# terms

id: PBO:0088602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"7,8-diamino-pelargonic acid aminotransferase (DAPA)","termid":"PBO:0088602"}


id: FYPO:0001858
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of fatty acid synthase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased catalytic activity","termid":"FYPO:0000662"},{"relation_name":"is_a","term_name":"abnormal fatty acid synthase activity","termid":"FYPO:0000720"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000652","FYPO:0000654"],"is_obsolete":false,"name":"increased fatty acid synthase activity","synonyms":[{"name":"increased FAS activity","type":"exact"}],"termid":"FYPO:0001858"}


id: GO:1990844
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A mitochondrion that occurs in between fibrils of striated muscle cells and responds in distinct ways to physiological triggers.","definition_xrefs":["PMID:26039174","PMID:23297307"],"gene_count":0,"genotype_count":0,"name":"obsolete interfibrillar mitochondrion (obsolete GO:1990844)","synonyms":[{"name":"IFM","type":"exact"},{"name":"IMF mitochondrion","type":"exact"},{"name":"intermyofibrillar mitochondrion","type":"exact"}],"termid":"GO:1990844"}


id: PBO:0045474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"developmentally regulated GTP binding protein 2","termid":"PBO:0045474"}


id: MONDO:0004376
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive, non-metastasizing neoplasm with sweat duct differentiation that arises in the area of the nipple. Local recurrences have been reported.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nipple neoplasm","termid":"MONDO:0002482"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"infiltrating nipple syringomatous adenoma","secondary_identifiers":["MEDGEN:825590","DOID:7839","NCIT:C40363","UMLS:C3839745"],"synonyms":[{"name":"infiltrating nipple syringomatous adenoma","type":"exact"},{"name":"nipple syringomatous adenoma","type":"exact"}],"termid":"MONDO:0004376","xrefs":{"Monarch":{"xref_id":"0004376"}}}


id: PBO:0074111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 29 member 3","termid":"PBO:0074111"}


id: GO:0008318
data:
  {"annotated_genes":["SJAG_03029","SJAG_04923","SJAG_02583","SJAG_04434","SJAG_03810"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73224,75897],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004662"},{"annotations":[73223,75484],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004660"},{"annotations":[80899,75783,103428],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004663"}]},"cv_name":"molecular_function","definition":"Catalysis of the covalent addition of an isoprenoid group such as a farnesyl or geranylgeranyl group via thioether linkages to a cysteine residue in a protein.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"prenyltransferase activity","termid":"GO:0004659"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a protein","termid":"GO:0140096"}],"gene_count":5,"genes_by_uniquename":{"SJAG_02583":null,"SJAG_03029":null,"SJAG_03810":null,"SJAG_04434":null,"SJAG_04923":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016765","GO:0016740","GO:0003674","GO:0140096","GO:0003824"],"is_obsolete":false,"name":"protein prenyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008244"],"termid":"GO:0008318","terms_by_termid":{"GO:0004660":null,"GO:0004662":null,"GO:0004663":null}}


id: GO:0009006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete siroheme synthase activity (obsolete GO:0009006)","synonyms":[{"name":"sirohaem synthase activity","type":"exact"},{"name":"siroheme synthase activity","type":"exact"}],"termid":"GO:0009006"}


id: GO:0039507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which a virus stops, prevents, or reduces the frequency, rate or extent of the functional activity of a host protein.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete suppression by virus of host molecular function (obsolete GO:0039507)","synonyms":[{"name":"down regulation by virus of host protein function","type":"exact"},{"name":"down-regulation by virus of host protein function","type":"exact"},{"name":"inhibition by virus of host protein function","type":"narrow"},{"name":"inhibition of host protein function","type":"narrow"},{"name":"negative regulation by virus of host molecular function","type":"exact"},{"name":"negative regulation by virus of host protein function","type":"exact"}],"termid":"GO:0039507"}


id: GO:0061444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of an endocardial cushion cell over time, from its formation to the mature state.","definition_xrefs":["GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac cell development","termid":"GO:0055006"},{"relation_name":"part_of","term_name":"endocardial cushion cell differentiation","termid":"GO:0061443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endocardial cushion cell development","termid":"GO:0061444"}


id: GO:0016997
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of alpha-glycosidic linkages in oligo- or poly(sialic) acids.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016798","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"alpha-sialidase activity","termid":"GO:0016997"}


id: PBO:0080759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XG pseudogene, Y-linked 2","termid":"PBO:0080759"}


id: GO:0008898
data:
  {"annotated_genes":["SJAG_04425"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[78287],"is_not":false,"summary":null,"term":"GO:0008898"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + L-homocysteine = S-adenosyl-L-homocysteine + L-methionine.","definition_xrefs":["RHEA:21820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-methyltransferase activity","termid":"GO:0008172"},{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0003674","GO:0016741"],"is_obsolete":false,"name":"S-adenosylmethionine-homocysteine S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine S-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:L-homocysteine methyltransferase activity","type":"related"},{"name":"S-adenosylmethionine homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine-homocysteine transmethylase activity","type":"related"},{"name":"S-adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"adenosylmethionine transmethylase activity","type":"related"},{"name":"adenosylmethionine:homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine methyltransferase activity","type":"related"},{"name":"homocysteine transmethylase activity","type":"related"}],"termid":"GO:0008898","terms_by_termid":{"GO:0008898":null}}


id: GO:0017150
data:
  {"annotated_genes":["SJAG_00174","SJAG_03240","SJAG_01041","SJAG_03236"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[111677],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102262"},{"annotations":[111678],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102263"},{"annotations":[106716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102264"},{"annotations":[61436],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102266"},{"annotations":[61437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102267"},{"annotations":[67434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0102265"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 5,6-dihydrouridine in tRNA + NAD(P)+ = a uridine in tRNA + H+ + NAD(P)H.","definition_xrefs":["PMID:22123979","PMID:11983710"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dihydrouridine synthase activity","termid":"GO:0106413"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00174":null,"SJAG_01041":null,"SJAG_03236":null,"SJAG_03240":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0003674","GO:0140101","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"tRNA dihydrouridine synthase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-6782296"],"termid":"GO:0017150","terms_by_termid":{"GO:0102262":null,"GO:0102263":null,"GO:0102264":null,"GO:0102265":null,"GO:0102266":null,"GO:0102267":null}}


id: MONDO:0004859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"gallbladder disorder","termid":"MONDO:0005281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"hydrops of gallbladder","secondary_identifiers":["UMLS:C0152445","DOID:9717","icd11.foundation:532595534","ICD9:575.3","ICD10CM:K82.1","SCTID:47312008","MEDGEN:509035"],"termid":"MONDO:0004859","xrefs":{"Monarch":{"xref_id":"0004859"}}}


id: MONDO:1011603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Type 2 diabetes mellitus that occurs in crab-eating macaque.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"type 2 diabetes mellitus, non-human animal","termid":"MONDO:1011402"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 2 diabetes mellitus, crab-eating macaque","secondary_identifiers":["OMIA:000284-9541"],"termid":"MONDO:1011603","xrefs":{"Monarch":{"xref_id":"1011603"}}}


id: MONDO:0019154
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Androgen insensitivity syndrome (AIS) is a disorder of sex development (DSD) characterized by the presence of female external genitalia, ambiguous genitalia or variable defects in virilization in a 46,XY individual with absent or partial responsiveness to age-appropriate levels of androgens. It comprises two clinical subgroups: complete AIS (CAIS) and partial AIS (PAIS).","definition_xrefs":["Orphanet:754"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"46,XY disorder of sex development","termid":"MONDO:0020040"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome","secondary_identifiers":["ICD10CM:E34.5","ICD9:259.5","SCTID:12313004","ICD9:259.8","MedDRA:10056292","DOID:4674","NANDO:2200391","NCIT:C27226","UMLS:C0039585","OMIM:300068","GARD:5803","MEDGEN:21102","ICD9:259.51","MESH:D013734"],"synonyms":[{"name":"AIS","type":"broad"},{"name":"AR deficiency","type":"related"},{"name":"DHTR deficiency","type":"related"},{"name":"Feminisation - testicular","type":"related"},{"name":"Goldberg - Maxwell syndrome","type":"exact"},{"name":"Goldberg-Maxwell syndrome","type":"exact"},{"name":"Morris syndrome","type":"exact"},{"name":"androgen insensitivity syndrome","type":"exact"},{"name":"androgen insensitivity, X-linked recessive","type":"exact"},{"name":"androgen receptor deficiency","type":"related"},{"name":"androgen resistance syndrome","type":"exact"},{"name":"androgen-insensitivity syndrome","type":"exact"},{"name":"dihydrotestosterone receptor deficiency","type":"related"},{"name":"testicular feminization","type":"exact"},{"name":"testicular feminization syndrome","type":"exact"},{"name":"testicular feminization syndrome (formerly)","type":"related"}],"termid":"MONDO:0019154","xrefs":{"Monarch":{"xref_id":"0019154"}}}


id: MONDO:0017148
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Heritable pulmonary arterial hypertension (HPAH) is a form of pulmonary arterial hypertension (PAH), occurring due to mutations in PAH predisposing genes or in a familial context. HPAH is characterized by elevated pulmonary arterial resistance leading to right heart failure. HPAH is progressive and potentially fatal.","definition_xrefs":["Orphanet:275777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"pulmonary arterial hypertension","termid":"MONDO:0015924"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heritable pulmonary arterial hypertension","secondary_identifiers":["MEDGEN:90953","UMLS:C0340543","GARD:11914","NCIT:C121945","SCTID:697897003","OMIMPS:178600","NANDO:2201047"],"synonyms":[{"name":"FPAH","type":"exact"},{"name":"HPAH","type":"exact"},{"name":"HpaH","type":"exact"},{"name":"familial pulmonary arterial hypertension","type":"exact"},{"name":"hereditary pulmonary arterial hypertension","type":"exact"}],"termid":"MONDO:0017148","xrefs":{"Monarch":{"xref_id":"0017148"}}}


id: GO:0008855
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the exonucleolytic cleavage in either 5' to 3' or 3' to 5' direction to yield 5'-phosphomononucleotides.","definition_xrefs":["EC:3.1.11.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA exonuclease activity, producing 5'-phosphomonoesters","termid":"GO:0016895"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0004527"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"}],"interesting_parent_ids":["GO:0003824","GO:0004527","GO:0003674","GO:0016787","GO:0140097","GO:0016788"],"is_obsolete":false,"name":"exodeoxyribonuclease VII activity","secondary_identifiers":["MetaCyc:3.1.11.6-RXN"],"synonyms":[{"name":"E. coli exonuclease VII","type":"related"},{"name":"E. coli exonuclease VII activity","type":"narrow"},{"name":"Escherichia coli exonuclease VII","type":"related"},{"name":"endodeoxyribonuclease VII","type":"related"},{"name":"exonuclease VII activity","type":"related"}],"termid":"GO:0008855"}


id: PBO:0030892
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_oxidative_stress_during_vegetative_growth","termid":"PBO:0030892"}


id: PBO:0113757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved fungal protein, OB fold, predicted role in DNA metabolism","termid":"PBO:0113757"}


id: PBO:0051009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin superfamily DCC subclass member 4","termid":"PBO:0051009"}


id: GO:0034568
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: isoproturon + H2O = formaldehyde + monodemethylisoproturon + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0892"],"gene_count":0,"genotype_count":0,"name":"obsolete isoproturon dimethylaminedehydrogenase activity (obsolete GO:0034568)","termid":"GO:0034568"}


id: PBO:0050362
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 65","termid":"PBO:0050362"}


id: MONDO:0007482
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Dyschondrosteosis - nephritis is characterized by the association of short stature due to mesomelic shortening of the limbs and Madelung deformity, with hereditary nephritis.","definition_xrefs":["Orphanet:1765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal dysplasia","termid":"MONDO:0018230"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dyschondrosteosis-nephritis syndrome","secondary_identifiers":["MEDGEN:342135","MESH:C565080","GARD:1994","OMIM:127350","UMLS:C1851986"],"synonyms":[{"name":"dyschondrosteosis and nephritis","type":"related"},{"name":"dyschondrosteosis nephritis","type":"related"},{"name":"mesomelic shortening and hereditary nephritis","type":"related"}],"termid":"MONDO:0007482","xrefs":{"Monarch":{"xref_id":"0007482"}}}


id: PBO:0042381
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD247 molecule","termid":"PBO:0042381"}


id: GO:0042594
data:
  {"annotated_genes":["SJAG_02380","SJAG_01184","SJAG_00845","SJAG_00209","SJAG_00534","SJAG_03602","SJAG_02973","SJAG_02389","SJAG_04873","SJAG_02424","SJAG_01509","SJAG_04067","SJAG_03486","SJAG_03371","SJAG_02331","SJAG_00233","SJAG_02699","SJAG_02026","SJAG_04031","SJAG_04743","SJAG_02474","SJAG_04032","SJAG_01245","SJAG_03519","SJAG_00380","SJAG_02878","SJAG_00169","SJAG_01885","SJAG_00781","SJAG_02292","SJAG_03309","SJAG_02785","SJAG_00256","SJAG_01970","SJAG_00457","SJAG_03048","SJAG_04677"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[77851,63141,75949,74086,75605,73490,96690,97236],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034198"},{"annotations":[100439,71966,102459,78001,78034,59214],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042149"},{"annotations":[59859,114852,96120,102507,79666],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010106"},{"annotations":[115397,74186,109608,115396],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016036"},{"annotations":[78391,82367,96638,73580,74483,79133,76675,80280],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009267"},{"annotations":[117649],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031142"},{"annotations":[71311,68346],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903833"},{"annotations":[89859,103410],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1905287"},{"annotations":[104404],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904547"}]},"cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a starvation stimulus, deprivation of nourishment.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to stress","termid":"GO:0006950"},{"relation_name":"is_a","term_name":"response to nutrient levels","termid":"GO:0031667"}],"gene_count":37,"genes_by_uniquename":{"SJAG_00169":null,"SJAG_00209":null,"SJAG_00233":null,"SJAG_00256":null,"SJAG_00380":null,"SJAG_00457":null,"SJAG_00534":null,"SJAG_00781":null,"SJAG_00845":null,"SJAG_01184":null,"SJAG_01245":null,"SJAG_01509":null,"SJAG_01885":null,"SJAG_01970":null,"SJAG_02026":null,"SJAG_02292":null,"SJAG_02331":null,"SJAG_02380":null,"SJAG_02389":null,"SJAG_02424":null,"SJAG_02474":null,"SJAG_02699":null,"SJAG_02785":null,"SJAG_02878":null,"SJAG_02973":null,"SJAG_03048":null,"SJAG_03309":null,"SJAG_03371":null,"SJAG_03486":null,"SJAG_03519":null,"SJAG_03602":null,"SJAG_04031":null,"SJAG_04032":null,"SJAG_04067":null,"SJAG_04677":null,"SJAG_04743":null,"SJAG_04873":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to starvation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0042594","terms_by_termid":{"GO:0009267":null,"GO:0010106":null,"GO:0016036":null,"GO:0031142":null,"GO:0034198":null,"GO:0042149":null,"GO:1903833":null,"GO:1904547":null,"GO:1905287":null}}


id: PR:Q09669
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An alcohol dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alcohol dehydrogenase 4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC5H10.06c","secondary_identifiers":["UniProtKB:Q09669"],"synonyms":[{"name":"Spom972h-yiaY","type":"exact"},{"name":"alcohol dehydrogenase IV (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09669"}


id: GO:0000354
data:
  {"annotated_genes":["SJAG_04230"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119893],"is_not":false,"summary":null,"term":"GO:0000354"}]},"cv_name":"biological_process","definition":"Assembly of a spliceosomal complex containing the intact pre-mRNA and all of the spliceosomal snRNPs. This occurs when the tri-snRNP associates with the pre-mRNA and associated snRNPs in an ATP-dependent manner.","definition_xrefs":["GOC:krc","GOC:mtg_mpo","ISBN:0879695897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-RNA complex assembly","termid":"GO:0022618"},{"relation_name":"part_of","term_name":"spliceosomal complex assembly","termid":"GO:0000245"},{"relation_name":"part_of","term_name":"mRNA cis splicing, via spliceosome","termid":"GO:0045292"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04230":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0016071"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016071","GO:0065003","GO:0008150","GO:0010467","GO:0044085"],"is_obsolete":false,"name":"cis assembly of pre-catalytic spliceosome","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0000361","GO:0000360"],"synonyms":[{"name":"cis assembly of U12-type pre-catalytic spliceosome","type":"narrow"},{"name":"cis assembly of U2-type pre-catalytic spliceosome","type":"narrow"},{"name":"formation of spliceosomal A2-1 complex","type":"narrow"},{"name":"formation of spliceosomal B1 complex","type":"narrow"},{"name":"spliceosomal A2-1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal A2-1 complex formation","type":"narrow"},{"name":"spliceosomal B1 complex biosynthesis","type":"narrow"},{"name":"spliceosomal B1 complex formation","type":"narrow"}],"termid":"GO:0000354","terms_by_termid":{"GO:0000354":null}}


id: PBO:0039770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AQP4 antisense RNA 1","termid":"PBO:0039770"}


id: MOD:01203
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-[(pyrid-3-yl)acetyl]lysine.","definition_xrefs":["PubMed:9276974","Unimod:25#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyridylacetylated residue","termid":"MOD:00418"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"N6-(pyridylacetyl)lysine","synonyms":[{"name":"Pyridylacetyl","type":"related"},{"name":"pyridylacetyl","type":"related"}],"termid":"MOD:01203"}


id: MOD:00125
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to hypusine, N6-(4-amino-2-hydroxybutyl)-L-lysine.","definition_xrefs":["PubMed:6806267","PubMed:8108861","RESID:AA0116","Unimod:379#K","DeltaMass:0"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"L-deoxyhypusine","termid":"MOD:01880"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"},{"relation_name":"is_a","term_name":"4-aminobutylated residue","termid":"MOD:01884"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypusine","synonyms":[{"name":"(2S)-2-amino-6-([(2R)-4-amino-2-hydroxybutyl]amino)hexanoic acid","type":"exact"},{"name":"(2S,9R)-2,11-diazanyl-9-hydroxy-7-azaundecanoic acid","type":"exact"},{"name":"(2S,9R)-hypusine","type":"exact"},{"name":"2-azanyl-6-[(4-azanyl-2-hydroxybutyl)azanyl]hexanoic acid","type":"exact"},{"name":"Hypu","type":"exact"},{"name":"Hypusine","type":"related"},{"name":"L-hypusine","type":"exact"},{"name":"MOD_RES Hypusine","type":"exact"},{"name":"N-(4-NH2-2-OH-butyl)- (of Lysine)","type":"exact"},{"name":"N6-(4-amino-2-hydroxybutyl)-L-lysine","type":"exact"},{"name":"hypusine","type":"related"}],"termid":"MOD:00125"}


id: PBO:0054206
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1586","termid":"PBO:0054206"}


id: PBO:0042944
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"choline O-acetyltransferase","termid":"PBO:0042944"}


id: PBO:0059488
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methionine sulfoxide reductase B3","termid":"PBO:0059488"}


id: PBO:0062458
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 7 subfamily E member 136 pseudogene","termid":"PBO:0062458"}


id: PBO:0030325
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_actin_cortical_patch_localization","termid":"PBO:0030325"}


id: MONDO:0035314
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare congenital tricuspid malformation characterized by irregular thickening of the leaflet tissue by myxoid connective tissue in a normally delaminated tricuspid valve, without septal leaflet displacement, and without an atrialized right ventricle. The chordae tendineae may be short or absent. The affected valve is stenotic and/or incompetent. Clinically, most patients are asymptomatic and are diagnosed in the context of the evaluation of a murmur. [Orphanet:555874]","definition_xrefs":["Orphanet:555874"],"gene_count":0,"genotype_count":0,"name":"obsolete congenital tricuspid valve dysplasia (obsolete MONDO:0035314)","secondary_identifiers":["ICD10CM:Q22.8"],"termid":"MONDO:0035314","xrefs":{"Monarch":{"xref_id":"0035314"}}}


id: GO:0106279
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of the UDP-N-acetylglucosamine biosynthetic process.","definition_xrefs":["PMID:32579556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of biosynthetic process","termid":"GO:0009890"},{"relation_name":"is_a","term_name":"negative regulation of nucleobase-containing compound metabolic process","termid":"GO:0045934"},{"relation_name":"is_a","term_name":"negative regulation of phosphate metabolic process","termid":"GO:0045936"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"regulation of UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0106278"},{"relation_name":"negatively_regulates","term_name":"UDP-N-acetylglucosamine biosynthetic process","termid":"GO:0006048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"negative regulation of UDP-N-acetylglucosamine biosynthetic process","synonyms":[{"name":"negative regulation of UDP-GlcNAc biosynthesis","type":"related"},{"name":"negative regulation of UDP-GlcNAc biosynthetic process","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine anabolism","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine biosynthesis","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine formation","type":"related"},{"name":"negative regulation of UDP-N-acetylglucosamine synthesis","type":"related"}],"termid":"GO:0106279"}


id: PBO:0084379
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Low-affinity amino acid permease; may act to supply the cell with amino acids as nitrogen source in nitrogen-poor conditions; transcription is induced under conditions of sulfur limitation; plays a role in regulating Ty1 transposition","termid":"PBO:0084379"}


id: MONDO:0002406
data:
  {"annotated_genes":["SJAG_04109","SJAG_03850"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87694],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008296"},{"annotations":[88515],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008218"}]},"cv_name":"mondo","definition":"An inflammatory process affecting the skin. Signs include red rash, itching, and blister formation. Representative examples are contact dermatitis, atopic dermatitis, and seborrheic dermatitis.","definition_xrefs":["NCIT:C2983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"inflammatory disease","termid":"MONDO:0021166"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03850":null,"SJAG_04109":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dermatitis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:2723","SCTID:43116000","ICD9:692.9","UMLS:C3875321","MESH:D003872","MEDGEN:849741"],"synonyms":[{"name":"inflammation of skin","type":"exact"},{"name":"inflammation of the skin","type":"exact"},{"name":"inflammation of zone of skin","type":"exact"},{"name":"inflammatory skin disease","type":"exact"},{"name":"skin inflammation","type":"exact"},{"name":"zone of skin inflammation","type":"exact"}],"termid":"MONDO:0002406","terms_by_termid":{"MONDO:0008218":null,"MONDO:0008296":null},"xrefs":{"Monarch":{"xref_id":"0002406"}}}


id: GO:1900705
data:
  {"annotated_genes":["SJAG_00792"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96067],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905569"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of siderophore biosynthetic process.","definition_xrefs":["GOC:TermGenie","GOC:di"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of siderophore biosynthetic process","termid":"GO:1900704"},{"relation_name":"negatively_regulates","term_name":"siderophore biosynthetic process","termid":"GO:0019290"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00792":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"negative regulation of siderophore biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of siderochrome biosynthesis","type":"narrow"},{"name":"down regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"down regulation of siderophore anabolism","type":"exact"},{"name":"down regulation of siderophore biosynthesis","type":"exact"},{"name":"down regulation of siderophore biosynthetic process","type":"exact"},{"name":"down regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"down regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"down regulation of siderophore formation","type":"exact"},{"name":"down regulation of siderophore synthesis","type":"exact"},{"name":"down-regulation of siderochrome biosynthesis","type":"narrow"},{"name":"down-regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"down-regulation of siderophore anabolism","type":"exact"},{"name":"down-regulation of siderophore biosynthesis","type":"exact"},{"name":"down-regulation of siderophore biosynthetic process","type":"exact"},{"name":"down-regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"down-regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"down-regulation of siderophore formation","type":"exact"},{"name":"down-regulation of siderophore synthesis","type":"exact"},{"name":"downregulation of siderochrome biosynthesis","type":"narrow"},{"name":"downregulation of siderochrome biosynthetic process","type":"narrow"},{"name":"downregulation of siderophore anabolism","type":"exact"},{"name":"downregulation of siderophore biosynthesis","type":"exact"},{"name":"downregulation of siderophore biosynthetic process","type":"exact"},{"name":"downregulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"downregulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"downregulation of siderophore formation","type":"exact"},{"name":"downregulation of siderophore synthesis","type":"exact"},{"name":"inhibition of siderochrome biosynthesis","type":"narrow"},{"name":"inhibition of siderochrome biosynthetic process","type":"narrow"},{"name":"inhibition of siderophore anabolism","type":"exact"},{"name":"inhibition of siderophore biosynthesis","type":"exact"},{"name":"inhibition of siderophore biosynthetic process","type":"narrow"},{"name":"inhibition of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"inhibition of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"inhibition of siderophore formation","type":"exact"},{"name":"inhibition of siderophore synthesis","type":"exact"},{"name":"negative regulation of siderochrome biosynthesis","type":"narrow"},{"name":"negative regulation of siderochrome biosynthetic process","type":"narrow"},{"name":"negative regulation of siderophore anabolism","type":"exact"},{"name":"negative regulation of siderophore biosynthesis","type":"exact"},{"name":"negative regulation of siderophore biosynthetic process, peptide formation","type":"narrow"},{"name":"negative regulation of siderophore biosynthetic process, peptide modification","type":"narrow"},{"name":"negative regulation of siderophore formation","type":"exact"},{"name":"negative regulation of siderophore synthesis","type":"exact"}],"termid":"GO:1900705","terms_by_termid":{"GO:1905569":null}}


id: PBO:0062087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 18 pseudogene","termid":"PBO:0062087"}


id: GO:0097515
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized envelope lying outside the cell membrane of a spore derived from an asexual process. Examples of this process are found in bacterial and fungal species.","definition_xrefs":["GOC:cjm","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spore wall","termid":"GO:0031160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005618"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005618","GO:0005575"],"is_obsolete":false,"name":"asexual spore wall","termid":"GO:0097515"}


id: GO:0047826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-lysine = (2R,5S)-2,5-diaminohexanoate and (3S)-3,6-diaminohexanoate = (3S,5S)-3,5-diaminohexanoate.","definition_xrefs":["EC:5.4.3.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular aminotransferase activity","termid":"GO:0016869"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016853","GO:0003824"],"is_obsolete":false,"name":"D-lysine 5,6-aminomutase activity","secondary_identifiers":["KEGG_REACTION:R02852","MetaCyc:BETA-LYSINE-56-AMINOMUTASE-RXN"],"synonyms":[{"name":"adenosylcobalamin-dependent D-lysine 5,6-aminomutase activity","type":"related"},{"name":"lysine 5,6-aminomutase activity","type":"related"}],"termid":"GO:0047826"}


id: FYECO:0000439
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glycerophosphocholine was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glycerophosphocholine","secondary_identifiers":["PMID:38133430"],"termid":"FYECO:0000439"}


id: GO:1903304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of pyruvate kinase activity.","definition_xrefs":["GOC:TermGenie","GOC:mr","PMID:15804508","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of pyruvate kinase activity (obsolete GO:1903304)","synonyms":[{"name":"activation of ATP:pyruvate 2-O-phosphotransferase activity","type":"narrow"},{"name":"activation of phosphoenol transphosphorylase activity","type":"narrow"},{"name":"activation of phosphoenolpyruvate kinase activity","type":"narrow"},{"name":"activation of pyruvate kinase activity","type":"narrow"},{"name":"positive regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"positive regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"positive regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"up regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"up regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"up regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"up regulation of pyruvate kinase activity","type":"exact"},{"name":"up-regulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"up-regulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"up-regulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"up-regulation of pyruvate kinase activity","type":"exact"},{"name":"upregulation of ATP:pyruvate 2-O-phosphotransferase activity","type":"exact"},{"name":"upregulation of phosphoenol transphosphorylase activity","type":"exact"},{"name":"upregulation of phosphoenolpyruvate kinase activity","type":"exact"},{"name":"upregulation of pyruvate kinase activity","type":"exact"}],"termid":"GO:1903304"}


id: PBO:0062645
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 11 subfamily P member 1 pseudogene","termid":"PBO:0062645"}


id: MONDO:0021431
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that involves the buccal mucosa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cheek mucosa cancer","termid":"MONDO:0004645"},{"relation_name":"is_a","term_name":"oral cavity squamous cell carcinoma","termid":"MONDO:0004958"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"squamous cell carcinoma of buccal mucosa","secondary_identifiers":["SCTID:254437001","MEDGEN:83627","NCIT:C4040","UMLS:C0280299"],"synonyms":[{"name":"buccal mucosa squamous cell carcinoma","type":"exact"},{"name":"scc of buccal mucosa","type":"exact"},{"name":"scc of the buccal mucosa","type":"exact"},{"name":"squamous cell carcinoma of the buccal mucosa","type":"exact"}],"termid":"MONDO:0021431","xrefs":{"Monarch":{"xref_id":"0021431"}}}


id: PBO:0051117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1/OR15-2 (pseudogene)","termid":"PBO:0051117"}


id: MONDO:1011866
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"degenerative myeloencephalopathy, non-human animal","secondary_identifiers":["OMIA:001163"],"termid":"MONDO:1011866","xrefs":{"Monarch":{"xref_id":"1011866"}}}


id: PBO:0045292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dynamin 1 pseudogene 44","termid":"PBO:0045292"}


id: PBO:0082717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the p24 complex; role in misfolded protein quality control; binds to GPI anchor proteins and mediates their efficient transport from the ER to the Golgi; integral membrane protein that associates with endoplasmic reticulum-derived COPII-coated vesicles","termid":"PBO:0082717"}


id: PBO:0072580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRN3 pseudogene 3","termid":"PBO:0072580"}


id: FYPO:0006983
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the termination of RNA transcription RNA polymerase III from a DNA template is abnormal.","definition_xrefs":["GO:0006386","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal transcription termination","termid":"FYPO:0003556"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0006551","FYPO:0000294","FYPO:0005447"],"is_obsolete":false,"name":"abnormal termination of RNA polymerase III transcription","synonyms":[{"name":"abnormal RNA polymerase III transcription termination","type":"exact"},{"name":"abnormal termination of RNA polymerase III transcription during mitotic cell cycle","type":"related"},{"name":"abnormal termination of RNA polymerase III transcription during vegetative growth","type":"exact"},{"name":"abnormal transcription termination from Pol III promoter","type":"exact"},{"name":"abnormal transcription termination from RNA polymerase III promoter","type":"exact"}],"termid":"FYPO:0006983"}


id: MONDO:0013527
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any lissencephaly in which the cause of the disease is a mutation in the NDE1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microlissencephaly","termid":"MONDO:0015204"},{"relation_name":"is_a","term_name":"microcephaly with lissencephaly and/or hydranencephaly","termid":"MONDO:0700116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0700092"],"is_obsolete":false,"name":"lissencephaly 4","secondary_identifiers":["DOID:0112235","OMIM:614019","UMLS:C3151461","MEDGEN:462811"],"synonyms":[{"name":"LIS4","type":"related"},{"name":"NDE1 lissencephaly (disease)","type":"exact"},{"name":"lissencephaly (disease) caused by mutation in NDE1","type":"exact"},{"name":"lissencephaly 4","type":"exact"},{"name":"lissencephaly 4 (with microcephaly)","type":"exact"},{"name":"lissencephaly 4 with microcephaly","type":"related"},{"name":"lissencephaly 4, with microcephaly","type":"related"},{"name":"lissencephaly type 4","type":"exact"}],"termid":"MONDO:0013527","xrefs":{"Monarch":{"xref_id":"0013527"}}}


id: FYPO:0003486
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the region of a chromosome at which a DNA double-strand break has occurred is abolished.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to double-strand break site","termid":"FYPO:0002473"},{"relation_name":"is_a","term_name":"abolished protein localization to chromosome during vegetative growth","termid":"FYPO:0002841"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001985"],"is_obsolete":false,"name":"abolished protein localization to double-strand break site","synonyms":[{"name":"abolished protein localisation to double-strand break site","type":"exact"},{"name":"abolished protein localization to double-strand break site during mitotic cell cycle","type":"related"},{"name":"abolished protein localization to double-strand break site during vegetative growth","type":"exact"},{"name":"abolished protein localization to site of double-strand break","type":"exact"},{"name":"protein localization to double-strand break site abolished","type":"exact"}],"termid":"FYPO:0003486"}


id: MONDO:0012022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"orofacial cleft","termid":"MONDO:0000358"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orofacial cleft 4","secondary_identifiers":["UMLS:C1842143","MEDGEN:331228","OMIM:608371","DOID:0080398","MESH:C564251"],"synonyms":[{"name":"OFC4","type":"exact"},{"name":"cleft lip with or without cleft palate, nonsyndromic, 4","type":"related"},{"name":"orofacial cleft 4","type":"exact"}],"termid":"MONDO:0012022","xrefs":{"Monarch":{"xref_id":"0012022"}}}


id: FYPO:0003221
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone acetylation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal histone modification during vegetative growth","termid":"FYPO:0002600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal histone acetylation during vegetative growth","synonyms":[{"name":"normal histone acetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003221"}


id: MOD:00729
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"a protein modification that effectively replaces a hydrogen atom of an amino acid residue or of a modifying group with a pentose sugar group through a glycosidic bond","definition_xrefs":["DeltaMass:172"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycosylated residue","termid":"MOD:00693"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"pentosylated residue","synonyms":[{"name":"Pent","type":"exact"},{"name":"Pentoses (Ara, Rib, Xyl)","type":"exact"},{"name":"Pentosyl","type":"exact"}],"termid":"MOD:00729"}


id: MONDO:0011136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Quebec platelet syndrome (QPS) is a platelet granule disorder characterized by moderate to severe bleeding after trauma, surgery or obstetric interventions, frequent ecchymoses, mucocutaneous bleeding and muscle and joint bleeds.","definition_xrefs":["Orphanet:220436"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited bleeding disorder, platelet-type","termid":"MONDO:0000009"},{"relation_name":"is_a","term_name":"alpha granule disease","termid":"MONDO:0020117"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"Quebec platelet disorder","secondary_identifiers":["UMLS:C1866423","DOID:0111050","icd11.foundation:1618741944","MESH:C536260","MEDGEN:356528","GARD:8345","OMIM:601709"],"synonyms":[{"name":"BDPLT5","type":"exact"},{"name":"QPD","type":"related"},{"name":"Quebec platelet disorder","type":"exact"},{"name":"bleeding disorder, platelet-type, 5","type":"related"},{"name":"factor 5 Quebec","type":"related"},{"name":"factor V Quebec","type":"exact"},{"name":"platelet-type bleeding disorder 5","type":"exact"}],"termid":"MONDO:0011136","xrefs":{"Monarch":{"xref_id":"0011136"}}}


id: PBO:0051689
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"INMT-MINDY4 readthrough (NMD candidate)","termid":"PBO:0051689"}


id: MONDO:0006140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, extremely well differentiated cervical mucinous adenocarcinoma in which most of the neoplastic glands cannot be distinguished from the normal endocervical glands.","definition_xrefs":["NCIT:C40206"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical mucinous adenocarcinoma","termid":"MONDO:0002742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical mucinous adenocarcinoma, minimal deviation variant","secondary_identifiers":["MEDGEN:273125","DOID:6627","EFO:1000169","UMLS:C1516423"],"synonyms":[{"name":"cervical adenoma malignum","type":"exact"},{"name":"cervical mucinous adenocarcinoma, minimal deviation type","type":"exact"},{"name":"cervical mucinous adenocarcinoma, minimal deviation variant","type":"exact"}],"termid":"MONDO:0006140","xrefs":{"Monarch":{"xref_id":"0006140"}}}


id: MONDO:0010297
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any FG syndrome in which the cause of the disease is a mutation in the FLNA gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FG syndrome","termid":"MONDO:0002010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FG syndrome 2","secondary_identifiers":["MEDGEN:337461","OMIM:300321","UMLS:C1845902"],"synonyms":[{"name":"FG syndrome 2","type":"exact"},{"name":"FG syndrome caused by mutation in FLNA","type":"exact"},{"name":"FG syndrome type 2","type":"exact"},{"name":"FGS2","type":"related"},{"name":"FLNA FG syndrome","type":"exact"}],"termid":"MONDO:0010297","xrefs":{"Monarch":{"xref_id":"0010297"}}}


id: MONDO:0010390
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Ocular albinism with late-onset sensorineural deafness (OASD), is a rare, X-linked inherited type of ocular albinism described in one African kindred (7 males over 3 generations) to date, characterized by severe visual impairment, translucent pale-blue iridies, a reduction in the retinal pigment and moderately severe deafness by middle age (fourth to fifth decade of life). It is unclear whether it is allelic to X-linked recessive ocular albinism or a contiguous gene syndrome.","definition_xrefs":["Orphanet:1000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ocular albinism","termid":"MONDO:0017304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"ocular albinism with late-onset sensorineural deafness","secondary_identifiers":["GARD:592","MEDGEN:337149","OMIM:300650","SCTID:722054007","UMLS:C1845069"],"synonyms":[{"name":"OASD","type":"related"},{"name":"albinism ocular late onset sensorineural deafness","type":"related"},{"name":"albinism, ocular, with late-onset sensorineural deafness","type":"related"},{"name":"deafness and ocular albinism","type":"related"},{"name":"ocular albinism with sensorineural deafness","type":"related"}],"termid":"MONDO:0010390","xrefs":{"Monarch":{"xref_id":"0010390"}}}


id: PBO:0059437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane spanning 4-domains A6E","termid":"PBO:0059437"}


id: PBO:0086054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function, secreted when constitutively expressed; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the cell periphery, SWAT-GFP fusion also localizes to the extracellular region, and mCherry fusion also localizes to the vacuole; deletion mutants are viable and have elevated levels of Ty1 retrotransposition and Ty1 cDNA","termid":"PBO:0086054"}


id: GO:1990699
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of a hydrolase reaction that removes a palmitoleyl moiety, a 16-carbon monounsaturated fatty acid (C16:1), from some substrate.","definition_xrefs":["PMID:25731175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic ester hydrolase activity","termid":"GO:0052689"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016787","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"palmitoleyl hydrolase activity","termid":"GO:1990699"}


id: GO:0033949
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of terminal, non-reducing (2->6) linked beta-D-fructofuranose residues in fructans.","definition_xrefs":["EC:3.2.1.154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"fructan beta-(2,6)-fructosidase activity","secondary_identifiers":["MetaCyc:3.2.1.154-RXN"],"synonyms":[{"name":"6-FEH","type":"related"},{"name":"beta-(2,6)-D-fructan fructohydrolase activity","type":"related"},{"name":"beta-(2,6)-fructan exohydrolase activity","type":"related"}],"termid":"GO:0033949"}


id: GO:0007028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the cytoplasm. The cytoplasm is all of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.","definition_xrefs":["GOC:jl","GOC:dph","GOC:mah","GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cytoplasm organization","synonyms":[{"name":"cytoplasm organisation","type":"exact"},{"name":"cytoplasm organization and biogenesis","type":"related"}],"termid":"GO:0007028"}


id: MOD:01181
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-aspartic acid residue to L-aspartate 4-methyl ester.","definition_xrefs":["PubMed:1556110","PubMed:16888766","RESID:AA0435","Unimod:34#D","OMSSA:69","PubMed:9629898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"monomethylated L-aspartic acid","termid":"MOD:01681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-aspartic acid 4-methyl ester","synonyms":[{"name":"(2S)-2-amino-4-methoxy-4-oxobutanoic acid","type":"exact"},{"name":"2-aminobutanedioic acid 4-methyl ester","type":"exact"},{"name":"4-methyl L-2-aminosuccinic acid","type":"exact"},{"name":"4-methyl L-aspartate","type":"exact"},{"name":"4-methyl L-hydrogen aspartate","type":"exact"},{"name":"L-aspartic acid 4-methyl ester","type":"exact"},{"name":"Methyl","type":"related"},{"name":"O4MeAsp","type":"exact"},{"name":"aspartic acid 4-methyl ester","type":"exact"},{"name":"aspartic acid beta-methyl ester","type":"exact"},{"name":"meesterd","type":"exact"}],"termid":"MOD:01181"}


id: GO:0016560
data:
  {"annotated_genes":["SJAG_02693","SJAG_00891","SJAG_00702"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[63673,72635,75664],"is_not":false,"summary":null,"term":"GO:0016560"}]},"cv_name":"biological_process","definition":"The process in which a complex formed of a peroxisome targeting sequence (PTS) receptor bound to a PTS-bearing protein docks with translocation machinery in the peroxisomal membrane.","definition_xrefs":["PMID:14754507","PMID:11687502","PMID:11988772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"protein import into peroxisome matrix","termid":"GO:0016558"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_02693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0007031"}],"interesting_parent_ids":["GO:0006810","GO:0007031","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein import into peroxisome matrix, docking","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"synonyms":[{"name":"peroxisome matrix protein import, docking","type":"exact"},{"name":"peroxisome receptor docking","type":"related"},{"name":"protein docking during peroxisome matrix protein import","type":"exact"},{"name":"protein docking during protein import into peroxisome matrix","type":"exact"},{"name":"protein docking during protein transport into peroxisome matrix","type":"exact"},{"name":"protein transport into peroxisome matrix, docking","type":"exact"}],"termid":"GO:0016560","terms_by_termid":{"GO:0016560":null}}


id: PBO:0081913
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 880","termid":"PBO:0081913"}


id: MONDO:0020407
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"complete atrioventricular canal","termid":"MONDO:0015273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"complete atrioventricular canal-ventricle hypoplasia syndrome","secondary_identifiers":["GARD:16893","UMLS:C5680290","Orphanet:99067","MEDGEN:1842918"],"synonyms":[{"name":"CAVC type B","type":"exact"},{"name":"CAVC-ventricle hypoplasia syndrome","type":"exact"},{"name":"complete atrioventricular canal type B","type":"exact"}],"termid":"MONDO:0020407","xrefs":{"Monarch":{"xref_id":"0020407"}}}


id: GO:0048584
data:
  {"annotated_genes":["SJAG_01181","SJAG_06621","SJAG_00781","SJAG_03936","SJAG_00027","SJAG_03695","SJAG_02231","SJAG_00424","SJAG_00561","SJAG_01632","SJAG_02292","SJAG_01587","SJAG_00209","SJAG_03568","SJAG_02331","SJAG_03405","SJAG_02183","SJAG_00143","SJAG_01585","SJAG_03048","SJAG_01978","SJAG_02486","SJAG_04910","SJAG_02135","SJAG_04259","SJAG_03903","SJAG_01805","SJAG_06588","SJAG_02682","SJAG_05030","SJAG_02424","SJAG_01150","SJAG_01199","SJAG_00610","SJAG_01837","SJAG_00845","SJAG_06592","SJAG_02104","SJAG_03371","SJAG_04496","SJAG_03453","SJAG_04776","SJAG_05184","SJAG_03705","SJAG_01787","SJAG_04551","SJAG_03160","SJAG_06622","SJAG_02945","SJAG_00082","SJAG_00823","SJAG_02605","SJAG_03969","SJAG_02058","SJAG_00318","SJAG_04666","SJAG_03907","SJAG_03089","SJAG_03828","SJAG_04457","SJAG_03345","SJAG_00457"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113032,104163],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0050850"},{"annotations":[69627,91446,92777,94427,119971,90091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903139"},{"annotations":[71311,68346],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903833"},{"annotations":[91271,118450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900039"},{"annotations":[114093,119344],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045739"},{"annotations":[95895,112230],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000781"},{"annotations":[112978],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905168"},{"annotations":[109442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001034"},{"annotations":[115847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905326"},{"annotations":[118737],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090267"},{"annotations":[110983,114538,110979,120362,97271,110982,110981,110985,113874,110980,119438,110984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1900745"},{"annotations":[90150,116681,105717,117651,92856],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062038"},{"annotations":[89537,92012,112576,95819,104402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031031"},{"annotations":[62519,80367,115496,115497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000640"},{"annotations":[71131,74961],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032008"},{"annotations":[78394,90318,77347,77855,74486,96327,114918,112592,75952,98113,78729],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904263"},{"annotations":[99757,109027,93204],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904515"}]},"cv_name":"biological_process","definition":"Any process that activates, maintains or increases the rate of a response to a stimulus. Response to stimulus is a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a stimulus.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of biological process","termid":"GO:0048518"},{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"positively_regulates","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":62,"genes_by_uniquename":{"SJAG_00027":null,"SJAG_00082":null,"SJAG_00143":null,"SJAG_00209":null,"SJAG_00318":null,"SJAG_00424":null,"SJAG_00457":null,"SJAG_00561":null,"SJAG_00610":null,"SJAG_00781":null,"SJAG_00823":null,"SJAG_00845":null,"SJAG_01150":null,"SJAG_01181":null,"SJAG_01199":null,"SJAG_01585":null,"SJAG_01587":null,"SJAG_01632":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_01837":null,"SJAG_01978":null,"SJAG_02058":null,"SJAG_02104":null,"SJAG_02135":null,"SJAG_02183":null,"SJAG_02231":null,"SJAG_02292":null,"SJAG_02331":null,"SJAG_02424":null,"SJAG_02486":null,"SJAG_02605":null,"SJAG_02682":null,"SJAG_02945":null,"SJAG_03048":null,"SJAG_03089":null,"SJAG_03160":null,"SJAG_03345":null,"SJAG_03371":null,"SJAG_03405":null,"SJAG_03453":null,"SJAG_03568":null,"SJAG_03695":null,"SJAG_03705":null,"SJAG_03828":null,"SJAG_03903":null,"SJAG_03907":null,"SJAG_03936":null,"SJAG_03969":null,"SJAG_04259":null,"SJAG_04457":null,"SJAG_04496":null,"SJAG_04551":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_04910":null,"SJAG_05030":null,"SJAG_05184":null,"SJAG_06588":null,"SJAG_06592":null,"SJAG_06621":null,"SJAG_06622":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of response to stimulus","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"activation of response to stimulus","type":"narrow"},{"name":"stimulation of response to stimulus","type":"narrow"},{"name":"up regulation of response to stimulus","type":"exact"},{"name":"up-regulation of response to stimulus","type":"exact"},{"name":"upregulation of response to stimulus","type":"exact"}],"termid":"GO:0048584","terms_by_termid":{"GO:0031031":null,"GO:0032008":null,"GO:0045739":null,"GO:0050850":null,"GO:0062038":null,"GO:0090267":null,"GO:1900039":null,"GO:1900745":null,"GO:1903139":null,"GO:1903833":null,"GO:1904263":null,"GO:1904515":null,"GO:1905168":null,"GO:1905326":null,"GO:2000640":null,"GO:2000781":null,"GO:2001034":null}}


id: PBO:0062827
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidative stress induced growth inhibitor family member 2","termid":"PBO:0062827"}


id: PBO:0049019
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 1","termid":"PBO:0049019"}


id: PBO:0085007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Negative regulator of the glucose-sensing signal transduction pathway; required for repression of transcription by Rgt1p; interacts with Rgt1p and the Snf3p and Rgt2p glucose sensors; phosphorylated by Yck1p, triggering Mth1p degradation; MTH1 has a paralog, STD1, that arose from the whole genome duplication","termid":"PBO:0085007"}


id: GO:0160123
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of nuclear lamina.","definition_xrefs":["PMID:31434876","PMID:2824113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005198"}],"interesting_parent_ids":["GO:0003674","GO:0005198"],"is_obsolete":false,"name":"structural constituent of nuclear lamina","termid":"GO:0160123"}


id: PBO:0087437
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit E of the V1 domain of the vacuolar H+-ATPase (V-ATPase); V-ATPase is an electrogenic proton pump found throughout the endomembrane system; V1 domain has eight subunits; required for the V1 domain to assemble onto the vacuolar membrane; protein abundance increases in response to DNA replication stress","termid":"PBO:0087437"}


id: PBO:0083451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene CPR6","termid":"PBO:0083451"}


id: GO:1903883
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of interleukin-17-mediated signaling pathway.","definition_xrefs":["GOC:krc","PMID:20054338","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine-mediated signaling pathway","termid":"GO:0001961"},{"relation_name":"is_a","term_name":"regulation of interleukin-17-mediated signaling pathway","termid":"GO:1903881"},{"relation_name":"positively_regulates","term_name":"interleukin-17-mediated signaling pathway","termid":"GO:0097400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of interleukin-17-mediated signaling pathway","synonyms":[{"name":"activation of IL-17-mediated signaling pathway","type":"narrow"},{"name":"activation of IL-17-mediated signalling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signaling pathway","type":"narrow"},{"name":"activation of interleukin-17-mediated signalling pathway","type":"narrow"},{"name":"positive regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"positive regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"positive regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"up-regulation of interleukin-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of IL-17-mediated signalling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signaling pathway","type":"exact"},{"name":"upregulation of interleukin-17-mediated signalling pathway","type":"exact"}],"termid":"GO:1903883"}


id: MONDO:0012510
data:
  {"annotated_genes":["SJAG_02324"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87957],"is_not":false,"summary":null,"term":"MONDO:0012510"}]},"cv_name":"mondo","definition":"Combined oxidative phosphorylation defect type 2 is a rare mitochondrial disorder due to a defect in mitochondrial protein synthesis characterized by severe intrauterine growth retardation, neonatal limb edema and redundant skin on the neck (hydrops), developmental brain defects (corpus callosum agenesis, ventriculomegaly), brachydactyly, dysmorphic facial features with low set ears, severe intractable neonatal lactic acidosis with lethargy, hypotonia, absent spontaneous movements and fatal outcome. Markedly decreased activity of complex I, II + III and IV in muscle and liver have been determined.","definition_xrefs":["Orphanet:254920"],"direct_ancestors":[{"relation_name":"is_a","term_name":"combined oxidative phosphorylation deficiency","termid":"MONDO:0000732"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02324":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation defect type 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["GARD:17232","MESH:C566468","OMIM:610498","UMLS:C1864843","SCTID:764943000","MEDGEN:400626","DOID:0111483"],"synonyms":[{"name":"COXPD2","type":"exact"},{"name":"MRPS16 combined oxidative phosphorylation deficiency","type":"exact"},{"name":"combined oxidative phosphorylation deficiency 2","type":"related"},{"name":"combined oxidative phosphorylation deficiency caused by mutation in MRPS16","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 2","type":"exact"},{"name":"corpus callosum, agenesis of, with Dysmorphism and fatal lactic acidosis","type":"related"}],"termid":"MONDO:0012510","terms_by_termid":{"MONDO:0012510":null},"xrefs":{"Monarch":{"xref_id":"0012510"}}}


id: PBO:0042875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 141","termid":"PBO:0042875"}


id: MONDO:0020570
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Brill-Zinsser disease (obsolete MONDO:0020570)","termid":"MONDO:0020570","xrefs":{"Monarch":{"xref_id":"0020570"}}}


id: PBO:0054159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1526","termid":"PBO:0054159"}


id: GO:0036461
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a BLOC-2 complex, a protein complex required for the biogenesis of specialized organelles of the endosomal-lysosomal system, such as melanosomes and platelet dense granules.","definition_xrefs":["GOC:bf","GOC:PARL","PMID:22511774"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"BLOC-2 complex binding","termid":"GO:0036461"}


id: PBO:0003977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA snR5","termid":"PBO:0003977"}


id: PBO:0040672
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B cell receptor associated protein 31","termid":"PBO:0040672"}


id: PBO:0042366
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD164 molecule","termid":"PBO:0042366"}


id: PBO:0077764
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOMM22 divergent transcript","termid":"PBO:0077764"}


id: GO:0080093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency or extent of photorespiration. Photorespiration is a light-dependent catabolic process occurring concomitantly with photosynthesis in plants (especially C3 plants) whereby dioxygen (O2) is consumed and carbon dioxide (CO2) is evolved.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biosynthetic process","termid":"GO:0009889"},{"relation_name":"regulates","term_name":"photorespiration","termid":"GO:0009853"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photorespiration","termid":"GO:0080093"}


id: PBO:0050429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HNRNPK antisense RNA 1","termid":"PBO:0050429"}


id: GO:0035757
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to chemokine (C-C motif) ligand 19.","definition_xrefs":["GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C-C chemokine binding","termid":"GO:0019957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"chemokine (C-C motif) ligand 19 binding","synonyms":[{"name":"CCL19 binding","type":"exact"}],"termid":"GO:0035757"}


id: MONDO:0016406
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete other metabolic disease with epilepsy (obsolete MONDO:0016406)","secondary_identifiers":["Orphanet:225713"],"termid":"MONDO:0016406","xrefs":{"Monarch":{"xref_id":"0016406"}}}


id: PBO:0081248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 19","termid":"PBO:0081248"}


id: PBO:0042116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 188","termid":"PBO:0042116"}


id: RO:0002218
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"x has participant y if and only if x realizes some active role that inheres in y","direct_ancestors":[{"relation_name":"is_a","term_name":"has_participant","termid":"RO:0000057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_active_participant","termid":"RO:0002218"}


id: GO:0047651
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: bromochloromethane + H2O = bromide + chloride + formaldehyde + 2 H+.","definition_xrefs":["RHEA:13765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on acid halide bonds, in C-halide compounds","termid":"GO:0019120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"alkylhalidase activity","secondary_identifiers":["KEGG_REACTION:R03523"],"synonyms":[{"name":"alkyl-halide halidohydrolase activity","type":"related"},{"name":"haloalkane halidohydrolase activity","type":"related"},{"name":"halogenase activity","type":"related"}],"termid":"GO:0047651"}


id: MONDO:0019867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 8 is a chromosomal disorder defined by the presence of three copies of chromosome 8 in some cells of the organism. It is characterized by facial dysmorphism, mild intellectual deficit and joint, urinary, cardiac and skeletal anomalies.","definition_xrefs":["Orphanet:96061"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 8, trisomy","termid":"MONDO:0043452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 8","secondary_identifiers":["UMLS:C1096527","MedDRA:10053916","MESH:C537940","GARD:5359","MEDGEN:797340","SCTID:717335009"],"synonyms":[{"name":"Mosaic trisomy chromosome 8","type":"related"},{"name":"Mosaic trisomy type 8","type":"exact"},{"name":"Warkany syndrome","type":"exact"},{"name":"trisomy 8 mosaicism","type":"related"}],"termid":"MONDO:0019867","xrefs":{"Monarch":{"xref_id":"0019867"}}}


id: GO:1900711
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of tensidol B biosynthetic process.","definition_xrefs":["GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of amide metabolic process","termid":"GO:0034249"},{"relation_name":"is_a","term_name":"negative regulation of small molecule metabolic process","termid":"GO:0062014"},{"relation_name":"is_a","term_name":"negative regulation of secondary metabolite biosynthetic process","termid":"GO:1900377"},{"relation_name":"is_a","term_name":"regulation of tensidol B biosynthetic process","termid":"GO:1900710"},{"relation_name":"negatively_regulates","term_name":"tensidol B biosynthetic process","termid":"GO:1900608"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"negatively_regulates","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0008150","GO:0019748","GO:0044281"],"is_obsolete":false,"name":"negative regulation of tensidol B biosynthetic process","synonyms":[{"name":"down regulation of tensidol B anabolism","type":"exact"},{"name":"down regulation of tensidol B biosynthesis","type":"exact"},{"name":"down regulation of tensidol B biosynthetic process","type":"exact"},{"name":"down regulation of tensidol B formation","type":"exact"},{"name":"down regulation of tensidol B synthesis","type":"exact"},{"name":"down-regulation of tensidol B anabolism","type":"exact"},{"name":"down-regulation of tensidol B biosynthesis","type":"exact"},{"name":"down-regulation of tensidol B biosynthetic process","type":"exact"},{"name":"down-regulation of tensidol B formation","type":"exact"},{"name":"down-regulation of tensidol B synthesis","type":"exact"},{"name":"downregulation of tensidol B anabolism","type":"exact"},{"name":"downregulation of tensidol B biosynthesis","type":"exact"},{"name":"downregulation of tensidol B biosynthetic process","type":"exact"},{"name":"downregulation of tensidol B formation","type":"exact"},{"name":"downregulation of tensidol B synthesis","type":"exact"},{"name":"inhibition of tensidol B anabolism","type":"exact"},{"name":"inhibition of tensidol B biosynthesis","type":"exact"},{"name":"inhibition of tensidol B biosynthetic process","type":"narrow"},{"name":"inhibition of tensidol B formation","type":"exact"},{"name":"inhibition of tensidol B synthesis","type":"exact"},{"name":"negative regulation of tensidol B anabolism","type":"exact"},{"name":"negative regulation of tensidol B biosynthesis","type":"exact"},{"name":"negative regulation of tensidol B formation","type":"exact"},{"name":"negative regulation of tensidol B synthesis","type":"exact"}],"termid":"GO:1900711"}


id: GO:0071430
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a ribonucleoprotein complex that contains pre-microRNA from the nucleus to the cytoplasm.","definition_xrefs":["GOC:mah","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete pre-miRNA-containing ribonucleoprotein complex export from nucleus (obsolete GO:0071430)","synonyms":[{"name":"pre-microRNA-containing RNP export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from cell nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex export from nucleus","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex nucleus export","type":"exact"},{"name":"pre-microRNA-containing ribonucleoprotein complex transport from nucleus to cytoplasm","type":"exact"}],"termid":"GO:0071430"}


id: PBO:0085916
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; member of a flavodoxin-like fold protein family that includes Pst2p and Ycp4p; green fluorescent protein (GFP)-fusion protein localizes to the cytoplasm in a punctate pattern; RFS1 has a paralog, PST2, that arose from the whole genome duplication","termid":"PBO:0085916"}


id: MONDO:0013173
data:
  {"annotated_genes":["SJAG_04358"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88469],"is_not":false,"summary":null,"term":"MONDO:0013173"}]},"cv_name":"mondo","definition":"Any autosomal recessive non-syndromic intellectual disability in which the cause of the disease is a mutation in the TRAPPC9 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive non-syndromic intellectual disability","termid":"MONDO:0019502"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04358":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066","MONDO:0006025"],"is_obsolete":false,"name":"intellectual disability, autosomal recessive 13","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2750791","MEDGEN:442564","DOID:0081098","GARD:22548","OMIM:613192","MESH:C567714"],"synonyms":[{"name":"MRT13","type":"related"},{"name":"TRAPPC9 autosomal recessive non-syndromic intellectual disability","type":"exact"},{"name":"autosomal recessive non-syndromic intellectual disability caused by mutation in TRAPPC9","type":"exact"},{"name":"intellectual disability, autosomal recessive 13","type":"exact"},{"name":"intellectual disability, autosomal recessive type 13","type":"exact"},{"name":"mental retardation, autosomal recessive 13","type":"related"},{"name":"mental retardation, autosomal recessive type 13","type":"exact"}],"termid":"MONDO:0013173","terms_by_termid":{"MONDO:0013173":null},"xrefs":{"Monarch":{"xref_id":"0013173"}}}


id: PBO:0015705
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial acylglycerol lipase (predicted)","termid":"PBO:0015705"}


id: GO:1901937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of beta-caryophyllene.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpene biosynthetic process","termid":"GO:0051762"},{"relation_name":"is_a","term_name":"beta-caryophyllene metabolic process","termid":"GO:1901935"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"beta-caryophyllene biosynthetic process","synonyms":[{"name":"beta-caryophyllene anabolism","type":"exact"},{"name":"beta-caryophyllene biosynthesis","type":"exact"},{"name":"beta-caryophyllene formation","type":"exact"},{"name":"beta-caryophyllene synthesis","type":"exact"}],"termid":"GO:1901937"}


id: GO:0043708
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a cell to a solid substrate, via cell adhesion molecules, contributing to the formation of a biofilm.","definition_xrefs":["GOC:jl","GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-substrate adhesion","termid":"GO:0031589"},{"relation_name":"part_of","term_name":"submerged biofilm formation","termid":"GO:0090605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cell adhesion involved in biofilm formation","synonyms":[{"name":"cell adhesion during biofilm formation","type":"related"}],"termid":"GO:0043708"}


id: GO:0099060
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic specialization membrane consisting of the gene products and protein complexes having at least some part of their peptide sequence embedded in the hydrophobic region of the membrane.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete integral component of postsynaptic specialization membrane (obsolete GO:0099060)","termid":"GO:0099060"}


id: MONDO:1012920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hernia of the linea alba that occurs in cattle due to a mutation in the TWIST1 gene.","definition_xrefs":["PMID:35187669"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abdominal hernia, TWIST1-related, cattle","secondary_identifiers":["OMIA:002532-9913"],"termid":"MONDO:1012920","xrefs":{"Monarch":{"xref_id":"1012920"}}}


id: GO:0052317
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving camalexin, an indole phytoalexin.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur compound metabolic process","termid":"GO:0006790"},{"relation_name":"is_a","term_name":"indole phytoalexin metabolic process","termid":"GO:0046217"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006790"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0006790","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"camalexin metabolic process","synonyms":[{"name":"camalexin metabolism","type":"exact"}],"termid":"GO:0052317"}


id: PBO:0086261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that regulates phospholipid asymmetry at plasma membrane; may act to generate normal levels of PI4P; may act together with or upstream of Stt4p; at least partially mediates proper localization of Stt4p to the plasma membrane","termid":"PBO:0086261"}


id: RO:0002595
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a material entity and a process in which causality is involved, with either the material entity or some part of the material entity exerting some influence over the process, or the process influencing some aspect of the material entity.","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entity_and_a_process","termid":"RO:0002595"}


id: PBO:0004351
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein","termid":"PBO:0004351"}


id: GO:0042719
data:
  {"annotated_genes":["SJAG_02524","SJAG_01949","SJAG_00687","SJAG_04208"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58725,90663,94795,118326],"is_not":false,"summary":null,"term":"GO:0042719"}]},"cv_name":"cellular_component","definition":"mitochondrial protein-containing complex localised in the mitochondrial inner membrane space that chaperones proteins to the TIM22 complex for insertion into the mitochondrial inner membrane.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"},{"relation_name":"part_of","term_name":"mitochondrial intermembrane space","termid":"GO:0005758"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00687":null,"SJAG_01949":null,"SJAG_02524":null,"SJAG_04208":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005739","GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"mitochondrial intermembrane space chaperone complex","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"Tim8-Tim13 complex","type":"narrow"},{"name":"Tim9-Tim10 complex","type":"narrow"},{"name":"mitochondrial intermembrane space protein transporter complex","type":"related"},{"name":"small TIM complex","type":"exact"}],"termid":"GO:0042719","terms_by_termid":{"GO:0042719":null}}


id: GO:0033870
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3'-phosphoadenylyl sulfate + a thiol = adenosine 3',5'-bisphosphate + an S-alkyl thiosulfate.","definition_xrefs":["EC:2.8.2.16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfotransferase activity","termid":"GO:0008146"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016782"}],"interesting_parent_ids":["GO:0003674","GO:0016782","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"thiol sulfotransferase activity","secondary_identifiers":["MetaCyc:THIOL-SULFOTRANSFERASE-RXN","RHEA:14637"],"synonyms":[{"name":"3'-phosphoadenylyl-sulfate:thiol S-sulfotransferase activity","type":"related"},{"name":"PAPS sulfotransferase activity","type":"broad"},{"name":"adenosine 3'-phosphate 5'-sulphatophosphate sulfotransferase activity","type":"related"}],"termid":"GO:0033870"}


id: GO:0031262
data:
  {"annotated_genes":["SJAG_04076","SJAG_00794","SJAG_03683","SJAG_02814"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[76847,77668,77830,79093],"is_not":false,"summary":null,"term":"GO:0031262"}]},"cv_name":"cellular_component","definition":"An essential outer kinetochore complex involved in the attachment of microtubule ends to the chromosomes during mitosis.","definition_xrefs":["PMID:34810257","GOC:vw","PMID:28502666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"outer kinetochore","termid":"GO:0000940"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00794":null,"SJAG_02814":null,"SJAG_03683":null,"SJAG_04076":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005694"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0000776"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005694","GO:0032991","GO:0000776","GO:0005575"],"is_obsolete":false,"name":"Ndc80 complex","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"Nuf2-Ndc80 complex","type":"exact"}],"termid":"GO:0031262","terms_by_termid":{"GO:0031262":null}}


id: PBO:0085376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"[PIN(+)] prion; an infectious protein conformation that is generally an ordered protein aggregate","termid":"PBO:0085376"}


id: PBO:0003491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Swi5 protein","termid":"PBO:0003491"}


id: PBO:0052227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"potassium channel tetramerization domain containing 5","termid":"PBO:0052227"}


id: GO:0001714
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process that results in a cell becoming capable of differentiating autonomously into an endoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"part_of","term_name":"endodermal cell fate commitment","termid":"GO:0001711"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"endodermal cell fate specification","synonyms":[{"name":"endoderm cell fate specification","type":"exact"}],"termid":"GO:0001714"}


id: GO:0015327
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: cystine(out) + glutamate(in) = cystine(in) + glutamate(out).","definition_xrefs":["TC:2.A.3.8.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur amino acid transmembrane transporter activity","termid":"GO:0000099"},{"relation_name":"is_a","term_name":"L-glutamate transmembrane transporter activity","termid":"GO:0005313"},{"relation_name":"is_a","term_name":"antiporter activity","termid":"GO:0015297"},{"relation_name":"is_a","term_name":"modified amino acid transmembrane transporter activity","termid":"GO:0072349"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0005215","GO:0003674"],"is_obsolete":false,"name":"cystine:glutamate antiporter activity","termid":"GO:0015327"}


id: PBO:0056816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"major facilitator superfamily domain containing 9","termid":"PBO:0056816"}


id: GO:0015169
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of glycerol-3-phosphate from one side of a membrane to the other. Glycerol-3-phosphate is a phosphoric monoester of glycerol.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic anion transmembrane transporter activity","termid":"GO:0008514"},{"relation_name":"is_a","term_name":"organophosphate ester transmembrane transporter activity","termid":"GO:0015605"},{"relation_name":"is_a","term_name":"carbohydrate derivative transmembrane transporter activity","termid":"GO:1901505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"glycerol-3-phosphate transmembrane transporter activity","termid":"GO:0015169"}


id: MONDO:0020081
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete macrophage or histiocytic tumor (obsolete MONDO:0020081)","secondary_identifiers":["Orphanet:98288"],"termid":"MONDO:0020081","xrefs":{"Monarch":{"xref_id":"0020081"}}}


id: PR:O14065
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC962.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14065"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C962.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC962.01","synonyms":[{"name":"Spom972h-SPCC962.01","type":"exact"}],"termid":"PR:O14065"}


id: PBO:0060033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND4 pseudogene 21","termid":"PBO:0060033"}


id: PBO:0048723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycosyltransferase 1 domain containing 1","termid":"PBO:0048723"}


id: FYPO:0003393
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A metabolism phenotype observed in the vegetative growth phase of the life cycle in which electron transport involved in cellular respiration is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular respiration","termid":"FYPO:0000078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"abnormal respiratory electron transport","synonyms":[{"name":"abnormal respiratory electron transport chain","type":"exact"},{"name":"abnormal respiratory electron transport during mitotic cell cycle","type":"related"},{"name":"abnormal respiratory electron transport process during vegetative growth","type":"exact"}],"termid":"FYPO:0003393"}


id: GO:0046383
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTDP-rhamnose, a substance composed of rhamnose in glycosidic linkage with deoxyribosylthymine diphosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-sugar metabolic process","termid":"GO:0009225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"dTDP-rhamnose metabolic process","synonyms":[{"name":"dTDP-rhamnose metabolism","type":"exact"}],"termid":"GO:0046383"}


id: PBO:0090653
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial elongation factor GTPase Guf1","termid":"PBO:0090653"}


id: GO:0047609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: N-acetylputrescine + H2O = acetate + putrescine.","definition_xrefs":["EC:3.5.1.62","RHEA:23412"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"},{"relation_name":"is_a","term_name":"deacetylase activity","termid":"GO:0019213"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0019213"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016810","GO:0003674","GO:0016787","GO:0019213"],"is_obsolete":false,"name":"acetylputrescine deacetylase activity","secondary_identifiers":["MetaCyc:ACETYLPUTRESCINE-DEACETYLASE-RXN","KEGG_REACTION:R01156"],"synonyms":[{"name":"N-acetylputrescine acetylhydrolase activity","type":"related"}],"termid":"GO:0047609"}


id: GO:0005641
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The region between the two lipid bilayers of the nuclear envelope; 20-40 nm wide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle envelope lumen","termid":"GO:0031970"},{"relation_name":"part_of","term_name":"nuclear envelope","termid":"GO:0005635"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634"],"is_obsolete":false,"name":"nuclear envelope lumen","secondary_identifiers":["GO:0005653"],"synonyms":[{"name":"nuclear intermembrane space","type":"exact"},{"name":"nuclear membrane lumen","type":"related"},{"name":"perinuclear space","type":"exact"}],"termid":"GO:0005641"}


id: GO:0098768
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The meiotic cell cycle phase in eukaryotes between meiotic prophase I and meiotic metaphase I. During meiotic prometaphase I, the nuclear envelope breaks down and one kinetochore forms per chromosome. Chromosomes attach to spindle microtubules and begin to move towards the metaphase plate.","definition_xrefs":["PMID:16012859"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiosis I cell cycle phase","termid":"GO:0098764"},{"relation_name":"part_of","term_name":"meiotic M phase","termid":"GO:0051327"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0051327"}],"interesting_parent_ids":["GO:0008150","GO:0051327"],"is_obsolete":false,"name":"meiotic prometaphase I","termid":"GO:0098768"}


id: GO:0047680
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: anilide + H2O = a carboxylate + aniline + H+.","definition_xrefs":["RHEA:20297","EC:3.5.1.13"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016810"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0016810","GO:0003674"],"is_obsolete":false,"name":"aryl-acylamidase activity","secondary_identifiers":["KEGG_REACTION:R01862","MetaCyc:ARYL-ACYLAMIDASE-RXN"],"synonyms":[{"name":"AAA-1","type":"related"},{"name":"AAA-2","type":"related"},{"name":"aryl-acylamide amidohydrolase activity","type":"related"},{"name":"brain acetylcholinesterase (is associated with AAA-2)","type":"related"},{"name":"pseudocholinesterase (associated with arylacylamidase)","type":"related"}],"termid":"GO:0047680"}


id: PBO:0087491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of DNA pol epsilon and of ISW2 chromatin accessibility complex; involved in both chromosomal DNA replication and inheritance of telomeric silencing; stabilizes the interaction of Pol epsilon with primer-template DNA, positively affecting the processivity of the polymerase and exonuclease activities of Pol epsilon; interacts with extranucleosomal DNA and acts as anchor point for ISW2 complex that retains its position on DNA during nucleosome mobilization","termid":"PBO:0087491"}


id: GO:0030712
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of border cell delamination.","definition_xrefs":["PMID:10822261"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cell-cell adhesion","termid":"GO:0022409"},{"relation_name":"is_a","term_name":"regulation of border follicle cell delamination","termid":"GO:0030710"},{"relation_name":"is_a","term_name":"negative regulation of biological process","termid":"GO:0048519"},{"relation_name":"negatively_regulates","term_name":"border follicle cell delamination","termid":"GO:0030709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"negative regulation of border follicle cell delamination","synonyms":[{"name":"down regulation of border follicle cell delamination","type":"exact"},{"name":"down-regulation of border follicle cell delamination","type":"exact"},{"name":"downregulation of border follicle cell delamination","type":"exact"},{"name":"inhibition of border follicle cell delamination","type":"narrow"},{"name":"negative regulation of border cell delamination","type":"broad"}],"termid":"GO:0030712"}


id: MONDO:0009472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetylation, slow","secondary_identifiers":["MEDGEN:164207","OMIM:243400","UMLS:C0878587"],"synonyms":[{"name":"Fast acetylator phenotype","type":"related"},{"name":"INH inactivation, Fast","type":"related"},{"name":"INH inactivation, slow","type":"related"},{"name":"Isoniazid inactivation, slow","type":"related"},{"name":"acetylation, Fast","type":"related"},{"name":"acetylation, slow","type":"exact"},{"name":"slow acetylator phenotype","type":"related"}],"termid":"MONDO:0009472","xrefs":{"Monarch":{"xref_id":"0009472"}}}


id: GO:0046132
data:
  {"annotated_genes":["SJAG_00694"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75277],"is_not":false,"summary":null,"term":"GO:0046132"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of any ribonucleoside, a nucleoside in which a pyrimidine base is linked to a ribose (beta-D-ribofuranose) molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoside biosynthetic process","termid":"GO:0042455"},{"relation_name":"is_a","term_name":"pyrimidine ribonucleoside metabolic process","termid":"GO:0046131"},{"relation_name":"is_a","term_name":"pyrimidine nucleoside biosynthetic process","termid":"GO:0046134"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0055086"],"is_obsolete":false,"name":"pyrimidine ribonucleoside biosynthetic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"pyrimidine ribonucleoside anabolism","type":"exact"},{"name":"pyrimidine ribonucleoside biosynthesis","type":"exact"},{"name":"pyrimidine ribonucleoside formation","type":"exact"},{"name":"pyrimidine ribonucleoside synthesis","type":"exact"}],"termid":"GO:0046132","terms_by_termid":{"GO:0046132":null}}


id: GO:0061084
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the rate, frequency, or extent of protein refolding. Protein refolding is the process carried out by a cell that restores the biological activity of an unfolded or misfolded protein, using helper proteins such as chaperones.","definition_xrefs":["GOC:dph","GOC:tb","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein refolding","termid":"GO:0061083"},{"relation_name":"is_a","term_name":"negative regulation of protein folding","termid":"GO:1903333"},{"relation_name":"negatively_regulates","term_name":"protein refolding","termid":"GO:0042026"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006457"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006457"}],"interesting_parent_ids":["GO:0006457","GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein refolding","termid":"GO:0061084"}


id: PR:O60016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- clr4 gene.","definition_xrefs":["UniProtKB:O60016","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone-lysine N-methyltransferase, H3 lysine-9 specific (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC428.08c","synonyms":[{"name":"H3-K9-HMTase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-clr4","type":"exact"},{"name":"cryptic loci regulator 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"histone H3-K9 methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lysine N-methyltransferase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60016"}


id: PBO:0000714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-1,3-beta-glucanase Eng1","termid":"PBO:0000714"}


id: PR:000028951
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A peroxiredoxin tpx1 complex in Schizosaccharomyces pombe.","definition_xrefs":["PRO:CNA","PMID:22245228"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peroxiredoxin tpx1","termid":"PR:000028932"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tpx1/HyperOx(C48) dimer","synonyms":[{"name":"PomBase_original_PRO_term_name: peroxiredoxin tpx1 complex (Schizosaccharomyces pombe)","type":"exact"},{"name":"tpx1/HyperOx(C48) dimer","type":"exact"}],"termid":"PR:000028951"}


id: PBO:0062148
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily F member 21","termid":"PBO:0062148"}


id: SO:1000040
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A tandem duplication where the individual regions are not in the same orientation.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tandem_duplication","termid":"SO:1000173"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inverted_tandem_duplication","synonyms":[{"name":"inverted tandem duplication","type":"exact"},{"name":"mirror duplication","type":"related"}],"termid":"SO:1000040"}


id: GO:0030631
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The incorporation of pyrrolysine, also known as lysine methylamine methyltransferase cofactor adduct, into a peptide; uses a special tRNA that recognizes the UAG codon as a modified lysine, rather than as a termination codon. Pyrrolysine may be synthesized as a free amino acid or synthesized from a lysine charged tRNA before its incorporation; it is not a posttranslational modification of peptidyl-lysine; this modification is found in several Methanosarcina methylamine methyltransferases.","definition_xrefs":["PMID:17204561","RESID:AA0321","PMID:11435424"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translational readthrough","termid":"GO:0006451"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"pyrrolysine incorporation","synonyms":[{"name":"lysine methylamine methyltransferase cofactor adduct incorporation","type":"exact"},{"name":"monomethylamine methyltransferase cofactor lysine adduct incorporation","type":"exact"}],"termid":"GO:0030631"}


id: GO:0045915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving catecholamine.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of catecholamine metabolic process","termid":"GO:0042069"},{"relation_name":"positively_regulates","term_name":"catecholamine metabolic process","termid":"GO:0006584"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of catecholamine metabolic process","synonyms":[{"name":"activation of catecholamine metabolic process","type":"narrow"},{"name":"positive regulation of catecholamine metabolism","type":"exact"},{"name":"stimulation of catecholamine metabolic process","type":"narrow"},{"name":"up regulation of catecholamine metabolic process","type":"exact"},{"name":"up-regulation of catecholamine metabolic process","type":"exact"},{"name":"upregulation of catecholamine metabolic process","type":"exact"}],"termid":"GO:0045915"}


id: GO:0035483
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the liquid and liquid-suspended solid contents of the stomach exit through the pylorus into the duodenum.","definition_xrefs":["ISBN:9781416032458","GOC:cy"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastric motility","termid":"GO:0035482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"gastric emptying","termid":"GO:0035483"}


id: PATO:0000202
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000202 long term memory (obsolete PATO:0000202)","termid":"PATO:0000202"}


id: MONDO:0032568
data:
  {"annotated_genes":["SJAG_02878","SJAG_00845"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88356,88357],"is_not":false,"summary":null,"term":"MONDO:0032568"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00845":null,"SJAG_02878":null},"genotype_count":0,"is_obsolete":false,"name":"intellectual developmental disorder with macrocephaly, seizures, and speech delay","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1648339","OMIM:618158","UMLS:C4748428"],"synonyms":[{"name":"IDDMSSD","type":"related"},{"name":"INTELLECTUAL DEVELOPMENTAL DISORDER WITH MACROCEPHALY, SEIZURES, AND SPEECH DELAY","type":"related"}],"termid":"MONDO:0032568","terms_by_termid":{"MONDO:0032568":null},"xrefs":{"Monarch":{"xref_id":"0032568"}}}


id: PBO:0002964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNF2 family helicase Ino80","termid":"PBO:0002964"}


id: FYPO:0008381
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"},"SJAG_03892:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03892","name":"vps4delta","uniquename":"SJAG_03892:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121319],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007770"},{"annotations":[121222,121218,121220,121219],"is_not":false,"rel_names":["output_of"],"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype that affects the localization of a  specific region of a chromosome in a cell in the vegetative growth phase of the life cycle.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"localization phenotype during vegetative growth","termid":"FYPO:0001337"},{"relation_name":"is_a","term_name":"chromosome region localization phenotype","termid":"FYPO:0008383"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null,"SJAG_03892":null},"genotype_count":5,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]},"vps4delta":{"display_name":"vps4delta","display_uniquename":"vps4delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03892:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0000138"],"is_obsolete":false,"name":"chromosome region localization phenotype during vegetative growth","references_by_uniquename":{"PMID:24184107":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01834","SJAG_03449","SJAG_03892"],"single_locus_genotype_uniquenames":["man1delta","vps4delta","man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pom152delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type"],"termid":"FYPO:0008381","terms_by_termid":{"FYPO:0004890":null,"FYPO:0007770":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: PBO:0051033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IGF like family member 2","termid":"PBO:0051033"}


id: PBO:0059839
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MTFR2 pseudogene 1","termid":"PBO:0059839"}


id: MONDO:0024892
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A soft tissue neoplasm composed of acellular amyloid material.","definition_xrefs":["NCIT:C8323"],"direct_ancestors":[{"relation_name":"is_a","term_name":"soft tissue neoplasm","termid":"MONDO:0006424"},{"relation_name":"is_a","term_name":"amyloidosis","termid":"MONDO:0019065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0021179"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021179","MONDO:0005066"],"is_obsolete":false,"name":"soft tissue amyloid neoplasm","secondary_identifiers":["ICD9:714.32","DOID:6755"],"synonyms":[{"name":"amyloid neoplasm","type":"exact"},{"name":"amyloid tumor","type":"related"},{"name":"amyloid tumor (morphologic abnormality)","type":"exact"},{"name":"amyloid tumour","type":"related"},{"name":"amyloid tumour (morphologic abnormality)","type":"exact"},{"name":"soft tissue amyloid neoplasm","type":"exact"},{"name":"soft tissue amyloid tumor","type":"exact"},{"name":"soft tissue amyloid tumour","type":"exact"}],"termid":"MONDO:0024892","xrefs":{"Monarch":{"xref_id":"0024892"}}}


id: PBO:0027106
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_termination_of_RNA_polymerase_II_transcription","termid":"PBO:0027106"}


id: PBO:0074299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secreted LY6/PLAUR domain containing 2","termid":"PBO:0074299"}


id: FYPO:0003087
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) in a mutant is normal (i.e. indistinguishable from wild type) at a replication fork barrier in the mating-type region.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal chromatin binding","termid":"FYPO:0003086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal chromatin binding at mating-type region replication fork barrier","termid":"FYPO:0003087"}


id: PBO:0055012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2427","termid":"PBO:0055012"}


id: GO:0052609
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-ketotorulene + a reduced electron acceptor + oxygen = 3-hydroxy-4-ketotorulene + an oxidized electron acceptor + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-ketotorulene 3-hydroxylase activity (obsolete GO:0052609)","synonyms":[{"name":"beta-carotene hydroxylase activity","type":"broad"},{"name":"carotene beta-ring hydroxylase activity","type":"broad"}],"termid":"GO:0052609"}


id: GO:1902257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in outflow tract morphogenesis.","definition_xrefs":["PMID:16839542","GOC:mtg_apoptosis","GOC:TermGenie","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in outflow tract morphogenesis","termid":"GO:1902256"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in morphogenesis","termid":"GO:1902338"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in outflow tract morphogenesis","termid":"GO:0003275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in outflow tract morphogenesis","synonyms":[{"name":"down regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"down regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"down-regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"down-regulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"downregulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"downregulation of apoptotic process involved in outflow tract morphogenesis","type":"exact"},{"name":"inhibition of apoptosis involved in outflow tract morphogenesis","type":"narrow"},{"name":"inhibition of apoptotic process involved in outflow tract morphogenesis","type":"narrow"},{"name":"negative regulation of apoptosis involved in outflow tract morphogenesis","type":"narrow"}],"termid":"GO:1902257"}


id: GO:0140940
data:
  {"annotated_genes":["SJAG_02350","SJAG_00943"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[112247,75242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990259"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + a histone H2 = S-adenosyl-L-homocysteine + a methylated histone H2A. Histone methylation generally occurs on either an arginine or a lysine residue.","definition_xrefs":["PMID:28450737"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone methyltransferase activity","termid":"GO:0042054"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00943":null,"SJAG_02350":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0140096","GO:0008276","GO:0003674","GO:0016741","GO:0003824"],"is_obsolete":false,"name":"histone H2A methyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"histone H2A methylase activity","type":"exact"},{"name":"histone H2A methylation","type":"related"}],"termid":"GO:0140940","terms_by_termid":{"GO:1990259":null}}


id: PBO:0061142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NME/NM23 family member 5","termid":"PBO:0061142"}


id: MONDO:0004670
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autoimmune, connective tissue chronic inflammatory disorder affecting the skin, joints, kidneys, lungs, heart, and the peripheral blood cells. It is more commonly seen in women than men. Variants include discoid and systemic lupus erythematosus.","definition_xrefs":["NCIT:C27153"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"lupus erythematosus","secondary_identifiers":["ICD10CM:L93","DOID:8857","ICD10WHO:L93","ICD9:695.4","SCTID:200936003","icd11.foundation:1443317238","MEDGEN:98043","UMLS:C0409974"],"synonyms":[{"name":"lupus","type":"exact"},{"name":"lupus erythematosus","type":"exact"}],"termid":"MONDO:0004670","xrefs":{"Monarch":{"xref_id":"0004670"}}}


id: MONDO:0800104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any immunodeficiency disease which the cause of the disease is a mutation in the PTPRC gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 105","secondary_identifiers":["DOID:0061074","OMIM:619924","UMLS:C5677005","MEDGEN:1809425"],"synonyms":[{"name":"IMD105","type":"exact"},{"name":"SCID, autosomal recessive, T cell-negative, B cell-positive, NK cell-positive","type":"related"},{"name":"severe combined immunodeficiency, autosomal recessive, T cell-negative, B cell-positive, NK cell-positive","type":"related"}],"termid":"MONDO:0800104","xrefs":{"Monarch":{"xref_id":"0800104"}}}


id: FYPO:0005482
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of an inositol phosphate phosphatase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phosphatase activity","termid":"FYPO:0004302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000707","FYPO:0001985","FYPO:0000654","FYPO:0000661"],"is_obsolete":false,"name":"abnormal inositol phosphate phosphatase activity","termid":"FYPO:0005482"}


id: GO:0070336
data:
  {"annotated_genes":["SJAG_01076","SJAG_04671","SJAG_03994","SJAG_04752","SJAG_03780"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77237,80406,114587,118874],"is_not":false,"summary":null,"term":"GO:0070336"},{"annotations":[101376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070337"}]},"cv_name":"molecular_function","definition":"Binding to a flap structure in DNA. A DNA flap structure is one in which a single-stranded length of DNA or RNA protrudes from a double-stranded DNA molecule.","definition_xrefs":["GOC:mah","PMID:15189154"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01076":null,"SJAG_03780":null,"SJAG_03994":null,"SJAG_04671":null,"SJAG_04752":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0005488","GO:0003677","GO:0003674"],"is_obsolete":false,"name":"flap-structured DNA binding","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070336","terms_by_termid":{"GO:0070336":null,"GO:0070337":null}}


id: PBO:0003275
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.3","termid":"PBO:0003275"}


id: GO:0040007
data:
  {"annotated_genes":["SJAG_04509","SJAG_00514","SJAG_02723","SJAG_03486","SJAG_00216","SJAG_04312","SJAG_00124","SJAG_01181","SJAG_02392","SJAG_02838","SJAG_03705","SJAG_01017","SJAG_00993","SJAG_03602","SJAG_00244","SJAG_01456","SJAG_04322","SJAG_03581","SJAG_02169","SJAG_04724"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91875,96589,97858],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0051519"},{"annotations":[96028,89898],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042815"},{"annotations":[101755,105502,108886,112813,90062,118541,119967],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051523"},{"annotations":[78256,76382],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030447"},{"annotations":[121681,121680],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030448"},{"annotations":[92733],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0051517"},{"annotations":[108686],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0030307"},{"annotations":[117108],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0051516"},{"annotations":[100444],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0061387"}]},"cv_name":"biological_process","definition":"The increase in size or mass of an entire organism, a part of an organism or a cell.","definition_xrefs":["GOC:ma","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biological_process","termid":"GO:0008150"}],"gene_count":20,"genes_by_uniquename":{"SJAG_00124":null,"SJAG_00216":null,"SJAG_00244":null,"SJAG_00514":null,"SJAG_00993":null,"SJAG_01017":null,"SJAG_01181":null,"SJAG_01456":null,"SJAG_02169":null,"SJAG_02392":null,"SJAG_02723":null,"SJAG_02838":null,"SJAG_03486":null,"SJAG_03581":null,"SJAG_03602":null,"SJAG_03705":null,"SJAG_04312":null,"SJAG_04322":null,"SJAG_04509":null,"SJAG_04724":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:34427722":null},"secondary_identifiers":["GO:0048590"],"synonyms":[{"name":"growth pattern","type":"related"},{"name":"non-developmental growth","type":"related"}],"termid":"GO:0040007","terms_by_termid":{"GO:0030307":null,"GO:0030447":null,"GO:0030448":null,"GO:0042815":null,"GO:0051516":null,"GO:0051517":null,"GO:0051519":null,"GO:0051523":null,"GO:0061387":null}}


id: SO:0001551
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A sequence variant that increases the rate of transcription with respect to a reference sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rate_of_transcription_variant","termid":"SO:0001550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_transcription_rate_variant","synonyms":[{"name":"increased transcription rate variant","type":"exact"}],"termid":"SO:0001551"}


id: MONDO:0009518
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any leprosy in which the cause of the disease is a mutation in the TLR2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leprosy, susceptibility to, 3","secondary_identifiers":["UMLS:C1968668","MEDGEN:368500","OMIM:246300"],"synonyms":[{"name":"LPRS3","type":"related"},{"name":"TLR2 leprosy","type":"exact"},{"name":"leprosy caused by mutation in TLR2","type":"exact"},{"name":"leprosy, susceptibility to","type":"exact"},{"name":"leprosy, susceptibility to, 3","type":"exact"},{"name":"leprosy, susceptibility to, type 3","type":"exact"},{"name":"susceptibility to leprosy 3","type":"related"}],"termid":"MONDO:0009518","xrefs":{"Monarch":{"xref_id":"0009518"}}}


id: PBO:0052439
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin light chain 4","termid":"PBO:0052439"}


id: GO:2000389
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of neutrophil extravasation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular extravasation","termid":"GO:0002691"},{"relation_name":"is_a","term_name":"regulation of neutrophil migration","termid":"GO:1902622"},{"relation_name":"regulates","term_name":"neutrophil extravasation","termid":"GO:0072672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neutrophil extravasation","termid":"GO:2000389"}


id: MOD:01176
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively cross-links an L-lysine residue and an L-lysine residue converted to allysine with a carbon-nitrogen bond to form L-dehydrolysinonorleucine.","definition_xrefs":["RESID:AA0430","PubMed:16929109"],"direct_ancestors":[{"relation_name":"is_a","term_name":"uncategorized crosslinked residues","termid":"MOD:00692"},{"relation_name":"is_a","term_name":"crosslinked L-lysine residue","termid":"MOD:02051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-dehydrolysinonorleucine","synonyms":[{"name":"(2S)-2-amino-6-([(5S)-5-amino-5-carboxypentylidene]amino)hexanoic acid","type":"exact"},{"name":"6-(N6-L-didehydrolysino)-L-norleucine","type":"exact"},{"name":"CROSSLNK Dehydrolysinonorleucine (Lys-Lys)","type":"exact"},{"name":"L-dehydrolysinonorleucine","type":"exact"},{"name":"N6-[(5S)-5-amino-5-carboxypentylidene]-L-lysine","type":"exact"},{"name":"XLNK6NleN6Lys","type":"exact"},{"name":"dehydrolysinorleucine [misspelling]","type":"exact"},{"name":"dehydrolysylnorleucine","type":"exact"},{"name":"didehydrolysinonorleucine","type":"exact"}],"termid":"MOD:01176"}


id: PBO:0053253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHX5 antisense RNA 1","termid":"PBO:0053253"}


id: GO:1900372
data:
  {"annotated_genes":["SJAG_04422"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of purine nucleotide biosynthetic processes.","definition_xrefs":["GOC:go_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of nucleotide biosynthetic process","termid":"GO:0030809"},{"relation_name":"is_a","term_name":"regulation of purine nucleotide biosynthetic process","termid":"GO:1900371"},{"relation_name":"is_a","term_name":"negative regulation of purine nucleotide metabolic process","termid":"GO:1900543"},{"relation_name":"negatively_regulates","term_name":"purine nucleotide biosynthetic process","termid":"GO:0006164"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04422":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0044281"},{"rel_name":"regulates","termid":"GO:0055086"},{"rel_name":"negatively_regulates","termid":"GO:0055086"},{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"negative regulation of purine nucleotide biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of purine nucleotide anabolism","type":"exact"},{"name":"down regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down regulation of purine nucleotide formation","type":"exact"},{"name":"down regulation of purine nucleotide synthesis","type":"exact"},{"name":"down-regulation of purine nucleotide anabolism","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"down-regulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"down-regulation of purine nucleotide formation","type":"exact"},{"name":"down-regulation of purine nucleotide synthesis","type":"exact"},{"name":"downregulation of purine nucleotide anabolism","type":"exact"},{"name":"downregulation of purine nucleotide biosynthesis","type":"exact"},{"name":"downregulation of purine nucleotide biosynthetic process","type":"exact"},{"name":"downregulation of purine nucleotide formation","type":"exact"},{"name":"downregulation of purine nucleotide synthesis","type":"exact"},{"name":"inhibition of purine nucleotide anabolism","type":"exact"},{"name":"inhibition of purine nucleotide biosynthesis","type":"exact"},{"name":"inhibition of purine nucleotide biosynthetic process","type":"narrow"},{"name":"inhibition of purine nucleotide formation","type":"exact"},{"name":"inhibition of purine nucleotide synthesis","type":"exact"},{"name":"negative regulation of purine nucleotide anabolism","type":"exact"},{"name":"negative regulation of purine nucleotide biosynthesis","type":"exact"},{"name":"negative regulation of purine nucleotide formation","type":"exact"},{"name":"negative regulation of purine nucleotide synthesis","type":"exact"}],"termid":"GO:1900372","terms_by_termid":{"GO:1905707":null}}


id: GO:0008529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Combining with an intracellular peptide to initiate a change in cell activity.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete endogenous peptide receptor activity (obsolete GO:0008529)","synonyms":[{"name":"endogenous peptide receptor activity","type":"exact"}],"termid":"GO:0008529"}


id: PBO:0048314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glyceraldehyde 3 phosphate dehydrogenase pseudogene 25","termid":"PBO:0048314"}


id: PBO:0087924
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Transcription factor that regulates acetate production; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; TDA9 has a paralog, RSF2, that arose from the whole genome duplication","termid":"PBO:0087924"}


id: MONDO:0024228
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A miliaria that is characterized by ductal occlusion of the papillary dermis causing the gland's secretions to leak between the superficial and deep layers of the skin resulting in a rapidly-spreading flesh-colored rash.","definition_xrefs":["DOID:0070320"],"direct_ancestors":[{"relation_name":"is_a","term_name":"miliaria","termid":"MONDO:0006580"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"miliaria profunda","secondary_identifiers":["UMLS:C0263468","ICD10CM:L74.2","MEDGEN:537908","icd11.foundation:1540615212","SCTID:47317002"],"termid":"MONDO:0024228","xrefs":{"Monarch":{"xref_id":"0024228"}}}


id: PBO:0060750
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B3","termid":"PBO:0060750"}


id: GO:0034245
data:
  {"annotated_genes":["SJAG_03014","SJAG_03289"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79372,89413],"is_not":false,"summary":null,"term":"GO:0034245"}]},"cv_name":"cellular_component","definition":"A DNA-directed RNA polymerase complex located in the mitochondrion. Mitochondrial RNA polymerase is composed of two subunits, a catalytic core, which resembles the enzymes from bacteriophage T7 and T3, and a specificity factor required for promoter recognition, which is similar to members of the eubacterial sigma factor family. In S. cerevisiae, these are encoded by the nuclear genes RPO41 and MTF1 and the specificity factor, required for promoter recognition and initiation, is not present in the elongating form.","definition_xrefs":["PMID:7929382","GOC:krc","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-directed RNA polymerase complex","termid":"GO:0000428"},{"relation_name":"is_a","term_name":"mitochondrial protein-containing complex","termid":"GO:0098798"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03014":null,"SJAG_03289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005739","GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitochondrial DNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"mitochondrial RNA polymerase complex","type":"broad"},{"name":"mitochondrial RNA polymerase holoenzyme complex","type":"exact"}],"termid":"GO:0034245","terms_by_termid":{"GO:0034245":null}}


id: MONDO:0004202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from epithelial cells of the adrenal medulla","direct_ancestors":[{"relation_name":"is_a","term_name":"adrenal carcinoma","termid":"MONDO:0002814"},{"relation_name":"is_a","term_name":"adrenal medulla cancer","termid":"MONDO:0003606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adrenal medulla carcinoma","secondary_identifiers":["DOID:7379","NCIT:C9276"],"synonyms":[{"name":"adrenal medulla carcinoma","type":"exact"},{"name":"carcinoma of adrenal medulla","type":"exact"}],"termid":"MONDO:0004202","xrefs":{"Monarch":{"xref_id":"0004202"}}}


id: PBO:0054441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1838","termid":"PBO:0054441"}


id: FYPO:0000658
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of DNA binding by a gene product is decreased, when a gene or the bound DNA sequence is mutated. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal DNA binding","termid":"FYPO:0000656"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000653"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000653","FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"decreased DNA binding","synonyms":[{"name":"reduced DNA binding","type":"exact"}],"termid":"FYPO:0000658"}


id: PBO:0044490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 46 subfamily A member 4, pseudogene","termid":"PBO:0044490"}


id: MONDO:0021455
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the neck.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign neoplasm","termid":"MONDO:0005165"},{"relation_name":"is_a","term_name":"neoplasm of neck","termid":"MONDO:0021351"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"benign neoplasm of neck","secondary_identifiers":["NCIT:C4884","MEDGEN:195775","SCTID:92246000","ICD9:229.8","UMLS:C0684815"],"synonyms":[{"name":"benign neck neoplasm","type":"exact"},{"name":"benign neck tumor","type":"exact"},{"name":"benign neck tumour","type":"exact"},{"name":"benign neoplasm of the neck","type":"exact"},{"name":"benign tumor of neck","type":"exact"},{"name":"benign tumor of the neck","type":"exact"},{"name":"benign tumour of neck","type":"exact"},{"name":"benign tumour of the neck","type":"exact"},{"name":"neck benign neoplasm","type":"exact"}],"termid":"MONDO:0021455","xrefs":{"Monarch":{"xref_id":"0021455"}}}


id: MONDO:0012523
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinitis pigmentosa in which the cause of the disease is a mutation in the PRCD gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinitis pigmentosa","termid":"MONDO:0019200"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066","MONDO:0005328"],"is_obsolete":false,"name":"retinitis pigmentosa 36","secondary_identifiers":["OMIM:610599","GARD:10403","MESH:C566431","UMLS:C1864621","DOID:0110405","ICD10CM:H35.5","MEDGEN:351175"],"synonyms":[{"name":"PRCD retinitis pigmentosa","type":"exact"},{"name":"RP 36","type":"related"},{"name":"RP36","type":"exact"},{"name":"retinitis pigmentosa 36","type":"exact"},{"name":"retinitis pigmentosa caused by mutation in PRCD","type":"exact"},{"name":"retinitis pigmentosa type 36","type":"exact"}],"termid":"MONDO:0012523","xrefs":{"Monarch":{"xref_id":"0012523"}}}


id: MONDO:0005505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign glial-neuronal neoplasm. It is usually supratentorial, located, generally, in the cortex and occurs in children and young adults with a long-standing history of partial seizures. A histologic hallmark of this tumor is the 'specific glioneuronal element', characterized by columns, made up of bundles of axons, oriented perpendicularly to the cortical surface.B","definition_xrefs":["EFO:0005551"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mixed neuronal-glial tumor","termid":"MONDO:0016729"},{"relation_name":"is_a","term_name":"brain neoplasm","termid":"MONDO:0021211"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dysembryoplastic neuroepithelial tumor","secondary_identifiers":["MEDGEN:266109","ONCOTREE:DNT","UMLS:C1266177","Orphanet:251946","SCTID:87211000119104","GARD:10640","DOID:2679","ICDO:9413/0","NCIT:C9505"],"synonyms":[{"name":"DNET","type":"exact"},{"name":"DNT","type":"exact"},{"name":"dysembryoplastic neuroepithelial neoplasm","type":"exact"},{"name":"dysembryoplastic neuroepithelial tumor (morphologic abnormality)","type":"exact"},{"name":"dysembryoplastic neuroepithelial tumour (morphologic abnormality)","type":"exact"}],"termid":"MONDO:0005505","xrefs":{"Monarch":{"xref_id":"0005505"}}}


id: GO:1990592
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A protein ufmylation process in which a polymer of the ubiquitin-like protein UFM1 is formed by linkages between lysine residues at position 69 of the UFM1 monomers, is added to a protein.","definition_xrefs":["PMID:25219498"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein polyufmylation","termid":"GO:1990564"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"protein K69-linked ufmylation","termid":"GO:1990592"}


id: MONDO:0008907
data:
  {"annotated_genes":["SJAG_02783"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86982],"is_not":false,"summary":null,"term":"MONDO:0008907"}]},"cv_name":"mondo","definition":"The most frequent form of congenital disorder of N-glycosylation and is characterized by cerebellar dysfunction, abnormal fat distribution, inverted nipples, strabismus and hypotonia. 3 forms of PMM2-CDG can be distinguished: the infantile multisystem type, late-infantile and childhood ataxia-intellectual disability type (3-10 yrs old), and the adult stable disability type. Infants usually develop ataxia, psychomotor delay and extraneurological manifestations including failure to thrive, enteropathy, hepatic dysfunction, coagulation abnormalities and cardiac and renal involvement. The phenotype is however highly variable and ranges from infants who die in the first year of life to mildly involved adults.","definition_xrefs":["Orphanet:79318"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin disorder","termid":"MONDO:0005093"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02783":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"PMM2-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:138111","UMLS:C0349653","GARD:9826","MESH:C535739","NCIT:C126868","NORD:1585","OMIM:212065","DOID:0080552","SCTID:459063003"],"synonyms":[{"name":"CDG 1A","type":"exact"},{"name":"CDG syndrome type Ia","type":"exact"},{"name":"CDG-IA","type":"exact"},{"name":"CDG1A","type":"exact"},{"name":"Jaeken syndrome","type":"related"},{"name":"PMM2-CDG","type":"exact"},{"name":"PMM2-CDG (CDG-Ia)","type":"related"},{"name":"PMM2-congenital disorder of glycosylation","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ia","type":"exact"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1A","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome type 1A (formerly)","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type Ia","type":"related"},{"name":"carbohydrate-deficient glycoprotein syndrome, type Ia, formerly","type":"related"},{"name":"congenital disorder of glycosylation type 1a","type":"exact"},{"name":"congenital disorder of glycosylation type Ia","type":"exact"},{"name":"congenital disorder of glycosylation, type Ia","type":"related"},{"name":"phosphomannomutase 2 deficiency","type":"exact"}],"termid":"MONDO:0008907","terms_by_termid":{"MONDO:0008907":null},"xrefs":{"Monarch":{"xref_id":"0008907"}}}


id: PBO:0001680
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell division control protein, splicing factor Cdc5","termid":"PBO:0001680"}


id: PBO:0074399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small integral membrane protein 8","termid":"PBO:0074399"}


id: MONDO:0100134
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency","termid":"MONDO:0100133"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex I deficiency, mitochondrial type","termid":"MONDO:0100134","xrefs":{"Monarch":{"xref_id":"0100134"}}}


id: PBO:0012263
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycerate phosphomutase","termid":"PBO:0012263"}


id: GO:0072723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an amitrole stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amitrole","termid":"GO:0072722"},{"relation_name":"is_a","term_name":"cellular response to nitrogen compound","termid":"GO:1901699"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to amitrole","synonyms":[{"name":"cellular response to 3-amino-1,2,4-triazole","type":"exact"}],"termid":"GO:0072723"}


id: GO:0001782
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of B cells such that the total number of B cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:12956429"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lymphocyte homeostasis","termid":"GO:0002260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"B cell homeostasis","synonyms":[{"name":"B lymphocyte homeostasis","type":"exact"},{"name":"B-cell homeostasis","type":"exact"},{"name":"B-lymphocyte homeostasis","type":"exact"}],"termid":"GO:0001782"}


id: MONDO:0007071
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic primary adrenal insufficiency","termid":"MONDO:0015129"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"adrenocortical hypofunction, chronic primary congenital","secondary_identifiers":["MESH:C562711","SCTID:12427005","OMIM:103230","UMLS:C0271740","GARD:15033","MEDGEN:78784","ICD9:255.41"],"synonyms":[{"name":"Addison disease, congenital","type":"related"},{"name":"adrenocortical hypofunction, chronic primary congenital","type":"exact"}],"termid":"MONDO:0007071","xrefs":{"Monarch":{"xref_id":"0007071"}}}


id: GO:0097657
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3',5'-nucleoside bisphosphate + H20 = 5'-nucleoside monophosphate + phosphate.","definition_xrefs":["RHEA:43532","PMID:24401123","GOC:jh2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0016788","GO:0003824"],"is_obsolete":false,"name":"3',5'-nucleotide bisphosphate phosphatase activity","secondary_identifiers":["EC:3.1.3.97"],"termid":"GO:0097657"}


id: SO:0000856
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region that is similar or identical across more than one species.","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_attribute","termid":"SO:0000733"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conserved","termid":"SO:0000856"}


id: PBO:0116712
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAK4 antisense RNA 1","termid":"PBO:0116712"}


id: MONDO:0019248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of inherited lysosomal storage diseases characterized by accumulation of lipids and carbohydrates in the tissues, resulting in mental disabilities and skeletal malformations.","definition_xrefs":["NCIT:C61267"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental anomaly of metabolic origin","termid":"MONDO:0015327"},{"relation_name":"is_a","term_name":"glycoproteinosis","termid":"MONDO:0017731"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002561"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0002561"],"is_obsolete":false,"name":"mucolipidosis","secondary_identifiers":["DOID:0080488","UMLS:C0026697","SCTID:70528007","icd11.foundation:714623911","MEDGEN:7731","GARD:18975","MESH:D009081","Orphanet:79212"],"termid":"MONDO:0019248","xrefs":{"Monarch":{"xref_id":"0019248"}}}


id: PBO:0003322
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AAA family ATPase at the interface between RNA polymerase II and chaperone (predicted)","termid":"PBO:0003322"}


id: PBO:0017789
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron-sulfur cluster assembly protein Cia2 (predicted)","termid":"PBO:0017789"}


id: PBO:0067096
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 134, pseudogene","termid":"PBO:0067096"}


id: MONDO:1011124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Persistent Mullerian duct syndrome that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"persistent Mullerian duct syndrome, non-human animal","termid":"MONDO:1010278"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent Mullerian duct syndrome, goat","secondary_identifiers":["OMIA:000791-9925"],"termid":"MONDO:1011124","xrefs":{"Monarch":{"xref_id":"1011124"}}}


id: PBO:0084309
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Isoamyl acetate-hydrolyzing esterase; required in balance with alcohol acetyltransferase to maintain optimal amounts of isoamyl acetate, which is particularly important in sake brewing","termid":"PBO:0084309"}


id: GO:0032026
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a magnesium ion stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to metal ion","termid":"GO:0010038"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to magnesium ion","termid":"GO:0032026"}


id: GO:1990028
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a calcium ion by an intermediate voltage-gated channel. An intermediate voltage-gated channel is a channel whose open state is dependent on intermediate voltage across the membrane in which it is embedded.","definition_xrefs":["GOC:BHF","Wikipedia:Calcium_channel","GOC:rl","PMID:16382099"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated calcium channel activity","termid":"GO:0005245"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0003674","GO:0022857","GO:0005215"],"is_obsolete":false,"name":"intermediate voltage-gated calcium channel activity","synonyms":[{"name":"R-type calcium channel","type":"related"}],"termid":"GO:1990028"}


id: PBO:0081917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 886, pseudogene","termid":"PBO:0081917"}


id: PBO:0050976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon related developmental regulator 2","termid":"PBO:0050976"}


id: PBO:0001199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SGT1 family transcriptional regulator Sgt1","termid":"PBO:0001199"}


id: PBO:0067971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 273","termid":"PBO:0067971"}


id: PBO:0068389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF207 antisense RNA 1","termid":"PBO:0068389"}


id: GO:0052419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism in its symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by host of substance in symbiont (obsolete GO:0052419)","termid":"GO:0052419"}


id: MONDO:0018603
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary pulmonary alveolar proteinosis","termid":"MONDO:0012580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SFTPC- related interstitial lung disease","secondary_identifiers":["Orphanet:440392","GARD:17744"],"synonyms":[{"name":"SFTPC-related ILD","type":"exact"},{"name":"interstitial lung disease due to SP-C deficiency","type":"exact"},{"name":"interstitial lung disease due to surfactant protein C deficiency","type":"exact"}],"termid":"MONDO:0018603","xrefs":{"Monarch":{"xref_id":"0018603"}}}


id: PBO:0069285
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 541, pseudogene","termid":"PBO:0069285"}


id: PBO:0054026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1357","termid":"PBO:0054026"}


id: PBO:0001875
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho family GTPase Rho4","termid":"PBO:0001875"}


id: PBO:0050987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"intraflagellar transport 70B","termid":"PBO:0050987"}


id: MONDO:0056802
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the synovial bursa.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synovium disorder","termid":"MONDO:0056799"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"synovial bursa disorder","secondary_identifiers":["MEDGEN:538213","SCTID:10597006","UMLS:C0263946"],"synonyms":[{"name":"disease of synovial bursa","type":"exact"},{"name":"disease or disorder of synovial bursa","type":"exact"},{"name":"disorder of bursa","type":"exact"},{"name":"disorder of synovial bursa","type":"exact"},{"name":"synovial bursa disease or disorder","type":"exact"}],"termid":"MONDO:0056802","xrefs":{"Monarch":{"xref_id":"0056802"}}}


id: PATO:0002420
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Having both hydrophilic and hydrophobic (or lipophilic) groups.","definition_xrefs":["wikipedia:http://en.wiktionary.org/wiki/amphiphilic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"affinity","termid":"PATO:0002070"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amphiphilic","termid":"PATO:0002420"}


id: PBO:0084081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTP/GDP exchange factor for Rsr1p (Bud1p); required for both axial and bipolar budding patterns; mutants exhibit random budding in all cell types","termid":"PBO:0084081"}


id: PR:Q9URV2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cut4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9URV2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC106.09","synonyms":[{"name":"20S cyclosome/APC complex protein apc1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cut4","type":"exact"},{"name":"cell untimely torn protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9URV2"}


id: MONDO:0002157
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fallopian tube carcinoma (obsolete MONDO:0002157)","termid":"MONDO:0002157","xrefs":{"Monarch":{"xref_id":"0002157"}}}


id: FYPO:0002162
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of cilofungin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0002682","FYPO:0000003","FYPO:0000139","FYPO:0001985"],"is_obsolete":false,"name":"resistance to cilofungin","synonyms":[{"name":"resistance to cilofungin during mitotic cell cycle","type":"related"},{"name":"resistance to cilofungin during vegetative growth","type":"exact"},{"name":"resistant to cilofungin","type":"exact"}],"termid":"FYPO:0002162"}


id: SO:0000221
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A primary transcript encoding leucyl tRNA (SO:0000264).","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA_primary_transcript","termid":"SO:0000210"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine_tRNA_primary_transcript","synonyms":[{"name":"leucine tRNA primary transcript","type":"exact"}],"termid":"SO:0000221"}


id: MONDO:0032706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive cerebellar ataxia","termid":"MONDO:0015244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0005559","MONDO:0006025"],"is_obsolete":false,"name":"spinocerebellar ataxia, autosomal recessive 27","secondary_identifiers":["OMIM:618369","MEDGEN:1672866","UMLS:C5193058","DOID:0111616"],"synonyms":[{"name":"SCAR27","type":"related"},{"name":"SPINOCEREBELLAR ATAXIA, AUTOSOMAL RECESSIVE 27","type":"related"}],"termid":"MONDO:0032706","xrefs":{"Monarch":{"xref_id":"0032706"}}}


id: PBO:0029454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_N-glycan_processing","termid":"PBO:0029454"}


id: GO:0019767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with an immunoglobulin of the IgE isotype via the Fc region, and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:add","GOC:signaling","ISBN:0781735149"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immunoglobulin receptor activity","termid":"GO:0019763"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"IgE receptor activity","termid":"GO:0019767"}


id: PBO:0036045
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_protein_threonine_phosphorylation_at_Thr-Pro_site_during_vegetative_growth","termid":"PBO:0036045"}


id: GO:0015553
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of xanthosine, xanthine riboside, from one side of a membrane to the other.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleoside transmembrane transporter activity","termid":"GO:0015211"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"xanthosine transmembrane transporter activity","termid":"GO:0015553"}


id: MONDO:0005049
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Bleeding within the cranium.","definition_xrefs":["NCIT:P378"],"gene_count":0,"genotype_count":0,"name":"obsolete intracranial hemorrhage (obsolete MONDO:0005049)","secondary_identifiers":["ICD9:432.9","MESH:D020300","SCTID:105629000","NCIT:C34463"],"termid":"MONDO:0005049","xrefs":{"Monarch":{"xref_id":"0005049"}}}


id: PBO:0040757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"B double prime 1 pseudogene","termid":"PBO:0040757"}


id: GO:0003822
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete MHC-interacting protein (obsolete GO:0003822)","synonyms":[{"name":"MHC-interacting protein","type":"exact"}],"termid":"GO:0003822"}


id: GO:0005761
data:
  {"annotated_genes":["SJAG_04216","SJAG_02836","SJAG_01473","SJAG_07009","SJAG_06253","SJAG_00889","SJAG_04918","SJAG_05244","SJAG_02324","SJAG_00497","SJAG_00628","SJAG_01413","SJAG_03649","SJAG_01520","SJAG_04490","SJAG_01630","SJAG_02071","SJAG_00844","SJAG_02762","SJAG_00148","SJAG_04378","SJAG_03065","SJAG_02067","SJAG_04893","SJAG_03192","SJAG_00105","SJAG_04494","SJAG_03040","SJAG_01591","SJAG_02359","SJAG_03053","SJAG_01767","SJAG_03176","SJAG_04164","SJAG_01045","SJAG_01303","SJAG_00086","SJAG_05573","SJAG_00799","SJAG_03584","SJAG_01463","SJAG_04207","SJAG_00513","SJAG_04281","SJAG_01734","SJAG_02201","SJAG_03402","SJAG_04244","SJAG_02777","SJAG_03636","SJAG_00077","SJAG_06110","SJAG_01727","SJAG_01829","SJAG_00944","SJAG_00860","SJAG_04689","SJAG_05320","SJAG_03459","SJAG_02643","SJAG_05218","SJAG_04019","SJAG_02452","SJAG_05270","SJAG_00060","SJAG_03297","SJAG_01478","SJAG_03284","SJAG_04493","SJAG_00315","SJAG_01719","SJAG_04889","SJAG_04788","SJAG_04173","SJAG_04753","SJAG_01468","SJAG_00782"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[78593,82373,107731,80372,81798,80062,113155,68582,74097,74754,75015,105697,110116,111887,99991,79243,81665,110265,118213,77339,79833,81188,116767,76772,77564,112827,78567,73159,72719,99970,108788,110215,114280,119982,116649,115506,74420,73769,71582,80090,81348,98606,114780,118322],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005762"},{"annotations":[94091,110120,74317,91940,106019,112715,108427,77677,74549,91966,99994,108062,75181,110380,118073,112432,76067,78506,104326,114416,71112,76115,117653,96500,120151,98638,80290,97937,96199,99995,112179,105097,110624],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0005763"}]},"cv_name":"cellular_component","definition":"A ribosome found in the mitochondrion of a eukaryotic cell; contains a characteristic set of proteins distinct from those of cytosolic ribosomes.","definition_xrefs":["GOC:mah","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organellar ribosome","termid":"GO:0000313"},{"relation_name":"part_of","term_name":"mitochondrial matrix","termid":"GO:0005759"}],"gene_count":77,"genes_by_uniquename":{"SJAG_00060":null,"SJAG_00077":null,"SJAG_00086":null,"SJAG_00105":null,"SJAG_00148":null,"SJAG_00315":null,"SJAG_00497":null,"SJAG_00513":null,"SJAG_00628":null,"SJAG_00782":null,"SJAG_00799":null,"SJAG_00844":null,"SJAG_00860":null,"SJAG_00889":null,"SJAG_00944":null,"SJAG_01045":null,"SJAG_01303":null,"SJAG_01413":null,"SJAG_01463":null,"SJAG_01468":null,"SJAG_01473":null,"SJAG_01478":null,"SJAG_01520":null,"SJAG_01591":null,"SJAG_01630":null,"SJAG_01719":null,"SJAG_01727":null,"SJAG_01734":null,"SJAG_01767":null,"SJAG_01829":null,"SJAG_02067":null,"SJAG_02071":null,"SJAG_02201":null,"SJAG_02324":null,"SJAG_02359":null,"SJAG_02452":null,"SJAG_02643":null,"SJAG_02762":null,"SJAG_02777":null,"SJAG_02836":null,"SJAG_03040":null,"SJAG_03053":null,"SJAG_03065":null,"SJAG_03176":null,"SJAG_03192":null,"SJAG_03284":null,"SJAG_03297":null,"SJAG_03402":null,"SJAG_03459":null,"SJAG_03584":null,"SJAG_03636":null,"SJAG_03649":null,"SJAG_04019":null,"SJAG_04164":null,"SJAG_04173":null,"SJAG_04207":null,"SJAG_04216":null,"SJAG_04244":null,"SJAG_04281":null,"SJAG_04378":null,"SJAG_04490":null,"SJAG_04493":null,"SJAG_04494":null,"SJAG_04689":null,"SJAG_04753":null,"SJAG_04788":null,"SJAG_04889":null,"SJAG_04893":null,"SJAG_04918":null,"SJAG_05218":null,"SJAG_05244":null,"SJAG_05270":null,"SJAG_05320":null,"SJAG_05573":null,"SJAG_06110":null,"SJAG_06253":null,"SJAG_07009":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005739"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005739"],"is_obsolete":false,"name":"mitochondrial ribosome","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"55S ribosome, mitochondrial","type":"narrow"}],"termid":"GO:0005761","terms_by_termid":{"GO:0005762":null,"GO:0005763":null}}


id: PBO:0016938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sSchizosaccharomyces specific protein","termid":"PBO:0016938"}


id: MONDO:0956981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An IDH-mutant anaplastic astrocytoma that is characterized by the presence of necrosis and/or microvascular proliferation or homozygous deletion of CDKN2A and/or CDKN2B genes. The term glioblastoma no longer applies to central nervous system WHO grade 4 IDH-mutant astrocytomas.","definition_xrefs":["DOID:0080877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"IDH-mutant anaplastic astrocytoma","termid":"MONDO:0850332"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"astrocytoma, IDH-mutant, grade 4","secondary_identifiers":["NCIT:C167335","UMLS:C5238471","MEDGEN:1718223"],"termid":"MONDO:0956981","xrefs":{"Monarch":{"xref_id":"0956981"}}}


id: PBO:0039299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG13 UDP-N-acetylglucosaminyltransferase subunit","termid":"PBO:0039299"}


id: PBO:0053232
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ligatin","termid":"PBO:0053232"}


id: PBO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"scaffold protein Scd2","termid":"PBO:0001524"}


id: MONDO:0800123
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An interstitial lung disease characterized histologically by fibrosis and/or inflammation confined to the alveolar interstitium around bronchovascular bundles, overlapping with peribronchial metaplasia, fibrosis in some series and the lack of interstitial granulomas.","definition_xrefs":["PMID:26627191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pneumonia","termid":"MONDO:0005249"},{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bronchiolocentric pattern of interstitial pneumonia","synonyms":[{"name":"BPIP","type":"exact"}],"termid":"MONDO:0800123","xrefs":{"Monarch":{"xref_id":"0800123"}}}


id: PR:O43048
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC215.01 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O43048"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC domain-containing protein C215.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC215.01","synonyms":[{"name":"Spom972h-SPBC215.01","type":"exact"}],"termid":"PR:O43048"}


id: PBO:0056972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 26b","termid":"PBO:0056972"}


id: PBO:0049165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRAM domain containing 4 pseudogene 7","termid":"PBO:0049165"}


id: _global:increased_in_presence_of
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD_extension_relations","definition":"Identifies a substance, where the modification is present to a greater extent in the presence than in the absence of the substance.","definition_xrefs":["PomBase:mah"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased_in_presence_of","termid":"_global:increased_in_presence_of"}


id: GO:0031932
data:
  {"annotated_genes":["SJAG_01320","SJAG_02723","SJAG_03067","SJAG_00117","SJAG_04460","SJAG_01020","SJAG_04987"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[57743,60962,74548,79050,79502,80764,101390],"is_not":false,"summary":null,"term":"GO:0031932"}]},"cv_name":"cellular_component","definition":"A protein complex that contains at least TOR (target of rapamycin) and Rictor (rapamycin-insensitive companion of TOR), or orthologs of, in complex with other signaling components. Mediates the phosphorylation and activation of PKB (also called AKT). In Saccharomyces, the complex contains Avo1p, Avo2p, Tsc11p, Lst8p, Bit61p, Slm1p, Slm2p, and Tor2p.","definition_xrefs":["PMID:14736892","GOC:bf","GOC:jh","PMID:16469695","PMID:21548787","PMID:15780592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TOR complex","termid":"GO:0038201"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00117":null,"SJAG_01020":null,"SJAG_01320":null,"SJAG_02723":null,"SJAG_03067":null,"SJAG_04460":null,"SJAG_04987":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"TORC2 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Wikipedia:MTORC1"],"synonyms":[{"name":"TOR complex 2","type":"exact"},{"name":"TORC 2 complex","type":"exact"},{"name":"TORC2","type":"exact"},{"name":"mTORC2","type":"narrow"},{"name":"rapamycin and nutrient-insensitive TOR complex","type":"exact"}],"termid":"GO:0031932","terms_by_termid":{"GO:0031932":null}}


id: PBO:0052092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kelch repeat and BTB domain containing 11","termid":"PBO:0052092"}


id: MONDO:1012067
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, non-human animal","termid":"MONDO:1011688"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital dyserythropoietic anemia with dyskeratosis and progressive alopecia, cattle","secondary_identifiers":["OMIA:000313-9913"],"termid":"MONDO:1012067","xrefs":{"Monarch":{"xref_id":"1012067"}}}


id: PBO:0052625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 4","termid":"PBO:0052625"}


id: FYPO:0007252
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of binding to a lipid in a membrane by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased lipid binding","termid":"FYPO:0007251"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000652","FYPO:0000707"],"is_obsolete":false,"name":"decreased membrane lipid binding","synonyms":[{"name":"decreased binding to lipid in membrane","type":"exact"},{"name":"reduced membrane lipid binding","type":"exact"}],"termid":"FYPO:0007252"}


id: GO:0009061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The enzymatic release of energy from inorganic and organic compounds (especially carbohydrates and fats) which uses compounds other than oxygen (e.g. nitrate, sulfate) as the terminal electron acceptor.","definition_xrefs":["GOC:jl","GOC:das","ISBN:0140513590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular respiration","termid":"GO:0045333"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"anaerobic respiration","secondary_identifiers":["Wikipedia:Cellular_respiration#Anaerobic_respiration","Wikipedia:Anaerobic_respiration","MetaCyc:ANAEROBIC-RESPIRATION"],"termid":"GO:0009061"}


id: PBO:0047391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 31","termid":"PBO:0047391"}


id: PBO:0001207
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uracil phosphoribosyltransferase (predicted)","termid":"PBO:0001207"}


id: PBO:0052589
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinetochore associated 1","termid":"PBO:0052589"}


id: PBO:0113804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-protein ligase E3, phosphate quantity regulator Pqr1/Spx1","termid":"PBO:0113804"}


id: GO:0006022
data:
  {"annotated_genes":["SJAG_03723","SJAG_00978","SJAG_00620","SJAG_04728","SJAG_04868","SJAG_02845","SJAG_00442"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[73884,76191,72952,76399,80287,112096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006031"},{"annotations":[68667],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006032"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving aminoglycans, any polymer containing amino groups that consists of more than about 10 monosaccharide residues joined to each other by glycosidic linkages.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"carbohydrate derivative metabolic process","termid":"GO:1901135"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00442":null,"SJAG_00620":null,"SJAG_00978":null,"SJAG_02845":null,"SJAG_03723":null,"SJAG_04728":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aminoglycan metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000043":null,"GO_REF:0000107":null},"synonyms":[{"name":"aminoglycan metabolism","type":"exact"}],"termid":"GO:0006022","terms_by_termid":{"GO:0006031":null,"GO:0006032":null}}


id: GO:0009988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Cell recognition between cells. May involve the formation of specialized cell junctions.","definition_xrefs":["ISBN:0824072820"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell recognition","termid":"GO:0008037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell-cell recognition","termid":"GO:0009988"}


id: PBO:0057095
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 191","termid":"PBO:0057095"}


id: PBO:0085647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in meiotic recombination; required for normal levels of crossing over, colocalizes with Zip2p to discrete foci on meiotic chromosomes, has homology to bacterial MutS protein","termid":"PBO:0085647"}


id: GO:0072012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a glomerulus vasculature from an initial condition to its mature state. This process begins with the formation of the glomerulus vasculature and ends with the mature structure. The glomerulus vasculature is composed of the tubule structures that carry blood or lymph in the glomerulus.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"blood vessel development","termid":"GO:0001568"},{"relation_name":"is_a","term_name":"kidney vasculature development","termid":"GO:0061440"},{"relation_name":"part_of","term_name":"glomerulus development","termid":"GO:0032835"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"glomerulus vasculature development","synonyms":[{"name":"glomerulus capillary development","type":"related"}],"termid":"GO:0072012"}


id: MOD:01861
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by condensation of a cysteine thiol with the amido nitrogen of the following residue to form an isothiazolidinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"crosslinked residues","termid":"MOD:00033"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isothiazolidinone ring crosslinked residues","termid":"MOD:01861"}


id: GO:0007594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The adhesion of the puparia of Diptera to their substrate; normally effected by a 'glue' secreted by the larval salivary gland and expectorated at the time of pupariation.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"multicellular organism adhesion to substrate","termid":"GO:0022609"},{"relation_name":"part_of","term_name":"molting cycle, chitin-based cuticle","termid":"GO:0007591"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"puparial adhesion","synonyms":[{"name":"puparial glue","type":"related"}],"termid":"GO:0007594"}


id: GO:0004478
data:
  {"annotated_genes":["SJAG_03659"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[76958],"is_not":false,"summary":null,"term":"GO:0004478"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + L-methionine + H2O = phosphate + diphosphate + S-adenosyl-L-methionine.","definition_xrefs":["EC:2.5.1.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transferase activity, transferring alkyl or aryl (other than methyl) groups","termid":"GO:0016765"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03659":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016765"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016765","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"methionine adenosyltransferase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["RHEA:21080","Reactome:R-HSA-174391","Reactome:R-HSA-5603114","Reactome:R-HSA-5603087","MetaCyc:S-ADENMETSYN-RXN"],"synonyms":[{"name":"ATP-methionine adenosyltransferase activity","type":"related"},{"name":"ATP:L-methionine S-adenosyltransferase activity","type":"related"},{"name":"AdoMet synthetase activity","type":"related"},{"name":"S-adenosyl-L-methionine synthetase activity","type":"related"},{"name":"S-adenosylmethionine synthase activity","type":"related"},{"name":"S-adenosylmethionine synthetase activity","type":"related"},{"name":"adenosylmethionine synthetase activity","type":"related"},{"name":"methionine S-adenosyltransferase activity","type":"related"},{"name":"methionine-activating enzyme","type":"related"}],"termid":"GO:0004478","terms_by_termid":{"GO:0004478":null}}


id: PBO:0005361
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin For3","termid":"PBO:0005361"}


id: MONDO:1011442
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Enteropathy-associated T cell lymphoma that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-hodgkin lymphoma, non-human animal","termid":"MONDO:1010214"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enteropathy-associated T cell lymphoma, non-human animal","secondary_identifiers":["OMIA:002526"],"termid":"MONDO:1011442","xrefs":{"Monarch":{"xref_id":"1011442"}}}


id: MONDO:0800206
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa dystrophica","termid":"MONDO:0006543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa dystrophica with subcorneal cleavage","secondary_identifiers":["MEDGEN:436495","UMLS:C2675683"],"synonyms":[{"name":"EBDSC","type":"exact"}],"termid":"MONDO:0800206","xrefs":{"Monarch":{"xref_id":"0800206"}}}


id: PBO:0003803
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoserine phosphatase Ser2 (predicted)","termid":"PBO:0003803"}


id: PBO:0071107
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L21 pseudogene 109","termid":"PBO:0071107"}


id: MONDO:0018891
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tumoral calcinosis is a phosphocalcic metabolism anomaly, particularly among younger age groups and characterized by the presence of calcified masses in the juxta-articular regions (hip, elbow, ankle and scapula) without joint involvement. Histologically, lesions dysplay collagen necrobiosis, followed by cyst formation and a foreign-body response with calcification Two forms of tumoral calcinosis have been described: normocalcemic tumoral calcinosis and familial tumoral calcinosis.","definition_xrefs":["Orphanet:53715"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare skin tumor or hamartoma (obsolete MONDO:0019300)","termid":"MONDO:0019300"},{"relation_name":"is_a","term_name":"integumentary system disorder","termid":"MONDO:0002051"},{"relation_name":"is_a","term_name":"endocrine gland neoplasm","termid":"MONDO:0002082"},{"relation_name":"is_a","term_name":"calcinosis","termid":"MONDO:0002123"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"familial tumoral calcinosis","secondary_identifiers":["MedDRA:10059364","MEDGEN:452340","UMLS:C0263628","EFO:0009385","GARD:10877"],"termid":"MONDO:0018891","xrefs":{"Monarch":{"xref_id":"0018891"}}}


id: FYPO:0001167
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of ATPase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000707","FYPO:0000661","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"abnormal ATPase activity","termid":"FYPO:0001167"}


id: PR:Q10232
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rpl901 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"60S ribosomal protein L9-A (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4G9.16c","synonyms":[{"name":"Spom972h-rpl901","type":"exact"}],"termid":"PR:Q10232"}


id: FYECO:0000402
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which xylose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"xylose added","termid":"FYECO:0000402"}


id: PR:O14020
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC29A4.17c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14020"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C29A4.17c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC29A4.17c","synonyms":[{"name":"Spom972h-SPAC29A4.17c","type":"exact"}],"termid":"PR:O14020"}


id: GO:0141100
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + guanosine 18 in tRNA= S-adenosyl-L-homocysteine + 2'-O-methylguanosine 18 in tRNA + H+.","definition_xrefs":["PMID:25404562"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA (guanine) methyltransferase activity","termid":"GO:0016423"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0140101","GO:0003674","GO:0016741","GO:0140098","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"tRNA (guanine(18)-2'-O)-methyltransferase activity","secondary_identifiers":["EC:2.1.1.34","RHEA:20077","MetaCyc:2.1.1.34-RXN"],"synonyms":[{"name":"tRNA (guanosine(18)-2'-O)-methyltransferase activity","type":"exact"}],"termid":"GO:0141100"}


id: PBO:0063002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAF1 homolog, Paf1/RNA polymerase II complex component","termid":"PBO:0063002"}


id: PBO:0018114
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial aspartate-tRNA ligase Dar2 (predicted)","termid":"PBO:0018114"}


id: GO:0030492
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to hemoglobin, an oxygen carrying, conjugated protein containing four heme groups and globin.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding","termid":"GO:0005515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005515","GO:0003674","GO:0005488"],"is_obsolete":false,"name":"hemoglobin binding","synonyms":[{"name":"globin binding","type":"broad"},{"name":"haemoglobin binding","type":"exact"}],"termid":"GO:0030492"}


id: GO:0102464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: zeaxanthin + O2 + NADH + H+ = caloxanthin + H2O + NAD.","definition_xrefs":["GOC:pz","PMID:22509387"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"zeaxanthin 2-beta-hydroxylase activity","secondary_identifiers":["MetaCyc:RXN-14016"],"termid":"GO:0102464"}


id: PBO:0056360
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase 3","termid":"PBO:0056360"}


id: PBO:0044724
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD/H-box helicase 11 like 11 (pseudogene)","termid":"PBO:0044724"}


id: MONDO:0006846
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe hypertension that is characterized by rapid onset of extremely high blood pressure and hypertension-mediated organ damage.","definition_xrefs":["PMID:38658108","PMID:30165516","NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypertensive disorder","termid":"MONDO:0005044"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant hypertension","secondary_identifiers":["DOID:10824","EFO:1001031","MedDRA:10025600","MEDGEN:9374","MESH:D006974","SCTID:70272006","UMLS:C0020540"],"synonyms":[{"name":"MHT","type":"broad"},{"name":"accelerated-malignant hypertension","type":"exact"},{"name":"hypertensive emergency","type":"exact"},{"name":"malignant phase hypertension","type":"exact"}],"termid":"MONDO:0006846","xrefs":{"Monarch":{"xref_id":"0006846"}}}


id: PBO:0109619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 11 pseudogene","termid":"PBO:0109619"}


id: MONDO:0005108
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any disease caused by a virus.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"infectious disease","termid":"MONDO:0005550"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"viral infectious disease","secondary_identifiers":["SCTID:34014006","ICD9:079.99","MESH:D014777","DOID:934","NCIT:C3439","EFO:0000763","ICD9:078.89","ICD9:060-066","ICD9:066.9"],"synonyms":[{"name":"Viruses caused disease or disorder","type":"exact"},{"name":"Viruses disease or disorder","type":"exact"},{"name":"Viruses infection","type":"exact"},{"name":"Viruses infectious disease","type":"exact"},{"name":"infection, viral","type":"exact"},{"name":"infections, Viruses","type":"related"},{"name":"viral disease","type":"exact"},{"name":"viral disorder","type":"exact"},{"name":"viral infection","type":"exact"},{"name":"virus infection","type":"exact"}],"termid":"MONDO:0005108","xrefs":{"Monarch":{"xref_id":"0005108"}}}


id: PR:Q9P7B3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sst1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7B3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation exchanger C521.04c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC521.04c","synonyms":[{"name":"Spom972h-sst1","type":"exact"}],"termid":"PR:Q9P7B3"}


id: MONDO:0020356
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A congenital or acquired defect characterized by the presence of a hole in or adjacent to the iris.","definition_xrefs":["NCIT:C98879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"coloboma, ocular, autosomal dominant","termid":"MONDO:0007350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"coloboma of iris","secondary_identifiers":["ICD10CM:Q13.0","icd11.foundation:1552972259","MedDRA:10052642","Orphanet:98944","GARD:1434","SCTID:9446007","HP:0000612","MEDGEN:116097","UMLS:C0240063"],"synonyms":[{"name":"coloboma of iris","type":"exact"},{"name":"coloboma of iris (disease)","type":"exact"},{"name":"coloboma of the iris","type":"exact"}],"termid":"MONDO:0020356","xrefs":{"Monarch":{"xref_id":"0020356"}}}


id: PBO:0062492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily B member 8","termid":"PBO:0062492"}


id: GO:0075028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent symbiont appressorium initiation.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of appressorium initiation (obsolete GO:0075028)","synonyms":[{"name":"negative regulation of appressorium initiation on or near host","type":"related"},{"name":"negative regulation of initiation of appressorium on or near host","type":"exact"}],"termid":"GO:0075028"}


id: SO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Complete lack of transcription of a gene, as a consequence of a variant in the gene or a regulatory region.","direct_ancestors":[{"relation_name":"is_a","term_name":"decreased_transcript_level_variant","termid":"SO:0001541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"abolished_transcription_level_variant","synonyms":[{"name":"abolished transcription","type":"exact"},{"name":"abolished transcription level","type":"exact"},{"name":"abolished transcription level variant","type":"exact"}],"termid":"SO:0002391"}


id: GO:0051717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1D-myo-inositol 1,3,4,5-tetrakisphosphate + H2O = 1D-myo-inositol 1,4,5-trisphosphate + phosphate.","definition_xrefs":["RHEA:77155"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol tetrakisphosphate phosphatase activity","termid":"GO:0052743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"inositol-1,3,4,5-tetrakisphosphate 3-phosphatase activity","secondary_identifiers":["Reactome:R-HSA-1855200","Reactome:R-HSA-1855205","MetaCyc:3.1.3.62-RXN"],"synonyms":[{"name":"inositol (1,3,4,5)-tetrakisphosphate 3-phosphatase activity","type":"related"},{"name":"inositol 1,3,4,5-tetrakisphosphate 3-phosphomonoesterase activity","type":"related"},{"name":"inositol 1,3,4,5-tetrakisphosphate-5-phosphomonoesterase activity","type":"related"}],"termid":"GO:0051717"}


id: FYPO:0001197
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of calcium ion measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased level of substance in cell during vegetative growth","termid":"FYPO:0001329"},{"relation_name":"is_a","term_name":"altered cellular calcium level","termid":"FYPO:0001462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"decreased cellular calcium level","synonyms":[{"name":"decreased calcium accumulation","type":"related"},{"name":"decreased cellular calcium ion level","type":"exact"},{"name":"decreased cellular calcium level during mitotic cell cycle","type":"related"},{"name":"decreased cellular calcium level during vegetative growth","type":"exact"},{"name":"reduced cellular calcium level","type":"exact"}],"termid":"FYPO:0001197"}


id: PBO:0034222
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-contributes_to_morphology_of","termid":"PBO:0034222"}


id: PBO:0017716
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex, platform subcomplex scaffold TPR subunit Apc5","termid":"PBO:0017716"}


id: MONDO:0033282
data:
  {"annotated_genes":["SJAG_03701"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87336],"is_not":false,"summary":null,"term":"MONDO:0033282"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"fatal multiple mitochondrial dysfunctions syndrome","termid":"MONDO:0017338"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03701":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066","MONDO:0002525"],"is_obsolete":false,"name":"multiple mitochondrial dysfunctions syndrome 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["Orphanet:569274","DOID:0080274","GARD:22305","MEDGEN:1623132","UMLS:C4539919","OMIM:617613"],"synonyms":[{"name":"MMDS5","type":"related"},{"name":"multiple mitochondrial dysfunctions syndrome 5","type":"exact"}],"termid":"MONDO:0033282","terms_by_termid":{"MONDO:0033282":null},"xrefs":{"Monarch":{"xref_id":"0033282"}}}


id: GO:0050342
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: gamma-tocopherol + S-adenosyl-L-methionine = (+)-alpha-tocopherol + H+ + S-adenosyl-L-homocysteine. This reaction can also use delta-tocopherol, gamma-tocotrienol and delta-tocotrienol as substrates.","definition_xrefs":["EC:2.1.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methyltransferase activity","termid":"GO:0008171"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"tocopherol C-methyltransferase activity","secondary_identifiers":["MetaCyc:TOCOPHEROL-O-METHYLTRANSFERASE-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:gamma-tocopherol 5-O-methyltransferase activity","type":"related"},{"name":"gamma-tocopherol methyltransferase activity","type":"exact"},{"name":"tocopherol O-methyltransferase activity","type":"exact"}],"termid":"GO:0050342"}


id: PBO:0083409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YLR366W","termid":"PBO:0083409"}


id: GO:0106313
data:
  {"annotated_genes":["SJAG_03712","SJAG_01466"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98654,100420],"is_not":false,"summary":null,"term":"GO:0106313"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: (6S)-5-methyl-5,6,7,8-tetrahydrofolate + NADP+ = (6R)-5,10-methylene-5,6,7,8-tetrahydrofolate + NADPH + H+.","definition_xrefs":["RHEA:19817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylenetetrahydrofolate reductase [NAD(P)H] activity","termid":"GO:0004489"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01466":null,"SJAG_03712":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methylenetetrahydrofolate reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["EC:1.5.1.53","MetaCyc:RXN-21991"],"termid":"GO:0106313","terms_by_termid":{"GO:0106313":null}}


id: FYPO:0007807
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the activity of a endodeoxyribonuclease activator is decreased.","definition_xrefs":["PomBase:mah","GO:0140656","PMID:33836577"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity regulator phenotype","termid":"FYPO:0007690"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000652"],"is_obsolete":false,"name":"decreased endodeoxyribonuclease activator activity","termid":"FYPO:0007807"}


id: GO:0102202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + solasodine = UDP + solasodine 3-O-beta-D-glucopyranoside + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete soladodine glucosyltransferase activity (obsolete GO:0102202)","termid":"GO:0102202"}


id: GO:0072066
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the prebend segment over time, from its formation to the mature structure. The prebend segment is a part of the descending thin limb that lies before the bend and exhibits permeabilities characteristic of the ascending limb, especially negligible water permeability.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tube development","termid":"GO:0035295"},{"relation_name":"part_of","term_name":"descending thin limb development","termid":"GO:0072022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"prebend segment development","termid":"GO:0072066"}


id: PBO:0083780
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential nucleolar protein required for pre-18S rRNA processing; interacts with Dim1p, an 18S rRNA dimethyltransferase, and also with Nob1p, which is involved in proteasome biogenesis; contains a KH domain","termid":"PBO:0083780"}


id: PBO:0054299
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1690","termid":"PBO:0054299"}


id: GO:0031254
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The area of a motile cell opposite to the direction of movement.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cell trailing edge","synonyms":[{"name":"back of cell","type":"exact"},{"name":"trailing edge","type":"exact"}],"termid":"GO:0031254"}


id: FYECO:0000048
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which petroselinic acid was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"+ fatty acid","termid":"FYECO:0000042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ petroselinic acid","termid":"FYECO:0000048"}


id: GO:0036116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of long-chain fatty-acyl-CoAs, any derivative of coenzyme A in which the sulfhydryl group is in a thioester linkage with a long-chain fatty-acyl group. A long-chain fatty acid has an aliphatic tail containing 13 to 22 carbons.","definition_xrefs":["GOC:pm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"long-chain fatty-acyl-CoA metabolic process","termid":"GO:0035336"},{"relation_name":"is_a","term_name":"fatty-acyl-CoA catabolic process","termid":"GO:0036115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0006790"}],"interesting_parent_ids":["GO:0006629","GO:0008150","GO:0006790","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"long-chain fatty-acyl-CoA catabolic process","synonyms":[{"name":"long-chain fatty-acyl-CoA breakdown","type":"exact"},{"name":"long-chain fatty-acyl-CoA catabolism","type":"exact"},{"name":"long-chain fatty-acyl-CoA degradation","type":"exact"}],"termid":"GO:0036116"}


id: PR:000027598
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A fungal histone H3.3, initiator methionine removed form in Schizosaccharomyces pombe.","definition_xrefs":["PMID:20929775","PomBase:MAH","PMID:11242054"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3.3 (Schizosaccharomyces pombe)","termid":"PR:000027596"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fungal histone H3.3, initiator methionine removed form (Schizosaccharomyces pombe)","pombase_gene_id":"SPBC1105.11c","synonyms":[{"name":"Spom-hht3/InitMet-","type":"exact"}],"termid":"PR:000027598"}


id: PBO:0052987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte associated immunoglobulin like receptor 2","termid":"PBO:0052987"}


id: PBO:0073847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 9 member A2","termid":"PBO:0073847"}


id: MONDO:0016386
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by the association of hypogonadotropic hypogonadism (with primary amenorrhea and lack of secondary sexual development) and retinitis pigmentosa. It has been described in two sisters born to nonconsanguineous parents.","definition_xrefs":["Orphanet:2235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"congenital hypogonadotropic hypogonadism","termid":"MONDO:0015770"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypogonadotropic hypogonadism-retinitis pigmentosa syndrome","secondary_identifiers":["MEDGEN:419479","GARD:1234","UMLS:C2931722","MESH:C538075"],"synonyms":[{"name":"Chang-Davidson-Carlson syndrome","type":"exact"}],"termid":"MONDO:0016386","xrefs":{"Monarch":{"xref_id":"0016386"}}}


id: GO:0099158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of transport or maintenance of location of a postsynaptic recycling endosome within the postsynapse.","definition_xrefs":["PMID:20098723","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"regulates","term_name":"synaptic vesicle recycling via endosome","termid":"GO:0036466"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of recycling endosome localization within postsynapse","termid":"GO:0099158"}


id: GO:0039698
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Polyadenylation of viral mRNA through a polymerase stuttering mechanism. The stop signal present at the end of each gene comprises a stretch of uridine on which the viral polymerase acquires a stuttering behavior: after each adenine inserted, the polymerase moves back one nucleotide along with the mRNA. It resumes transcription adding a new adenine, then again moves back, thereby producing a polyA tail.","definition_xrefs":["VZ:1916"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral process","termid":"GO:0016032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyadenylation of viral mRNA by polymerase stuttering","synonyms":[{"name":"polyA stuttering","type":"exact"}],"termid":"GO:0039698"}


id: MONDO:0010474
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any microphthalmia with linear skin defects syndrome in which the cause of the disease is a mutation in the COX7B gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"linear skin defects with multiple congenital anomalies","termid":"MONDO:0010672"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0005093"],"is_obsolete":false,"name":"linear skin defects with multiple congenital anomalies 2","secondary_identifiers":["GARD:15272","DOID:0111877","MEDGEN:763835","OMIM:300887","UMLS:C3550921"],"synonyms":[{"name":"COX7B microphthalmia with linear skin defects syndrome","type":"exact"},{"name":"LSDMCA2","type":"related"},{"name":"aplasia cutis congenita, Reticulolinear, with microcephaly, Facial Dysmorphism, and Other congenital anomalies","type":"related"},{"name":"linear skin defects with multiple congenital anomalies 2","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies 2, X-linked dominant","type":"exact"},{"name":"linear skin defects with multiple congenital anomalies type 2","type":"exact"},{"name":"microphthalmia with linear skin defects syndrome caused by mutation in COX7B","type":"exact"}],"termid":"MONDO:0010474","xrefs":{"Monarch":{"xref_id":"0010474"}}}


id: GO:0030234
data:
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data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLI family zinc finger 4","termid":"PBO:0048685"}


id: PBO:0062014
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily L member 3","termid":"PBO:0062014"}


id: MONDO:0100414
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any acute myeloid leukemia that has the chromosomal anomaly CEBPA gene mutation. (Mutation of the CEBPA gene encoding CCAAT/enhancer binding protein alpha. It is seen in acute myeloid leukemias usually associated with a normal karyotype.)","definition_xrefs":["NCIT:C38372"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046","MONDO:0004992"],"is_obsolete":false,"name":"acute myeloid leukemia, CEBPA gene mutation","secondary_identifiers":["NCIT:C151898"],"synonyms":[{"name":"AML, C/EBP-Alpha Gene Mutation","type":"exact"},{"name":"AML, C/EBPalpha Mutation","type":"exact"},{"name":"AML, CCAAT Enhancer Binding Protein Alpha Gene Mutation","type":"exact"},{"name":"AML, CCAAT/Enhancer Binding Protein, Alpha Gene Mutation","type":"exact"},{"name":"AML, CEBP Gene Mutation","type":"exact"},{"name":"AML, CEBPA Mutation","type":"exact"},{"name":"AML, CEBPA gene mutation","type":"exact"}],"termid":"MONDO:0100414","xrefs":{"Monarch":{"xref_id":"0100414"}}}


id: GO:0009661
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of the chromoplast. A chromoplast is a plastid containing pigments other than chlorophyll, usually yellow and orange carotenoid pigments.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plastid organization","termid":"GO:0009657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chromoplast organization","synonyms":[{"name":"chromoplast organisation","type":"exact"},{"name":"chromoplast organization and biogenesis","type":"related"}],"termid":"GO:0009661"}


id: PBO:0055770
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long non-coding regulator of POU2F2","termid":"PBO:0055770"}


id: SO:0001018
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A binding site that, in the molecule, interacts selectively and non-covalently with antibodies, B cells or T cells.","definition_xrefs":["SO:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"binding_site","termid":"SO:0000409"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epitope","secondary_identifiers":["http://en.wikipedia.org/wiki/Epitope"],"termid":"SO:0001018"}


id: PBO:0065093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase AMP-activated non-catalytic subunit gamma 2","termid":"PBO:0065093"}


id: PBO:0038795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADAM metallopeptidase domain 1B (pseudogene)","termid":"PBO:0038795"}


id: GO:1905476
data:
  {"annotated_genes":["SJAG_03970","SJAG_04597","SJAG_02392"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90096],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042997"},{"annotations":[96419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140325"},{"annotations":[97866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903077"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of protein localization to membrane.","definition_xrefs":["GOC:PARL","GOC:TermGenie","GO_REF:0000058","GOC:bc","PMID:26911690"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cellular process","termid":"GO:0048523"},{"relation_name":"is_a","term_name":"negative regulation of protein localization","termid":"GO:1903828"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"negatively_regulates","term_name":"protein localization to membrane","termid":"GO:0072657"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02392":null,"SJAG_03970":null,"SJAG_04597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of protein localization to membrane","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein localisation in membrane","type":"exact"},{"name":"down regulation of protein localization in membrane","type":"exact"},{"name":"down regulation of protein localization to membrane","type":"exact"},{"name":"down-regulation of protein localisation in membrane","type":"exact"},{"name":"down-regulation of protein localization in membrane","type":"exact"},{"name":"down-regulation of protein localization to membrane","type":"exact"},{"name":"downregulation of protein localisation in membrane","type":"exact"},{"name":"downregulation of protein localization in membrane","type":"exact"},{"name":"downregulation of protein localization to membrane","type":"exact"},{"name":"inhibition of protein localisation in membrane","type":"narrow"},{"name":"inhibition of protein localization in membrane","type":"narrow"},{"name":"inhibition of protein localization to membrane","type":"narrow"},{"name":"negative regulation of protein localisation in membrane","type":"exact"},{"name":"negative regulation of protein localization in membrane","type":"exact"}],"termid":"GO:1905476","terms_by_termid":{"GO:0042997":null,"GO:0140325":null,"GO:1903077":null}}


id: PBO:0050239
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 17","termid":"PBO:0050239"}


id: PBO:0070823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene","termid":"PBO:0070823"}


id: MONDO:1010136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Vitiligo that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory disease, non-human animal","termid":"MONDO:1011327"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"autoimmune disease, non-human animal","termid":"MONDO:1012985"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitiligo, non-human animal","secondary_identifiers":["OMIA:001055"],"termid":"MONDO:1010136","xrefs":{"Monarch":{"xref_id":"1010136"}}}


id: PBO:0064711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peptidylprolyl isomerase A pseudogene 47","termid":"PBO:0064711"}


id: SO:0002375
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A gene that codes a C_D_box_snoRNA. Most box C/D snoRNAs also contain long (>10 nt) sequences complementary to rRNA. Boxes C and D, as well as boxes C' and D', are usually located in close proximity, and form a structure known as the box C/D motif. This motif is important for snoRNA stability, processing, nucleolar targeting and function. A small number of box C/D snoRNAs are involved in rRNA processing; most, however, are known or predicted to serve as guide RNAs in ribose methylation of rRNA. Targeting involves direct base pairing of the snoRNA at the rRNA site to be modified and selection of a rRNA nucleotide a fixed distance from box D or D'.","definition_xrefs":["PMID:12457565","PMID:22065625"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snoRNA_gene","termid":"SO:0001267"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C_D_box_snoRNA_gene","synonyms":[{"name":"box C/D snoRNA gene, C D box snoRNA gene, C/D box snoRNA gene","type":"exact"}],"termid":"SO:0002375"}


id: PBO:0081408
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 256","termid":"PBO:0081408"}


id: GO:0006385
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The extension of an RNA molecule after transcription initiation and promoter clearance at an RNA polymerase III promoter by the addition of ribonucleotides catalyzed by RNA polymerase III.","definition_xrefs":["GOC:txnOH","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA-templated transcription elongation","termid":"GO:0006354"},{"relation_name":"part_of","term_name":"transcription by RNA polymerase III","termid":"GO:0006383"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"part_of","termid":"GO:0006351"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006351","GO:0008150","GO:0010467"],"is_obsolete":false,"name":"transcription elongation by RNA polymerase III","secondary_identifiers":["Reactome:R-HSA-73780"],"synonyms":[{"name":"RNA elongation from Pol III promoter","type":"exact"},{"name":"RNA polymerase III transcription elongation factor activity","type":"related"},{"name":"transcription elongation by RNA polymerase III promoter","type":"exact"},{"name":"transcription elongation from RNA polymerase III promoter","type":"exact"}],"termid":"GO:0006385"}


id: PBO:0050595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7","termid":"PBO:0050595"}


id: GO:0033664
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which the symbiont activates, maintains or increases levels of defense-related proteins in its host. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host defense-related protein level (obsolete GO:0033664)","termid":"GO:0033664"}


id: GO:2000956
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of cyclodextrin metabolic process.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of cyclodextrin metabolic process (obsolete GO:2000956)","synonyms":[{"name":"positive regulation of cyclodextrin metabolism","type":"exact"}],"termid":"GO:2000956"}


id: SO:0000279
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A transcript that is bound by a protein.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"bound_by_protein","termid":"SO:0000875"},{"relation_name":"is_a","term_name":"transcript","termid":"SO:0000673"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcript_bound_by_protein","synonyms":[{"name":"transcript bound by protein","type":"exact"}],"termid":"SO:0000279"}


id: PBO:0075429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sperm adhesion molecule 1","termid":"PBO:0075429"}


id: GO:0052829
data:
  {"annotated_genes":["SJAG_01702"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[117607],"is_not":false,"summary":null,"term":"GO:0052829"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-myo-inositol 1,3,4-trisphosphate + H2O = myo-inositol 3,4-bisphosphate + phosphate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inositol trisphosphate phosphatase activity","termid":"GO:0046030"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01702":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"inositol-1,3,4-trisphosphate 1-phosphatase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1855232"],"termid":"GO:0052829","terms_by_termid":{"GO:0052829":null}}


id: GO:0030185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of nitric oxide, nitrogen monoxide, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"nitric oxide transport","termid":"GO:0030185"}


id: PR:Q09907
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An endonuclease III-like protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00443","PRO:DNx","PANTHER:PTHR10359:SF16"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endonuclease III homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC30D11.07","secondary_identifiers":["UniProtKB:Q09907"],"synonyms":[{"name":"DNA glycoslyase/AP lyase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-NTHL1","type":"exact"},{"name":"bifunctional DNA N-glycoslyase/DNA-(apurinic or apyrimidinic site) lyase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09907"}


id: PBO:0024834
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Beta Glucan Synthase","termid":"PBO:0024834"}


id: GO:0008172
data:
  {"annotated_genes":["SJAG_02290","SJAG_04425","SJAG_05693"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[65462],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0003871"},{"annotations":[78287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008898"},{"annotations":[111808],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0018708"}]},"cv_name":"molecular_function","definition":"Catalysis of the transfer of a methyl group to the sulfur atom of an acceptor molecule.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02290":null,"SJAG_04425":null,"SJAG_05693":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"S-methyltransferase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-209821"],"termid":"GO:0008172","terms_by_termid":{"GO:0003871":null,"GO:0008898":null,"GO:0018708":null}}


id: GO:0160067
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A SIN signaling complex associated with the new mitotic spindle pole body during anaphase and characterized by the presence activated (GTP bound) GTPase (Spg1 in fission yeast) to activate SIN signaling.","definition_xrefs":["PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"SIN/MEN signaling complex","termid":"GO:0160065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005816"},{"rel_name":"part_of","termid":"GO:0015630"}],"interesting_parent_ids":["GO:0032991","GO:0005816","GO:0015630","GO:0005575"],"is_obsolete":false,"name":"new spindle pole body SIN signaling complex","synonyms":[{"name":"new spindle pole body SIN signalling complex","type":"exact"}],"termid":"GO:0160067"}


id: MONDO:0002104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Conversion disorder is a disorder in which a person experiences blindness, paralysis, or other symptoms affecting the nervous system that cannot be explained solely by a physical illness or injury. Symptoms usually begin suddenly after a period of emotional or physical distress or psychological conflict. Conversion disorder is thought to be caused by the bodys reaction to a stressful physical or emotional event. Some research has identified potential neurological changes that may be related to symptoms of the disorder. Diagnosis of conversion disorder is based on identifying particular signs that are common among people with the disorder, as well as performing tests to rule out other causes of the symptoms. Treatment may include psychotherapy, hypnosis, and stress management training to help reduce symptoms. Treatment of any underlying psychological disorder is also recommended. The affected body part may require physical or occupational therapy until symptoms resolve.","direct_ancestors":[{"relation_name":"is_a","term_name":"somatoform disorder","termid":"MONDO:0003117"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"conversion disorder","secondary_identifiers":["UMLS:C0009946","DOID:1768","ICD9:300.11","MEDGEN:3230","MESH:D003291"],"synonyms":[{"name":"FND","type":"related"},{"name":"conversion hysteria or reaction","type":"exact"},{"name":"conversion hysterical neurosis","type":"exact"},{"name":"functional movement disorder","type":"related"},{"name":"functional neurological disorder","type":"related"},{"name":"hysterical neurosis, conversion type","type":"exact"}],"termid":"MONDO:0002104","xrefs":{"Monarch":{"xref_id":"0002104"}}}


id: GO:0044642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A process that begins with venom being forced into an organism by the bite or sting of another organism, and ends with the resultant modulation of complement activation via the alternative pathway in the bitten/stung organism.","definition_xrefs":["GOC:fj","GOC:jl","PMID:20837040"],"gene_count":0,"genotype_count":0,"name":"obsolete envenomation resulting in modulation of complement activation, alternative pathway in another organism (obsolete GO:0044642)","synonyms":[{"name":"envenomation resulting in modulation of complement activation, alternative pathway in other organism","type":"exact"},{"name":"envenomation resulting in regulation of complement activation, alternative pathway in other organism","type":"exact"}],"termid":"GO:0044642"}


id: PR:P0CT42
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-7 gene.","definition_xrefs":["UniProtKB:P0CT42","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-7 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13D1.01c","synonyms":[{"name":"Spom972h-Tf2-7","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT42"}


id: PBO:0041778
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain small subunit 1 pseudogene 1","termid":"PBO:0041778"}


id: GO:0042098
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a T cell population by cell division. Follows T cell activation.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T cell activation","termid":"GO:0042110"},{"relation_name":"is_a","term_name":"lymphocyte proliferation","termid":"GO:0046651"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T cell proliferation","secondary_identifiers":["GO:0042111"],"synonyms":[{"name":"T lymphocyte proliferation","type":"exact"},{"name":"T-cell proliferation","type":"exact"},{"name":"T-lymphocyte proliferation","type":"exact"}],"termid":"GO:0042098"}


id: MONDO:0009007
data:
  {"annotated_genes":["SJAG_04111"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87314],"is_not":false,"summary":null,"term":"MONDO:0009007"}]},"cv_name":"mondo","definition":"Jalili syndrome is characterized by the association of amelogenesis imperfecta (AI) and cone-rod retinal dystrophy (CORD).","definition_xrefs":["Orphanet:1873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04111":null},"genotype_count":0,"is_obsolete":false,"name":"Jalili syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:707608003","ICD9:362.75","ICD9:520.5","ICD10CM:H35.5","MESH:C000596385","DOID:0111404","GARD:1463","OMIM:217080","MEDGEN:501210","UMLS:C3495589"],"synonyms":[{"name":"Jalili syndrome","type":"exact"},{"name":"cone rod dystrophy-amelogenesis imperfecta syndrome","type":"exact"},{"name":"cone-rod dystrophy amelogenesis imperfecta","type":"related"},{"name":"cone-rod dystrophy and amelogenesis imperfecta","type":"related"},{"name":"cone-rod dystrophy with amelogenesis imperfecta","type":"related"}],"termid":"MONDO:0009007","terms_by_termid":{"MONDO:0009007":null},"xrefs":{"Monarch":{"xref_id":"0009007"}}}


id: GO:0072142
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of a juxtaglomerulus cell over time, from its formation to the mature structure.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell development","termid":"GO:0048468"},{"relation_name":"part_of","term_name":"juxtaglomerulus cell differentiation","termid":"GO:0072052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"juxtaglomerulus cell development","termid":"GO:0072142"}


id: GO:0032467
data:
  {"annotated_genes":["SJAG_04597","SJAG_03704","SJAG_00845","SJAG_01114","SJAG_04468","SJAG_03581","SJAG_03342","SJAG_05290","SJAG_03936","SJAG_03631","SJAG_01188","SJAG_04776","SJAG_02392","SJAG_01787","SJAG_00514","SJAG_00082","SJAG_02838","SJAG_04666","SJAG_01805"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92008,96421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903501"},{"annotations":[96422,112575,115420,96592,89535],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903473"},{"annotations":[112819,121443,92778,105716],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903617"},{"annotations":[91880,108416,117534,79886,109078,94428,95815,115421,107209,119955],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140281"},{"annotations":[89536,94429,96425],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905758"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the division of the cytoplasm of a cell, and its separation into two daughter cells.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokinesis","termid":"GO:0032465"},{"relation_name":"is_a","term_name":"positive regulation of cell division","termid":"GO:0051781"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"cytokinesis","termid":"GO:0000910"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00082":null,"SJAG_00514":null,"SJAG_00845":null,"SJAG_01114":null,"SJAG_01188":null,"SJAG_01787":null,"SJAG_01805":null,"SJAG_02392":null,"SJAG_02838":null,"SJAG_03342":null,"SJAG_03581":null,"SJAG_03631":null,"SJAG_03704":null,"SJAG_03936":null,"SJAG_04468":null,"SJAG_04597":null,"SJAG_04666":null,"SJAG_04776":null,"SJAG_05290":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of cytokinesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"PMID:25866389":null},"secondary_identifiers":["GO:0071777"],"synonyms":[{"name":"activation of cytokinesis","type":"narrow"},{"name":"positive regulation of cell cycle cytokinesis","type":"related"},{"name":"stimulation of cytokinesis","type":"narrow"},{"name":"up regulation of cytokinesis","type":"exact"},{"name":"up-regulation of cytokinesis","type":"exact"},{"name":"upregulation of cytokinesis","type":"exact"}],"termid":"GO:0032467","terms_by_termid":{"GO:0140281":null,"GO:1903473":null,"GO:1903501":null,"GO:1903617":null,"GO:1905758":null}}


id: SO:1000062
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The nucleotide change in the codon triplet creates a terminator codon.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000062 sequence_variant_causing_nonsense_codon_change_in_transcript (obsolete SO:1000062)","synonyms":[{"name":"mutation causing nonsense codon change in transcript","type":"related"},{"name":"sequence variant causing nonsense codon change in transcript","type":"exact"}],"termid":"SO:1000062"}


id: GO:0070740
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the posttranslational transfer of one or more glutamate residues to the gamma-carboxyl group(s) of one or more specific glutamate residues on a tubulin molecule.","definition_xrefs":["PMID:19524510","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-glutamic acid ligase activity","termid":"GO:0070739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0140096","GO:0016874","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"tubulin-glutamic acid ligase activity","secondary_identifiers":["Reactome:R-HSA-8865774","Reactome:R-HSA-8955869","EC:6.3.2.61"],"synonyms":[{"name":"tubulin glutamylase activity","type":"exact"},{"name":"tubulin-glutamate ligase activity","type":"exact"}],"termid":"GO:0070740"}


id: MONDO:1011776
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"inborn error of hepatic metabolism, non-human animal","secondary_identifiers":["OMIA:000561"],"termid":"MONDO:1011776","xrefs":{"Monarch":{"xref_id":"1011776"}}}


id: PBO:0077807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TOX high mobility group box family member 4 pseudogene 1","termid":"PBO:0077807"}


id: PBO:0065165
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein C, inactivator of coagulation factors Va and VIIIa","termid":"PBO:0065165"}


id: GO:0050198
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: trans-cinnamoyl-CoA + 3 H+ + 3 malonyl-CoA = 4 CO2 + 4 CoA + pinosylvin.","definition_xrefs":["EC:2.3.1.146","RHEA:12552"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0003674","GO:0016746","GO:0016740","GO:0003824"],"is_obsolete":false,"name":"pinosylvin synthase activity","secondary_identifiers":["MetaCyc:PINOSYLVIN-SYNTHASE-RXN","KEGG_REACTION:R02505"],"synonyms":[{"name":"malonyl-CoA:cinnamoyl-CoA malonyltransferase (cyclizing)","type":"related"},{"name":"pine stilbene synthase activity","type":"related"},{"name":"stilbene synthase activity","type":"broad"}],"termid":"GO:0050198"}


id: PBO:0047720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 11, pseudogene","termid":"PBO:0047720"}


id: GO:0102748
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: H+ + geranylgeranyl-chlorophyll a + NADPH = dihydrogeranylgeranyl-chlorophyll a + NADP.","definition_xrefs":["EC:1.3.1.-","GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete geranylgeranyl-chlorophyll a reductase activity (obsolete GO:0102748)","termid":"GO:0102748"}


id: MONDO:0001942
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An anxiety disorder characterized by excessive and difficult-to-control worry about a number of life situations. The worry is accompanied by restlessness, fatigue, inability to concentrate, irritability, muscle tension, and/or sleep disturbance and lasts for at least 6 months.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anxiety disorder","termid":"MONDO:0005618"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized anxiety disorder","secondary_identifiers":["ICD9:300.02","ICD10CM:F41.1","SCTID:21897009","EFO:1001892","MEDGEN:452363","UMLS:C0270549","NCIT:C92622","DOID:14320"],"synonyms":[{"name":"GAD","type":"exact"}],"termid":"MONDO:0001942","xrefs":{"Monarch":{"xref_id":"0001942"}}}


id: PBO:0075561
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPG21 abhydrolase domain containing, maspardin","termid":"PBO:0075561"}


id: PBO:0052212
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"KCNQ5 intronic transcript 1","termid":"PBO:0052212"}


id: PBO:0110033
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HSP90AB1 associated lncRNA 1","termid":"PBO:0110033"}


id: PBO:0017971
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc18 protein half-life 5 minutes","termid":"PBO:0017971"}


id: GO:1904889
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of excitatory synapse assembly.","definition_xrefs":["GOC:PARL","GOC:bf","GO_REF:0000058","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of synapse assembly","termid":"GO:0051963"},{"relation_name":"regulates","term_name":"excitatory synapse assembly","termid":"GO:1904861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of excitatory synapse assembly","synonyms":[{"name":"regulation of excitatory synapse formation","type":"exact"}],"termid":"GO:1904889"}


id: PBO:0045810
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EEF1A1 antisense RNA 1","termid":"PBO:0045810"}


id: PBO:0087987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA:pseudouridine synthase; introduces pseudouridines at position 38 or 39 in tRNA; also responsible for pseudouracil modification of some mRNAs; important for maintenance of translation efficiency and normal cell growth, localizes to both the nucleus and cytoplasm; non-essential for viability","termid":"PBO:0087987"}


id: MONDO:0027069
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex 5 (ATP synthase) deficiency, mitochondrial type 1","secondary_identifiers":["DOID:0111748","OMIM:500015","UMLS:C3275684","MEDGEN:477315"],"synonyms":[{"name":"MC5DM1","type":"exact"},{"name":"mitochondrial complex V (ATP synthase) deficiency, mitochondrial type 1","type":"exact"}],"termid":"MONDO:0027069","xrefs":{"Monarch":{"xref_id":"0027069"}}}


id: FYPO:0003478
data:
  {"alleles_by_uniquename":{"SJAG_01330:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01330","name":"mad2delta","uniquename":"SJAG_01330:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121323,121242],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004318"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype that affects signal transduction. Signal transduction is the process in which a signal is conveyed to trigger a change in the activity or state of a cell. It begins with reception of a signal and ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. A phenotype may affect one or more steps in one or more signal transduction pathways.","definition_xrefs":["GO:0007165","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation phenotype","termid":"FYPO:0000145"},{"relation_name":"is_a","term_name":"cellular response phenotype","termid":"FYPO:0000298"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01330":null},"genotype_count":1,"genotypes_by_uniquename":{"mad2delta":{"display_name":"mad2delta","display_uniquename":"mad2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01330:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000298","FYPO:0000002"],"is_obsolete":false,"name":"signal transduction phenotype","references_by_uniquename":{"PMID:21802294":null,"PMID:32109380":null},"single_locus_annotated_genes":["SJAG_01330"],"single_locus_genotype_uniquenames":["mad2delta"],"synonyms":[{"name":"fission yeast signal transduction phenotype","type":"exact"}],"termid":"FYPO:0003478","terms_by_termid":{"FYECO:0000162":null,"FYPO:0004318":null}}


id: FYPO:0006361
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which dimethylation of lysine at position 9 of histone H3 in heterochromatin at subtelomeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:29214404","PMID:26438724"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 dimethylation during vegetative growth","termid":"FYPO:0000873"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"increased histone H3-K9 dimethylation at subtelomeric heterochromatin during vegetative growth","synonyms":[{"name":"increased histone H3 K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at subtelomeres during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 dimethylation at subtelomeric heterochromatin during mitotic cell cycle","type":"related"},{"name":"increased histone H3-K9 dimethylation at telomeric heterochromatin during vegetative growth","type":"related"},{"name":"increased histone H3K9me2 at subtelomeric heterochromatin during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 dimethylation at subtelomeric heterochromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0006361"}


id: GO:0031917
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that decreases synaptic metaplasticity. Metaplasticity is a higher-order form of plasticity and is manifest as a change in the ability to induce subsequent synaptic plasticity that is the ability of synapses to change as circumstances require.","definition_xrefs":["PMID:8658594","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of synaptic plasticity","termid":"GO:0031914"},{"relation_name":"is_a","term_name":"regulation of synaptic metaplasticity","termid":"GO:0031916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of synaptic metaplasticity","synonyms":[{"name":"down regulation of synaptic metaplasticity","type":"exact"},{"name":"down-regulation of synaptic metaplasticity","type":"exact"},{"name":"downregulation of synaptic metaplasticity","type":"exact"},{"name":"inhibition of synaptic metaplasticity","type":"narrow"}],"termid":"GO:0031917"}


id: MONDO:0012657
data:
  {"annotated_genes":["SJAG_01067"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87467],"is_not":false,"summary":null,"term":"MONDO:0012657"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01067":null},"genotype_count":0,"is_obsolete":false,"name":"Mungan syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:369554","MESH:C548078","OMIM:611376","UMLS:C1969653"],"synonyms":[{"name":"MGS","type":"exact"},{"name":"MUNGAN syndrome","type":"exact"},{"name":"pseudoobstruction chronic idiopathic intestinal with Barrett esophagus and cardiac abnormalities","type":"related"},{"name":"pseudoobstruction chronic idiopathic intestinal with Barrett oesophagus and cardiac abnormalities","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, with Barrett esophagus and Cardiac abnormalities","type":"related"},{"name":"pseudoobstruction, chronic idiopathic intestinal, with Barrett oesophagus and Cardiac abnormalities","type":"related"},{"name":"visceral Neuromyopathy, familial, with pseudoobstruction, Megaduodenum, Barrett esophagus, and Cardiac abnormalities","type":"related"},{"name":"visceral neuromyopathy familial with pseudoobstruction megaduodenum Barrett esophagus and cardiac abnormalities","type":"related"},{"name":"visceral neuromyopathy familial with pseudoobstruction megaduodenum Barrett oesophagus and cardiac abnormalities","type":"related"}],"termid":"MONDO:0012657","terms_by_termid":{"MONDO:0012657":null},"xrefs":{"Monarch":{"xref_id":"0012657"}}}


id: MONDO:0007149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete arbitrary restriction polymorphism 1 (obsolete MONDO:0007149)","secondary_identifiers":["OMIM:107750"],"synonyms":[{"name":"Arp-14A","type":"related"},{"name":"Rflp-14A","type":"related"},{"name":"anonymous restriction polymorphism 1","type":"related"},{"name":"arbitrary restriction polymorphism 1","type":"exact"},{"name":"arbitrary restriction polymorphism type 1","type":"exact"},{"name":"restriction fragment length polymorphism 14A","type":"related"}],"termid":"MONDO:0007149","xrefs":{"Monarch":{"xref_id":"0007149"}}}


id: GO:0160169
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The protein coat that surrounds the infective nucleic acid in some virus particles where the subunits (capsomeres) are arranged to form an icosahedron with T=21 or pseudo T=21 symmetry.","definition_xrefs":["VZ:833"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosahedral viral capsid","termid":"GO:0019030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"T=21/pseudo21 icosahedral capsid","termid":"GO:0160169"}


id: PBO:0068761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U5F small nuclear 6, pseudogene","termid":"PBO:0068761"}


id: MONDO:0030883
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"carpal tunnel syndrome","termid":"MONDO:0007275"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0005244"],"is_obsolete":false,"name":"carpal tunnel syndrome 2","secondary_identifiers":["OMIM:619161","MEDGEN:1725962","DOID:0070467","UMLS:C5436916"],"synonyms":[{"name":"CTS2","type":"exact"},{"name":"carpal tunnel syndrome 2","type":"exact"}],"termid":"MONDO:0030883","xrefs":{"Monarch":{"xref_id":"0030883"}}}


id: PR:O74471
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cox13 gene.","definition_xrefs":["UniProtKB:O74471","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 6A, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1739.09c","synonyms":[{"name":"Spom972h-cox13","type":"exact"},{"name":"cytochrome c oxidase polypeptide VIa (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74471"}


id: GO:1904186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly ofa post-anaphase microtubule array.","definition_xrefs":["PMID:15004232","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component organization","termid":"GO:0016043"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-anaphase microtubule array organization","synonyms":[{"name":"PAA organization","type":"exact"},{"name":"post-anaphase array organization","type":"exact"},{"name":"post-anaphase microtubule array organisation","type":"exact"}],"termid":"GO:1904186"}


id: MONDO:0019922
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paternal uniparental disomy of chromosome 7 is an uniparental disomy of paternal origin that most likely do not have any phenotypic expression except from cases of homozygosity for a recessive disease mutation for which only father is a carrier (e.g., cystic fibrosis, congenital chloride diarrhea, sensorineural hearing loss).","definition_xrefs":["Orphanet:96192"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 7 disorder","termid":"MONDO:0700014"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal uniparental disomy of chromosome 7","secondary_identifiers":["UMLS:C4707802","SCTID:766721001","icd11.foundation:1517671165","MEDGEN:1634443","GARD:19341"],"synonyms":[{"name":"UPD(7)pat","type":"exact"},{"name":"paternal uniparental disomy of chromosome type 7","type":"exact"}],"termid":"MONDO:0019922","xrefs":{"Monarch":{"xref_id":"0019922"}}}


id: PR:P49731
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication licensing factor MCM6 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11630:SF43","OMA:SCHPO03891"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication licensing factor mcm6 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC211.04c","secondary_identifiers":["UniProtKB:P49731"],"synonyms":[{"name":"Spom972h-MCM6","type":"exact"},{"name":"minichromosome maintenance protein 6 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P49731"}


id: MONDO:0016448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pseudoxanthoma elasticum-like papillary dermal elastolysis (PXE-PDE) is a rare, acquired, idiopathic dermal tissue disorder characterized by numerous, asymptomatic, 2-3 mm, yellowish, non-follicular papules that tend to converge into cobblestone-like plaques which are distributed symmetrically over the posterior neck, supraclavicular region, axillae, and sometimes abdomen. Unlike PXE, these skin lesions show select elimination (absence or marked loss) of elastic fibers in the papillary dermis and there is no systemic involvement.","definition_xrefs":["Orphanet:228293"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin disorder","termid":"MONDO:0005093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"pseudoxanthoma elasticum-like papillary dermal elastolysis","secondary_identifiers":["GARD:20588","icd11.foundation:704601885","MEDGEN:1638395","UMLS:C4049455","SCTID:764105002"],"synonyms":[{"name":"PXE-PDE","type":"exact"},{"name":"PXE-like papillary dermal elastolysis","type":"exact"}],"termid":"MONDO:0016448","xrefs":{"Monarch":{"xref_id":"0016448"}}}


id: MONDO:0015057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renin-angiotensin-aldosterone system (RAAS)-blocker induced angioedema (RAE) is a type of acquired angioedema (AAE) characterized by acute edema in subcutaneous tissues, viscera and/or the upper airway.","definition_xrefs":["Orphanet:100057"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired angioedema","termid":"MONDO:0019624"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"renin-angiotensin-aldosterone system-blocker-induced angioedema","secondary_identifiers":["UMLS:C1304495","MEDGEN:725846","MESH:C535293","SCTID:403607004","GARD:16936"],"synonyms":[{"name":"AEACEI","type":"related"},{"name":"RAE","type":"exact"},{"name":"Raas-blocker-induced angioedema","type":"exact"},{"name":"Raas-blocker-induced angioneurotic edema","type":"exact"},{"name":"Raas-blocker-induced angioneurotic oedema","type":"exact"},{"name":"angioedema induced by ACE inhibitors, susceptibility to","type":"related"},{"name":"reactive angioendotheliomatosis","type":"related"},{"name":"renin-angiotensin-aldosterone system-blocker-induced angioneurotic edema","type":"exact"},{"name":"renin-angiotensin-aldosterone system-blocker-induced angioneurotic oedema","type":"exact"},{"name":"susceptibility to angioedema induced by ace inhibitors","type":"related"}],"termid":"MONDO:0015057","xrefs":{"Monarch":{"xref_id":"0015057"}}}


id: PBO:0031574
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-small_vegetative_cell","termid":"PBO:0031574"}


id: MONDO:0013848
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any familial isolated dilated cardiomyopathy in which the cause of the disease is a mutation in the GATAD1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial isolated dilated cardiomyopathy","termid":"MONDO:0700335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"dilated cardiomyopathy 2B","secondary_identifiers":["MEDGEN:766323","GARD:15832","DOID:0110441","OMIM:614672","UMLS:C3553409"],"synonyms":[{"name":"CMD2B","type":"exact"},{"name":"GATAD1 familial isolated dilated cardiomyopathy","type":"exact"},{"name":"cardiomyopathy, dilated, 2B","type":"related"},{"name":"cardiomyopathy, dilated, type 2B","type":"exact"},{"name":"dilated cardiomyopathy 2B","type":"exact"},{"name":"dilated cardiomyopathy type 2B","type":"exact"},{"name":"familial isolated dilated cardiomyopathy caused by mutation in GATAD1","type":"exact"}],"termid":"MONDO:0013848","xrefs":{"Monarch":{"xref_id":"0013848"}}}


id: PBO:0032712
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_error-free_translesion_synthesis_of_cyclobutane_pyrimidine_dimers","termid":"PBO:0032712"}


id: PATO:0000646
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A morphological quality inhering in a bearer by virtue of the bearer's being distorted during formation.","definition_xrefs":["PATOC:MAH"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deformed","termid":"PATO:0001617"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malformed","synonyms":[{"name":"malformation","type":"narrow"}],"termid":"PATO:0000646"}


id: PBO:0056213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member B10","termid":"PBO:0056213"}


id: PBO:0084887
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial thioredoxin reductase; involved in protection against oxidative stress, required with Glr1p to maintain the redox state of Trx3p; contains active-site motif (CAVC) present in prokaryotic orthologs; binds NADPH and FAD; TRR2 has a paralog, TRR1, that arose from the whole genome duplication","termid":"PBO:0084887"}


id: GO:0019884
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an antigen-presenting cell expresses antigen (peptide or lipid) of exogenous origin on its cell surface in association with an MHC protein complex.","definition_xrefs":["PMID:15928678","GOC:add","ISBN:0781735149","PMID:15771591"],"direct_ancestors":[{"relation_name":"is_a","term_name":"antigen processing and presentation","termid":"GO:0019882"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"antigen processing and presentation of exogenous antigen","synonyms":[{"name":"antigen presentation, exogenous antigen","type":"exact"}],"termid":"GO:0019884"}


id: FYPO:0002290
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the phosphorylation of one or more specific proteins is normal during a cellular response to osmotic stress.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein phosphorylation during vegetative growth","termid":"FYPO:0000776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal protein phosphorylation during cellular response to osmotic stress","synonyms":[{"name":"normal protein phosphorylation during cellular response to osmotic stress during mitotic cell cycle","type":"related"},{"name":"normal protein phosphorylation during cellular response to osmotic stress during vegetative growth","type":"exact"}],"termid":"FYPO:0002290"}


id: PBO:0034613
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_nucleosome_occupancy_at_centromere_central_core","termid":"PBO:0034613"}


id: GO:0044728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of adding or removing a methyl group from one or more nucleotides within an DNA molecule.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA methylation or demethylation (obsolete GO:0044728)","synonyms":[{"name":"changes in DNA methylation","type":"related"}],"termid":"GO:0044728"}


id: PBO:0077134
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIPIN pseudogene 1","termid":"PBO:0077134"}


id: MONDO:0018037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition that is characterized by elevated serum IgE, dermatitis, and respiratory infections.","definition_xrefs":["NCIT:C3144"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hyperimmunoglobulin syndrome","termid":"MONDO:0002468"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"hyper-IgE syndrome","secondary_identifiers":["icd11.foundation:223461798","GARD:10956","DOID:0080545","UMLS:C3887645","MEDGEN:854488","NANDO:1200340","NANDO:2200713","Orphanet:331223","OMIMPS:147060"],"synonyms":[{"name":"HIES","type":"exact"},{"name":"hyper-IgE recurrent infection syndrome","type":"exact"},{"name":"hyperimmunoglobulin E syndrome","type":"exact"}],"termid":"MONDO:0018037","xrefs":{"Monarch":{"xref_id":"0018037"}}}


id: GO:1902125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of (+)-pinoresinol.","definition_xrefs":["PMID:8910615","GOC:TermGenie","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phenol-containing compound catabolic process","termid":"GO:0019336"},{"relation_name":"is_a","term_name":"lignan catabolic process","termid":"GO:0046273"},{"relation_name":"is_a","term_name":"ether catabolic process","termid":"GO:1901502"},{"relation_name":"is_a","term_name":"(+)-pinoresinol metabolic process","termid":"GO:1902124"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-pinoresinol catabolic process","synonyms":[{"name":"(+)-pinoresinol breakdown","type":"exact"},{"name":"(+)-pinoresinol catabolism","type":"exact"},{"name":"(+)-pinoresinol degradation","type":"exact"}],"termid":"GO:1902125"}


id: GO:0021825
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process where neuronal precursors migrate tangentially in the cerebral cortex, primarily guided through physical cell-cell interactions.","definition_xrefs":["GOC:jid","GO_REF:0000021","GOC:dgh","GOC:dph","GOC:cls"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substrate-dependent cell migration","termid":"GO:0006929"},{"relation_name":"is_a","term_name":"cerebral cortex tangential migration","termid":"GO:0021800"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"substrate-dependent cerebral cortex tangential migration","termid":"GO:0021825"}


id: PATO:0001531
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A cellular quality that exists by virtue of the disposition of the cell to adhere to other cells and molecules, through the emergent action of the molecular parts of the cell surface.","definition_xrefs":["PATOC:cjm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular quality","termid":"PATO:0001396"},{"relation_name":"is_a","term_name":"adhesivity","termid":"PATO:0001431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cellular adhesivity","termid":"PATO:0001531"}


id: GO:0032233
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the assembly of actin filament bundles.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of actin filament bundle assembly","termid":"GO:0032231"},{"relation_name":"is_a","term_name":"positive regulation of cellular component biogenesis","termid":"GO:0044089"},{"relation_name":"is_a","term_name":"positive regulation of cytoskeleton organization","termid":"GO:0051495"},{"relation_name":"is_a","term_name":"positive regulation of supramolecular fiber organization","termid":"GO:1902905"},{"relation_name":"positively_regulates","term_name":"actin filament bundle assembly","termid":"GO:0051017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0030036"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007010","GO:0008150","GO:0030036","GO:0044085"],"is_obsolete":false,"name":"positive regulation of actin filament bundle assembly","synonyms":[{"name":"activation of actin filament bundle formation","type":"narrow"},{"name":"stimulation of actin filament bundle formation","type":"narrow"},{"name":"up regulation of actin filament bundle formation","type":"exact"},{"name":"up-regulation of actin filament bundle formation","type":"exact"},{"name":"upregulation of actin filament bundle formation","type":"exact"}],"termid":"GO:0032233"}


id: MONDO:0000637
data:
  {"annotated_genes":["SJAG_03905","SJAG_05979","SJAG_01748","SJAG_01013","SJAG_04287","SJAG_01349","SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89372,89216,89218,89373,89215,89217],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018874"},{"annotations":[88146],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0002629"}]},"cv_name":"mondo","definition":"A malignant neoplasm involving the musculoskeletal system","direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder","termid":"MONDO:0002081"},{"relation_name":"is_a","term_name":"cancer","termid":"MONDO:0004992"}],"gene_count":7,"genes_by_uniquename":{"SJAG_01013":null,"SJAG_01349":null,"SJAG_01748":null,"SJAG_03453":null,"SJAG_03905":null,"SJAG_04287":null,"SJAG_05979":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"musculoskeletal system cancer","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0060100","NCIT:C166357","MEDGEN:1714562","UMLS:C0036210"],"synonyms":[{"name":"cancer of musculoskeletal system","type":"exact"},{"name":"malignant musculoskeletal system neoplasm","type":"exact"},{"name":"malignant neoplasm of musculoskeletal system","type":"exact"},{"name":"musculoskeletal system cancer","type":"exact"},{"name":"skeletal system cancer","type":"related"}],"termid":"MONDO:0000637","terms_by_termid":{"MONDO:0002629":null,"MONDO:0018874":null},"xrefs":{"Monarch":{"xref_id":"0000637"}}}


id: MONDO:0012149
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"excluded_subClassOf","term_name":"attention deficit-hyperactivity disorder","termid":"MONDO:0007743"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"attention deficit-hyperactivity disorder, susceptibility to, 1","secondary_identifiers":["UMLS:C1837153","MEDGEN:323087","OMIM:608903"],"synonyms":[{"name":"ADHD1","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, 1","type":"exact"},{"name":"attention deficit-hyperactivity disorder, susceptibility to, type 1","type":"exact"}],"termid":"MONDO:0012149","xrefs":{"Monarch":{"xref_id":"0012149"}}}


id: PBO:0039775
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aquaporin 7B","termid":"PBO:0039775"}


id: PBO:0058124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4426","termid":"PBO:0058124"}


id: MONDO:0006920
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition in which blood glucose levels are high, but not high enough to be classified as type 2 diabetes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"diabetes mellitus","termid":"MONDO:0005015"},{"relation_name":"is_a","term_name":"glucose metabolism disease","termid":"MONDO:0002908"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"prediabetes syndrome","secondary_identifiers":["DOID:11716","UMLS:C0362046","EFO:1001121","MedDRA:10065542","MEDGEN:83928","MESH:D011236","NCIT:C122685"],"synonyms":[{"name":"borderline diabetes","type":"exact"},{"name":"prediabetes","type":"exact"},{"name":"prediabetic state","type":"exact"}],"termid":"MONDO:0006920","xrefs":{"Monarch":{"xref_id":"0006920"}}}


id: PBO:0083537
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified ORF YBR131W; identified by gene-trapping, microarray analysis, and genome-wide homology searches","termid":"PBO:0083537"}


id: MONDO:0017718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete mitochondrial disorder due to a defect in assembly or maturation of the respiratory chain complexes (obsolete MONDO:0017718)","secondary_identifiers":["NANDO:2200522","Orphanet:309136"],"termid":"MONDO:0017718","xrefs":{"Monarch":{"xref_id":"0017718"}}}


id: PBO:0013002
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curator_name","termid":"PBO:0013002"}


id: GO:0009972
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The removal of amino group in the presence of water.","definition_xrefs":["GOC:sm"],"gene_count":0,"genotype_count":0,"name":"obsolete cytidine deamination (obsolete GO:0009972)","termid":"GO:0009972"}


id: PBO:0027873
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_cellular_response_to_UV","termid":"PBO:0027873"}


id: PBO:0068028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 333","termid":"PBO:0068028"}


id: PR:O13767
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC17A5.05c gene.","definition_xrefs":["UniProtKB:O13767","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C17A5.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC17A5.05c","synonyms":[{"name":"Spom972h-SPAC17A5.05c","type":"exact"}],"termid":"PR:O13767"}


id: GO:0042978
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binds to and increases ornithine decarboxylase activity.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enzyme activator activity","termid":"GO:0008047"},{"relation_name":"is_a","term_name":"ornithine decarboxylase regulator activity","termid":"GO:0042979"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0030234","GO:0003674"],"is_obsolete":false,"name":"ornithine decarboxylase activator activity","synonyms":[{"name":"L-ornithine carboxy-lyase activator activity","type":"narrow"}],"termid":"GO:0042978"}


id: PBO:0075686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SRC proto-oncogene, non-receptor tyrosine kinase","termid":"PBO:0075686"}


id: PBO:0031268
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_cellular_response_to_stress","termid":"PBO:0031268"}


id: MONDO:0013524
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete bleeding diathesis due to thromboxane synthesis deficiency (obsolete MONDO:0013524)","termid":"MONDO:0013524","xrefs":{"Monarch":{"xref_id":"0013524"}}}


id: GO:0031517
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The function of absorbing and responding to electromagnetic radiation with a wavelength of approximately 660nm. The response may involve a change in conformation.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"red or far-red light photoreceptor activity","termid":"GO:0009883"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0038023"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"red light photoreceptor activity","termid":"GO:0031517"}


id: FYPO:0006147
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA transcribed from early meiotic genes measured in a cell is lower than normal during a cellular response to copper ion starvation during the meiotic cell cycle. Early meiotic genes are normally transcribed during pre-meiotic S phase and recombination.","definition_xrefs":["PomBase:mah","PMID:24569997","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level during meiotic cell cycle","termid":"FYPO:0004630"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0006551"],"is_obsolete":false,"name":"decreased level of early meiotic gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","synonyms":[{"name":"decreased level of early meiosis gene mRNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene RNA during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"},{"name":"decreased level of early meiotic gene transcripts during cellular response to copper ion starvation during meiotic cell cycle","type":"exact"}],"termid":"FYPO:0006147"}


id: PBO:0036324
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase assembly factor Coa2 (predicted)","termid":"PBO:0036324"}


id: FYPO:0003061
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the two nuclei in a zygote formed by conjugation with cellular fusion undergo meiosis before karyogamy with nuclear fusion is completed.","definition_xrefs":["PomBase:mah","PMID:23755176","PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal meiosis","termid":"FYPO:0000051"},{"relation_name":"is_a","term_name":"abnormal meiotic cell cycle entry","termid":"FYPO:0009006"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0000631","FYPO:0001985"],"is_obsolete":false,"name":"meiotic cell cycle in zygote with unfused nuclei","synonyms":[{"name":"haploid meiosis before karyogamy","type":"exact"},{"name":"twin haploid meiotic nuclear division","type":"exact"}],"termid":"FYPO:0003061"}


id: FYPO:0005721
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is curved (i.e. follows a smooth bend rather than a straight line) during anaphase B.","definition_xrefs":["PomBase:mah","PMID:15147872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"},{"relation_name":"is_a","term_name":"abnormal spindle morphology","termid":"FYPO:0003607"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000054","FYPO:0001320","FYPO:0000120","FYPO:0000002","FYPO:0002399","FYPO:0001985"],"is_obsolete":false,"name":"curved mitotic spindle during anaphase B","synonyms":[{"name":"curved bipolar mitotic spindle during anaphase B","type":"exact"},{"name":"curved mitotic spindle during anaphase B during vegetative growth","type":"exact"},{"name":"curved mitotic spindles during anaphase B","type":"exact"},{"name":"curved spindle during anaphase B of mitosis","type":"exact"},{"name":"curved spindle during mitotic anaphase B","type":"exact"}],"termid":"FYPO:0005721"}


id: PBO:0047595
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarate hydratase","termid":"PBO:0047595"}


id: PBO:0070295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNY1 pseudogene 1","termid":"PBO:0070295"}


id: GO:2000936
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cellotriose catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate catabolic process","termid":"GO:0043470"},{"relation_name":"regulates","term_name":"cellotriose catabolic process","termid":"GO:2000894"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of cellotriose catabolic process","synonyms":[{"name":"regulation of cellotriose catabolism","type":"exact"}],"termid":"GO:2000936"}


id: MONDO:0015198
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Aniridia - ptosis - intellectual disability - familial obesity is an extremely rare syndrome described in three members of a family (a mother and her two children) that is characterized by the association of various ocular abnormalities (partial or complete aniridia, ptosis, pendular nystagmus, corneal pannus, persistent pupillary membrane, lenticular opacities, foveal hypoplasia, and low visual acuity) with various systemic anomalies including intellectual disability and obesity in the two children, and alopecia, cardiac abnormalities, and frequent spontaneous abortion in the mother. There have been no further descriptions in the literature since 1986.","definition_xrefs":["Orphanet:1067"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"aniridia-ptosis-intellectual disability-familial obesity syndrome","secondary_identifiers":["UMLS:C4303736","MEDGEN:929405","GARD:689","SCTID:720987001"],"synonyms":[{"name":"aniridia - ptosis - intellectual disability - familial obesity","type":"related"}],"termid":"MONDO:0015198","xrefs":{"Monarch":{"xref_id":"0015198"}}}


id: GO:0018717
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9-phenanthrol + glucose = 9-phenanthryl-beta-D-glucopyranoside + H2O.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 9-phenanthrol glycosyltransferase activity (obsolete GO:0018717)","termid":"GO:0018717"}


id: GO:0042179
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of nicotine, (S)(-)-3-(1-methyl-2-pyrrolidinyl)pyridine.","definition_xrefs":["ISBN:0198547684","GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"nicotine metabolic process","termid":"GO:0018933"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nicotine biosynthetic process","synonyms":[{"name":"nicotine anabolism","type":"exact"},{"name":"nicotine biosynthesis","type":"exact"},{"name":"nicotine formation","type":"exact"},{"name":"nicotine synthesis","type":"exact"}],"termid":"GO:0042179"}


id: PBO:0063073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAPLN antisense RNA 1","termid":"PBO:0063073"}


id: GO:0030474
data:
  {"annotated_genes":["SJAG_03200","SJAG_01760","SJAG_03544","SJAG_04003","SJAG_04558"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[109464,114900,114697,117185,92137],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903087"}]},"cv_name":"biological_process","definition":"Construction of a new spindle pole body.","definition_xrefs":["GOC:clt"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"spindle pole body organization","termid":"GO:0051300"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01760":null,"SJAG_03200":null,"SJAG_03544":null,"SJAG_04003":null,"SJAG_04558":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0007049","GO:0007010","GO:0044085","GO:0000226","GO:0008150"],"is_obsolete":false,"name":"spindle pole body duplication","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0031046","GO:0007103"],"synonyms":[{"name":"spindle pole body assembly","type":"exact"},{"name":"spindle pole body biogenesis","type":"exact"},{"name":"spindle pole body biosynthesis","type":"exact"},{"name":"spindle pole body duplication associated with nuclear envelope","type":"exact"},{"name":"spindle pole body duplication in cytoplasm","type":"exact"},{"name":"spindle pole body formation","type":"exact"},{"name":"spindle pole body replication","type":"exact"}],"termid":"GO:0030474","terms_by_termid":{"GO:1903087":null}}


id: GO:0061280
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of epithelial cells within a renal tubule that contributes to mesonephric proximal tubule morphogenesis.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell migration involved in mesonephric nephron tubule morphogenesis","termid":"GO:0061278"},{"relation_name":"is_a","term_name":"epithelial cell migration involved in proximal tubule morphogenesis","termid":"GO:0072159"},{"relation_name":"part_of","term_name":"mesonephric proximal tubule morphogenesis","termid":"GO:0061276"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epithelial cell migration involved in mesonephric proximal tubule morphogenesis","termid":"GO:0061280"}


id: RO:0002559
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_material_entities","termid":"RO:0002506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_influenced_by","termid":"RO:0002559"}


id: GO:0052409
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways performed by an organism involving cellulose in the cell wall of a second organism, where the two organisms are in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete metabolism by organism of cell wall cellulose in other organism involved in symbiotic interaction (obsolete GO:0052409)","synonyms":[{"name":"metabolism by organism of cell wall cellulose in other organism during symbiotic interaction","type":"related"}],"termid":"GO:0052409"}


id: GO:0071198
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A voltage-gated potassium channel complex that contains the peptidase-related protein DPP6 associated with the channel via interaction with the Kv alpha subunit 4.1.","definition_xrefs":["PMID:15911355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"voltage-gated potassium channel complex","termid":"GO:0008076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"Kv4.1-DPP6 channel complex","secondary_identifiers":["CORUM:600"],"synonyms":[{"name":"Kv4.1-DPPX channel complex","type":"exact"}],"termid":"GO:0071198"}


id: MOD:00576
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Other","definition_xrefs":["PubMed:11283024","Unimod:253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Unimod","termid":"MOD:00003"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"crotonaldehyde","synonyms":[{"name":"Crotonaldehyde","type":"related"}],"termid":"MOD:00576"}


id: GO:0072186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the metanephric cap are generated and organized. The metanephric cap is formed by the condensation of metanephric mesenchymal cells surrounding the ureteric bud tip.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metanephric mesenchyme morphogenesis","termid":"GO:0072133"},{"relation_name":"part_of","term_name":"metanephric cap development","termid":"GO:0072185"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"metanephric cap morphogenesis","termid":"GO:0072186"}


id: GO:0032197
data:
  {"annotated_genes":["SJAG_00769"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[118600],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0141005"}]},"cv_name":"biological_process","definition":"A type of transposition in which a transposable element (transposon) copies and pastes itself into a different genomic location by transcription and convertsion of the transcribed RNA back into DNA through reverse transcription.","definition_xrefs":["ISBN:1555812090","PMID:30416149","PMID:30958115","PMID:32588192","PMID:26912865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transposition","termid":"GO:0032196"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00769":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"retrotransposition","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0006319","GO:0006322","Wikipedia:Transposon##Class_I\\:_Retrotransposons","GO:0006320","GO:0006321"],"synonyms":[{"name":"Class I transposition","type":"exact"},{"name":"RNA-mediated transposition","type":"exact"},{"name":"Tf transposition","type":"narrow"},{"name":"Ty element transposition","type":"narrow"},{"name":"Ty1 element transposition","type":"narrow"},{"name":"Ty2 element transposition","type":"narrow"},{"name":"Ty3 element transposition","type":"narrow"},{"name":"retrotransposon transposition","type":"exact"},{"name":"transposition via RNA intermediate","type":"exact"},{"name":"transposition, RNA-mediated","type":"exact"}],"termid":"GO:0032197","terms_by_termid":{"GO:0141005":null}}


id: PR:Q9UTS5-1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A zinc finger protein zas1 (Schizosaccharomyces pombe 972h-) that is a translation product of some mRNA giving rise to a protein with the amino acid sequence represented by UniProtKB:Q9UTS5-1.","definition_xrefs":["PRO:DNx","UniProtKB:Q9UTS5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"zinc finger protein zas1 (Schizosaccharomyces pombe 972h-)","termid":"PR:Q9UTS5"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein zas1 isoform 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1002.01","secondary_identifiers":["UniProtKB:Q9UTS5-1"],"synonyms":[{"name":"Spom972h-zas1/iso:1","type":"exact"},{"name":"zinc finger protein zas1 isoform zas1B (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTS5-1"}


id: PBO:0069654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 931, pseudogene","termid":"PBO:0069654"}


id: PBO:0111808
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SR family","termid":"PBO:0111808"}


id: PR:O94377
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- atp17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94377"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase subunit f, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.11","synonyms":[{"name":"Spom972h-atp17","type":"exact"}],"termid":"PR:O94377"}


id: PBO:0077554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 260","termid":"PBO:0077554"}


id: PR:O14214
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA methyltransferase 10 homolog A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR13563:SF6","OMA:SCHPO01012"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA (guanine(9)-N1)-methyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.09","secondary_identifiers":["UniProtKB:O14214"],"synonyms":[{"name":"Spom972h-TRMT10A","type":"exact"},{"name":"tRNA methyltransferase 10 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)-methyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA(m1G9)MTase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14214"}


id: GO:0070168
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of biomineral tissue development, the formation of hard tissues that consist mainly of inorganic compounds.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"is_a","term_name":"regulation of biomineral tissue development","termid":"GO:0070167"},{"relation_name":"negatively_regulates","term_name":"biomineral tissue development","termid":"GO:0031214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of biomineral tissue development","termid":"GO:0070168"}


id: PBO:0076396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcriptional adaptor 3","termid":"PBO:0076396"}


id: MONDO:0025699
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Coffin-Siris syndrome","termid":"MONDO:0015452"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coffin-Siris syndrome 12","secondary_identifiers":["MEDGEN:1782096","GARD:16443","UMLS:C5444111","OMIM:619325","DOID:0112370"],"synonyms":[{"name":"CSS12","type":"exact"}],"termid":"MONDO:0025699","xrefs":{"Monarch":{"xref_id":"0025699"}}}


id: PR:O14193
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug69 gene.","definition_xrefs":["UniProtKB:O14193","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 69 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC56E4.05","synonyms":[{"name":"Spom972h-mug69","type":"exact"}],"termid":"PR:O14193"}


id: PBO:0004636
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alkB homolog/2-OG-Fe(II) oxygenase family (predicted)","termid":"PBO:0004636"}


id: PR:G2TRR2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC32F12.17 gene.","definition_xrefs":["PRO:DNx","UniProtKB:G2TRR2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transmembrane protein C32F12.17 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32F12.17","synonyms":[{"name":"Spom972h-SPBC32F12.17","type":"exact"}],"termid":"PR:G2TRR2"}


id: PBO:0053292
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIM domain kinase 2","termid":"PBO:0053292"}


id: MONDO:0009973
data:
  {"annotated_genes":["SJAG_02038"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87625],"is_not":false,"summary":null,"term":"MONDO:0009973"}]},"cv_name":"mondo","definition":"Reticular dysgenesis is the most severe form of severe combined immunodeficiency (SCID) and is characterized by bilateral sensorineural deafness and a lack of innate and adaptive immune functions leading to fatal septicemia within days after birth if not treated.","definition_xrefs":["Orphanet:33355"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-B- severe combined immunodeficiency","termid":"MONDO:0017855"},{"relation_name":"is_a","term_name":"familial severe combined immunodeficiency","termid":"MONDO:0031520"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02038":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"reticular dysgenesis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0272167","SCTID:111584000","GARD:8625","NANDO:2200695","DOID:0060020","MESH:C538361","NANDO:1200322","NCIT:C27070","OMIM:267500","MEDGEN:124417"],"synonyms":[{"name":"AK2 deficiency","type":"exact"},{"name":"De Vaal disease","type":"exact"},{"name":"DeVaal disease","type":"related"},{"name":"RD","type":"related"},{"name":"SCID with leukopenia","type":"exact"},{"name":"aleukocytosis","type":"related"},{"name":"congenital Aleukia","type":"related"},{"name":"congenital aleukocytosis","type":"exact"},{"name":"generalised haematopoietic hypoplasia","type":"exact"},{"name":"generalized hematopoietic hypoplasia","type":"exact"},{"name":"haematopoietic hypoplasia, generalised","type":"related"},{"name":"hematopoietic hypoplasia, generalized","type":"related"},{"name":"reticular Dysgenesia","type":"related"},{"name":"reticular dysgenesis","type":"exact"},{"name":"severe combined immunodeficiency with leukopenia","type":"exact"}],"termid":"MONDO:0009973","terms_by_termid":{"MONDO:0009973":null},"xrefs":{"Monarch":{"xref_id":"0009973"}}}


id: PBO:0087567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of telomeric Ku complex (Yku70p-Yku80p); involved in telomere length maintenance, structure and telomere position effect; required for localization of telomerase ribonucleoprotein via interaction with TLC1 guide RNA; relocates to sites of double-strand cleavage to promote nonhomologous end joining during DSB repair; colocalizes with quiescent cell telomere hyperclusters","termid":"PBO:0087567"}


id: PBO:0083501
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene YOR136W; null mutant displays increased levels of spontaneous Rad52 foci","termid":"PBO:0083501"}


id: MONDO:0700250
data:
  {"annotated_genes":["SJAG_03046"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89219],"is_not":false,"summary":null,"term":"MONDO:0700250"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex IV deficiency, nuclear-type","termid":"MONDO:0033885"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03046":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex IV deficiency, nuclear type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0070491","GARD:15158","UMLS:C5435656","OMIM:220110","MEDGEN:1750917"],"termid":"MONDO:0700250","terms_by_termid":{"MONDO:0700250":null},"xrefs":{"Monarch":{"xref_id":"0700250"}}}


id: PBO:0054866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2280","termid":"PBO:0054866"}


id: MONDO:0030919
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 53","secondary_identifiers":["UMLS:C4540481","MEDGEN:1623344","DOID:0080228","GARD:16473","EFO:0009165","OMIM:617798"],"synonyms":[{"name":"MRD53","type":"related"},{"name":"autosomal dominant intellectual disability 53","type":"related"},{"name":"autosomal dominant mental retardation 53","type":"related"},{"name":"intellectual disability, autosomal dominant 53","type":"exact"},{"name":"mental retardation, autosomal dominant 53","type":"related"}],"termid":"MONDO:0030919","xrefs":{"Monarch":{"xref_id":"0030919"}}}


id: MONDO:0007388
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital shortness of the costocoracoid ligament is a rare anomaly characterized by fixation of the scapula to the first rib, resulting in a cosmetic deformity with rounding of the shoulders and loss of the anterior clavicular contour.","definition_xrefs":["Orphanet:2391"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenitally short costocoracoid ligament","secondary_identifiers":["MEDGEN:342257","OMIM:122580","GARD:1551","MESH:C536448","SCTID:725101002","UMLS:C1852523"],"synonyms":[{"name":"congenital shortness of the costocoracoid ligament","type":"related"},{"name":"costocoracoid ligament congenitally short","type":"related"},{"name":"costocoracoid ligament, congenitally short","type":"related"},{"name":"fixation of the scapula to the first rib by a congenitally short costocoracoid ligament","type":"related"}],"termid":"MONDO:0007388","xrefs":{"Monarch":{"xref_id":"0007388"}}}


id: PBO:0075169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein D3 polypeptide","termid":"PBO:0075169"}


id: PBO:0032743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF2B epsilon subunit","termid":"PBO:0032743"}


id: GO:1901080
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of relaxation of smooth muscle.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of relaxation of muscle","termid":"GO:1901077"},{"relation_name":"regulates","term_name":"relaxation of smooth muscle","termid":"GO:0044557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of relaxation of smooth muscle","synonyms":[{"name":"regulation of smooth muscle relaxation","type":"exact"}],"termid":"GO:1901080"}


id: GO:0004476
data:
  {"annotated_genes":["SJAG_02648"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[79933],"is_not":false,"summary":null,"term":"GO:0004476"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: D-mannose 6-phosphate = D-fructose 6-phosphate.","definition_xrefs":["RHEA:12356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting aldoses and ketoses","termid":"GO:0016861"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02648":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016853","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"mannose-6-phosphate isomerase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:MANNPISOM-RXN","Reactome:R-HSA-3781832","EC:5.3.1.8","Reactome:R-HSA-532549"],"synonyms":[{"name":"D-mannose-6-phosphate aldose-ketose-isomerase activity","type":"related"},{"name":"D-mannose-6-phosphate ketol-isomerase activity","type":"related"},{"name":"mannose phosphate isomerase activity","type":"related"},{"name":"phosphohexoisomerase activity","type":"broad"},{"name":"phosphohexomutase activity","type":"broad"},{"name":"phosphomannoisomerase activity","type":"related"},{"name":"phosphomannose isomerase activity","type":"related"}],"termid":"GO:0004476","terms_by_termid":{"GO:0004476":null}}


id: PBO:0041732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium/calmodulin dependent protein kinase IV","termid":"PBO:0041732"}


id: GO:0017186
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of peptidyl-pyroglutamic acid, catalyzed by glutaminyl-peptide cyclotransferase.","definition_xrefs":["RESID:AA0031"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-glutamine modification","termid":"GO:0018199"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"peptidyl-pyroglutamic acid biosynthetic process, using glutaminyl-peptide cyclotransferase","synonyms":[{"name":"2-pyrrolidone-5-carboxylic acid biosynthesis","type":"exact"},{"name":"2-pyrrolidone-5-carboxylic acid biosynthetic process","type":"exact"},{"name":"peptidyl-pyroglutamic acid anabolism, using glutaminyl-peptide cyclotransferase","type":"exact"},{"name":"peptidyl-pyroglutamic acid formation, using glutaminyl-peptide cyclotransferase","type":"exact"},{"name":"peptidyl-pyroglutamic acid synthesis, using glutaminyl-peptide cyclotransferase","type":"exact"}],"termid":"GO:0017186"}


id: PBO:0091434
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements E. coli alkA/tag double mutant","termid":"PBO:0091434"}


id: GO:0044546
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form the NLRP3 inflammasome complex, occurring at the level of an individual cell.","definition_xrefs":["GOC:jl","PMID:21048113"],"direct_ancestors":[{"relation_name":"is_a","term_name":"canonical inflammasome complex assembly","termid":"GO:0140632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0065003","GO:0023052","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"NLRP3 inflammasome complex assembly","synonyms":[{"name":"NALP3 inflammasome complex assembly","type":"exact"},{"name":"NLRP3 inflammasome activation","type":"related"}],"termid":"GO:0044546"}


id: PBO:0041140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTF3 divergent transcript","termid":"PBO:0041140"}


id: GO:0050466
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of an oxidation-reduction (redox) reaction in which X-H and Y-H form X-Y and the acceptor is not disulfide or oxygen.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors (obsolete GO:0050466)","synonyms":[{"name":"oxidoreductase activity, acting on X-H and Y-H to form an X-Y bond, with other acceptors","type":"exact"}],"termid":"GO:0050466"}


id: GO:0061700
data:
  {"annotated_genes":["SJAG_04496","SJAG_02424","SJAG_00561","SJAG_00209","SJAG_03907"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77345,90025,90316,91422,108600],"is_not":false,"summary":null,"term":"GO:0061700"}]},"cv_name":"cellular_component","definition":"A multiprotein subcomplex of the GATOR complex that regulates TORC1 signaling by interacting with the Rag GTPase. In human, this complex consists of WDR24, WDR59, MIOS, SEH1L, and SEC13. In S. cerevisiae, this complex is referred to as SEACAT and contains the Sea2p, Sea3p, Sea4p, Seh1p, Sec13p proteins.","definition_xrefs":["GOC:krc","GOC:rb","PMID:25934700","PMID:23723238"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"Seh1-associated complex","termid":"GO:0035859"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00209":null,"SJAG_00561":null,"SJAG_02424":null,"SJAG_03907":null,"SJAG_04496":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"GATOR2 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"SEACAT complex","type":"exact"}],"termid":"GO:0061700","terms_by_termid":{"GO:0061700":null}}


id: MONDO:0007146
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete apnea, central sleep (obsolete MONDO:0007146)","termid":"MONDO:0007146","xrefs":{"Monarch":{"xref_id":"0007146"}}}


id: PBO:0071556
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L35a pseudogene 21","termid":"PBO:0071556"}


id: MONDO:0012369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 6","secondary_identifiers":["MEDGEN:332086","OMIM:609939","UMLS:C1835919"],"synonyms":[{"name":"SLEB6","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 6","type":"exact"}],"termid":"MONDO:0012369","xrefs":{"Monarch":{"xref_id":"0012369"}}}


id: PBO:0088076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-specific protease that cleaves ubiquitin-protein fusions; UBP9 has a paralog, UBP13, that arose from the whole genome duplication","termid":"PBO:0088076"}


id: PBO:0005470
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CtIP-related endonuclease","termid":"PBO:0005470"}


id: GO:0052321
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of phytoalexin metabolism, the chemical reactions and pathways involving phytoalexins.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phytoalexin metabolic process (obsolete GO:0052321)","synonyms":[{"name":"down regulation of phytoalexin metabolism","type":"exact"},{"name":"down-regulation of phytoalexin metabolism","type":"exact"},{"name":"downregulation of phytoalexin metabolism","type":"exact"},{"name":"inhibition of phytoalexin metabolism","type":"narrow"},{"name":"negative regulation of phytoalexin metabolism","type":"exact"}],"termid":"GO:0052321"}


id: GO:0015988
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The transport of protons across a membrane and against an electrochemical gradient, using energy from a source such as ATP hydrolysis, light, or electron transport.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proton transmembrane transport","termid":"GO:1902600"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"energy coupled proton transmembrane transport, against electrochemical gradient","termid":"GO:0015988"}


id: GO:1904682
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 3-methylcholanthrene stimulus.","definition_xrefs":["GO_REF:0000071","GOC:mr","GOC:TermGenie","PMID:9224771"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to polycyclic arene","termid":"GO:1903166"},{"relation_name":"is_a","term_name":"response to 3-methylcholanthrene","termid":"GO:1904681"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to 3-methylcholanthrene","termid":"GO:1904682"}


id: PBO:0058498
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5692a-1","termid":"PBO:0058498"}


id: PBO:0029326
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_histone_H2A_phosphorylation_at_mating_type_locus_during_mitotic_S_phase","termid":"PBO:0029326"}


id: PBO:0087402
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Stretch-activated Ca2+-permeable cation channel; required for Ca2+ influx stimulated by mating pheromones and some abiotic stresses; sensor of compressive mechanical stress; N-glycosylated membrane protein of the ER and plasma membrane; interacts with Cch1p; oligomerizes; is an alpha2/delta-like protein and participates in the generation of stretch-activated Ca2+-permeable cation channel activity when expressed in mammalian cells","termid":"PBO:0087402"}


id: PBO:0057936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3662","termid":"PBO:0057936"}


id: PBO:0056318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitogen-activated protein kinase kinase kinase 4","termid":"PBO:0056318"}


id: PBO:0068280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease H1 pseudogene 1","termid":"PBO:0068280"}


id: GO:0140723
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of patulin, an acetate-derived tetraketide mycotoxin produced by several fungal species that shows antimicrobial properties against several bacteria.","definition_xrefs":["PMID:30680886","PMID:25120234"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0044281","GO:0008150"],"is_obsolete":false,"name":"patulin biosynthetic process","synonyms":[{"name":"patulin anabolism","type":"exact"},{"name":"patulin biosynthesis","type":"exact"},{"name":"patulin formation","type":"exact"},{"name":"patulin synthesis","type":"exact"}],"termid":"GO:0140723"}


id: PBO:0063744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHB1 pseudogene 9","termid":"PBO:0063744"}


id: PBO:0068832
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 70, pseudogene","termid":"PBO:0068832"}


id: GO:0045848
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of nitrogen utilization.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nitrogen utilization","termid":"GO:0006808"},{"relation_name":"is_a","term_name":"positive regulation of response to nutrient levels","termid":"GO:0032109"},{"relation_name":"positively_regulates","term_name":"nitrogen utilization","termid":"GO:0019740"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of nitrogen utilization","synonyms":[{"name":"activation of nitrogen utilization","type":"narrow"},{"name":"stimulation of nitrogen utilization","type":"narrow"},{"name":"up regulation of nitrogen utilization","type":"exact"},{"name":"up-regulation of nitrogen utilization","type":"exact"},{"name":"upregulation of nitrogen utilization","type":"exact"}],"termid":"GO:0045848"}


id: GO:0005804
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete secretory vesicle membrane (obsolete GO:0005804)","synonyms":[{"name":"secretory vesicle membrane","type":"exact"}],"termid":"GO:0005804"}


id: PBO:0005467
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteinase B inhibitor Pbi2 (predicted)","termid":"PBO:0005467"}


id: PBO:0080353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 2 receptor 7 pseudogene","termid":"PBO:0080353"}


id: PBO:0035847
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K9_methylation_at_heterochromatin_domain_during_vegetative_growth","termid":"PBO:0035847"}


id: GO:1904138
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of convergent extension involved in notochord morphogenesis.","definition_xrefs":["PMID:24892953","GOC:TermGenie","GOC:dph","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of convergent extension involved in gastrulation","termid":"GO:1904105"},{"relation_name":"is_a","term_name":"regulation of convergent extension involved in notochord morphogenesis","termid":"GO:1904136"},{"relation_name":"positively_regulates","term_name":"convergent extension involved in notochord morphogenesis","termid":"GO:1904126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of convergent extension involved in notochord morphogenesis","synonyms":[{"name":"activation of convergent extension involved in notochord morphogenesis","type":"narrow"},{"name":"up regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"up-regulation of convergent extension involved in notochord morphogenesis","type":"exact"},{"name":"upregulation of convergent extension involved in notochord morphogenesis","type":"exact"}],"termid":"GO:1904138"}


id: GO:0030540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the female genitalia over time, from formation to the mature structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia development","termid":"GO:0048806"},{"relation_name":"part_of","term_name":"female sex differentiation","termid":"GO:0046660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female genitalia development","synonyms":[{"name":"female genital development","type":"exact"}],"termid":"GO:0030540"}


id: MONDO:1010659
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Thrombocytopenia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thrombocytopenia, non-human animal","termid":"MONDO:1010080"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"thrombocytopenia, dog","secondary_identifiers":["OMIA:001001-9615"],"termid":"MONDO:1010659","xrefs":{"Monarch":{"xref_id":"1010659"}}}


id: PBO:0120087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EXOC1 antisense RNA 1","termid":"PBO:0120087"}


id: GO:0071393
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a progesterone stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to progesterone","termid":"GO:0032570"},{"relation_name":"is_a","term_name":"cellular response to steroid hormone stimulus","termid":"GO:0071383"},{"relation_name":"is_a","term_name":"cellular response to ketone","termid":"GO:1901655"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to progesterone stimulus","termid":"GO:0071393"}


id: MONDO:0004136
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm of the ovary characterized by the presence of cystic structures lined by endometrial-type well-differentiated cells.","definition_xrefs":["NCIT:C40075"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ovarian cystadenoma","termid":"MONDO:0005183"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometrioid cystadenoma","secondary_identifiers":["DOID:7191","MEDGEN:309509","UMLS:C1518713"],"synonyms":[{"name":"ovarian endometrioid cystadenoma","type":"exact"}],"termid":"MONDO:0004136","xrefs":{"Monarch":{"xref_id":"0004136"}}}


id: PBO:0017938
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-hydroxyacyl-CoA dehydratase involved in very long-chain fatty acid elongation Phs1 (predicted)","termid":"PBO:0017938"}


id: FYPO:0001032
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of camptothecin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to camptothecin","synonyms":[{"name":"resistance to camptothecin during mitotic cell cycle","type":"related"},{"name":"resistance to camptothecin during vegetative growth","type":"exact"},{"name":"resistant to CPT","type":"exact"},{"name":"resistant to camptothecin","type":"exact"}],"termid":"FYPO:0001032"}


id: FYPO:0005254
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing tamoxifen.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0002057","FYPO:0000139","FYPO:0000003","FYPO:0000257","FYPO:0002058"],"is_obsolete":false,"name":"normal growth on tamoxifen","synonyms":[{"name":"normal cell population growth in presence of tamoxifen","type":"exact"},{"name":"normal cell population growth on tamoxifen","type":"exact"},{"name":"normal cellular response to tamoxifen","type":"related"},{"name":"normal vegetative cell population growth on tamoxifen","type":"exact"}],"termid":"FYPO:0005254"}


id: GO:0030104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process involved in the maintenance of an internal steady state of water within an organism or cell.","definition_xrefs":["GOC:mah","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete water homeostasis (obsolete GO:0030104)","secondary_identifiers":["Wikipedia:Osmoregulation"],"synonyms":[{"name":"osmoregulation","type":"related"},{"name":"regulation of osmotic pressure","type":"exact"}],"termid":"GO:0030104"}


id: MONDO:0001867
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An opportunistic fungal infection caused by any of a variety of normally saprophytic fungi with hyaline hyphal elements. For example, Fusarium spp. infect neutropenic patients to cause pneumonia, fungemia, and disseminated infection with cutaneous lesions.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"primary systemic mycosis","termid":"MONDO:0000308"},{"relation_name":"is_a","term_name":"opportunistic mycosis","termid":"MONDO:0002312"},{"relation_name":"is_a","term_name":"alternariosis","termid":"MONDO:0044083"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phaeohyphomycosis","secondary_identifiers":["SCTID:47158003","ICD9:117.8","MESH:D060446","icd11.foundation:547567937","MEDGEN:452374","UMLS:C0276721","DOID:14049"],"synonyms":[{"name":"infection by dematiacious fungi","type":"exact"},{"name":"infection by dematiacious fungi [Phaehyphomycosis]","type":"exact"},{"name":"phaehyphomycosis","type":"exact"}],"termid":"MONDO:0001867","xrefs":{"Monarch":{"xref_id":"0001867"}}}


id: GO:0070013
data:
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