# terms

id: PBO:0084822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial protein, putative acetyltransferase; similar to bacterial galactoside O-acetyltransferases; induced by oleate in OAF1/PIP2-dependent manner; promoter contains oleate response element consensus sequence; non-essential gene","termid":"PBO:0084822"}


id: MONDO:0018347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete severe intellectual disability-progressive postnatal microcephaly- midline stereotypic hand movements syndrome (obsolete MONDO:0018347)","termid":"MONDO:0018347","xrefs":{"Monarch":{"xref_id":"0018347"}}}


id: PBO:0064338
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipid transfer protein","termid":"PBO:0064338"}


id: GO:0019957
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a C-C chemokine; C-C chemokines do not have an amino acid between the first two cysteines of the characteristic four-cysteine motif.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemokine binding","termid":"GO:0019956"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0005515"],"is_obsolete":false,"name":"C-C chemokine binding","termid":"GO:0019957"}


id: PBO:0045076
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DLG associated protein 3","termid":"PBO:0045076"}


id: MONDO:1011895
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Guillain-Barr-like polyradiculoneuropathy, non-human animal","secondary_identifiers":["OMIA:002062"],"termid":"MONDO:1011895","xrefs":{"Monarch":{"xref_id":"1011895"}}}


id: PBO:0073141
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEC22 homolog B4, pseudogene","termid":"PBO:0073141"}


id: PR:Q9P3U4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- dbl4 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P3U4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"E3 ubiquitin-protein ligase dbl4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC328.02","synonyms":[{"name":"DNA-break-localizing protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-dbl4","type":"exact"},{"name":"histone E3 ligase 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P3U4"}


id: GO:0061522
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction 1,4-dihydroxy-2-naphthoyl-CoA + H2O = 1,4-dihydroxy-2-naphthoate + CoA + H+.","definition_xrefs":["RHEA:26309"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyl-CoA hydrolase activity","termid":"GO:0016289"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016788"}],"interesting_parent_ids":["GO:0016788","GO:0003674","GO:0003824","GO:0016787"],"is_obsolete":false,"name":"1,4-dihydroxy-2-naphthoyl-CoA thioesterase activity","secondary_identifiers":["EC:3.1.2.28"],"termid":"GO:0061522"}


id: SO:0001085
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Different sources report differing sequences.","definition_xrefs":["EBIBS:GAR","UniProt:curation_manual"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_sequencing_information","termid":"SO:0001082"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sequence_conflict","secondary_identifiers":["BS:00069"],"synonyms":[{"name":"conflict","type":"exact"}],"termid":"SO:0001085"}


id: PR:O94583
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC1442.11c gene.","definition_xrefs":["PRO:DNx","UniProtKB:O94583"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1442.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1442.11c","synonyms":[{"name":"Spom972h-SPCC1442.11c","type":"exact"}],"termid":"PR:O94583"}


id: GO:0000988
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a protein or protein complex, to modulate transcription. A protein binding transcription factor may or may not also interact with the template nucleic acid (either DNA or RNA) as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, protein binding (obsolete GO:0000988)","synonyms":[{"name":"protein binding transcription factor activity","type":"exact"},{"name":"transcription factor activity","type":"broad"}],"termid":"GO:0000988"}


id: GO:0055121
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of the detection of a high fluence blue light stimulus by the blue high-fluence system. Blue light is electromagnetic radiation with a wavelength of between 440 and 500nm. The blue high-fluence system responds to blue light at levels between 100 and 1000 micromols/m2.","definition_xrefs":["GOC:mtg_far_red"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to blue light","termid":"GO:0009637"},{"relation_name":"is_a","term_name":"response to high light intensity","termid":"GO:0009644"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to high fluence blue light stimulus by blue high-fluence system","synonyms":[{"name":"response to high fluence blue light","type":"broad"},{"name":"response to high fluence blue light by bhf system","type":"related"}],"termid":"GO:0055121"}


id: GO:0039540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont interferes with, inhibits or disrupts a cytoplasmic pattern recognition receptor signaling pathway by inhibiting the activity of RIG-1 (also known as DDX58). The cytoplasmic pattern recognition RIG-I recognizes viral RNA synthesized during active viral replication and signals to protect the host against viral infection, for example by inducing the expression of antiviral cytokines.","definition_xrefs":["PMID:19454348","PMID:26138103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated suppression of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039537"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated suppression of host cytoplasmic pattern recognition receptor signaling pathway via inhibition of RIG-I activity","secondary_identifiers":["GO:0039538","VZ:856"],"synonyms":[{"name":"inhibition by virus of host DDX58 activity","type":"related"},{"name":"inhibition by virus of host RIG-I","type":"related"},{"name":"inhibition by virus of host RIG-I signaling","type":"related"},{"name":"inhibition of host DDX58/RIG-I by virus","type":"exact"},{"name":"suppression by virus of host DDX58 signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-I activity","type":"related"},{"name":"suppression by virus of host RIG-I signaling pathway","type":"related"},{"name":"suppression by virus of host RIG-I signalling pathway","type":"exact"},{"name":"suppression by virus of host viral-induced cytoplasmic pattern recognition receptor signaling pathway via inhibition of host RIG-I activity","type":"narrow"},{"name":"symbiont-mediated suppression of host RIG-I signaling pathway","type":"related"}],"termid":"GO:0039540"}


id: FYPO:0004166
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the amount of oxygen consumed by cells in a given time is higher than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular metabolism phenotype during vegetative growth","termid":"FYPO:0001348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased oxygen consumption during vegetative growth","synonyms":[{"name":"increased oxygen consumption during mitotic cell cycle","type":"related"},{"name":"increased oxygen uptake during vegetative growth","type":"related"}],"termid":"FYPO:0004166"}


id: MONDO:0005689
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Physical and psychological dependence on the drug cannabis.","definition_xrefs":["NCIT:C34445"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"substance abuse","termid":"MONDO:0002491"},{"relation_name":"excluded_subClassOf","term_name":"hallucinogen dependence","termid":"MONDO:0004939"},{"relation_name":"is_a","term_name":"drug dependence","termid":"MONDO:0005303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cannabis dependence","secondary_identifiers":["DOID:1849","ICD9:304.3","ICD10CM:F12.2","icd11.foundation:1129015467","MEDGEN:14303","SCTID:37344009","UMLS:C0006870","ICD9:305.2","DOID:9505","ICD9:304.30","MESH:D002189","SCTID:85005007","EFO:0007191"],"synonyms":[{"name":"cannabis abuse","type":"exact"},{"name":"marijuana abuse","type":"exact"},{"name":"marijuana dependence","type":"exact"}],"termid":"MONDO:0005689","xrefs":{"Monarch":{"xref_id":"0005689"}}}


id: RO:0002506
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","direct_ancestors":[{"relation_name":"is_a","term_name":"causally_related_to","termid":"RO:0002410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causal_relation_between_material_entities","termid":"RO:0002506"}


id: MONDO:0044235
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete hsr (obsolete MONDO:0044235)","secondary_identifiers":["OMIM:139900"],"synonyms":[{"name":"HSR","type":"related"},{"name":"Handedness","type":"exact"},{"name":"hand skill, relative","type":"related"},{"name":"handedness","type":"related"}],"termid":"MONDO:0044235","xrefs":{"Monarch":{"xref_id":"0044235"}}}


id: PBO:0089545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytoplasmic translation associated GTP binding protein Gtp1","termid":"PBO:0089545"}


id: PR:O94612
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cyclin-related protein FAM58A that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized cyclin-L1-like protein C1296.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1296.05c","secondary_identifiers":["UniProtKB:O94612"],"synonyms":[{"name":"Spom972h-FAM58A","type":"exact"}],"termid":"PR:O94612"}


id: PBO:0004038
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SNARE Tgl1 (predicted)","termid":"PBO:0004038"}


id: GO:0018311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of N4-hydroxymethyl-L-asparagine from other compounds, including peptidyl-asparagine.","definition_xrefs":["RESID:AA0236"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-N4-hydroxymethyl-L-asparagine biosynthetic process from peptidyl-asparagine (obsolete GO:0018311)","synonyms":[{"name":"peptidyl-N4-hydroxymethyl-L-asparagine anabolism from peptidyl-asparagine","type":"exact"},{"name":"peptidyl-N4-hydroxymethyl-L-asparagine formation from peptidyl-asparagine","type":"exact"},{"name":"peptidyl-N4-hydroxymethyl-L-asparagine synthesis from peptidyl-asparagine","type":"exact"}],"termid":"GO:0018311"}


id: GO:0042922
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to one or more specific sites on a neuromedin U receptor.","definition_xrefs":["GOC:jl","PMID:10899166"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuropeptide receptor binding","termid":"GO:0071855"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"neuromedin U receptor binding","termid":"GO:0042922"}


id: GO:0052183
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a host organism destabilizes a cellular component of a symbiont organism. The symbiont is defined as the smaller of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete disruption of symbiont cellular component (obsolete GO:0052183)","synonyms":[{"name":"degradation of symbiont cellular component by organism","type":"related"},{"name":"disassembly by host of symbiont cellular component","type":"narrow"},{"name":"disruption by host of symbiont cellular component","type":"related"},{"name":"disruption by host of symbiont structure","type":"exact"},{"name":"modification by host of symbiont cellular component","type":"exact"},{"name":"modification by host of symbiont structure","type":"broad"},{"name":"perturbation of symbiont cellular component","type":"exact"}],"termid":"GO:0052183"}


id: MONDO:0022178
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 13 disorder","termid":"MONDO:0700020"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 13q-mosaicism","secondary_identifiers":["MEDGEN:443931","MESH:C535486","UMLS:C2930915"],"synonyms":[{"name":"Mosiacism of chromosome 13q","type":"related"}],"termid":"MONDO:0022178","xrefs":{"Monarch":{"xref_id":"0022178"}}}


id: PBO:0120443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HYDIN antisense RNA 1","termid":"PBO:0120443"}


id: PBO:0076673
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testicular cell adhesion molecule 1, pseudogene","termid":"PBO:0076673"}


id: GO:0005199
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"The action of a molecule that contributes to the structural integrity of a cell wall.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"structural molecule activity","termid":"GO:0005198"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005198"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005198","GO:0003674"],"is_obsolete":false,"name":"structural constituent of cell wall","termid":"GO:0005199"}


id: GO:1990605
data:
  {"annotated_genes":["SJAG_05214"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[98078],"is_not":false,"summary":null,"term":"GO:1990605"}]},"cv_name":"molecular_function","definition":"Binding to an RNA molecule containing GU repeats.","definition_xrefs":["PMID:20081200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA binding","termid":"GO:0003723"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05214":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003723","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"GU repeat RNA binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1990605","terms_by_termid":{"GO:1990605":null}}


id: PBO:0083821
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Essential subunit of the Dam1 complex (aka DASH complex); complex couples kinetochores to the force produced by MT depolymerization thereby aiding in chromosome segregation; also localized to nuclear side of spindle pole body","termid":"PBO:0083821"}


id: PBO:0001564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SUMO-targeted ubiquitin-protein ligase subunit Rfp1","termid":"PBO:0001564"}


id: PBO:0005152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GTPase regulator Vps3 (predicted)","termid":"PBO:0005152"}


id: MONDO:0019344
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Antisynthetase (AS) syndrome is a clinically heterogeneous form of idiopathic inflammatory myopathy characterized by myositis, arthralgia, Raynaud phenomenon, mechanic hands, interstitial lung disease (ILD), and serum autoantibodies to aminoacyl transfer RNA synthetases (anti-ARS).","definition_xrefs":["Orphanet:81"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acquired idiopathic inflammatory myopathy","termid":"MONDO:0020122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"antisynthetase syndrome","secondary_identifiers":["MEDGEN:388567","MedDRA:10068801","icd11.foundation:1572057936","NORD:1926","DOID:0080744","SCTID:445187004","ICD9:279.49","GARD:735","MESH:C537778","UMLS:C2609059","EFO:1001982"],"synonyms":[{"name":"AS syndrome","type":"exact"},{"name":"anti-Jo1 syndrome","type":"exact"}],"termid":"MONDO:0019344","xrefs":{"Monarch":{"xref_id":"0019344"}}}


id: PBO:0046055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F pseudogene 3","termid":"PBO:0046055"}


id: PBO:0044817
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 108F (pseudogene)","termid":"PBO:0044817"}


id: PBO:0059229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein L1","termid":"PBO:0059229"}


id: GO:0047004
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + 2 NAD+ + UDP-N-acetyl-alpha-D-glucosamine = 3 H+ + 2 NADH + UDP-N-acetyl-2-amino-2-deoxy-D-glucuronate.","definition_xrefs":["EC:1.1.1.136","RHEA:13325"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"UDP-N-acetylglucosamine 6-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00421","MetaCyc:1.1.1.136-RXN"],"synonyms":[{"name":"UDP-2-acetamido-2-deoxy-D-glucose:NAD oxidoreductase activity","type":"related"},{"name":"UDP-GLcNAc dehydrogenase activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:NAD+ 6-oxidoreductase activity","type":"related"},{"name":"UDPacetylglucosamine dehydrogenase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine dehydrogenase activity","type":"related"}],"termid":"GO:0047004"}


id: MONDO:0045002
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disease or disorder that involves the vertebra.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vertebral column disorder","termid":"MONDO:0000812"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vertebral disorder","secondary_identifiers":["MEDGEN:747221","SCTID:430886005","UMLS:C2316319"],"synonyms":[{"name":"disease of vertebra","type":"exact"},{"name":"disease or disorder of vertebra","type":"exact"},{"name":"disorder of vertebra","type":"exact"},{"name":"vertebra disease","type":"exact"},{"name":"vertebra disease or disorder","type":"exact"}],"termid":"MONDO:0045002","xrefs":{"Monarch":{"xref_id":"0045002"}}}


id: PBO:0062089
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily A member 21 pseudogene","termid":"PBO:0062089"}


id: PBO:0113280
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pleiotropic negative transcriptional regulator; involved in Ras-cAMP and lysine biosynthetic pathways and nitrogen regulation; involved in retrograde (RTG) mitochondria-to-nucleus signaling","termid":"PBO:0113280"}


id: GO:0033240
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amines.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of amine metabolic process","termid":"GO:0033238"},{"relation_name":"positively_regulates","term_name":"amine metabolic process","termid":"GO:0009308"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of amine metabolic process","synonyms":[{"name":"positive regulation of amine metabolism","type":"exact"},{"name":"positive regulation of cellular amine metabolic process","type":"exact"}],"termid":"GO:0033240"}


id: PBO:0065625
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 3","termid":"PBO:0065625"}


id: PBO:0049009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphate isomerase","termid":"PBO:0049009"}


id: MONDO:0043131
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XX disorder of sex development","termid":"MONDO:0017576"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Michels Caskey syndrome","secondary_identifiers":["UMLS:C2931537","MESH:C537576","GARD:3590","MEDGEN:419102"],"synonyms":[{"name":"Mullerian aplasia with hypoplastic thumbs","type":"related"},{"name":"Mullerian aplasia with unilateral hypoplasia of the thumbs and skeletal spine deformities","type":"related"}],"termid":"MONDO:0043131","xrefs":{"Monarch":{"xref_id":"0043131"}}}


id: GO:0046345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of abscisic acid, 5-(1-hydroxy-2,6,6,trimethyl-4-oxocyclohex-2-en-1-y1)-3-methylpenta-2,4-dienoic acid.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abscisic acid metabolic process","termid":"GO:0009687"},{"relation_name":"is_a","term_name":"sesquiterpenoid catabolic process","termid":"GO:0016107"},{"relation_name":"is_a","term_name":"apocarotenoid catabolic process","termid":"GO:0043290"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"monocarboxylic acid catabolic process","termid":"GO:0072329"},{"relation_name":"is_a","term_name":"olefinic compound catabolic process","termid":"GO:0120256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"abscisic acid catabolic process","synonyms":[{"name":"abscisic acid breakdown","type":"exact"},{"name":"abscisic acid catabolism","type":"exact"},{"name":"abscisic acid degradation","type":"exact"}],"termid":"GO:0046345"}


id: PBO:0081154
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP92 zinc finger protein","termid":"PBO:0081154"}


id: PBO:0058528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6073","termid":"PBO:0058528"}


id: GO:0097593
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A part of the ventral disc of Giardia species (trophozoite stage) consisting of a spiral array of microtubules linked to the ventral membrane. These microtubules form the base of the ventral disc dorsal microribbons that extend nearly perpendicular from the membrane.","definition_xrefs":["GOC:giardia"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"ventral disc","termid":"GO:0097597"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ventral disc microtubule array","synonyms":[{"name":"spiral microtubule array","type":"broad"},{"name":"ventral disc spiral microtubule array","type":"exact"},{"name":"ventral disk microtubule array","type":"related"}],"termid":"GO:0097593"}


id: GO:0050073
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + oleandomycin = ADP + 2 H+ + oleandomycin 2'-O-phosphate.","definition_xrefs":["RHEA:18333","EC:2.7.1.136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kinase activity","termid":"GO:0016301"},{"relation_name":"is_a","term_name":"phosphotransferase activity, alcohol group as acceptor","termid":"GO:0016773"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016740","GO:0016301"],"is_obsolete":false,"name":"macrolide 2'-kinase activity","secondary_identifiers":["MetaCyc:MACROLIDE-2-KINASE-RXN","KEGG_REACTION:R03780"],"synonyms":[{"name":"ATP:macrolide 2'-O-phosphotransferase activity","type":"related"}],"termid":"GO:0050073"}


id: MONDO:1010605
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital hypothyroidism that occurs in goat.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital hypothyroidism, non-human animal","termid":"MONDO:1010057"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital hypothyroidism, goat","secondary_identifiers":["OMIA:000536-9925"],"termid":"MONDO:1010605","xrefs":{"Monarch":{"xref_id":"1010605"}}}


id: PBO:0030542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_cAMP_level_during_glucose_starvation","termid":"PBO:0030542"}


id: GO:0042568
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex of two proteins, which in animals is 50kDa and consists of the insulin-like growth factor (IGF) and one of the insulin-like growth factor binding protein-1 (IGFBP-1), -2 (IGFBP-2), -4 (IGFBP-4) and -6 (IGFBP-6). The complex plays a role in growth and development.","definition_xrefs":["GOC:jl","PMID:12239079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"insulin-like growth factor binding protein complex","termid":"GO:0016942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005576"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005576"],"is_obsolete":false,"name":"insulin-like growth factor binary complex","synonyms":[{"name":"IGF binary complex","type":"exact"}],"termid":"GO:0042568"}


id: GO:0048914
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of compact myelin sheaths around the axons of the anterior lateral line nerve.","definition_xrefs":["PMID:12112375"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myelination of lateral line nerve axons","termid":"GO:0048897"},{"relation_name":"part_of","term_name":"anterior lateral line nerve glial cell morphogenesis involved in differentiation","termid":"GO:0048940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myelination of anterior lateral line nerve axons","termid":"GO:0048914"}


id: MONDO:1011480
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Becker type muscular dystrophy that occurs in pig.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Becker type muscular dystrophy, non-human animal","termid":"MONDO:1011435"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Becker type muscular dystrophy, pig","secondary_identifiers":["OMIA:001888-9823"],"termid":"MONDO:1011480","xrefs":{"Monarch":{"xref_id":"1011480"}}}


id: GO:0050910
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events involved in the perception of sound vibration in which the vibration is received and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system process","termid":"GO:0050877"},{"relation_name":"is_a","term_name":"detection of mechanical stimulus involved in sensory perception","termid":"GO:0050974"},{"relation_name":"part_of","term_name":"sensory perception of sound","termid":"GO:0007605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of mechanical stimulus involved in sensory perception of sound","secondary_identifiers":["GO:0009592","GO:0055128"],"synonyms":[{"name":"detection of sound","type":"exact"},{"name":"hearing, sensory transduction of sound","type":"exact"},{"name":"perception of sound, detection of mechanical stimulus","type":"exact"},{"name":"perception of sound, sensory detection of mechanical stimulus","type":"exact"},{"name":"perception of sound, sensory transduction of mechanical stimulus","type":"exact"},{"name":"sensory detection of mechanical stimulus during perception of sound","type":"exact"},{"name":"sensory transduction of mechanical stimulus during perception of sound","type":"exact"},{"name":"sensory transduction of sound","type":"exact"}],"termid":"GO:0050910"}


id: FYECO:0000318
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which compactin was added to the medium or assay buffer.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ compactin","termid":"FYECO:0000318"}


id: PBO:0039504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 26 pseudogene 2","termid":"PBO:0039504"}


id: PBO:0044193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cathepsin B","termid":"PBO:0044193"}


id: PBO:0085025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Nitric oxide oxidoreductase; flavohemoglobin that plays role in oxidative and nitrosative stress responses; protects against nitration of cellular targets and against cell growth inhibition under aerobic or anaerobic conditions; yeast flavohemoglobin Yhb1p and human homolog neuroglobin NGB protect cells against alpha-synuclein cytotoxicity and aggregate formation; protein increases in abundance, relocalizes from nucleus to cytoplasmic foci upon DNA replication stress","termid":"PBO:0085025"}


id: PBO:0109301
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"codon-optimization increases the mRNA concentration","termid":"PBO:0109301"}


id: PBO:0001025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mRNA export shuttling protein","termid":"PBO:0001025"}


id: PBO:0069880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1168, pseudogene","termid":"PBO:0069880"}


id: GO:0019351
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of dethiobiotin, a derivative of biotin in which the sulfur atom has been replaced by two hydrogen atoms.","definition_xrefs":["GOC:ai","ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amide biosynthetic process","termid":"GO:0043604"},{"relation_name":"is_a","term_name":"dethiobiotin metabolic process","termid":"GO:0046450"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dethiobiotin biosynthetic process","synonyms":[{"name":"desthiobiotin biosynthesis","type":"exact"},{"name":"desthiobiotin biosynthetic process","type":"exact"},{"name":"dethiobiotin anabolism","type":"exact"},{"name":"dethiobiotin biosynthesis","type":"exact"},{"name":"dethiobiotin formation","type":"exact"},{"name":"dethiobiotin synthesis","type":"exact"}],"termid":"GO:0019351"}


id: PBO:0055574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 3010","termid":"PBO:0055574"}


id: MONDO:1011350
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Premature aging syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"premature aging syndrome, non-human animal","termid":"MONDO:1011350","xrefs":{"Monarch":{"xref_id":"1011350"}}}


id: GO:1905050
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of metallopeptidase activity.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","PMID:26473732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of peptidase activity","termid":"GO:0010952"},{"relation_name":"is_a","term_name":"regulation of metallopeptidase activity","termid":"GO:1905048"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of metallopeptidase activity","synonyms":[{"name":"activation of metallopeptidase activity","type":"narrow"},{"name":"activation of metalloprotease activity","type":"narrow"},{"name":"activation of metalloproteinase activity","type":"narrow"},{"name":"positive regulation of metalloprotease activity","type":"narrow"},{"name":"positive regulation of metalloproteinase activity","type":"narrow"},{"name":"up regulation of metallopeptidase activity","type":"exact"},{"name":"up regulation of metalloprotease activity","type":"narrow"},{"name":"up regulation of metalloproteinase activity","type":"narrow"},{"name":"up-regulation of metallopeptidase activity","type":"exact"},{"name":"up-regulation of metalloprotease activity","type":"narrow"},{"name":"up-regulation of metalloproteinase activity","type":"narrow"},{"name":"upregulation of metallopeptidase activity","type":"exact"},{"name":"upregulation of metalloprotease activity","type":"narrow"},{"name":"upregulation of metalloproteinase activity","type":"narrow"}],"termid":"GO:1905050"}


id: GO:0042999
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transport of Cystic Fibrosis Transmembrane conductance Regulator (CFTR) protein from the Golgi to the plasma membrane.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of Golgi to plasma membrane CFTR protein transport (obsolete GO:0042999)","termid":"GO:0042999"}


id: PBO:0063599
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 12","termid":"PBO:0063599"}


id: MONDO:0957556
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital pulmonary veins atresia or stenosis","termid":"MONDO:0017864"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary vein atresia","secondary_identifiers":["MEDGEN:576417","Orphanet:99126","UMLS:C0344679"],"termid":"MONDO:0957556","xrefs":{"Monarch":{"xref_id":"0957556"}}}


id: GO:0050862
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of signaling pathways initiated by the cross-linking of an antigen receptor on a T cell.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of T cell receptor signaling pathway","termid":"GO:0050856"},{"relation_name":"is_a","term_name":"positive regulation of antigen receptor-mediated signaling pathway","termid":"GO:0050857"},{"relation_name":"positively_regulates","term_name":"T cell receptor signaling pathway","termid":"GO:0050852"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"positive regulation of T cell receptor signaling pathway","synonyms":[{"name":"activation of T cell receptor signaling pathway","type":"narrow"},{"name":"positive regulation of T cell receptor signalling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of T-cell receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signaling pathway","type":"exact"},{"name":"positive regulation of T-lymphocyte receptor signalling pathway","type":"exact"},{"name":"positive regulation of TCR signaling pathway","type":"exact"},{"name":"stimulation of T cell receptor signaling pathway","type":"narrow"},{"name":"up regulation of T cell receptor signaling pathway","type":"exact"},{"name":"up-regulation of T cell receptor signaling pathway","type":"exact"},{"name":"upregulation of T cell receptor signaling pathway","type":"exact"}],"termid":"GO:0050862"}


id: PBO:0004928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi transport complex subunit Cog3 (predicted)","termid":"PBO:0004928"}


id: FYPO:0002953
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of S-adenosyl-L-methionine measured in a cell is higher than normal when the cell is in G0 phase.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in cell during G0","termid":"FYPO:0002949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"increased S-adenosyl-L-methionine level during G0","synonyms":[{"name":"increased S-adenosyl-L-methionine accumulation during G0","type":"related"},{"name":"increased S-adenosyl-L-methionine level during cell quiescence","type":"exact"},{"name":"increased S-adenosyl-L-methionine level during quiescence","type":"exact"},{"name":"increased S-adenosylmethionine level during G0","type":"exact"},{"name":"increased SAM level during G0","type":"exact"}],"termid":"FYPO:0002953"}


id: FYPO:0005800
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the movement of one or more proteins within the plasma membrane is abnormal.","definition_xrefs":["PomBase:mah","PMID:25837586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal cellular process during vegetative growth","termid":"FYPO:0001362"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"abnormal protein movement within plasma membrane during vegetative growth","synonyms":[{"name":"abnormal protein movement within plasma membrane during mitotic cell cycle","type":"related"}],"termid":"FYPO:0005800"}


id: PBO:0052783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 20","termid":"PBO:0052783"}


id: GO:0140781
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of ilicicolin H, a 4-hydroxy-2-pyridone alkaloid that has potent and broad antifungal activities by inhibiting the mitochondrial respiration chain.","definition_xrefs":["PMID:30905148","PMID:31216742","PMID:34947016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid biosynthetic process","termid":"GO:0009821"},{"relation_name":"is_a","term_name":"polyketide biosynthetic process","termid":"GO:0030639"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"pyridine-containing compound biosynthetic process","termid":"GO:0072525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"ilicicolin H biosynthetic process","synonyms":[{"name":"ilicicolin H anabolism","type":"exact"},{"name":"ilicicolin H biosynthesis","type":"exact"},{"name":"ilicicolin H formation","type":"exact"},{"name":"ilicicolin H synthesis","type":"exact"}],"termid":"GO:0140781"}


id: MONDO:0012435
data:
  {"annotated_genes":["SJAG_01597"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87327],"is_not":false,"summary":null,"term":"MONDO:0012435"}]},"cv_name":"mondo","definition":"A syndrome characterized by severe early onset (before the age of three years) dilated cardiomyopathy (DCM) with conduction defects (long QT syndrome), non-progressive cerebellar ataxia, testicular dysgenesis, and 3-methylglutaconic aciduria.","definition_xrefs":["Orphanet:66634"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete syndrome associated with dilated cardiomyopathy (obsolete MONDO:0016337)","termid":"MONDO:0016337"},{"relation_name":"is_a","term_name":"3-methylglutaconic aciduria","termid":"MONDO:0017359"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01597":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"3-methylglutaconic aciduria type 5","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:610198","MESH:C565706","NCIT:C173146","GARD:12964","icd11.foundation:422277813","MEDGEN:347542","DOID:0110000","SCTID:711412004","UMLS:C1857776"],"synonyms":[{"name":"3 alpha methylglutaconic aciduria type V","type":"related"},{"name":"3 methylglutaconic aciduria type V","type":"related"},{"name":"3-METHYLGLUTACONIC aciduria, type V","type":"related"},{"name":"3-Methylglutaconic aciduria, type 5","type":"related"},{"name":"3-methylglutaconic aciduria caused by mutation in DNAJC19","type":"exact"},{"name":"3-methylglutaconic aciduria type 5","type":"exact"},{"name":"3-methylglutaconic aciduria type V","type":"exact"},{"name":"DCMA","type":"exact"},{"name":"DCMA syndrome","type":"exact"},{"name":"DNAJC19 3-methylglutaconic aciduria","type":"exact"},{"name":"MGA 5","type":"related"},{"name":"MGA V","type":"related"},{"name":"MGA5","type":"exact"},{"name":"MGCA5","type":"exact"},{"name":"Mga, type 5","type":"related"},{"name":"cardiomyopathy, dilated, with ataxia","type":"related"},{"name":"dilated cardiomyopathy with ataxia","type":"exact"}],"termid":"MONDO:0012435","terms_by_termid":{"MONDO:0012435":null},"xrefs":{"Monarch":{"xref_id":"0012435"}}}


id: GO:0030645
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The anaerobic chemical reactions and pathways resulting in the breakdown of glucose, with the production of acetic acid, butyric acid, carbon dioxide (CO2), and dihydrogen; effected by some saccharolytic species of Clostridium, e.g. C. butyricum.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucose catabolic process","termid":"GO:0006007"},{"relation_name":"is_a","term_name":"fermentation","termid":"GO:0006113"},{"relation_name":"is_a","term_name":"butyrate metabolic process","termid":"GO:0019605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0006091"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0005975","GO:0006091","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"glucose catabolic process to butyrate","synonyms":[{"name":"butyrate fermentation","type":"exact"},{"name":"glucose fermentation to butyrate","type":"exact"}],"termid":"GO:0030645"}


id: PR:Q9UTH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An electron transfer flavoprotein subunit beta that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01161","PANTHER:PTHR21294:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"electron transfer flavoprotein subunit beta (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1805.02c","secondary_identifiers":["UniProtKB:Q9UTH2"],"synonyms":[{"name":"Spom972h-ETFB","type":"exact"},{"name":"beta-ETF (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UTH2"}


id: PBO:0074020
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 14","termid":"PBO:0074020"}


id: MONDO:0001754
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A potentially life-threatening pregnancy-related disorder characterized by tonic-clonic seizures in association with hypertension after the twentieth week of gestation and up to six weeks postpartum and in the absence of other potential causes of seizures.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"preeclampsia","termid":"MONDO:0005081"},{"relation_name":"is_a","term_name":"toxemia of pregnancy","termid":"MONDO:0045048"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eclampsia","secondary_identifiers":["icd11.foundation:1759760659","UMLS:C0013537","ICD10WHO:O15","ICD10CM:O15","MEDGEN:4443","DOID:13593","MESH:D004461","ICD9:642.64","SCTID:303063000","NCIT:C87167"],"synonyms":[{"name":"eclampsia in puerperium","type":"exact"},{"name":"eclampsia, postpartum","type":"exact"},{"name":"postpartum eclampsia","type":"exact"}],"termid":"MONDO:0001754","xrefs":{"Monarch":{"xref_id":"0001754"}}}


id: PBO:0000842
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.4.2","termid":"PBO:0000842"}


id: PBO:0081723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZNF652 antisense RNA 1","termid":"PBO:0081723"}


id: PBO:0109172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PKMYT1 associated lncRNA","termid":"PBO:0109172"}


id: PR:Q09762
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24H6.08 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09762"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24H6.08 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24H6.08","synonyms":[{"name":"Spom972h-SPAC24H6.08","type":"exact"}],"termid":"PR:Q09762"}


id: MONDO:0001085
data:
  {"annotated_genes":["SJAG_03994"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013898"}]},"cv_name":"mondo","definition":"Inflammation of the renal tubules and supporting tissues of the kidney.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephritis","termid":"MONDO:0001166"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"interstitial nephritis","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200136","ICD10CM:N10-N16","DOID:1063","MESH:D009395","UMLS:C0041349","MEDGEN:11952","NCIT:C26834","ICD9:583.89","SCTID:28689008"],"synonyms":[{"name":"Tubulointerstitial nephritis","type":"exact"},{"name":"renal tubulo-interstitial disease","type":"exact"}],"termid":"MONDO:0001085","terms_by_termid":{"MONDO:0013898":null},"xrefs":{"Monarch":{"xref_id":"0001085"}}}


id: PR:Q9USU5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- gas2 gene.","definition_xrefs":["UniProtKB:Q9USU5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1,3-beta-glucanosyltransferase gas2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A10.08","synonyms":[{"name":"Spom972h-gas2","type":"exact"}],"termid":"PR:Q9USU5"}


id: GO:0004917
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Combining with interleukin-7 and transmitting the signal from one side of the membrane to the other to initiate a change in cell activity.","definition_xrefs":["GOC:jl","GOC:signaling"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytokine receptor activity","termid":"GO:0004896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0038023","GO:0003674"],"is_obsolete":false,"name":"interleukin-7 receptor activity","synonyms":[{"name":"IL-7 receptor activity","type":"exact"},{"name":"IL-7R","type":"exact"}],"termid":"GO:0004917"}


id: PBO:0065316
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine protease 40A (pseudogene)","termid":"PBO:0065316"}


id: PBO:0041490
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 12 open reading frame 40","termid":"PBO:0041490"}


id: PBO:0064382
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PMS1 homolog 2, mismatch repair system component pseudogene 4","termid":"PBO:0064382"}


id: PR:O13610
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An rRNA-processing protein FCF1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR12416:SF0","PRO:DNx","OMA:SCHPO02873"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA-processing protein fcf1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC32H8.04c","secondary_identifiers":["UniProtKB:O13610"],"synonyms":[{"name":"Spom972h-FCF1","type":"exact"}],"termid":"PR:O13610"}


id: PBO:0056266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mastermind like transcriptional coactivator 2","termid":"PBO:0056266"}


id: GO:1902566
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of eosinophil activation.","definition_xrefs":["GOC:TermGenie","PMID:16254138"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte activation","termid":"GO:0002694"},{"relation_name":"regulates","term_name":"eosinophil activation","termid":"GO:0043307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of eosinophil activation","termid":"GO:1902566"}


id: GO:0090717
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An immune response mediated by reactivated memory T cells and B cells and directed against a previously encountered antigen, being quicker and quantitatively better compared with the primary response.","definition_xrefs":["PMID:26831526","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"adaptive immune memory response","termid":"GO:0090716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune memory response involving T cells and B cells","termid":"GO:0090717"}


id: GO:0033417
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"A triplet codon-amino acid adaptor activity that recognizes a CUU codon.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"triplet codon-amino acid adaptor activity","termid":"GO:0030533"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003723"},{"rel_name":"is_a","termid":"GO:0060090"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0060090","GO:0003674","GO:0005488","GO:0003723"],"is_obsolete":false,"name":"CUU codon-amino acid adaptor activity","synonyms":[{"name":"CTT codon-amino acid adaptor activity","type":"exact"},{"name":"leucine tRNA","type":"related"}],"termid":"GO:0033417"}


id: PBO:0004827
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"forced sequence to be coding","termid":"PBO:0004827"}


id: GO:0097339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which glycolate is transported across a membrane. Glycolate is the anion of hydroxyethanoic acid (glycolic acid).","definition_xrefs":["PMID:11283302","GOC:am","PMID:11785976"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolate transport","termid":"GO:1900866"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810","GO:0055085"],"is_obsolete":false,"name":"glycolate transmembrane transport","synonyms":[{"name":"glycolate membrane transport","type":"exact"}],"termid":"GO:0097339"}


id: PBO:0016547
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1-5,6,7,8-tetrahydrofolate (THF) synthase, trifunctional enzyme Thf1","termid":"PBO:0016547"}


id: GO:0043167
data:
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id: MONDO:0017032
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id: MONDO:0017416
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Postpoliomyelitis syndrome (PPS) is a neurologic disorder characterized by the development of new neuromuscular symptoms such as progressive muscular weakness or abnormal muscle fatigability occurring in survivors of the acute paralytic form of poliomyelitis, 15-40 years after recovery from the disease, and that is unexplained by other medical causes. Other manifestations that can occur gradually include generalized fatigue, muscle atrophy, muscle and joint pain, intolerance to cold, and difficulties sleeping, swallowing or breathing.","definition_xrefs":["Orphanet:2942"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poliomyelitis","termid":"MONDO:0017373"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"postpoliomyelitis syndrome","secondary_identifiers":["EFO:0007454","MEDGEN:36363","NORD:1600","DOID:4952","MESH:D016262","ICD10CM:G14","GARD:4454","icd11.foundation:2018885243","UMLS:C0080040","SCTID:31097004"],"synonyms":[{"name":"Post Polio Syndrome","type":"exact"},{"name":"polio late effects","type":"related"},{"name":"post polio syndrome","type":"related"},{"name":"post-polio muscular atrophy","type":"related"},{"name":"post-polio sequelae","type":"related"},{"name":"post-poliomyelitic syndrome","type":"related"},{"name":"postpolio sequelae","type":"exact"},{"name":"postpolio syndrome","type":"exact"},{"name":"postpoliomyelitic syndrome","type":"exact"},{"name":"postpoliomyelitis sequelae","type":"exact"},{"name":"postpoliomyelitis syndrome","type":"exact"}],"termid":"MONDO:0017416","xrefs":{"Monarch":{"xref_id":"0017416"}}}


id: PBO:0085929
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; mitochondrial-dependent role in the extension of chronological lifespan; overexpression increases oxygen consumption and respiratory activity while deletion results in reduced oxygen consumption under conditions of caloric restriction; induced by iron homeostasis transcription factor Aft2p; multicopy suppressor of temperature sensitive hsf1 mutant; induced by treatment with 8-methoxypsoralen and UVA irradiation","termid":"PBO:0085929"}


id: GO:0006934
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id: PBO:0068668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 49, pseudogene","termid":"PBO:0068668"}


id: GO:0032502
data:
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id: GO:1902651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H2A-H2B dimer displacement.","definition_xrefs":["PMID:22199252","GO_REF:0000058","GOC:di","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H2A-H2B dimer displacement (obsolete GO:1902651)","synonyms":[{"name":"activation of histone H2A-H2B dimer displacement","type":"narrow"},{"name":"up regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"up-regulation of histone H2A-H2B dimer displacement","type":"exact"},{"name":"upregulation of histone H2A-H2B dimer displacement","type":"exact"}],"termid":"GO:1902651"}


id: PBO:0043443
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calponin 2 pseudogene 3","termid":"PBO:0043443"}


id: PATO:0002209
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having the shape of an incisor tooth.","definition_xrefs":["thefreedictionary:http://www.thefreedictionary.com/incisiform"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incisiform","termid":"PATO:0002209"}


id: MONDO:0020339
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete X-linked complex spastic paraplegia (obsolete MONDO:0020339)","secondary_identifiers":["Orphanet:98888"],"synonyms":[{"name":"Complex X-linked HSP","type":"exact"},{"name":"Complex X-linked SPG","type":"exact"},{"name":"X-linked complicated spastic paraplegia","type":"exact"},{"name":"complicated X-linked HSP","type":"exact"},{"name":"complicated X-linked SPG","type":"exact"}],"termid":"MONDO:0020339","xrefs":{"Monarch":{"xref_id":"0020339"}}}


id: GO:0033143
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the activity of any intracellular steroid hormone receptor signaling pathway.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular signal transduction","termid":"GO:1902531"},{"relation_name":"regulates","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"regulation of intracellular steroid hormone receptor signaling pathway","synonyms":[{"name":"regulation of steroid hormone receptor signaling pathway","type":"broad"},{"name":"regulation of steroid hormone receptor signalling pathway","type":"broad"}],"termid":"GO:0033143"}


id: SO:0001422
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of a polypeptide, involved in the transition from one conformational state to another.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biochemical_region_of_peptide","termid":"SO:0100001"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"conformational_switch","synonyms":[{"name":"polypeptide conformational switch","type":"exact"}],"termid":"SO:0001422"}


id: PBO:0016914
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"t-UTP complex subint Utp8 (predicted)","termid":"PBO:0016914"}


id: PBO:0047976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FSHD region gene 1 family member C, pseudogene","termid":"PBO:0047976"}


id: PATO:0000761
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A behavioral quality of a process inhering in a bearer by virtue of the bearer's exhibiting reduced activity.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"behavioural active","termid":"PATO:0001707"},{"relation_name":"is_a","term_name":"decreased object quality","termid":"PATO:0002303"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased behavioural activity","synonyms":[{"name":"hypoactive","type":"exact"}],"termid":"PATO:0000761"}


id: GO:0033091
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  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of immature T cell proliferation.","definition_xrefs":["GOC:add","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of immature T cell proliferation","termid":"GO:0033083"},{"relation_name":"is_a","term_name":"positive regulation of T cell proliferation","termid":"GO:0042102"},{"relation_name":"positively_regulates","term_name":"immature T cell proliferation","termid":"GO:0033079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007155"},{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"positive regulation of immature T cell proliferation","termid":"GO:0033091"}


id: PBO:0088042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ubiquitin-conjugating enzyme (E2); involved in postreplication repair as a heterodimer with Rad18p, regulation of K63 polyubiquitination in response to oxidative stress, DSBR and checkpoint control as a heterodimer with Bre1p, ubiquitin-mediated N-end rule protein degradation as a heterodimer with Ubr1p, ERAD with Ubr1p in the absence of canonical ER membrane ligases, and Rpn4p turnover as part of proteasome homeostasis, in complex with Ubr2p and Mub1p","termid":"PBO:0088042"}


id: PBO:0060718
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit A7","termid":"PBO:0060718"}


id: PBO:0078218
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor beta variable 8-2 (pseudogene)","termid":"PBO:0078218"}


id: MONDO:0015857
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare non-malformative gynecologic or obstetric disease (obsolete MONDO:0015857)","secondary_identifiers":["Orphanet:180199"],"termid":"MONDO:0015857","xrefs":{"Monarch":{"xref_id":"0015857"}}}


id: PBO:0002098
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transcription factor TFIIB","termid":"PBO:0002098"}


id: PBO:0001961
data:
  {"annotation_feature_type":"gene","cv_name":"gene_ex","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"target genes transcriptionally co-regulated by Mcs6","termid":"PBO:0001961"}


id: SO:0000418
data:
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id: PBO:0048260
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"galactokinase 2","termid":"PBO:0048260"}


id: MONDO:0975837
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurodegeneration, infantile-onset, with optic atrophy and brain abnormalities","secondary_identifiers":["OMIM:620987"],"termid":"MONDO:0975837","xrefs":{"Monarch":{"xref_id":"0975837"}}}


id: MONDO:0018502
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hereditary gastric cancer refers to the occurrence of gastric cancer in a familial context and is described as two or more cases of gastric cancer in first or second degree relatives with at least one case diagnosed before the age of 50. Familial clustering is observed in 10% of all cases of gastric cancer, and includes hereditary diffuse gastric cancer (early onset diffuse-type gastric cancer), gastric adenocarcinoma and proximal polyposis of the stomach and familial intestinal gastric cancer (familial clustering of intestinal type gastric adenocarcinoma). Hereditary gastric cancer can also occur in other hereditary cancer syndromes such as Lynch syndrome, Li-Fraumeni syndrome, familial adenomatous polyposis and juvenile polyposis syndrome.","definition_xrefs":["Orphanet:423776"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"gastric carcinoma","termid":"MONDO:0004950"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"hereditary gastric cancer","secondary_identifiers":["GARD:21758","MEDGEN:1843054","UMLS:C5680075"],"synonyms":[{"name":"hereditary cancer of stomach","type":"exact"},{"name":"hereditary gastric cancer","type":"exact"}],"termid":"MONDO:0018502","xrefs":{"Monarch":{"xref_id":"0018502"}}}


id: MONDO:0005259
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder most often diagnosed in the pediatric years in which the individual displays marked impairment in social interaction and a repetitive, stereotyped pattern of behavior. The individual, however, displays no delay in language or cognitive development, which differentiates Asperger Syndrome from autism.","definition_xrefs":["NCIT:C97159"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autism spectrum disorder","termid":"MONDO:0005258"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Asperger syndrome","secondary_identifiers":["EFO:0003757","SCTID:23560001","MEDGEN:68633","Orphanet:1162","UMLS:C0236792","MESH:D020817","DOID:0050432","icd11.foundation:366940030"],"synonyms":[{"name":"ASPG","type":"broad"},{"name":"asperger syndrome, susceptibility to","type":"related"},{"name":"autism spectrum disorder without disorder of intellectual development and with mild or no impairment of functional language","type":"exact"}],"termid":"MONDO:0005259","xrefs":{"Monarch":{"xref_id":"0005259"}}}


id: PBO:0048607
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GIHCG inhibitor of miR-200b/200a/429 expression","termid":"PBO:0048607"}


id: PBO:0001114
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"4.2.1.36","termid":"PBO:0001114"}


id: PR:P0CT37
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- Tf2-4 gene.","definition_xrefs":["UniProtKB:P0CT37","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transposon Tf2-4 polyprotein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC26A3.13c","synonyms":[{"name":"Spom972h-Tf2-4","type":"exact"},{"name":"retrotransposable element Tf2 155 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P0CT37"}


id: GO:0014882
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the number of myofibrils. A myofibril is the contractile element of skeletal and cardiac muscle. It is a long, highly organized bundle of actin, myosin, and other proteins that contracts by a sliding filament mechanism.","definition_xrefs":["GOC:tb","GOC:ef","GOC:dph","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of muscle hyperplasia","termid":"GO:0014738"},{"relation_name":"is_a","term_name":"regulation of biological quality","termid":"GO:0065008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of myofibril number","synonyms":[{"name":"change of myofibril number","type":"exact"}],"termid":"GO:0014882"}


id: PBO:0085877
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; identified by gene-trapping, microarray-based expression analysis, and genome-wide homology searching; SWAT-GFP fusion protein localizes to the endoplasmic reticulum and vacuole, while mCherry fusion localizes to just the vacuole","termid":"PBO:0085877"}


id: PBO:0053741
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 967","termid":"PBO:0053741"}


id: PBO:0076462
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transaldolase 1 pseudogene 1","termid":"PBO:0076462"}


id: GO:0072072
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the kidney stroma over time, from its formation to the mature structure. The kidney stroma is the mesenchyme of the mature kidney.","definition_xrefs":["GOC:mtg_kidney_jan10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"connective tissue development","termid":"GO:0061448"},{"relation_name":"is_a","term_name":"kidney mesenchyme development","termid":"GO:0072074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"kidney stroma development","termid":"GO:0072072"}


id: GO:0003349
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which an epicardial cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["PMID:18722343","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"epicardium-derived cardiac endothelial cell differentiation","termid":"GO:0003349"}


id: GO:0102845
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 1-18:3-2-16:0-monogalactosyldiacylglycerol + O2 + a reduced electron acceptor = 1-18:3-2-16:1-monogalactosyldiacylglycerol + 2 H2O + an oxidized electron acceptor.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete 1-18:3-2-16:0-monogalactosyldiacylglycerol desaturase activity (obsolete GO:0102845)","termid":"GO:0102845"}


id: PBO:0064912
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PPP4R2 pseudogene 1","termid":"PBO:0064912"}


id: PR:Q9Y805
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A pre-mRNA-splicing factor CWC25 homolog that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02673","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA-splicing factor cwf25 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC146.05c","secondary_identifiers":["UniProtKB:Q9Y805"],"synonyms":[{"name":"Spom972h-CWC25","type":"exact"},{"name":"complexed with cdc5 protein 25 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y805"}


id: PBO:0029287
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_Mmi1_focus","termid":"PBO:0029287"}


id: MONDO:0007948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Marfan syndrome","termid":"MONDO:0007947"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"marfanoid hypermobility syndrome","secondary_identifiers":["MESH:C531742","OMIM:154750","MEDGEN:120632","UMLS:C0268365"],"synonyms":[{"name":"marfanoid hypermobility syndrome","type":"exact"}],"termid":"MONDO:0007948","xrefs":{"Monarch":{"xref_id":"0007948"}}}


id: GO:0045200
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The specification and formation of the apicobasal polarity of a neuroblast cell, a progenitor of the central nervous system.","definition_xrefs":["GOC:bf","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"establishment of cell polarity","termid":"GO:0030010"},{"relation_name":"is_a","term_name":"establishment or maintenance of neuroblast polarity","termid":"GO:0045196"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007163"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007163","GO:0008150"],"is_obsolete":false,"name":"establishment of neuroblast polarity","secondary_identifiers":["GO:0043343","GO:0043340"],"synonyms":[{"name":"establishment of neuroblast cell polarity","type":"exact"}],"termid":"GO:0045200"}


id: PBO:0064198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta enriched 1","termid":"PBO:0064198"}


id: SO:1000132
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The effect of a change in nucleotide sequence.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000132 sequence_variant_effect (obsolete SO:1000132)","synonyms":[{"name":"sequence variant effect","type":"related"}],"termid":"SO:1000132"}


id: PBO:0082732
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Component of the Rpd3L histone deacetylase complex; involved in transcriptional regulation of PHO5; affects termination of snoRNAs and cryptic unstable transcripts (CUTs); C-terminus shares significant sequence identity with the human candidate tumor suppressor p33-ING1 and its isoform ING3","termid":"PBO:0082732"}


id: GO:0009256
data:
  {"annotated_genes":["SJAG_04156","SJAG_00106"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114469,110386],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009257"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 10-formyltetrahydrofolate, the formylated derivative of tetrahydrofolate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"},{"relation_name":"is_a","term_name":"tetrahydrofolate metabolic process","termid":"GO:0046653"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00106":null,"SJAG_04156":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"10-formyltetrahydrofolate metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"10-formyl-THF metabolic process","type":"exact"},{"name":"10-formyl-THF metabolism","type":"exact"},{"name":"10-formyltetrahydrofolate metabolism","type":"exact"}],"termid":"GO:0009256","terms_by_termid":{"GO:0009257":null}}


id: PBO:0062290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily M member 1","termid":"PBO:0062290"}


id: PBO:0081389
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 229","termid":"PBO:0081389"}


id: PBO:0033830
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Overexpression causing Deoxyglucose Resistance","termid":"PBO:0033830"}


id: MONDO:0003530
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete aggressive digital papillary adenocarcinoma (obsolete MONDO:0003530)","termid":"MONDO:0003530","xrefs":{"Monarch":{"xref_id":"0003530"}}}


id: GO:0070252
data:
  {"annotated_genes":["SJAG_00750"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[119706],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033275"}]},"cv_name":"biological_process","definition":"The actin filament-based process in which cytoplasmic actin filaments slide past one another resulting in contraction of all or part of the cell body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actin filament-based movement","termid":"GO:0030048"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00750":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"actin-mediated cell contraction","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0070252","terms_by_termid":{"GO:0033275":null}}


id: GO:2000529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of myeloid dendritic cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell chemotaxis","termid":"GO:2000510"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000527"},{"relation_name":"positively_regulates","term_name":"myeloid dendritic cell chemotaxis","termid":"GO:0002408"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid dendritic cell chemotaxis","termid":"GO:2000529"}


id: GO:0032654
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of interleukin-11 production.","definition_xrefs":["GOC:mah","PMID:29286137"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production","termid":"GO:0001817"},{"relation_name":"regulates","term_name":"interleukin-11 production","termid":"GO:0032614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"regulation of interleukin-11 production","secondary_identifiers":["GO:0150169","GO:0045363"],"synonyms":[{"name":"regulation of IL-11 production","type":"exact"},{"name":"regulation of interleukin-11 biosynthetic process","type":"narrow"},{"name":"regulation of interleukin-11 secretion","type":"narrow"}],"termid":"GO:0032654"}


id: PBO:0083937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Galactose-1-phosphate uridyl transferase; synthesizes glucose-1-phosphate and UDP-galactose from UDP-D-glucose and alpha-D-galactose-1-phosphate in the second step of galactose catabolism; human homolog UGP2 can complement yeast null mutant","termid":"PBO:0083937"}


id: PBO:0013779
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-mannosidase Ams1 (predicted)","termid":"PBO:0013779"}


id: PBO:0057853
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3164","termid":"PBO:0057853"}


id: GO:0090540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of cellulose, a linear beta1-4 glucan of molecular mass 50-400 kDa with the pyranose units in the -4C1 conformation, as it occurs in certain types of bacteria, mainly Acetobacter, Sarcina ventriculi and Agrobacteria.","definition_xrefs":["PMID:24097954","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellulose biosynthetic process","termid":"GO:0030244"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"bacterial cellulose biosynthetic process","synonyms":[{"name":"bacterial cellulose biosynthesis","type":"exact"}],"termid":"GO:0090540"}


id: GO:0061423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of transcription from an RNA polymerase II promoter resulting in the increased frequency, rate or extent of the directed movement of sodium ions (Na+) into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:11523797","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of sodium ion transport by positive regulation of transcription from RNA polymerase II promoter (obsolete GO:0061423)","termid":"GO:0061423"}


id: PBO:0057059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 143","termid":"PBO:0057059"}


id: GO:0140952
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl27-[histone H3] + 2 S-adenosyl-L-methionine = 2 H+ + N6,N6-dimethyl-L-lysyl27-[histone H3] + 2 S-adenosyl-L-homocysteine. This reaction is the successive addition of two methyl groups to the unmethylated lysine residue at position 27 of histone H3, producing histone H3K27me2.","definition_xrefs":["RHEA:64452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone H3K27 methyltransferase activity","termid":"GO:0046976"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0008276"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0008276","GO:0003674","GO:0016740","GO:0140096"],"is_obsolete":false,"name":"histone H3K27 dimethyltransferase activity","secondary_identifiers":["EC:2.1.1.371"],"synonyms":[{"name":"histone H3-K27 dimethylase activity","type":"exact"},{"name":"histone H3-K27 dimethylation","type":"broad"},{"name":"histone H3K27 dimethylase activity","type":"exact"},{"name":"histone H3K27 dimethylation","type":"broad"},{"name":"histone H3K27 mono/dimethylase activity","type":"exact"},{"name":"histone lysine N-dimethyltransferase activity (H3-K27 specific)","type":"exact"}],"termid":"GO:0140952"}


id: GO:0038015
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which internalization of an insulin receptor activates or increases the frequency, rate or extent of the insulin receptor signaling pathway. Endocytosis of activated receptors can concentrate receptors within endosomes and allow the insulin receptor to phosphorylate substrates that are spatially distinct from those accessible at the plasma membrane.","definition_xrefs":["GOC:bf","GOC:signaling","PMID:9609114"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of signal transduction by receptor internalization","termid":"GO:0038010"},{"relation_name":"is_a","term_name":"insulin receptor internalization","termid":"GO:0038016"},{"relation_name":"is_a","term_name":"positive regulation of insulin receptor signaling pathway","termid":"GO:0046628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0006810","GO:0016192","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"positive regulation of insulin receptor signaling pathway by insulin receptor internalization","synonyms":[{"name":"positive regulation of insulin receptor signalling pathway by insulin receptor internalization","type":"exact"}],"termid":"GO:0038015"}


id: PBO:0087369
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT methyltransferase; catalyzes omega-monomethylation of Rps3p on Arg-146; not an essential gene; predicted to be involved in rRNA processing and ribosome biogenesis and in biopolymer catabolism","termid":"PBO:0087369"}


id: PBO:0054509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1909","termid":"PBO:0054509"}


id: MONDO:0014834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete dyskinesia, limb and orofacial, infantile-onset (obsolete MONDO:0014834)","termid":"MONDO:0014834","xrefs":{"Monarch":{"xref_id":"0014834"}}}


id: FYPO:0002688
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a short mitotic spindle assembles, but does not elongate. The spindle pole bodies fail to separate, and often become spatially closer together, suggesting that the spindle shrinks.","definition_xrefs":["PMID:23885124","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abolished mitotic spindle elongation during prophase","termid":"FYPO:0006173"},{"relation_name":"is_a","term_name":"abolished mitotic spindle elongation during prophase","termid":"FYPO:0006173"},{"relation_name":"is_a","term_name":"mitotic spindle collapse","termid":"FYPO:0006475"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000054"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"part_of","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"part_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"part_of","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0000054"},{"rel_name":"part_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000337"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000641"},{"rel_name":"part_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000641","FYPO:0000337","FYPO:0000002","FYPO:0005447","FYPO:0001320","FYPO:0001985","FYPO:0000054"],"is_obsolete":false,"name":"mitotic spindle collapse without elongation during prophase","synonyms":[{"name":"SPB convergence","type":"exact"},{"name":"broken mitotic spindle without elongation during prophase","type":"related"},{"name":"mitotic spindle breakage without elongation during prophase","type":"related"},{"name":"mitotic spindle collapse without elongation during prophase during vegetative growth","type":"exact"},{"name":"spindle collapse without elongation during mitotic prophase","type":"exact"},{"name":"spindle collapse without elongation during prophase during mitotic cell cycle","type":"related"},{"name":"spindle pole body convergence","type":"exact"}],"termid":"FYPO:0002688"}


id: GO:0018700
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-chloro-N-isopropylacetanilide + H+ + 2 e- = Cl- + N-isopropylacetanilide.","definition_xrefs":["UM-BBD_reactionID:r0719"],"gene_count":0,"genotype_count":0,"name":"obsolete 2-chloro-N-isopropylacetanilide reductive dehalogenase activity (obsolete GO:0018700)","termid":"GO:0018700"}


id: GO:0061981
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-3-hydroxykynurenine + H2O = 3-hydroxyanthranilate + L-alanine.","definition_xrefs":["PMID:17300176"],"gene_count":0,"genotype_count":0,"name":"obsolete 3-hydroxykynureninase activity (obsolete GO:0061981)","termid":"GO:0061981"}


id: GO:0036145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of regulating the proliferation and elimination of dendritic cells such that the total number of dendritic cells within a whole or part of an organism is stable over time in the absence of an outside stimulus.","definition_xrefs":["CL:0000451","PMID:12570827","PMID:19176316","GOC:uh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte homeostasis","termid":"GO:0001776"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell homeostasis","synonyms":[{"name":"DC homeostasis","type":"related"}],"termid":"GO:0036145"}


id: PBO:0030556
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_import","termid":"PBO:0030556"}


id: GO:0018544
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-carboxy-4'-sulfoazobenzene + 4 H+ + 4 e- = 4-aminobenzoate + 4-aminobenzenesulfonate.","definition_xrefs":["UM-BBD_reactionID:r0543"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-carboxy-4'-sulfoazobenzene reductase activity (obsolete GO:0018544)","synonyms":[{"name":"4-carboxy-4'-sulphoazobenzene reductase activity","type":"exact"}],"termid":"GO:0018544"}


id: GO:2000650
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of sodium ion transmembrane transporter activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of sodium ion transmembrane transporter activity (obsolete GO:2000650)","synonyms":[{"name":"negative regulation of sodium transporter activity","type":"exact"}],"termid":"GO:2000650"}


id: PR:O94527
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A WD and tetratricopeptide repeats protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03590"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat protein iqw1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC609.03","secondary_identifiers":["UniProtKB:O94527"],"synonyms":[{"name":"Spom972h-WDTC1","type":"exact"}],"termid":"PR:O94527"}


id: PBO:0048998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glypican 6","termid":"PBO:0048998"}


id: GO:0044565
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The expansion of a dendritic cell population by cell division. A dendritic cell is a cell of hematopoietic origin, typically resident in particular tissues, specialized in the uptake, processing, and transport of antigens to lymph nodes for the purpose of stimulating an immune response via T cell activation.","definition_xrefs":["PMID:18469816","CL:0000451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mononuclear cell proliferation","termid":"GO:0032943"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dendritic cell proliferation","termid":"GO:0044565"}


id: RO:0002472
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between a piece of evidence a and some entity b, where b is  an information content entity, material entity or process, and \\nthe a supports either the existence of b, or the truth value of b.","direct_ancestors":[{"relation_name":"is_a","term_name":"related_via_evidence_or_inference_to","termid":"RO:0002616"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_evidence_for","termid":"RO:0002472"}


id: PR:O14322
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug100 gene.","definition_xrefs":["UniProtKB:O14322","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 100 protein, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC16E9.07","synonyms":[{"name":"Spom972h-mug100","type":"exact"}],"termid":"PR:O14322"}


id: SO:0001011
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Peptide nucleic acid, is a chemical not known to occur naturally but is artificially synthesized and used in some biological research and medical treatments. The PNA backbone is composed of repeating N-(2-aminoethyl)-glycine units linked by peptide bonds. The purine and pyrimidine bases are linked to the backbone by methylene carbonyl bonds.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"PNA","termid":"SO:0001184"},{"relation_name":"is_a","term_name":"synthetic_oligo","termid":"SO:0001247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNA_oligo","secondary_identifiers":["http://en.wikipedia.org/wiki/Peptide_nucleic_acid"],"synonyms":[{"name":"PNA oligo","type":"exact"},{"name":"peptide nucleic acid","type":"exact"}],"termid":"SO:0001011"}


id: PBO:0061364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 24","termid":"PBO:0061364"}


id: FYPO:0007844
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the monomethylation of lysine at position 9 of histone H3 in centromere inner repeat regions occurs to a greater extent than normal.","definition_xrefs":["PMID:17363370","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H3-K9 methylation at centromere during vegetative growth","termid":"FYPO:0005066"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0001320","FYPO:0002274","FYPO:0001985"],"is_obsolete":false,"name":"increased histone H3-K9 monomethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 monomethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 monomethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 monomethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 monomethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0007844"}


id: PBO:0043822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ceruloplasmin pseudogene","termid":"PBO:0043822"}


id: GO:0140209
data:
  {"annotated_genes":["SJAG_01803","SJAG_01078"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[95782,95783],"is_not":false,"summary":null,"term":"GO:0140209"}]},"cv_name":"biological_process","definition":"The directed import of zinc(2+) from the cytosol, across the endoplasmic reticulum membrane, into the endoplasmic reticulum.","definition_xrefs":["PMID:11886869","PMID:29529046"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytosol to endoplasmic reticulum transport","termid":"GO:0046967"},{"relation_name":"is_a","term_name":"zinc ion import into organelle","termid":"GO:0062111"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01078":null,"SJAG_01803":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"zinc ion import into endoplasmic reticulum","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"zinc ion import across endoplasmic reticulum","type":"exact"},{"name":"zinc ion import into ER","type":"exact"},{"name":"zinc(2+) import across endoplasmic reticulum","type":"exact"},{"name":"zinc(2+) import into endoplasmic reticulum","type":"exact"}],"termid":"GO:0140209","terms_by_termid":{"GO:0140209":null}}


id: PBO:0077340
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 79","termid":"PBO:0077340"}


id: PBO:0053816
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1077","termid":"PBO:0053816"}


id: PBO:0058482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5589","termid":"PBO:0058482"}


id: PBO:0109130
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 2","termid":"PBO:0109130"}


id: PBO:0044472
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 11 subfamily B member 1","termid":"PBO:0044472"}


id: PBO:0057069
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 150","termid":"PBO:0057069"}


id: PBO:0069825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1111, pseudogene","termid":"PBO:0069825"}


id: PBO:0045898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic elongation factor 2 kinase","termid":"PBO:0045898"}


id: PBO:0086936
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication","termid":"PBO:0086936"}


id: PR:000085718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe) that has been methylated on Lys-36. Example: UniProtKB:P09988, 2-136, Lys-37, MOD:00663.","definition_xrefs":["PMID:37459529","PomBase:VW","PRO:DAN"],"direct_ancestors":[{"relation_name":"has_part","term_name":"methylated lysine","termid":"MOD:00663"},{"relation_name":"is_a","term_name":"histone H3.2, initiator methionine removed form (Schizosaccharomyces pombe)","termid":"PR:000027580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hht2/Me(K36)","pombase_gene_id":"SPBC8D2.04","synonyms":[{"name":"PRO_0000221366, Lys-37, MOD:00663","type":"related"},{"name":"PomBase_original_PRO_term_name: histone H3.2, initiator methionine removed K36-methylated form (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-hht2/InitMet-/K36Me","type":"exact"},{"name":"UniProtKB:P09988, 2-136, Lys-37, MOD:00663","type":"related"},{"name":"hht2/Me(K36)","type":"exact"}],"termid":"PR:000085718"}


id: MONDO:0001133
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Essential hypertension with rapid progression to severe high blood pressure, papilledema, and renal failure.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"essential hypertension","termid":"MONDO:0001134"},{"relation_name":"is_a","term_name":"malignant hypertension","termid":"MONDO:0006846"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"malignant essential hypertension","secondary_identifiers":["NCIT:C34802","DOID:10823","MEDGEN:9866","SCTID:78975002","UMLS:C0024588","ICD9:401.0"],"synonyms":[{"name":"accelerated essential hypertension","type":"exact"},{"name":"malignant essential hypertension","type":"exact"}],"termid":"MONDO:0001133","xrefs":{"Monarch":{"xref_id":"0001133"}}}


id: MONDO:0015471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare epilepsy typically characterized by isolated focal motor and somatosensory seizures. Less frequently other focal seizure types, with or without secondary generalization, have been described. The seizures usually happen when the patient is awake and take a benign course. The condition is transitory, interictal examinations are normal, and there is usually no family history of epilepsy.","definition_xrefs":["Orphanet:1544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy syndrome","termid":"MONDO:0015650"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"benign focal seizures of adolescence","secondary_identifiers":["MEDGEN:896830","UMLS:C4275141","GARD:18728","icd11.foundation:1800285392","SCTID:715425000"],"synonyms":[{"name":"adolescent benign focal crisis","type":"exact"}],"termid":"MONDO:0015471","xrefs":{"Monarch":{"xref_id":"0015471"}}}


id: PBO:0049974
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HIG1 hypoxia inducible domain family member 1C","termid":"PBO:0049974"}


id: MONDO:0030518
data:
  {"annotated_genes":["SJAG_01159"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88086],"is_not":false,"summary":null,"term":"MONDO:0030518"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"trichothiodystrophy","termid":"MONDO:0018053"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01159":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"trichothiodystrophy 9, nonphotosensitive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794268","OMIM:619692","UMLS:C5562058","DOID:0061024"],"synonyms":[{"name":"TTD9","type":"exact"}],"termid":"MONDO:0030518","terms_by_termid":{"MONDO:0030518":null},"xrefs":{"Monarch":{"xref_id":"0030518"}}}


id: GO:0071728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of the beak over time from its initial formation until its mature state. The avian beak is an external anatomical structure, in the head region, that is adapted for feeding self and young, catching prey, probing, etc. It encompasses, but is not restricted to, the maxilla, mandible, maxillary rhamphotheca, mandibular rhamphotheca, nostril, nasal fossa, nasal bones, egg tooth and rictus.","definition_xrefs":["ISBN:0702008729","GOC:lp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"beak development","termid":"GO:0071728"}


id: PBO:0083446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified gene ATP14","termid":"PBO:0083446"}


id: PBO:0059451
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Myb/SANT DNA binding domain containing 3","termid":"PBO:0059451"}


id: PBO:0084746
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrially-encoded 50-kD subunit of Endo.SceI; dimeric site-specific endonuclease that introduces double-stranded breaks at a number of well-defined sites in mitochondrial DNA, inducing homologous recombination; has a 26-bp recognition sequence in ATP6","termid":"PBO:0084746"}


id: GO:0004448
data:
  {"annotated_genes":["SJAG_04362"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004450"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: isocitrate + NAD(P)+ = 2-oxoglutarate + CO2 + NAD(P)H.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04362":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"isocitrate dehydrogenase [NAD(P)+] activity","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"IDH activity","type":"related"},{"name":"IDP activity","type":"related"},{"name":"isocitrate dehydrogenase activity","type":"exact"},{"name":"isocitric acid dehydrogenase activity","type":"exact"},{"name":"isocitric dehydrogenase activity","type":"exact"},{"name":"oxalosuccinate carboxylase activity","type":"exact"},{"name":"oxalosuccinate decarboxylase activity","type":"exact"},{"name":"oxalosuccinic decarboxylase activity","type":"exact"}],"termid":"GO:0004448","terms_by_termid":{"GO:0004450":null}}


id: MONDO:1011918
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reproductive system disorder, non-human animal","termid":"MONDO:1011354"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetragametic chimerism, non-human animal","secondary_identifiers":["OMIA:000393"],"termid":"MONDO:1011918","xrefs":{"Monarch":{"xref_id":"1011918"}}}


id: GO:0035727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to lysophosphatidic acid (LPA), a phospholipid derivative that acts as a potent mitogen due to its activation of high-affinity G protein-coupled receptors.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid binding","termid":"GO:0005543"},{"relation_name":"is_a","term_name":"anion binding","termid":"GO:0043168"},{"relation_name":"is_a","term_name":"carbohydrate derivative binding","termid":"GO:0097367"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"lysophosphatidic acid binding","synonyms":[{"name":"LPA binding","type":"exact"}],"termid":"GO:0035727"}


id: PBO:0073643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 30, pseudogene","termid":"PBO:0073643"}


id: RO:0002607
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"c is marker for d iff the presence or occurrence of d is correlated with the presence of occurrence of c, and the observation of c is used to infer the presence or occurrence of d. Note that this does not imply that c and d are in a direct causal relationship, as it may be the case that there is a third entity e that stands in a direct causal relationship with c and d.","direct_ancestors":[{"relation_name":"is_a","term_name":"correlated_with","termid":"RO:0002610"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is_marker_for","termid":"RO:0002607"}


id: MONDO:0100248
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subset of primary central nervous system vasculitis where disease is rapidly progressive after onset that is characterized by bilateral, multiple, large cerebral vessel lesions and multiple CNS infarctions.","definition_xrefs":["PMID:20959356"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary central nervous system vasculitis","termid":"MONDO:0015374"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rapidly progressive primary central nervous system vasculitis","synonyms":[{"name":"rapidly progressive PCNSV","type":"exact"}],"termid":"MONDO:0100248","xrefs":{"Monarch":{"xref_id":"0100248"}}}


id: PR:Q9P7Q6
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mug51 gene.","definition_xrefs":["UniProtKB:Q9P7Q6","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotically up-regulated gene 51 protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1834.09","synonyms":[{"name":"Spom972h-mug51","type":"exact"}],"termid":"PR:Q9P7Q6"}


id: PBO:0043686
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COTL1 pseudogene 2","termid":"PBO:0043686"}


id: GO:0003294
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The reorganization or renovation of heart tissue that contributes to the maturation of the connection between an atrium and a ventricle.","definition_xrefs":["GOC:mtg_heart"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tissue remodeling","termid":"GO:0048771"},{"relation_name":"part_of","term_name":"heart morphogenesis","termid":"GO:0003007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"atrial ventricular junction remodeling","synonyms":[{"name":"atrial ventricular junction remodelling","type":"exact"},{"name":"atrio-ventricular junction remodeling","type":"related"},{"name":"atrioventricular junction remodeling","type":"exact"}],"termid":"GO:0003294"}


id: GO:0100059
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any transcription from RNA polymerase II promoter process that negatively regulates phenotypic switching.","definition_xrefs":["GOC:obol","GOC:cjm"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of phenotypic switching by transcription from RNA polymerase II promoter (obsolete GO:0100059)","termid":"GO:0100059"}


id: PBO:0049399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gametocyte specific factor 1 like","termid":"PBO:0049399"}


id: PBO:0030640
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_cell_following_anaerobic_growth","termid":"PBO:0030640"}


id: PBO:0070931
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 39","termid":"PBO:0070931"}


id: GO:0060852
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a cell to a specific fate and contributes to a cell adopting a venous endothelial cell fate.","definition_xrefs":["GOC:tb","GOC:dph","GOC:sdb_2009"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in venous endothelial cell fate commitment (obsolete GO:0060852)","termid":"GO:0060852"}


id: GO:0007282
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any of the rounds of incomplete mitosis undergone by a cystoblast to form a cyst of interconnected cells.","definition_xrefs":["PMID:21452446"],"direct_ancestors":[{"relation_name":"is_a","term_name":"asymmetric cell division","termid":"GO:0008356"},{"relation_name":"part_of","term_name":"germ cell development","termid":"GO:0007281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cystoblast division","synonyms":[{"name":"cystoblast cell division","type":"exact"}],"termid":"GO:0007282"}


id: PBO:0060749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADH:ubiquinone oxidoreductase subunit B2 pseudogene 2","termid":"PBO:0060749"}


id: GO:0102934
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: germacra-1(10),4,11(13)-trien-12-oate + O2 + NADPH + 2 H+ = costunolide + 2 H2O + NADP.","definition_xrefs":["GOC:pz","RHEA:28230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"costunolide synthase activity","secondary_identifiers":["MetaCyc:RXN-8971","EC:1.14.14.150"],"termid":"GO:0102934"}


id: PBO:0091677
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"in probabilistic modeling, the probability of entering mitosis increases as Cdc13 protein levels increase","termid":"PBO:0091677"}


id: PBO:0081756
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 687","termid":"PBO:0081756"}


id: GO:0003419
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of chondrocytes in a growing endochondral bone, resulting in the expansion of a cell population.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"},{"relation_name":"part_of","term_name":"growth plate cartilage development","termid":"GO:0003417"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"growth plate cartilage chondrocyte proliferation","termid":"GO:0003419"}


id: PR:O36016
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ypa1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O36016"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein phosphatase 2A activator 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.04","synonyms":[{"name":"PPIase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ypa1","type":"exact"},{"name":"peptidyl-prolyl cis-trans isomerase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"phosphotyrosyl phosphatase activator 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"rotamase PTPA-1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36016"}


id: PR:O74926
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rbd2 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74926"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhomboid protein 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC790.03","synonyms":[{"name":"Spom972h-rbd2","type":"exact"}],"termid":"PR:O74926"}


id: PBO:0065119
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase C substrate 80K-H","termid":"PBO:0065119"}


id: GO:0045257
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The enzyme that catalyzes the oxidation of succinate and ubiquinone to fumarate and ubiquinol; involved in aerobic respiration, repressed in anaerobic respiration.","definition_xrefs":["GOC:kd","ISBN:0198547684"],"gene_count":0,"genotype_count":0,"name":"obsolete succinate dehydrogenase complex (ubiquinone) (obsolete GO:0045257)","termid":"GO:0045257"}


id: PBO:0030971
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_dimethylation_at_centromere","termid":"PBO:0030971"}


id: MONDO:0006632
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Osteoarthritis of the hands usually happens as part of nodal osteoarthritis (a form of osteoarthritis that runs in families). This mainly affects women and often starts in your 40s or 50s, around the menopause (the time when menstruation ends and it’s no longer possible to have children).","definition_xrefs":["EFO:1000789"],"direct_ancestors":[{"relation_name":"is_a","term_name":"osteoarthritis","termid":"MONDO:0005178"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"osteoarthritis, hand","secondary_identifiers":["UMLS:C0263746","MEDGEN:472992"],"termid":"MONDO:0006632","xrefs":{"Monarch":{"xref_id":"0006632"}}}


id: PBO:0077318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 53","termid":"PBO:0077318"}


id: MONDO:0009420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by primary hypergonadotropic hypogonadism and partial alopecia.","definition_xrefs":["Orphanet:2232"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypergonadotropic hypogonadism-partial alopecia syndrome","secondary_identifiers":["UMLS:C2673480","MESH:C567109","ICD10CM:E28.3","GARD:16588","MEDGEN:388650","OMIM:241090","SCTID:719275009"],"synonyms":[{"name":"Al Awadi-Farag-Teebi syndrome","type":"exact"},{"name":"hypergonadotropic hypogonadism and partial alopecia","type":"related"}],"termid":"MONDO:0009420","xrefs":{"Monarch":{"xref_id":"0009420"}}}


id: PBO:0065124
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase D2","termid":"PBO:0065124"}


id: PATO:0000406
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A curvature quality inhering in a bearer by virtue of the bearer's having or being marked by a curve or smoothly rounded bend.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"curvature","termid":"PATO:0001591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"curved","synonyms":[{"name":"bowing","type":"narrow"},{"name":"curled","type":"related"}],"termid":"PATO:0000406"}


id: PR:P21565
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A signal recognition particle 54 kDa protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04701","PANTHER:PTHR11564:SF5","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal recognition particle 54 kDa protein homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC188.06c","secondary_identifiers":["UniProtKB:P21565"],"synonyms":[{"name":"SRP54 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-SRP54","type":"exact"}],"termid":"PR:P21565"}


id: PBO:0111838
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tudor domain","termid":"PBO:0111838"}


id: PBO:0075580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine peptidase inhibitor Kazal type 4","termid":"PBO:0075580"}


id: PBO:0060641
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear receptor coactivator 4","termid":"PBO:0060641"}


id: MONDO:0013066
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"46,XY complete gonadal dysgenesis","termid":"MONDO:0010765"},{"relation_name":"is_a","term_name":"46,XY partial gonadal dysgenesis","termid":"MONDO:0016674"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"46,XY sex reversal 3","secondary_identifiers":["MEDGEN:483746","UMLS:C3489793","DOID:0111772","GARD:15598","NANDO:1200405","OMIM:612965"],"synonyms":[{"name":"46,XY SEX reversal 3","type":"related"},{"name":"46,XY Sex reversal type 3","type":"exact"},{"name":"46,XY Sex reversal, partial or complete, Nr5A1-related","type":"related"},{"name":"46,XY gonadal dysgenesis, partial or complete, with or without adrenal failure","type":"related"},{"name":"46,XY sex reversal 3","type":"exact"},{"name":"46XY sex reversal 3","type":"exact"},{"name":"SRXY3","type":"related"},{"name":"Sex reversal, XY, with or without adrenal failure","type":"related"},{"name":"disorder of Sex development, 46,XY, Nr5A1-related","type":"related"}],"termid":"MONDO:0013066","xrefs":{"Monarch":{"xref_id":"0013066"}}}


id: PBO:0086364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative aldose 1-epimerase superfamily protein; non-essential gene; highly expressed under anaeorbic conditions","termid":"PBO:0086364"}


id: GO:1905303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of macropinocytosis.","definition_xrefs":["GOC:TermGenie","GOC:PARL","GOC:pad","GO_REF:0000058","PMID:18691641"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of pinocytosis","termid":"GO:0048549"},{"relation_name":"is_a","term_name":"regulation of macropinocytosis","termid":"GO:1905301"},{"relation_name":"positively_regulates","term_name":"macropinocytosis","termid":"GO:0044351"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0016192"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of macropinocytosis","synonyms":[{"name":"activation of macropinocytosis","type":"narrow"},{"name":"up regulation of macropinocytosis","type":"exact"},{"name":"up-regulation of macropinocytosis","type":"exact"},{"name":"upregulation of macropinocytosis","type":"exact"}],"termid":"GO:1905303"}


id: MONDO:0009218
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare sphingolipid disorder characterized by a spectrum of clinical signs ranging from the classical triad of painful and progressively deformed joints, subcutaneous nodules, and progressive hoarseness (due to laryngeal involvement) that presents in infancy, to varying phenotypes with respiratory and neurologic involvement.","definition_xrefs":["Orphanet:333"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"},{"relation_name":"is_a","term_name":"ASAH1-related sphingolipidosis","termid":"MONDO:0100524"},{"relation_name":"is_a","term_name":"ASAH1-related disorders","termid":"MONDO:0800460"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002561"},{"rel_name":"is_a","termid":"MONDO:0002525"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0002561","MONDO:0002525","MONDO:0005066"],"is_obsolete":false,"name":"Farber lipogranulomatosis","secondary_identifiers":["NANDO:2200565","UMLS:C0268255","NANDO:1200086","NCIT:C84710","GARD:6426","MEDGEN:78654","SCTID:79935000","DOID:0050464","ICD9:272.8","OMIM:228000","MESH:D055577"],"synonyms":[{"name":"AC deficiency","type":"related"},{"name":"FRBRL","type":"related"},{"name":"Farber disease","type":"exact"},{"name":"Farber lipogranulomatosis","type":"exact"},{"name":"Farber's disease","type":"related"},{"name":"N-LAURYLSPHINGOSINE deacylase deficiency","type":"exact"},{"name":"N-Laurylsphingosine deacylase deficiency","type":"related"},{"name":"acid ceramidase deficiency","type":"exact"},{"name":"ceramidase deficiency","type":"related"}],"termid":"MONDO:0009218","xrefs":{"Monarch":{"xref_id":"0009218"}}}


id: PBO:0065344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxiredoxin like 2A pseudogene 1","termid":"PBO:0065344"}


id: PBO:0113514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 snoRNP protein; component of the small (ribosomal) subunit (SSU) processosome containing U3 snoRNA; required for the biogenesis of18S rRNA; localizes to nucleolus and peroxisomes","termid":"PBO:0113514"}


id: PBO:0087650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the heterodimeric FACT complex (Spt16p-Pob3p); FACT associates with chromatin via interaction with Nhp6Ap and Nhp6Bp, and reorganizes nucleosomes to facilitate access to DNA by RNA and DNA polymerases; protein abundance increases in response to DNA replication stress","termid":"PBO:0087650"}


id: MONDO:0019124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microscopic polyangiitis (MPA) is an inflammatory, necrotizing, systemic vasculitis that affects predominantly small vessels (i.e. small arteries, arterioles, capillaries, venules) in multiple organs.","definition_xrefs":["Orphanet:727"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete secondary glomerular disease (obsolete MONDO:0019724)","termid":"MONDO:0019724"},{"relation_name":"is_a","term_name":"anti-neutrophil cytoplasmic antibody-associated vasculitis","termid":"MONDO:0015492"},{"relation_name":"is_a","term_name":"arteritis","termid":"MONDO:0043494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microscopic polyangiitis","secondary_identifiers":["ICD10CM:M31.7","icd11.foundation:999231798","NANDO:1200262","NCIT:C70549","MESH:D055953","UMLS:C2347126","GARD:3652","NANDO:2200426","MedDRA:10063344","SCTID:239928004","EFO:1000784","MEDGEN:389393"],"synonyms":[{"name":"MPA","type":"exact"},{"name":"Micropolyangiitis","type":"exact"},{"name":"microscopic polyarteritis","type":"exact"}],"termid":"MONDO:0019124","xrefs":{"Monarch":{"xref_id":"0019124"}}}


id: MONDO:1012113
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary hypoadrenocorticism, non-human animal","termid":"MONDO:1011676"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary hypoadrenocorticism, dog","secondary_identifiers":["OMIA:000520-9615"],"termid":"MONDO:1012113","xrefs":{"Monarch":{"xref_id":"1012113"}}}


id: MONDO:0016545
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Leukoencephalopathy-palmoplantar keratoderma syndrome is a rare, genetic epidermal disease characterized by early childhood-onset of punctate palmoplantar keratoderma in association with adult-onset leukoencephalopathy manifested by progressive tetrapyramidal syndrome and cognitive deterioration.","definition_xrefs":["Orphanet:2386"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025"],"is_obsolete":false,"name":"leukoencephalopathy-palmoplantar keratoderma syndrome","secondary_identifiers":["GARD:3232","MEDGEN:1652044","UMLS:C4749769"],"synonyms":[{"name":"leukoencephalopathy palmoplantar keratoderma","type":"related"}],"termid":"MONDO:0016545","xrefs":{"Monarch":{"xref_id":"0016545"}}}


id: GO:0140861
data:
  {"annotated_genes":["SJAG_03230","SJAG_04097","SJAG_04613","SJAG_01611","SJAG_04190","SJAG_04272","SJAG_03145","SJAG_00783","SJAG_03792","SJAG_05282","SJAG_02698","SJAG_00349","SJAG_01385","SJAG_04793","SJAG_02500","SJAG_02198","SJAG_02439","SJAG_03579","SJAG_04989","SJAG_02990","SJAG_00187","SJAG_02701","SJAG_04039","SJAG_03628","SJAG_00045","SJAG_02303"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74365,75749,90880,92701,94382,94802,96313,96617,96841,97081,99229,100917,100976,101151,101402,101689,106052,106239,106742,108909,109762,111106,115204,116773,117661,120646],"is_not":false,"summary":null,"term":"GO:0140861"}]},"cv_name":"biological_process","definition":"A chromatin remodeling process that allows DNA repair enzyme to access genomic DNA and repair DNA lesions.","definition_xrefs":["PMID:29095668","PMID:35689883","PMID:15528408","PMID:28053344"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromatin remodeling","termid":"GO:0006338"},{"relation_name":"part_of","term_name":"DNA damage response","termid":"GO:0006974"}],"gene_count":26,"genes_by_uniquename":{"SJAG_00045":null,"SJAG_00187":null,"SJAG_00349":null,"SJAG_00783":null,"SJAG_01385":null,"SJAG_01611":null,"SJAG_02198":null,"SJAG_02303":null,"SJAG_02439":null,"SJAG_02500":null,"SJAG_02698":null,"SJAG_02701":null,"SJAG_02990":null,"SJAG_03145":null,"SJAG_03230":null,"SJAG_03579":null,"SJAG_03628":null,"SJAG_03792":null,"SJAG_04039":null,"SJAG_04097":null,"SJAG_04190":null,"SJAG_04272":null,"SJAG_04613":null,"SJAG_04793":null,"SJAG_04989":null,"SJAG_05282":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006325"}],"interesting_parent_ids":["GO:0008150","GO:0006325"],"is_obsolete":false,"name":"DNA repair-dependent chromatin remodeling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA damage-dependent chromatin remodelling","type":"exact"}],"termid":"GO:0140861","terms_by_termid":{"GO:0140861":null}}


id: PBO:0039553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ankyrin repeat domain 49","termid":"PBO:0039553"}


id: PBO:0061761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-5'-oligoadenylate synthetase like","termid":"PBO:0061761"}


id: MOD:01754
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces the N6'-hydrogen atom of a lysine residue with the Proteome Sciences TMT6plex-130 reporter+balance group.","definition_xrefs":["Unimod:737#K"],"direct_ancestors":[{"relation_name":"is_a","term_name":"TMT6plex reporter+balance reagent N-acylated residue","termid":"MOD:01717"},{"relation_name":"is_a","term_name":"TMT6plex-130 reporter+balance reagent acylated residue","termid":"MOD:01752"},{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"}],"interesting_parent_ids":["MOD:01875"],"is_obsolete":false,"name":"TMT6plex-130 reporter+balance reagent N6-acylated lysine","synonyms":[{"name":"3-[(2,6-dimethylpiperidin-1-yl)acetyl]amino)propanoyl","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"}],"termid":"MOD:01754"}


id: PBO:0066845
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 145","termid":"PBO:0066845"}


id: PBO:0091248
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-1,3-galactosyltransferase Otg1","termid":"PBO:0091248"}


id: GO:0018826
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-methionine = methanethiol + NH3 + 2-oxobutanoate.","definition_xrefs":["EC:4.4.1.11","RHEA:23800"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-sulfur lyase activity","termid":"GO:0016846"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016829"],"is_obsolete":false,"name":"methionine gamma-lyase activity","secondary_identifiers":["MetaCyc:METHIONINE-GAMMA-LYASE-RXN","UM-BBD_reactionID:r0432"],"synonyms":[{"name":"L-methioninase activity","type":"related"},{"name":"L-methionine gamma-lyase activity","type":"related"},{"name":"L-methionine methanethiol-lyase (deaminating)","type":"related"},{"name":"L-methionine methanethiol-lyase (deaminating; 2-oxobutanoate-forming)","type":"related"},{"name":"methioninase activity","type":"related"},{"name":"methionine dethiomethylase activity","type":"related"},{"name":"methionine lyase activity","type":"related"}],"termid":"GO:0018826"}


id: GO:0072701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a bismuth (Bi) stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular response to chemical stimulus","termid":"GO:0070887"},{"relation_name":"is_a","term_name":"response to bismuth","termid":"GO:0072700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to bismuth","synonyms":[{"name":"cellular response to bismuth ion","type":"exact"}],"termid":"GO:0072701"}


id: PBO:0046963
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAM83A antisense RNA 2","termid":"PBO:0046963"}


id: PBO:0068162
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 469","termid":"PBO:0068162"}


id: PBO:0071386
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L30 pseudogene 9","termid":"PBO:0071386"}


id: PBO:0090757
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diphthamide synthetase Dph6","termid":"PBO:0090757"}


id: GO:0072546
data:
  {"annotated_genes":["SJAG_01999","SJAG_01127","SJAG_02437","SJAG_02914","SJAG_04294","SJAG_00277","SJAG_01223","SJAG_02065"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74029,76653,77537,79095,80358,82290,93681,103211],"is_not":false,"summary":null,"term":"GO:0072546"}]},"cv_name":"cellular_component","definition":"A transmembrane protein complex located in the endoplasmic reticulum (ER) involved in the insertion of newly synthesized proteins in the membrane of the ER. In S. cerevisiae, it has six members: EMC1, EMC2, AIM27, EMC4, KRE27, and EMC6.","definition_xrefs":["PMID:32459176","PMID:29242231","PMID:30415835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00277":null,"SJAG_01127":null,"SJAG_01223":null,"SJAG_01999":null,"SJAG_02065":null,"SJAG_02437":null,"SJAG_02914":null,"SJAG_04294":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005783","GO:0005789","GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"EMC complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"ER membrane protein complex","type":"broad"},{"name":"endoplasmic reticulum membrane protein complex","type":"broad"}],"termid":"GO:0072546","terms_by_termid":{"GO:0072546":null}}


id: PBO:0044823
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defensin beta 109F (pseudogene)","termid":"PBO:0044823"}


id: PR:P87120
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ribonuclease P protein subunit p30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00574","PRO:DNx","PANTHER:PTHR13031:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribonuclease P protein subunit 3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC3A12.04c","secondary_identifiers":["UniProtKB:P87120"],"synonyms":[{"name":"Spom972h-RPP30","type":"exact"}],"termid":"PR:P87120"}


id: MONDO:0975800
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant cerebellar ataxia","termid":"MONDO:0020380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0002039","MONDO:0005559","MONDO:0000426"],"is_obsolete":false,"name":"spinocerebellar ataxia 51","secondary_identifiers":["OMIM:620947"],"termid":"MONDO:0975800","xrefs":{"Monarch":{"xref_id":"0975800"}}}


id: MONDO:0003964
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by non-neoplastic bone formation in soft tissues. It usually follows blunt trauma and bleeding in the deep soft tissues.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myositis disease","termid":"MONDO:0021167"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"myositis ossificans","secondary_identifiers":["icd11.foundation:635062595","MESH:D009221","NANDO:2201020","NANDO:1200871","UMLS:C0027122","NCIT:C3253","DOID:668","MEDGEN:6503"],"synonyms":[{"name":"FOP","type":"exact"},{"name":"Myisitis ossificans","type":"exact"},{"name":"fibrodysplasia ossificans progressiva","type":"related"},{"name":"myositis ossificans progressiva","type":"exact"},{"name":"ossification - muscle","type":"exact"},{"name":"progressive myositis ossificans","type":"narrow"},{"name":"progressive ossifying myositis","type":"narrow"}],"termid":"MONDO:0003964","xrefs":{"Monarch":{"xref_id":"0003964"}}}


id: MONDO:1012569
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatocellular fibrinogen storage disease, non-human animal","termid":"MONDO:1011782"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hepatocellular fibrinogen storage disease, cattle","secondary_identifiers":["OMIA:002582-9913"],"termid":"MONDO:1012569","xrefs":{"Monarch":{"xref_id":"1012569"}}}


id: PBO:0080187
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vitamin D receptor","termid":"PBO:0080187"}


id: PBO:0091081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine protein kinase Ppk21/Pdk1","termid":"PBO:0091081"}


id: PBO:0091432
data:
  {"annotation_feature_type":"gene","cv_name":"cat_act","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kcat for base excision activity of 1,N(6)-ethenoadenine = 5.3 x 10^-3 s-1","termid":"PBO:0091432"}


id: MONDO:0002543
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An oligodendroglioma occurring during adulthood.","definition_xrefs":["NCIT:C4014"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oligodendroglioma","termid":"MONDO:0016695"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adult oligodendroglioma","secondary_identifiers":["MEDGEN:75924","NANDO:2200089","UMLS:C0279070","DOID:3186"],"synonyms":[{"name":"adult brain oligodendroglioma","type":"narrow"},{"name":"adult oligodendroglioma","type":"exact"},{"name":"grade II adult oligodendroglial tumor","type":"exact"},{"name":"grade II adult oligodendroglial tumour","type":"exact"},{"name":"oligodendroglioma","type":"broad"},{"name":"oligodendroglioma of adults","type":"exact"}],"termid":"MONDO:0002543","xrefs":{"Monarch":{"xref_id":"0002543"}}}


id: GO:0071718
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed, sodium-independent, movement of icosanoids into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Icosanoids are unsaturated C20 fatty acids and skeletally related compounds.","definition_xrefs":["GOC:mah","GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"icosanoid transport","termid":"GO:0071715"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"sodium-independent icosanoid transport","synonyms":[{"name":"sodium-independent eicosanoid transport","type":"exact"}],"termid":"GO:0071718"}


id: GO:0007397
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The generation of organized tissues or of whole organs.","definition_xrefs":["GOC:ems"],"gene_count":0,"genotype_count":0,"name":"obsolete histogenesis and organogenesis (obsolete GO:0007397)","synonyms":[{"name":"histogenesis and organogenesis","type":"exact"}],"termid":"GO:0007397"}


id: PATO:0000537
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000537 acid sensitivity value (obsolete PATO:0000537)","termid":"PATO:0000537"}


id: PBO:0089428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"candidate S. pombe Mug125 ortholog, syntenic position, intrinsically disordered protein","termid":"PBO:0089428"}


id: GO:0103074
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD + D-glucopyranose 6-phosphate = NADH + H+ + 3-dehydro-D-glucose 6-phosphate.","definition_xrefs":["RHEA:37547","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"glucose-6-phosphate 3-dehydrogenase activity","secondary_identifiers":["EC:1.1.1.361","MetaCyc:RXN8J2-136"],"termid":"GO:0103074"}


id: PR:O36017
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lip2 gene.","definition_xrefs":["UniProtKB:O36017","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"octanoyltransferase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC4F10.05c","synonyms":[{"name":"Spom972h-lip2","type":"exact"},{"name":"lipoate biosynthesis protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoate-protein ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoyl ligase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"lipoyl/octanoyl transferase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"octanoyl-[acyl-carrier-protein]-protein N-octanoyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O36017"}


id: PBO:0047288
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FANK1 antisense RNA 1","termid":"PBO:0047288"}


id: GO:0031332
data:
  {"annotated_genes":["SJAG_03916","SJAG_04061","SJAG_03706","SJAG_02621","SJAG_02594","SJAG_03042"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[66038],"is_not":false,"summary":null,"term":"GO:0031332"},{"annotations":[63929,90780,120155],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033167"},{"annotations":[114264,120161,93278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030958"}]},"cv_name":"cellular_component","definition":"Any protein complex that mediates the effects of small interfering RNAs on gene expression. Most known examples contain one or more members of the Argonaute family of proteins.","definition_xrefs":["GOC:mah","PMID:14704433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex","termid":"GO:1990904"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02594":null,"SJAG_02621":null,"SJAG_03042":null,"SJAG_03706":null,"SJAG_03916":null,"SJAG_04061":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNAi effector complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000107":null},"termid":"GO:0031332","terms_by_termid":{"GO:0030958":null,"GO:0031332":null,"GO:0033167":null}}


id: GO:0050567
data:
  {"annotated_genes":["SJAG_02721","SJAG_01577","SJAG_05560"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73750,77097,120482],"is_not":false,"summary":null,"term":"GO:0050567"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: L-glutamine + glutamyl-tRNA(Gln) + ATP = L-glutamate + glutaminyl-tRNA(Gln) + phosphate + ADP.","definition_xrefs":["EC:6.3.5.7","MetaCyc:6.3.5.7-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a tRNA","termid":"GO:0140101"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01577":null,"SJAG_02721":null,"SJAG_05560":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140101"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0003824","GO:0016874","GO:0140101"],"is_obsolete":false,"name":"glutaminyl-tRNA synthase (glutamine-hydrolyzing) activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0008264","RHEA:17521","GO:0017068","Wikipedia:Glutaminyl-tRNA_synthase_(glutamine-hydrolysing)"],"synonyms":[{"name":"Glu-AdT activity","type":"related"},{"name":"Glu-tRNA(Gln) amidotransferase activity","type":"related"},{"name":"Glu-tRNAGln amidotransferase activity","type":"related"},{"name":"Glu-tRNAGln:L-glutamine amido-ligase (ADP-forming)","type":"related"},{"name":"glutaminyl-tRNA synthase (glutamine-hydrolysing)","type":"related"},{"name":"glutamyl-tRNA(Gln) amidotransferase activity","type":"related"},{"name":"glutamyl-tRNAGln amidotransferase activity","type":"related"},{"name":"glutamyl-tRNAGln:L-glutamine amido-ligase (ADP-forming)","type":"related"}],"termid":"GO:0050567","terms_by_termid":{"GO:0050567":null}}


id: PBO:0029746
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_calcium_export","termid":"PBO:0029746"}


id: PBO:0075657
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spectrin alpha, non-erythrocytic 1","termid":"PBO:0075657"}


id: GO:0008464
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of a gamma-glutamyl bond to release an unsubstituted C-terminal amino acid.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-glutamyl hydrolase activity (obsolete GO:0008464)","synonyms":[{"name":"gamma-glutamyl hydrolase activity","type":"exact"}],"termid":"GO:0008464"}


id: GO:1900332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methane biosynthetic process from trimethylamine.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of amine metabolic process","termid":"GO:0033240"},{"relation_name":"is_a","term_name":"regulation of methane biosynthetic process from trimethylamine","termid":"GO:1900330"},{"relation_name":"is_a","term_name":"positive regulation of alkane biosynthetic process","termid":"GO:1901579"},{"relation_name":"is_a","term_name":"positive regulation of cellular respiration","termid":"GO:1901857"},{"relation_name":"positively_regulates","term_name":"methane biosynthetic process from trimethylamine","termid":"GO:2001130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006091"},{"rel_name":"regulates","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0008150","GO:0006091"],"is_obsolete":false,"name":"positive regulation of methane biosynthetic process from trimethylamine","synonyms":[{"name":"activation of methane biosynthetic process from trimethylamine","type":"narrow"},{"name":"up regulation of methane biosynthetic process from trimethylamine","type":"exact"},{"name":"up-regulation of methane biosynthetic process from trimethylamine","type":"exact"},{"name":"upregulation of methane biosynthetic process from trimethylamine","type":"exact"}],"termid":"GO:1900332"}


id: PBO:0060461
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAIP pseudogene 4","termid":"PBO:0060461"}


id: PR:O60156
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tRNA-splicing endonuclease subunit Sen34 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR13070:SF0","PRO:DNx","OMA:SCHPO03440"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-splicing endonuclease subunit sen34 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19C7.07c","secondary_identifiers":["UniProtKB:O60156"],"synonyms":[{"name":"Spom972h-TSEN34","type":"exact"},{"name":"tRNA-intron endonuclease sen34 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60156"}


id: PBO:0003474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3-keto sterol reductase (predicted)","termid":"PBO:0003474"}


id: GO:0009732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a hexose is received and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to hexose","termid":"GO:0009746"},{"relation_name":"is_a","term_name":"detection of monosaccharide stimulus","termid":"GO:0034287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of hexose stimulus","synonyms":[{"name":"perception of hexose stimulus","type":"related"}],"termid":"GO:0009732"}


id: MONDO:0004722
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Wiskott-Aldrich syndrome (obsolete MONDO:0004722)","termid":"MONDO:0004722","xrefs":{"Monarch":{"xref_id":"0004722"}}}


id: PBO:0060628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NCKAP5 antisense RNA 2","termid":"PBO:0060628"}


id: PBO:0026927
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_serine_phosphorylation","termid":"PBO:0026927"}


id: PBO:0079987
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"USP9Y pseudogene 25","termid":"PBO:0079987"}


id: GO:0032732
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-1 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-1 production","termid":"GO:0032652"},{"relation_name":"positively_regulates","term_name":"interleukin-1 production","termid":"GO:0032612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-1 production","secondary_identifiers":["GO:0045362","GO:0050716"],"synonyms":[{"name":"activation of interleukin-1 production","type":"narrow"},{"name":"positive regulation of IL-1 production","type":"exact"},{"name":"positive regulation of interleukin-1 biosynthetic process","type":"narrow"},{"name":"positive regulation of interleukin-1 secretion","type":"narrow"},{"name":"stimulation of interleukin-1 production","type":"narrow"},{"name":"up regulation of interleukin-1 production","type":"exact"},{"name":"up-regulation of interleukin-1 production","type":"exact"},{"name":"upregulation of interleukin-1 production","type":"exact"}],"termid":"GO:0032732"}


id: GO:0004122
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-serine + L-homocysteine = cystathionine + H2O.","definition_xrefs":["EC:4.2.1.22"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydro-lyase activity","termid":"GO:0016836"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016829"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"cystathionine beta-synthase activity","secondary_identifiers":["MetaCyc:CYSTATHIONINE-BETA-SYNTHASE-RXN","RHEA:10112","Reactome:R-HSA-1614524"],"synonyms":[{"name":"L-serine hydro-lyase (adding homocysteine)","type":"related"},{"name":"L-serine hydro-lyase (adding homocysteine; L-cystathionine-forming)","type":"related"},{"name":"beta-thionase activity","type":"related"},{"name":"methylcysteine synthase activity","type":"related"},{"name":"serine sulfhydrase activity","type":"related"},{"name":"serine sulfhydrylase activity","type":"related"}],"termid":"GO:0004122"}


id: PBO:0076168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 1A member 4","termid":"PBO:0076168"}


id: MONDO:1011631
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"stringhalt, non-human animal","secondary_identifiers":["OMIA:000950"],"termid":"MONDO:1011631","xrefs":{"Monarch":{"xref_id":"1011631"}}}


id: GO:0000076
data:
  {"annotated_genes":["SJAG_01010","SJAG_00364","SJAG_03695","SJAG_04671","SJAG_01205","SJAG_02266","SJAG_03160","SJAG_03026","SJAG_01044","SJAG_01076","SJAG_01605","SJAG_02098","SJAG_02563","SJAG_02074","SJAG_03927","SJAG_04287","SJAG_02771"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93439,108647,118118],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033315"},{"annotations":[118864,118120,111361,95974,80874,93440,74283,101203,114091,108650,81464,119170,73072,102559,119343,101369,76854],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033314"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a DNA replication checkpoint, that prevents the initiation of nuclear division until DNA replication is complete, thereby ensuring that progeny inherit a full complement of the genome.","definition_xrefs":["GOC:curators","GOC:rn","PMID:12537518","PMID:11728327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA integrity checkpoint signaling","termid":"GO:0031570"}],"gene_count":17,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_01010":null,"SJAG_01044":null,"SJAG_01076":null,"SJAG_01205":null,"SJAG_01605":null,"SJAG_02074":null,"SJAG_02098":null,"SJAG_02266":null,"SJAG_02563":null,"SJAG_02771":null,"SJAG_03026":null,"SJAG_03160":null,"SJAG_03695":null,"SJAG_03927":null,"SJAG_04287":null,"SJAG_04671":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0023052","GO:0008150","GO:0007049"],"is_obsolete":false,"name":"DNA replication checkpoint signaling","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["GO:0072437"],"synonyms":[{"name":"DNA replication checkpoint","type":"exact"},{"name":"signal transduction involved in DNA replication checkpoint","type":"exact"}],"termid":"GO:0000076","terms_by_termid":{"GO:0033314":null,"GO:0033315":null}}


id: FYPO:0004074
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of cell cycle arrest in response to a pheromone occurs in G1 phase, but begins later than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased mitotic cell cycle arrest in response to pheromone","termid":"FYPO:0000532"},{"relation_name":"is_a","term_name":"abnormal cell cycle arrest in mitotic G1 phase","termid":"FYPO:0005097"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000298"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000631","FYPO:0001985","FYPO:0005447","FYPO:0000298","FYPO:0001320"],"is_obsolete":false,"name":"delayed onset of cell cycle arrest in mitotic G1 phase in response to pheromone","synonyms":[{"name":"delayed cell cycle arrest in mitotic G1 phase in response to pheromone","type":"exact"},{"name":"delayed onset of cell cycle arrest in mitotic G1 phase during cellular response to pheromone","type":"exact"},{"name":"delayed onset of mitotic G1 arrest in response to pheromone","type":"exact"},{"name":"delayed onset of mitotic cell cycle arrest in G1 phase in response to pheromone","type":"exact"},{"name":"delayed onset of pheromone-induced G1 arrest","type":"exact"}],"termid":"FYPO:0004074"}


id: FYPO:0006156
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to sodium arsenite (AsNaO2). Cells stop growing (and may die) at a concentration of sodium arsenite that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to arsenic","termid":"FYPO:0000093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0000003","FYPO:0005447","FYPO:0002683","FYPO:0001985"],"is_obsolete":false,"name":"sensitive to sodium arsenite","synonyms":[{"name":"hypersensitive to sodium arsenite","type":"exact"},{"name":"sensitive to AsNaO2","type":"exact"},{"name":"sensitive to sodium arsenite during mitotic cell cycle","type":"related"},{"name":"sensitive to sodium arsenite during vegetative growth","type":"exact"}],"termid":"FYPO:0006156"}


id: FYPO:0008395
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to ferrous iron ions. Cells stop growing (and may die) at a concentration of iron ions that allows wild type cells to grow.","definition_xrefs":["PMID:35657410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to iron","termid":"FYPO:0005825"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000139","FYPO:0002683","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to ferrous iron","termid":"FYPO:0008395"}


id: GO:0106321
data:
  {"annotated_genes":["SJAG_01457"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105493],"is_not":false,"summary":null,"term":"GO:0106321"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: S-(hydroxymethyl)glutathione + NADP+ = S-formylglutathione + NADPH + H+.","definition_xrefs":["RHEA:19981"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-(hydroxymethyl)glutathione dehydrogenase [NAD(P)+] activity","termid":"GO:0051903"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01457":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"S-(hydroxymethyl)glutathione dehydrogenase (NADP+) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0106321","terms_by_termid":{"GO:0106321":null}}


id: PR:000085737
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit rpb1 CTD-phosphorylated form (Schizosaccharomyces pombe) that has been post-translationally modified to include phosphoserine at the fifth and seventh positions of one or more of the C-terminal heptad repeats (YSPTSPS).","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:26264592"],"direct_ancestors":[{"relation_name":"is_a","term_name":"rpb1/Phos(CTD-S2,S5,S7)","termid":"PR:000050494"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rpb1/Phos(CTD-S5,S7)","pombase_gene_id":"SPBC28F2.12","synonyms":[{"name":"PomBase_original_PRO_term_name: DNA-directed RNA polymerase II subunit rpb1 phosphorylated 4 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-rpb1/Phos:4","type":"exact"},{"name":"rpb1/Phos(CTD-S5,S7)","type":"exact"}],"termid":"PR:000085737"}


id: GO:0042902
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of linking a protein to peptidoglycan via a carboxy terminal threonine carboxyl group through a pentaglycyl peptide to the lysine or diaminopimelic acid of the peptidoglycan.","definition_xrefs":["RESID:AA0345"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidoglycan-protein cross-linking via L-threonyl-pentaglycyl-murein (obsolete GO:0042902)","termid":"GO:0042902"}


id: GO:1903127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of centriole-centriole cohesion.","definition_xrefs":["GO_REF:0000058","GOC:als","GOC:TermGenie","PMID:24554434"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of centriole-centriole cohesion","termid":"GO:0030997"},{"relation_name":"is_a","term_name":"positive regulation of cell cycle process","termid":"GO:0090068"},{"relation_name":"positively_regulates","term_name":"centriole-centriole cohesion","termid":"GO:0010457"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0007049","GO:0007010"],"is_obsolete":false,"name":"positive regulation of centriole-centriole cohesion","synonyms":[{"name":"activation of centriole-centriole cohesion","type":"narrow"},{"name":"up regulation of centriole-centriole cohesion","type":"exact"},{"name":"up-regulation of centriole-centriole cohesion","type":"exact"},{"name":"upregulation of centriole-centriole cohesion","type":"exact"}],"termid":"GO:1903127"}


id: GO:0160121
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 3-acyl-sn-glycero-1-phospho-(1'-sn-glycerol) = 3-acyl-sn-glycero-1-phospho-(3'-acyl-1'-sn-glycerol) + sn-glycero-1-phospho-(1'-sn-glycerol).","definition_xrefs":["RHEA:77619","PMID:37708259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acyltransferase activity, transferring groups other than amino-acyl groups","termid":"GO:0016747"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"bis(monoacylglycero)phosphate synthase activity","termid":"GO:0160121"}


id: PBO:0031631
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_ascospore_wall_biogenesis","termid":"PBO:0031631"}


id: MONDO:1011448
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fanconi syndrome that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Fanconi syndrome, non-human animal","secondary_identifiers":["OMIA:000366"],"termid":"MONDO:1011448","xrefs":{"Monarch":{"xref_id":"1011448"}}}


id: GO:0036361
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the interconversion of the two enantiomers of a chiral amino acid or amino acid derivative.","definition_xrefs":["GOC:crds"],"gene_count":0,"genotype_count":0,"name":"obsolete racemase activity, acting on amino acids and derivatives (obsolete GO:0036361)","termid":"GO:0036361"}


id: PBO:0066643
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulating synaptic membrane exocytosis 1","termid":"PBO:0066643"}


id: PBO:0114074
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 5C, pseudogene","termid":"PBO:0114074"}


id: PBO:0027028
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_telomere_during_meiotic_cell_cycle","termid":"PBO:0027028"}


id: PBO:0004755
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"equivalent function in S. cerevisiae is performed by STE12, but this is STE-like not HMG","termid":"PBO:0004755"}


id: GO:0098745
data:
  {"annotated_genes":["SJAG_05010","SJAG_05694","SJAG_01746"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[93335,93563,111930],"is_not":false,"summary":null,"term":"GO:0098745"}]},"cv_name":"cellular_component","definition":"A protein complex consisting of a Dcp1 regulatory subunit and a Dcp2 catalytic subunit that has mRNA cap binding activity and is involved in decapping of nuclear-transcribed mRNA.","definition_xrefs":["GOC:vw","PMID:22323607","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":3,"genes_by_uniquename":{"SJAG_01746":null,"SJAG_05010":null,"SJAG_05694":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"RNA decapping complex","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"Dcp1-Dcp2 complex","type":"exact"}],"termid":"GO:0098745","terms_by_termid":{"GO:0098745":null}}


id: PBO:0084836
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial pyrimidine nucleotide transporter; imports pyrimidine nucleoside triphosphates and exports pyrimidine nucleoside monophosphates; member of the mitochondrial carrier family","termid":"PBO:0084836"}


id: GO:0060288
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a lineage restriction boundary within a developing tissue which does not correspond to some morphological barrier.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"compartment pattern specification","termid":"GO:0007386"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"formation of a compartment boundary","synonyms":[{"name":"compartment boundary formation","type":"exact"}],"termid":"GO:0060288"}


id: MONDO:0013035
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Orofaciodigital syndrome type 11 is an extremely rare, sporadic form of Orofaciodigital syndrome (OFDS) with only a few reported cases, and characterized by facial (blepharophimosis, bulbous nasal tip, broad nasal bridge, downslanting palpebral fissures and low set ears) and skeletal (post-axial polydactyly and fusion of vertebrae) malformations along with severe intellectual disability, deafness and congenital heart defects.","definition_xrefs":["Orphanet:141000"],"direct_ancestors":[{"relation_name":"is_a","term_name":"orofaciodigital syndrome","termid":"MONDO:0015375"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"orofaciodigital syndrome XI","secondary_identifiers":["SCTID:718681002","MESH:C557821","UMLS:C2752048","OMIM:612913","DOID:0060381","GARD:4118","MEDGEN:416694"],"synonyms":[{"name":"Gabrielli syndrome","type":"related"},{"name":"OFD syndrome 11","type":"related"},{"name":"OFD11","type":"exact"},{"name":"Ofds 11","type":"related"},{"name":"oral facial digital syndrome 11","type":"related"},{"name":"oral facial digital syndrome type 11","type":"related"},{"name":"oral-Facial-digital syndrome with skeletal anomalies","type":"related"},{"name":"oral-Facial-digital syndrome, type 11","type":"related"},{"name":"oral-facial-digital syndrome type 11","type":"exact"},{"name":"oral-facial-digital syndrome, Gabrielli type","type":"exact"},{"name":"orofaciodigital syndrome 11","type":"related"},{"name":"orofaciodigital syndrome XI","type":"exact"},{"name":"orofaciodigital syndrome type 11","type":"related"},{"name":"orofaciodigital syndrome type XI","type":"exact"},{"name":"orofaciodigital syndrome, Gabrielli type","type":"exact"}],"termid":"MONDO:0013035","xrefs":{"Monarch":{"xref_id":"0013035"}}}


id: GO:0120342
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The short portion of the radial spoke 3 (RS3 )that is directly anchored to the A microtubule of an axonemal microtubule doublet.","definition_xrefs":["PMID:22754630","GOC:krc","PMID:25694453"],"direct_ancestors":[{"relation_name":"is_a","term_name":"radial spoke base","termid":"GO:0120339"},{"relation_name":"part_of","term_name":"radial spoke 3","termid":"GO:0120335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"radial spoke base 3","termid":"GO:0120342"}


id: GO:0035868
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that consists of an alphav-beta3 integrin complex bound to high mobility group box 1 protein.","definition_xrefs":["GOC:ebc","PMID:20826760","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane protein complex","termid":"GO:0098797"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005575","GO:0032991","GO:0005886"],"is_obsolete":false,"name":"alphav-beta3 integrin-HMGB1 complex","synonyms":[{"name":"alphav-beta3 integrin-high mobility group box 1 complex","type":"exact"}],"termid":"GO:0035868"}


id: MONDO:0043771
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cutaneous inflammatory reaction occurring as a result of exposure to biologically effective levels of ionizing radiation.","definition_xrefs":["NCIT:C3349"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dermatitis","termid":"MONDO:0002406"},{"relation_name":"is_a","term_name":"radiation-induced disorder","termid":"MONDO:0043459"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"radiodermatitis","secondary_identifiers":["ICD10WHO:L58","ICD10CM:L58","MESH:D011855","SCTID:49084001"],"synonyms":[{"name":"Dermatitides, radiation recall","type":"related"},{"name":"Dermatitides, radiation-induced","type":"related"},{"name":"Radiodermatitides","type":"related"},{"name":"dermatitis radiation","type":"exact"},{"name":"dermatitis, radiation induced","type":"related"},{"name":"dermatitis, radiation recall","type":"related"},{"name":"dermatitis, radiation-induced","type":"related"},{"name":"radiation dermatitis","type":"exact"},{"name":"radiation induced dermatitis","type":"related"},{"name":"radiation recall Dermatitides","type":"related"},{"name":"radiation recall dermatitis","type":"related"},{"name":"radiation recall reaction","type":"related"},{"name":"radiation recall reactions","type":"related"},{"name":"radiation-induced Dermatitides","type":"related"},{"name":"radiation-induced dermatitis","type":"exact"},{"name":"radiodermatitis","type":"exact"},{"name":"reaction, radiation recall","type":"related"},{"name":"reactions, radiation recall","type":"related"},{"name":"recall reaction, radiation","type":"related"},{"name":"recall reactions, radiation","type":"related"}],"termid":"MONDO:0043771","xrefs":{"Monarch":{"xref_id":"0043771"}}}


id: PBO:0056484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MATR3 pseudogene 1","termid":"PBO:0056484"}


id: MONDO:0004762
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Taylor syndrome","secondary_identifiers":["UMLS:C0152078","ICD9:625.5","MEDGEN:508874","DOID:9346","SCTID:39402007"],"synonyms":[{"name":"Taylor's syndrome","type":"exact"},{"name":"congestion-fibrosis syndrome","type":"exact"},{"name":"pelvic congestion syndrome","type":"exact"}],"termid":"MONDO:0004762","xrefs":{"Monarch":{"xref_id":"0004762"}}}


id: MONDO:0026768
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete warfarin sensitivity, X-linked (obsolete MONDO:0026768)","secondary_identifiers":["DOID:0080839","OMIM:301052"],"synonyms":[{"name":"Coumarin Sensitivity, X-Linked","type":"related"},{"name":"WARFARIN SENSITIVITY, X-LINKED","type":"related"},{"name":"Warfarin sensitivity","type":"exact"}],"termid":"MONDO:0026768","xrefs":{"Monarch":{"xref_id":"0026768"}}}


id: PBO:0048178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucose-6-phosphatase regulator","termid":"PBO:0048178"}


id: GO:1990930
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the oxidative demethylation of N1-methyladenosine RNA, with concomitant decarboxylation of 2-oxoglutarate and releases oxidized methyl group on N1-methyladenosine as formaldehyde.","definition_xrefs":["PMID:26863196","PMID:26863410"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidative RNA demethylase activity","termid":"GO:0035515"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140098"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0140098","GO:0016491"],"is_obsolete":false,"name":"mRNA N1-methyladenosine dioxygenase activity","secondary_identifiers":["EC:1.14.11.54","RHEA:49516"],"synonyms":[{"name":"RNA N(1)-methyladenosine dioxygenase activity","type":"related"},{"name":"RNA N1-methyladenosine dioxygenase activity","type":"related"}],"termid":"GO:1990930"}


id: MONDO:1012077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"faded shaker, non-human animal","termid":"MONDO:1011841"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"faded shaker, chicken","secondary_identifiers":["OMIA:000365-9031"],"termid":"MONDO:1012077","xrefs":{"Monarch":{"xref_id":"1012077"}}}


id: PBO:0061794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"odontogenic, ameloblast associated","termid":"PBO:0061794"}


id: MONDO:0018208
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurofibromatosis type 1","termid":"MONDO:0018975"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"neurofibromatosis type 1 due to NF1 mutation or intragenic deletion","secondary_identifiers":["UMLS:C5779636","Orphanet:363700","GARD:17570","MEDGEN:1842855"],"synonyms":[{"name":"Von Recklinghausen disease due to NF1 mutation or intragenic deletion","type":"exact"}],"termid":"MONDO:0018208","xrefs":{"Monarch":{"xref_id":"0018208"}}}


id: GO:1900944
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of isoprene metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of isoprenoid metabolic process","termid":"GO:0019747"},{"relation_name":"is_a","term_name":"regulation of olefin metabolic process","termid":"GO:1900908"},{"relation_name":"regulates","term_name":"isoprene metabolic process","termid":"GO:0043611"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of isoprene metabolic process","synonyms":[{"name":"regulation of 2-methyl-1,3-butadiene metabolic process","type":"exact"},{"name":"regulation of 2-methyl-1,3-butadiene metabolism","type":"exact"},{"name":"regulation of hemiterpene metabolic process","type":"exact"},{"name":"regulation of hemiterpene metabolism","type":"exact"},{"name":"regulation of isoprene metabolism","type":"exact"}],"termid":"GO:1900944"}


id: PBO:0079562
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin associated protein 1","termid":"PBO:0079562"}


id: PBO:0028915
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heavy_metal_stress","termid":"PBO:0028915"}


id: GO:0004253
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the cleavage of the Leu-Leu bond in synthetic tetradecapeptide renin substrate, producing angiotensin I, but not active on natural angiotensinogen. Also hydrolyzes BZ-Arg-para-nitroanilide.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete gamma-renin activity (obsolete GO:0004253)","synonyms":[{"name":"gamma-renin activity","type":"exact"}],"termid":"GO:0004253"}


id: MONDO:0031061
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"familial nephrotic syndrome","termid":"MONDO:0002350"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"nephrotic syndrome, IIa 26","secondary_identifiers":["UMLS:C5774221","MEDGEN:1823994","OMIM:620049"],"synonyms":[{"name":"NPHS26","type":"exact"},{"name":"nephrotic syndrome, IIa 26","type":"exact"}],"termid":"MONDO:0031061","xrefs":{"Monarch":{"xref_id":"0031061"}}}


id: FYPO:0005531
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to chromatin at the IRC1L boundary element is decreased.","definition_xrefs":["PMID:25972440","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000138","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"decreased protein localization to chromatin at boundary element IRC1L","synonyms":[{"name":"decreased protein localisation to chromatin at boundary element IRC1L","type":"exact"},{"name":"decreased protein localization to centromeric boundary element IRC1L","type":"exact"},{"name":"decreased protein localization to chromatin at boundary element IRC1L during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to chromatin at boundary element IRC1L during vegetative growth","type":"exact"},{"name":"reduced protein localization to chromatin at boundary element IRC1L","type":"exact"}],"termid":"FYPO:0005531"}


id: GO:0030082
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein-pigment complex that absorbs light at 800 and 850 nm; is peripherally associated to the bacterial reaction center; transfers excitation energy to the B875 antenna complex.","definition_xrefs":["GOC:kd","GOC:lr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"light-harvesting complex, peripheral complex","termid":"GO:0030079"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0032991","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"B800-850 antenna complex","synonyms":[{"name":"LH2 complex","type":"exact"},{"name":"light harvesting complex II","type":"exact"}],"termid":"GO:0030082"}


id: MOD:00189
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-serine residue to dehydroalanine.","definition_xrefs":["Unimod:23#S","OMSSA:140","RESID:AA0181#SER","PubMed:7947813","PubMed:2914619","PubMed:10220322","OMSSA:164","PubMed:1547888","PubMed:8239649","OMSSA:96","DeltaMass:0","PubMed:1815586"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphorylation of an hydroxyl amino acid with prompt loss of phosphate","termid":"MOD:00416"},{"relation_name":"is_a","term_name":"modified L-serine residue","termid":"MOD:00916"},{"relation_name":"is_a","term_name":"dehydroalanine","termid":"MOD:01168"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dehydroalanine (Ser)","synonyms":[{"name":"2,3-didehydroalanine","type":"exact"},{"name":"2-aminoacrylic acid","type":"exact"},{"name":"2-aminopropenoic acid","type":"exact"},{"name":"4-methylidene-imidazole-5-one (MIO) active site","type":"exact"},{"name":"Dehydrated","type":"related"},{"name":"Dha","type":"exact"},{"name":"Dha(Ser)","type":"exact"},{"name":"MOD_RES 2,3-didehydroalanine (Ser)","type":"exact"},{"name":"anhydroserine","type":"exact"},{"name":"beta-elim-s","type":"exact"},{"name":"dehydro","type":"exact"},{"name":"dehydroalanine","type":"exact"},{"name":"phospholosss","type":"exact"}],"termid":"MOD:00189"}


id: PBO:0001170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase regulatory subunit Glc9 (predicted)","termid":"PBO:0001170"}


id: PBO:0086720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein of unknown function; non-essential gene identified in a screen for mutants with decreased levels of rDNA transcription","termid":"PBO:0086720"}


id: FYPO:0001507
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of phosphatidylinositol measured in a cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular phosphorus level","termid":"FYPO:0001543"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal cellular phosphatidylinositol level","synonyms":[{"name":"normal cellular PI level","type":"exact"},{"name":"normal cellular phosphatidylinositol accumulation","type":"related"},{"name":"normal cellular phosphatidylinositol level during mitotic cell cycle","type":"related"},{"name":"normal cellular phosphatidylinositol level during vegetative growth","type":"exact"}],"termid":"FYPO:0001507"}


id: GO:0098630
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The clustering together of unicellular organisms in suspension form aggregates.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell aggregation","termid":"GO:0098743"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"aggregation of unicellular organisms","synonyms":[{"name":"aggregation of single cell organisms","type":"exact"}],"termid":"GO:0098630"}


id: PR:Q09893
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC24B11.05 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q09893"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C24B11.05 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC24B11.05","synonyms":[{"name":"Spom972h-SPAC24B11.05","type":"exact"}],"termid":"PR:Q09893"}


id: PBO:0064347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plexin B1","termid":"PBO:0064347"}


id: MONDO:0014370
data:
  {"annotated_genes":["SJAG_04902"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88412],"is_not":false,"summary":null,"term":"MONDO:0014370"}]},"cv_name":"mondo","definition":"Any non-syndromic pontocerebellar hypoplasia in which the cause of the disease is a mutation in the VPS53 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pontocerebellar hypoplasia","termid":"MONDO:0020135"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04902":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0020022"}],"interesting_parent_ids":["MONDO:0020022"],"is_obsolete":false,"name":"pontocerebellar hypoplasia type 2E","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615851","GARD:18348","DOID:0060271","MEDGEN:862925","UMLS:C4014488"],"synonyms":[{"name":"PCH2E","type":"related"},{"name":"VPS53 non-syndromic pontocerebellar hypoplasia","type":"exact"},{"name":"non-syndromic pontocerebellar hypoplasia caused by mutation in VPS53","type":"exact"},{"name":"pontocerebellar hypoplasia type 2E","type":"exact"},{"name":"pontocerebellar hypoplasia, type 2E","type":"related"}],"termid":"MONDO:0014370","terms_by_termid":{"MONDO:0014370":null},"xrefs":{"Monarch":{"xref_id":"0014370"}}}


id: MONDO:0005330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete angiosarcoma (obsolete MONDO:0005330)","termid":"MONDO:0005330","xrefs":{"Monarch":{"xref_id":"0005330"}}}


id: PBO:0061390
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleophosmin 1 pseudogene 50","termid":"PBO:0061390"}


id: MONDO:0011209
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progeroid facial appearance with hand anomalies","secondary_identifiers":["OMIM:602249","MEDGEN:356343","MESH:C566563","UMLS:C1865699"],"synonyms":[{"name":"progeroid facial appearance with hand anomalies","type":"exact"}],"termid":"MONDO:0011209","xrefs":{"Monarch":{"xref_id":"0011209"}}}


id: PBO:0078319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor delta joining 1","termid":"PBO:0078319"}


id: GO:0032143
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a double-stranded DNA region containing a single thymine insertion or a deletion that results in an unpaired thymine.","definition_xrefs":["GOC:mah","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"single base insertion or deletion binding","termid":"GO:0032138"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"single thymine insertion binding","termid":"GO:0032143"}


id: GO:0110164
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the cell cycle process in which the distance is lengthened between poles of the mitotic spindle during mitotic anaphase B (spindle phase three).","definition_xrefs":["GOC:vw","PMID:27697865"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle organization","termid":"GO:0110028"},{"relation_name":"is_a","term_name":"regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110162"},{"relation_name":"is_a","term_name":"positive regulation of mitotic spindle elongation","termid":"GO:1902846"},{"relation_name":"positively_regulates","term_name":"mitotic spindle elongation (spindle phase three)","termid":"GO:0061805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0000226"},{"rel_name":"regulates","termid":"GO:0000226"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0000070"},{"rel_name":"positively_regulates","termid":"GO:0007010"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007010"}],"interesting_parent_ids":["GO:0008150","GO:0000226","GO:0000070","GO:0007010","GO:0007049"],"is_obsolete":false,"name":"positive regulation of mitotic spindle elongation (spindle phase three)","termid":"GO:0110164"}


id: GO:0035574
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histone H4 by the removal of a methyl group from lysine at position 20 of the histone.","definition_xrefs":["GOC:sp","PMID:20622853"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4-K20 demethylation (obsolete GO:0035574)","termid":"GO:0035574"}


id: GO:0043802
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 L-glutamine + 2 ATP + 2 H2O + hydrogenobyrinate = 2 L-glutamate + 2 ADP + 4 H+ + hydrogenobyrinate a,c-diamide + 2 phosphate.","definition_xrefs":["EC:6.3.5.9","RHEA:12544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbon-nitrogen ligase activity, with glutamine as amido-N-donor","termid":"GO:0016884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016874"],"is_obsolete":false,"name":"hydrogenobyrinic acid a,c-diamide synthase (glutamine-hydrolysing) activity","secondary_identifiers":["KEGG_REACTION:R05224","MetaCyc:R341-RXN"],"synonyms":[{"name":"CobB","type":"related"},{"name":"hydrogenobyrinic acid a,c diamide synthase (glutamine-hydrolysing) activity","type":"exact"},{"name":"hydrogenobyrinic-acid:L-glutamine amido-ligase (AMP-forming)","type":"exact"}],"termid":"GO:0043802"}


id: PATO:0001394
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A ploidy quality inhering in a bearer by virtue of the bearer's having two copies (homologs) of each chromosome, usually one from the mother and one from the father.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Diploid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"euploid","termid":"PATO:0001393"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diploid","termid":"PATO:0001394"}


id: FYPO:0005941
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which meiotic DNA double-strand break clipping is normal (i.e. indistinguishable from wild type). Meiotic DNA double-strand break clipping is the process by which SPO11/Rec12-oligonucleotide complexes are removed from 5' DNA double-strand breaks induced during meiosis.","definition_xrefs":["PomBase:mah","GO:1990898"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiotic cell cycle process","termid":"FYPO:0007078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000257"],"is_obsolete":false,"name":"normal meiotic DNA double-strand break clipping","termid":"FYPO:0005941"}


id: FYPO:0000991
data:
  {"alleles_by_uniquename":{"SJAG_03689:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03689","name":"dcr1delta","uniquename":"SJAG_03689:allele-1"},"SJAG_04697:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04697","name":"gms1delta","uniquename":"SJAG_04697:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121508],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0004205"},{"annotations":[121390],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0003727"}]},"cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of a specific substance measured in a cell is lower than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular physical quality phenotype","termid":"FYPO:0000136"},{"relation_name":"is_a","term_name":"altered level of substance in cell","termid":"FYPO:0000989"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03689":null,"SJAG_04697":null},"genotype_count":2,"genotypes_by_uniquename":{"dcr1delta":{"display_name":"dcr1delta","display_uniquename":"dcr1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03689:allele-1","expression":"Null"}]}]},"gms1delta":{"display_name":"gms1delta","display_uniquename":"gms1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04697:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"decreased level of substance in cell","references_by_uniquename":{"PMID:35226668":null,"PMID:36058798":null},"single_locus_annotated_genes":["SJAG_04697","SJAG_03689"],"single_locus_genotype_uniquenames":["dcr1delta","gms1delta"],"synonyms":[{"name":"reduced level of substance in cell","type":"exact"}],"termid":"FYPO:0000991","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000162":null,"FYPO:0003727":null,"FYPO:0004205":null,"FYPO_EXT:0000001":null}}


id: GO:0052038
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a symbiont alters or subverts the directed movement of substances within the cell of the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host cellular process","termid":"GO:0044068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont-mediated perturbation of host intracellular transport","synonyms":[{"name":"modulation by symbiont of host intracellular transport","type":"broad"},{"name":"modulation of host intracellular trafficking","type":"exact"}],"termid":"GO:0052038"}


id: PBO:0043460
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CCR4-NOT transcription complex subunit 1","termid":"PBO:0043460"}


id: PBO:0027752
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_localization_to_nucleus","termid":"PBO:0027752"}


id: MONDO:0007763
data:
  {"annotated_genes":["SJAG_02231","SJAG_00440","SJAG_03787"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88766,88767,88768],"is_not":false,"summary":null,"term":"MONDO:0007763"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"renal cell carcinoma","termid":"MONDO:0005086"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00440":null,"SJAG_02231":null,"SJAG_03787":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"nonpapillary renal cell carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:144700","DOID:0050387"],"synonyms":[{"name":"CCRCC","type":"narrow"},{"name":"RCC","type":"related"},{"name":"adenocarcinoma of kidney","type":"related"},{"name":"clear cell renal cell adenocarcinoma","type":"narrow"},{"name":"clear cell renal cell carcinoma","type":"narrow"},{"name":"hypernephroma","type":"related"},{"name":"nonpapillary renal carcinoma 1 locus","type":"related"},{"name":"renal carcinoma, chromophobe, somatic","type":"exact"},{"name":"renal cell carcinoma","type":"broad"},{"name":"renal cell carcinoma, clear cell","type":"exact"},{"name":"renal cell carcinoma, clear cell, somatic","type":"exact"},{"name":"renal cell carcinoma, nonpapillary","type":"related"},{"name":"renal cell carcinoma, somatic","type":"exact"}],"termid":"MONDO:0007763","terms_by_termid":{"MONDO:0007763":null},"xrefs":{"Monarch":{"xref_id":"0007763"}}}


id: GO:0039517
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which a virus effects a change in host protein serine/threonine phosphatase activity.","definition_xrefs":["GOC:bf","GOC:sp"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by virus of host protein serine/threonine phosphatase activity (obsolete GO:0039517)","synonyms":[{"name":"modulation by virus of protein serine/threonine phosphatase activity in host","type":"exact"},{"name":"regulation by virus of host protein serine/threonine phosphatase activity","type":"exact"}],"termid":"GO:0039517"}


id: PBO:0087480
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of chromatin assembly factor I (CAF-1), with Rlf2p and Msi1p; chromatin assembly by CAF-1 is important for multiple processes including silencing at telomeres, mating type loci, and rDNA; maintenance of kinetochore structure, deactivation of the DNA damage checkpoint after DNA repair, chromatin dynamics during transcription; and repression of divergent transcription; relocalizes to the cytosol in response to hypoxia","termid":"PBO:0087480"}


id: FYPO:0007516
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which DNA occupies a smaller portion of the total nuclear volume than normal. The nuclear volume itself may be normal.","definition_xrefs":["PMID:33153481","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal subcellular component during vegetative growth","termid":"FYPO:0001322"},{"relation_name":"is_a","term_name":"abnormal nucleus","termid":"FYPO:0002403"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002403"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002","FYPO:0002403"],"is_obsolete":false,"name":"decreased DNA volume","synonyms":[{"name":"decreased DNA volume during mitotic cell cycle","type":"related"},{"name":"decreased DNA volume during vegetative growth","type":"exact"},{"name":"reduced DNA volume","type":"exact"}],"termid":"FYPO:0007516"}


id: PBO:0085305
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Phosphatase and transcription/RNA-processing factor; associates with TFIIB and cleavage/polyadenylation factor Pta1p; exhibits phosphatase activity on serine-5 and serine-7 of the RNA polymerase II C-terminal domain; affects start site selection and transcriptional read through in vivo","termid":"PBO:0085305"}


id: PBO:0065629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 7","termid":"PBO:0065629"}


id: MONDO:1011242
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Microphthalmia that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microphthalmia, non-human animal","termid":"MONDO:1010324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microphthalmia, sheep","secondary_identifiers":["OMIA:000649-9940"],"termid":"MONDO:1011242","xrefs":{"Monarch":{"xref_id":"1011242"}}}


id: PBO:0075977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal transducer and activator of transcription 3","termid":"PBO:0075977"}


id: PBO:0027257
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_phosphorylation_during_mitosis","termid":"PBO:0027257"}


id: GO:0031379
data:
  {"annotated_genes":["SJAG_03356","SJAG_03193","SJAG_02725"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[72086,73871,120043],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031380"}]},"cv_name":"cellular_component","definition":"A protein complex that possesses RNA-directed RNA polymerase activity.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase complex","termid":"GO:0030880"}],"gene_count":3,"genes_by_uniquename":{"SJAG_02725":null,"SJAG_03193":null,"SJAG_03356":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"RNA-directed RNA polymerase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031379","terms_by_termid":{"GO:0031380":null}}


id: GO:0031903
data:
  {"annotated_genes":["SJAG_02693","SJAG_00891","SJAG_03440","SJAG_03464","SJAG_02997","SJAG_03781","SJAG_01685","SJAG_02619","SJAG_00947","SJAG_04315","SJAG_03715","SJAG_03324","SJAG_04763","SJAG_01165","SJAG_03493","SJAG_00702","SJAG_05950","SJAG_04428","SJAG_04146"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[59595,98965,117359,100583,75661,82294,80436,117822,81605,120246,92433,108721,77826,75269,79708,80070,73693,72634,77470],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005778"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding a microbody.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microbody","termid":"GO:0042579"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"microbody","termid":"GO:0042579"}],"gene_count":19,"genes_by_uniquename":{"SJAG_00702":null,"SJAG_00891":null,"SJAG_00947":null,"SJAG_01165":null,"SJAG_01685":null,"SJAG_02619":null,"SJAG_02693":null,"SJAG_02997":null,"SJAG_03324":null,"SJAG_03440":null,"SJAG_03464":null,"SJAG_03493":null,"SJAG_03715":null,"SJAG_03781":null,"SJAG_04146":null,"SJAG_04315":null,"SJAG_04428":null,"SJAG_04763":null,"SJAG_05950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"microbody membrane","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0031903","terms_by_termid":{"GO:0005778":null}}


id: MONDO:0014805
data:
  {"annotated_genes":["SJAG_03686","SJAG_00573"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87781,87780],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958071"}]},"cv_name":"mondo","definition":"A rare genetic intellectual disability syndrome characterized by global developmental delay, intellectual disability, severe speech delay, behavioral abnormalities (including impulsivity, compulsivity, stubbornness, manipulative behaviors, temper tantrums, and aggressive behaviors), autism spectrum disorder and mild and variable dysmorphic facies (including deep-set eyes and a prominent nasal septum, extending below the alae nasi) due to point mutation of USP7 gene or 16p13.2 microdeletion where USP7 is completely or partially deleted. Behavioral abnormalities are more pronounced in microdeletion. Patients may also have hypotonia, feeding problems, delayed walking with unsteady gait, hypogonadism in males, seizures and ocular anomalies (such as myopia, estropia, strabismus, and nystagmus).","definition_xrefs":["Orphanet:643549"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00573":null,"SJAG_03686":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Hao-Fountain syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1719035","NORD:1917","UMLS:C5393908"],"synonyms":[{"name":"HAFOUS","type":"exact"},{"name":"USP7-Related Diseases","type":"exact"}],"termid":"MONDO:0014805","terms_by_termid":{"MONDO:0958071":null},"xrefs":{"Monarch":{"xref_id":"0014805"}}}


id: PBO:0080788
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XRCC1 N-terminal domain containing 1, C-terminal like pseudogene","termid":"PBO:0080788"}


id: PBO:0004204
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione peroxidase Gpx1","termid":"PBO:0004204"}


id: PBO:0063007
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAFAH1B2 pseudogene 1","termid":"PBO:0063007"}


id: GO:0046454
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving dimethylsilanediol, the smallest member of the dialkylsilanediols. Dimethylsilanediol is the monomer of polydimethylsiloxane, a compound which can be found in a wide range of industrial and consumer products.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"small molecule metabolic process","termid":"GO:0044281"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dimethylsilanediol metabolic process","synonyms":[{"name":"dimethylsilanediol metabolism","type":"exact"}],"termid":"GO:0046454"}


id: PATO:0002258
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A shape quality inhering in a bearer by virtue of the bearer's having a point.","definition_xrefs":["PATOC:http://www.merriam-webster.com/dictionary/pointed"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sharp","termid":"PATO:0001419"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pointed","termid":"PATO:0002258"}


id: SOFP:orf_classification
data:
  {"annotation_feature_type":"gene","cv_name":"feature_property","definition":"gene call confidence flag","direct_ancestors":[{"relation_name":"is_a","term_name":"feature_property","termid":"SOFP:feature_property"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"orf_classification","termid":"SOFP:orf_classification"}


id: PBO:0041246
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 1 open reading frame 131","termid":"PBO:0041246"}


id: PBO:0040261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autophagy related 14","termid":"PBO:0040261"}


id: GO:0051069
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving galactomannan, a polysaccharide composed of D-galactose and D-mannose. The mannose units form the backbone structure (a linear main chain) with the D-galactose as single side units.","definition_xrefs":["PMID:30701316","PMID:33012173"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substituted mannan metabolic process","termid":"GO:0006080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"galactomannan metabolic process","synonyms":[{"name":"galactomannan metabolism","type":"exact"}],"termid":"GO:0051069"}


id: GO:0052765
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2 reduced coenzyme F420-(gamma-L-Glu)(n) + O2 = 2 oxidized coenzyme F420-(gamma-L-Glu)(n) + 2 H2O + 2 H+.","definition_xrefs":["PMID:15340796","RHEA:39711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, oxygen as acceptor","termid":"GO:0016647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"coenzyme F420H2 oxidase activity","secondary_identifiers":["EC:1.5.3.22"],"synonyms":[{"name":"F420H2 oxidase activity","type":"exact"},{"name":"F420H2:oxygen oxidoreductase activity","type":"exact"},{"name":"reduced coenzyme F420 oxidase activity","type":"exact"}],"termid":"GO:0052765"}


id: MONDO:0044101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An abnormal pregnancy in which the conception is implanted and develops in the cornu of uterus.","definition_xrefs":["NCIT:C92761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ectopic pregnancy","termid":"MONDO:0000755"},{"relation_name":"is_a","term_name":"uterine disorder","termid":"MONDO:0002654"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy, cornual","secondary_identifiers":["MEDGEN:452359","MESH:D065173","UMLS:C0269286","SCTID:87605005"],"synonyms":[{"name":"Pregnancies, cornual","type":"related"},{"name":"cornual Pregnancies","type":"related"},{"name":"cornual pregnancy","type":"exact"},{"name":"ectopic pregnancy of uterine horn","type":"exact"},{"name":"rudimentary horn pregnancy","type":"related"},{"name":"uterine horn ectopic pregnancy","type":"exact"}],"termid":"MONDO:0044101","xrefs":{"Monarch":{"xref_id":"0044101"}}}


id: PBO:0030031
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_adenylyl_cyclase_activity","termid":"PBO:0030031"}


id: PBO:0017871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"iron/zinc ion transmembrane transporter (predicted)","termid":"PBO:0017871"}


id: MONDO:0017217
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Visceral calciphylaxis is a rare, life-threatening, non-inflammatory vasculopathy disorder characterized by diffuse precipitation of calcium in viscera (mainly in the heart or lungs, but also in the stomach or kidneys) leading to fibrosis and thrombosis, which eventually cause necrotic ulcerations of the tissue. Patients may present with dyspnea, cough and respiratory failure or acute heart block and subsequent sudden cardiac death, depending on the affected organ. The disease mainly affects patients on dialysis or patients having undergone renal transplantation.","definition_xrefs":["Orphanet:280068"],"direct_ancestors":[{"relation_name":"is_a","term_name":"calciphylaxis","termid":"MONDO:0017215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"visceral calciphylaxis","secondary_identifiers":["MEDGEN:1664968","UMLS:C4749793","GARD:21071"],"termid":"MONDO:0017217","xrefs":{"Monarch":{"xref_id":"0017217"}}}


id: PR:O42953
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC19G7.04 gene.","definition_xrefs":["UniProtKB:O42953","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HMG box-containing protein C19G7.04 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC19G7.04","synonyms":[{"name":"Spom972h-SPBC19G7.04","type":"exact"}],"termid":"PR:O42953"}


id: PBO:0004116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfide-quinone oxidoreductase","termid":"PBO:0004116"}


id: PBO:0066399
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regenerating family member 1 gamma, pseudogene","termid":"PBO:0066399"}


id: PBO:0109132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CRIPTO pseudogene 5","termid":"PBO:0109132"}


id: GO:1905800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of intraciliary retrograde transport.","definition_xrefs":["PMID:27930654","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of intracellular transport","termid":"GO:0032387"},{"relation_name":"is_a","term_name":"regulation of intraciliary retrograde transport","termid":"GO:1905799"},{"relation_name":"negatively_regulates","term_name":"intraciliary retrograde transport","termid":"GO:0035721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"negative regulation of intraciliary retrograde transport","synonyms":[{"name":"down regulation of intraciliary retrograde transport","type":"exact"},{"name":"down regulation of intraflagellar retrograde transport","type":"exact"},{"name":"down-regulation of intraciliary retrograde transport","type":"exact"},{"name":"down-regulation of intraflagellar retrograde transport","type":"exact"},{"name":"downregulation of intraciliary retrograde transport","type":"exact"},{"name":"downregulation of intraflagellar retrograde transport","type":"exact"},{"name":"inhibition of intraciliary retrograde transport","type":"narrow"},{"name":"inhibition of intraflagellar retrograde transport","type":"narrow"},{"name":"negative regulation of intraflagellar retrograde transport","type":"exact"}],"termid":"GO:1905800"}


id: PBO:0062330
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 6 subfamily C member 69 pseudogene","termid":"PBO:0062330"}


id: PBO:0031414
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitotic_G2/M_transition_delay","termid":"PBO:0031414"}


id: PBO:0040067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP regulated phosphoprotein 21","termid":"PBO:0040067"}


id: PBO:0074886
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 63B","termid":"PBO:0074886"}


id: PBO:0027989
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_abnormal_septum_morphology","termid":"PBO:0027989"}


id: GO:0034812
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 9,10-dihydroxybenzo(a)pyrene + O2 = cis-4-(8-hydroxypyren-7-yl)-2-oxobut-3-enoate.","definition_xrefs":["UM-BBD_reactionID:r1134"],"gene_count":0,"genotype_count":0,"name":"obsolete 9,10-dihydroxybenzo(a)pyrene dioxygenase activity (obsolete GO:0034812)","termid":"GO:0034812"}


id: PBO:0029567
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_septum_site_selection","termid":"PBO:0029567"}


id: GO:0032451
data:
  {"annotated_genes":["SJAG_03750","SJAG_03286","SJAG_02401","SJAG_00892","SJAG_03664","SJAG_03635","SJAG_03997","SJAG_03041"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[89395,72380],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051864"},{"annotations":[68502],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140680"},{"annotations":[72077,76903],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034647"},{"annotations":[72377,119823],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032454"},{"annotations":[61535,96095],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140683"},{"annotations":[90488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008398"},{"annotations":[105117],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990984"}]},"cv_name":"molecular_function","definition":"Catalysis of the removal of a methyl group from a substrate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"catalytic activity","termid":"GO:0003824"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00892":null,"SJAG_02401":null,"SJAG_03041":null,"SJAG_03286":null,"SJAG_03635":null,"SJAG_03664":null,"SJAG_03750":null,"SJAG_03997":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674"],"is_obsolete":false,"name":"demethylase activity","references_by_uniquename":{"GO_REF:0000003":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0032451","terms_by_termid":{"GO:0008398":null,"GO:0032454":null,"GO:0034647":null,"GO:0051864":null,"GO:0140680":null,"GO:0140683":null,"GO:1990984":null}}


id: GO:0031706
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a subtype 3 bombesin receptor.","definition_xrefs":["GOC:nln","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bombesin receptor binding","termid":"GO:0031705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0005515","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"subtype 3 bombesin receptor binding","synonyms":[{"name":"subtype 3 bombesin receptor ligand","type":"narrow"}],"termid":"GO:0031706"}


id: MONDO:1010268
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Renal dysplasia that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"disorder of development or morphogenesis, non-human animal","termid":"MONDO:1011313"},{"relation_name":"is_a","term_name":"renal disease, non-human animal","termid":"MONDO:1011909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"renal dysplasia, non-human animal","secondary_identifiers":["OMIA:001135"],"termid":"MONDO:1010268","xrefs":{"Monarch":{"xref_id":"1010268"}}}


id: SO:0001663
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A core RNA polymerase II promoter element with consensus (G/A)T(T/G/A)(T/A)(G/T)(T/G)(T/G).","definition_xrefs":["PMID:16858867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"core_eukaryotic_promoter_element","termid":"SO:0001660"},{"relation_name":"part_of","term_name":"RNApol_II_core_promoter","termid":"SO:0001669"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BREd_motif","synonyms":[{"name":"BREd","type":"exact"},{"name":"BREd motif","type":"related"}],"termid":"SO:0001663"}


id: GO:0006099
data:
  {"annotated_genes":["SJAG_01630","SJAG_06382","SJAG_01671","SJAG_01895","SJAG_04843","SJAG_01922","SJAG_03163","SJAG_02464","SJAG_03588","SJAG_01753","SJAG_01524","SJAG_03920","SJAG_00260","SJAG_02398","SJAG_03813"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62425,63744,65703,67991,72185,72697,73711,75106,76057,76364,77285,77781,78760,81229,108769],"is_not":false,"summary":null,"term":"GO:0006099"}]},"cv_name":"biological_process","definition":"A nearly universal metabolic pathway in which the acetyl group of acetyl coenzyme A is effectively oxidized to two CO2 and four pairs of electrons are transferred to coenzymes. The acetyl group combines with oxaloacetate to form citrate, which undergoes successive transformations to isocitrate, 2-oxoglutarate, succinyl-CoA, succinate, fumarate, malate, and oxaloacetate again, thus completing the cycle. In eukaryotes the tricarboxylic acid is confined to the mitochondria. See also glyoxylate cycle.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary metabolic process","termid":"GO:0044238"},{"relation_name":"part_of","term_name":"aerobic respiration","termid":"GO:0009060"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00260":null,"SJAG_01524":null,"SJAG_01630":null,"SJAG_01671":null,"SJAG_01753":null,"SJAG_01895":null,"SJAG_01922":null,"SJAG_02398":null,"SJAG_02464":null,"SJAG_03163":null,"SJAG_03588":null,"SJAG_03813":null,"SJAG_03920":null,"SJAG_04843":null,"SJAG_06382":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006091"}],"interesting_parent_ids":["GO:0006091","GO:0008150"],"is_obsolete":false,"name":"tricarboxylic acid cycle","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-71403","Wikipedia:Tricarboxylic_acid_cycle"],"synonyms":[{"name":"Krebs cycle","type":"exact"},{"name":"TCA cycle","type":"exact"},{"name":"citric acid cycle","type":"exact"},{"name":"oxidative TCA cycle","type":"exact"}],"termid":"GO:0006099","terms_by_termid":{"GO:0006099":null}}


id: GO:0016888
data:
  {"annotated_genes":["SJAG_03994","SJAG_01648","SJAG_05237","SJAG_01173","SJAG_01832","SJAG_04183"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[80410,74723,73229,76513,77545,67994],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017108"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of ester linkages within deoxyribonucleic acids by creating internal breaks to yield 5'-phosphomonoesters.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA endonuclease activity","termid":"GO:0004520"},{"relation_name":"is_a","term_name":"hydrolase activity, acting on ester bonds","termid":"GO:0016788"}],"gene_count":6,"genes_by_uniquename":{"SJAG_01173":null,"SJAG_01648":null,"SJAG_01832":null,"SJAG_03994":null,"SJAG_04183":null,"SJAG_05237":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140097"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016787","GO:0140097","GO:0016788","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"DNA endonuclease activity, producing 5'-phosphomonoesters","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null},"secondary_identifiers":["EC:3.1.21.-","Reactome:R-HSA-912368"],"synonyms":[{"name":"endodeoxyribonuclease activity, producing 5' phosphomonoesters","type":"exact"},{"name":"endodeoxyribonuclease activity, producing 5'-phosphomonoesters","type":"exact"}],"termid":"GO:0016888","terms_by_termid":{"GO:0017108":null}}


id: PBO:0065534
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"papillary thyroid carcinoma susceptibility candidate 1","termid":"PBO:0065534"}


id: PBO:0026709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_MCM_complex_binding","termid":"PBO:0026709"}


id: GO:0002609
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of myeloid dendritic cell antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of dendritic cell antigen processing and presentation","termid":"GO:0002606"},{"relation_name":"is_a","term_name":"regulation of myeloid dendritic cell antigen processing and presentation","termid":"GO:0002607"},{"relation_name":"positively_regulates","term_name":"myeloid dendritic cell antigen processing and presentation","termid":"GO:0002469"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of myeloid dendritic cell antigen processing and presentation","synonyms":[{"name":"activation of myeloid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"stimulation of myeloid dendritic cell antigen processing and presentation","type":"narrow"},{"name":"up regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"up-regulation of myeloid dendritic cell antigen processing and presentation","type":"exact"},{"name":"upregulation of myeloid dendritic cell antigen processing and presentation","type":"exact"}],"termid":"GO:0002609"}


id: GO:0018734
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: butyrolactone + H2O = 4-hydroxybutanoate.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete butyrolactone hydrolase activity (obsolete GO:0018734)","termid":"GO:0018734"}


id: GO:2000436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein neddylation.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein modification by small protein conjugation or removal","termid":"GO:1903322"},{"relation_name":"is_a","term_name":"regulation of protein neddylation","termid":"GO:2000434"},{"relation_name":"positively_regulates","term_name":"protein neddylation","termid":"GO:0045116"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0070647"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0070647","GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein neddylation","synonyms":[{"name":"positive regulation of RUB1-protein conjugation","type":"exact"}],"termid":"GO:2000436"}


id: GO:0061061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of a muscle structure over time, from its formation to its mature state. Muscle structures are contractile cells, tissues or organs that are found in multicellular organisms.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure development","termid":"GO:0048856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"muscle structure development","termid":"GO:0061061"}


id: PBO:0079824
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unc-51 like kinase 3","termid":"PBO:0079824"}


id: PBO:0090829
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha/beta hydrolase fold","termid":"PBO:0090829"}


id: MONDO:0032576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0032576 (obsolete MONDO:0032576)","termid":"MONDO:0032576","xrefs":{"Monarch":{"xref_id":"0032576"}}}


id: PBO:0041520
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C16orf46 divergent transcript","termid":"PBO:0041520"}


id: GO:0046525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-galactose + O-beta-D-xylosylprotein = UDP + 4-beta-D-galactosyl-O-beta-D-xylosylprotein.","definition_xrefs":["EC:2.4.1.133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UDP-galactosyltransferase activity","termid":"GO:0035250"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016757","GO:0140096"],"is_obsolete":false,"name":"xylosylprotein 4-beta-galactosyltransferase activity","secondary_identifiers":["MetaCyc:2.4.1.133-RXN","Reactome:R-HSA-1889981","Reactome:R-HSA-3560804","RHEA:15297"],"synonyms":[{"name":"UDP-D-galactose:D-xylose galactosyltransferase activity","type":"related"},{"name":"UDP-D-galactose:xylose galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:O-beta-D-xylosylprotein 4-beta-D-galactosyltransferase activity","type":"related"},{"name":"UDP-galactose:xylose galactosyltransferase activity","type":"exact"},{"name":"UDPgalactose:O-beta-D-xylosylprotein 4-beta-D-galactosyltransferase activity","type":"related"},{"name":"galactosyltransferase I activity","type":"related"},{"name":"uridine diphosphogalactose-xylose galactosyltransferase activity","type":"related"}],"termid":"GO:0046525"}


id: PBO:0006198
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-requires_modification","termid":"PBO:0006198"}


id: PBO:0080691
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WNK lysine deficient protein kinase 3","termid":"PBO:0080691"}


id: GO:0060899
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a neurectodermal cell to a specialized neurectodermal cell that will give rise to the optic vesicle.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in eye field cell fate commitment of camera-type eye (obsolete GO:0060899)","termid":"GO:0060899"}


id: GO:0055090
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process involved in the maintenance of an internal steady state of acylglycerol within an organism or cell.","definition_xrefs":["GOC:BHF","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid homeostasis","termid":"GO:0055088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"acylglycerol homeostasis","synonyms":[{"name":"glyceride homeostasis","type":"exact"}],"termid":"GO:0055090"}


id: PBO:0083922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Formylkynurenine formamidase; involved in the de novo biosynthesis of NAD from tryptophan via kynurenine","termid":"PBO:0083922"}


id: PBO:0117463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, iron ion Mrs4","termid":"PBO:0117463"}


id: PBO:0025539
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid metabolism disorder","termid":"PBO:0025539"}


id: PR:Q9HDZ0
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A thiomorpholine-carboxylate dehydrogenase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO00761","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein P11E10.01 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAP11E10.01","secondary_identifiers":["UniProtKB:Q9HDZ0"],"synonyms":[{"name":"Spom972h-CRYM","type":"exact"}],"termid":"PR:Q9HDZ0"}


id: MONDO:0011969
data:
  {"annotated_genes":["SJAG_01950"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87038],"is_not":false,"summary":null,"term":"MONDO:0011969"}]},"cv_name":"mondo","definition":"A form of congenital disorders of N-linked glycosylation that is characterized by gastrointestinal symptoms (diarrhea, vomiting, feeding problems with failure to thrive, protein-losing enteropathy), edema and ascites (including hydrops fetalis), hepatomegaly, renal tubulopathy, coagulation anomalies due to thrombocytopenia, brain involvement (psychomotor delay, seizures, ataxia), facial dysmorphism (low-set ears and retrognathia), pes equinovarus, and muscular hypotonia. Cataracts may also be observed. Prognosis is usually poor. The disease is caused by loss-of-function mutations in the gene ALG8 (11q14.1), resulting in a block in the initial step of protein glycosylation.","definition_xrefs":["Orphanet:79325"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete nephropathy secondary to a storage or other metabolic disease (obsolete MONDO:0019743)","termid":"MONDO:0019743"},{"relation_name":"is_a","term_name":"congenital disorder of glycosylation type I","termid":"MONDO:0005500"},{"relation_name":"is_a","term_name":"disorder of protein N-glycosylation","termid":"MONDO:0017740"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01950":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0024322"}],"interesting_parent_ids":["MONDO:0024322","MONDO:0005066"],"is_obsolete":false,"name":"ALG8-congenital disorder of glycosylation","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C2931002","MESH:C535746","SCTID:720977000","GARD:9834","DOID:0080560","OMIM:608104","MEDGEN:419692"],"synonyms":[{"name":"ALG8-CDG","type":"exact"},{"name":"ALG8-CDG (CDG-Ih)","type":"related"},{"name":"ALG8-congenital disorder of glycosylation","type":"exact"},{"name":"CDG 1H","type":"related"},{"name":"CDG Ih","type":"related"},{"name":"CDG syndrome type Ih","type":"exact"},{"name":"CDG-Ih","type":"exact"},{"name":"CDG1H","type":"exact"},{"name":"carbohydrate deficient glycoprotein syndrome type Ih","type":"exact"},{"name":"congenital disorder of glycosylation type 1h","type":"exact"},{"name":"congenital disorder of glycosylation type Ih","type":"exact"},{"name":"congenital disorder of glycosylation, type Ih","type":"related"},{"name":"glucosyltransferase 2 deficiency","type":"exact"}],"termid":"MONDO:0011969","terms_by_termid":{"MONDO:0011969":null},"xrefs":{"Monarch":{"xref_id":"0011969"}}}


id: PBO:0087199
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Saccharopine dehydrogenase (NAD+, L-lysine-forming); catalyzes the conversion of saccharopine to L-lysine, which is the final step in the lysine biosynthesis pathway; also has mRNA binding activity","termid":"PBO:0087199"}


id: PBO:0044411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome P450 family 2 subfamily G member 2, pseudogene","termid":"PBO:0044411"}


id: PBO:0002678
data:
  {"annotated_genes":["SJAG_MIT03"],"annotation_feature_type":"gene","cv_annotations":{"EC numbers":[{"annotations":[56599],"is_not":false,"summary":null,"term":"PBO:0002678"}]},"cv_name":"EC numbers","gene_count":1,"genes_by_uniquename":{"SJAG_MIT03":null},"genotype_count":0,"is_obsolete":false,"name":"1.10.2.2","termid":"PBO:0002678","terms_by_termid":{"PBO:0002678":null}}


id: GO:1902365
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of protein localization to spindle pole body.","definition_xrefs":["GOC:TermGenie","PMID:21131906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to spindle pole body","termid":"GO:1902363"},{"relation_name":"is_a","term_name":"positive regulation of protein localization","termid":"GO:1903829"},{"relation_name":"positively_regulates","term_name":"protein localization to spindle pole body","termid":"GO:0071988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of protein localization to spindle pole body","synonyms":[{"name":"activation of protein localisation to spindle pole body","type":"narrow"},{"name":"activation of protein localization to spindle pole body","type":"narrow"},{"name":"positive regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up regulation of protein localization to spindle pole body","type":"exact"},{"name":"up-regulation of protein localisation to spindle pole body","type":"exact"},{"name":"up-regulation of protein localization to spindle pole body","type":"exact"},{"name":"upregulation of protein localisation to spindle pole body","type":"exact"},{"name":"upregulation of protein localization to spindle pole body","type":"exact"}],"termid":"GO:1902365"}


id: PBO:0061035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NIP7 pseudogene 1","termid":"PBO:0061035"}


id: PATO:0001144
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001144 ig g concentration value (obsolete PATO:0001144)","termid":"PATO:0001144"}


id: GO:1904508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of protein localization to basolateral plasma membrane.","definition_xrefs":["GOC:TermGenie","GOC:kmv","GO_REF:0000058","PMID:26115433"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein localization to cell periphery","termid":"GO:1904375"},{"relation_name":"is_a","term_name":"regulation of protein localization to membrane","termid":"GO:1905475"},{"relation_name":"regulates","term_name":"protein localization to basolateral plasma membrane","termid":"GO:1903361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of protein localization to basolateral plasma membrane","synonyms":[{"name":"regulation of protein localisation in basolateral plasma membrane","type":"exact"},{"name":"regulation of protein localisation to basolateral plasma membrane","type":"exact"},{"name":"regulation of protein localization in basolateral plasma membrane","type":"exact"}],"termid":"GO:1904508"}


id: PBO:0003404
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"20S proteasome component alpha 1 (predicted)","termid":"PBO:0003404"}


id: PATO:0000162
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000162 absolute rate (obsolete PATO:0000162)","termid":"PATO:0000162"}


id: GO:0047114
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 7,8-dihydro-7,8-dihydroxykynurenate + NAD+ = 7,8-dihydroxykynurenate + H+ + NADH.","definition_xrefs":["EC:1.3.1.18","RHEA:22248"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"kynurenate-7,8-dihydrodiol dehydrogenase activity","secondary_identifiers":["MetaCyc:1.3.1.18-RXN","KEGG_REACTION:R03251"],"synonyms":[{"name":"7,8-dihydro-7,8-dihydroxykynurenate dehydrogenase activity","type":"related"},{"name":"7,8-dihydro-7,8-dihydroxykynurenate:NAD+ oxidoreductase activity","type":"related"},{"name":"7,8-dihydroxykynurenic acid 7,8-diol dehydrogenase activity","type":"related"}],"termid":"GO:0047114"}


id: MONDO:0011374
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive condition caused by mutation(s) in the LDLRAP1 gene, encoding low density lipoprotein receptor adaptor protein 1. The phenotype is similar to that of familial hypercholesterolemia, but generally considered to be a milder form of hypercholesterolemia.","definition_xrefs":["NCIT:C128114"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"homozygous familial hypercholesterolemia","termid":"MONDO:0018328"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"},{"relation_name":"is_a","term_name":"hyperlipoproteinemia","termid":"MONDO:0037748"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0005066"],"is_obsolete":false,"name":"hypercholesterolemia, familial, 4","secondary_identifiers":["DOID:0090105","GARD:18614","MESH:C566331","MEDGEN:400313","OMIM:603813","UMLS:C1863512"],"synonyms":[{"name":"ARH","type":"exact"},{"name":"ARH1","type":"narrow"},{"name":"ARH2","type":"narrow"},{"name":"FHCB1","type":"related"},{"name":"FHCB1, formerly","type":"related"},{"name":"FHCB2","type":"related"},{"name":"FHCB2, formerly","type":"related"},{"name":"autosomal recessive hypercholesterolemia 1","type":"narrow"},{"name":"autosomal recessive hypercholesterolemia 2","type":"narrow"},{"name":"familial autosomal recessive hypercholesterolemia","type":"exact"},{"name":"hypercholesterolemia, autosomal recessive","type":"related"},{"name":"hypercholesterolemia, autosomal recessive, 1","type":"related"},{"name":"hypercholesterolemia, autosomal recessive, 1, formerly","type":"related"},{"name":"hypercholesterolemia, autosomal recessive, 2","type":"related"},{"name":"hypercholesterolemia, autosomal recessive, 2, formerly","type":"related"}],"termid":"MONDO:0011374","xrefs":{"Monarch":{"xref_id":"0011374"}}}


id: GO:0005928
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. A cell-substrate adherens junction found in the apical region of a cell, such as those found in cuticle-secreting epithelia, which connect the apical membrane to the cuticle.","definition_xrefs":["GOC:mah","PMID:11700298"],"gene_count":0,"genotype_count":0,"name":"obsolete apical hemi-adherens junction (obsolete GO:0005928)","synonyms":[{"name":"apical cell-substrate adherens junction","type":"exact"},{"name":"apical dense plaque","type":"exact"}],"termid":"GO:0005928"}


id: PR:P0CS85
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBCPT2R1.03 gene.","definition_xrefs":["UniProtKB:P0CS85","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein CPT2R1.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBCPT2R1.03","synonyms":[{"name":"Spom972h-SPBCPT2R1.03","type":"exact"}],"termid":"PR:P0CS85"}


id: PR:Q1MTR5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPBC15C4.06c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q1MTR5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized RING finger membrane protein C15C4.06c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC15C4.06c","synonyms":[{"name":"Spom972h-SPBC15C4.06c","type":"exact"}],"termid":"PR:Q1MTR5"}


id: GO:0070110
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex that acts as a receptor for the cytokine ciliary neurotrophic factor (CNTF). In humans the receptor complex is a hexamer composed of two molecules each of CNTF and CNTFR and one molecule each of gp130 and LIFR.","definition_xrefs":["GOC:BHF","GOC:mah","PMID:12707266","GOC:rl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane signaling receptor complex","termid":"GO:0098802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005886"}],"interesting_parent_ids":["GO:0005886","GO:0032991","GO:0005575"],"is_obsolete":false,"name":"ciliary neurotrophic factor receptor complex","termid":"GO:0070110"}


id: PBO:0046628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 9","termid":"PBO:0046628"}


id: PBO:0044985
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAH-box helicase 36","termid":"PBO:0044985"}


id: GO:0017146
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An assembly of four or five subunits which form a structure with an extracellular N-terminus and a large loop that together form the ligand binding domain. The C-terminus is intracellular. The ionotropic glutamate receptor complex itself acts as a ligand gated ion channel; on binding glutamate, charged ions pass through a channel in the center of the receptor complex. NMDA receptors are composed of assemblies of NR1 subunits (Figure 3) and NR2 subunits, which can be one of four separate gene products (NR2A-D). Expression of both subunits are required to form functional channels. The glutamate binding domain is formed at the junction of NR1 and NR2 subunits. NMDA receptors are permeable to calcium ions as well as being permeable to other ions. Thus NMDA receptor activation leads to a calcium influx into the post-synaptic cells, a signal thought to be crucial for the induction of NMDA-receptor dependent LTP and LTD.","definition_xrefs":["PMID:8294079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ionotropic glutamate receptor complex","termid":"GO:0008328"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886","GO:0032991"],"is_obsolete":false,"name":"NMDA selective glutamate receptor complex","synonyms":[{"name":"N-methyl-D-aspartate selective glutamate receptor complex","type":"exact"},{"name":"NMDA-selective glutamate receptor","type":"exact"}],"termid":"GO:0017146"}


id: GO:0045436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cyclization of beta rings at one or both ends of the lycopene molecule (psi, psi-carotene) to form gamma-carotene or the bicyclic beta-carotene (beta, beta-carotene), respectively.","definition_xrefs":["PMID:8837512"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclase activity","termid":"GO:0009975"},{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity","termid":"GO:0016860"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016853"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0009975"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016853","GO:0009975"],"is_obsolete":false,"name":"lycopene beta cyclase activity","secondary_identifiers":["RHEA:32219","MetaCyc:RXN1F-150"],"synonyms":[{"name":"crtL","type":"related"},{"name":"lycopene cyclase","type":"broad"}],"termid":"GO:0045436"}


id: PBO:0004025
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"topoisomerase II-associated deadenylation-dependent mRNA-decapping factor (predicted)","termid":"PBO:0004025"}


id: PBO:0051831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interferon regulatory factor 5 pseudogene 1","termid":"PBO:0051831"}


id: GO:0060363
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which any suture between cranial bones is generated and organized.","definition_xrefs":["GOC:pr","GOC:sl","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"craniofacial suture morphogenesis","termid":"GO:0097094"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cranial suture morphogenesis","termid":"GO:0060363"}


id: PBO:0117416
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zDHHC palmitoyltransferase 11B (putative)","termid":"PBO:0117416"}


id: FYPO:0001565
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-threonine measured in a cell is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased cellular amino acid level","termid":"FYPO:0003986"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased cellular threonine level","synonyms":[{"name":"increased cellular L-threonine level","type":"exact"},{"name":"increased cellular threonine level during mitotic cell cycle","type":"related"},{"name":"increased cellular threonine level during vegetative growth","type":"exact"},{"name":"increased threonine accumulation","type":"related"}],"termid":"FYPO:0001565"}


id: PR:O74333
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- fhn1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74333"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-classical export protein 2 homolog (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1685.13","synonyms":[{"name":"Spom972h-fhn1","type":"exact"}],"termid":"PR:O74333"}


id: GO:0061198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of a spongiform papilla from unspecified parts. The fungiform papilla is a mushroom-shaped papilla of the tongue.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure formation involved in morphogenesis","termid":"GO:0048646"},{"relation_name":"part_of","term_name":"fungiform papilla morphogenesis","termid":"GO:0061197"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"fungiform papilla formation","termid":"GO:0061198"}


id: PBO:0016903
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U3 RNA level regulated post-transcriptionally","termid":"PBO:0016903"}


id: FYPO:0006397
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubules become detached from the nuclear envelope (NE). Normally, some cytoplasmic microtubules are nucleated at the NE and remain attached.","definition_xrefs":["PomBase:mah","PMID:16481403"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal microtubule cytoskeleton morphology during vegetative growth","termid":"FYPO:0001418"},{"relation_name":"is_a","term_name":"abnormal cytoplasmic microtubules","termid":"FYPO:0004088"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000054","FYPO:0001320","FYPO:0000002","FYPO:0005447","FYPO:0002399"],"is_obsolete":false,"name":"cytoplasmic microtubules detached from nuclear envelope","synonyms":[{"name":"cytoplasmic microtubules detached from nuclear envelope during mitotic cell cycle","type":"related"},{"name":"cytoplasmic microtubules detached from nuclear envelope during vegetative growth","type":"exact"},{"name":"cytoplasmic microtubules dissociated from nuclear envelope","type":"exact"}],"termid":"FYPO:0006397"}


id: PBO:0078421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Gly (anticodon GCC) 2-2","termid":"PBO:0078421"}


id: PBO:0039977
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ADP ribosylation factor like GTPase 5A","termid":"PBO:0039977"}


id: PBO:0001965
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone chaperone Rtt106-like (predicted)","termid":"PBO:0001965"}


id: RO:0002248
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship that holds between a substance and a chemical entity, if the chemical entity is part of the substance, and the chemical entity forms the biologically active component of the substance.","direct_ancestors":[{"relation_name":"is_a","term_name":"has_part","termid":"BFO:0000051"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"has_active_ingredient","synonyms":[{"name":"has active pharmaceutical ingredient","type":"related"},{"name":"has active substance","type":"exact"}],"termid":"RO:0002248"}


id: GO:0030895
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Protein complex that mediates editing of the mRNA encoding apolipoprotein B; catalyzes the deamination of C to U (residue 6666 in the human mRNA). Contains a catalytic subunit, APOBEC-1, and other proteins (e.g. human ASP; rat ASP and KSRP).","definition_xrefs":["PMID:10781591","PMID:12683974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA editing complex","termid":"GO:0045293"},{"relation_name":"is_a","term_name":"nuclear protein-containing complex","termid":"GO:0140513"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005634"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005634","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"apolipoprotein B mRNA editing enzyme complex","synonyms":[{"name":"APOBEC","type":"exact"},{"name":"apoB mRNA editing enzyme complex","type":"exact"}],"termid":"GO:0030895"}


id: PBO:0067514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 655, pseudogene","termid":"PBO:0067514"}


id: GO:1990730
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex between the ATPase VCP (p97) and its cofactor p47 (NSFL1C). In human, the protein complex consists of one homotrimer of NSFL1C/p47 per homohexamer of VCP/p97.","definition_xrefs":["PMID:9214505","GOC:PARL","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"VCP-NSFL1C complex","synonyms":[{"name":"p97-p47 complex","type":"exact"}],"termid":"GO:1990730"}


id: PBO:0057302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 514a-3","termid":"PBO:0057302"}


id: PBO:0042522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 2 associated protein 2","termid":"PBO:0042522"}


id: PATO:0000260
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000260 visual_acuity (obsolete PATO:0000260)","termid":"PATO:0000260"}


id: PBO:0066073
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid receptor responder 2 pseudogene 1","termid":"PBO:0066073"}


id: GO:0007099
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell cycle process in which a daughter centriole is formed perpendicular to an existing centriole. An immature centriole contains a ninefold radially symmetric array of single microtubules; mature centrioles consist of a radial array of nine microtubule triplets, doublets, or singlets depending upon the species and cell type. Duplicated centrioles also become the ciliary basal body in cells that form cilia during G0.","definition_xrefs":["GOC:cilia","PMID:9889124","ISBN:0815316194","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"is_a","term_name":"centriole assembly","termid":"GO:0098534"},{"relation_name":"part_of","term_name":"centrosome duplication","termid":"GO:0051298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"part_of","termid":"GO:0000226"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085","GO:0007010","GO:0000226","GO:0007049"],"is_obsolete":false,"name":"centriole replication","secondary_identifiers":["GO:0032054"],"synonyms":[{"name":"centriole duplication","type":"exact"},{"name":"ciliary basal body duplication","type":"related"},{"name":"microtubule basal body duplication","type":"broad"}],"termid":"GO:0007099"}


id: PBO:0063510
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5B divergent transcript","termid":"PBO:0063510"}


id: PBO:0083387
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps essential, verified gene PLP2/YOR281C","termid":"PBO:0083387"}


id: MONDO:0002726
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A variant of cutaneous mastocytosis which occurs as a single lesion usually in infants. It is found mostly in the wrist and trunk and there is no atypical cytomorphology.","definition_xrefs":["MESH:D054705"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"skin cancer","termid":"MONDO:0002898"},{"relation_name":"is_a","term_name":"cutaneous mastocytoma","termid":"MONDO:0019314"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"cutaneous solitary mastocytoma","secondary_identifiers":["DOID:3666","NCIT:C7138","ICDO:9740/1"],"synonyms":[{"name":"skin solitary mastocytoma","type":"exact"},{"name":"solitary mastocytoma of skin","type":"exact"},{"name":"solitary mastocytoma of the skin","type":"exact"}],"termid":"MONDO:0002726","xrefs":{"Monarch":{"xref_id":"0002726"}}}


id: PBO:0088731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione-specific gamma-glutamylcyclotransferase Ggg1","termid":"PBO:0088731"}


id: PBO:0068142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 449","termid":"PBO:0068142"}


id: PBO:0120801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pre-mRNA processing factor 40B","termid":"PBO:0120801"}


id: MONDO:0001572
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A well-circumscribed benign smooth muscle neoplasm characterized by the presence of spindle cells with cigar-shaped nuclei, interlacing fascicles, and a whorled pattern.","definition_xrefs":["NCIT:C3157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign smooth muscle neoplasm","termid":"MONDO:0006106"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leiomyoma","secondary_identifiers":["SCTID:146801000119103","UMLS:C0023267","ICD9:215.9","ICDO:8890/0","MESH:D007889","DOID:127","MEDGEN:9710"],"synonyms":[{"name":"fibroid","type":"exact"},{"name":"fibroid neoplasm","type":"exact"},{"name":"fibroid tumor","type":"exact"},{"name":"fibroid tumour","type":"exact"},{"name":"leiomyoma","type":"exact"},{"name":"leiomyoma, benign","type":"exact"},{"name":"leiomyomatous neoplasm","type":"exact"},{"name":"leiomyomatous neoplasm (morphologic abnormality)","type":"exact"},{"name":"leiomyomatous tumor","type":"exact"},{"name":"leiomyomatous tumour","type":"exact"}],"termid":"MONDO:0001572","xrefs":{"Monarch":{"xref_id":"0001572"}}}


id: SO:0000630
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A start codon upstream of the ORF.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"UTR_region","termid":"SO:0000837"},{"relation_name":"part_of","term_name":"UTR","termid":"SO:0000203"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"upstream_AUG_codon","synonyms":[{"name":"upstream AUG codon","type":"exact"}],"termid":"SO:0000630"}


id: PBO:0062908
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"purinergic receptor P2X 1","termid":"PBO:0062908"}


id: PBO:0064646
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein phosphatase with EF-hand domain 1","termid":"PBO:0064646"}


id: MONDO:0016782
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"motor developmental delay due to 14q32.2 paternally expressed gene defect","termid":"MONDO:0014541"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paternal 14q32.2 hypomethylation syndrome","secondary_identifiers":["Orphanet:254531","UMLS:C5680721","GARD:17222","MEDGEN:1842839"],"termid":"MONDO:0016782","xrefs":{"Monarch":{"xref_id":"0016782"}}}


id: PR:P15567
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ade6 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P15567"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoribosylaminoimidazole carboxylase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1322.13","synonyms":[{"name":"AIR carboxylase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"AIRC (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-ade6","type":"exact"}],"termid":"PR:P15567"}


id: MONDO:0007520
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An EEC syndrome characterized by autosomal dominant inheritance that has material basis in variation in the chromosome region 7q11.2-q21.3.","definition_xrefs":["DOID:0060784","PMID:1424230","PMID:5454938"],"direct_ancestors":[{"relation_name":"is_a","term_name":"EEC syndrome","termid":"MONDO:0010004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0005497"],"is_obsolete":false,"name":"ectrodactyly, ectodermal dysplasia, and cleft lip-palate syndrome 1","secondary_identifiers":["GARD:15063","MEDGEN:343663","UMLS:C1851841","OMIM:129900","MESH:C565062"],"synonyms":[{"name":"EEC","type":"related"},{"name":"EEC syndrome 1","type":"exact"},{"name":"EEC syndrome-1","type":"exact"},{"name":"EEC1","type":"exact"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft LIP/palate syndrome 1","type":"related"},{"name":"ectrodactyly, ectodermal dysplasia, and cleft lip-palate syndrome type 1","type":"exact"}],"termid":"MONDO:0007520","xrefs":{"Monarch":{"xref_id":"0007520"}}}


id: GO:1905444
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of clathrin coat assembly.","definition_xrefs":["GOC:bf","GOC:PARL","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of clathrin coat assembly","termid":"GO:1905443"},{"relation_name":"negatively_regulates","term_name":"clathrin coat assembly","termid":"GO:0048268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"negative regulation of clathrin coat assembly","synonyms":[{"name":"down regulation of clathrin cage assembly","type":"exact"},{"name":"down regulation of clathrin coat assembly","type":"exact"},{"name":"down-regulation of clathrin cage assembly","type":"exact"},{"name":"down-regulation of clathrin coat assembly","type":"exact"},{"name":"downregulation of clathrin cage assembly","type":"exact"},{"name":"downregulation of clathrin coat assembly","type":"exact"},{"name":"inhibition of clathrin cage assembly","type":"narrow"},{"name":"inhibition of clathrin coat assembly","type":"narrow"},{"name":"negative regulation of clathrin cage assembly","type":"exact"}],"termid":"GO:1905444"}


id: PBO:0069433
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 698, pseudogene","termid":"PBO:0069433"}


id: GO:0080185
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A symbiont process in which a molecule secreted by the symbiont activates a resistance gene-dependent defense response signaling pathway in the plant host, in order to activate a hypersensitive response to induce necrosis. In the plant, this process involves the direct or indirect recognition of the symbiont effector protein for example through plant resistance receptor or R proteins (or R genes).","definition_xrefs":["PMID:22241993","PMID:27641772","PMID:23411798","PMID:16497589"],"direct_ancestors":[{"relation_name":"is_a","term_name":"effector-mediated activation of host programmed cell death by symbiont","termid":"GO:0034055"},{"relation_name":"is_a","term_name":"symbiont-mediated perturbation of host resistance gene-dependent defense response","termid":"GO:0052158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"effector-mediated activation of plant hypersensitive response by symbiont","secondary_identifiers":["GO:0052527","GO:0052101","GO:0052423","Wikipedia:Effector-triggered_immunity","GO:0052286"],"synonyms":[{"name":"ETI triggered of host innate immune response","type":"related"},{"name":"ETI-triggered of host innate immune response","type":"related"},{"name":"activation by organism of defense response in host by specific elicitors","type":"broad"},{"name":"activation by organism of host gene-for-gene resistance","type":"exact"},{"name":"activation by organism of host resistance gene-dependent defense response","type":"exact"},{"name":"activation by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"activation of HR","type":"narrow"},{"name":"activation of hypersensitive response","type":"narrow"},{"name":"avirulence protein","type":"related"},{"name":"effector-mediated induction of plant hypersensitive response by symbiont","type":"exact"},{"name":"effector-triggered immunity","type":"broad"},{"name":"effector-triggered induction of host innate immune response","type":"related"},{"name":"effector-triggered induction of plant hypersensitive response by symbiont","type":"related"},{"name":"effector-triggered necrosis","type":"related"},{"name":"induction by organism of defense response in host by specific elicitors","type":"broad"},{"name":"induction by organism of host gene-for-gene resistance","type":"exact"},{"name":"induction by organism of pathogen-race/host plant cultivar-specific resistance in host","type":"broad"},{"name":"induction by organism of resistance gene-dependent defense response of other organism involved in symbiotic interaction","type":"broad"},{"name":"induction by symbiont of host resistance gene-dependent defense response","type":"exact"},{"name":"induction of effector-triggered immunity (ETI)","type":"related"},{"name":"necrotrophic effector","type":"related"},{"name":"positive regulation by organism of defense response in host by specific elicitors","type":"broad"},{"name":"positive regulation by organism of host gene-for-gene resistance","type":"exact"},{"name":"positive regulation by symbiont of host resistance gene-dependent defense response","type":"related"},{"name":"positive regulation by symbiont of plant HR","type":"exact"},{"name":"positive regulation by symbiont of plant hypersensitive response","type":"exact"}],"termid":"GO:0080185"}


id: GO:0050631
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: S-adenosyl-L-methionine + 2 NADPH + palmatine = S-adenosyl-L-homocysteine + corydaline + 2 NADP+.","definition_xrefs":["EC:2.1.1.147","RHEA:14773"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"corydaline synthase activity","secondary_identifiers":["KEGG_REACTION:R07241","MetaCyc:2.1.1.147-RXN"],"synonyms":[{"name":"S-adenosyl-L-methionine:protoberberine 13-C-methyltransferase activity","type":"related"}],"termid":"GO:0050631"}


id: PBO:0077304
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 43","termid":"PBO:0077304"}


id: FYPO:0004558
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, has an abnormal morphology, and in which actin cortical patch localization is abnormal.","definition_xrefs":["PMID:9765059","PomBase:mah"],"direct_ancestors":[{"relation_name":"has_part","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"abnormal actin cortical patch localization during vegetative growth","termid":"FYPO:0000190"},{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0004803"},{"rel_name":"has_part","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0004803"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0004803","FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0001320","FYPO:0000005","FYPO:0000138"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","synonyms":[{"name":"inviable after spore germination, undivided cell, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal F-actin patch localization","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localisation","type":"exact"},{"name":"inviable after spore germination, without cell division, with abnormal cell morphology and abnormal actin patch localization","type":"exact"},{"name":"inviable following spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"inviable germinated spore, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"},{"name":"lethal after spore germination, without cell division, with abnormal cell morphology and abnormal actin cortical patch localization","type":"exact"}],"termid":"FYPO:0004558"}


