897"}


id: PBO:0042552
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 15","termid":"PBO:0042552"}


id: PBO:0031057
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_cell_division,_normal_cell_morphology","termid":"PBO:0031057"}


id: PBO:0058670
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6798","termid":"PBO:0058670"}


id: PBO:0043598
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type XXVII alpha 1 chain","termid":"PBO:0043598"}


id: PR:Q9P6K1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vesicle transport protein SFT2C that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein transport protein sft2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1527.02","secondary_identifiers":["UniProtKB:Q9P6K1"],"synonyms":[{"name":"SPAC1527.02","type":"related"},{"name":"Spom972h-SFT2D3","type":"exact"}],"termid":"PR:Q9P6K1"}


id: PBO:0012286
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi membrane protein involved in vesicle-mediated transport (predicted)","termid":"PBO:0012286"}


id: MONDO:0016207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Intraocular inflammation occurring after extracapsular cataract extraction; probably an immune reaction to the patient's liberated lenticular proteins.","direct_ancestors":[{"relation_name":"is_a","term_name":"non-infectious anterior uveitis","termid":"MONDO:0017634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"phacoanaphylactic uveitis","secondary_identifiers":["Orphanet:209959","SCTID:410494003","UMLS:C1444621","MEDGEN:731803","GARD:20443"],"synonyms":[{"name":"Phacoallergic endophthalmitis","type":"exact"},{"name":"Phacoantigenic endophthalmitis","type":"exact"},{"name":"Phako-anaphylactic endophthalmitis","type":"exact"},{"name":"endophthalmitis phacoanaphylactica","type":"exact"},{"name":"lens-induced endophthalmitis","type":"exact"},{"name":"lens-induced iridocyclitis","type":"related"},{"name":"lens-induced uveitis","type":"exact"}],"termid":"MONDO:0016207","xrefs":{"Monarch":{"xref_id":"0016207"}}}


id: PBO:0077010
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombospondin 1","termid":"PBO:0077010"}


id: MONDO:0017549
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"humero-radio-ulnar synostosis","termid":"MONDO:0017983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"humero-radio-ulnar synostosis, bilateral","secondary_identifiers":["Orphanet:295207","MEDGEN:1744773","UMLS:C5438978","icd11.foundation:557249772"],"synonyms":[{"name":"humero-radio-ulnar fusion, bilateral","type":"exact"}],"termid":"MONDO:0017549","xrefs":{"Monarch":{"xref_id":"0017549"}}}


id: MONDO:0009957
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reese retinal dysplasia","secondary_identifiers":["OMIM:266400","MEDGEN:341456","MESH:C564854","UMLS:C1849450"],"synonyms":[{"name":"Reese retinal dysplasia","type":"exact"}],"termid":"MONDO:0009957","xrefs":{"Monarch":{"xref_id":"0009957"}}}


id: PBO:0076369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"trace amine associated receptor 6","termid":"PBO:0076369"}


id: GO:0070057
data:
  {"annotated_genes":["SJAG_03536","SJAG_04080","SJAG_00405"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[104935,107314,120613],"is_not":false,"summary":null,"term":"GO:0070057"}]},"cv_name":"cellular_component","definition":"The region of the prospore membrane to which the spindle pole body (SPB) is anchored; the prospore membrane extends from the SPB attachment site to surround the spore nucleus.","definition_xrefs":["PMID:14702385","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"prospore membrane","termid":"GO:0005628"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00405":null,"SJAG_03536":null,"SJAG_04080":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005628"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005628","GO:0005575"],"is_obsolete":false,"name":"prospore membrane spindle pole body attachment site","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"forespore membrane SPB attachment site","type":"exact"},{"name":"forespore membrane spindle pole body attachment site","type":"exact"},{"name":"prospore membrane SPB attachment site","type":"exact"}],"termid":"GO:0070057","terms_by_termid":{"GO:0070057":null}}


id: PBO:0048113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FUN14 domain containing 2 pseudogene 1","termid":"PBO:0048113"}


id: PBO:0061057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nischarin","termid":"PBO:0061057"}


id: MONDO:0005447
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm that affects the testis. Representative examples include seminoma, embryonal carcinoma, sarcoma, leukemia, and lymphoma.","definition_xrefs":["NCIT:C7251"],"direct_ancestors":[{"relation_name":"is_a","term_name":"male reproductive organ cancer","termid":"MONDO:0005836"},{"relation_name":"is_a","term_name":"neoplasm of testis","termid":"MONDO:0021348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"testicular cancer","secondary_identifiers":["MESH:D013736","DOID:2998","ICD9:186","SCTID:363449006","UMLS:C0153594","EFO:0005088","NCIT:C5053","MEDGEN:56313","ICD10CM:C62","ICD9:186.9"],"synonyms":[{"name":"cancer of testis","type":"exact"},{"name":"malignant neoplasm of testis","type":"exact"},{"name":"malignant neoplasm of the testis","type":"exact"},{"name":"malignant testicular neoplasm","type":"exact"},{"name":"malignant testicular tumor","type":"exact"},{"name":"malignant testicular tumour","type":"exact"},{"name":"malignant testis neoplasm","type":"exact"},{"name":"malignant tumor of testis","type":"exact"},{"name":"malignant tumor of the testis","type":"exact"},{"name":"malignant tumour of testis","type":"exact"},{"name":"malignant tumour of the testis","type":"exact"},{"name":"paediatric testicular neoplasm","type":"related"},{"name":"testicular tumor","type":"broad"},{"name":"testicular tumour","type":"broad"},{"name":"testis cancer","type":"exact"},{"name":"testis neoplasm","type":"broad"}],"termid":"MONDO:0005447","xrefs":{"Monarch":{"xref_id":"0005447"}}}


id: GO:1990682
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of a macrophage colony-stimulating factor (CSF1, also called M-CSF) dimer bound to a dimerized receptor (CSF1R, also called FMS). Receptor dimerization requires the presence of the ligand.","definition_xrefs":["PMID:19017797","GOC:nc","GOC:bf","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"CSF1-CSF1R complex","synonyms":[{"name":"CSF1:C-FMS complex","type":"exact"},{"name":"M-CSF:C-FMS complex","type":"related"},{"name":"M-CSF:CSF1R complex","type":"related"},{"name":"M-CSF:FMS complex","type":"exact"},{"name":"macrophage colony-stimulating factor:receptor complex","type":"exact"}],"termid":"GO:1990682"}


id: PBO:0065496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PSMG3 pseudogene 1","termid":"PBO:0065496"}


id: GO:0019174
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetrahydrothiophene 1-oxide + reduced acceptor = tetrahydrothiophene + acceptor.","definition_xrefs":["MetaCyc:THTOREDUCT-RXN"],"gene_count":0,"genotype_count":0,"name":"obsolete tetrahydrothiophene 1-oxide reductase activity (obsolete GO:0019174)","termid":"GO:0019174"}


id: PBO:0003395
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein Nop56 (predicted)","termid":"PBO:0003395"}


id: PBO:0090420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome b5 Cyb502","termid":"PBO:0090420"}


id: MONDO:0000692
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Kleine-Levin syndrome (obsolete MONDO:0000692)","termid":"MONDO:0000692","xrefs":{"Monarch":{"xref_id":"0000692"}}}


id: GO:0046358
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of butyrate, the anion of butyric acid.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"butyrate metabolic process","termid":"GO:0019605"},{"relation_name":"is_a","term_name":"short-chain fatty acid biosynthetic process","termid":"GO:0051790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"butyrate biosynthetic process","secondary_identifiers":["GO:0043439"],"synonyms":[{"name":"butanoic acid anabolism","type":"exact"},{"name":"butanoic acid biosynthesis","type":"exact"},{"name":"butanoic acid biosynthetic process","type":"exact"},{"name":"butanoic acid formation","type":"exact"},{"name":"butanoic acid synthesis","type":"exact"},{"name":"butyrate anabolism","type":"exact"},{"name":"butyrate biosynthesis","type":"exact"},{"name":"butyrate formation","type":"exact"},{"name":"butyrate synthesis","type":"exact"}],"termid":"GO:0046358"}


id: PBO:0089023
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA-binding protein, G-patch type, human GPATCH11 ortholog","termid":"PBO:0089023"}


id: MONDO:0017245
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary sequestration","termid":"MONDO:0017843"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intralobar congenital pulmonary sequestration","secondary_identifiers":["MEDGEN:1842539","Orphanet:280802","GARD:21090","UMLS:C5679950"],"synonyms":[{"name":"congenital intrapulmonary sequestration","type":"exact"},{"name":"intralobar congenital bronchopulmonary sequestration","type":"exact"}],"termid":"MONDO:0017245","xrefs":{"Monarch":{"xref_id":"0017245"}}}


id: GO:0062061
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a TAP complex.","definition_xrefs":["PMID:17947644"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"TAP complex binding","termid":"GO:0062061"}


id: PBO:0049335
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"general transcription factor IIH subunit 2B (pseudogene)","termid":"PBO:0049335"}


id: MONDO:0010040
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ataxia, spastic, childhood-onset, autosomal recessive, with optic atrophy and intellectual disability","secondary_identifiers":["OMIM:270500","UMLS:C3151619","MEDGEN:462969"],"synonyms":[{"name":"ataxia, spastic, childhood-onset, autosomal recessive, with optic atrophy and intellectual disability","type":"exact"},{"name":"ataxia, spastic, childhood-onset, autosomal recessive, with optic atrophy and mental retardation","type":"exact"}],"termid":"MONDO:0010040","xrefs":{"Monarch":{"xref_id":"0010040"}}}


id: PBO:0085453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Possible shared subunit of Cop9 signalosome (CSN) and eIF3; binds eIF3b subunit Prt1p, has possible dual functions in transcriptional and translational control, contains a PCI (Proteasome-COP9 signalosome (CSN)-eIF3) domain","termid":"PBO:0085453"}


id: PBO:0088733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic double-strand break formation protrin Mde2","termid":"PBO:0088733"}


id: PBO:0038298
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase feature property types","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial_sequence","termid":"PBO:0038298"}


id: GO:0005918
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell-cell junction that forms a continuous band around each cell in an epithelium; within the septate junction the membranes of adjacent cells maintain a constant distance of approximately 15 nm; found in arthropods.","definition_xrefs":["ISBN:0815332181","PMID:28636800","PMID:11700298","PMID:12612641","PMID:20795303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tight junction","termid":"GO:0070160"},{"relation_name":"part_of","term_name":"apical junction complex","termid":"GO:0043296"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"septate junction","secondary_identifiers":["NIF_Subcellular:sao427941916"],"synonyms":[{"name":"septate desmosome","type":"related"}],"termid":"GO:0005918"}


id: GO:0003384
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The actin-mediated process that results in the contraction of the apical end of a polarized columnar epithelial cell, contributing to the process of gastrulation.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"apical constriction","termid":"GO:0003383"},{"relation_name":"part_of","term_name":"epithelial cell morphogenesis involved in gastrulation","termid":"GO:0003381"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"apical constriction involved in gastrulation","termid":"GO:0003384"}


id: MONDO:0014282
data:
  {"annotated_genes":["SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87605],"is_not":false,"summary":null,"term":"MONDO:0014282"}]},"cv_name":"mondo","definition":"Any pure hereditary spastic paraplegia in which the cause of the disease is a mutation in the REEP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 72","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17660","DOID:0110817","Orphanet:401849","OMIM:615625","UMLS:C5882669","MEDGEN:1847422"],"synonyms":[{"name":"REEP2 pure hereditary spastic paraplegia","type":"exact"},{"name":"SPG72","type":"exact"},{"name":"autosomal spastic paraplegia type 72","type":"exact"},{"name":"hereditary spastic paraplegia type 72","type":"exact"},{"name":"pure hereditary spastic paraplegia caused by mutation in REEP2","type":"exact"},{"name":"spastic paraplegia 72, autosomal dominant","type":"narrow"},{"name":"spastic paraplegia 72, autosomal recessive","type":"narrow"}],"termid":"MONDO:0014282","terms_by_termid":{"MONDO:0014282":null},"xrefs":{"Monarch":{"xref_id":"0014282"}}}


id: PBO:0066747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 45","termid":"PBO:0066747"}


id: GO:1905577
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to ganglioside GP1c.","definition_xrefs":["PMID:1454804","GO_REF:0000067","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid binding","termid":"GO:0031406"},{"relation_name":"is_a","term_name":"ganglioside binding","termid":"GO:0035594"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0008289"],"is_obsolete":false,"name":"ganglioside GP1c binding","termid":"GO:1905577"}


id: PBO:0063860
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piercer of microtubule wall 2","termid":"PBO:0063860"}


id: PBO:0054176
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1549","termid":"PBO:0054176"}


id: PBO:0088476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTREC (exosome adaptor) complex zf-CCCH type zinc finger subunit Red5","termid":"PBO:0088476"}


id: PBO:0031093
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vacuoles_present_in_increased_numbers_during_vegetative_growth","termid":"PBO:0031093"}


id: MONDO:0024316
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A dysfunction in biological function that is due to a psychological process.","definition_xrefs":["NCIT:C35186"],"direct_ancestors":[{"relation_name":"is_a","term_name":"somatoform disorder","termid":"MONDO:0003117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"physiological malfunction arising from mental factor","secondary_identifiers":["MEDGEN:102310","UMLS:C0154548"],"synonyms":[{"name":"physiological malfunction arising from mental Factor","type":"exact"}],"termid":"MONDO:0024316","xrefs":{"Monarch":{"xref_id":"0024316"}}}


id: MONDO:1010991
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hydrocephalus that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocephalus, non-human animal","termid":"MONDO:1010233"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, cattle","secondary_identifiers":["OMIA:000487-9913"],"termid":"MONDO:1010991","xrefs":{"Monarch":{"xref_id":"1010991"}}}


id: PBO:0059907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND1 pseudogene 30","termid":"PBO:0059907"}


id: PBO:0060952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear factor I X","termid":"PBO:0060952"}


id: MONDO:1011205
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Van den Ende-Gupta syndrome that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Van den Ende-Gupta syndrome, non-human animal","termid":"MONDO:1010314"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Van den Ende-Gupta syndrome, dog","secondary_identifiers":["OMIA:002016-9615"],"termid":"MONDO:1011205","xrefs":{"Monarch":{"xref_id":"1011205"}}}


id: GO:0021967
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the migration of an axon growth cone of a pyramidal cell that is part of the corticospinal tract is directed from its cell body in layer V through the cerebral cortex in response to a combination of attractive and repulsive cues.","definition_xrefs":["PMID:9878731","GOC:cls","GO_REF:0000021","GOC:dgh","GOC:jid","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axon guidance","termid":"GO:0007411"},{"relation_name":"part_of","term_name":"corticospinal neuron axon guidance","termid":"GO:0021966"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"corticospinal neuron axon guidance through the cerebral cortex","synonyms":[{"name":"corticospinal neuron axon pathfinding through the cerebral cortex","type":"narrow"}],"termid":"GO:0021967"}


id: MONDO:0011018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An exceedingly rare form of brachyolmia, characterized by mild platyspondyly, broad ilia, elongated femoral necks with coxa valga, scoliosis, and short trunked short stature associated with amelogenesis imperfecta of both primary and permanent dentition.","definition_xrefs":["Orphanet:2899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"brachyolmia-amelogenesis imperfecta syndrome","secondary_identifiers":["DOID:0090143","MEDGEN:318659","GARD:5478","UMLS:C1832594","SCTID:716195006","OMIM:601216"],"synonyms":[{"name":"DASS","type":"exact"},{"name":"STHAG6","type":"exact"},{"name":"Verloes Bourguignon syndrome","type":"related"},{"name":"Verloes-Bourguignon syndrome","type":"exact"},{"name":"amelogenesis imperfecta and platyspondyly","type":"related"},{"name":"dental anomalies and short stature","type":"exact"},{"name":"platyspondyly with amelogenesis imperfecta","type":"exact"},{"name":"platyspondyly-amelogenesis imperfecta syndrome","type":"exact"},{"name":"selective tooth agenesis 5","type":"exact"},{"name":"skeletal dysplasia with amelogenesis imperfecta and platyspondyly","type":"related"},{"name":"tooth agenesis, selective, 6","type":"exact"},{"name":"tooth agenesis, selective, 6, formerly","type":"related"}],"termid":"MONDO:0011018","xrefs":{"Monarch":{"xref_id":"0011018"}}}


id: GO:1902333
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any DNA ligation that is involved in nuclear cell cycle DNA replication.","definition_xrefs":["GOC:mtg_cell_cycle","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete nuclear DNA replication DNA ligation (obsolete GO:1902333)","synonyms":[{"name":"DNA ligation involved in DNA replication during S phase","type":"related"},{"name":"DNA ligation involved in DNA replication involved in S phase","type":"exact"},{"name":"DNA ligation involved in DNA replication involved in S-phase","type":"exact"},{"name":"DNA ligation involved in nuclear cell cycle DNA replication","type":"exact"}],"termid":"GO:1902333"}


id: MONDO:0000665
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Apraxia is a neurological disorder characterized by the inability to perform tasks or movements, despite having the desire and physical ability to perform them. It is caused by damage to the brain, especially the parietal lobe, and can arise from many diseases, tumors, a stroke, or traumatic brain injury. In some cases it is present from birth. There are several types of apraxia, which may occur alone or together. These include: Buccofacial or orofacial apraxia is the inability to carry out facial movements on demand. This may include licking the lips, sticking out the tongue, whistling, coughing, or winking. Ideational apraxia is the inability to carryout learned, complex tasks with multiple, sequential movements. This may include dressing, eating, and bathing. Ideomotor apraxia is the inability to perform a learned task (such as using a tool) or communicate using gestures (like waving good-bye). Limb-kinetic apraxia is the inability to make fine, precise movements with an arm or leg. This may include buttoning a shirt or tying a shoe. Verbal apraxia is difficulty coordinating mouth and speech movements. Verbal apraxia may be acquired or present from birth. Constructional apraxia is the inability to copy, draw, or construct simple figures. Oculomotor apraxia is difficulty moving the eyes on command. Treatment of apraxia may include physical, speech, or occupational therapy. If apraxia occurs as a symptom of another disorder, treatment should be directed to the underlying condition.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"agnosia","termid":"MONDO:0005638"},{"relation_name":"is_a","term_name":"perceptual disorders","termid":"MONDO:0024417"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"apraxia","secondary_identifiers":["icd11.foundation:986651951","DOID:0060135","UMLS:C0003635","MEDGEN:8166","NCIT:C180557","ICD10CM:R48.2","MESH:D001072"],"synonyms":[{"name":"Apraxias","type":"exact"},{"name":"dyspraxia","type":"exact"}],"termid":"MONDO:0000665","xrefs":{"Monarch":{"xref_id":"0000665"}}}


id: PBO:0041386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C5orf34 antisense RNA 1","termid":"PBO:0041386"}


id: SO:0001907
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that causes the extension of a genomic feature, with regard to the reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"feature_variant","termid":"SO:0001878"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"feature_elongation","secondary_identifiers":["http:www.ensembl.org/info/genome/variation/predicted_data.html#consequences"],"synonyms":[{"name":"VEP:feature_elongation","type":"exact"},{"name":"feature elongation","type":"exact"}],"termid":"SO:0001907"}


id: PATO:0001374
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality inhering in a bearer by virtue of the bearer's number of homologous sets of chromosomes in the nucleus or primary chromosome-containing compartment of the cell, each set essentially coding for all the biological traits of the organism.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Ploidy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ploidy","termid":"PATO:0001374"}


id: GO:0060696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of phospholipid catabolism, the chemical reactions and pathways resulting in the breakdown of phospholipids, any lipid containing phosphoric acid as a mono- or diester.","definition_xrefs":["GOC:BHF","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lipid catabolic process","termid":"GO:0050994"},{"relation_name":"is_a","term_name":"regulation of phospholipid metabolic process","termid":"GO:1903725"},{"relation_name":"regulates","term_name":"phospholipid catabolic process","termid":"GO:0009395"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"regulation of phospholipid catabolic process","termid":"GO:0060696"}


id: PBO:0078716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Leu (anticodon TAA) 1-1","termid":"PBO:0078716"}


id: FYPO:0007538
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to paromomycin. Cells stop growing (and may die) at a concentration of paromomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985","FYPO:0000139"],"is_obsolete":false,"name":"sensitive to paromomycin","synonyms":[{"name":"hypersensitive to paromomycin","type":"exact"},{"name":"sensitive to paromomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to paromomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0007538"}


id: PBO:0048549
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G elongation factor mitochondrial 1","termid":"PBO:0048549"}


id: MONDO:0021260
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the sensory ganglion.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensory ganglionopathy","synonyms":[{"name":"disease of sensory ganglion","type":"exact"},{"name":"disease or disorder of sensory ganglion","type":"exact"},{"name":"disorder of sensory ganglion","type":"exact"},{"name":"sensory ganglion disease","type":"exact"},{"name":"sensory ganglion disease or disorder","type":"exact"}],"termid":"MONDO:0021260","xrefs":{"Monarch":{"xref_id":"0021260"}}}


id: GO:1901465
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of tetrapyrrole biosynthetic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"positive regulation of tetrapyrrole metabolic process","termid":"GO:1901403"},{"relation_name":"is_a","term_name":"regulation of tetrapyrrole biosynthetic process","termid":"GO:1901463"},{"relation_name":"positively_regulates","term_name":"tetrapyrrole biosynthetic process","termid":"GO:0033014"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0033013"},{"rel_name":"positively_regulates","termid":"GO:0033013"}],"interesting_parent_ids":["GO:0033013","GO:0008150"],"is_obsolete":false,"name":"positive regulation of tetrapyrrole biosynthetic process","synonyms":[{"name":"activation of tetrapyrrole anabolism","type":"exact"},{"name":"activation of tetrapyrrole biosynthesis","type":"exact"},{"name":"activation of tetrapyrrole biosynthetic process","type":"narrow"},{"name":"activation of tetrapyrrole formation","type":"exact"},{"name":"activation of tetrapyrrole synthesis","type":"exact"},{"name":"positive regulation of tetrapyrrole anabolism","type":"exact"},{"name":"positive regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"positive regulation of tetrapyrrole formation","type":"exact"},{"name":"positive regulation of tetrapyrrole synthesis","type":"exact"},{"name":"up regulation of tetrapyrrole anabolism","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"up regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"up regulation of tetrapyrrole formation","type":"exact"},{"name":"up regulation of tetrapyrrole synthesis","type":"exact"},{"name":"up-regulation of tetrapyrrole anabolism","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"up-regulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"up-regulation of tetrapyrrole formation","type":"exact"},{"name":"up-regulation of tetrapyrrole synthesis","type":"exact"},{"name":"upregulation of tetrapyrrole anabolism","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthesis","type":"exact"},{"name":"upregulation of tetrapyrrole biosynthetic process","type":"exact"},{"name":"upregulation of tetrapyrrole formation","type":"exact"},{"name":"upregulation of tetrapyrrole synthesis","type":"exact"}],"termid":"GO:1901465"}


id: PBO:0012035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER protein involved in ER-nucleus signaling (predicted)","termid":"PBO:0012035"}


id: GO:0046754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The exit of a fully formed virion particles from the host cell by exocytosis via a host vesicle.","definition_xrefs":["ISBN:0072370319","PMID:33157038"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-lytic viral release","termid":"GO:0046753"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral exocytosis","synonyms":[{"name":"viral egress by exocytosis","type":"exact"}],"termid":"GO:0046754"}


id: GO:0072115
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the head kidney are generated and organized. The head kidney is a pronephros that consists of fused bilateral lobes located in the anterior part of the kidney.","definition_xrefs":["ZFA:0000669","GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pronephros morphogenesis","termid":"GO:0072114"},{"relation_name":"part_of","term_name":"head kidney development","termid":"GO:0072113"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"head kidney morphogenesis","termid":"GO:0072115"}


id: PBO:0087911
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state","termid":"PBO:0087911"}


id: PBO:0017873
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transporter for GlyceroPhosphodiester","termid":"PBO:0017873"}


id: PBO:0114078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase superfamily protein, septin related","termid":"PBO:0114078"}


id: MOD:00915
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that modifies an L-proline residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by amino acid modified","termid":"MOD:01157"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified L-proline residue","synonyms":[{"name":"ModPro","type":"exact"}],"termid":"MOD:00915"}


id: PBO:0062573
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 10 subfamily D member 1 pseudogene","termid":"PBO:0062573"}


id: GO:0006398
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any mRNA 3'-end processing that involves the binding to and cleavage of a stem-loop structure. For example, histone mRNAs contain a highly conserved stem-loop sequence at the 3' end of the mRNA with a 6 base pairs (bp) stem and a 4-nt loop. The mRNA is cleaved between these two elements, after the fourth or fifth nucleotide, which is typically an adenosine.","definition_xrefs":["GOC:tb","GOC:mah","PMID:17998288"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone mRNA metabolic process","termid":"GO:0008334"},{"relation_name":"is_a","term_name":"mRNA 3'-end processing","termid":"GO:0031124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0016071"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"mRNA 3'-end processing by stem-loop binding and cleavage","secondary_identifiers":["Reactome:R-HSA-77588"],"synonyms":[{"name":"histone mRNA 3' end processing","type":"narrow"}],"termid":"GO:0006398"}


id: GO:0047348
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: sn-glycerol 3-phosphate + CTP = CDP-glycerol + diphosphate.","definition_xrefs":["RHEA:13361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytidylyltransferase activity","termid":"GO:0070567"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016779"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824","GO:0016779"],"is_obsolete":false,"name":"glycerol-3-phosphate cytidylyltransferase activity","secondary_identifiers":["MetaCyc:2.7.7.39-RXN","EC:2.7.7.39","KEGG_REACTION:R00856"],"synonyms":[{"name":"CDP-glycerol diphosphorylase activity","type":"related"},{"name":"CDP-glycerol pyrophosphorylase activity","type":"related"},{"name":"CTP:glycerol 3-phosphate cytidylyltransferase activity","type":"related"},{"name":"CTP:glycerol-3-phosphate cytidylyltransferase activity","type":"exact"},{"name":"CTP:sn-glycerol-3-phosphate cytidylyltransferase activity","type":"related"},{"name":"Gro-PCT","type":"related"},{"name":"cytidine diphosphate glycerol pyrophosphorylase activity","type":"related"},{"name":"cytidine diphosphoglycerol pyrophosphorylase activity","type":"related"}],"termid":"GO:0047348"}


id: GO:1902159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cyclic nucleotide-gated ion channel activity.","definition_xrefs":["PMID:11420311","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transporter activity","termid":"GO:0032412"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"regulation of cyclic nucleotide-gated ion channel activity","synonyms":[{"name":"regulation of cyclic nucleotide activated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide gated ion channel activity","type":"exact"},{"name":"regulation of cyclic nucleotide-activated ion channel activity","type":"exact"}],"termid":"GO:1902159"}


id: GO:0002784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antimicrobial peptide production.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of production of molecular mediator of immune response","termid":"GO:0002700"},{"relation_name":"is_a","term_name":"regulation of antimicrobial humoral response","termid":"GO:0002759"},{"relation_name":"regulates","term_name":"antimicrobial peptide production","termid":"GO:0002775"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of antimicrobial peptide production","termid":"GO:0002784"}


id: PBO:0051624
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ILK associated serine/threonine phosphatase","termid":"PBO:0051624"}


id: PBO:0043721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6C","termid":"PBO:0043721"}


id: PBO:0028222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_splicing","termid":"PBO:0028222"}


id: PBO:0040079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"arylsulfatase A","termid":"PBO:0040079"}


id: GO:0048630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The increase in size or mass of a skeletal muscle. This may be due to a change in the fiber number or size.","definition_xrefs":["PMID:15907921","GOC:lm","PMID:15726494"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth","termid":"GO:0048589"},{"relation_name":"part_of","term_name":"skeletal muscle tissue development","termid":"GO:0007519"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"skeletal muscle tissue growth","termid":"GO:0048630"}


id: FYPO:0006055
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type) during the second meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle pole body","termid":"FYPO:0003541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body during meiosis II","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic SPB during meiosis II","type":"exact"},{"name":"normal protein localization to meiotic spindle pole body during second meiotic nuclear division","type":"exact"}],"termid":"FYPO:0006055"}


id: PBO:0074371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMCR8-C9orf72 complex subunit","termid":"PBO:0074371"}


id: GO:1904775
data:
  {"annotated_genes":["SJAG_01672"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91200],"is_not":false,"summary":null,"term":"GO:1904775"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquinone biosynthetic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:8125303"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biosynthetic process","termid":"GO:0009891"},{"relation_name":"is_a","term_name":"regulation of ubiquinone biosynthetic process","termid":"GO:0010795"},{"relation_name":"is_a","term_name":"positive regulation of small molecule metabolic process","termid":"GO:0062013"},{"relation_name":"positively_regulates","term_name":"ubiquinone biosynthetic process","termid":"GO:0006744"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01672":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006744"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"positively_regulates","termid":"GO:0006744"}],"interesting_parent_ids":["GO:0044281","GO:0006744","GO:0008150"],"is_obsolete":false,"name":"positive regulation of ubiquinone biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of coenzyme Q biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"activation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"activation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"activation of ubiquinone anabolism","type":"narrow"},{"name":"activation of ubiquinone biosynthesis","type":"narrow"},{"name":"activation of ubiquinone biosynthetic process","type":"narrow"},{"name":"activation of ubiquinone formation","type":"narrow"},{"name":"activation of ubiquinone synthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"positive regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"positive regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"positive regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"positive regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"positive regulation of ubiquinone anabolism","type":"exact"},{"name":"positive regulation of ubiquinone biosynthesis","type":"exact"},{"name":"positive regulation of ubiquinone formation","type":"exact"},{"name":"positive regulation of ubiquinone synthesis","type":"exact"},{"name":"up regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"up regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"up regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"up regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"up regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"up regulation of ubiquinone anabolism","type":"exact"},{"name":"up regulation of ubiquinone biosynthesis","type":"exact"},{"name":"up regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"up regulation of ubiquinone formation","type":"exact"},{"name":"up regulation of ubiquinone synthesis","type":"exact"},{"name":"up-regulation of coenzyme Q biosynthesis","type":"exact"},{"name":"up-regulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"up-regulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"up-regulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"up-regulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"up-regulation of ubiquinone anabolism","type":"exact"},{"name":"up-regulation of ubiquinone biosynthesis","type":"exact"},{"name":"up-regulation of ubiquinone biosynthetic process","type":"exact"},{"name":"up-regulation of ubiquinone formation","type":"exact"},{"name":"up-regulation of ubiquinone synthesis","type":"exact"},{"name":"upregulation of coenzyme Q biosynthesis","type":"exact"},{"name":"upregulation of coenzyme Q biosynthetic process","type":"exact"},{"name":"upregulation of coenzyme Q10 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q10 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q6 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q6 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q8 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q8 biosynthetic process","type":"narrow"},{"name":"upregulation of coenzyme Q9 biosynthesis","type":"narrow"},{"name":"upregulation of coenzyme Q9 biosynthetic process","type":"narrow"},{"name":"upregulation of ubiquinone anabolism","type":"exact"},{"name":"upregulation of ubiquinone biosynthesis","type":"exact"},{"name":"upregulation of ubiquinone biosynthetic process","type":"exact"},{"name":"upregulation of ubiquinone formation","type":"exact"},{"name":"upregulation of ubiquinone synthesis","type":"exact"}],"termid":"GO:1904775","terms_by_termid":{"GO:1904775":null}}


id: GO:1903751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intrinsic apoptotic signaling pathway in response to hydrogen peroxide.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:18681888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of hydrogen peroxide-mediated programmed cell death","termid":"GO:1901299"},{"relation_name":"is_a","term_name":"negative regulation of oxidative stress-induced intrinsic apoptotic signaling pathway","termid":"GO:1902176"},{"relation_name":"is_a","term_name":"regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:1903750"},{"relation_name":"negatively_regulates","term_name":"intrinsic apoptotic signaling pathway in response to hydrogen peroxide","termid":"GO:0036481"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","synonyms":[{"name":"down regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"down regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"down-regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"down-regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"down-regulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"downregulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"downregulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"},{"name":"downregulation of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"exact"},{"name":"inhibition of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"inhibition of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to H2O2","type":"narrow"},{"name":"inhibition of intrinsic apoptotic signaling pathway in response to hydrogen peroxide","type":"narrow"},{"name":"negative regulation of H2O2-induced intrinsic apoptotic signaling pathway","type":"related"},{"name":"negative regulation of hydrogen peroxide-induced intrinsic apoptotic signaling pathway","type":"exact"},{"name":"negative regulation of intrinsic apoptotic signaling pathway in response to H2O2","type":"exact"}],"termid":"GO:1903751"}


id: PBO:0053453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 402","termid":"PBO:0053453"}


id: PBO:0062752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily L member 1","termid":"PBO:0062752"}


id: GO:0031747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 2 cysteinyl leukotriene receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl leukotriene receptor binding","termid":"GO:0031745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 2 cysteinyl leukotriene receptor binding","synonyms":[{"name":"type 2 cysteinyl leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031747"}


id: PBO:0078553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 43","termid":"PBO:0078553"}


id: PBO:0050125
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 35","termid":"PBO:0050125"}


id: PBO:0080375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting 4 homolog B","termid":"PBO:0080375"}


id: MOD:00645
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue sulfanyl group with an acetylsulfanyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylated residue","termid":"MOD:00394"},{"relation_name":"is_a","term_name":"S-acylated residue","termid":"MOD:00672"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-acetylated residue","synonyms":[{"name":"SAcRes","type":"exact"}],"termid":"MOD:00645"}


id: PBO:0120329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1D9 antisense RNA 1","termid":"PBO:0120329"}


id: PR:O74359
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC28E12.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74359"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 60 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28E12.02","synonyms":[{"name":"Spom972h-SPBC28E12.02","type":"exact"}],"termid":"PR:O74359"}


id: MONDO:0020537
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Occupational allergic alveolitis designates a hypersensitivity pneumonitis resulting from the inhalation of an antigen to which an individual has been previously sensitized in his/her occupational environment. Symptoms vary depending on the antigen and the form (acute, subacute, chronic) of the disease. They may be cough, dyspnea, chills, fever, weight loss, loss of appetite and general malaise","definition_xrefs":["Orphanet:99909"],"gene_count":0,"genotype_count":0,"name":"obsolete occupational allergic alveolitis (obsolete MONDO:0020537)","termid":"MONDO:0020537","xrefs":{"Monarch":{"xref_id":"0020537"}}}


id: MONDO:1010596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hyperthyroidism that occurs in horse.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperthyroidism, non-human animal","termid":"MONDO:1010055"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hyperthyroidism, horse","secondary_identifiers":["OMIA:000511-9796"],"termid":"MONDO:1010596","xrefs":{"Monarch":{"xref_id":"1010596"}}}


id: GO:0098898
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the dense core granule membrane.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule lumen","termid":"GO:0034774"},{"relation_name":"part_of","term_name":"dense core granule","termid":"GO:0031045"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0031410"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0031410"],"is_obsolete":false,"name":"dense core granule lumen","synonyms":[{"name":"dense core vesicle lumen","type":"exact"}],"termid":"GO:0098898"}


id: MONDO:0800317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited primary ovarian failure","termid":"MONDO:0019852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"premature ovarian failure 4","secondary_identifiers":["MEDGEN:336904","UMLS:C1845295"],"synonyms":[{"name":"POF4","type":"exact"}],"termid":"MONDO:0800317","xrefs":{"Monarch":{"xref_id":"0800317"}}}


id: MONDO:0007700
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hawkinsinuria is an inborn error of tyrosine metabolism characterized by failure to thrive, persistent metabolic acidosis, fine and sparse hair, and excretion of the unusual cyclic amino acid metabolite, hawkinsin ((2-l-cystein-S-yl, 4-dihydroxycyclohex-5-en-1-yl)acetic acid), in the urine.","definition_xrefs":["Orphanet:2118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of tyrosine metabolism","termid":"MONDO:0017307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004736"],"is_obsolete":false,"name":"hawkinsinuria","secondary_identifiers":["MEDGEN:419319","MESH:C535845","OMIM:140350","UMLS:C2931042","GARD:5668","DOID:0111362","icd11.foundation:786595759","SCTID:414380008"],"synonyms":[{"name":"4-HPPD deficiency","type":"exact"},{"name":"4-alpha-hydroxyphenylpyruvate hydroxylase deficiency","type":"exact"},{"name":"4-hydroxyphenylpyruvic acid dioxygenase deficiency","type":"exact"},{"name":"hawkinsinuria","type":"exact"}],"termid":"MONDO:0007700","xrefs":{"Monarch":{"xref_id":"0007700"}}}


id: GO:1903819
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any detection of stimulus that is involved in a mitotic cytokinesis checkpoint.","definition_xrefs":["GOC:mtg_cell_cycle","GO_REF:0000060","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete detection of stimulus involved in mitotic cytokinesis checkpoint (obsolete GO:1903819)","synonyms":[{"name":"perception of stimulus involved in mitotic cytokinesis checkpoint","type":"related"},{"name":"stimulus detection involved in mitotic cytokinesis checkpoint","type":"exact"},{"name":"stimulus sensing involved in mitotic cytokinesis checkpoint","type":"related"}],"termid":"GO:1903819"}


id: GO:0004117
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reactions: 3',5'-cyclic AMP + H2O = AMP + H+ and 3',5'-cyclic GMP + H2O = GMP + H+; this activity is activated by binding to calcium-bound calmodulin.","definition_xrefs":["PMID:9419816","PMID:8557689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3',5'-cyclic-AMP phosphodiesterase activity","termid":"GO:0004115"},{"relation_name":"is_a","term_name":"3',5'-cyclic-GMP phosphodiesterase activity","termid":"GO:0047555"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674","GO:0016788"],"is_obsolete":false,"name":"calmodulin-activated dual specificity 3',5'-cyclic-GMP, 3',5'-cyclic-AMP phosphodiesterase activity","secondary_identifiers":["Reactome:R-HSA-111955"],"synonyms":[{"name":"calmodulin-activated cyclic-nucleotide dual specificity phosphodiesterase activity","type":"related"},{"name":"calmodulin-dependent cyclic-nucleotide phosphodiesterase activity","type":"broad"}],"termid":"GO:0004117"}


id: MONDO:0021385
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or malignant neoplasm that affects the extrahepatic bile ducts. Representative examples include adenoma and adenocarcinoma.","definition_xrefs":["NCIT:C4441"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct neoplasm","termid":"MONDO:0021662"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"extrahepatic bile duct neoplasm","secondary_identifiers":["UMLS:C0345913","MEDGEN:91056","SCTID:126855001"],"synonyms":[{"name":"extrahepatic bile duct neoplasm","type":"exact"},{"name":"extrahepatic bile duct neoplasm (disease)","type":"exact"},{"name":"extrahepatic bile duct tumor","type":"exact"},{"name":"extrahepatic bile duct tumour","type":"exact"},{"name":"neoplasm of extrahepatic bile duct","type":"exact"},{"name":"neoplasm of the extrahepatic bile duct","type":"exact"},{"name":"tumor of extrahepatic bile duct","type":"exact"},{"name":"tumor of the extrahepatic bile duct","type":"exact"},{"name":"tumour of extrahepatic bile duct","type":"exact"},{"name":"tumour of the extrahepatic bile duct","type":"exact"}],"termid":"MONDO:0021385","xrefs":{"Monarch":{"xref_id":"0021385"}}}


id: PBO:0075633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 2C (pseudogene)","termid":"PBO:0075633"}


id: MONDO:1011096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Alkaptonuria that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaptonuria, non-human animal","termid":"MONDO:1010270"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkaptonuria, crab-eating macaque","secondary_identifiers":["OMIA:001243-9541"],"termid":"MONDO:1011096","xrefs":{"Monarch":{"xref_id":"1011096"}}}


id: PBO:0114948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FMN-dependent alpha-hydroxy acid dehydrogenase, probable lactate dehydrogenase","termid":"PBO:0114948"}


id: PBO:0001067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk9 (predicted)","termid":"PBO:0001067"}


id: MONDO:0006013
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Demyelinating leukoencephalomyelitis of sheep caused by the visna-maedi virus. It is similar to but not the same as scrapie.","definition_xrefs":["MESH:D016182"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sheep disease","termid":"MONDO:0024985"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"visna disease","synonyms":[{"name":"Visna/maedi virus caused disease or disorder","type":"exact"},{"name":"Visna/maedi virus disease or disorder","type":"exact"},{"name":"Visna/maedi virus infectious disease","type":"exact"}],"termid":"MONDO:0006013","xrefs":{"Monarch":{"xref_id":"0006013"}}}


id: PBO:0078852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transient receptor potential cation channel subfamily C member 6","termid":"PBO:0078852"}


id: PBO:0044035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSPG4 pseudogene 4 Y-linked","termid":"PBO:0044035"}


id: PBO:0051486
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGSF3 pseudogene 1","termid":"PBO:0051486"}


id: PBO:0043117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CIAO2A pseudogene 2","termid":"PBO:0043117"}


id: PBO:0060716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A6","termid":"PBO:0060716"}


id: GO:0006058
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the breakdown of a mannoprotein, a protein that contains covalently bound mannose residues.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete mannoprotein catabolic process (obsolete GO:0006058)","synonyms":[{"name":"mannoprotein breakdown","type":"exact"},{"name":"mannoprotein catabolism","type":"exact"},{"name":"mannoprotein degradation","type":"exact"}],"termid":"GO:0006058"}


id: PBO:0004051
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAR adaptor protein Hob1","termid":"PBO:0004051"}


id: PBO:0041510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 14 open reading frame 132","termid":"PBO:0041510"}


id: MONDO:0030729
data:
  {"annotated_genes":["SJAG_00336","SJAG_03542","SJAG_00303"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89127,89128,89129],"is_not":false,"summary":null,"term":"MONDO:0030729"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Tessadori-Van-Haaften neurodevelopmental syndrome","termid":"MONDO:0031400"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00303":null,"SJAG_00336":null,"SJAG_03542":null},"genotype_count":0,"is_obsolete":false,"name":"Tessadori-van Haaften neurodevelopmental syndrome 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1810348","OMIM:619758","UMLS:C5676922"],"synonyms":[{"name":"TEVANED1","type":"exact"},{"name":"Tessadori-van Haaften neurodevelopmental syndrome 1","type":"exact"}],"termid":"MONDO:0030729","terms_by_termid":{"MONDO:0030729":null},"xrefs":{"Monarch":{"xref_id":"0030729"}}}


id: FYPO:0004383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the mitotic spindle begins earlier than normal.","definition_xrefs":["PomBase:mah","PMID:20935472"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to mitotic spindle","termid":"FYPO:0002824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138"],"is_obsolete":false,"name":"premature protein localization to mitotic spindle","synonyms":[{"name":"advanced protein localization to mitotic spindle","type":"exact"},{"name":"precocious protein localization to mitotic spindle","type":"related"},{"name":"premature protein localisation to mitotic spindle","type":"exact"},{"name":"premature protein localization to mitotic spindle during mitotic cell cycle","type":"related"},{"name":"premature protein localization to spindle during mitosis","type":"exact"},{"name":"premature protein localization to spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0004383"}


id: MONDO:0013017
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypotrichosis that has material basis in a mutation on chromosome 1p21.1-q21.3.","definition_xrefs":["PMID:16185270","DOID:0110702"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marie Unna hereditary hypotrichosis","termid":"MONDO:0018631"},{"relation_name":"is_a","term_name":"Marie Unna hereditary hypotrichosis","termid":"MONDO:0018631"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 5","secondary_identifiers":["GARD:15585","OMIM:612841","MEDGEN:440568","MESH:C567554","UMLS:C2748535"],"synonyms":[{"name":"HYPT5","type":"exact"},{"name":"MUHH2","type":"exact"},{"name":"Marie Unna hereditary hypotrichosis 2","type":"exact"},{"name":"Muhh2","type":"exact"},{"name":"hypotrichosis 5","type":"exact"},{"name":"hypotrichosis type 5","type":"exact"},{"name":"hypt5","type":"exact"}],"termid":"MONDO:0013017","xrefs":{"Monarch":{"xref_id":"0013017"}}}


id: PBO:0040659
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Bardet-Biedl syndrome 4","termid":"PBO:0040659"}


id: PBO:0060683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NDRG family member 3","termid":"PBO:0060683"}


id: GO:0006723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of hydrocarbons that make up the cuticle, the outer layer of some animals and plants, which acts to prevent water loss.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrocarbon biosynthetic process","termid":"GO:0120251"},{"relation_name":"part_of","term_name":"cuticle development","termid":"GO:0042335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cuticle hydrocarbon biosynthetic process","synonyms":[{"name":"cuticle hydrocarbon anabolism","type":"exact"},{"name":"cuticle hydrocarbon biosynthesis","type":"exact"},{"name":"cuticle hydrocarbon formation","type":"exact"},{"name":"cuticle hydrocarbon synthesis","type":"exact"}],"termid":"GO:0006723"}


id: MONDO:0004880
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease in which the causes of the disease is a perturbation of the lower digestive tract leading to its dysfunction.","definition_xrefs":["MONDO:patterns/disease_by_dysfunctional_structure"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"bowel dysfunction","secondary_identifiers":["ICD9:564.9","DOID:9779","MEDGEN:384468","SCTID:235594008","UMLS:C2004461"],"synonyms":[{"name":"disease of lower digestive tract","type":"exact"},{"name":"lower digestive tract disease","type":"exact"}],"termid":"MONDO:0004880","xrefs":{"Monarch":{"xref_id":"0004880"}}}


id: GO:1904784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a NLRP1 inflammasome complex.","definition_xrefs":["GOC:TermGenie","PMID:19124602","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0023052","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"NLRP1 inflammasome complex assembly","synonyms":[{"name":"NALP1 inflammasome complex assembly","type":"exact"},{"name":"NALP1 inflammasome complex formation","type":"exact"},{"name":"NLRP1 inflammasome complex formation","type":"exact"}],"termid":"GO:1904784"}


id: GO:0042852
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113287],"is_not":false,"summary":null,"term":"GO:0042852"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of L-alanine, the L-enantiomer of 2-aminopropanoic acid, i.e. (2S)-2-aminopropanoic acid.","definition_xrefs":["GOC:mah","GOC:jl","GOC:jsg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alanine biosynthetic process","termid":"GO:0006523"},{"relation_name":"is_a","term_name":"pyruvate family amino acid biosynthetic process","termid":"GO:0009079"},{"relation_name":"is_a","term_name":"L-alanine metabolic process","termid":"GO:0042851"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"L-alanine biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"L-alanine anabolism","type":"exact"},{"name":"L-alanine biosynthesis","type":"exact"},{"name":"L-alanine formation","type":"exact"},{"name":"L-alanine synthesis","type":"exact"}],"termid":"GO:0042852","terms_by_termid":{"GO:0042852":null}}


id: PBO:0039105
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AT-hook DNA binding motif containing 1","termid":"PBO:0039105"}


id: MONDO:0010293
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inborn error of immunity","termid":"MONDO:0003778"},{"relation_name":"is_a","term_name":"hypohidrotic ectodermal dysplasia","termid":"MONDO:0016535"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005046"],"is_obsolete":false,"name":"ectodermal dysplasia and immune deficiency","secondary_identifiers":["OMIMPS:300291","NANDO:2200761","UMLS:C1846006","MESH:C536181","MEDGEN:375786","DOID:0081077","NANDO:1200360","NCIT:C118844","GARD:9936","SCTID:703525006","Orphanet:98813"],"synonyms":[{"name":"EDA-ID","type":"exact"},{"name":"HED-ID","type":"exact"},{"name":"Xhm-Ed","type":"related"},{"name":"anhidrotic ectodermal dysplasia with immune deficiency","type":"exact"},{"name":"anhidrotic ectodermal dysplasia with immunodeficiency","type":"exact"},{"name":"ectodermal dysplasia, anhidrotic, with immune deficiency","type":"related"},{"name":"ectodermal dysplasia, hypohidrotic, with immune deficiency","type":"related"},{"name":"hyper-IgM immunodeficiency, X-linked, with hypohidrotic ectodermal dysplasia","type":"related"},{"name":"hypohidrotic ectodermal dysplasia with immune deficiency","type":"exact"},{"name":"hypohidrotic ectodermal dysplasia with immunodeficiency","type":"exact"}],"termid":"MONDO:0010293","xrefs":{"Monarch":{"xref_id":"0010293"}}}


id: PATO:0001718
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A quality that exists by virtue of the luminous intensity per unit area projected in a given direction.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Luminance"],"direct_ancestors":[{"relation_name":"is_a","term_name":"luminous flux","termid":"PATO:0001296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"luminance","termid":"PATO:0001718"}


id: PBO:0005848
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aspartate semialdehyde dehydrogenase (predicted)","termid":"PBO:0005848"}


id: PR:O74808
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr1 gene.","definition_xrefs":["UniProtKB:O74808","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cryptic loci regulator protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC2D10.17","synonyms":[{"name":"Spom972h-clr1","type":"exact"}],"termid":"PR:O74808"}


id: GO:0110075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ferroptosis.","definition_xrefs":["PMID:25402683","GOC:sp","PMID:24439385","PMID:29290465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of programmed cell death","termid":"GO:0043067"},{"relation_name":"regulates","term_name":"ferroptosis","termid":"GO:0097707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of ferroptosis","termid":"GO:0110075"}


id: PR:Q9USZ6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An mRNA turnover protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR21141:SF1","PRO:DNx","OMA:SCHPO02987"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome assembly factor mrt4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC11G11.03","secondary_identifiers":["UniProtKB:Q9USZ6"],"synonyms":[{"name":"Spom972h-MRTO4","type":"exact"},{"name":"mRNA turnover protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9USZ6"}


id: MONDO:0006450
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Acute myeloid leukemias, myelodysplastic syndromes, and myelodysplastic/myeloproliferative neoplasms arising as a result of the mutagenic effect of chemotherapy agents and/or radiation that are used for the treatment of neoplastic or non-neoplastic disorders.","definition_xrefs":["NCIT:C27912"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloproliferative neoplasm","termid":"MONDO:0020076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"therapy-related myeloid neoplasm","secondary_identifiers":["ONCOTREE:TMN","ICDO:9920/3","EFO:1000575"],"synonyms":[{"name":"TMN","type":"related"},{"name":"acute myeloid Leukaemias and myelodysplastic syndromes, therapy-related","type":"exact"},{"name":"therapy-related AML and MDS","type":"exact"},{"name":"therapy-related acute myeloid leukaemia and myelodysplastic syndrome","type":"exact"},{"name":"therapy-related acute myeloid leukemia and myelodysplastic syndrome","type":"exact"},{"name":"therapy-related myeloid neoplasm","type":"exact"},{"name":"therapy-related myeloid neoplasms","type":"related"}],"termid":"MONDO:0006450","xrefs":{"Monarch":{"xref_id":"0006450"}}}


id: MONDO:0009219
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"stiff skin syndrome","termid":"MONDO:0008492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"fascial dystrophy, congenital","secondary_identifiers":["MEDGEN:226997","ICD9:709.8","UMLS:C1302740","MESH:C563219","SCTID:399948007","OMIM:228020","GARD:15171"],"synonyms":[{"name":"fascial dystrophy, congenital","type":"exact"}],"termid":"MONDO:0009219","xrefs":{"Monarch":{"xref_id":"0009219"}}}


id: PBO:0064413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6F","termid":"PBO:0064413"}


id: PBO:0086099
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein related to mammalian high mobility group (HMG) proteins; nuclear protein; essential for function of H/ACA-type snoRNPs, which are involved in 18S rRNA processing","termid":"PBO:0086099"}


id: PR:Q10181
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rit1 gene.","definition_xrefs":["UniProtKB:Q10181","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C3F10.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3F10.06c","synonyms":[{"name":"Spom972h-rit1","type":"exact"}],"termid":"PR:Q10181"}


id: PBO:0075630
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small proline rich protein 1B","termid":"PBO:0075630"}


id: PBO:0080516
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WASP family member 3","termid":"PBO:0080516"}


id: GO:0050894
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which an emotional response is associated with a particular sensory stimulation.","definition_xrefs":["ISBN:0721662544","GOC:dph","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory processing","termid":"GO:0050893"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"determination of affect","termid":"GO:0050894"}


id: PBO:0026944
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_centromere_clustering_resulting_in_centromere-spindle_pole_body_colocalization","termid":"PBO:0026944"}


id: GO:0045755
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops or prevents the activation, by acetate, of the chemical reactions and pathways resulting in the breakdown of acetate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of initiation of acetate catabolic process by acetate","termid":"GO:0045147"},{"relation_name":"is_a","term_name":"negative regulation of response to acetate","termid":"GO:1901458"},{"relation_name":"negatively_regulates","term_name":"initiation of acetate catabolic process by acetate","termid":"GO:0045146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"negative regulation of initiation of acetate catabolic process by acetate","synonyms":[{"name":"down regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"down-regulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"downregulation of initiation of acetate catabolic process by acetate","type":"exact"},{"name":"inhibition of initiation of acetate catabolic process by acetate","type":"narrow"},{"name":"negative regulation of initiation of acetate breakdown by acetate","type":"exact"},{"name":"negative regulation of initiation of acetate degradation by acetate","type":"exact"}],"termid":"GO:0045755"}


id: PBO:0113080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cysteine aminopeptidase with homocysteine-thiolactonase activity; protects cells against homocysteine toxicity; cytosolic protein, selectively transported to vacuole during nitrogen starvation; targeted to vacuole via CVT pathway; has bleomycin hydrolase activity in vitro; transcription is regulated by galactose via Gal4p; orthologous to human BLMH","termid":"PBO:0113080"}


id: PBO:0042999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromogranin B","termid":"PBO:0042999"}


id: MOD:01354
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an N4 hydrogen atom of an asparagine residue with a carbohydrate-like group composed of Hex1HexNAc1NeuAc1 linked through a glycosidic bond.","definition_xrefs":["Unimod:149#N","PubMed:11698400"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"Hex1HexNAc1NeuAc1 glycosylated residue","termid":"MOD:00517"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"Hex1HexNAc1NeuAc1 N4-glycosylated asparagine","synonyms":[{"name":"Hex(1)HexNAc(1)NeuAc(1)","type":"related"},{"name":"Hex1HexNAc1NeuAc1","type":"related"}],"termid":"MOD:01354"}


id: GO:0047425
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxy-1-pyrroline-2-carboxylate + H2O + H+ = 2,5-dioxopentanoate + NH4.","definition_xrefs":["EC:3.5.4.22","RHEA:10560"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines","termid":"GO:0016814"},{"relation_name":"is_a","term_name":"deaminase activity","termid":"GO:0019239"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"1-pyrroline-4-hydroxy-2-carboxylate deaminase activity","secondary_identifiers":["MetaCyc:3.5.4.22-RXN","KEGG_REACTION:R02280"],"synonyms":[{"name":"1-pyrroline-4-hydroxy-2-carboxylate aminohydrolase (decyclizing)","type":"related"},{"name":"HPC deaminase activity","type":"related"}],"termid":"GO:0047425"}


id: MONDO:0007271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial cutaneous collagenoma is a connective tissue nevus characterized by multiple, flesh-colored asymptomatic nodules distributed symmetrically on the trunk and upper arms (mainly on the upper two-thirds of the back), manifesting around adolescence. The skin biopsy reveals an accumulation of collagen fibers with reduction in the number of elastic fibers. Cardiac anomalies may be observed. Familial cutaneous collagenoma follows an autosomal dominant mode of transmission.","definition_xrefs":["Orphanet:53296"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermis disorder","termid":"MONDO:0021154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"familial cutaneous collagenoma","secondary_identifiers":["GARD:9799","MEDGEN:96073","UMLS:C0406817","MESH:C562925","icd11.foundation:982220551","OMIM:115250","SCTID:239139000"],"synonyms":[{"name":"collagenoma, familial cutaneous","type":"related"}],"termid":"MONDO:0007271","xrefs":{"Monarch":{"xref_id":"0007271"}}}


id: MONDO:0005154
data:
  {"annotated_genes":["SJAG_04956","SJAG_01841","SJAG_00409","SJAG_04944","SJAG_02876","SJAG_03011","SJAG_02049","SJAG_00358","SJAG_03535","SJAG_02896","SJAG_00175","SJAG_01012","SJAG_05194","SJAG_01950","SJAG_03363","SJAG_01166","SJAG_00938","SJAG_01372","SJAG_02015","SJAG_04109","SJAG_03961"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87510],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013111"},{"annotations":[87294],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008294"},{"annotations":[88777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[89042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[88975,88976],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[87852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[87694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[88627],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007256"},{"annotations":[87844],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007369"},{"annotations":[87899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0024568"},{"annotations":[87106],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014659"},{"annotations":[88838],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032844"},{"annotations":[88108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008265"},{"annotations":[88047],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014860"},{"annotations":[87081],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0054743"},{"annotations":[87439],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013000"},{"annotations":[88907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"},{"annotations":[87130],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008319"},{"annotations":[88644,88645],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013771"},{"annotations":[87713],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008297"},{"annotations":[88363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0957577"},{"annotations":[88707],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010420"}]},"cv_name":"mondo","definition":"A disease involving the liver.","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatobiliary disorder","termid":"MONDO:0002515"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":21,"genes_by_uniquename":{"SJAG_00175":null,"SJAG_00358":null,"SJAG_00409":null,"SJAG_00938":null,"SJAG_01012":null,"SJAG_01166":null,"SJAG_01372":null,"SJAG_01841":null,"SJAG_01950":null,"SJAG_02015":null,"SJAG_02049":null,"SJAG_02876":null,"SJAG_02896":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_03535":null,"SJAG_03961":null,"SJAG_04109":null,"SJAG_04944":null,"SJAG_04956":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0002515","MONDO:0004335"],"is_obsolete":false,"name":"liver disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:573.8","UMLS:C4021780","ICD9:573.9","MEDGEN:893061","ICD10CM:K70-K77","NCIT:C3196","EFO:0001421","DOID:409","MESH:D008107","SCTID:235856003"],"synonyms":[{"name":"disease of liver","type":"exact"},{"name":"disease or disorder of liver","type":"exact"},{"name":"disorder of liver","type":"exact"},{"name":"hepatic disease","type":"exact"},{"name":"hepatic disorder","type":"exact"},{"name":"liver and intrahepatic bile duct disorder","type":"exact"},{"name":"liver disease","type":"exact"},{"name":"liver disease or disorder","type":"exact"},{"name":"liver disorder","type":"exact"}],"termid":"MONDO:0005154","terms_by_termid":{"MONDO:0007256":null,"MONDO:0007369":null,"MONDO:0008265":null,"MONDO:0008294":null,"MONDO:0008296":null,"MONDO:0008297":null,"MONDO:0008319":null,"MONDO:0010420":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013000":null,"MONDO:0013111":null,"MONDO:0013771":null,"MONDO:0013995":null,"MONDO:0014659":null,"MONDO:0014860":null,"MONDO:0024568":null,"MONDO:0030810":null,"MONDO:0031040":null,"MONDO:0032844":null,"MONDO:0054743":null,"MONDO:0957577":null},"xrefs":{"Monarch":{"xref_id":"0005154"}}}


id: GO:0048026
data:
  {"annotated_genes":["SJAG_03279","SJAG_02018","SJAG_02058","SJAG_01040","SJAG_00996","SJAG_01919"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75976,77277,94170,112979],"is_not":false,"summary":null,"term":"GO:0048026"},{"annotations":[120495,91485],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905746"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the rate or extent of mRNA splicing via a spliceosomal mechanism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of RNA splicing","termid":"GO:0033120"},{"relation_name":"is_a","term_name":"regulation of mRNA splicing, via spliceosome","termid":"GO:0048024"},{"relation_name":"is_a","term_name":"positive regulation of mRNA processing","termid":"GO:0050685"},{"relation_name":"positively_regulates","term_name":"mRNA splicing, via spliceosome","termid":"GO:0000398"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00996":null,"SJAG_01040":null,"SJAG_01919":null,"SJAG_02018":null,"SJAG_02058":null,"SJAG_03279":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0016071"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0016071","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of mRNA splicing, via spliceosome","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0035057"],"synonyms":[{"name":"activation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"activation of nuclear mRNA splicing, via spliceosome","type":"narrow"},{"name":"positive regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"positive regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"positive regulation of pre-mRNA splicing","type":"broad"},{"name":"stimulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"stimulation of nuclear mRNA splicing, via spliceosome","type":"narrow"},{"name":"up regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"up regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"up-regulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"up-regulation of nuclear mRNA splicing, via spliceosome","type":"exact"},{"name":"upregulation of nuclear mRNA splicing via U2-type spliceosome","type":"narrow"},{"name":"upregulation of nuclear mRNA splicing, via spliceosome","type":"exact"}],"termid":"GO:0048026","terms_by_termid":{"GO:0048026":null,"GO:1905746":null}}


id: MONDO:0001289
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete endometriosis of ovary (obsolete MONDO:0001289)","termid":"MONDO:0001289","xrefs":{"Monarch":{"xref_id":"0001289"}}}


id: MONDO:0012798
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deafness, unilateral, with delayed endolymphatic hydrops","secondary_identifiers":["UMLS:C2677512","MEDGEN:393762","MESH:C567420","OMIM:612097"],"synonyms":[{"name":"deafness, unilateral, with delayed endolymphatic hydrops","type":"exact"}],"termid":"MONDO:0012798","xrefs":{"Monarch":{"xref_id":"0012798"}}}


id: PBO:0028607
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation_during_vegetative_growth","termid":"PBO:0028607"}


id: PBO:0051793
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing J","termid":"PBO:0051793"}


id: MONDO:0012062
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the ABCC9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 1O","secondary_identifiers":["GARD:15434","DOID:0110451","MESH:C563906","MEDGEN:325268","OMIM:608569","UMLS:C1837839"],"synonyms":[{"name":"ABCC9 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"CMD1O","type":"exact"},{"name":"cardiomyopathy, dilated, 1O","type":"related"},{"name":"cardiomyopathy, dilated, type 1O","type":"exact"},{"name":"cardiomyopathy, dilated, with ventricular tachycardia","type":"related"},{"name":"dilated cardiomyopathy type 1O","type":"exact"},{"name":"dilated cardiomyopathy with ventricular tachycardia","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in ABCC9","type":"exact"}],"termid":"MONDO:0012062","xrefs":{"Monarch":{"xref_id":"0012062"}}}


id: PBO:0003679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L26 (predicted)","termid":"PBO:0003679"}


id: PBO:0001069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPR repeat protein, involved in mitochondrial protein turnover (predicted)","termid":"PBO:0001069"}


id: PBO:0059769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-CO3 pseudogene 43","termid":"PBO:0059769"}


id: PBO:0039936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 40","termid":"PBO:0039936"}


id: GO:0001801
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of type IIb hypersensitivity, a type of inflammatory response.","definition_xrefs":["GOC:add","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of type IIb hypersensitivity","termid":"GO:0001799"},{"relation_name":"is_a","term_name":"positive regulation of type II hypersensitivity","termid":"GO:0002894"},{"relation_name":"positively_regulates","term_name":"type IIb hypersensitivity","termid":"GO:0001795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of type IIb hypersensitivity","synonyms":[{"name":"activation of type IIb hypersensitivity","type":"narrow"},{"name":"stimulation of type IIb hypersensitivity","type":"narrow"},{"name":"up regulation of type IIb hypersensitivity","type":"exact"},{"name":"up-regulation of type IIb hypersensitivity","type":"exact"},{"name":"upregulation of type IIb hypersensitivity","type":"exact"}],"termid":"GO:0001801"}


id: MONDO:1010530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cleft palate that occurs in cattle.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cleft palate, non-human animal","termid":"MONDO:1010037"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cleft palate, cattle","secondary_identifiers":["OMIA:000197-9913"],"termid":"MONDO:1010530","xrefs":{"Monarch":{"xref_id":"1010530"}}}


id: PBO:0059033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"matrix metallopeptidase 23A (pseudogene)","termid":"PBO:0059033"}


id: FYPO:0005906
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cgontractile ring contraction begins at the normal (i.e. indistinguishable from wild type) time relative to other cell cycle events.","definition_xrefs":["PMID:19570908","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal actin cytoskeleton organization","termid":"FYPO:0001366"},{"relation_name":"is_a","term_name":"normal actomyosin contractile ring contraction","termid":"FYPO:0004097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000257","FYPO:0001312"],"is_obsolete":false,"name":"normal onset of actomyosin contractile ring contraction","synonyms":[{"name":"normal dwell time before actomyosin contractile ring contraction","type":"exact"},{"name":"normal onset of actomyosin contractile ring contraction during mitotic cell cycle","type":"related"},{"name":"normal onset of actomyosin contractile ring contraction during vegetative growth","type":"exact"},{"name":"normal onset of contractile ring contraction","type":"exact"},{"name":"normal onset of cytokinetic contractile ring contraction","type":"exact"},{"name":"normal onset of cytokinetic ring contraction","type":"related"},{"name":"normal onset of mitotic contractile ring contraction","type":"exact"},{"name":"normal timing of actomyosin contractile ring contraction","type":"related"}],"termid":"FYPO:0005906"}


id: GO:0033010
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A highly specialized cell-cell junction found in vertebrates, which forms between a neuron and a glial cell, and has structural similarity to Drosophila septate junctions. It flanks the node of Ranvier in myelinated nerve and electrically isolates the myelinated from unmyelinated nerve segments and physically separates the voltage-gated sodium channels at the node from the cluster of potassium channels underneath the myelin sheath.","definition_xrefs":["PMID:11395001","PMID:14630217"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell junction","termid":"GO:0005911"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"paranodal junction","synonyms":[{"name":"axoglial septate junction","type":"exact"},{"name":"paranodal axoglial junction","type":"exact"},{"name":"paranodal septate junction","type":"exact"}],"termid":"GO:0033010"}


id: MONDO:0007965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial melanoma","termid":"MONDO:0018961"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"melanoma, malignant familial intraocular","secondary_identifiers":["MEDGEN:322559","MESH:C563596","OMIM:155700","UMLS:C1835043","GARD:18576"],"synonyms":[{"name":"melanoma, malignant familial intraocular","type":"exact"}],"termid":"MONDO:0007965","xrefs":{"Monarch":{"xref_id":"0007965"}}}


id: PBO:0029628
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_sister_chromatid_cohesion","termid":"PBO:0029628"}


id: GO:0017162
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to an aryl hydrocarbon receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor binding","termid":"GO:0005102"},{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"aryl hydrocarbon receptor binding","termid":"GO:0017162"}


id: FYPO:0007034
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of phenylglyoxal than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to phenylglyoxal","synonyms":[{"name":"resistance to 2-oxo-2-phenylacetaldehyde","type":"exact"},{"name":"resistance to phenylglyoxal during mitotic cell cycle","type":"related"},{"name":"resistance to phenylglyoxal during vegetative growth","type":"exact"},{"name":"resistant to phenylglyoxal","type":"exact"}],"termid":"FYPO:0007034"}


id: GO:1990103
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein-DNA complex containing DNA-bound DnaA attached to HU. HU is a dimer encoded by two closely related genes. Essential for the initiation of replication in bacteria; stimulates the DnaA-dependent unwinding of oriC.","definition_xrefs":["GOC:bhm","PMID:18179598"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primosome complex","termid":"GO:1990077"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005694"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005694"],"is_obsolete":false,"name":"DnaA-HU complex","synonyms":[{"name":"DnaA-HU-DNA complex","type":"exact"}],"termid":"GO:1990103"}


id: GO:0015018
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-O-(beta-D-galactosyl-(1->3)-beta-D-galactosyl-(1->4)-beta-D-xylosyl)-L-seryl-[protein] + UDP-alpha-D-glucuronate = 3-O-(beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl)-L-seryl-[protein] + H+ + UDP.","definition_xrefs":["EC:2.4.1.135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucuronosyltransferase activity","termid":"GO:0015020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016757","GO:0016740"],"is_obsolete":false,"name":"galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity","secondary_identifiers":["Reactome:R-HSA-3560802","RHEA:24168","Reactome:R-HSA-9638064","MetaCyc:2.4.1.135-RXN","Reactome:R-HSA-1889955"],"synonyms":[{"name":"UDP-glucuronate:3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosyl-protein D-glucuronosyltransferase activity","type":"related"},{"name":"UDPglucuronate:3-beta-D-galactosyl-4-beta-D-galactosyl-O-beta-D-xylosyl-protein D-glucuronosyltransferase activity","type":"related"},{"name":"glucuronosyltransferase I activity","type":"narrow"},{"name":"uridine diphosphate glucuronic acid:acceptor glucuronosyltransferase activity","type":"related"}],"termid":"GO:0015018"}


id: MOD:01563
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue with the Applied Biosystems iTRAQ8plex-118 reporter+balance group.","definition_xrefs":["Unimod:731"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(13)C isotope tagged reagent","termid":"MOD:01428"},{"relation_name":"is_a","term_name":"(15)N isotope tagged reagent","termid":"MOD:01429"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent acylated residue","termid":"MOD:01526"},{"relation_name":"is_a","term_name":"modifications with monoisotopic mass differences that are nominally equal at 304.199039 Da","termid":"MOD:01584"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-118 reporter+balance reagent acylated residue","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"},{"name":"Accurate mass for 115, 118, 119 & 121","type":"related"},{"name":"Applied Biosystems iTRAQ(TM) multiplexed quantitation chemistry","type":"related"},{"name":"iTRAQ8plex:13C(6)15N(2)","type":"related"}],"termid":"MOD:01563"}


id: MONDO:0043168
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fibrous dysplasia","termid":"MONDO:0000845"},{"relation_name":"is_a","term_name":"primary myelofibrosis","termid":"MONDO:0009692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0004992","MONDO:0005570","MONDO:0002280"],"is_obsolete":false,"name":"panostotic fibrous dysplasia","secondary_identifiers":["MEDGEN:419799","UMLS:C2931430","MESH:C537164"],"synonyms":[{"name":"unusual facial appearance, bone fragility, hyperphosphatasemia, and hypophosphatemia","type":"related"}],"termid":"MONDO:0043168","xrefs":{"Monarch":{"xref_id":"0043168"}}}


id: PBO:0113456
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of mitochondrial NAD(+)-dependent isocitrate dehydrogenase; complex catalyzes oxidation of isocitrate to alpha-ketoglutarate in TCA cycle; targeted to vacuole via AP-3 pathway","termid":"PBO:0113456"}


id: GO:0097465
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Spine emanating from the cell soma of a neuron.","definition_xrefs":["NIF_Subcellular:sao2048514053"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron spine","termid":"GO:0044309"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"somatic spine","termid":"GO:0097465"}


id: MONDO:0003055
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A WHO grade I meningioma characterized by the presence of epithelial differentiation and numerous intracellular PAS positive bodies that are rich in glycogen.","definition_xrefs":["NCIT:C4718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meningioma","termid":"MONDO:0016642"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory meningioma","secondary_identifiers":["MEDGEN:277998","DOID:4588","UMLS:C1384406"],"synonyms":[{"name":"secretory meningioma","type":"exact"},{"name":"secretory meningioma (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0003055","xrefs":{"Monarch":{"xref_id":"0003055"}}}


id: PBO:0055167
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2589","termid":"PBO:0055167"}


id: PBO:0044228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cubilin pseudogene 2","termid":"PBO:0044228"}


id: MONDO:0002190
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that arises from eccrine ducts in the vulva and is characterized by the presence of tubules and cysts which are lined by epithelial cells in the densely fibrotic dermis.","definition_xrefs":["NCIT:C40311"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vulvar benign neoplasm","termid":"MONDO:0000643"},{"relation_name":"is_a","term_name":"syringoma","termid":"MONDO:0002191"},{"relation_name":"is_a","term_name":"benign neoplasm of sweat gland","termid":"MONDO:0021489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"vulvar syringoma","secondary_identifiers":["DOID:2064","MEDGEN:311490","UMLS:C1520099"],"synonyms":[{"name":"mammalian vulva syringoma","type":"exact"},{"name":"syringoma of mammalian vulva","type":"exact"},{"name":"vulvar syringoma","type":"exact"}],"termid":"MONDO:0002190","xrefs":{"Monarch":{"xref_id":"0002190"}}}


id: GO:0045875
data:
  {"annotated_genes":["SJAG_00369","SJAG_05978","SJAG_01825","SJAG_01716","SJAG_03591","SJAG_00823"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93755,108288,108386,108612,109441,117397],"is_not":false,"summary":null,"term":"GO:0045875"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of sister chromatid cohesion.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of sister chromatid cohesion","termid":"GO:0007063"},{"relation_name":"is_a","term_name":"negative regulation of cell cycle process","termid":"GO:0010948"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"sister chromatid cohesion","termid":"GO:0007062"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00369":null,"SJAG_00823":null,"SJAG_01716":null,"SJAG_01825":null,"SJAG_03591":null,"SJAG_05978":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"negative regulation of sister chromatid cohesion","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of sister chromatid cohesion","type":"exact"},{"name":"down-regulation of sister chromatid cohesion","type":"exact"},{"name":"downregulation of sister chromatid cohesion","type":"exact"},{"name":"inhibition of sister chromatid cohesion","type":"narrow"}],"termid":"GO:0045875","terms_by_termid":{"GO:0045875":null}}


id: MONDO:0013238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"17q23.1q23.2 microdeletion syndrome is a recently described syndrome characterized by developmental delay, microcephaly, short stature, heart defects and limb abnormalities.","definition_xrefs":["Orphanet:261279"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the long arm of chromosome 17","termid":"MONDO:0016915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 17q23.1-q23.2 deletion syndrome","secondary_identifiers":["DOID:0060405","MEDGEN:461957","OMIM:613355","GARD:10936","SCTID:719584008","UMLS:C3150607"],"synonyms":[{"name":"17q23.1-q23.2 microdeletion syndrome","type":"exact"},{"name":"17q23.1q23.2 microdeletion syndrome","type":"exact"},{"name":"Del(17)(q23.1q23.2)","type":"exact"},{"name":"chromosome 17q23.1-q23.2 deletion syndrome","type":"exact"},{"name":"chromosome 17q23.1-q23.2 deletion syndrome, isolated cases","type":"exact"},{"name":"monosomy 17q23.1-q23.2","type":"exact"},{"name":"monosomy 17q23.1q23.2","type":"exact"}],"termid":"MONDO:0013238","xrefs":{"Monarch":{"xref_id":"0013238"}}}


id: SO:0000623
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that can be transcribed into a small nuclear RNA (snRNA).","direct_ancestors":[{"relation_name":"is_a","term_name":"non_protein_coding","termid":"SO:0000011"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"snRNA_encoding","synonyms":[{"name":"snRNA encoding","type":"exact"}],"termid":"SO:0000623"}


id: GO:1901663
data:
  {"annotated_genes":["SJAG_01672","SJAG_06603","SJAG_01668","SJAG_04568","SJAG_01865","SJAG_04642","SJAG_00933","SJAG_01820","SJAG_01043","SJAG_00459","SJAG_04000","SJAG_00721","SJAG_01866"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91200],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1904775"},{"annotations":[75816,81117,64996,89717,121533,121532,80744,78578,74377,74945,76085,76220],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006744"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of quinone.","definition_xrefs":["GOC:mb","GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"quinone metabolic process","termid":"GO:1901661"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00459":null,"SJAG_00721":null,"SJAG_00933":null,"SJAG_01043":null,"SJAG_01668":null,"SJAG_01672":null,"SJAG_01820":null,"SJAG_01865":null,"SJAG_01866":null,"SJAG_04000":null,"SJAG_04568":null,"SJAG_04642":null,"SJAG_06603":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"quinone biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null,"PMID:29191091":null},"secondary_identifiers":["GO:0045426"],"synonyms":[{"name":"quinone anabolism","type":"exact"},{"name":"quinone biosynthesis","type":"exact"},{"name":"quinone cofactor anabolism","type":"related"},{"name":"quinone cofactor biosynthesis","type":"related"},{"name":"quinone cofactor biosynthetic process","type":"related"},{"name":"quinone cofactor formation","type":"related"},{"name":"quinone cofactor synthesis","type":"related"},{"name":"quinone formation","type":"exact"},{"name":"quinone synthesis","type":"exact"}],"termid":"GO:1901663","terms_by_termid":{"GO:0006744":null,"GO:1904775":null}}


id: PBO:0062812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 9 pseudogene 3","termid":"PBO:0062812"}


id: FYPO:0003770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transcription regulation phenotype in which pheromone-responsive positive regulation of transcription from an RNA polymerase II promoter is decreased.","definition_xrefs":["GO:0007329","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal positive regulation of transcription","termid":"FYPO:0000623"},{"relation_name":"is_a","term_name":"abnormal transcriptional response to pheromone","termid":"FYPO:0000984"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002","FYPO:0000298","FYPO:0006551","FYPO:0005447"],"is_obsolete":false,"name":"decreased transcriptional response to pheromone","synonyms":[{"name":"decreased positive regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"},{"name":"reduced positive regulation of transcription from RNA polymerase II promoter by pheromones","type":"exact"}],"termid":"FYPO:0003770"}


id: MONDO:0034981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare ophthalmic disorder characterized by a usually congenital and unilateral round or oval, gray, white, or yellowish depression in the optic disk. There may be more than one pit present in one eye, and the anomaly is most commonly found in the inferotemporal region of the optic disk, although any sector may be involved. Patients are often asymptomatic, or may present with visual field defects, in particular paracentral arcuate scotoma connected to an enlarged blind spot. A number of patients develop serous macular detachment, with loss of vision typically becoming apparent in the third or fourth decade of life. [Orphanet:519404]","definition_xrefs":["Orphanet:519404"],"gene_count":0,"genotype_count":0,"name":"obsolete optic disk pit (obsolete MONDO:0034981)","secondary_identifiers":["ICD10CM:Q14.2"],"termid":"MONDO:0034981","xrefs":{"Monarch":{"xref_id":"0034981"}}}


id: PR:O94574
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC1773.17c gene.","definition_xrefs":["UniProtKB:O94574","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-hydroxyacid dehydrogenase C1773.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1773.17c","synonyms":[{"name":"Spom972h-SPBC1773.17c","type":"exact"}],"termid":"PR:O94574"}


id: PBO:0049427
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GUSB pseudogene 4","termid":"PBO:0049427"}


id: PBO:0003484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptide N-glycanase (predicted)","termid":"PBO:0003484"}


id: PBO:0081150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP90 zinc finger protein","termid":"PBO:0081150"}


id: PBO:0052246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 15","termid":"PBO:0052246"}


id: PBO:0113171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Integral vacuolar membrane protein; involved in vacuole inheritance and morphology; activates Fab1p kinase activity under basal conditions and also after hyperosmotic shock; targeted to vacuole via AP-3 pathway","termid":"PBO:0113171"}


id: GO:0031110
data:
  {"annotated_genes":["SJAG_02045","SJAG_04312"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72673],"is_not":false,"summary":null,"term":"GO:0031110"},{"annotations":[103870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of microtubule polymerization or depolymerization by the addition or removal of tubulin heterodimers from a microtubule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of microtubule cytoskeleton organization","termid":"GO:0070507"},{"relation_name":"regulates","term_name":"microtubule polymerization or depolymerization","termid":"GO:0031109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02045":null,"SJAG_04312":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0000226","GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of microtubule polymerization or depolymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031110","terms_by_termid":{"GO:0031110":null,"GO:0031117":null}}


id: PBO:0004538
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptionally regulated by Phx1","termid":"PBO:0004538"}


id: GO:2000126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of octopamine or tyramine signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of G protein-coupled receptor signaling pathway","termid":"GO:0045744"},{"relation_name":"is_a","term_name":"regulation of octopamine or tyramine signaling pathway","termid":"GO:2000125"},{"relation_name":"negatively_regulates","term_name":"octopamine or tyramine signaling pathway","termid":"GO:0007211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of octopamine or tyramine signaling pathway","synonyms":[{"name":"negative regulation of octopamine or tyramine signalling pathway","type":"exact"},{"name":"negative regulation of octopamine/tyramine signaling pathway","type":"exact"}],"termid":"GO:2000126"}


id: PR:Q09746
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An F-BAR and double SH3 domains protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein BZZ1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12C2.05c","secondary_identifiers":["UniProtKB:Q09746"],"synonyms":[{"name":"SPBC12C2.05c","type":"related"},{"name":"Spom972h-FCHSD1","type":"exact"}],"termid":"PR:Q09746"}


id: PR:O42918
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- meu7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O42918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amylase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16A3.13","synonyms":[{"name":"1,4-alpha-D-glucan glucanohydrolase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-meu7","type":"exact"},{"name":"meiotic expression up-regulated protein 7 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O42918"}


id: GO:0052914
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine(1207) in 16S rRNA = N(2)-methylguanosine(1207) in 16S rRNA + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rRNA (guanine-N2-)-methyltransferase activity","termid":"GO:0008990"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016741","GO:0016740","GO:0003824","GO:0140098"],"is_obsolete":false,"name":"16S rRNA (guanine(1207)-N(2))-methyltransferase activity","secondary_identifiers":["RHEA:42736","MetaCyc:RXN-11576"],"synonyms":[{"name":"M(2)G1207 methyltransferase activity","type":"related"}],"termid":"GO:0052914"}


id: FYPO:0004212
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the kinetochore of a chromosome is decreased during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during meiosis","termid":"FYPO:0004762"},{"relation_name":"is_a","term_name":"decreased protein localization to centromere","termid":"FYPO:0006238"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased protein localization to kinetochore during meiosis I","synonyms":[{"name":"decreased protein localisation to kinetochore during meiosis I","type":"exact"},{"name":"decreased protein localization to kinetochore during first meiotic nuclear division","type":"exact"},{"name":"decreased protein localization to meiotic kinetochore during meiosis I","type":"exact"},{"name":"reduced protein localization to kinetochore during meiosis I","type":"exact"}],"termid":"FYPO:0004212"}


id: PBO:0047241
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 236 member A","termid":"PBO:0047241"}


id: PBO:0086502
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative positive regulator of mannosylphosphate transferase Mnn6p; involved in mannosylphosphorylation of N-linked oligosaccharides; may also function as a mannosylphosphate transferase; expression increases in late-logarithmic and stationary growth phases; coding sequence contains length polymorphisms in different strains; MNN4 has a paralog, YJR061W, that arose from the whole genome duplication","termid":"PBO:0086502"}


id: MONDO:1010498
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atrial fibrillation that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"atrial fibrillation, non-human animal","termid":"MONDO:1010024"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"atrial fibrillation, dog","secondary_identifiers":["OMIA:001181-9615"],"termid":"MONDO:1010498","xrefs":{"Monarch":{"xref_id":"1010498"}}}


id: GO:0002771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by an extracellular ligand binding to a inhibitory killer cell immunoglobulin-like receptor capable of inhibiting an immune effector process contributing to an immune response.","definition_xrefs":["PMID:15771571","ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune response-inhibiting cell surface receptor signaling pathway","termid":"GO:0002767"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"inhibitory killer cell immunoglobulin-like receptor signaling pathway","synonyms":[{"name":"KIR signaling pathway","type":"exact"},{"name":"inhibitory killer cell immunoglobulin-like receptor signalling pathway","type":"exact"},{"name":"killer cell inhibitory receptor signaling pathway","type":"exact"}],"termid":"GO:0002771"}


id: PBO:0049671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase 3","termid":"PBO:0049671"}


id: GO:0140299
data:
  {"annotated_genes":["SJAG_02853","SJAG_02187","SJAG_02613","SJAG_02267","SJAG_01419","SJAG_01620","SJAG_00642","SJAG_02183","SJAG_00331","SJAG_06621","SJAG_01807","SJAG_02945","SJAG_03903","SJAG_06622","SJAG_00027","SJAG_02226","SJAG_00792","SJAG_02135","SJAG_03828","SJAG_02657","SJAG_02708","SJAG_01587","SJAG_03715","SJAG_03405","SJAG_00757","SJAG_01410","SJAG_02748"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[57356,64431,69208,60997,66021,59458,58401,62258,65345,60616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140664"},{"annotations":[114919],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140786"},{"annotations":[96076],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140482"},{"annotations":[111007,111009,111011,111008,111012,113771,111010,111013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019826"},{"annotations":[97274],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140442"},{"annotations":[119600,121061],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140550"},{"annotations":[58460,67074,79822],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000155"},{"annotations":[116966],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032935"},{"annotations":[105451],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106219"}]},"cv_name":"molecular_function","definition":"Binding to a molecule and eliciting a change in the protein's activity in response to the intracellular level of that molecule.","definition_xrefs":["PMID:26328879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"molecular function regulator activity","termid":"GO:0098772"}],"gene_count":27,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00331":null,"SJAG_00642":null,"SJAG_00757":null,"SJAG_00792":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01587":null,"SJAG_01620":null,"SJAG_01807":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02187":null,"SJAG_02226":null,"SJAG_02267":null,"SJAG_02613":null,"SJAG_02657":null,"SJAG_02708":null,"SJAG_02748":null,"SJAG_02853":null,"SJAG_02945":null,"SJAG_03405":null,"SJAG_03715":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0098772"}],"interesting_parent_ids":["GO:0003674","GO:0098772"],"is_obsolete":false,"name":"molecular sensor activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"small molecular sensor activity","type":"exact"},{"name":"small molecule sensing activity","type":"exact"},{"name":"small molecule sensor activity","type":"narrow"}],"termid":"GO:0140299","terms_by_termid":{"GO:0000155":null,"GO:0019826":null,"GO:0032935":null,"GO:0106219":null,"GO:0140442":null,"GO:0140482":null,"GO:0140550":null,"GO:0140664":null,"GO:0140786":null}}


id: PBO:0038391
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-assayed_transcript","termid":"PBO:0038391"}


id: GO:0044448
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any constituent part of the cell cortex, the region of a cell that lies just beneath the plasma membrane and often, but not always, contains a network of actin filaments and associated proteins.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete cell cortex part (obsolete GO:0044448)","termid":"GO:0044448"}


id: GO:0140227
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by serotonin binding to a seratonin receptor on the surface of the target cell, followed by the movement of ions through a channel in the receptor complex. Ends with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:27764665","PMID:25392484","GOC:bhm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serotonin receptor signaling pathway","termid":"GO:0007210"},{"relation_name":"is_a","term_name":"ligand-gated ion channel signaling pathway","termid":"GO:1990806"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"serotonin-gated cation-selective signaling pathway","synonyms":[{"name":"5-HT-gated cation-selective signaling pathway","type":"exact"},{"name":"5-HT-gated cation-selective signalling pathway","type":"exact"},{"name":"5-hydroxytryptamine-gated cation-selective signaling pathway","type":"exact"},{"name":"5-hydroxytryptamine-gated cation-selective signalling pathway","type":"exact"},{"name":"serotonin-gated cation-selective signalling pathway","type":"exact"}],"termid":"GO:0140227"}


id: PBO:0073460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"surfactant protein A3, pseudogene","termid":"PBO:0073460"}


id: GO:0016752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a sinapoyl group to an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016746","GO:0003674","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"sinapoyltransferase activity","termid":"GO:0016752"}


id: GO:0002322
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a B cell population by cell division following B cell activation during an immune response.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell activation involved in immune response","termid":"GO:0002312"},{"relation_name":"is_a","term_name":"B cell proliferation","termid":"GO:0042100"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell proliferation involved in immune response","synonyms":[{"name":"B cell proliferation during immune response","type":"related"},{"name":"B lymphocyte proliferation during immune response","type":"related"},{"name":"B-cell proliferation during immune response","type":"related"},{"name":"B-lymphocyte proliferation during immune response","type":"related"}],"termid":"GO:0002322"}


id: PBO:0070505
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 4","termid":"PBO:0070505"}


id: GO:0021708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which neuroblasts acquire specialized structural and/or functional features that characterize the mature Lugaro cell. Differentiation includes the processes involved in commitment of a neuroblast to a Lugaro cell fate. A Lugaro cell is an inhibitory GABAergic interneuron found in the cerebellar cortex.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","PMID:15157725","GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation in hindbrain","termid":"GO:0021533"},{"relation_name":"is_a","term_name":"central nervous system neuron differentiation","termid":"GO:0021953"},{"relation_name":"is_a","term_name":"GABAergic neuron differentiation","termid":"GO:0097154"},{"relation_name":"part_of","term_name":"cerebellar cortex formation","termid":"GO:0021697"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Lugaro cell differentiation","termid":"GO:0021708"}


id: GO:0044557
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which the extent of smooth muscle contraction is reduced. Smooth muscle differs from striated muscle in the much higher actin/myosin ratio, the absence of conspicuous sarcomeres and the ability to contract to a much smaller fraction of its resting length.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"relaxation of muscle","termid":"GO:0090075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"relaxation of smooth muscle","synonyms":[{"name":"smooth muscle relaxation","type":"exact"}],"termid":"GO:0044557"}


id: GO:0045560
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of the TRAIL (TNF-related apoptosis inducing ligand) receptor.","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of TRAIL receptor biosynthetic process (obsolete GO:0045560)","synonyms":[{"name":"regulation of TRAIL receptor anabolism","type":"exact"},{"name":"regulation of TRAIL receptor biosynthesis","type":"exact"},{"name":"regulation of TRAIL receptor formation","type":"exact"},{"name":"regulation of TRAIL receptor synthesis","type":"exact"}],"termid":"GO:0045560"}


id: PBO:0058144
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4440","termid":"PBO:0058144"}


id: GO:0045444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of an adipocyte, an animal connective tissue cell specialized for the synthesis and storage of fat.","definition_xrefs":["GOC:go_curators","CL:0000136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell differentiation","termid":"GO:0030154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fat cell differentiation","synonyms":[{"name":"adipocyte cell differentiation","type":"exact"},{"name":"adipocyte differentiation","type":"exact"},{"name":"adipogenesis","type":"related"},{"name":"adipose cell differentiation","type":"exact"}],"termid":"GO:0045444"}


id: FYPO:0007100
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the first meiotic nuclear division is arrested in prophase I under conditions where arrest does not normally occur, and with telomeres clustered at the spindle pole body. Telomere clustering at the SPB indicates that the cell has reached or passed the pachytene stage.","definition_xrefs":["PomBase:mah","PMID:21449049"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormally arrested meiosis I","termid":"FYPO:0002817"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal cell cycle arrest in meiotic prophase I with clustered telomeres","synonyms":[{"name":"abnormal cell cycle arrest in meiotic prophase I at or after pachytene","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at SPB","type":"exact"},{"name":"abnormal cell cycle arrest in meiotic prophase I with telomeres clustered at spindle pole bodies","type":"exact"}],"termid":"FYPO:0007100"}


id: GO:0031590
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving wybutosine, 3H-imidazo[1,2-alpha]purine-7-butanoic acid, 4,9-dihydro- alpha-[(methoxycarbonyl)amino]- 4,6-dimethyl-9-oxo- 3-beta-D-ribofuranosyl methyl ester, a modified nucleoside found in some tRNA molecules.","definition_xrefs":["GOC:mah","RNAmods:037"],"gene_count":0,"genotype_count":0,"name":"obsolete wybutosine metabolic process (obsolete GO:0031590)","synonyms":[{"name":"wybutosine metabolism","type":"exact"},{"name":"yW metabolic process","type":"exact"},{"name":"yW metabolism","type":"exact"}],"termid":"GO:0031590"}


id: PBO:0005399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH-dependent FMN reductase (predicted)","termid":"PBO:0005399"}


id: SO:0002067
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A deletion of the HERV mobile element with respect to a reference.","definition_xrefs":["NCBI:th"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"Endogenous_Retrovirus_LTR_retrotransposon","termid":"SO:0002268"},{"relation_name":"is_a","term_name":"mobile_element_deletion","termid":"SO:0002066"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HERV_deletion","synonyms":[{"name":"HERV deletion","type":"exact"}],"termid":"SO:0002067"}


id: PBO:0087980
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA(m(1)G37)methyltransferase; methylates a tRNA base adjacent to the anticodon that has a role in prevention of frameshifting; localized to both cytoplasm and mitochondria, and modifies both cytoplasmic and mitochondrial tRNAs; mutations in human ortholog TRMT5 are associated with skeletal muscle respiratory chain deficiencies, and trm5 mutations analogous to disease mutations decrease respiration","termid":"PBO:0087980"}


id: PBO:0063417
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDE2A antisense RNA 2","termid":"PBO:0063417"}


id: PBO:0070857
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13 pseudogene 10","termid":"PBO:0070857"}


id: RO:0002091
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"temporally_related_to","termid":"RO:0002222"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"starts_during","termid":"RO:0002091"}


id: GO:0038198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with auxin and transmitting the signal in the cell to initiate a change in cell activity. Auxin is a plant hormone (phytohormone).","definition_xrefs":["PMID:15917797","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"auxin receptor activity","termid":"GO:0038198"}


id: PBO:0000172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3 Rad8","termid":"PBO:0000172"}


id: GO:0006693
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving prostaglandins, any of a group of biologically active metabolites which contain a cyclopentane ring due to the formation of a bond between two carbons of a fatty acid. They have a wide range of biological activities.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prostanoid metabolic process","termid":"GO:0006692"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"prostaglandin metabolic process","synonyms":[{"name":"prostaglandin metabolism","type":"exact"}],"termid":"GO:0006693"}


id: MONDO:0958322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder, X-linked, syndromic 37","secondary_identifiers":["UMLS:C5935567","MEDGEN:1854940","OMIM:301118"],"termid":"MONDO:0958322","xrefs":{"Monarch":{"xref_id":"0958322"}}}


id: GO:0043533
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to inositol 1,3,4,5 tetrakisphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"alcohol binding","termid":"GO:0043178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"inositol 1,3,4,5 tetrakisphosphate binding","synonyms":[{"name":"IP4 binding","type":"exact"},{"name":"InsP4 binding","type":"exact"}],"termid":"GO:0043533"}


id: FYPO:0003558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of any RNA transcribed from repeat elements, such as LTRs, retrotransposons, or wtf elements, measured in a cell is higher than normal.","definition_xrefs":["PMID:24957674","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level during vegetative growth","termid":"FYPO:0000825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0006551","FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"increased repeat element RNA level","synonyms":[{"name":"increased repeat element RNA accumulation","type":"related"},{"name":"increased repeat element RNA level during mitotic cell cycle","type":"related"},{"name":"increased repeat element RNA level during vegetative growth","type":"exact"},{"name":"increased repeat element transcript level","type":"exact"}],"termid":"FYPO:0003558"}


id: GO:0010328
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of auxin, from one side of a membrane to the other, into a cell.","definition_xrefs":["PMID:16839804"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxin transmembrane transporter activity","termid":"GO:0080161"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"auxin influx transmembrane transporter activity","synonyms":[{"name":"auxin influx facilitator","type":"related"}],"termid":"GO:0010328"}


id: GO:1905784
data:
  {"annotated_genes":["SJAG_03048","SJAG_00071"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[104377],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905785"},{"annotations":[90952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anaphase-promoting complex-dependent catabolic process.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:10921876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of proteasomal ubiquitin-dependent protein catabolic process","termid":"GO:0032434"},{"relation_name":"regulates","term_name":"anaphase-promoting complex-dependent catabolic process","termid":"GO:0031145"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_03048":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0030163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"regulation of anaphase-promoting complex-dependent catabolic process","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-176408"],"termid":"GO:1905784","terms_by_termid":{"GO:1905785":null,"GO:1905786":null}}


id: FYPO:0001155
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which the changes that take place in growth medium, due to metabolism, secretion, etc. by a cell or population of cells, differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"altered effect on growth medium","synonyms":[{"name":"abnormal effect on growth medium","type":"exact"}],"termid":"FYPO:0001155"}


id: PATO:0000301
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000301 absolute speed value (obsolete PATO:0000301)","termid":"PATO:0000301"}


id: PBO:0039978
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARL5A pseudogene 1","termid":"PBO:0039978"}


id: PBO:0060814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nebulette","termid":"PBO:0060814"}


id: MONDO:0001523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"eye disorder","termid":"MONDO:0005328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"luxation of globe","secondary_identifiers":["SCTID:20842008","MEDGEN:509664","DOID:1241","UMLS:C0154806","ICD10CM:H44.82","ICD9:360.81"],"synonyms":[{"name":"luxation of eye","type":"exact"}],"termid":"MONDO:0001523","xrefs":{"Monarch":{"xref_id":"0001523"}}}


id: MONDO:0014563
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"mitochondrial disease","termid":"MONDO:0044970"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency","secondary_identifiers":["OMIM:616277","GARD:13019","DOID:0070540","UMLS:C4225391","MEDGEN:902729","Orphanet:653880"],"synonyms":[{"name":"ECHS1D","type":"related"},{"name":"mitochondrial short-chain ENOYL-CoA hydratase 1 deficiency","type":"related"},{"name":"mitochondrial short-chain Enoyl-Coa hydratase 1 deficiency","type":"exact"},{"name":"short-chain enoyl-CoA hydratase deficiency","type":"related"}],"termid":"MONDO:0014563","xrefs":{"Monarch":{"xref_id":"0014563"}}}


id: PBO:0044789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin alpha 1B","termid":"PBO:0044789"}


id: PBO:0080290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 54 pseudogene","termid":"PBO:0080290"}


id: PR:O74759
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- nto1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74759"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mst2 complex subunit nto1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.04c","synonyms":[{"name":"Spom972h-nto1","type":"exact"}],"termid":"PR:O74759"}


id: PBO:0067612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 784, pseudogene","termid":"PBO:0067612"}


id: GO:0061192
data:
  {"annotated_genes":["SJAG_03072"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103476],"is_not":false,"summary":null,"term":"GO:0061192"}]},"cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the fusion of two vacuole membranes to form a single vacuole.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of organelle organization","termid":"GO:0010639"},{"relation_name":"is_a","term_name":"regulation of vacuole fusion, non-autophagic","termid":"GO:0032889"},{"relation_name":"negatively_regulates","term_name":"vacuole fusion, non-autophagic","termid":"GO:0042144"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03072":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of vacuole fusion, non-autophagic","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0061192","terms_by_termid":{"GO:0061192":null}}


id: PBO:0049579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3.3 histone B","termid":"PBO:0049579"}


id: MONDO:0021339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that involves the hard palate.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hard palate cancer","termid":"MONDO:0004719"},{"relation_name":"is_a","term_name":"oral cavity carcinoma","termid":"MONDO:0044925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"carcinoma of hard palate","secondary_identifiers":["MEDGEN:138019","SCTID:254434008","UMLS:C0345550","NCIT:C8394"],"synonyms":[{"name":"carcinoma of hard palate","type":"exact"},{"name":"carcinoma of the hard palate","type":"exact"},{"name":"hard palate carcinoma","type":"exact"}],"termid":"MONDO:0021339","xrefs":{"Monarch":{"xref_id":"0021339"}}}


id: PBO:0047197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 215 member B","termid":"PBO:0047197"}


id: GO:0019653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of purine nucleobases, yielding energy in the form of ATP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"purine nucleobase catabolic process","termid":"GO:0006145"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0006091","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"anaerobic purine nucleobase catabolic process","synonyms":[{"name":"anaerobic purine base catabolic process","type":"exact"},{"name":"anaerobic purine base catabolism","type":"exact"},{"name":"anaerobic purine catabolic process","type":"related"},{"name":"purine base fermentation","type":"exact"},{"name":"purine fermentation","type":"related"}],"termid":"GO:0019653"}


id: GO:0060691
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process, independent of morphogenetic (shape) change, that is required for an epithelial cell of the salivary gland to attain its fully functional state.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell maturation","termid":"GO:0002070"},{"relation_name":"part_of","term_name":"epithelial cell differentiation involved in salivary gland development","termid":"GO:0060690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell maturation involved in salivary gland development","termid":"GO:0060691"}


id: PBO:0057698
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1286","termid":"PBO:0057698"}


id: FYPO:0005458
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of glycerol measured in a cell during a cellular response to non-ionic osmotic stress is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased cellular glycerol level during cellular response to osmotic stress","termid":"FYPO:0005457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"decreased cellular glycerol level during cellular response to non-ionic osmotic stress","synonyms":[{"name":"decreased cellular glycerol level during cellular response to non-ionic osmotic stress during mitotic cell cycle","type":"related"},{"name":"decreased cellular glycerol level during cellular response to non-ionic osmotic stress during vegetative growth","type":"exact"},{"name":"decreased cellular glycerol level during cellular response to sorbitol","type":"related"},{"name":"decreased glycerol accumulation during cellular response to non-ionic osmotic stress","type":"related"},{"name":"reduced cellular glycerol level during cellular response to non-ionic osmotic stress","type":"exact"}],"termid":"FYPO:0005458"}


id: GO:0035971
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The removal of phosphoric residues from peptidyl-O-phospho-L-histidine to form peptidyl-histidine.","definition_xrefs":["GOC:BHF","PMID:12383260","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein dephosphorylation","termid":"GO:0006470"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-histidine dephosphorylation","termid":"GO:0035971"}


id: FYPO:0006988
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the dimethylation of lysine at position 9 of histone H3 occurs to a greater extent than normal at transposable elements.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0002274","FYPO:0002494"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at transposable element during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at transposable element during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 dimethylation at transposon during vegetative growth","type":"exact"},{"name":"increased histone H3K9 dimethylation at transposable element during vegetative growth","type":"exact"},{"name":"increased histone H3K9me2 at transposable element during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at transposable element during vegetative growth","type":"exact"}],"termid":"FYPO:0006988"}


id: PBO:0045508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"destrin, actin depolymerizing factor","termid":"PBO:0045508"}


id: PBO:0109093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPO11 initiator of meiotic double strand breaks","termid":"PBO:0109093"}


id: PBO:0005801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex TPR repeat subunit Ski3 (predicted)","termid":"PBO:0005801"}


id: MONDO:0971033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A thyroid gland carcinoma composed of groups of carcinoma cells with thymic epithelial differentiation.","definition_xrefs":["DOID:0081457"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thyroid gland carcinoma","termid":"MONDO:0015075"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"intrathyroid thymic carcinoma","secondary_identifiers":["UMLS:C1704613","MEDGEN:316474"],"termid":"MONDO:0971033","xrefs":{"Monarch":{"xref_id":"0971033"}}}


id: PBO:0068551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U2 small nuclear 2, pseudogene","termid":"PBO:0068551"}


id: PBO:0017456
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inheres_in_part_of","termid":"PBO:0017456"}


id: PBO:0066199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA binding motif protein 17","termid":"PBO:0066199"}


id: MOD:00845
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes one or more (18)O atoms for (16)O atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"(18)O labeled residue","termid":"MOD:00844"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"(18)O substituted residue","termid":"MOD:00845"}


id: PBO:0064243
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase D2","termid":"PBO:0064243"}


id: GO:0007428
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of primary branches in the open tracheal system. These form from small groups of cells that migrate out at specific positions, organizing into tubes as they migrate. An example of this is found in Drosophila melanogaster.","definition_xrefs":["GOC:mtg_sensu","PMID:29844090"],"direct_ancestors":[{"relation_name":"is_a","term_name":"branching involved in open tracheal system development","termid":"GO:0060446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"primary branching, open tracheal system","synonyms":[{"name":"primary tracheal branching","type":"exact"}],"termid":"GO:0007428"}


id: PBO:0070070
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 27, pseudogene","termid":"PBO:0070070"}


id: GO:0090725
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The non-central region or periphery of the migrating motile tip of a growing nerve cell axon or dendrite.","definition_xrefs":["GOC:sl","PMID:16260607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"growth cone","termid":"GO:0030426"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"peripheral region of growth cone","termid":"GO:0090725"}


id: PBO:0072959
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sec1 family domain containing 1","termid":"PBO:0072959"}


id: PBO:0030416
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_spindle_pole_body_duplication","termid":"PBO:0030416"}


id: MONDO:0015818
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggressive primary cutaneous B-cell lymphoma (obsolete MONDO:0015818)","secondary_identifiers":["Orphanet:178554"],"termid":"MONDO:0015818","xrefs":{"Monarch":{"xref_id":"0015818"}}}


id: PBO:0120262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GABRA3 antisense RNA 1","termid":"PBO:0120262"}


id: GO:0007097
data:
  {"annotated_genes":["SJAG_02509","SJAG_00140","SJAG_04143","SJAG_01863","SJAG_00368","SJAG_04387","SJAG_04003","SJAG_01662","SJAG_03835","SJAG_04597","SJAG_00113","SJAG_00397","SJAG_02737","SJAG_03673","SJAG_02651","SJAG_03264","SJAG_03073","SJAG_05185","SJAG_00594","SJAG_01370","SJAG_04001","SJAG_02045","SJAG_02561","SJAG_02431","SJAG_01613","SJAG_02286"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[106566,106897,114827],"is_not":false,"summary":null,"term":"GO:0007097"},{"annotations":[97221,93001,113457,119008,104983,93394,102748,105274,89764,116005,99588,113106,93858],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030989"},{"annotations":[108622,113280,103456],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032118"},{"annotations":[116007,119012,103467,72737,109465,76976,111655],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098863"},{"annotations":[99663,101246],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090561"},{"annotations":[101247,78280,89768,93396,99590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000743"},{"annotations":[96424],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902854"}]},"cv_name":"biological_process","definition":"The directed movement of the nucleus to a specific location within a cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular transport","termid":"GO:0046907"},{"relation_name":"is_a","term_name":"nucleus localization","termid":"GO:0051647"},{"relation_name":"is_a","term_name":"establishment of organelle localization","termid":"GO:0051656"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00368":null,"SJAG_00397":null,"SJAG_00594":null,"SJAG_01370":null,"SJAG_01613":null,"SJAG_01662":null,"SJAG_01863":null,"SJAG_02045":null,"SJAG_02286":null,"SJAG_02431":null,"SJAG_02509":null,"SJAG_02561":null,"SJAG_02651":null,"SJAG_02737":null,"SJAG_03073":null,"SJAG_03264":null,"SJAG_03673":null,"SJAG_03835":null,"SJAG_04001":null,"SJAG_04003":null,"SJAG_04143":null,"SJAG_04387":null,"SJAG_04597":null,"SJAG_05185":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"nuclear migration","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0040023"],"synonyms":[{"name":"establishment of cell nucleus localization","type":"related"},{"name":"establishment of localization of nucleus","type":"related"},{"name":"establishment of nucleus localisation","type":"related"},{"name":"establishment of nucleus localization","type":"related"},{"name":"establishment of position of nucleus","type":"exact"},{"name":"nuclear movement","type":"exact"},{"name":"nuclear positioning","type":"exact"},{"name":"nucleus migration","type":"exact"},{"name":"nucleus positioning","type":"exact"},{"name":"positioning of nucleus","type":"exact"}],"termid":"GO:0007097","terms_by_termid":{"GO:0000743":null,"GO:0007097":null,"GO:0030989":null,"GO:0032118":null,"GO:0090561":null,"GO:0098863":null,"GO:1902854":null}}


id: PBO:0040449
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase phospholipid transporting 10B (putative)","termid":"PBO:0040449"}


id: GO:0061900
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A change in morphology and behavior of a glial cell resulting from exposure to a cytokine, chemokine, cellular ligand, or soluble factor.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:18723082"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell activation","termid":"GO:0001775"},{"relation_name":"part_of","term_name":"neuroinflammatory response","termid":"GO:0150076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glial cell activation","termid":"GO:0061900"}


id: MONDO:0000941
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A neurodegenerative disease that involves the eyelid.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"eyelid disorder","termid":"MONDO:0003382"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005559"],"is_obsolete":false,"name":"eyelid degenerative disorder","secondary_identifiers":["ICD9:374.50","MEDGEN:509851","UMLS:C0155209","DOID:10120","SCTID:1112003"],"synonyms":[{"name":"eyelid neurodegenerative disease","type":"exact"},{"name":"neurodegenerative disease of eyelid","type":"exact"}],"termid":"MONDO:0000941","xrefs":{"Monarch":{"xref_id":"0000941"}}}


id: PBO:0052731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 23","termid":"PBO:0052731"}


id: PBO:0044968
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydrogenase/reductase X-linked","termid":"PBO:0044968"}


id: PBO:0001591
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone demethylase Jmj1 (predicted)","termid":"PBO:0001591"}


id: PBO:0077431
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMEM167A pseudogene 2","termid":"PBO:0077431"}


id: MONDO:0006584
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Jaundice that appears during the neonatal period. In the majority of cases, it appears in the first week of life and is classified as physiologic due to accelerated destruction of erythrocytes and liver immaturity. In a minority of cases it is classified as non-physiologic, appearing in the first twenty four hours after birth, and is associated with underlying diseases including hemolytic disorders, polycythemia, and cephalohematoma.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete neonatal jaundice (obsolete MONDO:0006584)","secondary_identifiers":["SCTID:387712008","ICD9:774.5","MESH:D007567","DOID:2383","ICD9:774.6"],"synonyms":[{"name":"neonatal hyperbilirubinemia","type":"exact"},{"name":"neonatal icterus","type":"exact"}],"termid":"MONDO:0006584","xrefs":{"Monarch":{"xref_id":"0006584"}}}


id: MONDO:0022859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital anatomic anomaly in which the heart has only two chambers.","definition_xrefs":["NCIT:C124591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"cor biloculare","secondary_identifiers":["MEDGEN:56271","ICD9:745.7","UMLS:C0152238","SCTID:81990004"],"synonyms":[{"name":"Cor Biloculare","type":"exact"},{"name":"TWO-chambered heart","type":"exact"},{"name":"absence of atrial and ventricular septa","type":"related"},{"name":"cor biloculare","type":"exact"}],"termid":"MONDO:0022859","xrefs":{"Monarch":{"xref_id":"0022859"}}}


id: PBO:0040581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bile acid-CoA:amino acid N-acyltransferase","termid":"PBO:0040581"}


id: GO:0006990
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The activation of genes whose promoters contain a specific sequence elements such as the unfolded protein response element (UPRE; consensus CAGCGTG) or the ER stress-response element (ERSE; CCAAN(N)9CCACG), as a result of signaling via the unfolded protein response.","definition_xrefs":["GOC:tb","GOC:mah","GOC:txnOH","PMID:12042763","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of transcription from RNA polymerase II promoter involved in unfolded protein response (obsolete GO:0006990)","synonyms":[{"name":"positive regulation of transcription of target genes involved in unfolded protein response","type":"exact"},{"name":"unfolded protein response, activation of target gene transcription","type":"narrow"},{"name":"unfolded protein response, positive regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, stimulation of target gene transcription","type":"narrow"},{"name":"unfolded protein response, target gene transcriptional activation","type":"broad"},{"name":"unfolded protein response, up regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, up-regulation of target gene transcription","type":"exact"},{"name":"unfolded protein response, upregulation of target gene transcription","type":"exact"}],"termid":"GO:0006990"}


id: MONDO:0015322
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Pierre Robin syndrome associated with bone disease (obsolete MONDO:0015322)","termid":"MONDO:0015322","xrefs":{"Monarch":{"xref_id":"0015322"}}}


id: GO:1902284
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any neuron projection extension that is involved in neuron projection guidance.","definition_xrefs":["PMID:22790009","GOC:TermGenie","GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection extension","termid":"GO:1990138"},{"relation_name":"part_of","term_name":"neuron projection guidance","termid":"GO:0097485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"neuron projection extension involved in neuron projection guidance","synonyms":[{"name":"neurite extension involved in neurite guidance","type":"narrow"},{"name":"neurite extension involved in neuron process guidance","type":"narrow"},{"name":"neurite extension involved in neuron projection guidance","type":"narrow"},{"name":"neurite extension involved in neuron protrusion guidance","type":"narrow"},{"name":"neurite extension involved in neuronal cell projection guidance","type":"narrow"},{"name":"neuron process extension involved in neurite guidance","type":"narrow"},{"name":"neuron process extension involved in neuron process guidance","type":"exact"},{"name":"neuron process extension involved in neuron projection guidance","type":"exact"},{"name":"neuron process extension involved in neuron protrusion guidance","type":"exact"},{"name":"neuron process extension involved in neuronal cell projection guidance","type":"exact"},{"name":"neuron projection extension involved in neurite guidance","type":"narrow"},{"name":"neuron projection extension involved in neuron process guidance","type":"exact"},{"name":"neuron projection extension involved in neuron protrusion guidance","type":"exact"},{"name":"neuron projection extension involved in neuronal cell projection guidance","type":"exact"},{"name":"neuron protrusion extension involved in neurite guidance","type":"narrow"},{"name":"neuron protrusion extension involved in neuron process guidance","type":"exact"},{"name":"neuron protrusion extension involved in neuron projection guidance","type":"exact"},{"name":"neuron protrusion extension involved in neuron protrusion guidance","type":"exact"},{"name":"neuron protrusion extension involved in neuronal cell projection guidance","type":"exact"},{"name":"neuronal cell projection extension involved in neurite guidance","type":"narrow"},{"name":"neuronal cell projection extension involved in neuron process guidance","type":"exact"},{"name":"neuronal cell projection extension involved in neuron projection guidance","type":"exact"},{"name":"neuronal cell projection extension involved in neuron protrusion guidance","type":"exact"},{"name":"neuronal cell projection extension involved in neuronal cell projection guidance","type":"exact"}],"termid":"GO:1902284"}


id: GO:0060637
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that increases the rate, frequency, or extent of lactation as a result of the secretion of a signal from the mammary fat and its reception by a mammary epithelial cell.","definition_xrefs":["GOC:dph","PMID:12558599"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchymal-epithelial cell signaling","termid":"GO:0060638"},{"relation_name":"is_a","term_name":"positive regulation of lactation","termid":"GO:1903489"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of lactation by mesenchymal-epithelial cell signaling","synonyms":[{"name":"positive regulation of lactation by mesenchymal-epithelial cell signalling","type":"exact"}],"termid":"GO:0060637"}


id: GO:0042660
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or enables a cell to adopt a specific fate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell fate commitment","termid":"GO:0010455"},{"relation_name":"is_a","term_name":"regulation of cell fate specification","termid":"GO:0042659"},{"relation_name":"positively_regulates","term_name":"cell fate specification","termid":"GO:0001708"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell fate specification","synonyms":[{"name":"activation of cell fate specification","type":"narrow"},{"name":"stimulation of cell fate specification","type":"narrow"},{"name":"up regulation of cell fate specification","type":"exact"},{"name":"up-regulation of cell fate specification","type":"exact"},{"name":"upregulation of cell fate specification","type":"exact"}],"termid":"GO:0042660"}


id: PBO:0000748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mannosyltransferase complex subunit Alg1 (predicted)","termid":"PBO:0000748"}


id: GO:0005826
data:
  {"annotated_genes":["SJAG_02831","SJAG_03596","SJAG_02864","SJAG_02838","SJAG_03025","SJAG_03564","SJAG_02266","SJAG_03625","SJAG_00185","SJAG_04597","SJAG_02278","SJAG_01143","SJAG_04509","SJAG_03887","SJAG_00279","SJAG_00750","SJAG_03379","SJAG_00938","SJAG_00228","SJAG_02431","SJAG_00663","SJAG_02737","SJAG_04498","SJAG_01114","SJAG_03145","SJAG_00229","SJAG_00082","SJAG_01943","SJAG_04887","SJAG_03703","SJAG_01889","SJAG_00268","SJAG_00845","SJAG_03704","SJAG_03374","SJAG_04621","SJAG_05285","SJAG_03581","SJAG_03681","SJAG_04375","SJAG_00807","SJAG_01665","SJAG_04703","SJAG_02320","SJAG_00677","SJAG_04461","SJAG_02169","SJAG_03088","SJAG_03631","SJAG_01787","SJAG_01277","SJAG_04077","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[121255,121300,121301,121302,121303,121304,121547],"is_not":false,"summary":null,"term":"GO:0005826"},{"annotations":[100294,91823,78266,94547,119704,121448,120916,121451,121455,95833,107378,117874,96588,121453,117958,92726,76896,108922,112809,103280,121645,91333,121446,89894,103287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110085"},{"annotations":[111098,102718,102553,107171,119936],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120106"},{"annotations":[98337,108229,90279,96415,105707,119937,97855,92774,99205,102952,111099,112849,114359,115414,91995,96951,119954],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120105"},{"annotations":[100036,102981,102134,111100,99657,119096,81705,94331,80163,105934,110168,119002,59065,58533,109072],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120104"}]},"cv_name":"cellular_component","definition":"A cytoskeletal structure composed of actin filaments and myosin that forms beneath the plasma membrane of many cells, including animal cells and yeast cells, in a plane perpendicular to the axis of the spindle, i.e. the cell division plane. In animal cells, the contractile ring is located at the cleavage furrow. In budding fungal cells, e.g. mitotic S. cerevisiae cells, the contractile ring forms at the mother-bud neck before mitosis.","definition_xrefs":["GOC:vw","ISBN:0805319409","GOC:expert_jrp","PMID:28914606","GOC:sgd_curators","ISBN:0815316194"],"direct_ancestors":[{"relation_name":"is_a","term_name":"contractile ring","termid":"GO:0070938"},{"relation_name":"part_of","term_name":"cortical actin cytoskeleton","termid":"GO:0030864"},{"relation_name":"part_of","term_name":"cell division site","termid":"GO:0032153"}],"gene_count":53,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00185":null,"SJAG_00228":null,"SJAG_00229":null,"SJAG_00268":null,"SJAG_00279":null,"SJAG_00663":null,"SJAG_00677":null,"SJAG_00750":null,"SJAG_00807":null,"SJAG_00845":null,"SJAG_00938":null,"SJAG_01114":null,"SJAG_01143":null,"SJAG_01277":null,"SJAG_01665":null,"SJAG_01787":null,"SJAG_01889":null,"SJAG_01943":null,"SJAG_02169":null,"SJAG_02266":null,"SJAG_02278":null,"SJAG_02320":null,"SJAG_02392":null,"SJAG_02431":null,"SJAG_02737":null,"SJAG_02831":null,"SJAG_02838":null,"SJAG_02864":null,"SJAG_03025":null,"SJAG_03088":null,"SJAG_03145":null,"SJAG_03374":null,"SJAG_03379":null,"SJAG_03564":null,"SJAG_03581":null,"SJAG_03596":null,"SJAG_03625":null,"SJAG_03631":null,"SJAG_03681":null,"SJAG_03703":null,"SJAG_03704":null,"SJAG_03887":null,"SJAG_04077":null,"SJAG_04375":null,"SJAG_04461":null,"SJAG_04498":null,"SJAG_04509":null,"SJAG_04597":null,"SJAG_04621":null,"SJAG_04703":null,"SJAG_04887":null,"SJAG_05285":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0015629"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0070938"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005575","GO:0005938","GO:0015629","GO:0005737","GO:0070938"],"is_obsolete":false,"name":"actomyosin contractile ring","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:27734801":null,"PMID:28655757":null,"PMID:36148799":null},"secondary_identifiers":["GO:0030480"],"synonyms":[{"name":"CAR","type":"exact"},{"name":"actomyosin ring","type":"related"},{"name":"constriction ring","type":"related"},{"name":"contractile actomyosin ring","type":"exact"},{"name":"cytokinetic ring","type":"related"}],"termid":"GO:0005826","terms_by_termid":{"GO:0005826":null,"GO:0110085":null,"GO:0120104":null,"GO:0120105":null,"GO:0120106":null}}


id: PBO:0062816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxysterol binding protein like 10","termid":"PBO:0062816"}


id: PBO:0042499
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CDH18 antisense RNA 1","termid":"PBO:0042499"}


id: PBO:0059302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L49 pseudogene 1","termid":"PBO:0059302"}


id: PBO:0055932
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing 38","termid":"PBO:0055932"}


id: PBO:0120252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABHD16B antisense RNA 1","termid":"PBO:0120252"}


id: PBO:0053940
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1241","termid":"PBO:0053940"}


id: SO:0002169
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that falls in the polypyrimidine tract at 3' end of intron between 17 and 3 bases from the end (acceptor -3 to acceptor -17).","direct_ancestors":[{"relation_name":"is_a","term_name":"splicing_variant","termid":"SO:0001568"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"splice_polypyrimidine_tract_variant","synonyms":[{"name":"splice polypyrimidine tract variant","type":"exact"}],"termid":"SO:0002169"}


id: FYPO:0004064
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which transcription of RNA from one or more DNA templates is abnormal.","definition_xrefs":["PomBase:mah","GO:0006351"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transcription phenotype during vegetative growth","termid":"FYPO:0000290"},{"relation_name":"is_a","term_name":"nucleic acid metabolism phenotype during vegetative growth","termid":"FYPO:0001347"},{"relation_name":"is_a","term_name":"abnormal metabolic process during vegetative growth","termid":"FYPO:0001363"},{"relation_name":"is_a","term_name":"abnormal transcription","termid":"FYPO:0005502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001320","FYPO:0001985","FYPO:0000294","FYPO:0006551"],"is_obsolete":false,"name":"abnormal transcription during vegetative growth","synonyms":[{"name":"abnormal DNA-dependent transcription during vegetative growth","type":"exact"},{"name":"abnormal transcription during mitotic cell cycle","type":"related"},{"name":"abnormal transcription, DNA-templated, during vegetative growth","type":"exact"}],"termid":"FYPO:0004064"}


id: MONDO:0006727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heart failure caused by abnormal myocardial relaxation during diastole leading to defective cardiac filling.","definition_xrefs":["MESH:D054144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congestive heart failure","termid":"MONDO:0005009"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"diastolic heart failure","secondary_identifiers":["MEDGEN:210051","ICD9:428.30","UMLS:C1135196","SCTID:418304008","DOID:9775","EFO:1000899","ICD9:428.3","MedDRA:10069211"],"termid":"MONDO:0006727","xrefs":{"Monarch":{"xref_id":"0006727"}}}


id: GO:0005200
data:
  {"annotated_genes":["SJAG_04003","SJAG_02509","SJAG_04387","SJAG_01384","SJAG_03145"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[58611,61816,64346,79743,111110],"is_not":false,"summary":null,"term":"GO:0005200"}]},"cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a cytoskeletal structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01384":null,"SJAG_02509":null,"SJAG_03145":null,"SJAG_04003":null,"SJAG_04387":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of cytoskeleton","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0005200","terms_by_termid":{"GO:0005200":null}}


id: PBO:0059830
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial transcription termination factor 4","termid":"PBO:0059830"}


id: FYPO:0006592
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype in which the mitotic spindle forms with microtubules emanating from only one pole, nucleated from the old spindle pole body.","definition_xrefs":["PMID:19942852","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monopolar mitotic spindle","termid":"FYPO:0000276"},{"relation_name":"output_of","term_name":"abolished mitotic spindle microtubule nucleation from spindle pole body","termid":"FYPO:0007422"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0000337"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000120","FYPO:0001320","FYPO:0000002","FYPO:0000054","FYPO:0002399","FYPO:0001985","FYPO:0000337","FYPO:0000641","FYPO:0000631"],"is_obsolete":false,"name":"monopolar mitotic spindle nucleated from old spindle pole body","synonyms":[{"name":"monopolar mitotic spindle nucleated from old SPB","type":"exact"},{"name":"monopolar mitotic spindle nucleated from old spindle pole body during mitotic cell cycle","type":"exact"},{"name":"monopolar mitotic spindle nucleated from old spindle pole body during vegetative growth","type":"exact"}],"termid":"FYPO:0006592"}


id: PBO:0052131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium voltage-gated channel modifier subfamily G member 3","termid":"PBO:0052131"}


id: PBO:0052612
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KRAB box domain containing 4","termid":"PBO:0052612"}


id: GO:0035985
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A transcriptionally-silent heterochromatin structure present in senescent cells. Contains the condensed chromatin of one chromosome and is enriched for histone modifications. Thought to repress expression of proliferation-promoting genes.","definition_xrefs":["GOC:yaf","PMID:21248468","PMID:15621527"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heterochromatin","termid":"GO:0000792"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005694"],"is_obsolete":false,"name":"senescence-associated heterochromatin focus","synonyms":[{"name":"SAHF","type":"exact"},{"name":"senescence-associated heterochromatin foci","type":"exact"}],"termid":"GO:0035985"}


id: MONDO:0005362
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent or recurrent inability to achieve or to maintain an erection during sexual activity.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"penile disorder","termid":"MONDO:0002036"},{"relation_name":"is_a","term_name":"physiological sexual disorder","termid":"MONDO:0002134"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"erectile dysfunction","secondary_identifiers":["UMLS:C0242350","DOID:1875","EFO:0004234","HP:0000802","MEDGEN:66879","MESH:D007172","ICD10CM:F52.21","NCIT:C34801","SCTID:397803000"],"synonyms":[{"name":"dysfunction, erectile","type":"related"},{"name":"erectile dysfunction","type":"exact"},{"name":"erectile dysfunction (disease)","type":"exact"},{"name":"impotence","type":"related"},{"name":"impotence, male","type":"related"},{"name":"impotence, male sexual","type":"related"},{"name":"male erectile Disorder","type":"exact"},{"name":"male impotence","type":"related"},{"name":"male sexual impotence","type":"related"},{"name":"sexual impotence","type":"exact"},{"name":"sexual impotence (finding)","type":"exact"},{"name":"sexual impotence, Male","type":"related"}],"termid":"MONDO:0005362","xrefs":{"Monarch":{"xref_id":"0005362"}}}


id: PBO:0087828
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TFIIF (Transcription Factor II) middle subunit; involved in both transcription initiation and elongation of RNA polymerase II; homologous to human RAP30","termid":"PBO:0087828"}


id: PR:Q7Z991
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- caf16 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q7Z991"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized ABC transporter ATP-binding protein C20G4.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC20G4.01","synonyms":[{"name":"Spom972h-caf16","type":"exact"}],"termid":"PR:Q7Z991"}


id: PBO:0067527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 671, pseudogene","termid":"PBO:0067527"}


id: GO:0015331
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the stereospecific transfer of asparagine or glutamine across a biological membrane.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete asparagine/glutamine permease activity (obsolete GO:0015331)","synonyms":[{"name":"asparagine/glutamine permease activity","type":"exact"}],"termid":"GO:0015331"}


id: PBO:0073384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SET domain containing 1A, histone lysine methyltransferase","termid":"PBO:0073384"}


id: PBO:0051771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inositol-pentakisphosphate 2-kinase","termid":"PBO:0051771"}


id: GO:2000026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of multicellular organismal development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"is_a","term_name":"regulation of multicellular organismal process","termid":"GO:0051239"},{"relation_name":"regulates","term_name":"multicellular organism development","termid":"GO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of multicellular organismal development","termid":"GO:2000026"}


id: GO:0071316
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nicotine stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to nicotine","termid":"GO:0035094"},{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to nicotine","termid":"GO:0071316"}


id: SO:0000482
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Genomic DNA of immunoglobulin/T-cell receptor gene in germline configuration.","direct_ancestors":[{"relation_name":"is_a","term_name":"vertebrate_immune_system_gene_recombination_feature","termid":"SO:0000301"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebrate_immunoglobulin_T_cell_receptor_gene_cluster","synonyms":[{"name":"vertebrate immunoglobulin T cell receptor gene cluster","type":"exact"},{"name":"vertebrate_immunoglobulin/T-cell receptor gene cluster","type":"exact"}],"termid":"SO:0000482"}


id: PBO:0003310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk19","termid":"PBO:0003310"}


id: PBO:0004120
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-C3HC4 type zinc finger","termid":"PBO:0004120"}


id: PBO:0056615
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYST/Esa1-associated factor 6 pseudogene 1","termid":"PBO:0056615"}


id: PBO:0044482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 26 subfamily B member 1","termid":"PBO:0044482"}


id: FYPO:0008168
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the nuclear foci are absent.","direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"abolished nuclear foci","termid":"FYPO:0008168"}


id: GO:0016472
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A large protein complex that catalyzes the synthesis or hydrolysis of ATP by a rotational mechanism, coupled to the transport of sodium ions across a membrane. The complex comprises a membrane sector (F0 or V0) that carries out ion transport and a cytoplasmic compartment sector (F1 or V1) that catalyzes ATP synthesis or hydrolysis.","definition_xrefs":["GOC:mah","PMID:14656431"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"sodium ion-transporting two-sector ATPase complex","synonyms":[{"name":"sodium-transporting two-sector ATPase complex","type":"exact"}],"termid":"GO:0016472"}


id: PBO:0114077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7 transmembrane receptor family protein","termid":"PBO:0114077"}


id: GO:0009937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of gibberellic acid mediated signaling.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signal transduction","termid":"GO:0009966"},{"relation_name":"regulates","term_name":"gibberellic acid mediated signaling pathway","termid":"GO:0009740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of gibberellic acid mediated signaling pathway","synonyms":[{"name":"regulation of gibberellic acid mediated signalling","type":"exact"}],"termid":"GO:0009937"}


id: PATO:0001224
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001224 real number (obsolete PATO:0001224)","termid":"PATO:0001224"}


id: PBO:0070734
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10a pseudogene 4","termid":"PBO:0070734"}


id: PBO:0081537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 446","termid":"PBO:0081537"}


id: FYECO:0000216
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Cells were grown for up to 24 hours.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping growth timing","termid":"FYECO:0000122"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth <24 hrs","synonyms":[{"name":"growth <24 hours","type":"exact"},{"name":"overnight culture","type":"related"}],"termid":"FYECO:0000216"}


id: PBO:0004413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ras1-Scd pathway protein Ral2","termid":"PBO:0004413"}


id: PBO:0009818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eisosome protein Pil1","termid":"PBO:0009818"}


id: GO:0018170
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The formation of a C-terminal peptidyl-polyglutamic acid to form a peptidyl-N-L-glutamyl-poly-L-glutamic acid C-terminus.","definition_xrefs":["RESID:AA0261"],"gene_count":0,"genotype_count":0,"name":"obsolete C-terminal peptidyl-polyglutamic acid amidation (obsolete GO:0018170)","termid":"GO:0018170"}


id: PBO:0040975
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BNIP3 pseudogene 46","termid":"PBO:0040975"}


id: FYPO:0002945
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell when the cell is in G0 phase is higher than normal. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA level","termid":"FYPO:0001890"},{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0006551","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased RNA level during G0","synonyms":[{"name":"increased RNA accumulation during G0","type":"related"},{"name":"increased RNA level during cell quiescence","type":"exact"},{"name":"increased RNA level during quiescence","type":"exact"},{"name":"increased transcript level during G0","type":"exact"}],"termid":"FYPO:0002945"}


id: GO:0030437
data:
  {"annotated_genes":["SJAG_02241","SJAG_03090","SJAG_02169","SJAG_00993","SJAG_03688","SJAG_04853","SJAG_04140","SJAG_01483","SJAG_04238","SJAG_00974","SJAG_00663","SJAG_03746","SJAG_00405","SJAG_00971","SJAG_01321","SJAG_04615","SJAG_02320","SJAG_02712","SJAG_04859","SJAG_03557","SJAG_03587","SJAG_05309","SJAG_00821","SJAG_03013","SJAG_02529","SJAG_00826","SJAG_04922","SJAG_03915","SJAG_02248","SJAG_00114","SJAG_03057","SJAG_03483","SJAG_00486","SJAG_04271","SJAG_04184","SJAG_04236","SJAG_04781","SJAG_04483","SJAG_04470","SJAG_04010","SJAG_01531","SJAG_04901","SJAG_01769","SJAG_04080","SJAG_04275","SJAG_04868","SJAG_01662","SJAG_03250","SJAG_03536"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98531,98946,102747,107151,113565,114768],"is_not":false,"summary":null,"term":"GO:0030437"},{"annotations":[96475],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[93784,90219,90709,92255],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[119845,116140,106187,119853,111113],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070591"},{"annotations":[107003,74953,93511],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031321"},{"annotations":[107315,112162,121100,115988,100842,99600,97385,109420,120917,120616,103729,93300,101921,99563],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032120"},{"annotations":[99564,101850,104936,115989,101851,94301,106145,98880,108865,109751],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0031322"},{"annotations":[113253],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:0075297"},{"annotations":[104304],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0075296"},{"annotations":[92735],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903024"},{"annotations":[94197],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0034307"},{"annotations":[102140,108042,96516,118031,101852,101853],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0070583"}]},"cv_name":"biological_process","definition":"The process in which cells that are products of meiosis acquire the specialized features of ascospores. Ascospores are generally found in clusters of four or eight spores within a single mother cell, the ascus, and are characteristic of the ascomycete fungi (phylum Ascomycota).","definition_xrefs":["PMID:16339736","GOC:di","GOC:mcc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive process in single-celled organism","termid":"GO:0022413"},{"relation_name":"is_a","term_name":"sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043935"},{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":49,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_00405":null,"SJAG_00486":null,"SJAG_00663":null,"SJAG_00821":null,"SJAG_00826":null,"SJAG_00971":null,"SJAG_00974":null,"SJAG_00993":null,"SJAG_01321":null,"SJAG_01483":null,"SJAG_01531":null,"SJAG_01662":null,"SJAG_01769":null,"SJAG_02169":null,"SJAG_02241":null,"SJAG_02248":null,"SJAG_02320":null,"SJAG_02529":null,"SJAG_02712":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03090":null,"SJAG_03250":null,"SJAG_03483":null,"SJAG_03536":null,"SJAG_03557":null,"SJAG_03587":null,"SJAG_03688":null,"SJAG_03746":null,"SJAG_03915":null,"SJAG_04010":null,"SJAG_04080":null,"SJAG_04140":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04271":null,"SJAG_04275":null,"SJAG_04470":null,"SJAG_04483":null,"SJAG_04615":null,"SJAG_04781":null,"SJAG_04853":null,"SJAG_04859":null,"SJAG_04868":null,"SJAG_04901":null,"SJAG_04922":null,"SJAG_05309":null},"genotype_count":0,"in_subsets":["bp_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"ascospore formation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0007151"],"synonyms":[{"name":"ascospore biosynthesis","type":"exact"},{"name":"spore formation","type":"broad"},{"name":"sporulation","type":"broad"}],"termid":"GO:0030437","terms_by_termid":{"GO:0030437":null,"GO:0030476":null,"GO:0031321":null,"GO:0031322":null,"GO:0032120":null,"GO:0034307":null,"GO:0034412":null,"GO:0034413":null,"GO:0070583":null,"GO:0070591":null,"GO:0075296":null,"GO:0075297":null,"GO:1903024":null}}


id: GO:0045030
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with a nucleotide and transmitting the signal to a heterotrimeric G-protein complex to initiate a change in cell activity, activated by UTP.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"G protein-coupled pyrimidinergic nucleotide receptor activity","termid":"GO:0071553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"G protein-coupled UTP receptor activity","secondary_identifiers":["GO:0015065"],"synonyms":[{"name":"UTP-activated nucleotide receptor activity","type":"broad"},{"name":"purinoceptor type U","type":"broad"},{"name":"uridine nucleotide receptor activity","type":"broad"}],"termid":"GO:0045030"}


id: PBO:0027217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_cytosolic_large:small_ribosomal_subunit_ratio","termid":"PBO:0027217"}


id: MONDO:0013651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the MED23 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 18","secondary_identifiers":["DOID:0081190","OMIM:614249","UMLS:C3280265","GARD:22552","MEDGEN:481895"],"synonyms":[{"name":"MED23","type":"related"},{"name":"MED23 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"MRT18","type":"related"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in MED23","type":"exact"},{"name":"autosomal recessive nonsyndromic intellectual disability-18","type":"related"},{"name":"autosomal recessive nonsyndromic mental retardation-18","type":"related"},{"name":"intellectual developmental disorder, autosomal recessive 18, with or without epilepsy","type":"exact"},{"name":"intellectual disability, autosomal recessive 18","type":"exact"},{"name":"intellectual disability, autosomal recessive type 18","type":"exact"},{"name":"mental retardation, autosomal recessive 18","type":"related"},{"name":"mental retardation, autosomal recessive type 18","type":"exact"}],"termid":"MONDO:0013651","xrefs":{"Monarch":{"xref_id":"0013651"}}}


id: PBO:0069996
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1291, pseudogene","termid":"PBO:0069996"}


id: PR:000050516
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the ssp2 gene in Schizosaccharomyces pombe.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF1-like protein kinase ssp2 (Schizosaccharomyces pombe)","pombase_gene_id":"SPCC74.03c","termid":"PR:000050516"}


id: FYPO:0002816
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and in which the nucleus divides at least once to produce a multinucleate cell. The cell does not divide, and eventually dies.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable elongated multinucleate vegetative cell","termid":"FYPO:0001493"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division, with elongated germ tube","termid":"FYPO:0002379"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000631"},{"rel_name":"output_of","termid":"FYPO:0000032"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000631","FYPO:0005447","FYPO:0001320","FYPO:0000002","FYPO:0000004","FYPO:0001985","FYPO:0000032"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, multinucleate cell with elongated germ tube","synonyms":[{"name":"inviable germinated spore, without cell division, multinucleate cell with elongated germ tube","type":"exact"},{"name":"inviable multinucleate germinated spore with elongated germ tube","type":"exact"},{"name":"lethal after spore germination, without cell division, multinucleate cell with elongated germ tube","type":"exact"},{"name":"multinucleate after spore germination with elongated germ tube","type":"exact"}],"termid":"FYPO:0002816"}


id: GO:0045222
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of CD4, a CD marker that occurs on T-helper cells and is involved in MHC class II restricted interactions.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete CD4 biosynthetic process (obsolete GO:0045222)","synonyms":[{"name":"CD4 anabolism","type":"exact"},{"name":"CD4 biosynthesis","type":"exact"},{"name":"CD4 formation","type":"exact"},{"name":"CD4 synthesis","type":"exact"}],"termid":"GO:0045222"}


id: FYPO:0000385
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which macroautophagy is normal (i.e. indistinguishable from wild type). Macroautophagy is the major pathway by which cells digest parts of their own cytoplasm.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process","termid":"FYPO:0000627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal macroautophagy","synonyms":[{"name":"autophagy: normal","type":"broad"}],"termid":"FYPO:0000385"}


id: GO:0033131
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucokinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to a glucose molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucokinase activity (obsolete GO:0033131)","synonyms":[{"name":"glucokinase regulator","type":"narrow"}],"termid":"GO:0033131"}


id: PBO:0031866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell-surface heme aquisition heme protein Shu1","termid":"PBO:0031866"}


id: GO:0043404
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with corticotropin-releasing hormone and transmitting the signal to initiate a change in cell activity.","definition_xrefs":["GOC:signaling","PMID:11027914","ISBN:0838577016","PMID:15134857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"signaling receptor activity","termid":"GO:0038023"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"corticotropin-releasing hormone receptor activity","secondary_identifiers":["GO:0031636"],"synonyms":[{"name":"CRF receptor activity","type":"exact"},{"name":"CRH receptor activity","type":"exact"},{"name":"adrenocorticotropin-releasing hormone receptor activity","type":"exact"},{"name":"corticotropin-releasing factor receptor activity","type":"exact"}],"termid":"GO:0043404"}


id: PBO:0031115
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_phenotype","termid":"PBO:0031115"}


id: FYPO:0005400
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle in response to the presence of DNA double-strand breaks is abnormal.","definition_xrefs":["PMID:12628934","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal regulation of mitotic cell cycle","termid":"FYPO:0000148"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"abnormal mitotic cell cycle regulation during cellular response to DNA double-strand break","synonyms":[{"name":"abnormal cell cycle regulation during cellular response to DNA double-strand break","type":"exact"},{"name":"abnormal cell cycle regulation during cellular response to DNA double-strand break during mitotic cell cycle","type":"exact"},{"name":"abnormal mitotic cell cycle regulation during cellular response to DNA double-strand break during vegetative growth","type":"exact"},{"name":"abnormal mitotic cell cycle regulation in response to DNA double-strand break","type":"exact"}],"termid":"FYPO:0005400"}


id: PBO:0004039
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eIF2 alpha kinase Gcn2","termid":"PBO:0004039"}


id: PBO:0074807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13 pseudogene 2","termid":"PBO:0074807"}


id: GO:0009125
data:
  {"annotated_genes":["SJAG_01974","SJAG_01055"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77727,70710],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009159"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of a nucleoside monophosphate, a compound consisting of a nucleobase linked to a deoxyribose or ribose sugar esterified with phosphate on the sugar.","definition_xrefs":["GOC:go_curators","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleoside monophosphate metabolic process","termid":"GO:0009123"},{"relation_name":"is_a","term_name":"nucleoside phosphate catabolic process","termid":"GO:1901292"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01055":null,"SJAG_01974":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"nucleoside monophosphate catabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000117":null},"synonyms":[{"name":"nucleoside monophosphate breakdown","type":"exact"},{"name":"nucleoside monophosphate catabolism","type":"exact"},{"name":"nucleoside monophosphate degradation","type":"exact"}],"termid":"GO:0009125","terms_by_termid":{"GO:0009159":null}}


id: FYPO:0001820
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing lithium ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002058","FYPO:0002060","FYPO:0002057","FYPO:0000257","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on lithium","synonyms":[{"name":"normal cell population growth in presence of lithium ions","type":"exact"},{"name":"normal cell population growth on lithium","type":"exact"},{"name":"normal cell population growth on lithium ion","type":"exact"},{"name":"normal cellular response to lithium ion","type":"related"},{"name":"normal growth on lithium ion","type":"exact"},{"name":"normal vegetative cell population growth on lithium ion","type":"exact"}],"termid":"FYPO:0001820"}


id: GO:0110035
data:
  {"annotated_genes":["SJAG_04855"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[104297],"is_not":false,"summary":null,"term":"GO:0110035"}]},"cv_name":"molecular_function","definition":"The activity of binding selectively, and in a sequence-specific manner, a replication fork barrier found in rDNA spacers, and distorting the original structure of DNA, typically a straight helix, into a bend, or increasing the bend if the original structure was intrinsically bent due to its sequence.","definition_xrefs":["GOC:vw","PMID:27035982","GOC:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rDNA spacer replication fork barrier binding","termid":"GO:0043110"},{"relation_name":"is_a","term_name":"sequence-specific DNA binding, bending","termid":"GO:0044374"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04855":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"rDNA spacer replication fork barrier binding, bending","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0110035","terms_by_termid":{"GO:0110035":null}}


id: GO:0007135
data:
  {"annotated_genes":["SJAG_03090","SJAG_00678","SJAG_03989","SJAG_00207","SJAG_04271","SJAG_00486","SJAG_00646","SJAG_04508"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[107152,108866,109753],"is_not":false,"summary":null,"term":"GO:0007135"},{"annotations":[95841,89876],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[115284,113739,90011],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045144"}]},"cv_name":"biological_process","definition":"The second nuclear division of meiosis, in which the two chromatids in each chromosome are separated, resulting in four daughter nuclei from the two nuclei produced in meiosis II.","definition_xrefs":["GOC:dph","GOC:mah","ISBN:0198547684"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis II cell cycle process","termid":"GO:0061983"},{"relation_name":"is_a","term_name":"meiotic nuclear division","termid":"GO:0140013"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00207":null,"SJAG_00486":null,"SJAG_00646":null,"SJAG_00678":null,"SJAG_03090":null,"SJAG_03989":null,"SJAG_04271":null,"SJAG_04508":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0140013"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0140013","GO:0007049"],"is_obsolete":false,"name":"meiosis II","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Wikipedia:Meiosis#Meiosis_II"],"synonyms":[{"name":"meiosis II nuclear division","type":"exact"}],"termid":"GO:0007135","terms_by_termid":{"GO:0007135":null,"GO:0045144":null,"GO:0051456":null}}


id: PBO:0013776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S acidic ribosomal protein A1","termid":"PBO:0013776"}


id: PBO:0041583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 39","termid":"PBO:0041583"}


id: PBO:0024871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific multicopy membrane protein family 1","termid":"PBO:0024871"}


id: FYPO:0001352
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which any process of chromatin organization is abnormal in the vegetative growth phase of the life cycle. Chromatin organization results in the specification, formation or maintenance of the physical structure of eukaryotic chromatin.","definition_xrefs":["GO:0006325","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal cellular component organization during vegetative growth","termid":"FYPO:0001353"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0000641","FYPO:0001985"],"is_obsolete":false,"name":"abnormal chromatin organization during vegetative growth","synonyms":[{"name":"abnormal chromatin organisation during vegetative growth","type":"exact"},{"name":"abnormal chromatin organization during mitotic cell cycle","type":"related"}],"termid":"FYPO:0001352"}


id: PBO:0027086
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_mitotic_spindle_midzone_during_anaphase","termid":"PBO:0027086"}


id: PBO:0001947
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha glucosidase I Gls1 (predicted)","termid":"PBO:0001947"}


id: PBO:0038575
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abraxas 1, BRCA1 A complex subunit","termid":"PBO:0038575"}


id: MONDO:0014240
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any periventricular nodular heterotopia in which the cause of the disease is a mutation in the ERMARD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"periventricular nodular heterotopia","termid":"MONDO:0020341"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"periventricular nodular heterotopia 6","secondary_identifiers":["GARD:15983","MEDGEN:816202","UMLS:C3809872","OMIM:615544"],"synonyms":[{"name":"ERMARD periventricular nodular heterotopia","type":"exact"},{"name":"PVNH6","type":"related"},{"name":"periventricular nodular heterotopia 6","type":"exact"},{"name":"periventricular nodular heterotopia caused by mutation in ERMARD","type":"exact"},{"name":"periventricular nodular heterotopia type 6","type":"exact"}],"termid":"MONDO:0014240","xrefs":{"Monarch":{"xref_id":"0014240"}}}


id: GO:1901503
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ether.","definition_xrefs":["GOC:TermGenie","GOC:pr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ether biosynthetic process","synonyms":[{"name":"ether anabolism","type":"exact"},{"name":"ether biosynthesis","type":"exact"},{"name":"ether formation","type":"exact"},{"name":"ether synthesis","type":"exact"}],"termid":"GO:1901503"}


id: MONDO:0002142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An undifferentiated soft tissue sarcoma characterized by the presence of a pleomorphic malignant cellular infiltrate. It is also known as malignant fibrous histiocytoma.","definition_xrefs":["NCIT:C4247"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histiocytoma","termid":"MONDO:0005509"},{"relation_name":"is_a","term_name":"soft tissue sarcoma","termid":"MONDO:0018078"},{"relation_name":"is_a","term_name":"bone sarcoma","termid":"MONDO:0021054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"undifferentiated pleomorphic sarcoma","secondary_identifiers":["SCTID:443439001","UMLS:C0334463","MEDGEN:87248","ONCOTREE:MFH","EFO:1001972","DOID:1907","ICDO:8830/3","NCIT:C114541","HGNC:16982","ICD9:171.9","Orphanet:2023","MedDRA:10025552","GARD:6963","MONDO:0016069","MESH:D051677"],"synonyms":[{"name":"MFH","type":"exact"},{"name":"Storiform-pleomorphic MFH","type":"exact"},{"name":"Storiform-pleomorphic fibrous histiocytoma","type":"exact"},{"name":"Storiform-pleomorphic malignant fibrous histiocytoma","type":"exact"},{"name":"UPS","type":"exact"},{"name":"Unclassified Pleomorphic sarcoma (formerly \"MFH\")","type":"exact"},{"name":"Unclassified Pleomorphic sarcoma (formerly \"malignant fibrous histiocytoma\")","type":"exact"},{"name":"adult malignant fibrous histiocytoma","type":"exact"},{"name":"adult unclassified pleomorphic sarcoma","type":"exact"},{"name":"adult undifferentiated pleomorphic sarcoma","type":"exact"},{"name":"fibrous histiocytoma, malignant","type":"exact"},{"name":"fibrous histiocytoma, malignant (morphologic abnormality)","type":"exact"},{"name":"fibroxanthosarcoma","type":"exact"},{"name":"fibroxanthosarcoma (morphologic abnormality)","type":"exact"},{"name":"histiocytoma, fibrous, malignant","type":"exact"},{"name":"malignant fibrohistiocytic tumors","type":"related"},{"name":"malignant fibrohistiocytic tumours","type":"related"},{"name":"malignant fibrous cytoma","type":"exact"},{"name":"malignant fibrous histiocytoma","type":"exact"},{"name":"malignant fibrous histiocytoma of soft tissue and bone","type":"exact"},{"name":"malignant fibrous histiocytoma of the soft tissue and bone","type":"exact"},{"name":"malignant fibroxanthoma","type":"exact"},{"name":"unclassified pleomorphic sarcoma","type":"exact"},{"name":"undifferentiated pleomorphic sarcoma","type":"exact"},{"name":"undifferentiated pleomorphic sarcoma/malignant fibrous histiocytoma/high-grade spindle cell sarcoma","type":"related"},{"name":"undifferentiated pleomorphic soft tissue sarcoma","type":"exact"}],"termid":"MONDO:0002142","xrefs":{"Monarch":{"xref_id":"0002142"}}}


id: MONDO:0850271
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An acute megakaryocytic leukemia occurring in children with Down syndrome and that has material basis in mutation in the GATA1 gene.","definition_xrefs":["DOID:0080798"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute megakaryoblastic leukemia","termid":"MONDO:0018872"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0004992","MONDO:0005046"],"is_obsolete":false,"name":"myeloid leukemia associated with down syndrome","secondary_identifiers":["MEDGEN:416725","NCIT:C43223","UMLS:C2825149"],"termid":"MONDO:0850271","xrefs":{"Monarch":{"xref_id":"0850271"}}}


id: GO:0031297
data:
  {"annotated_genes":["SJAG_02698","SJAG_05180","SJAG_01584","SJAG_02724","SJAG_03898","SJAG_01185","SJAG_01076","SJAG_05372","SJAG_00177","SJAG_01044","SJAG_02079","SJAG_05012","SJAG_03097","SJAG_01221","SJAG_01374","SJAG_02198","SJAG_02465","SJAG_01677","SJAG_03728","SJAG_04183","SJAG_03843","SJAG_04971","SJAG_00623","SJAG_01832","SJAG_02294","SJAG_02439","SJAG_04272","SJAG_03780","SJAG_01410","SJAG_00727","SJAG_02992","SJAG_02299","SJAG_01572","SJAG_05237","SJAG_02214","SJAG_02822","SJAG_00935","SJAG_03300"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63339,71639,81248,81454,96620,99507,101296,102670,103193,107765,108668,110185,119511],"is_not":false,"summary":null,"term":"GO:0031297"},{"annotations":[92958,100254,96843,98192,91177,109764,111600,114575,98026,111122,100963,65348,97083,118865,109788],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990426"},{"annotations":[91007,118477,108160],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0120292"},{"annotations":[77546,114579],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071932"},{"annotations":[98194,101075,91609,112012,116345,118867,100965,111602,98697,91180,93549,117579],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0120290"}]},"cv_name":"biological_process","definition":"The process in which a DNA replication fork that has stalled is restored to a functional state and replication is restarted. The stalling may be due to DNA damage, DNA secondary structure, bound proteins, dNTP shortage, or other causes.","definition_xrefs":["PMID:17660542","GOC:vw","PMID:11459955","PMID:15367656"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated DNA replication maintenance of fidelity","termid":"GO:0045005"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00177":null,"SJAG_00623":null,"SJAG_00727":null,"SJAG_00935":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01185":null,"SJAG_01221":null,"SJAG_01374":null,"SJAG_01410":null,"SJAG_01572":null,"SJAG_01584":null,"SJAG_01677":null,"SJAG_01832":null,"SJAG_02079":null,"SJAG_02198":null,"SJAG_02214":null,"SJAG_02294":null,"SJAG_02299":null,"SJAG_02439":null,"SJAG_02465":null,"SJAG_02698":null,"SJAG_02724":null,"SJAG_02822":null,"SJAG_02992":null,"SJAG_03097":null,"SJAG_03300":null,"SJAG_03728":null,"SJAG_03780":null,"SJAG_03843":null,"SJAG_03898":null,"SJAG_04183":null,"SJAG_04272":null,"SJAG_04971":null,"SJAG_05012":null,"SJAG_05180":null,"SJAG_05237":null,"SJAG_05372":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006260","GO:0006259"],"is_obsolete":false,"name":"replication fork processing","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0034065"],"synonyms":[{"name":"collapsed replication fork processing","type":"exact"},{"name":"recovery from replication fork arrest","type":"exact"},{"name":"recovery from replication fork arrest at rDNA locus","type":"narrow"},{"name":"recovery from replication fork stalling","type":"exact"},{"name":"recovery from replication fork stalling at rDNA locus","type":"narrow"},{"name":"replication fork processing at rDNA locus","type":"narrow"},{"name":"replication fork processing at ribosomal DNA locus","type":"narrow"},{"name":"replication fork restart","type":"related"},{"name":"replication restart","type":"related"}],"termid":"GO:0031297","terms_by_termid":{"GO:0031297":null,"GO:0071932":null,"GO:0120290":null,"GO:0120292":null,"GO:1990426":null}}


id: PBO:0061809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 1 candidate 1 (pseudogene)","termid":"PBO:0061809"}


id: GO:0048132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The self-renewing division of a germline stem cell in the female gonad, to produce a daughter stem cell and a daughter germ cell, which will divide to form the female gametes.","definition_xrefs":["GOC:jid","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germline stem cell asymmetric division","termid":"GO:0098728"},{"relation_name":"part_of","term_name":"oogenesis","termid":"GO:0048477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line stem cell asymmetric division","secondary_identifiers":["GO:0048141"],"synonyms":[{"name":"female germ-line stem cell renewal","type":"exact"}],"termid":"GO:0048132"}


id: PBO:0067863
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 165","termid":"PBO:0067863"}


id: PBO:0110473
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CPSF6 pseudogene 1","termid":"PBO:0110473"}


id: MONDO:0032714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"facial dysmorphism, hypertrichosis, epilepsy, intellectual/developmental delay, and gingival overgrowth syndrome","secondary_identifiers":["GARD:18019","Orphanet:598603","OMIM:618381","UMLS:C5193066","MEDGEN:1679105"],"synonyms":[{"name":"FACIAL DYSMORPHISM, HYPERTRICHOSIS, EPILEPSY, INTELLECTUAL/DEVELOPMENTAL DELAY, AND GINGIVAL OVERGROWTH SYNDROME","type":"related"},{"name":"FHEIG","type":"related"}],"termid":"MONDO:0032714","xrefs":{"Monarch":{"xref_id":"0032714"}}}


id: PBO:0034595
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_frequency_of_meiotic_crossover_associated_with_gene_conversion","termid":"PBO:0034595"}


id: GO:1905847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cellular response to oxidopamine.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:23721876"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of response to stimulus","termid":"GO:0048585"},{"relation_name":"is_a","term_name":"regulation of cellular response to oxidopamine","termid":"GO:1905846"},{"relation_name":"negatively_regulates","term_name":"cellular response to oxidopamine","termid":"GO:1905842"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cellular response to oxidopamine","synonyms":[{"name":"down regulation of cellular response to oxidopamine","type":"exact"},{"name":"down-regulation of cellular response to oxidopamine","type":"exact"},{"name":"downregulation of cellular response to oxidopamine","type":"exact"},{"name":"inhibition of cellular response to oxidopamine","type":"narrow"}],"termid":"GO:1905847"}


id: GO:0052613
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: canthaxanthin + a reduced electron acceptor + oxygen = adonirubin + an oxidized electron acceptor + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete canthaxanthin 3-hydroxylase activity (obsolete GO:0052613)","synonyms":[{"name":"beta-carotene hydroxylase activity","type":"broad"},{"name":"carotene beta-ring hydroxylase activity","type":"broad"}],"termid":"GO:0052613"}


id: PBO:0082300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Arsenate reductase required for arsenate resistance; converts arsenate to arsenite which can then be exported from cells by Arr3p","termid":"PBO:0082300"}


id: MONDO:0100429
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"}]},"cv_name":"mondo","definition":"A cholestatic disorder characterized by (i) pruritus with onset in the second or third trimester of pregnancy, (ii) elevated serum aminotransferases and bile acid levels, and (iii) spontaneous relief of signs and symptoms within two to three weeks after delivery.","definition_xrefs":["Orphanet:69665"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intrahepatic cholestasis","termid":"MONDO:0019072"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"intrahepatic cholestasis of pregnancy","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MESH:C535932","UMLS:C0268318","DOID:0070227","icd11.foundation:1576251337","MEDGEN:82788","GARD:9804"],"synonyms":[{"name":"ICP","type":"exact"},{"name":"RICP","type":"related"},{"name":"cholestasis, intrahepatic of pregnancy","type":"related"},{"name":"familial intrahepatic cholestasis of pregnancy","type":"related"},{"name":"familial recurrent intrahepatic cholestasis of pregnancy","type":"related"},{"name":"gravidic intrahepatic cholestasis","type":"exact"},{"name":"intrahepatic cholestasis of pregnancy","type":"exact"},{"name":"pregnancy related cholestasis","type":"exact"},{"name":"pregnancy-related cholestasis","type":"exact"},{"name":"recurrent intrahepatic cholestasis of pregnancy","type":"exact"}],"termid":"MONDO:0100429","terms_by_termid":{"MONDO:0013995":null},"xrefs":{"Monarch":{"xref_id":"0100429"}}}


id: FYPO:0000677
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A transport phenotype in which protein localization to the prospore membrane is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization","termid":"FYPO:0001370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"abnormal protein localization to prospore membrane","synonyms":[{"name":"abnormal protein localisation to prospore membrane","type":"exact"},{"name":"abnormal protein localization to forespore membrane","type":"exact"}],"termid":"FYPO:0000677"}


id: PBO:0059146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M-phase specific PLK1 interacting protein","termid":"PBO:0059146"}


id: GO:0035735
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The bidirectional movement of large protein complexes along microtubules within a cilium that contributes to cilium assembly.","definition_xrefs":["GOC:cilia","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intraciliary transport","termid":"GO:0042073"},{"relation_name":"part_of","term_name":"cilium assembly","termid":"GO:0060271"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"intraciliary transport involved in cilium assembly","secondary_identifiers":["Reactome:R-HSA-5620924"],"synonyms":[{"name":"intraciliary transport involved in cilium morphogenesis","type":"related"},{"name":"intraflagellar transport","type":"broad"},{"name":"intraflagellar transport involved in cilium morphogenesis","type":"related"}],"termid":"GO:0035735"}


id: MONDO:0002129
data:
  {"annotated_genes":["SJAG_01349","SJAG_05979","SJAG_03905","SJAG_01748","SJAG_04287","SJAG_03453","SJAG_01013"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89373,89372,89217,89215,89216,89218],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[88146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm affecting the bone or articular cartilage.","definition_xrefs":["NCIT:C4016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system cancer","termid":"MONDO:0000637"},{"relation_name":"is_a","term_name":"bone neoplasm","termid":"MONDO:0019060"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_04287":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"bone cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:79002","EFO:1000350","SCTID:428281000","UMLS:C0279530","CSP:2019-1041","MESH:D001859","DOID:184","ICD9:170.9"],"synonyms":[{"name":"CA - bone cancer","type":"exact"},{"name":"bone cancer","type":"exact"},{"name":"bone neoplasm","type":"broad"},{"name":"bone tumor","type":"broad"},{"name":"bone tumour","type":"broad"},{"name":"cancer of bone","type":"exact"},{"name":"cancer of skeletal element","type":"exact"},{"name":"cancer of the bone","type":"exact"},{"name":"malignant bone neoplasm","type":"exact"},{"name":"malignant bone tumor","type":"exact"},{"name":"malignant bone tumour","type":"exact"},{"name":"malignant neoplasm of bone","type":"exact"},{"name":"malignant neoplasm of skeletal element","type":"exact"},{"name":"malignant neoplasm of the bone","type":"exact"},{"name":"malignant osseous neoplasm","type":"exact"},{"name":"malignant osseous tumor","type":"exact"},{"name":"malignant osseous tumour","type":"exact"},{"name":"malignant skeletal element neoplasm","type":"exact"},{"name":"malignant tumor of bone","type":"exact"},{"name":"malignant tumor of the bone","type":"exact"},{"name":"malignant tumour of bone","type":"exact"},{"name":"malignant tumour of the bone","type":"exact"},{"name":"osseous cancer","type":"exact"},{"name":"osseous tumor","type":"broad"},{"name":"osseous tumour","type":"broad"},{"name":"skeletal element cancer","type":"exact"}],"termid":"MONDO:0002129","terms_by_termid":{"MONDO:0002629":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0002129"}}}


id: PBO:0064082
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylserine decarboxylase","termid":"PBO:0064082"}


id: MONDO:0032872
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 42","secondary_identifiers":["MEDGEN:1684665","OMIM:618695","UMLS:C5231464","DOID:0111855","GARD:16373"],"synonyms":[{"name":"CILD42","type":"related"},{"name":"CILIARY DYSKINESIA, PRIMARY, 42","type":"related"},{"name":"Ciliary Dyskinesia, Primary, 42, Without Situs Inversus","type":"related"}],"termid":"MONDO:0032872","xrefs":{"Monarch":{"xref_id":"0032872"}}}


id: MONDO:0005220
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the collecting duct of renal tubule","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0004992"],"is_obsolete":false,"name":"collecting duct carcinoma","secondary_identifiers":["UMLS:C1266044","DOID:4464","icd11.foundation:1481495173","GARD:9573","MEDGEN:266092","ONCOTREE:CDRCC","Orphanet:247203","EFO:0003016","ICDO:8319/3","NCIT:C6194"],"synonyms":[{"name":"BDC","type":"exact"},{"name":"Bellini carcinoma","type":"exact"},{"name":"Bellini duct carcinoma","type":"exact"},{"name":"Bellini’s duct carcinoma","type":"related"},{"name":"CDC","type":"exact"},{"name":"cDC","type":"exact"},{"name":"carcinoma of collecting duct of renal tubule","type":"exact"},{"name":"carcinoma of collecting ducts of Bellini","type":"exact"},{"name":"carcinoma of kidney collecting duct","type":"exact"},{"name":"carcinoma of renal collecting duct","type":"exact"},{"name":"carcinoma of the collecting ducts of Bellini","type":"exact"},{"name":"carcinoma of the kidney collecting duct","type":"exact"},{"name":"carcinoma of the renal collecting duct","type":"exact"},{"name":"collecting duct carcinoma","type":"exact"},{"name":"collecting duct carcinoma of the kidney","type":"related"},{"name":"collecting duct of renal tubule carcinoma","type":"exact"},{"name":"collecting duct renal cancer","type":"exact"},{"name":"collecting duct renal cell carcinoma","type":"exact"},{"name":"kidney collecting duct carcinoma","type":"exact"},{"name":"renal carcinoma, collecting duct type","type":"exact"},{"name":"renal collecting duct carcinoma","type":"exact"},{"name":"renal medullary carcinoma","type":"related"}],"termid":"MONDO:0005220","xrefs":{"Monarch":{"xref_id":"0005220"}}}


id: PBO:0068913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 156, pseudogene","termid":"PBO:0068913"}


id: GO:0060355
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the rate, frequency or extent of cell adhesion molecule production. Cell adhesion molecule production is the appearance of a cell adhesion molecule as a result of its biosynthesis or a decrease in its catabolism.","definition_xrefs":["GOC:rl","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cellular process","termid":"GO:0048522"},{"relation_name":"is_a","term_name":"regulation of cell adhesion molecule production","termid":"GO:0060353"},{"relation_name":"positively_regulates","term_name":"cell adhesion molecule production","termid":"GO:0060352"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of cell adhesion molecule production","termid":"GO:0060355"}


id: PBO:0108700
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RanGAP Sbp1","termid":"PBO:0108700"}


id: MONDO:0010250
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"X-linked syndromic intellectual disability","termid":"MONDO:0020119"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intellectual disability, X-linked 49","secondary_identifiers":["Orphanet:485350","DOID:0112060","OMIM:300114","UMLS:C0796221","MEDGEN:923000","GARD:17880"],"synonyms":[{"name":"CLCN4-related X-linked intellectual disability syndrome","type":"exact"},{"name":"MRX49","type":"exact"},{"name":"Raynaud-Claes syndrome, X-linked dominant","type":"exact"},{"name":"intellectual disability, X-linked 15","type":"exact"},{"name":"intellectual disability, X-linked 49","type":"exact"},{"name":"mental retardation, X-linked 15","type":"exact"},{"name":"mental retardation, X-linked 49","type":"related"}],"termid":"MONDO:0010250","xrefs":{"Monarch":{"xref_id":"0010250"}}}


id: GO:0106117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of an acidocalcisome. An acidocalcisome is an electron-dense acidic membrane-bounded organelle which contains a matrix of pyrophosphate and polyphosphates with bound calcium and other cations.","definition_xrefs":["PMID:26523947","GO:0020022","PMID:25964650"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acidocalcisome organization","synonyms":[{"name":"acidocalcisome biogenesis","type":"exact"},{"name":"acidocalcisome organisation","type":"exact"},{"name":"acidocalcisome organization and biogenesis","type":"exact"},{"name":"metachromatic granule organization","type":"exact"},{"name":"polyphosphate vacuole organization","type":"related"},{"name":"volutin granule organization","type":"exact"}],"termid":"GO:0106117"}


id: MONDO:1010234
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Olivopontocerebellar atrophy that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease, non-human animal","termid":"MONDO:1012953"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olivopontocerebellar atrophy, non-human animal","secondary_identifiers":["OMIA:000740"],"termid":"MONDO:1010234","xrefs":{"Monarch":{"xref_id":"1010234"}}}


id: MOD:01583
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces an O3-hydrogen atom of a threonine residue with the Applied Biosystems iTRAQ8plex-121 reporter+balance group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"iTRAQ8plex-121 reporter+balance reagent acylated residue","termid":"MOD:01577"},{"relation_name":"is_a","term_name":"iTRAQ8plex reporter+balance reagent O-acylated residue","termid":"MOD:01714"},{"relation_name":"is_a","term_name":"O3-acylated L-threonine","termid":"MOD:02004"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iTRAQ8plex-121 reporter+balance reagent O3-acylated threonine","synonyms":[{"name":"(4-methylpiperazin-1-yl)acetyl","type":"exact"}],"termid":"MOD:01583"}


id: FYPO:0006795
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to actin cortical patches is abolished, and some of the protein is present in the nucleus instead.","definition_xrefs":["PMID:11076964","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"protein mislocalized to nucleus during vegetative growth","termid":"FYPO:0000784"},{"relation_name":"is_a","term_name":"abolished protein localization to actin cortical patch","termid":"FYPO:0006116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0001985","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"abolished protein localization to actin cortical patch, with protein mislocalized to nucleus","synonyms":[{"name":"abolished protein localisation to actin cortical patch, with protein mislocalised to nucleus, during vegetative growth","type":"exact"},{"name":"abolished protein localization to actin cortical patch, with protein mislocalized to nucleus, during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to actin cortical patch, with protein mislocalized to nucleus, during vegetative growth","type":"exact"},{"name":"abolished protein localization to actin patch, with protein mislocalized to nucleus","type":"exact"},{"name":"protein localization to actin cortical patch abolished, with protein mislocalized to nucleus, during vegetative growth","type":"exact"}],"termid":"FYPO:0006795"}


id: PBO:0090337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein complex assembly protein","termid":"PBO:0090337"}


id: PBO:0002855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA exonuclease Rrp17 (predicted)","termid":"PBO:0002855"}


id: MONDO:0700016
data:
  {"annotated_genes":["SJAG_00112"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87606],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014848"}]},"cv_name":"mondo","definition":"Chromosomal disorder in which chromosome 9 is affected.","definition_xrefs":["MONDO:patterns/chromosome_type"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal anomaly","termid":"MONDO:0020049"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00112":null},"genotype_count":0,"is_obsolete":false,"name":"chromosome 9 disorder","references_by_uniquename":{"PB_REF:0000006":null},"termid":"MONDO:0700016","terms_by_termid":{"MONDO:0014848":null},"xrefs":{"Monarch":{"xref_id":"0700016"}}}


id: MONDO:0014548
data:
  {"annotated_genes":["SJAG_04901","SJAG_04781"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87398,87399],"is_not":false,"summary":null,"term":"MONDO:0014548"}]},"cv_name":"mondo","definition":"Any long QT syndrome in which the cause of the disease is a mutation in the CALM1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"long QT syndrome","termid":"MONDO:0002442"},{"relation_name":"is_a","term_name":"familial long QT syndrome","termid":"MONDO:0019171"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04781":null,"SJAG_04901":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"long QT syndrome 14","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:16073","MEDGEN:864108","NCIT:C177534","OMIM:616247","DOID:0110655","UMLS:C4015671"],"synonyms":[{"name":"CALM1 long QT syndrome","type":"exact"},{"name":"LQT14","type":"exact"},{"name":"long QT syndrome 14","type":"exact"},{"name":"long QT syndrome caused by mutation in CALM1","type":"exact"},{"name":"long QT syndrome type 14","type":"exact"}],"termid":"MONDO:0014548","terms_by_termid":{"MONDO:0014548":null},"xrefs":{"Monarch":{"xref_id":"0014548"}}}


id: PBO:0064165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVC","termid":"PBO:0064165"}


id: GO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of RNA, ribonucleic acid, from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transmembrane transporter activity","termid":"GO:0051032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"RNA transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-203906"],"termid":"GO:0051033"}


id: MONDO:1011881
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tomaculous neuropathy, non-human animal","secondary_identifiers":["OMIA:001491"],"termid":"MONDO:1011881","xrefs":{"Monarch":{"xref_id":"1011881"}}}


id: PBO:0072895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sterol-C5-desaturase","termid":"PBO:0072895"}


id: MONDO:0010976
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A basal subtype of epidermolysis bullosa simplex EBS characterized by generalized or, less frequently, localized acral blistering.","definition_xrefs":["Orphanet:89838"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 1D, generalized, intermediate or severe, autosomal recessive","secondary_identifiers":["UMLS:C3715082","MESH:C563408","GARD:16778","MEDGEN:811576","OMIM:601001"],"synonyms":[{"name":"EBS, autosomal recessive K14","type":"exact"},{"name":"EBS-AR KRT14","type":"exact"},{"name":"EBSB1","type":"related"},{"name":"KRT14-related autosomal recessive EBS","type":"exact"},{"name":"KRT14-related autosomal recessive epidermolysis bullosa simplex","type":"exact"},{"name":"KRT14-related epidermolysis bullosa simplex","type":"exact"},{"name":"epidermolysis bullosa simplex 1D, generalized, intermediate or severe, autosomal recessive","type":"exact"},{"name":"epidermolysis bullosa simplex, autosomal recessive 1","type":"related"},{"name":"epidermolysis bullosa simplex, autosomal recessive K14","type":"related"},{"name":"epidermolysis bullosa simplex, autosomal recessive type 1","type":"exact"}],"termid":"MONDO:0010976","xrefs":{"Monarch":{"xref_id":"0010976"}}}


id: PBO:0075118
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 167","termid":"PBO:0075118"}


id: MONDO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A poliomyelitis that results in destruction located in motor neurons of central nervous system, has material basis in Human poliovirus 1, has material basis in Human poliovirus 2, or has material basis in Human poliovirus 3, which are transmitted by ingestion of food or water contaminated with feces, or transmitted by direct contact with the oral secretions. The infection has symptom loss of reflexes, has symptom muscle spasms, and has symptom acute flaccid paralysis.","definition_xrefs":["DOID:0050515"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poliomyelitis","termid":"MONDO:0017373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"paralytic poliomyelitis","secondary_identifiers":["UMLS:C1405301","MEDGEN:1684656"],"termid":"MONDO:0000341","xrefs":{"Monarch":{"xref_id":"0000341"}}}


id: GO:0050220
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: prostaglandin H(2) = prostaglandin E(2).","definition_xrefs":["RHEA:12893","EC:5.3.99.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"prostaglandin-E synthase activity","secondary_identifiers":["Reactome:R-HSA-265295","KEGG_REACTION:R02265","Reactome:R-HSA-2161660","MetaCyc:PROSTAGLANDIN-E-SYNTHASE-RXN"],"synonyms":[{"name":"(5Z,13E)-(15S)-9alpha,11alpha-epidioxy-15-hydroxyprosta-5,13-dienoate E-isomerase activity","type":"related"},{"name":"PGE isomerase activity","type":"related"},{"name":"PGE2 isomerase activity","type":"related"},{"name":"PGH-PGE isomerase activity","type":"related"},{"name":"Prostaglandin-H(2) E-isomerase activity","type":"related"},{"name":"endoperoxide isomerase activity","type":"related"},{"name":"prostaglandin H-E isomerase activity","type":"related"},{"name":"prostaglandin R-prostaglandin E isomerase activity","type":"related"},{"name":"prostaglandin endoperoxide E isomerase activity","type":"related"},{"name":"prostaglandin endoperoxide E2 isomerase activity","type":"related"},{"name":"prostaglandin-H2 E-isomerase activity","type":"related"}],"termid":"GO:0050220"}


id: PBO:0027676
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_single_or_double_cell_division,_small_cell","termid":"PBO:0027676"}


id: MONDO:0008771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An extremely rare syndrome which is characterized by hypoplastic amelogenesis imperfecta (hypoplastic dental enamel) and nephrocalcinosis (precipitation of calcium salts in renal tissue). Oral manifestations include yellow and misshaped teeth, delayed tooth eruption, and intrapulpal calcifications. Nephrocalcinosis is often asymptomatic but can progress during late childhood or early adulthood to impaired renal function (e.g. recurrent urinary infections and renal tubular acidosis), and rarely to end-stage renal failure.","definition_xrefs":["Orphanet:1031"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"amelogenesis imperfecta","termid":"MONDO:0019507"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta type 1G","secondary_identifiers":["UMLS:C2931783","DOID:0110066","MESH:C538241","OMIM:204690","OMIM:614253","MEDGEN:419162","Orphanet:171836","SCTID:109477002","GARD:646","ICD9:520.5"],"synonyms":[{"name":"AI1G","type":"exact"},{"name":"AIGFS","type":"exact"},{"name":"ERS","type":"exact"},{"name":"FAM20A amelogenesis imperfecta","type":"exact"},{"name":"absent enamel, nephrocalcinosis and apparently normal calcium metabolism","type":"related"},{"name":"amelogenesis imperfecta and gingival fibromatosis syndrome","type":"exact"},{"name":"amelogenesis imperfecta and nephrocalcinosis","type":"related"},{"name":"amelogenesis imperfecta caused by mutation in FAM20A","type":"exact"},{"name":"amelogenesis imperfecta hypoplastic type, IG","type":"related"},{"name":"amelogenesis imperfecta hypoplastic with nephrocalcinosis","type":"exact"},{"name":"amelogenesis imperfecta nephrocalcinosis","type":"related"},{"name":"amelogenesis imperfecta type IG","type":"exact"},{"name":"amelogenesis imperfecta, hypoplastic, with nephrocalcinosis","type":"related"},{"name":"amelogenesis imperfecta, type IG","type":"related"},{"name":"amelogenesis imperfecta, type IG (enamel-renal syndrome)","type":"exact"},{"name":"amelogenesis imperfecta-gingival hyperplasia syndrome","type":"exact"},{"name":"amelogenesis imperfecta-nephrocalcinosis syndrome","type":"related"},{"name":"enamel renal syndrome","type":"related"},{"name":"enamel-renal syndrome","type":"exact"},{"name":"enamel-renal-gingival syndrome","type":"exact"},{"name":"ers","type":"exact"},{"name":"generalised enamel hypoplasia and renal dysfunction","type":"related"},{"name":"generalized enamel hypoplasia and renal dysfunction","type":"related"}],"termid":"MONDO:0008771","xrefs":{"Monarch":{"xref_id":"0008771"}}}


id: MONDO:0006322
data:
  {"annotated_genes":["SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"}]},"cv_name":"mondo","definition":"A non-neoplastic disorder that affects the intrahepatic or extrahepatic bile ducts. Representative examples include cholangitis and biliary atresia.","definition_xrefs":["NCIT:C35774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bile duct disorder","termid":"MONDO:0002887"},{"relation_name":"is_a","term_name":"endocrine system disorder","termid":"MONDO:0005151"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03363":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"non-neoplastic bile duct disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C3275160","EFO:1000400","MEDGEN:476793"],"synonyms":[{"name":"non-neoplastic bile duct disorder","type":"exact"}],"termid":"MONDO:0006322","terms_by_termid":{"MONDO:0010939":null},"xrefs":{"Monarch":{"xref_id":"0006322"}}}


id: MOD:01981
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-threonine residue by a thioether bond to form 3-methyllanthionine with unresolved stereospecificity.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues with loss of water","termid":"MOD:00954"},{"relation_name":"is_a","term_name":"beta-carbon thioether crosslinked residues","termid":"MOD:01993"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"3-methyllanthionine","synonyms":[{"name":"2,6-diamino-3-methyl-4-thiaheptanedioic acid","type":"exact"},{"name":"2-amino-3-([2-amino-2-carboxyethyl]sulfanyl)butanoic acid","type":"exact"},{"name":"2-amino-3-[(2-amino-2-carboxyethyl)thio]butanoic acid","type":"exact"},{"name":"2-azanyl-3-[(2-azanyl-2-carboxyethyl)sulfanyl]butanoic acid","type":"exact"},{"name":"3-methyllanthionine","type":"exact"},{"name":"cysteine-3-L-butyrine thioether","type":"exact"}],"termid":"MOD:01981"}


id: GO:0051493
data:
  {"annotated_genes":["SJAG_03048","SJAG_03581","SJAG_04666","SJAG_02592","SJAG_02700","SJAG_00610","SJAG_01821","SJAG_01826","SJAG_03455","SJAG_00845","SJAG_02566","SJAG_02045","SJAG_02392","SJAG_03936","SJAG_02684","SJAG_00521","SJAG_02795","SJAG_04479","SJAG_04100","SJAG_00661","SJAG_00244","SJAG_03086","SJAG_01787","SJAG_04464","SJAG_00279","SJAG_00082","SJAG_03486","SJAG_01320","SJAG_04522","SJAG_01993","SJAG_02366","SJAG_03655","SJAG_05000","SJAG_04597","SJAG_01894","SJAG_04461","SJAG_00424","SJAG_00514","SJAG_02838","SJAG_03631","SJAG_04776","SJAG_02332","SJAG_01774","SJAG_03637","SJAG_04312","SJAG_00333","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81082,82131,94334,77494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"},{"annotations":[76458],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034316"},{"annotations":[100285],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000432"},{"annotations":[105710,92776,97864,112817,104383,96379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903500"},{"annotations":[103870],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031117"},{"annotations":[96421,92008],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[115420,96592,112575,89535,96422],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[113491],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110161"},{"annotations":[104861,117378,79874,79770,101457,75279,118547,75248,75992,73651,112152,80762],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032956"},{"annotations":[109648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032231"},{"annotations":[79323,81379,68861,69757,78683],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030833"},{"annotations":[105718,117379,107387,93152,102205,115104],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070507"},{"annotations":[72673],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031110"},{"annotations":[95821,121355],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903499"},{"annotations":[73397],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1901673"},{"annotations":[117110],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0110162"},{"annotations":[91884],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0060236"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the formation, arrangement of constituent parts, or disassembly of cytoskeletal structures.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of organelle organization","termid":"GO:0033043"},{"relation_name":"regulates","term_name":"cytoskeleton organization","termid":"GO:0007010"}],"gene_count":47,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00244":null,"SJAG_00279":null,"SJAG_00333":null,"SJAG_00424":null,"SJAG_00514":null,"SJAG_00521":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01320":null,"SJAG_01774":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01821":null,"SJAG_01826":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02045":null,"SJAG_02332":null,"SJAG_02366":null,"SJAG_02392":null,"SJAG_02566":null,"SJAG_02592":null,"SJAG_02684":null,"SJAG_02700":null,"SJAG_02795":null,"SJAG_02838":null,"SJAG_03048":null,"SJAG_03086":null,"SJAG_03455":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03637":null,"SJAG_03655":null,"SJAG_03936":null,"SJAG_04100":null,"SJAG_04312":null,"SJAG_04461":null,"SJAG_04464":null,"SJAG_04479":null,"SJAG_04522":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0007010"],"is_obsolete":false,"name":"regulation of cytoskeleton organization","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:32915139":null},"synonyms":[{"name":"regulation of cytoskeleton organisation","type":"exact"},{"name":"regulation of cytoskeleton organization and biogenesis","type":"related"}],"termid":"GO:0051493","terms_by_termid":{"GO:0030833":null,"GO:0031110":null,"GO:0031117":null,"GO:0032231":null,"GO:0032956":null,"GO:0034316":null,"GO:0051016":null,"GO:0060236":null,"GO:0070507":null,"GO:0110161":null,"GO:0110162":null,"GO:0120306":null,"GO:1901673":null,"GO:1903473":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:2000432":null}}


id: PBO:0086642
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; green fluorescent protein (GFP)-fusion protein localizes to the endoplasmic reticulum; YNR021W is not an essential gene","termid":"PBO:0086642"}


id: PBO:0052984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L antigen family member 3","termid":"PBO:0052984"}


id: GO:0051394
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of the nerve growth factor (NGF) receptor.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of signaling receptor activity","termid":"GO:0010469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of nerve growth factor receptor activity","synonyms":[{"name":"regulation of NGF receptor activity","type":"exact"}],"termid":"GO:0051394"}


id: MONDO:0009645
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic mucocutaneous candidiasis","termid":"MONDO:0015279"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"chronic mucocutaneous candidiasis due to monocyte chemotactic disorder","secondary_identifiers":["GARD:15203","MEDGEN:343238","OMIM:252250","UMLS:C1854982","MESH:C565371"],"synonyms":[{"name":"monocyte chemotactic disorder","type":"exact"}],"termid":"MONDO:0009645","xrefs":{"Monarch":{"xref_id":"0009645"}}}


id: RO:0002573
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relation that holds between an attribute or a qualifier and another attribute.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_modifier","termid":"RO:0002573"}


id: PBO:0077649
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TNF alpha induced protein 8 like 1","termid":"PBO:0077649"}


id: GO:0071480
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a gamma radiation stimulus. Gamma radiation is a form of electromagnetic radiation (EMR) or light emission of a specific frequency produced from sub-atomic particle interaction, such as electron-positron annihilation and radioactive decay. Gamma rays are generally characterized as EMR having the highest frequency and energy, and also the shortest wavelength, within the electromagnetic radiation spectrum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to gamma radiation","termid":"GO:0010332"},{"relation_name":"is_a","term_name":"cellular response to ionizing radiation","termid":"GO:0071479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to gamma radiation","synonyms":[{"name":"cellular response to gamma ray","type":"related"},{"name":"cellular response to gamma-ray photon","type":"related"}],"termid":"GO:0071480"}


id: PBO:0080179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 2","termid":"PBO:0080179"}


id: GO:2000769
data:
  {"annotated_genes":["SJAG_04522","SJAG_00333","SJAG_04666","SJAG_02222","SJAG_02536","SJAG_04509","SJAG_00596","SJAG_00610","SJAG_01799","SJAG_00661","SJAG_03637","SJAG_04461","SJAG_00845","SJAG_03581","SJAG_02022","SJAG_00236"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89907,94435,104863,108137],"is_not":false,"summary":null,"term":"GO:2000769"},{"annotations":[118647,109647],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000784"},{"annotations":[95752,107383,102200],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000247"},{"annotations":[105715],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061361"},{"annotations":[96595,97672,115103,106555,120870,93151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000100"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of establishment or maintenance of cell polarity regulating cell shape.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell shape","termid":"GO:0008360"},{"relation_name":"is_a","term_name":"regulation of establishment or maintenance of cell polarity","termid":"GO:0032878"},{"relation_name":"regulates","term_name":"establishment or maintenance of cell polarity regulating cell shape","termid":"GO:0071963"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00236":null,"SJAG_00333":null,"SJAG_00596":null,"SJAG_00610":null,"SJAG_00661":null,"SJAG_00845":null,"SJAG_01799":null,"SJAG_02022":null,"SJAG_02222":null,"SJAG_02536":null,"SJAG_03581":null,"SJAG_03637":null,"SJAG_04461":null,"SJAG_04509":null,"SJAG_04522":null,"SJAG_04666":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007163"],"is_obsolete":false,"name":"regulation of establishment or maintenance of cell polarity regulating cell shape","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:2000769","terms_by_termid":{"GO:0061361":null,"GO:2000100":null,"GO:2000247":null,"GO:2000769":null,"GO:2000784":null}}


id: PBO:0001520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap14","termid":"PBO:0001520"}


id: PBO:0040915
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BMS1 pseudogene 19","termid":"PBO:0040915"}


id: GO:0072370
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H2A by the addition of an phosphate group to a serine residue at position 121 of the histone.","definition_xrefs":["PMID:19965387","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H2A-S121 phosphorylation (obsolete GO:0072370)","synonyms":[{"name":"histone H2A phosphorylation at S121","type":"exact"},{"name":"histone H2AS121 phosphorylation","type":"exact"}],"termid":"GO:0072370"}


id: PBO:0060875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear export mediator factor","termid":"PBO:0060875"}


id: MONDO:0019176
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Trichorhinophalangeal syndromes (TRPS) type 1 and 3 are malformation syndromes characterized by short stature, sparse hair, a bulbous nasal tip and cone-shaped epiphyses, as well as severe generalized shortening of all phalanges, metacarpals and metatarsal bones.","definition_xrefs":["Orphanet:77258"],"gene_count":0,"genotype_count":0,"name":"obsolete trichorhinophalangeal syndrome type I or III (obsolete MONDO:0019176)","synonyms":[{"name":"trichorhinophalangeal syndrome type 1 and 3","type":"exact"}],"termid":"MONDO:0019176","xrefs":{"Monarch":{"xref_id":"0019176"}}}


id: GO:1904332
data:
  {"annotated_genes":["SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113814],"is_not":false,"summary":null,"term":"GO:1904332"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of error-prone translesion synthesis.","definition_xrefs":["GOC:TermGenie","PMID:22761594","GO_REF:0000058","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of DNA repair","termid":"GO:0045738"},{"relation_name":"is_a","term_name":"regulation of error-prone translesion synthesis","termid":"GO:1904331"},{"relation_name":"is_a","term_name":"negative regulation of DNA biosynthetic process","termid":"GO:2000279"},{"relation_name":"negatively_regulates","term_name":"error-prone translesion synthesis","termid":"GO:0042276"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00573":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006281"},{"rel_name":"negatively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006281"}],"interesting_parent_ids":["GO:0008150","GO:0006281","GO:0006259"],"is_obsolete":false,"name":"negative regulation of error-prone translesion synthesis","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of error-prone postreplication DNA repair","type":"related"},{"name":"down regulation of error-prone translesion synthesis","type":"exact"},{"name":"down regulation of mutagenic PRR","type":"exact"},{"name":"down regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"down-regulation of error-prone postreplication DNA repair","type":"related"},{"name":"down-regulation of error-prone translesion synthesis","type":"exact"},{"name":"down-regulation of mutagenic PRR","type":"exact"},{"name":"down-regulation of mutagenic postreplication DNA repair","type":"related"},{"name":"downregulation of error-prone postreplication DNA repair","type":"related"},{"name":"downregulation of error-prone translesion synthesis","type":"exact"},{"name":"downregulation of mutagenic PRR","type":"exact"},{"name":"downregulation of mutagenic postreplication DNA repair","type":"related"},{"name":"inhibition of error-prone postreplication DNA repair","type":"related"},{"name":"inhibition of error-prone translesion synthesis","type":"narrow"},{"name":"inhibition of mutagenic PRR","type":"narrow"},{"name":"inhibition of mutagenic postreplication DNA repair","type":"related"},{"name":"negative regulation of error-prone postreplication DNA repair","type":"related"},{"name":"negative regulation of mutagenic PRR","type":"exact"},{"name":"negative regulation of mutagenic postreplication DNA repair","type":"related"}],"termid":"GO:1904332","terms_by_termid":{"GO:1904332":null}}


id: MONDO:0037398
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare pulmonary disease characterized by primary or nonbacteremic pneumonia most frequently arising in an intensive care setting, or bacteremic pneumonia, which is typically associated with neutropenia. Chronic lower respiratory tract infection with development of episodes of pneumonia is common in patients with cystic fibrosis. Acute infections are potentially life-threatening. Patients present with fever, chills, dyspnea, cyanosis, productive cough, as well as signs of severe systemic toxicity. Alveolar hemorrhage, necrosis, and, eventually, cavity formation, are commonly seen.","definition_xrefs":["Orphanet:90066"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial pneumonia","termid":"MONDO:0004652"},{"relation_name":"is_a","term_name":"Pseudomonas aeruginosa infectious disease","termid":"MONDO:0040732"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pneumonia caused by pseudomonas aeruginosa infection","secondary_identifiers":["icd11.foundation:801706385","UMLS:C0920182","GARD:13613","MEDGEN:852026"],"termid":"MONDO:0037398","xrefs":{"Monarch":{"xref_id":"0037398"}}}


id: PBO:0042018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 74B","termid":"PBO:0042018"}


id: GO:0035552
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Removal of the methyl group from one or more nucleotides within a single-stranded DNA molecule involving the oxidation (i.e. electron loss) of one or more atoms.","definition_xrefs":["GOC:BHF","PMID:18775698","GOC:rl"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidative single-stranded DNA demethylation (obsolete GO:0035552)","synonyms":[{"name":"oxidative ssDNA demethylation","type":"exact"}],"termid":"GO:0035552"}


id: PBO:0070824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 2","termid":"PBO:0070824"}


id: GO:0009942
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The establishment, maintenance and elaboration of the longitudinal axis. In plants, this is the axis that runs from the shoot to the root.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"embryonic axis specification","termid":"GO:0000578"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"embryo development ending in seed dormancy","termid":"GO:0009793"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"longitudinal axis specification","synonyms":[{"name":"apical-basal pattern specification","type":"exact"},{"name":"longitudinal axis determination","type":"related"}],"termid":"GO:0009942"}


id: PBO:0055647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3086","termid":"PBO:0055647"}


id: GO:0033543
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A fatty acid beta-oxidation pathway by which fatty acids having cis-double bonds on even-numbered carbons are degraded. In this pathway, the intermediate 2,4-dienoyl-CoA is converted to trans-2-enoyl-CoA by 2,4-dienoyl-CoA reductase and delta3-delta2-enoyl-CoA isomerase; trans-2-enoyl-CoA returns to the core beta-oxidation pathway for further degradation. Fatty acid beta-oxidation begins with the addition of coenzyme A to a fatty acid, and ends when only two or three carbons remain (as acetyl-CoA or propionyl-CoA respectively).","definition_xrefs":["GOC:mah","MetaCyc:PWY-5138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid beta-oxidation, unsaturated, even number","termid":"GO:0033542"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid beta-oxidation, unsaturated, even number, reductase/isomerase pathway","termid":"GO:0033543"}


id: GO:0034197
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of triglyceride into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Triglycerides are important components of plant oils, animal fats and animal plasma lipoproteins.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acylglycerol transport","termid":"GO:0034196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"triglyceride transport","synonyms":[{"name":"triacylglycerol transport","type":"exact"}],"termid":"GO:0034197"}


id: PBO:0062767
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily U member 1 pseudogene","termid":"PBO:0062767"}


id: PATO:0002233
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located far (not close to) in space in relation to another entity.","definition_xrefs":["PATOC:PM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"far from","synonyms":[{"name":"distant from","type":"exact"},{"name":"remote from","type":"exact"}],"termid":"PATO:0002233"}


id: MONDO:0002824
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cardiomyopathy that is not due to abnormalities in heart muscle cells.","definition_xrefs":["Wikipedia:Cardiomyopathy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiomyopathy","termid":"MONDO:0004994"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"extrinsic cardiomyopathy","secondary_identifiers":["MEDGEN:739084","ICD9:425.8","DOID:3978","SCTID:195029002","UMLS:C1689817"],"synonyms":[{"name":"secondary cardiomyopathy","type":"exact"}],"termid":"MONDO:0002824","xrefs":{"Monarch":{"xref_id":"0002824"}}}


id: PBO:0000739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically upregulated gene Mug22","termid":"PBO:0000739"}


id: MONDO:0975925
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ameloblastoma","termid":"MONDO:0017795"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adenoid ameloblastoma","secondary_identifiers":["Orphanet:689430"],"termid":"MONDO:0975925","xrefs":{"Monarch":{"xref_id":"0975925"}}}


id: GO:1905421
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of plant organ morphogenesis.","definition_xrefs":["GOC:tb","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of anatomical structure morphogenesis","termid":"GO:0022603"},{"relation_name":"regulates","term_name":"plant organ morphogenesis","termid":"GO:1905392"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of plant organ morphogenesis","termid":"GO:1905421"}


id: GO:0000480
data:
  {"annotated_genes":["SJAG_04524","SJAG_04224","SJAG_02250"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72304,74864,79906],"is_not":false,"summary":null,"term":"GO:0000480"}]},"cv_name":"biological_process","definition":"Endonucleolytic cleavage within the 5'-External Transcribed Spacer (ETS) of a tricistronic rRNA transcript that contains the Small Subunit (SSU) rRNA, the 5.8S rRNA, and the Large Subunit (LSU) rRNA in that order from 5' to 3' along the primary transcript. Endonucleolytic cleavage within the 5'-ETS of the pre-RNA is conserved as one of the early steps of rRNA processing in all eukaryotes, but the specific position of cleavage is variable.","definition_xrefs":["PMID:10690410","PMID:15282326","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endonucleolytic cleavage of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000479"},{"relation_name":"part_of","term_name":"maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","termid":"GO:0000462"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02250":null,"SJAG_04224":null,"SJAG_04524":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0042254"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0042254","GO:0008150","GO:0044085","GO:0010467"],"is_obsolete":false,"name":"endonucleolytic cleavage in 5'-ETS of tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"endonucleolytic cleavage at A-prime","type":"narrow"},{"name":"endonucleolytic cleavage at A0","type":"narrow"}],"termid":"GO:0000480","terms_by_termid":{"GO:0000480":null}}


id: MOD:01987
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-cysteine residue and an L-serine residue by a thioether bond to form 2-(S-L-cysteinyl)-D-serine.","definition_xrefs":["RESID:AA0624","PubMed:21786372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"stereoisomerized residue","termid":"MOD:00664"},{"relation_name":"is_a","term_name":"alpha-carbon thioether crosslinked residues","termid":"MOD:01992"},{"relation_name":"is_a","term_name":"crosslinked D-serine residue","termid":"MOD:02064"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"2-(L-cystein-S-yl)-D-serine","synonyms":[{"name":"(2R,5S)-2,5-diamino-5-carboxy-6-hydroxy-4-thiahexanoic acid","type":"exact"},{"name":"(2S)-2-amino-2-([(2R)-2-amino-2-carboxyethyl]sulfanyl)-3-hydroxypropanoic acid","type":"exact"}],"termid":"MOD:01987"}


id: MONDO:1011836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cerebellar cortical atrophy, non-human animal","secondary_identifiers":["OMIA:000177"],"termid":"MONDO:1011836","xrefs":{"Monarch":{"xref_id":"1011836"}}}


id: GO:0097276
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any biological process involved in the maintenance of an internal steady state of creatinine at the level of the cell.","definition_xrefs":["PMID:12695560","GOC:yaf"],"gene_count":0,"genotype_count":0,"name":"obsolete cellular creatinine homeostasis (obsolete GO:0097276)","termid":"GO:0097276"}


id: PBO:0085119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nucleolar protein; constituent of 66S pre-ribosomal particles; depletion leads to defects in rRNA processing and a block in the assembly of large ribosomal subunits; possesses a sigma(70)-like RNA-binding motif","termid":"PBO:0085119"}


id: PR:P41892
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cdc7 gene.","definition_xrefs":["UniProtKB:P41892","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein 7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC21.06c","synonyms":[{"name":"Spom972h-cdc7","type":"exact"}],"termid":"PR:P41892"}


id: PBO:0029092
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_pre-autophagosomal_structure","termid":"PBO:0029092"}


id: PBO:0050103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group box 1 pseudogene 13","termid":"PBO:0050103"}


id: FYPO:0000059
data:
  {"alleles_by_uniquename":{"SJAG_00118:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00118","name":"mid2delta","uniquename":"SJAG_00118:allele-1"},"SJAG_00871:allele-1":{"allele_type":"amino_acid_mutation","description":"cut3-T19E","gene_uniquename":"SJAG_00871","name":"cut3-T19E","uniquename":"SJAG_00871:allele-1"},"SJAG_01143:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01143","name":"mid1delta","uniquename":"SJAG_01143:allele-1"},"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"},"SJAG_01956:allele-1":{"allele_type":"amino_acid_mutation","description":"E405K ts","gene_uniquename":"SJAG_01956","name":"nuc2-1051","uniquename":"SJAG_01956:allele-1"},"SJAG_02392:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02392","name":"pom1delta","uniquename":"SJAG_02392:allele-1"},"SJAG_02592:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_02592","name":"sty1delta","uniquename":"SJAG_02592:allele-1"},"SJAG_03351:allele-1":{"allele_type":"amino_acid_mutation","description":"A186T 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