# terms

id: PBO:0002794
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribosomal protein subunit L25 (predicted)","termid":"PBO:0002794"}


id: GO:0003377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. A sphingosine-1-phosphate signaling pathway that modulates the rate, frequency, or extent of apoptosis.","definition_xrefs":["GOC:ascb_2009","GOC:dph","GOC:signaling","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of apoptosis by sphingosine-1-phosphate signaling pathway (obsolete GO:0003377)","synonyms":[{"name":"regulation of apoptosis by sphingolipid signaling pathway","type":"broad"},{"name":"regulation of apoptosis by sphingolipid signalling pathway","type":"broad"}],"termid":"GO:0003377"}


id: PBO:0044948
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dihydrofolate reductase pseudogene 3","termid":"PBO:0044948"}


id: PBO:0076862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed 12","termid":"PBO:0076862"}


id: PBO:0035899
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_protein_secretion_during_vegetative_growth","termid":"PBO:0035899"}


id: SO:1000056
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"The DNA mutation affects the amino acid coding sequence of a gene; this region includes both the initiator and terminator codons.","definition_xrefs":["EBI:www.ebi.ac.uk/mutations/recommendations/mutevent.html"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000056 sequence_variant_causing_amino_acid_coding_codon_change_in_transcript (obsolete SO:1000056)","synonyms":[{"name":"mutaton causing amino acid coding codon change in transcript","type":"related"},{"name":"sequence variant causing amino acid coding codon change in transcript","type":"exact"}],"termid":"SO:1000056"}


id: PBO:0082193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Aldose reductase; involved in methylglyoxal, d-xylose, arabinose, and galactose metabolism; stress induced (osmotic, ionic, oxidative, heat shock, starvation and heavy metals); regulated by HOG pathway; overexpression allows xylose fermentation in strains expressing heterologous xylitol dehydrogenase and xylulokinase; protein abundance increases in response to DNA replication stress","termid":"PBO:0082193"}


id: GO:0036107
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate, a precursor of 4-amino-4-deoxy-L-arabinose (L-Ara4N).","definition_xrefs":["PMID:15695810"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-amino-4-deoxy-alpha-L-arabinopyranosyl undecaprenyl phosphate metabolic process (obsolete GO:0036107)","synonyms":[{"name":"4-amino-4-deoxy-alpha-L-arabinose undecaprenyl phosphate metabolic process","type":"exact"},{"name":"undecaprenyl phosphate alpha-L-Ara4N metabolism","type":"exact"}],"termid":"GO:0036107"}


id: GO:0090117
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of low-density lipoprotein particle from endosomes to lysosomes.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endosome to lysosome transport","termid":"GO:0008333"},{"relation_name":"is_a","term_name":"vesicle-mediated cholesterol transport","termid":"GO:0090119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0006810","GO:0051179","GO:0008150","GO:0016192"],"is_obsolete":false,"name":"endosome to lysosome transport of low-density lipoprotein particle","synonyms":[{"name":"endosome to lysosome transport of LDL","type":"exact"}],"termid":"GO:0090117"}


id: GO:2001140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of phospholipid transport.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lipid transport","termid":"GO:0032370"},{"relation_name":"is_a","term_name":"regulation of phospholipid transport","termid":"GO:2001138"},{"relation_name":"positively_regulates","term_name":"phospholipid transport","termid":"GO:0015914"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of phospholipid transport","termid":"GO:2001140"}


id: MONDO:0017077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spina bifida cystica","termid":"MONDO:0017069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myelocystocele","secondary_identifiers":["UMLS:C4551677","GARD:20966","MEDGEN:1639659","SCTID:203994003","icd11.foundation:863949070","Orphanet:268813"],"termid":"MONDO:0017077","xrefs":{"Monarch":{"xref_id":"0017077"}}}


id: PBO:0047350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box and leucine rich repeat protein 3","termid":"PBO:0047350"}


id: MONDO:1011835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital cerebellar anomaly, non-human animal","secondary_identifiers":["OMIA:000176"],"termid":"MONDO:1011835","xrefs":{"Monarch":{"xref_id":"1011835"}}}


id: PBO:0069771
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1054, pseudogene","termid":"PBO:0069771"}


id: GO:0021547
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regionalization process that gives rise to the midbrain-hindbrain boundary. The midbrain-hindbrain domain of the embryonic brain is comprised of the mesencephalic vesicle and the first rhombencephalic vesicle at early somitogenesis stages. An organizing center at the boundary patterns the midbrain and hindbrain primordia of the neural plate.","definition_xrefs":["GOC:isa_complete","GOC:cls","GOC:dgh","GOC:jid","PMID:15541513","GO_REF:0000021","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regionalization","termid":"GO:0003002"},{"relation_name":"is_a","term_name":"formation of anatomical boundary","termid":"GO:0048859"},{"relation_name":"part_of","term_name":"neural plate anterior/posterior regionalization","termid":"GO:0021999"},{"relation_name":"part_of","term_name":"midbrain-hindbrain boundary development","termid":"GO:0030917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"midbrain-hindbrain boundary initiation","synonyms":[{"name":"MHB biosynthesis","type":"exact"},{"name":"MHB formation","type":"exact"},{"name":"isthmus biosynthesis","type":"related"},{"name":"isthmus formation","type":"related"},{"name":"midbrain-hindbrain boundary biosynthesis","type":"exact"},{"name":"midbrain-hindbrain boundary formation","type":"exact"}],"termid":"GO:0021547"}


id: PBO:0013814
data:
  {"annotation_feature_type":"gene","cv_name":"warning","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"was previously annotated as atg14","termid":"PBO:0013814"}


id: PR:O14244
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC6F6.13c gene.","definition_xrefs":["UniProtKB:O14244","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized membrane protein C6F6.13c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.13c","synonyms":[{"name":"Spom972h-SPAC6F6.13c","type":"exact"}],"termid":"PR:O14244"}


id: MONDO:0015171
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital enterocyte heparan sulfate deficiency is characterized by massive enteric protein loss, secretory diarrhea, and intolerance to enteral feeds during the first few weeks of life.","definition_xrefs":["Orphanet:103910"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"congenital enterocyte heparan sulfate deficiency","secondary_identifiers":["MEDGEN:1373054","GARD:19839","UMLS:C4511238","SCTID:725591002"],"termid":"MONDO:0015171","xrefs":{"Monarch":{"xref_id":"0015171"}}}


id: MONDO:0006337
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic disorder characterized by the growth of endometrial tissue in the ovaries. It results in the development of blood filled ovarian cysts (chocolate cysts), and creation of scars and adhesions.","definition_xrefs":["NCIT:C27628"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endometriosis","termid":"MONDO:0005133"},{"relation_name":"is_a","term_name":"ovarian disorder","termid":"MONDO:0005558"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovarian endometriosis","secondary_identifiers":["UMLS:C0156344","ICD9:617.1","SCTID:266589005","DOID:11432","ICD10CM:N80.1","MEDGEN:102350","EFO:1000418"],"synonyms":[{"name":"endometriosis (disease) of ovary","type":"exact"},{"name":"endometriosis of ovary","type":"exact"},{"name":"ovarian endometriosis","type":"exact"},{"name":"ovary endometriosis (disease)","type":"exact"}],"termid":"MONDO:0006337","xrefs":{"Monarch":{"xref_id":"0006337"}}}


id: GO:0019915
data:
  {"annotated_genes":["SJAG_01537","SJAG_03609","SJAG_03162","SJAG_04049","SJAG_01906","SJAG_01180","SJAG_02980","SJAG_04059","SJAG_04041","SJAG_02763"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92041,111776,121672],"is_not":false,"summary":null,"term":"GO:0019915"},{"annotations":[90774,63286,113041,114118,116245,96660,120962],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140042"}]},"cv_name":"biological_process","definition":"The accumulation and maintenance in cells or tissues of lipids, compounds soluble in organic solvents but insoluble or sparingly soluble in aqueous solvents. Lipid reserves can be accumulated during early developmental stages for mobilization and utilization at later stages of development.","definition_xrefs":["GOC:dph","PMID:11102830","GOC:tb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nutrient storage","termid":"GO:0170062"}],"gene_count":10,"genes_by_uniquename":{"SJAG_01180":null,"SJAG_01537":null,"SJAG_01906":null,"SJAG_02763":null,"SJAG_02980":null,"SJAG_03162":null,"SJAG_03609":null,"SJAG_04041":null,"SJAG_04049":null,"SJAG_04059":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lipid storage","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:26774782":null},"synonyms":[{"name":"lipid retention","type":"exact"},{"name":"lipid sequestering","type":"narrow"},{"name":"lipid sequestration","type":"narrow"},{"name":"retention of lipids","type":"exact"},{"name":"sequestering of lipids","type":"narrow"},{"name":"sequestration of lipid","type":"narrow"},{"name":"sequestration of lipids","type":"exact"},{"name":"storage of lipids","type":"exact"}],"termid":"GO:0019915","terms_by_termid":{"GO:0019915":null,"GO:0140042":null}}


id: GO:0031746
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a type 1 cysteinyl leukotriene receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cysteinyl leukotriene receptor binding","termid":"GO:0031745"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488","GO:0005515"],"is_obsolete":false,"name":"type 1 cysteinyl leukotriene receptor binding","synonyms":[{"name":"type 1 cysteinyl leukotriene receptor ligand","type":"narrow"}],"termid":"GO:0031746"}


id: MONDO:0014826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete nucleoside diphosphate-linked moiety X Motif 15 deficiency (obsolete MONDO:0014826)","secondary_identifiers":["OMIM:616903"],"synonyms":[{"name":"NUDT15D","type":"exact"},{"name":"Nudt15 deficiency","type":"related"},{"name":"THIOPURINES, poor metabolism OF, 2","type":"related"},{"name":"THPM2","type":"related"},{"name":"Thiopurines, poor metabolism Of, 2","type":"related"},{"name":"nucleoside diphosphate-linked moiety X Motif 15 deficiency","type":"exact"},{"name":"nucleoside diphosphate-linked moiety X Motif 15 deficiency; NUDT15D","type":"exact"}],"termid":"MONDO:0014826","xrefs":{"Monarch":{"xref_id":"0014826"}}}


id: GO:0002391
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The synthesis or release of platelet activating factor following a stimulus as part of an inflammatory response, resulting in an increase in its intracellular or extracellular levels.","definition_xrefs":["ISBN:0781735149","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"production of molecular mediator involved in inflammatory response","termid":"GO:0002532"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"platelet activating factor production involved in inflammatory response","secondary_identifiers":["GO:0002390","GO:0002535","GO:0002392"],"synonyms":[{"name":"platelet activating factor production","type":"related"},{"name":"platelet activating factor production involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion","type":"narrow"},{"name":"platelet activating factor secretion involved in acute inflammatory response","type":"narrow"},{"name":"platelet activating factor secretion involved in inflammatory response","type":"narrow"}],"termid":"GO:0002391"}


id: GO:0034172
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of toll-like receptor 11 signaling pathway.","definition_xrefs":["PMID:17328678","GOC:add","PMID:16551253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of toll-like receptor 11 signaling pathway","termid":"GO:0034171"},{"relation_name":"is_a","term_name":"negative regulation of cytoplasmic pattern recognition receptor signaling pathway","termid":"GO:0039532"},{"relation_name":"negatively_regulates","term_name":"toll-like receptor 11 signaling pathway","termid":"GO:0034170"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of toll-like receptor 11 signaling pathway","synonyms":[{"name":"negative regulation of TLR11 signaling pathway","type":"exact"},{"name":"negative regulation of toll-like receptor 11 signalling pathway","type":"exact"}],"termid":"GO:0034172"}


id: MONDO:0016120
data:
  {"annotated_genes":["SJAG_02043"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011266"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"skeletal muscle disorder","termid":"MONDO:0020120"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02043":null},"genotype_count":0,"is_obsolete":false,"name":"myotonic syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MedDRA:10028658","UMLS:C0553604","GARD:20372","MEDGEN:107510","MESH:D020967","Orphanet:206970"],"termid":"MONDO:0016120","terms_by_termid":{"MONDO:0011266":null},"xrefs":{"Monarch":{"xref_id":"0016120"}}}


id: PBO:0082077
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5'- and 3'-flap DNA binding protein; required for recruitment of Rad1p-Rad10p to single-strand annealing intermediates with 3' non-homologous tails for removal during double-strand break repair; forms a complex with Rad1p-Rad10p and stimulates its endonuclease activity; green fluorescent protein (GFP)-fusion protein localizes to the nucleus","termid":"PBO:0082077"}


id: PBO:0069455
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 720, pseudogene","termid":"PBO:0069455"}


id: FYPO:0007934
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of dihydrouridine measured in a cell is too low to detect.","definition_xrefs":["PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"substance absent from cell during vegetative growth","termid":"FYPO:0001208"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"dihydrouridine absent from cell","termid":"FYPO:0007934"}


id: PBO:0046633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endogenous retrovirus group W member 14","termid":"PBO:0046633"}


id: PBO:0079265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TTC36 and KMT2A antisense RNA 1","termid":"PBO:0079265"}


id: MONDO:0003096
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the deep soft tissues.","definition_xrefs":["NCIT:C6555"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deep hemangioma","secondary_identifiers":["UMLS:C1333265","MEDGEN:232421","DOID:469"],"synonyms":[{"name":"deep angioma","type":"exact"},{"name":"deep hemangioma","type":"exact"}],"termid":"MONDO:0003096","xrefs":{"Monarch":{"xref_id":"0003096"}}}


id: PBO:0087068
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L33B; rpl33b null mutant exhibits normal growth while rpl33a rpl33b double null mutant is inviable; homologous to mammalian ribosomal protein L35A, no bacterial homolog; RPL33B has a paralog, RPL33A, that arose from the whole genome duplication","termid":"PBO:0087068"}


id: GO:0042198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving nylon, a polymer where the main polymer chain comprises recurring amide groups; these compounds are generally formed from combinations of diamines, diacids and amino acids.","definition_xrefs":["UniProtKB-KW:KW-0549"],"direct_ancestors":[{"relation_name":"is_a","term_name":"xenobiotic metabolic process","termid":"GO:0006805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nylon metabolic process","synonyms":[{"name":"nylon metabolism","type":"exact"}],"termid":"GO:0042198"}


id: PBO:0002463
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translation initiation factor eIF3b (p84)","termid":"PBO:0002463"}


id: GO:0050484
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 5'-GMP + H2O = guanosine + phosphate.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete GMP 5'-nucleotidase activity (obsolete GO:0050484)","secondary_identifiers":["MetaCyc:RXN-7609"],"synonyms":[{"name":"GMP 5' nucleotidase activity","type":"exact"},{"name":"IMP-GMP specific 5'-nucleotidase activity","type":"related"}],"termid":"GO:0050484"}


id: MONDO:0016422
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, endocrine disease characterized by autoimmune thyroid disease associated with at least one other autoimmune disease, such as type I diabetes mellitus, chronic atrophic gastritis, pernicious anemia, vitiligo, alopecia, or myasthenia gravis, but excluding Addison disease.","definition_xrefs":["Orphanet:227982"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"autoimmune polyendocrinopathy","termid":"MONDO:0017278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune polyendocrinopathy type 3","secondary_identifiers":["UMLS:C1535942","ICD9:258.1","SCTID:449731009","GARD:10980","icd11.foundation:1361747293","MEDGEN:453060"],"synonyms":[{"name":"APS type 3","type":"exact"},{"name":"APS3","type":"exact"},{"name":"PAS3","type":"related"},{"name":"autoimmune polyendocrine syndrome type 3","type":"exact"},{"name":"autoimmune polyglandular syndrome type 3","type":"exact"},{"name":"polyglandular autoimmune syndrome type 3","type":"related"}],"termid":"MONDO:0016422","xrefs":{"Monarch":{"xref_id":"0016422"}}}


id: PBO:0080994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger and BTB domain containing 25","termid":"PBO:0080994"}


id: GO:0001089
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Binding to a basal RNA polymerase II transcription factor of the TFIIF class in order to modulate transcription. The transcription factor may or may not also interact selectively with DNA as well.","definition_xrefs":["GOC:txnOH"],"gene_count":0,"genotype_count":0,"name":"obsolete transcription factor activity, TFIIF-class transcription factor binding (obsolete GO:0001089)","synonyms":[{"name":"TFIIF-class binding transcription factor activity","type":"exact"}],"termid":"GO:0001089"}


id: GO:0097540
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Part of the axoneme consisting of the inner two microtubule doublets of the 9+2 axoneme occurring in most motile cilia.","definition_xrefs":["GOC:cilia","GOC:krc","PMID:24283352"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axonemal central apparatus","termid":"GO:1990716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"axonemal central pair","synonyms":[{"name":"axonemal microtubule central pair","type":"exact"},{"name":"axoneme central pair","type":"exact"},{"name":"axoneme microtubule central pair","type":"exact"},{"name":"central pair","type":"broad"},{"name":"central-pair microtubules","type":"related"}],"termid":"GO:0097540"}


id: PBO:0045825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation elongation factor 1 alpha 1 pseudogene 15","termid":"PBO:0045825"}


id: GO:0106078
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: succinyl-CoA + histone = CoA + succinyl-histone.","definition_xrefs":["PMID:29211711"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptide N-succinyltransferase activity","termid":"GO:0106075"},{"relation_name":"is_a","term_name":"histone modifying activity","termid":"GO:0140993"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0140096","GO:0016746"],"is_obsolete":false,"name":"histone succinyltransferase activity","termid":"GO:0106078"}


id: GO:0097320
data:
  {"annotated_genes":["SJAG_00700","SJAG_00185"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[74139,75908],"is_not":false,"summary":null,"term":"GO:0097320"}]},"cv_name":"biological_process","definition":"A membrane tubulation process occurring in a plasma membrane.","definition_xrefs":["GOC:pr","PMID:15252009","GOC:BHF","PMID:20730103"],"direct_ancestors":[{"relation_name":"is_a","term_name":"plasma membrane organization","termid":"GO:0007009"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00185":null,"SJAG_00700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0061024"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0061024"],"is_obsolete":false,"name":"plasma membrane tubulation","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"membrane tubulation","type":"broad"},{"name":"vesicle scission","type":"related"}],"termid":"GO:0097320","terms_by_termid":{"GO:0097320":null}}


id: GO:0015472
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Assists in the correct assembly of fimbria, extracellular organelles that are used to attach a bacterial cell to a surface, but is not a component of the fimbrium when performing its normal biological function.","definition_xrefs":["PMID:7906046","GOC:rb","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete fimbrium-specific chaperone activity (obsolete GO:0015472)","synonyms":[{"name":"fimbrium-specific chaperone activity","type":"exact"}],"termid":"GO:0015472"}


id: MONDO:0003786
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A choriocarcinoma that arises from the testis during childhood.","definition_xrefs":["NCIT:C6544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choriocarcinoma of testis","termid":"MONDO:0003508"},{"relation_name":"is_a","term_name":"childhood testicular germ cell tumor","termid":"MONDO:0003758"},{"relation_name":"is_a","term_name":"malignant childhood germ cell neoplasm","termid":"MONDO:0004479"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"childhood testicular choriocarcinoma","secondary_identifiers":["DOID:6160","MEDGEN:272469","UMLS:C1333006"],"synonyms":[{"name":"childhood choriocarcinoma of testis","type":"exact"},{"name":"childhood choriocarcinoma of the testis","type":"exact"},{"name":"childhood testicular choriocarcinoma","type":"exact"},{"name":"choriocarcinoma of testis of childhood","type":"exact"},{"name":"paediatric choriocarcinoma of testis","type":"exact"},{"name":"paediatric choriocarcinoma of the testis","type":"exact"},{"name":"paediatric testicular choriocarcinoma","type":"exact"},{"name":"pediatric choriocarcinoma of testis","type":"exact"},{"name":"pediatric choriocarcinoma of the testis","type":"exact"},{"name":"pediatric testicular choriocarcinoma","type":"exact"}],"termid":"MONDO:0003786","xrefs":{"Monarch":{"xref_id":"0003786"}}}


id: PBO:0004235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glycine decarboxylase complex subunit H (predicted)","termid":"PBO:0004235"}


id: SO:0001524
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"When a genome contains an abnormal amount of chromosomes.","direct_ancestors":[{"relation_name":"is_a","term_name":"variant_genome","termid":"SO:0001506"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosomally_aberrant_genome","synonyms":[{"name":"chromosomally aberrant genome","type":"related"}],"termid":"SO:0001524"}


id: GO:0098685
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse between the Schaffer collateral axon of a CA3 pyramidal cell and a CA1 pyramidal cell.","definition_xrefs":["PMID:16399689"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"Schaffer collateral - CA1 synapse","termid":"GO:0098685"}


id: MONDO:0001302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Abnormal enlargement of the heart resulting from long-standing hypertension.","definition_xrefs":["NCIT:C4907"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heart disorder","termid":"MONDO:0005267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"hypertensive heart disease","secondary_identifiers":["MEDGEN:508889","ICD10CM:I11","ICD9:402","DOID:11516","ICD10WHO:I11","ICD9:402.9","UMLS:C0152105","SCTID:64715009","icd11.foundation:1210166201"],"synonyms":[{"name":"hypertensive cardiomegaly","type":"related"},{"name":"hypertensive cardiopathy","type":"related"},{"name":"hypertensive cardiovascular disease","type":"related"},{"name":"hypertensive heart disease","type":"exact"}],"termid":"MONDO:0001302","xrefs":{"Monarch":{"xref_id":"0001302"}}}


id: PBO:0043229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 1","termid":"PBO:0043229"}


id: MONDO:1012247
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"rod-cone dysplasia, non-human animal","termid":"MONDO:1011982"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rod-cone dysplasia, domestic cat","secondary_identifiers":["OMIA:000881-9685"],"termid":"MONDO:1012247","xrefs":{"Monarch":{"xref_id":"1012247"}}}


id: MONDO:0011078
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare, congenital malformation syndrome characterized by the association of anterior ocular chamber cleavage disorder with developmental delay, short stature and congenital hypothyroidism. Additional manifestations include cerebellar hypoplasia, tracheal stenosis, narrow external auditory meatus, and hip dislocation. There have been no further description in the literature since 1995.","definition_xrefs":["Orphanet:2321"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anterior chamber cleavage disorder, cerebellar hypoplasia, hypothyroidism, and tracheal stenosis","secondary_identifiers":["MESH:C537694","MEDGEN:316973","GARD:3062","UMLS:C1832362","OMIM:601427"],"synonyms":[{"name":"Jung Wolff back Stahl syndrome","type":"related"},{"name":"anterior chamber cleavage disorder, cerebellar hypoplasia, hypothyroidism, and tracheal stenosis","type":"exact"}],"termid":"MONDO:0011078","xrefs":{"Monarch":{"xref_id":"0011078"}}}


id: PBO:0002485
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endo-1,3-beta-glucanase Eng2","termid":"PBO:0002485"}


id: PBO:0040345
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit f pseudogene 2","termid":"PBO:0040345"}


id: MONDO:0016675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"distal arthrogryposis","termid":"MONDO:0019942"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"distal arthrogryposis type 10","secondary_identifiers":["MEDGEN:349990","MESH:C566069","DOID:0111593","OMIM:187370","Orphanet:251515","SCTID:275336002","GARD:17212","UMLS:C1861238"],"synonyms":[{"name":"DA10","type":"exact"},{"name":"arthrogryposis, distal, type 10","type":"related"},{"name":"congenital plantar contractures","type":"related"},{"name":"distal arthrogryposis type 10","type":"exact"},{"name":"plantar flexion contracture","type":"exact"},{"name":"short Achilles tendon","type":"exact"},{"name":"short tendo calcaneus","type":"exact"},{"name":"tendo calcaneus, short","type":"related"}],"termid":"MONDO:0016675","xrefs":{"Monarch":{"xref_id":"0016675"}}}


id: PBO:0052895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-6","termid":"PBO:0052895"}


id: PBO:0049021
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GPN-loop GTPase 3","termid":"PBO:0049021"}


id: PBO:0003238
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spindle pole body protein Cut12","termid":"PBO:0003238"}


id: MONDO:0100330
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infectious disease that arises from reactivation of a virus from a latent phase to a lytic phase.","definition_xrefs":["PMID:21799704"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"disease arising from reactivation of latent virus","synonyms":[{"name":"latent infection","type":"exact"}],"termid":"MONDO:0100330","xrefs":{"Monarch":{"xref_id":"0100330"}}}


id: PATO:0000341
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000341 sporophytic compatability value (obsolete PATO:0000341)","termid":"PATO:0000341"}


id: PBO:0068527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 128, pseudogene","termid":"PBO:0068527"}


id: SO:0001364
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"5_methylaminomethyluridine is a modified uridine base feature.","direct_ancestors":[{"relation_name":"is_a","term_name":"modified_uridine","termid":"SO:0001277"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"five_methylaminomethyluridine","secondary_identifiers":["RNAMOD:072"],"synonyms":[{"name":"5-methylaminomethyluridine","type":"exact"},{"name":"five methylaminomethyluridine","type":"exact"},{"name":"mnm5U","type":"exact"}],"termid":"SO:0001364"}


id: PBO:0089885
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NatA N-acetyltransferase complex regulatory subunit Naa15","termid":"PBO:0089885"}


id: PBO:0111840
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARID domain","termid":"PBO:0111840"}


id: PBO:0042540
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin dependent kinase 7 pseudogene 1","termid":"PBO:0042540"}


id: PBO:0080137
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vasohibin 1","termid":"PBO:0080137"}


id: PBO:0109466
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDAH family member 2, ADMA-independent","termid":"PBO:0109466"}


id: PBO:0041678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CADM3 antisense RNA 1","termid":"PBO:0041678"}


id: PBO:0046862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fumarylacetoacetate hydrolase domain containing 1","termid":"PBO:0046862"}


id: MONDO:0025193
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculopharyngodistal myopathy (OPDM) is a rare, adult-onset hereditary muscle disease. People with OPDM present with progressive eye and throat (pharyngeal) problems and involvement of the muscles of the lower legs and arms. Symptoms may include eyelid drooping (ptosis), swallowing difficulty, hoarse and nasal voice, leg and arm weakness, as well as muscle wasting in the face and in the legs and arms. Many people have respiratory problems due to respiratory muscle weakness. In rare cases, there is also hearing loss, as well as severe weakness in muscles of the forearms and thighs. As the disease progresses, other muscles may be affected. A blood exam may show an increased creatine kinase level and an abnormal EMG. Inheritance may be autosomal dominant or autosomal recessive. The specific cause is still unknown.","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive muscular dystrophy","termid":"MONDO:0016106"},{"relation_name":"is_a","term_name":"distal myopathy","termid":"MONDO:0018949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"oculopharyngodistal myopathy","secondary_identifiers":["OMIMPS:164310","NANDO:1200219","UMLS:C1834014","MESH:C563508","icd11.foundation:1493269618","Orphanet:98897","SCTID:763829004","GARD:12592","DOID:0081296","MEDGEN:320250"],"synonyms":[{"name":"OPDM","type":"exact"},{"name":"faciooculolaryngopharyngeal myopathy with distal and respiratory involvement","type":"related"},{"name":"oculopharyngeal distal myopathy","type":"exact"},{"name":"oculopharyngodistal myopathy","type":"exact"}],"termid":"MONDO:0025193","xrefs":{"Monarch":{"xref_id":"0025193"}}}


id: GO:0045751
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the Tl signaling pathway.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Toll signaling pathway","termid":"GO:0008592"},{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"negatively_regulates","term_name":"Toll signaling pathway","termid":"GO:0008063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"negative regulation of Toll signaling pathway","synonyms":[{"name":"down regulation of Toll signaling pathway","type":"exact"},{"name":"down-regulation of Toll signaling pathway","type":"exact"},{"name":"downregulation of Toll signaling pathway","type":"exact"},{"name":"inhibition of Toll signaling pathway","type":"narrow"},{"name":"negative regulation of Tl signaling pathway","type":"exact"},{"name":"negative regulation of Tl signalling pathway","type":"exact"}],"termid":"GO:0045751"}


id: MONDO:0014302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Autosomal recessive spastic paraplegia type 62 is a pure or complex form of hereditary spastic paraplegia characterized by an onset in the first decade of life of spastic paraperesis (more prominent in lower than upper extremities) and unsteady gait, as well as increased deep tendon reflexes, amyotrophy, cerebellar ataxia, and flexion contractures of the knees, in some.","definition_xrefs":["Orphanet:401785"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pure hereditary spastic paraplegia","termid":"MONDO:0015149"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 62","secondary_identifiers":["MEDGEN:924879","SCTID:765045003","DOID:0110813","GARD:17657","UMLS:C4284588","OMIM:615681"],"synonyms":[{"name":"ERLIN1 autosomal recessive pure spastic paraplegia","type":"exact"},{"name":"SPG62","type":"exact"},{"name":"autosomal recessive pure spastic paraplegia caused by mutation in ERLIN1","type":"exact"},{"name":"autosomal recessive spastic paraplegia 62","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 62","type":"exact"},{"name":"hereditary spastic paraplegia type 62","type":"exact"},{"name":"spastic paraplegia 62, autosomal recessive","type":"exact"}],"termid":"MONDO:0014302","xrefs":{"Monarch":{"xref_id":"0014302"}}}


id: PBO:0053633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 680","termid":"PBO:0053633"}


id: GO:0036275
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a 5-fluorouracil stimulus.","definition_xrefs":["GOC:hp"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to chemical","termid":"GO:0042221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to 5-fluorouracil","synonyms":[{"name":"response to 5-fluoropyrimidine-2,4(1H,3H)-dione","type":"exact"},{"name":"response to fluorouracil","type":"exact"}],"termid":"GO:0036275"}


id: PBO:0052902
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-13, pseudogene","termid":"PBO:0052902"}


id: PBO:0083059
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dihydrofolate synthetase, involved in folic acid biosynthesis; catalyzes conversion of dihydropteroate to dihydrofolate in folate coenzyme biosynthesis; FOL3 has a paralog, RMA1, that arose from the whole genome duplication","termid":"PBO:0083059"}


id: MONDO:0700294
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"CTCF-related neurodevelopmental disorder","termid":"MONDO:0700294","xrefs":{"Monarch":{"xref_id":"0700294"}}}


id: PBO:0055093
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2511","termid":"PBO:0055093"}


id: GO:0015932
data:
  {"annotated_genes":["SJAG_01960","SJAG_00154","SJAG_03452","SJAG_00760","SJAG_04328","SJAG_04162","SJAG_00612","SJAG_03503","SJAG_00339","SJAG_02050","SJAG_00434","SJAG_03334","SJAG_01177","SJAG_04697","SJAG_04325"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[103383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046964"},{"annotations":[103384],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902557"},{"annotations":[60225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008521"},{"annotations":[59416],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005471"},{"annotations":[104873],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140987"},{"annotations":[72450],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015228"},{"annotations":[75839],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015230"},{"annotations":[95349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005457"},{"annotations":[73743],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005458"},{"annotations":[77421],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0001409"},{"annotations":[77718],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051724"},{"annotations":[81135],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015218"},{"annotations":[77944,76804,90379],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005459"},{"annotations":[77945],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005460"},{"annotations":[79526],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005462"},{"annotations":[79527],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005464"}]},"cv_name":"molecular_function","definition":"Enables the transfer of nucleobases, nucleosides, nucleotides and nucleic acids from one side of a membrane to the other.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":15,"genes_by_uniquename":{"SJAG_00154":null,"SJAG_00339":null,"SJAG_00434":null,"SJAG_00612":null,"SJAG_00760":null,"SJAG_01177":null,"SJAG_01960":null,"SJAG_02050":null,"SJAG_03334":null,"SJAG_03452":null,"SJAG_03503":null,"SJAG_04162":null,"SJAG_04325":null,"SJAG_04328":null,"SJAG_04697":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"nucleobase-containing compound transmembrane transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"nucleobase, nucleoside, nucleotide and nucleic acid transmembrane transporter activity","type":"related"}],"termid":"GO:0015932","terms_by_termid":{"GO:0001409":null,"GO:0005457":null,"GO:0005458":null,"GO:0005459":null,"GO:0005460":null,"GO:0005462":null,"GO:0005464":null,"GO:0005471":null,"GO:0008521":null,"GO:0015218":null,"GO:0015228":null,"GO:0015230":null,"GO:0046964":null,"GO:0051724":null,"GO:0140987":null,"GO:1902557":null}}


id: GO:0140770
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-lysyl-[protein] + tetradecanoyl-CoA = CoA + H+ + N(6)-tetradecanoyl-L-lysyl-[protein].","definition_xrefs":["RHEA:59752","PMID:1402651"],"direct_ancestors":[{"relation_name":"is_a","term_name":"peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0018030"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016746"}],"interesting_parent_ids":["GO:0016740","GO:0003824","GO:0140096","GO:0016746","GO:0003674"],"is_obsolete":false,"name":"CoA-dependent peptidyl-lysine N6-myristoyltransferase activity","termid":"GO:0140770"}


id: PBO:0058728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6856","termid":"PBO:0058728"}


id: GO:0120121
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A three-part cytoskeletal structure in kinetoplastid species linking mitochondrial DNA organised in a kinetoplast through the mitochondrial membranes to the basal body.","definition_xrefs":["PMID:12802053","PMID:24821793","PMID:18059470","PMID:27168148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"cytoskeleton","termid":"GO:0005856"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"tripartite attachment complex","synonyms":[{"name":"TAC","type":"related"}],"termid":"GO:0120121"}


id: GO:0103083
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 2-(4'-methylthio)butylmalate = 3-(4'-methylthio)butylmalate.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete methylthiobutylmalate isomerase activity (obsolete GO:0103083)","termid":"GO:0103083"}


id: FYPO:0002637
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing hygromycin B.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0002060","FYPO:0000003","FYPO:0000257","FYPO:0002058","FYPO:0002057","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on hygromycin B","synonyms":[{"name":"normal cell population growth in presence of hygromycin B","type":"exact"},{"name":"normal cell population growth on hygromycin B","type":"exact"},{"name":"normal vegetative cell population growth on hygromycin B","type":"exact"}],"termid":"FYPO:0002637"}


id: PBO:0041772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calpain 11","termid":"PBO:0041772"}


id: PBO:0016565
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Golgi localized Arf binding gamma-adaptin ortholog Gga22","termid":"PBO:0016565"}


id: FYPO:0006004
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which cytoplasmic microtubule organization is normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PomBase:mah","GO:0031122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal microtubule cytoskeleton organization during vegetative growth","termid":"FYPO:0000899"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002","FYPO:0001320","FYPO:0001312"],"is_obsolete":false,"name":"normal interphase microtubule organization","synonyms":[{"name":"normal cytoplasmic microtubule organization during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule organization during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule organization during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule organization","type":"exact"},{"name":"normal interphase microtubule organisation","type":"exact"}],"termid":"FYPO:0006004"}


id: MONDO:0018509
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A carcinoma that arises from the small intestine. It is composed of malignant squamous cells.","definition_xrefs":["NCIT:C43534"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell carcinoma","termid":"MONDO:0005096"},{"relation_name":"is_a","term_name":"small intestine carcinoma","termid":"MONDO:0005522"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"squamous cell carcinoma of the small intestine","secondary_identifiers":["Orphanet:423968","GARD:21764","UMLS:C1710111","MEDGEN:313711"],"synonyms":[{"name":"small intestinal squamous cell cancer","type":"exact"},{"name":"small intestinal squamous cell carcinoma","type":"exact"},{"name":"small intestine squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of the small bowel","type":"exact"}],"termid":"MONDO:0018509","xrefs":{"Monarch":{"xref_id":"0018509"}}}


id: PBO:0001753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T5orf172 family protein","termid":"PBO:0001753"}


id: MONDO:0859279
data:
  {"annotated_genes":["SJAG_05289"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87853],"is_not":false,"summary":null,"term":"MONDO:0859279"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neuronopathy, distal hereditary motor, autosomal recessive","termid":"MONDO:0015363"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05289":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005559"},{"rel_name":"is_a","termid":"MONDO:0005244"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005559","MONDO:0005244"],"is_obsolete":false,"name":"spinal muscular atrophy, distal, autosomal recessive, 6","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0081425","OMIM:620011","UMLS:C5774201","MEDGEN:1823974"],"synonyms":[{"name":"DSMA6","type":"exact"}],"termid":"MONDO:0859279","terms_by_termid":{"MONDO:0859279":null},"xrefs":{"Monarch":{"xref_id":"0859279"}}}


id: MONDO:0100006
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mast cell activation syndrome where an underlying inflammatory disease is present, often in the form of an IgE-dependent allergy, but there are no KIT-mutated mast cells.","definition_xrefs":["PMID:23409940"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mast cell activation syndrome","termid":"MONDO:0100004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0005046"],"is_obsolete":false,"name":"secondary mast cell activation syndrome","secondary_identifiers":["ICD10CM:D89.43","UMLS:C4267895","MEDGEN:1843472"],"synonyms":[{"name":"secondary MACS","type":"exact"}],"termid":"MONDO:0100006","xrefs":{"Monarch":{"xref_id":"0100006"}}}


id: PBO:0025454
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutathione synthetase deficiency","termid":"PBO:0025454"}


id: GO:2000617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of histone H3-K9 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of histone H3-K9 acetylation (obsolete GO:2000617)","synonyms":[{"name":"positive regulation of histone H3 acetylation at K9","type":"exact"},{"name":"positive regulation of histone H3K9 acetylation","type":"exact"}],"termid":"GO:2000617"}


id: MONDO:0003548
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An invasive breast carcinoma characterized by the presence of tubular and glandular neoplastic cell structures, admixed with islands of neoplastic cells showing squamous differentiation.","definition_xrefs":["NCIT:C40361"],"direct_ancestors":[{"relation_name":"is_a","term_name":"squamous cell breast carcinoma","termid":"MONDO:0006056"},{"relation_name":"is_a","term_name":"adenosquamous carcinoma","termid":"MONDO:0006074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"adenosquamous breast carcinoma","secondary_identifiers":["UMLS:C1510796","DOID:5623","MEDGEN:267645","ONCOTREE:MASC"],"synonyms":[{"name":"adenosquamous breast carcinoma","type":"exact"},{"name":"breast adenosquamous carcinoma","type":"exact"},{"name":"metaplastic adenosquamous carcinoma","type":"related"}],"termid":"MONDO:0003548","xrefs":{"Monarch":{"xref_id":"0003548"}}}


id: MONDO:0003266
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A group of neoplasms which arise from the ependymal lining of the cerebral ventricles and from the remnants of the central canal of the spinal cord. Ependymal tumors occur predominantly in children and young adults with varied morphological features and biological behavior. There are 4 types: ependymoma, anaplastic ependymoma, myxopapillary ependymoma and subependymoma. (WHO)","definition_xrefs":["NCIT:C6770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glioma","termid":"MONDO:0021042"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ependymal tumor","secondary_identifiers":["MEDGEN:232459","ONCOTREE:EPMT","UMLS:C1333407","GARD:16527","EFO:1000027","Orphanet:301"],"synonyms":[{"name":"ependymal neoplasm","type":"exact"},{"name":"ependymal tumor","type":"exact"},{"name":"ependymal tumors","type":"exact"},{"name":"ependymal tumours","type":"exact"},{"name":"ependymomal tumor","type":"related"},{"name":"ependymomal tumour","type":"related"}],"termid":"MONDO:0003266","xrefs":{"Monarch":{"xref_id":"0003266"}}}


id: PBO:0041809
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcium responsive transcription factor","termid":"PBO:0041809"}


id: GO:0042598
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Any of the small, heterogeneous, artifactual, vesicular particles that are formed when some cells are homogenized.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete vesicular fraction (obsolete GO:0042598)","synonyms":[{"name":"vesicular fraction","type":"exact"}],"termid":"GO:0042598"}


id: GO:1901754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of vitamin D3.","definition_xrefs":["GOC:TermGenie","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin D catabolic process","termid":"GO:0042369"},{"relation_name":"is_a","term_name":"alcohol catabolic process","termid":"GO:0046164"},{"relation_name":"is_a","term_name":"vitamin D3 metabolic process","termid":"GO:0070640"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006766","GO:0008150","GO:0044281","GO:0006629"],"is_obsolete":false,"name":"vitamin D3 catabolic process","synonyms":[{"name":"calciol breakdown","type":"exact"},{"name":"calciol catabolic process","type":"exact"},{"name":"calciol catabolism","type":"exact"},{"name":"calciol degradation","type":"exact"},{"name":"cholecalciferol catabolic process","type":"exact"},{"name":"cholecalciferol catabolism","type":"exact"},{"name":"vitamin D3 breakdown","type":"exact"},{"name":"vitamin D3 catabolism","type":"exact"},{"name":"vitamin D3 degradation","type":"exact"}],"termid":"GO:1901754"}


id: FYPO:0007787
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which transcription occurs to a greater extent than normal when the meiotic cell cycle is arrested at the G2/MI phase transition. All genes, or a specific subset of genes, may be affected.","definition_xrefs":["PMID:28476936","PomBase:jh","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased transcription","termid":"FYPO:0002875"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0000294"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0006551","FYPO:0000294","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased transcription during cell cycle arrest at meiotic G2/MI transition","synonyms":[{"name":"increased transcription during abnormal cell cycle arrest at G2/M1 transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at G2/MI transition of meiotic cell cycle","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic G2/MI transition","type":"exact"},{"name":"increased transcription during abnormal cell cycle arrest at meiotic cell cycle G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI phase transition","type":"exact"},{"name":"increased transcription during abnormal meiotic cell cycle arrest at G2/MI transition","type":"exact"}],"termid":"FYPO:0007787"}


id: PBO:0042261
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chaperonin containing TCP1 subunit 5","termid":"PBO:0042261"}


id: PBO:0000002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene characterisation status","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"biological role inferred","termid":"PBO:0000002"}


id: GO:0061077
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process of inhibiting aggregation and assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure that is dependent on interaction with a chaperone.","definition_xrefs":["GOC:dph","GOC:vw"],"gene_count":0,"genotype_count":0,"name":"obsolete chaperone-mediated protein folding (obsolete GO:0061077)","termid":"GO:0061077"}


id: GO:0010642
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the platelet-derived growth factor receptor signaling pathway.","definition_xrefs":["GOC:tb","GOC:dph","GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of signal transduction","termid":"GO:0009968"},{"relation_name":"is_a","term_name":"regulation of platelet-derived growth factor receptor signaling pathway","termid":"GO:0010640"},{"relation_name":"negatively_regulates","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"negatively_regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of platelet-derived growth factor receptor signaling pathway","synonyms":[{"name":"negative regulation of platelet-derived growth factor receptor signalling pathway","type":"exact"}],"termid":"GO:0010642"}


id: MONDO:0006454
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A rare primary thymic carcinoma, characterized by the presence of keratinizing or non-keratinizing malignant squamous cells. Approximately 10-20% of cases occur in combination with thymoma. The prognosis depends on the tumor stage and the degree of cellular differentiation.","definition_xrefs":["NCIT:C6455"],"gene_count":0,"genotype_count":0,"name":"obsolete thymic squamous cell carcinoma (obsolete MONDO:0006454)","termid":"MONDO:0006454","xrefs":{"Monarch":{"xref_id":"0006454"}}}


id: PBO:0053325
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 114","termid":"PBO:0053325"}


id: GO:0003311
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which relatively unspecialized cells acquire specialized structural and functional features that characterize a pancreatic delta cell. A delta cell is a cell of the pancreas that produces somatostatin.","definition_xrefs":["GOC:dph","PMID:11076772"],"direct_ancestors":[{"relation_name":"is_a","term_name":"enteroendocrine cell differentiation","termid":"GO:0035883"},{"relation_name":"is_a","term_name":"neuroendocrine cell differentiation","termid":"GO:0061101"},{"relation_name":"part_of","term_name":"endocrine pancreas development","termid":"GO:0031018"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pancreatic D cell differentiation","synonyms":[{"name":"pancreatic delta cell differentiation","type":"exact"}],"termid":"GO:0003311"}


id: MONDO:0015010
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Atypical glycine encephalopathy is a rare form of glycine encephalopathy (GE) presenting disease onset or clinical manifestations that differ from neonatal or infantile GE.","definition_xrefs":["Orphanet:289863"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine encephalopathy","termid":"MONDO:0011612"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004736"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004736","MONDO:0005066"],"is_obsolete":false,"name":"atypical glycine encephalopathy","secondary_identifiers":["icd11.foundation:51420481","OMIM:617301","UMLS:C4310943","MEDGEN:934910","GARD:17334"],"synonyms":[{"name":"GLYCINE encephalopathy with normal serum GLYCINE","type":"related"},{"name":"Glycine encephalopathy with normal serum Glycine","type":"related"},{"name":"atypical NKA","type":"exact"},{"name":"atypical non-ketotic hyperglycinemia","type":"exact"}],"termid":"MONDO:0015010","xrefs":{"Monarch":{"xref_id":"0015010"}}}


id: GO:0016869
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of an amino group from one position to another within a single molecule.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular transferase activity","termid":"GO:0016866"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0016853","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"intramolecular aminotransferase activity","secondary_identifiers":["EC:5.4.3.-"],"synonyms":[{"name":"intramolecular transferase activity, transferring amino groups","type":"exact"}],"termid":"GO:0016869"}


id: PBO:0083571
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps verified ORF NDC1/YML031W","termid":"PBO:0083571"}


id: PBO:0027698
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mRNA_absent_from_cell","termid":"PBO:0027698"}


id: MOD:01936
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to N6-oleoyl-L-lysine.","definition_xrefs":["RESID:AA0590","PubMed:20942504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N6-acylated L-lysine","termid":"MOD:01875"},{"relation_name":"is_a","term_name":"N-oleoylated residue","termid":"MOD:02011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:01875"},{"rel_name":"is_a","termid":"MOD:01155"}],"interesting_parent_ids":["MOD:01875","MOD:01155"],"is_obsolete":false,"name":"N6-oleoyl-L-lysine","synonyms":[{"name":"(2S)-2-amino-6-([(9Z)-octadec-9-enoyl]amino)hexanoic acid","type":"exact"},{"name":"N6-[(9Z)-1-oxo-9-octadecenyl]lysine","type":"exact"},{"name":"N6-oleoyl-L-lysine","type":"exact"}],"termid":"MOD:01936"}


id: MONDO:0004335
data:
  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id: GO:0016492
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id: MONDO:0044983
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id: PR:O60172
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id: PBO:0058440
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id: GO:0016146
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id: PBO:0066209
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id: GO:0014021
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id: PBO:0059427
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id: MONDO:0007310
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id: PBO:0049475
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id: MONDO:0009373
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id: PBO:0040993
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id: GO:1904400
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id: PBO:0043141
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id: PBO:0110976
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id: MONDO:1012072
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id: GO:0030999
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id: MONDO:0012275
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal valproate syndrome (FVS), is an anticonvulsant drug-related embryofetopathy that can occur when a fetus is exposed to valproic acid (VPA), characterized by distinct facial dysmorphism, congenital anomalies and developmental delay (especially in language and communication).","definition_xrefs":["Orphanet:1906"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"toxic or drug-related embryofetopathy","termid":"MONDO:0016677"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fetal valproate syndrome","secondary_identifiers":["DOID:0060471","OMIM:609442","MedDRA:10016524","MESH:C536525","icd11.foundation:1055155432","GARD:5447","ICD9:759.89","NCIT:C98930","NORD:1141","SCTID:17231009","MEDGEN:65922","UMLS:C0236026"],"synonyms":[{"name":"FVS","type":"related"},{"name":"fetal valproate syndrome","type":"exact"},{"name":"fetal valproic acid syndrome","type":"exact"},{"name":"foetal valproic acid syndrome","type":"exact"},{"name":"susceptibility to valproate embryopathy","type":"related"},{"name":"valproate embryopathy, susceptibility to","type":"related"},{"name":"valproic acid embryopathy","type":"related"}],"termid":"MONDO:0012275","xrefs":{"Monarch":{"xref_id":"0012275"}}}


id: MONDO:1012124
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"hypotrophic axonopathy, non-human animal","termid":"MONDO:1011847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrophic axonopathy, Japanese quail","secondary_identifiers":["OMIA:000545-93934"],"termid":"MONDO:1012124","xrefs":{"Monarch":{"xref_id":"1012124"}}}


id: FYPO:0007388
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the mitotic spindle is assembled in an incorrect orientation. Normally, the spindle is parallel to the long axis of the cell.","definition_xrefs":["PMID:18495844","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle","termid":"FYPO:0000338"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000120","FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000054","FYPO:0002399"],"is_obsolete":false,"name":"misoriented mitotic spindle","synonyms":[{"name":"abnormal angle of mitotic spindle orientation","type":"related"},{"name":"abnormal mitotic spindle orientation","type":"exact"},{"name":"misoriented mitotic spindle during mitotic cell cycle","type":"related"},{"name":"misoriented mitotic spindle during vegetative growth","type":"exact"}],"termid":"FYPO:0007388"}


id: PBO:0012300
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cdc48-Ufd1-Npl4 complex subunit Ufd1 (predicted)","termid":"PBO:0012300"}


id: PBO:0072714
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"relaxin family peptide receptor 1","termid":"PBO:0072714"}


id: SO:0001126
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A motif of five consecutive residues and two hydrogen bonds in which: residue(i) is Serine (S) or Threonine (T), the side-chain O of residue(i) is H-bonded to the main-chain NH of residue(i+2) or (i+3) , the main-chain CO group of residue(i) is H-bonded to the main-chain NH of residue(i+3) or (i+4).","definition_xrefs":["EBIBS:GAR"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_secondary_structure","termid":"SO:0001078"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"serine_threonine_motif","secondary_identifiers":["BS:00229"],"synonyms":[{"name":"serine/threonine motif","type":"exact"},{"name":"st motif","type":"exact"},{"name":"st_motif","type":"exact"}],"termid":"SO:0001126"}


id: PBO:0053236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LHFPL tetraspan subfamily member 2","termid":"PBO:0053236"}


id: PBO:0029820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_mixed_population_including_spores_and_germinated_spores_with_elongated_germ_tubes_(obsolete_FYPO:0002417)","termid":"PBO:0029820"}


id: GO:0052705
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: S-adenosyl-L-methionine + N-alpha-methyl-L-histidine = S-adenosyl-L-homocysteine + N-alpha,N-alpha-dimethyl-L-histidine.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete methylhistidine N-methyltransferase activity (obsolete GO:0052705)","termid":"GO:0052705"}


id: GO:0031467
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A ubiquitin ligase complex in which a cullin from the Cul7 subfamily and a RING domain protein form the catalytic core; substrate specificity is conferred by a Skp1 linker and an F-box protein.","definition_xrefs":["PMID:15571813","PMID:15688063"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cullin-RING ubiquitin ligase complex","termid":"GO:0031461"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"Cul7-RING ubiquitin ligase complex","synonyms":[{"name":"CDL7 complex","type":"exact"},{"name":"CRL7 complex","type":"exact"},{"name":"SCF7 complex","type":"exact"},{"name":"cullin-RING ligase 7","type":"exact"}],"termid":"GO:0031467"}


id: GO:0052157
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that involves recognition of a microbe-associated molecular pattern, and by which a symbiont modulates the frequency, rate or extent of the innate immune response of the host organism; the innate immune response is the host's first line of defense against infection. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation by symbiont of microbe-associated molecular pattern-induced host innate immune response (obsolete GO:0052157)","synonyms":[{"name":"modulation by organism of microbe-associated molecular pattern-induced innate immune response in other organism involved in symbiotic interaction","type":"broad"},{"name":"modulation by symbiont of microbe-associated molecular pattern-induced host innate immunity","type":"exact"},{"name":"modulation by symbiont of pathogen-associated molecular pattern-induced host innate immunity","type":"narrow"}],"termid":"GO:0052157"}


id: GO:0032747
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of interleukin-23 production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of cytokine production","termid":"GO:0001819"},{"relation_name":"is_a","term_name":"regulation of interleukin-23 production","termid":"GO:0032667"},{"relation_name":"positively_regulates","term_name":"interleukin-23 production","termid":"GO:0032627"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0010467","GO:0008150"],"is_obsolete":false,"name":"positive regulation of interleukin-23 production","secondary_identifiers":["GO:0045398"],"synonyms":[{"name":"activation of interleukin-23 production","type":"narrow"},{"name":"positive regulation of IL-23 production","type":"exact"},{"name":"positive regulation of interleukin-23 biosynthetic process","type":"narrow"},{"name":"stimulation of interleukin-23 production","type":"narrow"},{"name":"up regulation of interleukin-23 production","type":"exact"},{"name":"up-regulation of interleukin-23 production","type":"exact"},{"name":"upregulation of interleukin-23 production","type":"exact"}],"termid":"GO:0032747"}


id: PBO:0078492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Ile (anticodon AAT) 11-1","termid":"PBO:0078492"}


id: MONDO:0005343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete viral human hepatitis (obsolete MONDO:0005343)","termid":"MONDO:0005343","xrefs":{"Monarch":{"xref_id":"0005343"}}}


id: GO:0005564
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete cytosolic tRNA (obsolete GO:0005564)","synonyms":[{"name":"cytosolic tRNA","type":"exact"}],"termid":"GO:0005564"}


id: GO:1990754
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. An action potential that occurs in a GABAergic neuron.","definition_xrefs":["PMID:16921370"],"gene_count":0,"genotype_count":0,"name":"obsolete GABAergic neuronal action potential (obsolete GO:1990754)","synonyms":[{"name":"GABAergic neuronal action potential","type":"exact"}],"termid":"GO:1990754"}


id: PBO:0088266
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid desaturase domain protein","termid":"PBO:0088266"}


id: PBO:0052626
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 5","termid":"PBO:0052626"}


id: PBO:0059964
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND3 pseudogene 9","termid":"PBO:0059964"}


id: SO:1000134
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000134 sequence_variant_causing_polypeptide_fusion (obsolete SO:1000134)","synonyms":[{"name":"mutation causing polypeptide fusion","type":"related"},{"name":"sequence variant causing polypeptide fusion","type":"exact"}],"termid":"SO:1000134"}


id: PBO:0005410
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ski complex RNA helicase Ski2 (predicted)","termid":"PBO:0005410"}


id: FYPO:0004411
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing oxaliplatin.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002057"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"}],"interesting_parent_ids":["FYPO:0002057","FYPO:0000003","FYPO:0002058","FYPO:0000139","FYPO:0002060","FYPO:0000257"],"is_obsolete":false,"name":"normal growth on oxaliplatin","synonyms":[{"name":"normal cell population growth in presence of oxaliplatin","type":"exact"},{"name":"normal cell population growth on oxaliplatin","type":"exact"},{"name":"normal cellular response to oxaliplatin","type":"related"},{"name":"normal vegetative cell population growth on oxaliplatin","type":"exact"}],"termid":"FYPO:0004411"}


id: MONDO:0036688
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign mesenchymal tumor arising from skeletal or cardiac muscle.","definition_xrefs":["NCIT:C3358"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign muscle neoplasm","termid":"MONDO:0003061"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rhabdomyoma","secondary_identifiers":["SCTID:402877008","UMLS:C0035411","MEDGEN:48445","ICDO:8900/0","icd11.foundation:1253205675","MESH:D012207"],"synonyms":[{"name":"Rhabdomyomatous neoplasm","type":"exact"},{"name":"rhabdomyoma","type":"exact"},{"name":"rhabdomyoma, benign","type":"exact"}],"termid":"MONDO:0036688","xrefs":{"Monarch":{"xref_id":"0036688"}}}


id: GO:0046446
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving purine alkaloids, compounds derived from purine and composed of an N-containing double ring structure.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alkaloid metabolic process","termid":"GO:0009820"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic process","termid":"GO:0072521"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"purine alkaloid metabolic process","synonyms":[{"name":"purine alkaloid metabolism","type":"exact"}],"termid":"GO:0046446"}


id: FYPO:0001693
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to reversine. Cells stop growing (and may die) at a concentration of reversine that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985","FYPO:0005447","FYPO:0000139","FYPO:0002683"],"is_obsolete":false,"name":"sensitive to reversine","synonyms":[{"name":"hypersensitive to reversine","type":"exact"},{"name":"sensitive to reversine during mitotic cell cycle","type":"related"},{"name":"sensitive to reversine during vegetative growth","type":"exact"}],"termid":"FYPO:0001693"}


id: PBO:0029497
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_vegetative_cell_population_after_spore_germination,_normal_unseptated_germ_tube_morphology_(obsolete_FYPO:0002218)","termid":"PBO:0029497"}


id: PBO:0072150
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15a pseudogene 27","termid":"PBO:0072150"}


id: FYPO:0005106
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of Lys63-specific deubiquitinase activity is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased peptidase activity","termid":"FYPO:0000668"},{"relation_name":"is_a","term_name":"abnormal Lys63-specific deubiquitinase activity","termid":"FYPO:0005104"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000661","FYPO:0001985","FYPO:0000654","FYPO:0000652"],"is_obsolete":false,"name":"decreased Lys63-specific deubiquitinase activity","synonyms":[{"name":"reduced Lys63-specific deubiquitinase activity","type":"exact"}],"termid":"FYPO:0005106"}


id: GO:0035573
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal serine of proteins to form the derivative N,N,N-trimethylserine.","definition_xrefs":["PMID:20668449"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-serine methylation","termid":"GO:0035570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-serine trimethylation","termid":"GO:0035573"}


id: GO:0097623
data:
  {"annotated_genes":["SJAG_04167"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[114402],"is_not":false,"summary":null,"term":"GO:0097623"}]},"cv_name":"biological_process","definition":"The directed movement of potassium ions from inside of a cell, across the plasma membrane and into the extracellular region.","definition_xrefs":["PMID:11932440","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transport","termid":"GO:0071805"},{"relation_name":"is_a","term_name":"export across plasma membrane","termid":"GO:0140115"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04167":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0055085","GO:0006810","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"potassium ion export across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0098668","GO:0071435"],"synonyms":[{"name":"potassium export","type":"broad"},{"name":"potassium export across plasma membrane","type":"exact"},{"name":"potassium ion export","type":"broad"},{"name":"potassium ion export from cell","type":"exact"}],"termid":"GO:0097623","terms_by_termid":{"GO:0097623":null}}


id: MONDO:0015107
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A form of eye disease that is both rare and inborn.","definition_xrefs":["MONDO:patterns/rare_genetic"],"gene_count":0,"genotype_count":0,"name":"obsolete rare genetic eye disease (obsolete MONDO:0015107)","secondary_identifiers":["Orphanet:101435"],"synonyms":[{"name":"rare genetic eye disease","type":"exact"},{"name":"rare genetic ophthalmologic disease","type":"exact"}],"termid":"MONDO:0015107","xrefs":{"Monarch":{"xref_id":"0015107"}}}


id: GO:0046671
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of programmed cell death that occurs in the retina.","definition_xrefs":["GOC:tb","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of programmed cell death","termid":"GO:0043069"},{"relation_name":"is_a","term_name":"regulation of retinal cell programmed cell death","termid":"GO:0046668"},{"relation_name":"is_a","term_name":"negative regulation of developmental process","termid":"GO:0051093"},{"relation_name":"negatively_regulates","term_name":"retinal cell programmed cell death","termid":"GO:0046666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of retinal cell programmed cell death","synonyms":[{"name":"down regulation of retinal programmed cell death","type":"exact"},{"name":"down-regulation of retinal programmed cell death","type":"exact"},{"name":"downregulation of retinal programmed cell death","type":"exact"},{"name":"inhibition of retinal programmed cell death","type":"narrow"},{"name":"negative regulation of retinal programmed cell death","type":"exact"}],"termid":"GO:0046671"}


id: GO:0051202
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving phytochromobilin, the linear tetrapyrrole chromophore required for plant phytochrome photoactivity.","definition_xrefs":["PMID:11500553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tetrapyrrole metabolic process","termid":"GO:0033013"},{"relation_name":"is_a","term_name":"dicarboxylic acid metabolic process","termid":"GO:0043648"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0033013"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0033013","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"phytochromobilin metabolic process","synonyms":[{"name":"phytochromobilin metabolism","type":"exact"}],"termid":"GO:0051202"}


id: GO:0019773
data:
  {"annotated_genes":["SJAG_05316","SJAG_00808","SJAG_04357","SJAG_00778","SJAG_02502","SJAG_04306","SJAG_02562"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[71759,73865,74462,74999,77111,77512,80340],"is_not":false,"summary":null,"term":"GO:0019773"}]},"cv_name":"cellular_component","definition":"The proteasome core subcomplex that constitutes the two outer rings of the proteasome core complex. An example of this component is found in Mus musculus.","definition_xrefs":["GOC:jl","GOC:rb","PMID:10854779","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"intracellular anatomical structure","termid":"GO:0005622"},{"relation_name":"part_of","term_name":"proteasome core complex","termid":"GO:0005839"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00778":null,"SJAG_00808":null,"SJAG_02502":null,"SJAG_02562":null,"SJAG_04306":null,"SJAG_04357":null,"SJAG_05316":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"proteasome core complex, alpha-subunit complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0019773","terms_by_termid":{"GO:0019773":null}}


id: PBO:0091858
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial ribose methyltransferase Mrm1","termid":"PBO:0091858"}


id: PR:Q9USH2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCP31B10.02 gene.","definition_xrefs":["UniProtKB:Q9USH2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UPF0651 protein P31B10.02, mitochondrial (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCP31B10.02","synonyms":[{"name":"Spom972h-SPCP31B10.02","type":"exact"}],"termid":"PR:Q9USH2"}


id: PBO:0016111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNase MRP subunit Rpp21 (predicted)","termid":"PBO:0016111"}


id: MONDO:0014925
data:
  {"annotated_genes":["SJAG_01184"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89144],"is_not":false,"summary":null,"term":"MONDO:0014925"}]},"cv_name":"mondo","definition":"Any epilepsy, familial focal, with variable foci in which the cause of the disease is a mutation in the NPRL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial focal epilepsy with variable foci","termid":"MONDO:0020310"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01184":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"epilepsy, familial focal, with variable foci 3","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617118","MEDGEN:934675","UMLS:C4310708","GARD:18204","DOID:0081423"],"synonyms":[{"name":"FFEVF3","type":"exact"},{"name":"NPRL3 epilepsy, familial focal, with variable foci","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 3","type":"exact"},{"name":"epilepsy, familial focal, with variable foci 3; FFEVF3","type":"exact"},{"name":"epilepsy, familial focal, with variable foci caused by mutation in NPRL3","type":"exact"},{"name":"epilepsy, familial focal, with variable foci type 3","type":"exact"}],"termid":"MONDO:0014925","terms_by_termid":{"MONDO:0014925":null},"xrefs":{"Monarch":{"xref_id":"0014925"}}}


id: PATO:0001263
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of yellow hue and low brightness.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"yellow","termid":"PATO:0000324"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dark yellow","termid":"PATO:0001263"}


id: PBO:0074663
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 50C","termid":"PBO:0074663"}


id: PBO:0084862
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial ribosomal protein of the small subunit","termid":"PBO:0084862"}


id: MONDO:0005720
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A mild, eruptive skin disease of milk cows caused by cowpox virus, with lesions occurring principally on the udder and teats. Human infection may occur while milking an infected animal.","definition_xrefs":["MESH:D015605"],"direct_ancestors":[{"relation_name":"is_a","term_name":"primary viral infectious disease","termid":"MONDO:0100329"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cowpox","secondary_identifiers":["ICD10CM:B08.010","SCTID:70090004","DOID:8956","EFO:0007225","ICD9:051.01","icd11.foundation:1205745537","MEDGEN:3261","UMLS:C0010232"],"synonyms":[{"name":"yaba","type":"exact"}],"termid":"MONDO:0005720","xrefs":{"Monarch":{"xref_id":"0005720"}}}


id: PBO:0028671
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Sad1_foci_during_response_to_DNA_damage","termid":"PBO:0028671"}


id: FYPO:0005875
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"Auxotrophy in which a cell is unable to synthesize proline, and therefore requires proline in the medium for vegetative cell growth.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"auxotrophy","termid":"FYPO:0000128"},{"relation_name":"is_a","term_name":"abnormal cellular physical quality phenotype","termid":"FYPO:0004638"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"growth auxotrophic for proline","synonyms":[{"name":"growth auxotrophic for proline during mitotic cell cycle","type":"related"},{"name":"growth auxotrophic for proline during vegetative growth","type":"exact"},{"name":"proline auxotrophy","type":"exact"}],"termid":"FYPO:0005875"}


id: MONDO:0009136
data:
  {"annotated_genes":["SJAG_00566","SJAG_00083"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87287,87288],"is_not":false,"summary":null,"term":"MONDO:0009136"}]},"cv_name":"mondo","definition":"A dyskeratosis congenita that has material basis in an autosomal recessive mutation of NOLA3 on chromosome 15q14.","definition_xrefs":["DOID:0070015"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dyskeratosis congenita","termid":"MONDO:0015780"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00083":null,"SJAG_00566":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"dyskeratosis congenita, autosomal recessive 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1857144","OMIM:224230","NCIT:C176925","GARD:6300","MEDGEN:341705","MESH:C565611","SCTID:707272006"],"synonyms":[{"name":"DKCB","type":"related"},{"name":"DKCB1","type":"exact"},{"name":"autosomal recessive dyskeratosis congenita","type":"related"},{"name":"autosomal recessive dyskeratosis congenita 1","type":"related"},{"name":"dyskeratosis congenita autosomal recessive","type":"related"},{"name":"dyskeratosis congenita, autosomal recessive 1","type":"exact"},{"name":"dyskeratosis congenita, autosomal recessive type 1","type":"exact"}],"termid":"MONDO:0009136","terms_by_termid":{"MONDO:0009136":null},"xrefs":{"Monarch":{"xref_id":"0009136"}}}


id: GO:0051173
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving nitrogen or nitrogenous compounds.","definition_xrefs":["GOC:ai","GOC:tb"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of nitrogen compound metabolic process (obsolete GO:0051173)","synonyms":[{"name":"positive regulation of nitrogen metabolic process","type":"exact"}],"termid":"GO:0051173"}


id: MONDO:0015718
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mosaic trisomy 12 is a rare chromosomal anomaly syndrome, with a highly variable phenotype, principally characterized by developmental or growth delay, short stature, craniofacial dysmorphism (e.g. turricephaly, tall forehead, downslanting palpebral fissures, posteriorly rotated and low set ears, narrow palate), congenital heart defects (e.g. atrial septal defect, patent ductus arteriosus), hypotonia, and pigmentary dysplasia. Scoliosis, hearing loss, facial/body asymmetry, and intellectual disability have also been reported.","definition_xrefs":["Orphanet:1698"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chromosome 12 disorder","termid":"MONDO:0700019"},{"relation_name":"is_a","term_name":"trisomy","termid":"MONDO:0700065"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mosaic trisomy 12","secondary_identifiers":["GARD:5304","SCTID:764463001","MEDGEN:1631133","UMLS:C4706889"],"synonyms":[{"name":"Mosaic trisomy chromosome 12","type":"exact"},{"name":"Mosaic trisomy type 12","type":"exact"},{"name":"trisomy 12 mosaicism","type":"exact"}],"termid":"MONDO:0015718","xrefs":{"Monarch":{"xref_id":"0015718"}}}


id: PBO:0041270
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q like 2","termid":"PBO:0041270"}


id: MONDO:0008979
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Benign hereditary chorea (BHC) is a rare movement disorder that beginsin infancy or childhood. Signs and symptoms in infants may include low muscle tone, involuntary movements (chorea), lung infections, and respiratory distress. Signs and symptoms in children may include delayed motor and walking milestones, jerky muscle movements (myoclonus), upper limb dystonia, motor tics, and vocal tics. The chorea often improves with time. In some cases, myoclonus persists or worsens. Children with BHC can havenormal intellect, but may have learning and behavior problems. Other signs and symptoms include thyroid problems (e.g., hypothyroidism) and lung disease (e.g., recurring infections). Treatment is tailored to each child. Tetrabenazine and levodopa have been tried in individual cases with some success. BHC is caused by mutations in the NKX2-1 gene (also known as the TITF1 gene). It is passed through families in an autosomal dominant fashion.","definition_xrefs":["GARD:0001305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"choreatic disease","termid":"MONDO:0001595"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chorea, benign familial","secondary_identifiers":["MESH:C565851","MEDGEN:347799","OMIM:215450","UMLS:C1859098","GARD:1305"],"synonyms":[{"name":"benign hereditary chorea","type":"related"},{"name":"chorea familial benign","type":"related"},{"name":"chorea, benign familial","type":"exact"}],"termid":"MONDO:0008979","xrefs":{"Monarch":{"xref_id":"0008979"}}}


id: GO:0016541
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Intervening protein sequence excised from a protein precursor in protein splicing; inteins catalyze their own excision and many also possess endonuclease activity.","definition_xrefs":["PMID:8165123","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intein (obsolete GO:0016541)","synonyms":[{"name":"intein","type":"exact"}],"termid":"GO:0016541"}


id: GO:0033278
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of cells, resulting in the expansion of a cell population in the midbrain.","definition_xrefs":["GOC:dgf","GO_REF:0000021"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural precursor cell proliferation","termid":"GO:0061351"},{"relation_name":"part_of","term_name":"midbrain development","termid":"GO:0030901"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cell proliferation in midbrain","synonyms":[{"name":"cell proliferation in mesencephalon","type":"exact"},{"name":"mesencepahalic cell proliferation","type":"related"}],"termid":"GO:0033278"}


id: GO:0010943
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NADPH + H2O = NMNH + ADP.","definition_xrefs":["RHEA:60820","PMID:12790796","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dinucleotide phosphatase activity","termid":"GO:0004551"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"NADPH pyrophosphatase activity","termid":"GO:0010943"}


id: MONDO:0013962
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A very rare, complex type of hereditary spastic paraplegia characterized by early-onset spastic paraplegia (with spasticity in the lower extremities that progresses to the upper extremities) associated with developmental and motor delay, mild to moderate cognitive and speech delay, skeletal dysmorphism (e.g. kyphosis and pectus), hypertrichosis and mildly impaired vibration sense. SPG53 is due to mutations in the VPS37A gene (8p22) encoding vacuolar protein sorting-associated protein 37A.","definition_xrefs":["Orphanet:319199"],"direct_ancestors":[{"relation_name":"is_a","term_name":"complex hereditary spastic paraplegia","termid":"MONDO:0015150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"hereditary spastic paraplegia 53","secondary_identifiers":["DOID:0110805","GARD:17445","OMIM:614898","UMLS:C3539494","SCTID:723823004","MEDGEN:761340"],"synonyms":[{"name":"SPG53","type":"exact"},{"name":"VPS37A autosomal recessive complex spastic paraplegia","type":"exact"},{"name":"autosomal recessive complex spastic paraplegia caused by mutation in VPS37A","type":"exact"},{"name":"autosomal recessive spastic paraplegia 53","type":"exact"},{"name":"autosomal recessive spastic paraplegia type 53","type":"exact"},{"name":"hereditary spastic paraplegia 53","type":"exact"},{"name":"hereditary spastic paraplegia type 53","type":"exact"},{"name":"spastic paraplegia 53, autosomal recessive","type":"related"}],"termid":"MONDO:0013962","xrefs":{"Monarch":{"xref_id":"0013962"}}}


id: GO:0008167
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. (Was not defined before being made obsolete).","definition_xrefs":["GOC:go_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete sigma virus replication (obsolete GO:0008167)","synonyms":[{"name":"sigma virus replication","type":"exact"}],"termid":"GO:0008167"}


id: PATO:0001187
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A maturity quality inhering in a insect by virtue of the bearer's being in the chrysalis (cocoon) or post larval stage.","definition_xrefs":["WordNet:WordNet"],"direct_ancestors":[{"relation_name":"is_a","term_name":"maturity","termid":"PATO:0000261"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pupal","termid":"PATO:0001187"}


id: PBO:0091543
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Alpha-Amylase Homolog","termid":"PBO:0091543"}


id: GO:0006801
data:
  {"annotated_genes":["SJAG_01734","SJAG_04632","SJAG_04403","SJAG_05181","SJAG_04788","SJAG_00668","SJAG_03653","SJAG_04399","SJAG_03303"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66470,58702,91412,95146,61850,76165,101286,70647,90988],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019430"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving superoxide, the superoxide anion O2- (superoxide free radical), or any compound containing this species.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reactive oxygen species metabolic process","termid":"GO:0072593"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00668":null,"SJAG_01734":null,"SJAG_03303":null,"SJAG_03653":null,"SJAG_04399":null,"SJAG_04403":null,"SJAG_04632":null,"SJAG_04788":null,"SJAG_05181":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"superoxide metabolic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"oxygen free radical metabolic process","type":"exact"},{"name":"oxygen free radical metabolism","type":"exact"},{"name":"superoxide free radical metabolic process","type":"exact"},{"name":"superoxide free radical metabolism","type":"exact"},{"name":"superoxide metabolism","type":"exact"}],"termid":"GO:0006801","terms_by_termid":{"GO:0019430":null}}


id: GO:0001911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the rate of leukocyte mediated cytotoxicity.","definition_xrefs":["GOC:add","ISBN:0781735149","PMID:11911826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of leukocyte mediated cytotoxicity","termid":"GO:0001910"},{"relation_name":"is_a","term_name":"negative regulation of leukocyte mediated immunity","termid":"GO:0002704"},{"relation_name":"is_a","term_name":"negative regulation of cell killing","termid":"GO:0031342"},{"relation_name":"negatively_regulates","term_name":"leukocyte mediated cytotoxicity","termid":"GO:0001909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of leukocyte mediated cytotoxicity","synonyms":[{"name":"down regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"down-regulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"downregulation of leukocyte mediated cytotoxicity","type":"exact"},{"name":"inhibition of leukocyte mediated cytotoxicity","type":"narrow"},{"name":"negative regulation of immune cell mediated cytotoxicity","type":"exact"},{"name":"negative regulation of leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001911"}


id: GO:0060524
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a prostate epithelial cord bifurcates at its end.","definition_xrefs":["GOC:dph","PMID:18977204"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"dichotomous subdivision of an epithelial terminal unit","termid":"GO:0060600"},{"relation_name":"part_of","term_name":"branching involved in prostate gland morphogenesis","termid":"GO:0060442"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"dichotomous subdivision of prostate epithelial cord terminal unit","synonyms":[{"name":"prostate epithelial cord bifurcation","type":"exact"}],"termid":"GO:0060524"}


id: PBO:0082122
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acetyltransferase required for biogenesis of small ribosomal subunit; responsible for incorporation of N4-acetylcytidine into mRNAs; heterozygous mutant shows haploinsufficiency in K1 killer toxin resistance; essential gene; NAT10, the human homolog, implicated in several types of cancer and premature aging","termid":"PBO:0082122"}


id: GO:0006271
data:
  {"annotated_genes":["SJAG_05232","SJAG_04183","SJAG_02199","SJAG_02294","SJAG_01762","SJAG_05239","SJAG_00272","SJAG_03780","SJAG_01823","SJAG_02667","SJAG_00729","SJAG_04879","SJAG_04877","SJAG_00618","SJAG_00198","SJAG_02690","SJAG_00874","SJAG_04190","SJAG_02908","SJAG_04210","SJAG_00814","SJAG_05197","SJAG_03495","SJAG_00884","SJAG_02818","SJAG_00863","SJAG_02182","SJAG_01010"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72921,75399,79336],"is_not":false,"summary":null,"term":"GO:0006271"},{"annotations":[117466,72315,69238,67156,115626,111990,114573],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902983"},{"annotations":[76814],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006273"},{"annotations":[76813,72332],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006272"},{"annotations":[104844,106244,97251,106962,111150,120258],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903459"},{"annotations":[109016,97284,106245,109385,91585,97252,106963,95975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903460"},{"annotations":[103525,74111,94663,102667,97069,102633,106170],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903461"}]},"cv_name":"biological_process","definition":"The process in which an existing DNA strand is extended by activities including the addition of nucleotides to the 3' end of the strand, complementary to an existing template, as part of DNA replication.","definition_xrefs":["ISBN:0815316194","GOC:mah","ISBN:071673706X"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA strand elongation","termid":"GO:0022616"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":28,"genes_by_uniquename":{"SJAG_00198":null,"SJAG_00272":null,"SJAG_00618":null,"SJAG_00729":null,"SJAG_00814":null,"SJAG_00863":null,"SJAG_00874":null,"SJAG_00884":null,"SJAG_01010":null,"SJAG_01762":null,"SJAG_01823":null,"SJAG_02182":null,"SJAG_02199":null,"SJAG_02294":null,"SJAG_02667":null,"SJAG_02690":null,"SJAG_02818":null,"SJAG_02908":null,"SJAG_03495":null,"SJAG_03780":null,"SJAG_04183":null,"SJAG_04190":null,"SJAG_04210":null,"SJAG_04877":null,"SJAG_04879":null,"SJAG_05197":null,"SJAG_05232":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006259"}],"interesting_parent_ids":["GO:0006260","GO:0006259","GO:0008150"],"is_obsolete":false,"name":"DNA strand elongation involved in DNA replication","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-69190"],"synonyms":[{"name":"DNA replication elongation","type":"exact"},{"name":"DNA strand elongation during DNA replication","type":"related"}],"termid":"GO:0006271","terms_by_termid":{"GO:0006271":null,"GO:0006272":null,"GO:0006273":null,"GO:1902983":null,"GO:1903459":null,"GO:1903460":null,"GO:1903461":null}}


id: GO:0005941
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. Used as a holding place for cellular components whose precise localization is, as yet, unknown, or has not been determined by GO (the latter is the major reason for nodes to have this parent); this term should not be used for annotation of gene products.","definition_xrefs":["GOC:ma"],"gene_count":0,"genotype_count":0,"name":"obsolete unlocalized protein complex (obsolete GO:0005941)","synonyms":[{"name":"unlocalized protein complex","type":"exact"}],"termid":"GO:0005941"}


id: PBO:0054342
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1735","termid":"PBO:0054342"}


id: PBO:0076941
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tissue factor pathway inhibitor 2","termid":"PBO:0076941"}


id: PBO:0038420
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A1BG antisense RNA 1","termid":"PBO:0038420"}


id: GO:1903804
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of glycine from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["PMID:23895341","GO_REF:0000075","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycine transport","termid":"GO:0015816"},{"relation_name":"is_a","term_name":"amino acid import across plasma membrane","termid":"GO:0089718"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"glycine import across plasma membrane","secondary_identifiers":["GO:0036233"],"synonyms":[{"name":"glycine import","type":"broad"},{"name":"glycine import into cell","type":"exact"}],"termid":"GO:1903804"}


id: PBO:0077772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"translocase of outer mitochondrial membrane 40","termid":"PBO:0077772"}


id: GO:1903232
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a melanosome, a tissue-specific, membrane-bounded cytoplasmic organelle within which melanin pigments are synthesized and stored.","definition_xrefs":["PMID:22511774","GO_REF:0000079","GOC:TermGenie","GOC:bf","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"melanosome organization","termid":"GO:0032438"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"melanosome assembly","synonyms":[{"name":"melanosome formation","type":"exact"}],"termid":"GO:1903232"}


id: FYPO:0000434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which fermentation is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0001320","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal fermentation","synonyms":[{"name":"fermentative metabolism: normal","type":"related"},{"name":"normal fermentation during mitotic cell cycle","type":"related"},{"name":"normal fermentation during vegetative growth","type":"exact"},{"name":"normal fermentative metabolism","type":"exact"}],"termid":"FYPO:0000434"}


id: GO:0006562
data:
  {"annotated_genes":["SJAG_02235","SJAG_01903"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72211,80068],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010133"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-proline (pyrrolidine-2-carboxylic acid), a chiral, cyclic, nonessential alpha-amino acid found in peptide linkage in proteins.","definition_xrefs":["ISBN:0198506732","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"proline metabolic process","termid":"GO:0006560"},{"relation_name":"is_a","term_name":"glutamine family amino acid catabolic process","termid":"GO:0009065"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01903":null,"SJAG_02235":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0044281","GO:0006520","GO:0008150"],"is_obsolete":false,"name":"L-proline catabolic process","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-70688"],"synonyms":[{"name":"proline breakdown","type":"exact"},{"name":"proline catabolism","type":"exact"},{"name":"proline degradation","type":"exact"}],"termid":"GO:0006562","terms_by_termid":{"GO:0010133":null}}


id: GO:1905556
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a ciliary vesicle. Multiple smaller vesicles dock to the transitional fibers on a mature basal body and then fuse together to form a larger single vesicle. This then fuses with the plasma membrane and forms the ciliary membrane.","definition_xrefs":["PMID:25313408","GO_REF:0000079","GOC:cilia","PMID:13978319","GOC:TermGenie","PMID:25812525","PMID:25805133"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vesicle organization","termid":"GO:0016050"},{"relation_name":"is_a","term_name":"organelle assembly","termid":"GO:0070925"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"ciliary vesicle assembly","synonyms":[{"name":"CV assembly","type":"related"},{"name":"CV formation","type":"related"},{"name":"ciliary vesicle formation","type":"exact"},{"name":"primary ciliary vesicle assembly","type":"exact"},{"name":"primary ciliary vesicle formation","type":"exact"}],"termid":"GO:1905556"}


id: PBO:0077785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA topoisomerase II alpha","termid":"PBO:0077785"}


id: PBO:0086993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Reticulon-interacting protein; ER integral membrane protein involved in the generation of tubular ER morphology; promotes membrane curvature; forms tubules in vitro; regulates the ER asymmetry-induced inheritance block during ER stress; role in ER-derived peroxisomal biogenesis; interacts with Yip1p to mediate membrane traffic and with Sey1p to maintain ER morphology; facilitates lipid exchange between the ER and mitochondria; forms ER foci upon DNA replication stress","termid":"PBO:0086993"}


id: FYPO:0000375
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which programmed cell death by apoptosis does not occur. Apoptosis is a form of cell death characterized by rounding-up of the cell, retraction of pseudopodes, reduction of cellular volume (pyknosis), chromatin condensation, nuclear fragmentation (karyorrhexis), plasma membrane blebbing and fragmentation of the cell into apoptotic bodies.","definition_xrefs":["GO:0006915","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal apoptotic process","termid":"FYPO:0000629"},{"relation_name":"is_a","term_name":"abolished cellular process","termid":"FYPO:0005449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"abolished apoptotic process","synonyms":[{"name":"abolished apoptosis","type":"narrow"},{"name":"absent apoptotic process","type":"exact"},{"name":"apoptosis: absent","type":"related"},{"name":"apoptotic process abolished","type":"exact"}],"termid":"FYPO:0000375"}


id: PBO:0001786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NTPase Ylf2 (predicted)","termid":"PBO:0001786"}


id: MONDO:0001075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A finding of an excessive amount of fat in the stool.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"steatorrhea","secondary_identifiers":["HP:0002570","UMLS:C0038238","MEDGEN:20948","MESH:D045602","NCIT:C86917","SCTID:27868004","DOID:10602"],"synonyms":[{"name":"fatty stool","type":"exact"},{"name":"fatty stool (finding)","type":"exact"},{"name":"steatorrhea","type":"exact"},{"name":"steatorrhea (disease)","type":"exact"}],"termid":"MONDO:0001075","xrefs":{"Monarch":{"xref_id":"0001075"}}}


id: PBO:0054791
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2204","termid":"PBO:0054791"}


id: PBO:0064140
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase N1","termid":"PBO:0064140"}


id: GO:0016156
data:
  {"annotated_genes":["SJAG_00203"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74939],"is_not":false,"summary":null,"term":"GO:0016156"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: NAD+ + succinate = fumarate + H+ + NADH.","definition_xrefs":["RHEA:18281"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate dehydrogenase activity","termid":"GO:0000104"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, NAD or NADP as acceptor","termid":"GO:0016628"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00203":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"fumarate reductase (NADH) activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:FUMARATE-REDUCTASE-NADH-RXN","KEGG_REACTION:R00402","EC:1.3.1.6"],"synonyms":[{"name":"NADH-dependent fumarate reductase activity","type":"related"}],"termid":"GO:0016156","terms_by_termid":{"GO:0016156":null}}


id: PBO:0031232
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_regulation_of_mitotic_metaphase/anaphase_transition","termid":"PBO:0031232"}


id: GO:0044859
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a protein is incorporated into a plasma membrane raft.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein insertion into membrane raft","termid":"GO:0071210"},{"relation_name":"is_a","term_name":"protein insertion into plasma membrane","termid":"GO:0098737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0061024"}],"interesting_parent_ids":["GO:0008150","GO:0061024","GO:0051179"],"is_obsolete":false,"name":"protein insertion into plasma membrane raft","termid":"GO:0044859"}


id: PBO:0067184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 242, pseudogene","termid":"PBO:0067184"}


id: PBO:0077255
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane p24 trafficking protein 6","termid":"PBO:0077255"}


id: GO:0090125
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of the pre-synaptic cell to the post-synaptic cell via adhesion molecules that contributes to synapse maturation.","definition_xrefs":["GOC:tb","GOC:ascb_2009","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell adhesion","termid":"GO:0098609"},{"relation_name":"part_of","term_name":"synapse maturation","termid":"GO:0060074"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0007155"],"is_obsolete":false,"name":"cell-cell adhesion involved in synapse maturation","synonyms":[{"name":"trans-synaptic adhesion","type":"exact"}],"termid":"GO:0090125"}


id: PATO:0001270
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A color consisting of cyan colour and low saturation.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyan","termid":"PATO:0000319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"desaturated cyan","synonyms":[{"name":"pale cyan","type":"exact"}],"termid":"PATO:0001270"}


id: PBO:0112852
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coilin, Mug174","termid":"PBO:0112852"}


id: MONDO:0009585
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited neurodegenerative disorder","termid":"MONDO:0024237"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"encephalopathy due to beta-mercaptolactate-cysteine disulfiduria","secondary_identifiers":["MESH:C563085","GARD:654","UMLS:C0796055","OMIM:249650","MEDGEN:208661","Orphanet:1035"],"synonyms":[{"name":"3-mercaptopyruvate sulfurtransferase deficiency","type":"exact"},{"name":"Ampola syndrome","type":"exact"},{"name":"Beta-mercaptolactate cysteine disulfiduria","type":"related"},{"name":"MCDU","type":"related"},{"name":"disulfiduria, mixed","type":"related"},{"name":"mercaptolactate-cysteine disulfiduria","type":"related"}],"termid":"MONDO:0009585","xrefs":{"Monarch":{"xref_id":"0009585"}}}


id: PBO:0042215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cyclin L2 pseudogene 1","termid":"PBO:0042215"}


id: PBO:0086384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative benzil reductase;(GFP)-fusion protein localizes to the cytoplasm and is induced by the DNA-damaging agent MMS; sequence similarity with short-chain dehydrogenase/reductases; null mutant has increased spontaneous Rad52p foci","termid":"PBO:0086384"}


id: PBO:0016063
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase-like PAN complex subunit Pan3 (predicted)","termid":"PBO:0016063"}


id: MONDO:0006141
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cervical adenocarcinoma characterized by the presence of a prominent villoglandular pattern.","definition_xrefs":["NCIT:C40208"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical mucinous adenocarcinoma","termid":"MONDO:0002742"},{"relation_name":"is_a","term_name":"villous adenocarcinoma","termid":"MONDO:0003204"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"cervical villoglandular adenocarcinoma","secondary_identifiers":["ONCOTREE:VGCE","DOID:8338","MEDGEN:927340","UMLS:C4289808"],"synonyms":[{"name":"cervical adenocarcinoma, villoglandular variant","type":"exact"},{"name":"cervical villoglandular adenocarcinoma","type":"exact"},{"name":"cervical villoglandular carcinoma","type":"exact"},{"name":"villoglandular adenocarcinoma of the cervix","type":"related"},{"name":"villoglandular variant cervical mucinous adenocarcinoma","type":"exact"}],"termid":"MONDO:0006141","xrefs":{"Monarch":{"xref_id":"0006141"}}}


id: GO:0047038
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: D-arabinitol + NAD+ = D-ribulose + H+ + NADH.","definition_xrefs":["RHEA:17389","EC:1.1.1.250"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"D-arabinitol 2-dehydrogenase activity","secondary_identifiers":["MetaCyc:1.1.1.250-RXN","KEGG_REACTION:R07134"],"synonyms":[{"name":"D-arabinitol 2-dehydrogenase (ribulose-forming) activity","type":"related"},{"name":"D-arabinitol:NAD+ 2-oxidoreductase (D-ribulose-forming)","type":"related"}],"termid":"GO:0047038"}


id: PBO:0052870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 5-14, pseudogene","termid":"PBO:0052870"}


id: PBO:0070517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L6 pseudogene 16","termid":"PBO:0070517"}


id: PBO:0041584
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 22 open reading frame 42","termid":"PBO:0041584"}


id: MONDO:0017864
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital pulmonary vein (PV) stenosis or atresia is a rare progressive life-threatening great vessels anomaly characterized by narrowing and obstruction of one or more normally positioned PV at their junction with the left atrium, that usually presents during early infancy with dyspnea, tachypnea, and repeated pulmonary infections, and eventually, when all PV of one lung are affected, results in pulmonary hypertension (PH) and consecutive pulmonary arterial hypertension (PAH). It may manifest as an isolated lesion or associated with other cardiac defects such as congenital pulmonary venous return anomaly and septal defects.","definition_xrefs":["Orphanet:3188"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital anomaly of the great arteries","termid":"MONDO:0020292"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital pulmonary veins atresia or stenosis","secondary_identifiers":["UMLS:C5680865","NANDO:1200964","GARD:4598","MEDGEN:1826176","NANDO:2200273","icd11.foundation:469101490","SCTID:234062003"],"synonyms":[{"name":"pulmonary vein stenosis","type":"related"},{"name":"pulmonary veins stenosis","type":"related"}],"termid":"MONDO:0017864","xrefs":{"Monarch":{"xref_id":"0017864"}}}


id: PBO:0080178
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"voltage dependent anion channel 1 pseudogene 13","termid":"PBO:0080178"}


id: MONDO:0005444
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete leishmaniasis (obsolete MONDO:0005444)","termid":"MONDO:0005444","xrefs":{"Monarch":{"xref_id":"0005444"}}}


id: MOD:00602
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a hydrogen atom of a residue amino or imino group with an methyl group.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylated residue","termid":"MOD:00427"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"N-methylated residue","synonyms":[{"name":"NMeRes","type":"exact"}],"termid":"MOD:00602"}


id: PR:Q9P794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- usp103 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U1 small nuclear ribonucleoprotein C (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBP35G2.09","synonyms":[{"name":"Spom972h-usp103","type":"exact"},{"name":"U1 snRNP C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1-C (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"U1C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9P794"}


id: MOD:00722
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces one hydrogen atom of an L-glutamine residue with one methyl group.","definition_xrefs":["OMSSA:14","Unimod:34#Q"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated glutamine","termid":"MOD:00659"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"monomethylated L-glutamine","synonyms":[{"name":"Me1Gln","type":"exact"},{"name":"methylq","type":"exact"}],"termid":"MOD:00722"}


id: PBO:0057580
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 877","termid":"PBO:0057580"}


id: PBO:0030217
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-alpha,alpha-trehalase_activity_increase_abolished_during_cellular_response_to_nutrient","termid":"PBO:0030217"}


id: MONDO:0700239
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any retinopathy caused by bi-allelic variants in the BEST1 gene.","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited retinal dystrophy","termid":"MONDO:0019118"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"BEST1-related recessive retinopathy","synonyms":[{"name":"BEST1-related recessive retinopathy","type":"exact"}],"termid":"MONDO:0700239","xrefs":{"Monarch":{"xref_id":"0700239"}}}


id: FYPO:0003837
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of RNA polymerase II carboxy-terminal domain kinase activity is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein kinase activity","termid":"FYPO:0002700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0001985","FYPO:0000652","FYPO:0000707","FYPO:0000661"],"is_obsolete":false,"name":"increased RNA polymerase II carboxy-terminal domain kinase activity","termid":"FYPO:0003837"}


id: GO:0071942
data:
  {"annotated_genes":["SJAG_01049","SJAG_01887"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[74101,74610],"is_not":false,"summary":null,"term":"GO:0071942"}]},"cv_name":"cellular_component","definition":"A nucleotide-excision repair complex that is involved in damage sensing during global genome nucleotide excision repair (GG-NER). It is part of the pre-incision (or initial recognition) complex bound to sites of DNA damage. In human, it is composed of XPC, RAD23B and CETN2.","definition_xrefs":["PMID:19941824","PMID:11279143","PMID:15964821"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleotide-excision repair complex","termid":"GO:0000109"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01049":null,"SJAG_01887":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005634"}],"interesting_parent_ids":["GO:0005575","GO:0005634","GO:0032991"],"is_obsolete":false,"name":"XPC complex","references_by_uniquename":{"GO_REF:0000033":null},"termid":"GO:0071942","terms_by_termid":{"GO:0071942":null}}


id: FYPO:0007731
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the distribution of a protein localized to chromatin at the 3' ends of genes is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah","PMID:33771877"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to chromatin during vegetative growth","termid":"FYPO:0001509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001312","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"normal protein localization to chromatin at 3' end of genes","synonyms":[{"name":"normal condensin localization to chromatin at 3' end of genes","type":"narrow"},{"name":"normal protein localisation to chromatin at 3' end of genes","type":"exact"},{"name":"normal protein localization to chromatin at 3' end of genes during mitotic cell cycle","type":"related"},{"name":"normal protein localization to chromatin at 3' end of genes during vegetative growth","type":"exact"},{"name":"normal protein localization to chromatin downstream of genes","type":"exact"}],"termid":"FYPO:0007731"}


id: MONDO:1011525
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hemophilia A that occurs in sheep.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia A, non-human animal","termid":"MONDO:1011408"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemophilia A, sheep","secondary_identifiers":["OMIA:000437-9940"],"termid":"MONDO:1011525","xrefs":{"Monarch":{"xref_id":"1011525"}}}


id: PBO:0056253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"metastasis associated lung adenocarcinoma transcript 1","termid":"PBO:0056253"}


id: FYPO:0007499
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of chromatin binding by a gene product (usually a protein) at one or more cohesin-associated regions (CARs) in a mutant is increased. The affected gene product may be encoded by the mutated gene, or by a different gene, and may normally bind DNA, protein, or both in chromatin.","definition_xrefs":["PomBase:mah","PMID:27226485","PMID:31895039"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased chromatin binding","termid":"FYPO:0002980"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0001985","FYPO:0000652"],"is_obsolete":false,"name":"increased chromatin binding at cohesin associated regions","synonyms":[{"name":"increased chromatin binding at CARs","type":"exact"},{"name":"increased chromatin binding at cohesin associated regions during mitotic cell cycle","type":"related"},{"name":"increased chromatin binding at cohesin associated regions during vegetative growth","type":"exact"}],"termid":"FYPO:0007499"}


id: PBO:0031796
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_G2/M_phase_transition","termid":"PBO:0031796"}


id: MONDO:0013899
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Weill-Marchesani syndrome in which the cause of the disease is a mutation in the LTBP2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Weill-Marchesani syndrome","termid":"MONDO:0018096"},{"relation_name":"is_a","term_name":"LTBP2-related ocular dysgenesis","termid":"MONDO:0100236"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"Weill-Marchesani syndrome 3","secondary_identifiers":["UMLS:C3553785","MEDGEN:766699","OMIM:614819","GARD:15844"],"synonyms":[{"name":"LTBP2 Weill-Marchesani syndrome","type":"exact"},{"name":"WMS3","type":"related"},{"name":"Weill-Marchesani syndrome 3","type":"exact"},{"name":"Weill-Marchesani syndrome 3, recessive","type":"exact"},{"name":"Weill-Marchesani syndrome caused by mutation in LTBP2","type":"exact"},{"name":"Weill-Marchesani syndrome type 3","type":"exact"}],"termid":"MONDO:0013899","xrefs":{"Monarch":{"xref_id":"0013899"}}}


id: PBO:0065231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich 12","termid":"PBO:0065231"}


id: PBO:0120183
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA methyltransferase; methylates N-1 of guanine at position 9 in tRNAs; involved in methylation of guanosine and uridine ribonucleosides in mRNA; involved in distinct tRNA quality control pathway for tRNA-Trp; member of SPOUT (SpoU-TrmD) methyltransferase family; human ortholog TRMT10A plays role in pathogenesis of microcephaly and early onset diabetes; an 18-mer ncRNA translational regulator originates from TRM10 locus; protein abundance increases in response to DNA replication stress","termid":"PBO:0120183"}


id: MONDO:0016054
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete non-syndromic central nervous system malformation (obsolete MONDO:0015219)","termid":"MONDO:0015219"}],"gene_count":0,"genotype_count":0,"name":"obsolete cerebral malformation (obsolete MONDO:0016054)","secondary_identifiers":["NANDO:2100217","Orphanet:199633"],"synonyms":[{"name":"brain malformation","type":"exact"}],"termid":"MONDO:0016054","xrefs":{"Monarch":{"xref_id":"0016054"}}}


id: FYPO:0007465
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which a protein localizes to chromatin over a different spatial extent than normal. The protein may localize to a larger or smaller region than normal, or its localization may be shifted along the length of the chromosome.","definition_xrefs":["PMID:18957202","PMID:31615333","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to chromatin during vegetative growth","termid":"FYPO:0000452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"altered spatial extent of protein localization to chromatin","synonyms":[{"name":"abnormal spatial extent of protein localization to chromatin","type":"exact"},{"name":"altered spatial extent of protein localisation to chromatin","type":"exact"},{"name":"altered spatial extent of protein localization to chromatin during mitotic cell cycle","type":"related"},{"name":"altered spatial extent of protein localization to chromatin during vegetative growth","type":"exact"}],"termid":"FYPO:0007465"}


id: GO:0030471
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The dynamics of the spindle pole body and microtubule cytoskeleton during the cell cycle. Includes spindle pole body duplication and separation and formation and elongation of the mitotic spindle. As in, but not restricted to, the fungi (Fungi, ncbi_taxonomy_id:4751).","definition_xrefs":["ISBN:0879693649"],"gene_count":0,"genotype_count":0,"name":"obsolete spindle pole body and microtubule cycle (sensu Fungi) (obsolete GO:0030471)","synonyms":[{"name":"spindle pole body and microtubule cycle (sensu Fungi)","type":"exact"},{"name":"spindle pole body and microtubule cycle (sensu Saccharomyces)","type":"narrow"}],"termid":"GO:0030471"}


id: PBO:0049647
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H4 clustered histone 1","termid":"PBO:0049647"}


id: MONDO:0002977
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the degeneration of the nervous system due to autoimmunity. Representative examples include multiple sclerosis, Guillain-Barre syndrome, and myasthenia gravis.","definition_xrefs":["NCIT:C99383"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"autoimmune disease","termid":"MONDO:0007179"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"autoimmune disorder of the nervous system","secondary_identifiers":["MESH:D020274","MEDGEN:155946","UMLS:C0751871","DOID:438"],"synonyms":[{"name":"autoimmune disease of nervous system","type":"exact"},{"name":"autoimmune disease, neurologic","type":"exact"},{"name":"autoimmune diseases, nervous system","type":"exact"},{"name":"autoimmune diseases, neurologic","type":"exact"},{"name":"autoimmune disorders of the nervous system","type":"exact"},{"name":"autoimmune disorders, nervous system","type":"exact"},{"name":"autoimmune nervous system diseases","type":"exact"},{"name":"autoimmune nervous system disorder","type":"exact"},{"name":"disease, neurologic autoimmune","type":"exact"},{"name":"diseases, neurologic autoimmune","type":"exact"},{"name":"immune diseases, nervous system","type":"exact"},{"name":"immune disorders, nervous system","type":"exact"},{"name":"nervous system autoimmune disease","type":"exact"},{"name":"nervous system autoimmune diseases","type":"exact"},{"name":"nervous system hypersensitivity reaction type II disease","type":"exact"},{"name":"nervous system immune diseases","type":"exact"},{"name":"nervous system immune disorders","type":"exact"},{"name":"neurologic autoimmune disease","type":"exact"},{"name":"neurologic autoimmune diseases","type":"exact"}],"termid":"MONDO:0002977","xrefs":{"Monarch":{"xref_id":"0002977"}}}


id: GO:0033925
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the endohydrolysis of the N,N'-diacetylchitobiosyl unit in high-mannose glycopeptides and glycoproteins containing the -[Man(GlcNAc)2]Asn-structure. One N-acetyl-D-glucosamine residue remains attached to the protein; the rest of the oligosaccharide is released intact.","definition_xrefs":["EC:3.2.1.96"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0016798","GO:0003674"],"is_obsolete":false,"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosaminidase activity","secondary_identifiers":["Reactome:R-HSA-8853379","MetaCyc:3.2.1.96-RXN"],"synonyms":[{"name":"N,N'-diacetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"di-N-acetylchitobiosyl beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-D-glucosaminidase activity","type":"related"},{"name":"endo-N-acetyl-beta-glucosaminidase activity","type":"related"},{"name":"endo-beta-(1->4)-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase D activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase F activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase H activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase L activity","type":"related"},{"name":"endo-beta-N-acetylglucosaminidase activity","type":"related"},{"name":"endo-beta-acetylglucosaminidase activity","type":"related"},{"name":"endoglycosidase H activity","type":"related"},{"name":"endoglycosidase S activity","type":"related"},{"name":"glycopeptide-D-mannosyl-4-N-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"glycopeptide-D-mannosyl-N4-(N-acetyl-D-glucosaminyl)2-asparagine 1,4-N-acetyl-beta-glucosaminohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein 1,4-N-acetamidodeoxy-beta-D-glycohydrolase activity","type":"related"},{"name":"mannosyl-glycoprotein endo-beta-N-acetylglucosamidase activity","type":"related"}],"termid":"GO:0033925"}


id: GO:0032759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of TRAIL production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of TRAIL production","termid":"GO:0032679"},{"relation_name":"is_a","term_name":"positive regulation of tumor necrosis factor superfamily cytokine production","termid":"GO:1903557"},{"relation_name":"positively_regulates","term_name":"TRAIL production","termid":"GO:0032639"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of TRAIL production","secondary_identifiers":["GO:0045556"],"synonyms":[{"name":"activation of TRAIL production","type":"narrow"},{"name":"positive regulation of TRAIL biosynthetic process","type":"narrow"},{"name":"stimulation of TRAIL production","type":"narrow"},{"name":"up regulation of TRAIL production","type":"exact"},{"name":"up-regulation of TRAIL production","type":"exact"},{"name":"upregulation of TRAIL production","type":"exact"}],"termid":"GO:0032759"}


id: GO:0045157
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Enables the directed movement of electrons within the noncyclic electron transport pathway of photosynthesis.","definition_xrefs":["GOC:ai","ISBN:0716731363"],"gene_count":0,"genotype_count":0,"name":"obsolete electron transporter, transferring electrons within the noncyclic electron transport pathway of photosynthesis activity (obsolete GO:0045157)","termid":"GO:0045157"}


id: PBO:0065567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"prostaglandin F2 receptor inhibitor","termid":"PBO:0065567"}


id: PATO:0002349
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A spatial quality inhering in a bearer by virtue of the bearer's being located toward the base of an organism relative to another entity.","definition_xrefs":["merriam-webster:http://www.merriam-webster.com/dictionary/basal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basal to","termid":"PATO:0002349"}


id: GO:0046297
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways resulting in the formation of 2,4-dichlorobenzoate, a chlorinated aromatic compound which is a key intermediate in the aerobic degradation of polychlorinated biphenyls (PCBs).","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete 2,4-dichlorobenzoate biosynthetic process (obsolete GO:0046297)","synonyms":[{"name":"2,4-dichlorobenzoate anabolism","type":"exact"},{"name":"2,4-dichlorobenzoate biosynthesis","type":"exact"},{"name":"2,4-dichlorobenzoate biosynthetic process","type":"exact"},{"name":"2,4-dichlorobenzoate formation","type":"exact"},{"name":"2,4-dichlorobenzoate synthesis","type":"exact"}],"termid":"GO:0046297"}


id: PBO:0062888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ovo like transcriptional repressor 1","termid":"PBO:0062888"}


id: PBO:0090610
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphomethylpyrimidine kinase","termid":"PBO:0090610"}


id: GO:0010951
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of endopeptidase activity, the endohydrolysis of peptide bonds within proteins.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of peptidase activity","termid":"GO:0010466"},{"relation_name":"is_a","term_name":"regulation of endopeptidase activity","termid":"GO:0052548"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of endopeptidase activity","termid":"GO:0010951"}


id: MOD:00049
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-histidine residue to diphthamide.","definition_xrefs":["ChEBI:16692","RESID:AA0040","PubMed:15316019","PubMed:7430147","Unimod:375#H","DeltaMass:122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified L-histidine residue","termid":"MOD:00909"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine","synonyms":[{"name":"(2R)-1-amino-4-(4-[(2S)-2-amino-2-carboxyethyl]-1H-imidazol-2-yl)-N,N,N-trimethyl-1-oxobutan-2-aminium","type":"exact"},{"name":"(3-[4-(2-amino-2-carboxy-ethyl)-1H-imidazol-2-yl]-1-carbamoyl-propyl)-trimethylammonium","type":"exact"},{"name":"1-azanyl-4-(4-[2-azanyl-2-carboxyethyl]-1H-imidazol-2-yl)-N,N,N-trimethyl-1-oxobutan-2-azanium","type":"exact"},{"name":"2'-[3-carboxamido-3-(trimethylammonio)propyl]-L-histidine","type":"exact"},{"name":"2-[(R)-3-carboxamido-3-(trimethylammonio)propyl]-4-((S)-2-amino-2-carboxyethyl)-1H-imidazole","type":"exact"},{"name":"2-[3-carboxamido-3-(trimethylammonio)propyl]histidine","type":"exact"},{"name":"2-amino-3-[[2-(3-amino-3-carbamoyl-prop-1-enyl)-1,1,3-trimethyl-2,3-dihydroimidazol-5-yl]]propanoic acid","type":"exact"},{"name":"2-amino-4-[[5-(2-amino-2-carboxylato-ethyl)-1,1,3-trimethyl-2,3-dihydroimidazol-2-yl]]but-3-enamide","type":"exact"},{"name":"Diphth","type":"exact"},{"name":"Diphthamide","type":"related"},{"name":"MOD_RES Diphthamide","type":"exact"},{"name":"alpha-(aminocarbonyl)-4-(2-amino-2-carboxyethyl)-N,N,N-trimethyl-1H-imidazole-2-propanaminium","type":"exact"},{"name":"diphthamide","type":"exact"},{"name":"diphthamide (from histidine)","type":"exact"}],"termid":"MOD:00049"}


id: PBO:0013229
data:
  {"annotation_feature_type":"gene","cv_name":"feature_cvtermprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"expressivity","termid":"PBO:0013229"}


id: PR:P78972
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- slp1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:P78972"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat-containing protein slp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC821.08c","synonyms":[{"name":"Spom972h-slp1","type":"exact"}],"termid":"PR:P78972"}


id: PBO:0070078
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 35, pseudogene","termid":"PBO:0070078"}


id: MONDO:0019486
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myoclonic epilepsy of infancy (obsolete MONDO:0019486)","termid":"MONDO:0019486","xrefs":{"Monarch":{"xref_id":"0019486"}}}


id: GO:0036036
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The negative regulation of cell adhesion process in which a cardiac neural crest cell physically separates from the rest of the neural tube.","definition_xrefs":["PMID:20490374","GOC:hjd","PMID:17076275","PMID:18539270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neural crest cell delamination","termid":"GO:0036032"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0007155"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"cardiac neural crest cell delamination","termid":"GO:0036036"}


id: PBO:0058236
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4524b","termid":"PBO:0058236"}


id: MONDO:0025505
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A highly contagious parvovirus infection in mink, caused by mink enteritis virus or the closely related feline panleukopenia virus or canine parvovirus. Transmission usually occurs by the fecal/oral route.","definition_xrefs":["MESH:D053489"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Parvoviridae infectious disease, non-human animal","termid":"MONDO:0700206"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mink viral enteritis","synonyms":[{"name":"enteritides, mink viral","type":"exact"},{"name":"enteritis, infectious, of mink","type":"exact"},{"name":"enteritis, mink viral","type":"exact"},{"name":"mink viral enteritides","type":"exact"},{"name":"viral enteritides, mink","type":"exact"},{"name":"viral enteritis, mink","type":"exact"}],"termid":"MONDO:0025505","xrefs":{"Monarch":{"xref_id":"0025505"}}}


id: GO:0047834
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a D-threo-aldose + NAD+ = a D-threo-aldono-1,5-lactone + NADH.","definition_xrefs":["MetaCyc:D-THREO-ALDOSE-1-DEHYDROGENASE-RXN","EC:1.1.1.122"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"D-threo-aldose 1-dehydrogenase activity","secondary_identifiers":["RHEA:19645"],"synonyms":[{"name":"(2S,3R)-aldose dehydrogenase activity","type":"related"},{"name":"D-threo-aldose:NAD+ 1-oxidoreductase activity","type":"related"},{"name":"L-fucose (D-arabinose) dehydrogenase activity","type":"related"},{"name":"L-fucose dehydrogenase activity","type":"related"},{"name":"dehydrogenase, L-fucose","type":"related"}],"termid":"GO:0047834"}


id: MONDO:0005826
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pneumonia due to aspiration or inhalation of various oily or fatty substances.","definition_xrefs":["MESH:D011017"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aspiration pneumonitis","termid":"MONDO:0002572"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lipid pneumonia","secondary_identifiers":["MEDGEN:19362","SCTID:707449006","UMLS:C0032298","DOID:3241","EFO:0007345"],"synonyms":[{"name":"cholesterol pneumonia","type":"related"},{"name":"exogenous lipoid pneumonia","type":"exact"},{"name":"lipoid pneumonitis","type":"exact"},{"name":"lipoidpneumonitis","type":"exact"},{"name":"pneumonia lipid","type":"related"}],"termid":"MONDO:0005826","xrefs":{"Monarch":{"xref_id":"0005826"}}}


id: FYPO:0005699
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A microtubule cytoskeleton organization phenotype observed in the vegetative growth phase of the life cycle in which nucleation of cytoplasmic microtubules from the spindle pole body (SPB) normal (i.e. indistinguishable from wild type) during interphase of the mitotic cell cycle.","definition_xrefs":["PMID:19001497","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal interphase microtubule nucleation","termid":"FYPO:0003326"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0001312","FYPO:0000002"],"is_obsolete":false,"name":"normal interphase microtubule nucleation from spindle pole body","synonyms":[{"name":"normal cytoplasmic microtubule nucleation from SPB during mitotic interphase","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during interphase during vegetative growth","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during interphase of mitotic cell cycle","type":"exact"},{"name":"normal cytoplasmic microtubule nucleation from spindle pole body during mitotic interphase","type":"exact"},{"name":"normal interphase cytoplasmic microtubule nucleation from spindle pole body","type":"exact"}],"termid":"FYPO:0005699"}


id: PR:O74757
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An E3 ubiquitin-protein ligase synoviolin that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ERAD-associated E3 ubiquitin-protein ligase hrd1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC17D11.02c","secondary_identifiers":["UniProtKB:O74757"],"synonyms":[{"name":"Spom972h-SYVN1","type":"exact"}],"termid":"PR:O74757"}


id: MONDO:1012269
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"tetanic torticollar spasms, non-human animal","termid":"MONDO:1011632"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tetanic torticollar spasms, turkey","secondary_identifiers":["OMIA:000993-9103"],"termid":"MONDO:1012269","xrefs":{"Monarch":{"xref_id":"1012269"}}}


id: PBO:0052894
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin associated protein 10-5","termid":"PBO:0052894"}


id: GO:1905907
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of amyloid fibril formation.","definition_xrefs":["GO_REF:0000058","PMID:23106396","GOC:bc","GOC:TermGenie","GOC:aruk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein metabolic process","termid":"GO:0051248"},{"relation_name":"is_a","term_name":"negative regulation of supramolecular fiber organization","termid":"GO:1902904"},{"relation_name":"is_a","term_name":"regulation of amyloid fibril formation","termid":"GO:1905906"},{"relation_name":"negatively_regulates","term_name":"amyloid fibril formation","termid":"GO:1990000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of amyloid fibril formation","synonyms":[{"name":"down regulation of amyloid fibril assembly","type":"related"},{"name":"down regulation of amyloid fibril formation","type":"exact"},{"name":"down regulation of amyloid structure assembly","type":"related"},{"name":"down regulation of amyloid structure formation","type":"related"},{"name":"down-regulation of amyloid fibril assembly","type":"related"},{"name":"down-regulation of amyloid fibril formation","type":"exact"},{"name":"down-regulation of amyloid structure assembly","type":"related"},{"name":"down-regulation of amyloid structure formation","type":"related"},{"name":"downregulation of amyloid fibril assembly","type":"related"},{"name":"downregulation of amyloid fibril formation","type":"exact"},{"name":"downregulation of amyloid structure assembly","type":"related"},{"name":"downregulation of amyloid structure formation","type":"related"},{"name":"inhibition of amyloid fibril assembly","type":"related"},{"name":"inhibition of amyloid fibril formation","type":"narrow"},{"name":"inhibition of amyloid structure assembly","type":"related"},{"name":"inhibition of amyloid structure formation","type":"related"},{"name":"negative regulation of amyloid fibril assembly","type":"related"},{"name":"negative regulation of amyloid structure assembly","type":"related"},{"name":"negative regulation of amyloid structure formation","type":"related"}],"termid":"GO:1905907"}


id: GO:0003697
data:
  {"annotated_genes":["SJAG_04156","SJAG_02348","SJAG_02667","SJAG_00939","SJAG_02031","SJAG_00857","SJAG_03957","SJAG_01771","SJAG_02627","SJAG_04863","SJAG_04530","SJAG_02822","SJAG_04418","SJAG_01708","SJAG_04245","SJAG_00757","SJAG_00819","SJAG_05214","SJAG_02545","SJAG_04210","SJAG_02828","SJAG_02267","SJAG_03780","SJAG_01354","SJAG_03682","SJAG_00768","SJAG_01887","SJAG_01049","SJAG_00871","SJAG_01076","SJAG_02362","SJAG_03722","SJAG_04933","SJAG_04574","SJAG_03161","SJAG_02194","SJAG_02556","SJAG_01410","SJAG_01698","SJAG_02503","SJAG_03495","SJAG_03855","SJAG_03436","SJAG_01436","SJAG_04410","SJAG_00619","SJAG_04995","SJAG_00327","SJAG_00399","SJAG_03886","SJAG_02079","SJAG_05239","SJAG_00796","SJAG_03068","SJAG_01762","SJAG_03832","SJAG_00884","SJAG_01677"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[64852,66291,66370,66812,67171,67202,71882,72181,72922,73943,74105,74267,74614,74683,75361,75400,75819,76689,76726,76816,76888,77067,77227,77621,77738,78984,79153,79337,80215,81219,91722,91818,98265,107360,109704,111130,112550,113538,114112,114477,115629,116708,118318,118593,118875,120264],"is_not":false,"summary":null,"term":"GO:0003697"},{"annotations":[115449,105200,117977,114586],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990814"},{"annotations":[79000],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098505"},{"annotations":[82223,113589,82161,64505,98082,110159,112424],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043047"}]},"cv_name":"molecular_function","definition":"Binding to single-stranded DNA.","definition_xrefs":["GOC:vw","PMID:22976174","GOC:elh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"DNA binding","termid":"GO:0003677"}],"gene_count":58,"genes_by_uniquename":{"SJAG_00327":null,"SJAG_00399":null,"SJAG_00619":null,"SJAG_00757":null,"SJAG_00768":null,"SJAG_00796":null,"SJAG_00819":null,"SJAG_00857":null,"SJAG_00871":null,"SJAG_00884":null,"SJAG_00939":null,"SJAG_01049":null,"SJAG_01076":null,"SJAG_01354":null,"SJAG_01410":null,"SJAG_01436":null,"SJAG_01677":null,"SJAG_01698":null,"SJAG_01708":null,"SJAG_01762":null,"SJAG_01771":null,"SJAG_01887":null,"SJAG_02031":null,"SJAG_02079":null,"SJAG_02194":null,"SJAG_02267":null,"SJAG_02348":null,"SJAG_02362":null,"SJAG_02503":null,"SJAG_02545":null,"SJAG_02556":null,"SJAG_02627":null,"SJAG_02667":null,"SJAG_02822":null,"SJAG_02828":null,"SJAG_03068":null,"SJAG_03161":null,"SJAG_03436":null,"SJAG_03495":null,"SJAG_03682":null,"SJAG_03722":null,"SJAG_03780":null,"SJAG_03832":null,"SJAG_03855":null,"SJAG_03886":null,"SJAG_03957":null,"SJAG_04156":null,"SJAG_04210":null,"SJAG_04245":null,"SJAG_04410":null,"SJAG_04418":null,"SJAG_04530":null,"SJAG_04574":null,"SJAG_04863":null,"SJAG_04933":null,"SJAG_04995":null,"SJAG_05214":null,"SJAG_05239":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003677"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003677","GO:0005488","GO:0003674"],"is_obsolete":false,"name":"single-stranded DNA binding","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0003698","GO:0003699"],"synonyms":[{"name":"ssDNA binding","type":"exact"}],"termid":"GO:0003697","terms_by_termid":{"GO:0003697":null,"GO:0043047":null,"GO:0098505":null,"GO:1990814":null}}


id: GO:0061468
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A membrane-bound intermediate cleavage-stage structure of individual or groups of chromosomes that coalesces and fuses with other karyomeres to form a nucleus during interphase. Karyomere formation occurs in blastomeres undergoing rapid cell division.","definition_xrefs":["GOC:dph","PMID:22863006","PMID:12734396"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"karyomere","termid":"GO:0061468"}


id: MONDO:0017965
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete syndrome with 46,XX disorder of sex development (obsolete MONDO:0017965)","secondary_identifiers":["Orphanet:325109"],"synonyms":[{"name":"syndrome with 46,XX DSD","type":"exact"}],"termid":"MONDO:0017965","xrefs":{"Monarch":{"xref_id":"0017965"}}}


id: FYPO:0005918
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype the localization of a protein to heterochromatin in subtelomeric regions is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to chromatin","termid":"FYPO:0006631"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000002","FYPO:0001985","FYPO:0000138"],"is_obsolete":false,"name":"decreased protein localization to subtelomeric heterochromatin","synonyms":[{"name":"decreased protein localisation to subtelomeric heterochromatin","type":"exact"},{"name":"decreased protein localization to heterochromatin at subtelomere","type":"exact"},{"name":"decreased protein localization to telomeric heterochromatin","type":"related"},{"name":"reduced protein localization to subtelomeric heterochromatin","type":"exact"}],"termid":"FYPO:0005918"}


id: PBO:0046986
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 86 member K, pseudogene","termid":"PBO:0046986"}


id: GO:0032061
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the rate of translation as a result of a stimulus indicating an increase or decrease in the concentration of solutes outside the organism or cell.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of translation in response to stress","termid":"GO:0032055"},{"relation_name":"is_a","term_name":"regulation of translation in response to osmotic stress","termid":"GO:0043557"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of translation in response to osmotic stress","synonyms":[{"name":"down regulation of translation in response to osmotic stress","type":"exact"},{"name":"down-regulation of translation in response to osmotic stress","type":"exact"},{"name":"downregulation of translation in response to osmotic stress","type":"exact"},{"name":"inhibition of translation in response to osmotic stress","type":"narrow"}],"termid":"GO:0032061"}


id: GO:0042498
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a lipopeptide containing a nonprotein moiety consisting of two acyl groups.","definition_xrefs":["PMID:12524386","PMID:2757794","GOC:add","PMID:12077222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopeptide binding","termid":"GO:0071723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0008289"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674","GO:0008289"],"is_obsolete":false,"name":"diacyl lipopeptide binding","synonyms":[{"name":"bacterial diacyl lipopeptide binding","type":"narrow"},{"name":"bacterial diacyl lipoprotein binding","type":"related"},{"name":"diacylated lipopeptide binding","type":"exact"}],"termid":"GO:0042498"}


id: PBO:0048807
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"G protein subunit beta 1 like","termid":"PBO:0048807"}


id: PBO:0069618
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 895, pseudogene","termid":"PBO:0069618"}


id: PBO:0068998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 242, pseudogene","termid":"PBO:0068998"}


id: MONDO:1010931
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polymyositis that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polymyositis, non-human animal","termid":"MONDO:1010203"},{"relation_name":"is_a","term_name":"myopathy, dog","termid":"MONDO:1010917"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymyositis, dog","secondary_identifiers":["OMIA:001874-9615"],"termid":"MONDO:1010931","xrefs":{"Monarch":{"xref_id":"1010931"}}}


id: MONDO:0020725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Anemia due to a disorder that is persistent or long-standing in nature.","definition_xrefs":["NCIT:C35659"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anemia","termid":"MONDO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"anemia due to chronic disorder","secondary_identifiers":["UMLS:C0002873","ICD9:285.29","SCTID:234347009","MEDGEN:507442"],"synonyms":[{"name":"Secondary anaemia","type":"related"},{"name":"Secondary anemia","type":"related"},{"name":"anaemia due to Chronic Disorder","type":"related"},{"name":"anaemia of chronic disease","type":"exact"},{"name":"anaemia of chronic disorder","type":"related"},{"name":"anaemia of chronic illness","type":"exact"},{"name":"anaemia of chronic inflammation","type":"exact"},{"name":"anaemia of systemic disease","type":"related"},{"name":"anemia due to Chronic Disorder","type":"related"},{"name":"anemia due to chronic disorder","type":"exact"},{"name":"anemia of chronic disease","type":"exact"},{"name":"anemia of chronic disorder","type":"related"},{"name":"anemia of chronic illness","type":"exact"},{"name":"anemia of chronic inflammation","type":"exact"},{"name":"anemia of systemic disease","type":"related"}],"termid":"MONDO:0020725","xrefs":{"Monarch":{"xref_id":"0020725"}}}


id: MOD:01883
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that crosslinks two residues by rearrangement and condensation of a cysteine with the carbonyl of the preceding residue to form a 5-imidazolinone ring.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"5-imidazolinone ring crosslinked residues","termid":"MOD:00691"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-imidazolinone ring crosslinked residues (Cys)","termid":"MOD:01883"}


id: PBO:0004629
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"N2,N2-dimethylguanosine tRNA methyltransferase","termid":"PBO:0004629"}


id: MONDO:1012213
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"persistent right aortic arch, non-human animal","termid":"MONDO:1011644"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"persistent right aortic arch, domestic cat","secondary_identifiers":["OMIA:000794-9685"],"termid":"MONDO:1012213","xrefs":{"Monarch":{"xref_id":"1012213"}}}


id: PR:O14399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ned8 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O14399"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquitin-like protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC12D12.08c","synonyms":[{"name":"Spom972h-ned8","type":"exact"}],"termid":"PR:O14399"}


id: MONDO:0957463
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tuberculosis","termid":"MONDO:0018076"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary bone and joint tuberculosis","secondary_identifiers":["Orphanet:645822","UMLS:C5816705","MEDGEN:1843400"],"termid":"MONDO:0957463","xrefs":{"Monarch":{"xref_id":"0957463"}}}


id: MONDO:0976128
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"epilepsy, idiopathic generalized, susceptibility to, 19","secondary_identifiers":["OMIM:621064"],"termid":"MONDO:0976128","xrefs":{"Monarch":{"xref_id":"0976128"}}}


id: FYPO:0002448
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which Dsc E3 ubiquitin ligase complex assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein complex assembly during vegetative growth","termid":"FYPO:0001215"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000002","FYPO:0001312","FYPO:0000257"],"is_obsolete":false,"name":"normal Dsc complex assembly","synonyms":[{"name":"normal Dsc E3 ubiquitin ligase assembly","type":"exact"},{"name":"normal Dsc complex assembly during mitotic cell cycle","type":"related"},{"name":"normal Dsc complex assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0002448"}


id: PBO:0050344
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heterogeneous nuclear ribonucleoprotein A1 pseudogene 46","termid":"PBO:0050344"}


id: GO:0016803
data:
  {"annotated_genes":["SJAG_01088"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[77746],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004301"}]},"cv_name":"molecular_function","definition":"Catalysis of the hydrolysis of an ether bond, -O-.","definition_xrefs":["EC:3.3.2.-","GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on ether bonds","termid":"GO:0016801"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01088":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016787"],"is_obsolete":false,"name":"ether hydrolase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-8874435"],"termid":"GO:0016803","terms_by_termid":{"GO:0004301":null}}


id: PBO:0018054
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent RNA helicase Slh1, human ASCC3 ortholog (predicted)","termid":"PBO:0018054"}


id: PBO:0045919
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"EFCAB13 divergent transcript","termid":"PBO:0045919"}


id: PBO:0072414
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S27 pseudogene 19","termid":"PBO:0072414"}


id: GO:0043486
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The replacement, within chromatin, of resident histones or histone subunits with alternative, sometimes variant, histones or subunits.","definition_xrefs":["PMID:15066277","PMID:11735001","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete histone exchange (obsolete GO:0043486)","synonyms":[{"name":"histone chaperone","type":"related"},{"name":"histone replacement","type":"exact"}],"termid":"GO:0043486"}


id: GO:0015232
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of heme from one side of a membrane to the other.","definition_xrefs":["PMID:29549126"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transmembrane transporter activity","termid":"GO:0022857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"heme transmembrane transporter activity","secondary_identifiers":["Reactome:R-HSA-917892","Reactome:R-HSA-9661408","Reactome:R-HSA-917870"],"synonyms":[{"name":"haem transporter activity","type":"exact"},{"name":"heme transporter activity","type":"broad"}],"termid":"GO:0015232"}


id: GO:0061475
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process of coupling valine to valyl-tRNA in the cytosol, catalyzed by valyl-tRNA synthetase. In tRNA aminoacylation, the amino acid is first activated by linkage to AMP and then transferred to either the 2'- or the 3'-hydroxyl group of the 3'-adenosine residue of the tRNA.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"valyl-tRNA aminoacylation","termid":"GO:0006438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0010467","GO:0006399","GO:0006520"],"is_obsolete":false,"name":"cytosolic valyl-tRNA aminoacylation","termid":"GO:0061475"}


id: PBO:0030829
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_phosphoribosylamine-glycine_ligase_activity","termid":"PBO:0030829"}


id: PBO:0000610
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3.1.3.16","termid":"PBO:0000610"}


id: PBO:0060211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multivesicular body subunit 12A","termid":"PBO:0060211"}


id: FYPO:0004324
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 16 of histone H4 in at the centromere central core occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah","PMID:18493607"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K16 acetylation during vegetative growth","termid":"FYPO:0007632"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K16 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H4-K16 acetylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H4K16 acetylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0004324"}


id: PBO:0015679
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase Ecm14 (predicted)","termid":"PBO:0015679"}


id: PBO:0028828
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_RNA_localization_to_chromatin","termid":"PBO:0028828"}


id: PBO:0047269
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 247 member A","termid":"PBO:0047269"}


id: MONDO:0006153
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A non-neoplastic hamartomatous polyp that arises from the colon. It is characterized by the presence of tortuous and cystically dilated glands, edematous changes, and inflammation.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"colonic neoplasm","termid":"MONDO:0005401"},{"relation_name":"is_a","term_name":"colorectal juvenile polyp","termid":"MONDO:0006161"},{"relation_name":"is_a","term_name":"polyp of colon","termid":"MONDO:0021400"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"colon juvenile polyp","secondary_identifiers":["MEDGEN:234160","EFO:1000185","NCIT:C5518","UMLS:C1333090"],"synonyms":[{"name":"colon retention polyp","type":"exact"},{"name":"colonic juvenile polyp","type":"exact"},{"name":"colonic retention polyp","type":"exact"},{"name":"juvenile polyp of colon","type":"exact"},{"name":"juvenile polyp of the colon","type":"exact"},{"name":"retention polyp of colon","type":"exact"},{"name":"retention polyp of the colon","type":"exact"}],"termid":"MONDO:0006153","xrefs":{"Monarch":{"xref_id":"0006153"}}}


id: PBO:0086190
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein similar to heat shock transcription factor; multicopy suppressor of pseudohyphal growth defects of ammonium permease mutants","termid":"PBO:0086190"}


id: GO:0004437
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the removal of a phosphate group from phosphorylated myo-inositol (1,2,3,5/4,6-cyclohexanehexol) or a phosphatidylinositol.","definition_xrefs":["GOC:hb"],"gene_count":0,"genotype_count":0,"name":"obsolete inositol or phosphatidylinositol phosphatase activity (obsolete GO:0004437)","synonyms":[{"name":"inositol or phosphatidylinositol phosphatase activity","type":"exact"},{"name":"inositol/phosphatidylinositol phosphatase activity","type":"exact"}],"termid":"GO:0004437"}


id: PBO:0036373
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Uner Tan Syndrome","termid":"PBO:0036373"}


id: PBO:0035789
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_replication_fork_pausing_at_highly_transcribed_RNA_polymerase_II_genes","termid":"PBO:0035789"}


id: MONDO:0017924
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"This syndrome is characterized by progressive calcification of the brain and spinal cord, growth retardation, psychomotor anomalies, deafness and anemia. Renal tubular acidosis was found in one patient. To date, this syndrome has been described in only two patients from one family.","definition_xrefs":["Orphanet:3240"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"central nervous system calcification-deafness-tubular acidosis-anemia syndrome","secondary_identifiers":["UMLS:C4512024","GARD:18789","MEDGEN:1384620"],"synonyms":[{"name":"Yoshimura-Takeshita syndrome","type":"exact"}],"termid":"MONDO:0017924","xrefs":{"Monarch":{"xref_id":"0017924"}}}


id: PBO:0053535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 537","termid":"PBO:0053535"}


id: GO:1902923
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of poly(3-hydroxyvalerate).","definition_xrefs":["GOC:TermGenie","GO_REF:0000068","GOC:mengo_curators","PMID:21705209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"poly(hydroxyvalerate) biosynthetic process","termid":"GO:1902921"},{"relation_name":"is_a","term_name":"poly(3-hydroxyvalerate) metabolic process","termid":"GO:1902922"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"poly(3-hydroxyvalerate) biosynthetic process","synonyms":[{"name":"poly(3-hydroxyvalerate) anabolism","type":"exact"},{"name":"poly(3-hydroxyvalerate) biosynthesis","type":"exact"},{"name":"poly(3-hydroxyvalerate) formation","type":"exact"},{"name":"poly(3-hydroxyvalerate) synthesis","type":"exact"}],"termid":"GO:1902923"}


id: GO:0032919
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of spermine by addition of acetyl groups.","definition_xrefs":["GOC:mlg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermine metabolic process","termid":"GO:0008215"},{"relation_name":"is_a","term_name":"polyamine acetylation","termid":"GO:0032917"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"spermine acetylation","termid":"GO:0032919"}


id: PBO:0029601
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_transporter_activity","termid":"PBO:0029601"}


id: PBO:0063268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protocadherin beta 14","termid":"PBO:0063268"}


id: GO:1902614
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of anti-Mullerian hormone signaling pathway.","definition_xrefs":["GOC:hjd","GO_REF:0000058","GOC:TermGenie","PMID:23624077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transmembrane receptor protein serine/threonine kinase signaling pathway","termid":"GO:0090100"},{"relation_name":"is_a","term_name":"regulation of anti-Mullerian hormone signaling pathway","termid":"GO:1902612"},{"relation_name":"positively_regulates","term_name":"anti-Mullerian hormone receptor signaling pathway","termid":"GO:1990262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of anti-Mullerian hormone signaling pathway","synonyms":[{"name":"activation of anti-Mullerian hormone signaling pathway","type":"narrow"},{"name":"up regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"up-regulation of anti-Mullerian hormone signaling pathway","type":"exact"},{"name":"upregulation of anti-Mullerian hormone signaling pathway","type":"exact"}],"termid":"GO:1902614"}


id: GO:0035847
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The progression of an epithelium of the uterus over time from its initial formation to the mature structure. An epithelium is a tissue that covers the internal or external surfaces of an anatomical structure.","definition_xrefs":["GOC:bf","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oviduct epithelium development","termid":"GO:0035846"},{"relation_name":"part_of","term_name":"uterus development","termid":"GO:0060065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"uterine epithelium development","synonyms":[{"name":"uterus epithelial development","type":"exact"}],"termid":"GO:0035847"}


id: GO:0106202
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the translocation of amno acids and peptides linked to a decarboxylation reaction.","definition_xrefs":["GOC:hjd"],"gene_count":0,"genotype_count":0,"name":"obsolete translocase activity acting on amino acids and peptides linked to a decarboxylation reaction (obsolete GO:0106202)","termid":"GO:0106202"}


id: GO:0008992
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of Ala-Gly bond in repressor lexA.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete repressor LexA activity (obsolete GO:0008992)","synonyms":[{"name":"LexA repressor","type":"related"},{"name":"repressor LexA activity","type":"exact"},{"name":"repressor lexA","type":"related"}],"termid":"GO:0008992"}


id: PBO:0034769
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial carrier, ATP:ADP antiporter, calcium binding subfamily (predicted)","termid":"PBO:0034769"}


id: PBO:0089693
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Munc family exocytic/endocytic regulator Ync13","termid":"PBO:0089693"}


id: GO:0050148
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + nucleoside 5'-phosphate = AMP + 5'-phosphonucleoside 3'-diphosphate.","definition_xrefs":["RHEA:12713"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diphosphotransferase activity","termid":"GO:0016778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"nucleotide diphosphokinase activity","secondary_identifiers":["EC:2.7.6.4","MetaCyc:NUCLEOTIDE-PYROPHOSPHOKINASE-RXN"],"synonyms":[{"name":"ATP nucleotide 3'-pyrophosphokinase activity","type":"related"},{"name":"ATP:nucleoside-5'-phosphate diphosphotransferase activity","type":"related"},{"name":"ATP:nucleotide pyrophosphotransferase activity","type":"related"},{"name":"nucleotide 3'-pyrophosphokinase activity","type":"related"},{"name":"nucleotide pyrophosphokinase activity","type":"exact"}],"termid":"GO:0050148"}


id: GO:1902024
data:
  {"annotated_genes":["SJAG_03256","SJAG_03400"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[99363],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0089708"},{"annotations":[105848],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0090513"}]},"cv_name":"biological_process","definition":"The directed movement of a L-histidine into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["PMID:22822152","GOC:TermGenie","GOC:kmv"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organic cation transport","termid":"GO:0015695"},{"relation_name":"is_a","term_name":"aromatic amino acid transport","termid":"GO:0015801"},{"relation_name":"is_a","term_name":"basic amino acid transport","termid":"GO:0015802"},{"relation_name":"is_a","term_name":"L-amino acid transport","termid":"GO:0015807"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03256":null,"SJAG_03400":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150","GO:0051179"],"is_obsolete":false,"name":"L-histidine transport","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:1902024","terms_by_termid":{"GO:0089708":null,"GO:0090513":null}}


id: GO:0072540
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a CD4-positive, alpha-beta T cell becomes committed to becoming a T-helper 17 cell, a CD4-positive, alpha-beta T cell with the phenotype RORgamma-t-positive that produces IL-17.","definition_xrefs":["GOC:BHF","GOC:ebc","CL:0000899"],"direct_ancestors":[{"relation_name":"is_a","term_name":"T-helper cell lineage commitment","termid":"GO:0002295"},{"relation_name":"part_of","term_name":"T-helper 17 cell differentiation","termid":"GO:0072539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"T-helper 17 cell lineage commitment","synonyms":[{"name":"T-helper 17 cell fate commitment","type":"exact"},{"name":"Th17 cell lineage commitment","type":"exact"},{"name":"Th17 fate commitment","type":"exact"}],"termid":"GO:0072540"}


id: GO:0070713
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification of an RNA molecule by insertion of an guanosine-cytidine dinucleotide.","definition_xrefs":["GOC:cb","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA dinucleotide insertion","termid":"GO:0070707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"RNA guanosine-cytidine insertion","synonyms":[{"name":"RNA GC insertion","type":"exact"}],"termid":"GO:0070713"}


id: GO:0010093
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the identity of a floral organ primordium is specified. Identity is considered to be the aggregate of characteristics by which a structure is recognized.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"is_a","term_name":"specification of plant organ identity","termid":"GO:0090701"},{"relation_name":"part_of","term_name":"floral organ formation","termid":"GO:0048449"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"specification of floral organ identity","termid":"GO:0010093"}


id: MONDO:0023194
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete frints de Smet Fabry Fryns syndrome (obsolete MONDO:0023194)","termid":"MONDO:0023194","xrefs":{"Monarch":{"xref_id":"0023194"}}}


id: PBO:0062158
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 4 subfamily H member 6 pseudogene","termid":"PBO:0062158"}


id: GO:0072522
data:
  {"annotated_genes":["SJAG_03140","SJAG_04849","SJAG_03096","SJAG_05277","SJAG_04627","SJAG_04122","SJAG_01661","SJAG_02564","SJAG_02364","SJAG_03881","SJAG_01566","SJAG_04634","SJAG_04970","SJAG_04693","SJAG_01582","SJAG_02741","SJAG_00836","SJAG_00133","SJAG_02850","SJAG_02618","SJAG_03064","SJAG_01081","SJAG_03925","SJAG_01814","SJAG_00964","SJAG_00985","SJAG_MIT37","SJAG_00915","SJAG_03290","SJAG_04681","SJAG_03114","SJAG_02598","SJAG_07003","SJAG_00044","SJAG_00542","SJAG_02006","SJAG_02158","SJAG_00438","SJAG_02105","SJAG_03310","SJAG_04288","SJAG_02769","SJAG_MIT09","SJAG_MIT15","SJAG_03731","SJAG_03313","SJAG_01859","SJAG_02038","SJAG_03298","SJAG_04007","SJAG_01139","SJAG_05204","SJAG_00866","SJAG_00134","SJAG_03811","SJAG_00427","SJAG_04123","SJAG_02887","SJAG_03946","SJAG_01070","SJAG_06634","SJAG_01500","SJAG_04422","SJAG_04882","SJAG_02889","SJAG_01298","SJAG_01402","SJAG_03355"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[80903,78932],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044208"},{"annotations":[60793,67024,73548,57449,71877,65666,78708,58584],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006189"},{"annotations":[100383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006085"},{"annotations":[70567,93448],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019427"},{"annotations":[119115],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990181"},{"annotations":[72718,119422,112414],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046084"},{"annotations":[75891],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006168"},{"annotations":[90888],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046086"},{"annotations":[118899],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006169"},{"annotations":[73852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006172"},{"annotations":[57600,75892],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044209"},{"annotations":[73357,80625,91384,73088,81877],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015937"},{"annotations":[64139,60086],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006177"},{"annotations":[103215,77590],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032263"},{"annotations":[65870,76859,104251],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006183"},{"annotations":[66177,77591],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032264"},{"annotations":[71866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006190"},{"annotations":[109511],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035338"},{"annotations":[67512],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2001295"},{"annotations":[76708,115144,79599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009435"},{"annotations":[72763,82014],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0034355"},{"annotations":[70956,99483,93934],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006741"},{"annotations":[120071],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905707"},{"annotations":[109845,117906,109937,121158,105053,95289,105693,94863,103837,107040,110828,105667,121146,91138,96859,121152,95880],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042776"},{"annotations":[116564,60791],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009113"},{"annotations":[99723,75823,74376],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006164"},{"annotations":[95768,62794,68116,75391],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006166"},{"annotations":[81045,75298,76558,89427,74663,101041,89864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006086"},{"annotations":[110312,77592],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032265"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of a purine-containing compound, i.e. any compound that contains purine or a formal derivative thereof.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"biosynthetic process","termid":"GO:0009058"},{"relation_name":"is_a","term_name":"purine-containing compound metabolic 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id: PBO:0056882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MICOS10 pseudogene 2","termid":"PBO:0056882"}


id: MONDO:1012211
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"perosomus elumbis, non-human animal","termid":"MONDO:1011668"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"perosomus elumbis, sheep","secondary_identifiers":["OMIA:000789-9940"],"termid":"MONDO:1012211","xrefs":{"Monarch":{"xref_id":"1012211"}}}


id: GO:0007161
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The binding of a cell to the extracellular matrix via adhesion molecules that do not require the presence of calcium for the interaction.","definition_xrefs":["GOC:hb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-matrix adhesion","termid":"GO:0007160"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"calcium-independent cell-matrix adhesion","synonyms":[{"name":"calcium-independent cell adhesion molecule activity","type":"related"}],"termid":"GO:0007161"}


id: MONDO:0014180
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"epidermolysis bullosa simplex","termid":"MONDO:0017610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"epidermolysis bullosa simplex 3, localized or generalized intermediate, with BP230 deficiency","secondary_identifiers":["OMIM:615425","Orphanet:412181","UMLS:C3809470","GARD:17690","MEDGEN:815800"],"synonyms":[{"name":"DST-related epidermolysis bullosa simplex","type":"exact"},{"name":"EBS-AR BP230","type":"exact"},{"name":"EBSB2","type":"related"},{"name":"epidermolysis bullosa simplex 3, localised or generalised intermediate, with bp230 deficiency","type":"exact"},{"name":"epidermolysis bullosa simplex 3, localized or generalized intermediate, with bp230 deficiency","type":"exact"},{"name":"epidermolysis bullosa simplex due to BP230 deficiency","type":"exact"},{"name":"epidermolysis bullosa simplex, autosomal recessive 2","type":"related"},{"name":"epidermolysis bullosa simplex, autosomal recessive type 2","type":"exact"}],"termid":"MONDO:0014180","xrefs":{"Monarch":{"xref_id":"0014180"}}}


id: GO:0090035
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the frequency, rate, or extent of chaperone-mediated protein complex assembly. Chaperone-mediated protein complex assembly is the aggregation, arrangement and bonding together of a set of components to form a protein complex, mediated by chaperone molecules that do not form part of the finished complex.","definition_xrefs":["GOC:tb","GOC:BHF","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein-containing complex assembly","termid":"GO:0031334"},{"relation_name":"is_a","term_name":"regulation of chaperone-mediated protein complex assembly","termid":"GO:0090034"},{"relation_name":"positively_regulates","term_name":"chaperone-mediated protein complex assembly","termid":"GO:0051131"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"positively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"positively_regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"positive regulation of chaperone-mediated protein complex assembly","termid":"GO:0090035"}


id: PBO:0025550
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAJ domain protein Psi1","termid":"PBO:0025550"}


id: PR:Q10268
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mac1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane-anchored protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.04c","synonyms":[{"name":"Spom972h-mac1","type":"exact"}],"termid":"PR:Q10268"}


id: MONDO:0043101
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Hypothalamic dysfunction refers to a condition in which the hypothalamus is not working properly. The hypothalamus produces hormones that control body temperature, hunger, moods, release of hormones from many glands such as the pituitary gland, sex drive, sleep, and thirst. The signs and symptoms patients have vary depending on the hormones missing. A number of different causes including anorexia, bleeding, genetic disorder, tumors, and more have been linked to hypothalamic dysfunction. Treatment depends on the cause of the hypothalamic dysfunction.","definition_xrefs":["GARD:0002932"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypothalamic disorder","termid":"MONDO:0002150"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypothalamic dysfunction","secondary_identifiers":["MEDGEN:155833","SCTID:111568001","UMLS:C0751230"],"synonyms":[{"name":"hypothalamic dysfunction","type":"exact"},{"name":"hypothalamic syndrome","type":"exact"}],"termid":"MONDO:0043101","xrefs":{"Monarch":{"xref_id":"0043101"}}}


id: MONDO:0005654
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infection that is caused by the roundworm Ascaris lumbricoides, many cases of which remain asymptomatic. During the transient larval migratory phase, shortness of breath, fever, and eosinophilia can occur. Depending on the intestinal worm burden, a spectrum of gastrointestinal tract symptoms can occur.","definition_xrefs":["NCIT:C128392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Ascaridida infectious disease","termid":"MONDO:0005656"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ascariasis","secondary_identifiers":["ICD10WHO:B77","MESH:D001196","ICD9:127.0","MEDGEN:2087","CSP:1248-7284","DOID:456","EFO:0007154","ICD10CM:B77","UMLS:C0003950","SCTID:2435008","icd11.foundation:17842540"],"synonyms":[{"name":"Ascaris lumbricoides caused disease or disorder","type":"exact"},{"name":"Ascaris lumbricoides disease or disorder","type":"exact"},{"name":"Ascaris lumbricoides infection","type":"related"},{"name":"Ascaris lumbricoides infectious disease","type":"exact"},{"name":"ascariasis - roundworm","type":"exact"}],"termid":"MONDO:0005654","xrefs":{"Monarch":{"xref_id":"0005654"}}}


id: PBO:0067359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 457, pseudogene","termid":"PBO:0067359"}


id: GO:0061306
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The identification and annealing of complementary base pairs in single-strand DNA that contributes to double-strand break repair.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete DNA strand renaturation involved in double-strand break repair (obsolete GO:0061306)","termid":"GO:0061306"}


id: GO:0075303
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of frequency, rate or extent of basidiospore formation, a process in which a sexually produced fungal spore is formed on a basidium in the fungi basidiomycetes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of sexual sporulation resulting in formation of a cellular spore","termid":"GO:0043941"},{"relation_name":"is_a","term_name":"regulation of basidiospore formation","termid":"GO:0075302"},{"relation_name":"positively_regulates","term_name":"basidiospore formation","termid":"GO:0034295"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"}],"interesting_parent_ids":["GO:0008150","GO:0007049"],"is_obsolete":false,"name":"positive regulation of basidiospore formation","termid":"GO:0075303"}


id: FYPO:0003237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of splicing of RNA primary transcripts at sites that are not normally frequently used (or not spliced at all) is increased.","definition_xrefs":["PMID:24210919","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased RNA splicing, via spliceosome","termid":"FYPO:0002916"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0001985","FYPO:0000294","FYPO:0000002","FYPO:0005447"],"is_obsolete":false,"name":"increased RNA splicing at cryptic splice sites","synonyms":[{"name":"increased RNA splicing at cryptic splice sites during mitotic cell cycle","type":"related"},{"name":"increased RNA splicing at cryptic splice sites during vegetative growth","type":"exact"},{"name":"increased RNA splicing of cryptic introns","type":"exact"}],"termid":"FYPO:0003237"}


id: GO:0002345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process that takes place mainly in germinal center B cells in which a large number of mutations are generated in the heavy chain and light chain V-region genes and their immediately surrounding introns in order to increase antibody diversity and contribute to affinity maturation.","definition_xrefs":["GOC:jal"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B cell receptor editing","termid":"GO:0002452"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006310"}],"interesting_parent_ids":["GO:0006310","GO:0006259","GO:0010467","GO:0008150"],"is_obsolete":false,"name":"peripheral B cell receptor editing","synonyms":[{"name":"peripheral B lymphocyte receptor editing","type":"exact"},{"name":"peripheral B-cell receptor editing","type":"exact"},{"name":"peripheral B-lymphocyte receptor editing","type":"exact"}],"termid":"GO:0002345"}


id: PBO:0091302
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial hydrolase, N-terminal portion of Crd1 fusion protein","termid":"PBO:0091302"}


id: MONDO:0018287
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital disorder of glycosylation with epilepsy as a major feature (obsolete MONDO:0018287)","secondary_identifiers":["Orphanet:371071"],"synonyms":[{"name":"CDG with epilepsy as a major feature","type":"exact"}],"termid":"MONDO:0018287","xrefs":{"Monarch":{"xref_id":"0018287"}}}


id: PR:Q9Y7J2
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lam2 gene.","definition_xrefs":["UniProtKB:Q9Y7J2","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C1778.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1778.05c","synonyms":[{"name":"Spom972h-lam2","type":"exact"}],"termid":"PR:Q9Y7J2"}


id: GO:0001879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a stimulus from a yeast is received and converted into a molecular signal.","definition_xrefs":["PMID:14707091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to yeast","termid":"GO:0001878"},{"relation_name":"is_a","term_name":"detection of fungus","termid":"GO:0016046"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of yeast","termid":"GO:0001879"}


id: PBO:0031418
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_meiotic_recombination","termid":"PBO:0031418"}


id: PBO:0072906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"secretory carrier membrane protein 4","termid":"PBO:0072906"}


id: PATO:0002513
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of the bearer's having a slanting direction (neither perpendicular nor parallel) relative to another entity.","definition_xrefs":["PATOC:EJS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oblique to","termid":"PATO:0002513"}


id: PBO:0049169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GRB2 related adaptor protein like","termid":"PBO:0049169"}


id: PBO:0068197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 504","termid":"PBO:0068197"}


id: PBO:0109640
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"retinoic acid early transcript 1K (pseudogene)","termid":"PBO:0109640"}


id: PBO:0047220
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 225 member B","termid":"PBO:0047220"}


id: PBO:0048743
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glutamate-ammonia ligase pseudogene 5","termid":"PBO:0048743"}


id: RO:0003309
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"A relationship between an entity (e.g. a chemical, environmental exposure, or some form of genetic variation) and a condition (a phenotype or disease), where the presence of the entity worsens some or all aspects of the condition.","direct_ancestors":[{"relation_name":"is_a","term_name":"contributes_to_severity_of_condition","termid":"RO:0003305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exacerbates_condition","termid":"RO:0003309"}


id: GO:0006610
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of a ribosomal protein from the cytoplasm into the nucleus, across the nuclear membrane. At least some ribosomal proteins, including rpl12, uses the importin 11 pathway as a major route into the nucleus.","definition_xrefs":["GOC:ai","PMID:11809816"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein import into nucleus","termid":"GO:0006606"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0006913"}],"interesting_parent_ids":["GO:0051179","GO:0008150","GO:0006810","GO:0006913"],"is_obsolete":false,"name":"ribosomal protein import into nucleus","synonyms":[{"name":"ribosomal protein import into cell nucleus","type":"exact"},{"name":"ribosomal protein transport from cytoplasm to nucleus","type":"exact"},{"name":"ribosomal protein-nucleus import","type":"exact"}],"termid":"GO:0006610"}


id: GO:0102349
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: tetracosanoyl-CoA + NADP = trans-2-tetracosenoyl-CoA + NADPH + H+.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete trans-lignocero-2-enoyl-CoA reductase activity (obsolete GO:0102349)","termid":"GO:0102349"}


id: GO:1903530
data:
  {"annotated_genes":["SJAG_00661","SJAG_03763","SJAG_04509","SJAG_02366"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[102201],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045921"},{"annotations":[61918,89908,100407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0017157"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of secretion by cell.","definition_xrefs":["GOC:TermGenie","GOC:pm","PMID:12130530","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cellular process","termid":"GO:0050794"},{"relation_name":"is_a","term_name":"regulation of secretion","termid":"GO:0051046"},{"relation_name":"regulates","term_name":"secretion by cell","termid":"GO:0032940"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00661":null,"SJAG_02366":null,"SJAG_03763":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of secretion by cell","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"regulation of cellular secretion","type":"exact"}],"termid":"GO:1903530","terms_by_termid":{"GO:0017157":null,"GO:0045921":null}}


id: GO:0006690
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving icosanoids, any of a group of C20 polyunsaturated fatty acids.","definition_xrefs":["GOC:ma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxylic acid metabolic process","termid":"GO:0019752"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044281","GO:0008150"],"is_obsolete":false,"name":"icosanoid metabolic process","secondary_identifiers":["Reactome:R-HSA-211979"],"synonyms":[{"name":"eicosanoid metabolic process","type":"exact"},{"name":"eicosanoid metabolism","type":"exact"},{"name":"icosanoid metabolism","type":"exact"}],"termid":"GO:0006690"}


id: MONDO:0016642
data:
  {"annotated_genes":["SJAG_03131","SJAG_03576"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89302,89301],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011789"}]},"cv_name":"mondo","definition":"A generally slow growing tumor attached to the dura mater. It is composed of neoplastic meningothelial (arachnoidal) cells. It typically occurs in adults, often women and it has a wide range of histopathological appearances. Of the various subtypes, meningothelial, fibrous and transitional meningiomas are the most common. Most meningiomas are WHO grade I tumors, and some are WHO grade II or III tumors. Most subtypes share a common clinical behavior, although some subtypes are more likely to recur and follow a more aggressive clinical course. (Adapted from WHO)","definition_xrefs":["NCIT:C3230"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tumor of meninges","termid":"MONDO:0016743"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03131":null,"SJAG_03576":null},"genotype_count":0,"is_obsolete":false,"name":"meningioma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NANDO:2200094","MESH:D008579","NORD:1434","MEDGEN:7532","ONCOTREE:MNG","Orphanet:2495","UMLS:C0025286","icd11.foundation:672106711","HP:0002858","GARD:7015","DOID:3565","ICDO:9530/0","MedDRA:10027191","SCTID:302820008"],"synonyms":[{"name":"intracranial meningioma","type":"related"},{"name":"meningeal neoplasm","type":"related"},{"name":"meningioma","type":"exact"},{"name":"meningioma (disease)","type":"exact"},{"name":"meningothelial cell tumor","type":"related"},{"name":"meningothelial cell tumour","type":"related"},{"name":"primary meningeal tumor","type":"related"},{"name":"primary meningeal tumour","type":"related"},{"name":"supratentorial meningioma","type":"related"}],"termid":"MONDO:0016642","terms_by_termid":{"MONDO:0011789":null},"xrefs":{"Monarch":{"xref_id":"0016642"}}}


id: PBO:0046814
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coagulation factor XIII B chain","termid":"PBO:0046814"}


id: GO:0017198
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The acetylation of the N-terminal serine of proteins to form the derivative N-acetyl-L-serine.","definition_xrefs":["RESID:AA0051"],"gene_count":0,"genotype_count":0,"name":"obsolete N-terminal peptidyl-serine acetylation (obsolete GO:0017198)","termid":"GO:0017198"}


id: PBO:0016041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"M phase inducer tyrosine phosphatase Cdc25","termid":"PBO:0016041"}


id: FYPO_EXT:0000003
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"small fraction of cells (penetrance) or weak phenotype (severity)","definition_xrefs":["PomBase:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO severity extension","termid":"FYPO_EXT:1000001"},{"relation_name":"is_a","term_name":"FYPO penetrance extension","termid":"FYPO_EXT:1000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"low","termid":"FYPO_EXT:0000003"}


id: MONDO:0014158
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any nephronophthisis in which the cause of the disease is a mutation in the ANKS6 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephronophthisis","termid":"MONDO:0019005"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240","MONDO:0006025"],"is_obsolete":false,"name":"nephronophthisis 16","secondary_identifiers":["DOID:0111124","MEDGEN:815650","OMIM:615382","UMLS:C3809320","SCTID:444558002","GARD:18183"],"synonyms":[{"name":"ANKS6 nephronophthisis (disease)","type":"exact"},{"name":"NPHP16","type":"exact"},{"name":"autosomal recessive infantile NPHP","type":"related"},{"name":"autosomal recessive infantile nephronophthisis","type":"related"},{"name":"infantile nephronophthisis","type":"related"},{"name":"nephronophthisis (disease) caused by mutation in ANKS6","type":"exact"},{"name":"nephronophthisis 16","type":"exact"},{"name":"nephronophthisis type 16","type":"exact"}],"termid":"MONDO:0014158","xrefs":{"Monarch":{"xref_id":"0014158"}}}


id: PBO:0026910
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_septated_mononucleate_vegetative_cell","termid":"PBO:0026910"}


id: PBO:0061960
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily A member 20 pseudogene","termid":"PBO:0061960"}


id: PBO:0074317
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 6","termid":"PBO:0074317"}


id: PBO:0113405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA); PKA is a component of a signaling pathway that controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation; regulator of meiotic commitment","termid":"PBO:0113405"}


id: MONDO:0023539
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete MONDO:0023539 (obsolete MONDO:0023539)","termid":"MONDO:0023539","xrefs":{"Monarch":{"xref_id":"0023539"}}}


id: PBO:0074795
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 13","termid":"PBO:0074795"}


id: GO:0032590
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The portion of the plasma membrane surrounding a dendrite.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron projection membrane","termid":"GO:0032589"},{"relation_name":"part_of","term_name":"dendrite","termid":"GO:0030425"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005886"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005886"],"is_obsolete":false,"name":"dendrite membrane","termid":"GO:0032590"}


id: PBO:0057739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 1469","termid":"PBO:0057739"}


id: MOD:00681
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-lysine residue to a hydroxylated L-lysine.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydroxylated residue","termid":"MOD:00677"},{"relation_name":"is_a","term_name":"modified L-lysine residue","termid":"MOD:00912"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxylated lysine","synonyms":[{"name":"HyLys","type":"exact"}],"termid":"MOD:00681"}


id: MONDO:0004391
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A extraosseous chondrosarcoma that occurs in an adult.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete adult extraosseous chondrosarcoma (obsolete MONDO:0004391)","secondary_identifiers":["DOID:7902"],"synonyms":[{"name":"extraosseous chondrosarcoma of adults","type":"exact"}],"termid":"MONDO:0004391","xrefs":{"Monarch":{"xref_id":"0004391"}}}


id: PBO:0061896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"opsin 1, short wave sensitive","termid":"PBO:0061896"}


id: GO:0106025
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of onset of pupariation.","definition_xrefs":["GOC:hjd"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of multicellular organismal process","termid":"GO:0051240"},{"relation_name":"is_a","term_name":"regulation of pupariation","termid":"GO:0106023"},{"relation_name":"positively_regulates","term_name":"pupariation","termid":"GO:0035073"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of pupariation","termid":"GO:0106025"}


id: GO:0071952
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The modification process that results in the conversion of O-phosphoserine charged on a tRNA(Cys) to cysteinyl-tRNA.","definition_xrefs":["PMID:17351629","GOC:jsg","PMID:18559341"],"direct_ancestors":[{"relation_name":"is_a","term_name":"charged-tRNA amino acid modification","termid":"GO:0019988"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"conversion of O-phosphoseryl-tRNA to cysteinyl-tRNA","termid":"GO:0071952"}


id: GO:0006512
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The cyclical process by which one or more ubiquitin groups are added to (ubiquitination) and removed from (deubiquitination) a protein.","definition_xrefs":["PMID:11917093"],"gene_count":0,"genotype_count":0,"name":"obsolete ubiquitin cycle (obsolete GO:0006512)","synonyms":[{"name":"ubiquitin cycle","type":"exact"}],"termid":"GO:0006512"}


id: PBO:0084491
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Meiosis-specific protein; involved in normal synaptonemal complex formation and pairing between homologous chromosomes during meiosis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress","termid":"PBO:0084491"}


id: PBO:0109398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 25, pseudogene","termid":"PBO:0109398"}


id: PBO:0086235
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that interacts with the CCT complex to stimulate actin folding; has similarity to phosducins; null mutant lethality is complemented by mouse phosducin-like protein MgcPhLP; CCT is short for chaperonin containing TCP-1; essential gene","termid":"PBO:0086235"}


id: GO:0060088
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of a stereocilium. A stereocilium is an actin-based protrusion from the apical surface of auditory hair cells.","definition_xrefs":["GOC:dph","PMID:10978835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inner ear receptor cell stereocilium organization","termid":"GO:0060122"},{"relation_name":"part_of","term_name":"auditory receptor cell morphogenesis","termid":"GO:0002093"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"auditory receptor cell stereocilium organization","synonyms":[{"name":"auditory receptor cell stereocilium organisation","type":"exact"},{"name":"auditory receptor cell stereocilium organization and biogenesis","type":"related"}],"termid":"GO:0060088"}


id: MONDO:0031040
data:
  {"annotated_genes":["SJAG_05194"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87852],"is_not":false,"summary":null,"term":"MONDO:0031040"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"progressive familial intrahepatic cholestasis","termid":"MONDO:0015762"}],"gene_count":1,"genes_by_uniquename":{"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005066","MONDO:0002515"],"is_obsolete":false,"name":"cholestasis, progressive familial intrahepatic, 12","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1824084","OMIM:620010","UMLS:C5774311"],"synonyms":[{"name":"PFIC12","type":"exact"},{"name":"cholestasis, isolated low-ggt","type":"exact"},{"name":"cholestasis, progressive familial intrahepatic, 12","type":"exact"}],"termid":"MONDO:0031040","terms_by_termid":{"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0031040"}}}


id: MONDO:0013736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete myopathy, centronuclear, 3 (obsolete MONDO:0013736)","termid":"MONDO:0013736","xrefs":{"Monarch":{"xref_id":"0013736"}}}


id: PBO:0060678
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NADPH dependent diflavin oxidoreductase 1","termid":"PBO:0060678"}


id: PBO:0065452
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase, 6 pseudogene 3","termid":"PBO:0065452"}


id: MONDO:0004359
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A disorder characterized by the presence of one or more nonbizarre delusions that persist for at least 1 month; the delusion(s) are not due to schizophrenia or a mood disorder, and do not impair psychosocial functioning apart from the ramifications of the delusion(s).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"psychotic disorder","termid":"MONDO:0005485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002039"}],"interesting_parent_ids":["MONDO:0002039"],"is_obsolete":false,"name":"delusional disorder","secondary_identifiers":["DOID:778","ICD10WHO:F22.0","SCTID:48500005","UMLS:C0011251","icd11.foundation:1974996783","ICD9:297.1","MEDGEN:8276","NCIT:C94379","MESH:D012563"],"termid":"MONDO:0004359","xrefs":{"Monarch":{"xref_id":"0004359"}}}


id: PBO:0039917
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Rho guanine nucleotide exchange factor 17","termid":"PBO:0039917"}


id: GO:0043715
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-diketo-5-methylthiopentyl-1-phosphate = H+ + 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate. 2,3-diketo-5-methylthiopentyl-1-phosphate is also known as DK-MTP-1-P, and 2-hydroxy 3-keto-5-methylthiopentenyl-1-phosphate as HK-MTPenyl-1-P.","definition_xrefs":["MetaCyc:R82-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intramolecular oxidoreductase activity, interconverting keto- and enol-groups","termid":"GO:0016862"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016853"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016853"],"is_obsolete":false,"name":"2,3-diketo-5-methylthiopentyl-1-phosphate enolase activity","secondary_identifiers":["RHEA:18769","EC:5.3.2.5"],"synonyms":[{"name":"DK-MTP-1-P enolase activity","type":"exact"},{"name":"E-1","type":"related"},{"name":"MasA","type":"related"},{"name":"mtnW","type":"related"}],"termid":"GO:0043715"}


id: GO:0086084
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a protein or protein complex that results in the connection of a Purkinje myocyte with an ventricular cardiac muscle cell and contributes to the communication between the two cells.","definition_xrefs":["GOC:mtg_cardiac_conduct_nov11","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein binding involved in heterotypic cell-cell adhesion","termid":"GO:0086080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0098631"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0098631","GO:0005488","GO:0005515","GO:0003674"],"is_obsolete":false,"name":"cell adhesive protein binding involved in Purkinje myocyte-ventricular cardiac muscle cell communication","termid":"GO:0086084"}


id: PBO:0047711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flavin containing dimethylaniline monoxygenase 2","termid":"PBO:0047711"}


id: FYPO:0004199
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the occurrence of protein degradation is increased during mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased protein degradation during vegetative growth","termid":"FYPO:0000847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002274","FYPO:0001320","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"increased protein degradation during mitosis","synonyms":[{"name":"increased protein breakdown during mitosis","type":"exact"},{"name":"increased protein catabolic process during mitosis","type":"exact"},{"name":"increased protein catabolism during mitosis","type":"exact"},{"name":"increased protein degradation during mitosis during mitotic cell cycle","type":"related"},{"name":"increased protein degradation during mitosis during vegetative growth","type":"exact"},{"name":"increased protein degradation during mitotic M phase","type":"related"},{"name":"increased protein degradation during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004199"}


id: GO:0072489
data:
  {"annotated_genes":["SJAG_04731"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101265],"is_not":false,"summary":null,"term":"GO:0072489"}]},"cv_name":"biological_process","definition":"The process in which methylammonium is transported across a membrane.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methylammonium transport","termid":"GO:0015843"},{"relation_name":"is_a","term_name":"transmembrane transport","termid":"GO:0055085"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04731":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"methylammonium transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"methylammonium membrane transport","type":"exact"}],"termid":"GO:0072489","terms_by_termid":{"GO:0072489":null}}


id: FYECO:0000429
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"Experiments were performed in rich medium where the medium contained trace amounts of glucose (<0.1%).","definition_xrefs":["PomBase:mlr"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping defined medium","termid":"FYECO:0000013"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"YE with trace glucose","synonyms":[{"name":"rich medium with trace glucose","type":"exact"},{"name":"very low glucose YE","type":"exact"}],"termid":"FYECO:0000429"}


id: PBO:0063654
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphoglycerate mutase 1 pseudogene 11","termid":"PBO:0063654"}


id: GO:0046881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the regulated release of follicle-stimulating hormone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of gonadotropin secretion","termid":"GO:0032278"},{"relation_name":"is_a","term_name":"regulation of follicle-stimulating hormone secretion","termid":"GO:0046880"},{"relation_name":"positively_regulates","term_name":"follicle-stimulating hormone secretion","termid":"GO:0046884"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of follicle-stimulating hormone secretion","synonyms":[{"name":"activation of follicle-stimulating hormone secretion","type":"narrow"},{"name":"positive regulation of follicle stimulating hormone secretion","type":"exact"},{"name":"stimulation of follicle-stimulating hormone secretion","type":"narrow"},{"name":"up regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"up-regulation of follicle-stimulating hormone secretion","type":"exact"},{"name":"upregulation of follicle-stimulating hormone secretion","type":"exact"}],"termid":"GO:0046881"}


id: MOD:01453
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts a source amino acid residue to L-glutamate 5-methyl ester.","definition_xrefs":["RESID:AA0072"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-methylated residue","termid":"MOD:00393"},{"relation_name":"is_a","term_name":"monomethylated residue","termid":"MOD:00599"},{"relation_name":"is_a","term_name":"methylated glutamic acid","termid":"MOD:00713"},{"relation_name":"is_a","term_name":"modified residue that can arise from different natural residues","termid":"MOD:00859"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00427"}],"interesting_parent_ids":["MOD:00427"],"is_obsolete":false,"name":"L-glutamic acid 5-methyl ester","synonyms":[{"name":"(2S)-2-amino-5-methoxy-5-oxopentanoic acid","type":"exact"},{"name":"(5)-methyl L-hydrogen glutamate","type":"exact"},{"name":"2-aminopentanedioic acid 5-methyl ester","type":"exact"},{"name":"5-methyl L-2-aminoglutarate","type":"exact"},{"name":"5-methyl L-glutamate","type":"exact"},{"name":"5-methyl esterified L-glutamic acid","type":"exact"},{"name":"L-glutamic acid 5-methyl ester","type":"exact"},{"name":"O-methyl Glutamyl","type":"exact"},{"name":"O5MeGlu","type":"exact"},{"name":"glutamic acid 5-methyl ester","type":"exact"},{"name":"glutamic acid gamma-methyl ester","type":"exact"}],"termid":"MOD:01453"}


id: GO:0021841
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The creation and reception of signals that result in the movement of interneurons toward the signal, where this process is involved in migration from the subpallium to the cortex.","definition_xrefs":["GO_REF:0000021","GOC:cls","GOC:dph","GOC:jid","GOC:dgh","PMID:12626695"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive chemotaxis","termid":"GO:0050918"},{"relation_name":"part_of","term_name":"directional guidance of interneurons involved in migration from the subpallium to the cortex","termid":"GO:0021840"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"chemoattraction involved in interneuron migration from the subpallium to the cortex","synonyms":[{"name":"positive chemotaxis involved in interneuron migration from the subpallium to the cortex","type":"exact"}],"termid":"GO:0021841"}


id: FYPO:0007434
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which cells do not change the length at which they divide to the same extent as normal upon shifting from a good nitrogen source to a poor nitrogen source. Normally, cells divide at a smaller size after shifting to a poor nitrogen source; in mutants the size difference is less pronounced between media with good versus poor nitrogen sources. Good (or rich) nitrogen sources are distinguished from poor sources based on how readily nitrogen is assimilated into cellular metabolism. In microorganisms, good nitrogen sources generally support higher cell population growth rates than poor sources. In fission yeast, cells divide at a smaller size when grown on a poor nitrogen source than in nitrogen-rich media; proline is commonly used as a poor nitrogen source.","definition_xrefs":["PMID:10640599","PMID:25639242","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle regulation upon nitrogen source shift","termid":"FYPO:0005206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000631","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"attenuated change in cell size at division upon shift to poor nitrogen source","synonyms":[{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during mitotic cell cycle","type":"related"},{"name":"attenuated change in cell size at division upon shift to poor nitrogen source during vegetative growth","type":"exact"},{"name":"decreased change in cell length at division after shift to poor nitrogen source","type":"exact"}],"termid":"FYPO:0007434"}


id: PBO:0072564
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RRAS2 pseudogene 2","termid":"PBO:0072564"}


id: GO:0098862
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A cell part consisting of multiple, closely packed actin-based cell projections.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"cluster of actin-based cell projections","termid":"GO:0098862"}


id: MONDO:0004496
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Myocarditis is a condition that is characterized by inflammation of the heart muscle (myocardium). Some affected people have no noticeable symptoms of the condition. When present, signs and symptoms may include chest pain, abnormal heartbeat, shortness of breath, fatigue, signs of infection (i.e. fever, headache, sore throat, diarrhea), and leg swelling. Myocarditis can be caused by a variety of factors including infections (viral, bacterial, parasitic, and fungal), allergic reactions to certain medications, and exposure to certain chemicals. It can also be associated with other inflammatory conditions such as lupus, Wegener's granulomatosis, giant cell arteritis and Takayasu's arteritis. Most cases occur sporadically in people with no family history of the condition. Treatment aims to address the underlying cause of the condition. Medications and rarely, a heart transplant may be needed if the heart muscle becomes weak.","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"extrinsic cardiomyopathy","termid":"MONDO:0002824"},{"relation_name":"is_a","term_name":"intrinsic cardiomyopathy","termid":"MONDO:0000591"},{"relation_name":"is_a","term_name":"inflammation of heart layer","termid":"MONDO:0024636"},{"relation_name":"is_a","term_name":"myocardial disorder","termid":"MONDO:0024643"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"myocarditis","secondary_identifiers":["icd11.foundation:1018829714","DOID:820","NCIT:C34831","NORD:1882","UMLS:C0027059","GARD:7137","ICD10CM:I40","MEDGEN:44553","MESH:D009205","ICD9:429.0","SCTID:50920009","EFO:0009609"],"synonyms":[{"name":"inflammation of myocardium","type":"exact"},{"name":"myocardial inflammation","type":"exact"},{"name":"myocardial inflammation (finding)","type":"exact"},{"name":"myocardium inflammation","type":"exact"}],"termid":"MONDO:0004496","xrefs":{"Monarch":{"xref_id":"0004496"}}}


id: FYPO:0002157
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of 1,3-beta-D-glucan synthase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal glucosyltransferase activity","termid":"FYPO:0001086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000652","FYPO:0000257"],"is_obsolete":false,"name":"normal 1,3-beta-D-glucan synthase activity","termid":"FYPO:0002157"}


id: PBO:0032697
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_rate_of_mitotic_spindle_elongation_during_anaphase_B","termid":"PBO:0032697"}


id: GO:0010511
data:
  {"annotated_genes":["SJAG_00053","SJAG_02613","SJAG_03170"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[92418,60013],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902647"},{"annotations":[119598],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902648"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways resulting in the formation of phosphatidylinositol.","definition_xrefs":["GOC:tb","GOC:vw","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of phospholipid biosynthetic process","termid":"GO:0071071"},{"relation_name":"regulates","term_name":"phosphatidylinositol biosynthetic process","termid":"GO:0006661"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00053":null,"SJAG_02613":null,"SJAG_03170":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"regulation of phosphatidylinositol biosynthetic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000117":null},"termid":"GO:0010511","terms_by_termid":{"GO:1902647":null,"GO:1902648":null}}


id: PBO:0089876
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UNC-50 family protein, implicated in vesicle-mediated transport","termid":"PBO:0089876"}


id: MONDO:1011627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"myoclonus epilepsy of Lafora, non-human animal","secondary_identifiers":["OMIA:000690"],"termid":"MONDO:1011627","xrefs":{"Monarch":{"xref_id":"1011627"}}}


id: PBO:0063504
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podoplanin","termid":"PBO:0063504"}


id: PBO:0003085
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complements S. cerevisiae cdc13-1","termid":"PBO:0003085"}


id: MONDO:0004949
data:
  {"annotated_genes":["SJAG_02527"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89337],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0009693"}]},"cv_name":"mondo","definition":"A neoplasm of follicle center B cells which has at least a partial follicular pattern. Follicular lymphomas comprise about 35% of adult non-Hodgkin lymphomas in the U.S. and 22% worldwide. Most patients have widespread disease at diagnosis. Morphologically, follicular lymphomas are classified as Grade 1, Grade 2, and Grade 3, depending on the percentage of the large lymphocytes present. The vast majority of cases (70-95%) express the BCL-2 rearrangement [t(14;18)]. Histological grade correlates with prognosis. Grades 1 and 2 follicular lymphomas are indolent and grade 3 is more aggressive (adapted from WHO, 2001).","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"B-cell neoplasm","termid":"MONDO:0004095"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"neoplasm of mature B-cells","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["NCIT:C3457","MEDGEN:235305","ONCOTREE:MBN","ICD9:202.0","SCTID:269476000","EFO:0000096","NCIT:C27910","DOID:706","UMLS:C1334633"],"synonyms":[{"name":"mature B-cell lymphocytic neoplasm","type":"exact"},{"name":"mature B-cell neoplasm","type":"exact"},{"name":"mature B-cell neoplasms","type":"related"}],"termid":"MONDO:0004949","terms_by_termid":{"MONDO:0009693":null},"xrefs":{"Monarch":{"xref_id":"0004949"}}}


id: FYPO:0008325
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular phenotype observed in the vegetative growth phase of the life cycle in which the total cytosolic ribosome content (monosomes + polysomes) in a cell is higher than normal.","definition_xrefs":["PomBase:pc","PMID:39358553"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered level of macromolecular complex during vegetative growth","termid":"FYPO:0003684"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased cytosolic ribosome content","termid":"FYPO:0008325"}


id: MONDO:0001466
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"superficial keratitis","termid":"MONDO:0001465"},{"relation_name":"is_a","term_name":"keratoconjunctivitis","termid":"MONDO:0004768"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"punctate epithelial keratoconjunctivitis","secondary_identifiers":["MEDGEN:736733","UMLS:C1562761","DOID:12197","ICD9:370.21","SCTID:416069001"],"synonyms":[{"name":"Thygeson superficial punctate keratitis","type":"exact"},{"name":"Thygeson's superficial punctate keratitis","type":"exact"},{"name":"punctate keratitis","type":"exact"}],"termid":"MONDO:0001466","xrefs":{"Monarch":{"xref_id":"0001466"}}}


id: FYPO:0005207
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular response phenotype observed in the vegetative growth phase of the life cycle in which the regulation of the mitotic cell cycle is normal (i.e. indistinguishable from wild type) when cells are shifted from one nitrogen source to another. Normally, cell division is delayed upon shifting from a poor to a rich nitrogen source, and accelerated upon shifting from a rich to a poor nitrogen source.","definition_xrefs":["PomBase:mah","PMID:872891","PMID:21965528","PMID:689088"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal regulation of mitotic cell cycle","termid":"FYPO:0001928"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal mitotic cell cycle regulation upon nitrogen source shift","synonyms":[{"name":"normal cell cycle regulation upon nitrogen source shift","type":"exact"},{"name":"normal cell cycle regulation upon nitrogen source shift during mitotic cell cycle","type":"exact"},{"name":"normal mitotic cell cycle regulation during cellular response to nitrogen source shift","type":"exact"},{"name":"normal mitotic cell cycle regulation upon nitrogen source shift during vegetative growth","type":"exact"}],"termid":"FYPO:0005207"}


id: GO:0052191
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process in which an organism activates, maintains or increases the frequency, rate or extent of phagocytosis, the engulfing by phagocytes of external particulate material, in the host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation by symbiont of host phagocytosis (obsolete GO:0052191)","synonyms":[{"name":"activation by symbiont of host phagocytosis","type":"narrow"},{"name":"stimulation by symbiont of host phagocytosis","type":"narrow"},{"name":"up regulation by symbiont of host phagocytosis","type":"exact"},{"name":"up-regulation by symbiont of host phagocytosis","type":"exact"},{"name":"upregulation by symbiont of host phagocytosis","type":"exact"}],"termid":"GO:0052191"}


id: PBO:0043753
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"COX7C pseudogene 1","termid":"PBO:0043753"}


id: GO:0043510
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A nonsteroidal regulator, composed of two covalently linked inhibin beta-B subunits (sometimes known as activin beta-B or activin/inhibin beta-B).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"activin complex","termid":"GO:0048180"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005576"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005576","GO:0005575","GO:0032991"],"is_obsolete":false,"name":"activin B complex","secondary_identifiers":["GO:0048182"],"termid":"GO:0043510"}


id: GO:0034766
data:
  {"annotated_genes":["SJAG_00296","SJAG_03631"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[93227,115419],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905949"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the directed movement of ions from one side of a membrane to the other.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of monoatomic ion transmembrane transport","termid":"GO:0034765"},{"relation_name":"is_a","term_name":"negative regulation of monoatomic ion transport","termid":"GO:0043271"},{"relation_name":"negatively_regulates","term_name":"monoatomic ion transmembrane transport","termid":"GO:0034220"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00296":null,"SJAG_03631":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"negatively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0008150"],"is_obsolete":false,"name":"negative regulation of monoatomic ion transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of transmembrane ion transport","type":"exact"},{"name":"down-regulation of transmembrane ion transport","type":"exact"},{"name":"downregulation of transmembrane ion transport","type":"exact"},{"name":"inhibition of transmembrane ion transport","type":"narrow"},{"name":"negative regulation of ion membrane transport","type":"exact"},{"name":"negative regulation of ion transmembrane transport","type":"broad"},{"name":"negative regulation of transmembrane ion transport","type":"exact"}],"termid":"GO:0034766","terms_by_termid":{"GO:1905949":null}}


id: GO:1903065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any protein localization to cell tip that is involved in positive regulation of establishment of cell polarity regulating cell shape.","definition_xrefs":["GO_REF:0000060","GOC:TermGenie","PMID:24554432"],"gene_count":0,"genotype_count":0,"name":"obsolete protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape (obsolete GO:1903065)","synonyms":[{"name":"protein localisation to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"},{"name":"protein localization to cell tip involved in positive regulation of establishment of cell polarity regulating cell shape","type":"exact"}],"termid":"GO:1903065"}


id: MONDO:0014112
data:
  {"annotated_genes":["SJAG_03453"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[86986],"is_not":false,"summary":null,"term":"MONDO:0014112"}]},"cv_name":"mondo","definition":"Any cardiofaciocutaneous syndrome in which the cause of the disease is a mutation in the KRAS gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiofaciocutaneous syndrome","termid":"MONDO:0015280"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03453":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005267","MONDO:0005093"],"is_obsolete":false,"name":"cardiofaciocutaneous syndrome 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:615278","DOID:0111461","MEDGEN:815335","UMLS:C3809005","GARD:15935"],"synonyms":[{"name":"CFC2","type":"related"},{"name":"KRAS cardiofaciocutaneous syndrome","type":"exact"},{"name":"cardiofaciocutaneous syndrome 2","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in KRAS","type":"exact"},{"name":"cardiofaciocutaneous syndrome caused by mutation in kras","type":"exact"},{"name":"cardiofaciocutaneous syndrome type 2","type":"exact"},{"name":"kras cardiofaciocutaneous syndrome","type":"exact"}],"termid":"MONDO:0014112","terms_by_termid":{"MONDO:0014112":null},"xrefs":{"Monarch":{"xref_id":"0014112"}}}


id: PBO:0004392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homoserine dehydrogenase (predicted)","termid":"PBO:0004392"}


id: GO:0002679
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phase of elevated metabolic activity, during which oxygen consumption increases made as part of a defense response ; this leads to the production, by an NADH dependent system, of hydrogen peroxide (H2O2), superoxide anions and hydroxyl radicals.","definition_xrefs":["ISBN:0781735149","GOC:add","PMID:12789499"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune effector process","termid":"GO:0002252"},{"relation_name":"is_a","term_name":"respiratory burst","termid":"GO:0045730"},{"relation_name":"part_of","term_name":"defense response","termid":"GO:0006952"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"respiratory burst involved in defense response","termid":"GO:0002679"}


id: GO:0051450
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The multiplication or reproduction of myoblasts, resulting in the expansion of a myoblast cell population. A myoblast is a mononucleate cell type that, by fusion with other myoblasts, gives rise to the myotubes that eventually develop into skeletal muscle fibers.","definition_xrefs":["GOC:ai","CL:0000056","GOC:mtg_muscle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population proliferation","termid":"GO:0008283"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"myoblast proliferation","termid":"GO:0051450"}


id: MONDO:0001528
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A primary or metastatic malignant neoplasm involving the vulva.","definition_xrefs":["NCIT:C7502"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive organ cancer","termid":"MONDO:0001416"},{"relation_name":"is_a","term_name":"vulvar neoplasm","termid":"MONDO:0021049"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"vulva cancer","secondary_identifiers":["MESH:D014846","ICD10CM:C51","SCTID:363367000","DOID:1245","UMLS:C0375071","MEDGEN:91196","ICD9:184.4"],"synonyms":[{"name":"Ca vulva","type":"exact"},{"name":"cancer of mammalian vulva","type":"exact"},{"name":"malignant mammalian vulva neoplasm","type":"exact"},{"name":"malignant neoplasm of mammalian vulva","type":"exact"},{"name":"malignant neoplasm of the vulva","type":"exact"},{"name":"malignant neoplasm of vulva","type":"exact"},{"name":"malignant neoplasm of vulva unspecified","type":"exact"},{"name":"malignant neoplasm of vulva, unspecified","type":"exact"},{"name":"malignant tumor of the vulva","type":"exact"},{"name":"malignant tumor of vulva","type":"exact"},{"name":"malignant tumour of the vulva","type":"exact"},{"name":"malignant tumour of vulva","type":"exact"},{"name":"malignant vulva neoplasm","type":"exact"},{"name":"malignant vulva tumor","type":"exact"},{"name":"malignant vulva tumour","type":"exact"},{"name":"malignant vulvar neoplasm","type":"exact"},{"name":"malignant vulvar tumor","type":"exact"},{"name":"malignant vulvar tumour","type":"exact"},{"name":"mammalian vulva cancer","type":"exact"},{"name":"neoplasm of vulva","type":"broad"},{"name":"vulval cancer","type":"exact"},{"name":"vulval neoplasm","type":"broad"},{"name":"vulvar cancer","type":"exact"},{"name":"vulvar tumour","type":"broad"}],"termid":"MONDO:0001528","xrefs":{"Monarch":{"xref_id":"0001528"}}}


id: PBO:0061244
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NOP protein chaperone 1","termid":"PBO:0061244"}


id: PBO:0070085
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 42, pseudogene","termid":"PBO:0070085"}


id: GO:0034271
data:
  {"annotated_genes":["SJAG_00114","SJAG_02699","SJAG_04552","SJAG_04860","SJAG_01876"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[73516,78721,79235,96635,113573],"is_not":false,"summary":null,"term":"GO:0034271"}]},"cv_name":"cellular_component","definition":"A class III phosphatidylinositol 3-kinase complex that is involved in autophagy. In budding yeast, this complex consists of Vps30p, Vps34p, Apg14p and Vps15p.","definition_xrefs":["PMID:16421251","GOC:ha","PMID:11157979","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol 3-kinase complex, class III","termid":"GO:0035032"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00114":null,"SJAG_01876":null,"SJAG_02699":null,"SJAG_04552":null,"SJAG_04860":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"phosphatidylinositol 3-kinase complex, class III, type I","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"PtdIns-3-kinase complex I","type":"related"},{"name":"autophagy-specific phosphatidylinositol 3-kinase (PtdIns3K) complex","type":"exact"},{"name":"phosphatidylinositol 3-kinase complex I","type":"related"}],"termid":"GO:0034271","terms_by_termid":{"GO:0034271":null}}


id: PBO:0086477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative mitochondrial protein of unknown function; the authentic, non-tagged protein is detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0086477"}


id: GO:1990845
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated production of heat in response to short term environmental changes, such as stress, diet or reduced temperature.","definition_xrefs":["PMID:20363363","PMID:17260010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive thermogenesis","secondary_identifiers":["Reactome:R-HSA-166187"],"termid":"GO:1990845"}


id: GO:0035858
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The cell fate determination process in which a cell becomes capable of differentiating autonomously into an eosinophil cell regardless of its environment; upon determination, the cell fate cannot be reversed.","definition_xrefs":["CL:0000771","GOC:BHF","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate determination","termid":"GO:0001709"},{"relation_name":"part_of","term_name":"eosinophil fate commitment","termid":"GO:0035854"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"eosinophil fate determination","synonyms":[{"name":"eosinophil cell fate determination","type":"exact"}],"termid":"GO:0035858"}


id: PBO:0024804
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-enables_activity_in","termid":"PBO:0024804"}


id: GO:0018012
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The trimethylation of the N-terminal alanine of proteins to form the derivative peptidyl-N,N,N-trimethyl-L-alanine.","definition_xrefs":["RESID:AA0062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N-terminal peptidyl-alanine methylation","termid":"GO:0018011"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-terminal peptidyl-alanine trimethylation","termid":"GO:0018012"}


id: PBO:0080773
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XKR4 antisense RNA 1","termid":"PBO:0080773"}


id: GO:1902799
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of phosphodiesterase I activity.","definition_xrefs":["GO_REF:0000059","PMID:24559510","GOC:TermGenie"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of phosphodiesterase I activity (obsolete GO:1902799)","synonyms":[{"name":"regulation of 5' nucleotide phosphodiesterase/alkaline phosphodiesterase I activity","type":"exact"},{"name":"regulation of 5'-NPDase activity","type":"related"},{"name":"regulation of 5'-PDE activity","type":"related"},{"name":"regulation of 5'-PDase activity","type":"related"},{"name":"regulation of 5'-exonuclease activity","type":"related"},{"name":"regulation of 5'-nucleotide phosphodiesterase activity","type":"related"},{"name":"regulation of 5'-phosphodiesterase activity","type":"related"},{"name":"regulation of 5'NPDE activity","type":"related"},{"name":"regulation of PDE I activity","type":"exact"},{"name":"regulation of alkaline phosphodiesterase activity","type":"related"},{"name":"regulation of exonuclease I activity","type":"related"},{"name":"regulation of nucleotide pyrophosphatase/phosphodiesterase I activity","type":"exact"},{"name":"regulation of oligonucleate 5'-nucleotidohydrolase activity","type":"exact"},{"name":"regulation of orthophosphoric diester phosphohydrolase activity","type":"exact"},{"name":"regulation of phosphodiesterase activity","type":"broad"}],"termid":"GO:1902799"}


id: GO:0099008
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The entry of a symbiont into the cytoplasm of a host cell, following fusion with the outer membrane, via permeabilization of the plasma (inner) membrane. This process mediates the entry of some non-enveloped viruses into prokaryotic cells. In the case of some double stranded RNA viruses of prokaryotes this occurs via interaction of a membrane-interacting component of the capsid, leading to depolarization and permeabilization of the plasma membrane.","definition_xrefs":["PMID:20427561","PMID:15795287"],"direct_ancestors":[{"relation_name":"is_a","term_name":"symbiont entry into host cell via permeabilization of host membrane","termid":"GO:0140267"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"symbiont entry into host cell via permeabilization of inner membrane","synonyms":[{"name":"viral entry via permeabilization of inner membrane","type":"narrow"}],"termid":"GO:0099008"}


id: FYPO:0006449
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the rate, or speed, of histone H3 acetylation is lower extent than normal.","definition_xrefs":["PMID:26401015","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3 acetylation during vegetative growth","termid":"FYPO:0002361"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0002494","FYPO:0001985","FYPO:0001320","FYPO:0002274","FYPO:0005447"],"is_obsolete":false,"name":"decreased rate of histone H3 acetylation during vegetative growth","synonyms":[{"name":"decreased rate of histone H3 acetylation during mitotic cell cycle","type":"related"},{"name":"reduced rate of histone H3 acetylation during vegetative growth","type":"exact"}],"termid":"FYPO:0006449"}


id: GO:0034818
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: androsta-1,4-diene-3,17-dione + reduced ferredoxin + O2 = 3-hydroxy-9,10-secoandrosta-1,3,5(10)-triene-9,17-dione + H2O + oxidized ferredoxin.","definition_xrefs":["UM-BBD_reactionID:r1149"],"gene_count":0,"genotype_count":0,"name":"obsolete ADD 9alpha-hydroxylase activity (obsolete GO:0034818)","termid":"GO:0034818"}


id: MONDO:0010164
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Schinzel phocomelia syndrome, also called limb/pelvis hypoplasia/aplasia syndrome, is characterized by skeletal malformations affecting the ulnae, pelvic bones, fibulae and femora. As the phenotype is similar to that described in the malformation syndrome known as Al-Awadi/Raas-Rothschild syndrome, they are thought to be the same disorder.","definition_xrefs":["Orphanet:2879"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"},{"relation_name":"is_a","term_name":"non-syndromic limb reduction defect","termid":"MONDO:0019713"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"phocomelia, Schinzel type","secondary_identifiers":["MEDGEN:336388","GARD:9212","icd11.foundation:1732271544","SCTID:715522000","MESH:C535612","DOID:0112181","UMLS:C1848651","OMIM:276820"],"synonyms":[{"name":"AARRS","type":"related"},{"name":"Al Awadi Teebi Farag syndrome","type":"related"},{"name":"Al Awadi-Raas-Rothschild syndrome","type":"exact"},{"name":"Al-Awadi-Raas-Rothschild syndrome","type":"related"},{"name":"Al-Awadi/Raas-Rothschild syndrome","type":"related"},{"name":"Al-Awadi/Raas-Rothschild/Schinzel phocomelia syndrome","type":"related"},{"name":"Schinzel phocomelia syndrome","type":"related"},{"name":"Teebi Naguib Al Awadi syndrome","type":"related"},{"name":"absence of ulna and fibula with severe limb deficiency","type":"related"},{"name":"aplasia/hypoplasia of limbs and pelvis","type":"exact"},{"name":"congenital absence of ulna and fibula","type":"exact"},{"name":"limb/pelvis-hypoplasia/aplasia syndrome","type":"related"},{"name":"profound limb deficiency, thoracic dystrophy, unusual facies, and normal intelligence","type":"related"},{"name":"severe limb deficit","type":"exact"},{"name":"ulna and fibula absence of with severe limb deficiency","type":"related"},{"name":"ulna and fibula, absence of, with severe limb deficiency","type":"related"}],"termid":"MONDO:0010164","xrefs":{"Monarch":{"xref_id":"0010164"}}}


id: GO:0120514
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-hydro-2'-hydroxy-beta-oxodihydrochalcone + UDP-alpha-D-glucose = a 3'-(beta-D-glucopyranosyl)-2'-hydroxy-beta-oxodihydrochalcone + H+ + UDP.","definition_xrefs":["RHEA:51504"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0016757","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"2-hydroxyflavanone C-glucosyltransferase activity","secondary_identifiers":["EC:2.4.1.360","MetaCyc:RXN-18732"],"termid":"GO:0120514"}


id: MONDO:0850095
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"aortic disorder","termid":"MONDO:0005561"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-linked severe syndromic thoracic aortic aneurysm and dissection","secondary_identifiers":["GARD:22490","Orphanet:622925"],"termid":"MONDO:0850095","xrefs":{"Monarch":{"xref_id":"0850095"}}}


id: PBO:0053153
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lactate dehydrogenase B pseudogene 2","termid":"PBO:0053153"}


id: GO:0045764
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of the chemical reactions and pathways involving amino acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of amino acid metabolic process","termid":"GO:0006521"},{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"positively_regulates","term_name":"amino acid metabolic process","termid":"GO:0006520"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006520"},{"rel_name":"positively_regulates","termid":"GO:0006520"}],"interesting_parent_ids":["GO:0008150","GO:0006520"],"is_obsolete":false,"name":"positive regulation of amino acid metabolic process","synonyms":[{"name":"activation of amino acid metabolic process","type":"narrow"},{"name":"positive regulation of amino acid metabolism","type":"exact"},{"name":"positive regulation of cellular amino acid metabolic process","type":"exact"},{"name":"stimulation of amino acid metabolic process","type":"narrow"},{"name":"up regulation of amino acid metabolic process","type":"exact"},{"name":"up-regulation of amino acid metabolic process","type":"exact"},{"name":"upregulation of amino acid metabolic process","type":"exact"}],"termid":"GO:0045764"}


id: MONDO:0002789
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A term that refers to vascular neoplasms with a prominent hemangiopericytic growth pattern.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pericytic neoplasm","termid":"MONDO:0002604"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangiopericytic tumor","secondary_identifiers":["DOID:3850","NCIT:C7076","UMLS:C0476144","MEDGEN:99196"],"synonyms":[{"name":"hemangiopericytic neoplasm","type":"exact"}],"termid":"MONDO:0002789","xrefs":{"Monarch":{"xref_id":"0002789"}}}


id: PBO:0058586
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6719","termid":"PBO:0058586"}


id: GO:0036158
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form an axonemal dynein outer arm, an outer arm structure present on the outer doublet microtubules of ciliary and flagellar axonemes.","definition_xrefs":["GOC:BHF","PMID:19944400","GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"axonemal dynein complex assembly","termid":"GO:0070286"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"part_of","termid":"GO:0007010"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0000226"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085","GO:0007010","GO:0000226"],"is_obsolete":false,"name":"outer dynein arm assembly","synonyms":[{"name":"ODA assembly","type":"exact"}],"termid":"GO:0036158"}


id: GO:0047315
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-kynurenine + glyoxylate = 4-(2-aminophenyl)-2,4-dioxobutanoate + glycine.","definition_xrefs":["RHEA:19249","EC:2.6.1.63"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transaminase activity","termid":"GO:0008483"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016769"}],"interesting_parent_ids":["GO:0003674","GO:0016740","GO:0003824","GO:0016769"],"is_obsolete":false,"name":"kynurenine-glyoxylate transaminase activity","secondary_identifiers":["KEGG_REACTION:R01957","MetaCyc:2.6.1.63-RXN"],"synonyms":[{"name":"L-kynurenine:glyoxylate aminotransferase (cyclizing)","type":"related"},{"name":"kynurenine--glyoxylate aminotransferase activity","type":"related"},{"name":"kynurenine-glyoxylate aminotransferase activity","type":"exact"}],"termid":"GO:0047315"}


id: GO:0015247
data:
  {"annotated_genes":["SJAG_03050","SJAG_02516","SJAG_05209","SJAG_01945"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[74315,76704],"is_not":false,"summary":null,"term":"GO:0015247"},{"annotations":[114557,101492],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140346"}]},"cv_name":"molecular_function","definition":"Enables the transfer of aminophospholipids from the exoplasmic to the cytosolic leaflet of a membrane, using energy from the hydrolysis of ATP. Aminophospholipids contain phosphoric acid as a mono- or diester and an amino (NH2) group.","definition_xrefs":["GOC:pg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phospholipid transporter activity","termid":"GO:0005548"},{"relation_name":"is_a","term_name":"flippase activity","termid":"GO:0140327"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01945":null,"SJAG_02516":null,"SJAG_03050":null,"SJAG_05209":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0140303"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0140303","GO:0005215"],"is_obsolete":false,"name":"aminophospholipid flippase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"aminophospholipid transmembrane transporter activity","type":"related"},{"name":"aminophospholipid transporter activity","type":"related"}],"termid":"GO:0015247","terms_by_termid":{"GO:0015247":null,"GO:0140346":null}}


id: PBO:0051042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy constant delta","termid":"PBO:0051042"}


id: PBO:0079131
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tsukushi, small leucine rich proteoglycan","termid":"PBO:0079131"}


id: PBO:0063478
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein disulfide isomerase family A member 6","termid":"PBO:0063478"}


id: CHEBI:16480
data:
  {"annotation_feature_type":"gene","cv_name":"chebi_ontology","direct_ancestors":[{"relation_name":"is_a","term_name":"chemical entity","termid":"CHEBI:24431"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nitric oxide","termid":"CHEBI:16480"}


id: PBO:0120057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial Mam33 family protein, Mam3302","termid":"PBO:0120057"}


id: PBO:0028245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_mitotic_DNA_damage_checkpoint_during_cellular_response_to_UV","termid":"PBO:0028245"}


id: PBO:0085989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for proliferation or remodeling of the ER that is caused by overexpression of Hmg2p; may interact with ribosomes, based on co-purification experiments; HER1 has a paralog, GIP3, that arose from the whole genome duplication","termid":"PBO:0085989"}


id: MOD:01735
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"The protein modification reporter fragment produced by an Proteome Sciences TMT6plex-127 reagent acylated residue.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"TMT6plex-127 reporter+balance reagent acylated residue","termid":"MOD:01728"},{"relation_name":"derives_from","term_name":"cysTMT6plex-127 reporter+balance reagent cysteine disulfide","termid":"MOD:01824"},{"relation_name":"is_a","term_name":"TMT6plex reporter fragment","termid":"MOD:01716"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TMT6plex-127 reporter fragment","synonyms":[{"name":"2,6-dimethyl-1-methylidenepiperidinium","type":"exact"},{"name":"Sixplex Tandem Mass Tag(TM)","type":"related"},{"name":"TMT6plex","type":"related"},{"name":"cysTMT6plex-127 reporter fragment","type":"exact"}],"termid":"MOD:01735"}


id: GO:0032571
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a vitamin K stimulus.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to vitamin","termid":"GO:0033273"},{"relation_name":"is_a","term_name":"response to ketone","termid":"GO:1901654"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to vitamin K","termid":"GO:0032571"}


id: PBO:0040831
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BIRC6 antisense RNA 1","termid":"PBO:0040831"}


id: PBO:0064398
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNKD pseudogene 1","termid":"PBO:0064398"}


id: MONDO:0021367
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"The phase of chronic myeloid leukemia following the chronic phase (leukemia, myeloid, chronic-phase), where there are increased systemic symptoms, worsening cytopenias, and refractory leukocytosis.","definition_xrefs":["MESH:D015465"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chronic myelogenous leukemia, BCR-ABL1 positive","termid":"MONDO:0011996"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"leukemia, myeloid, accelerated-phase","secondary_identifiers":["UMLS:C0023472","NCIT:C3173","MEDGEN:6059"],"synonyms":[{"name":"Accelerated Phase CML","type":"related"},{"name":"Accelerated Phase Chronic Granulocytic Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Granulocytic Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelocytic Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myelocytic Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukemia","type":"related"},{"name":"Accelerated Phase Chronic Myelogenous Leukemia, BCR-ABL1 Positive","type":"related"},{"name":"Accelerated Phase Chronic Myeloid Leukaemia","type":"related"},{"name":"Accelerated Phase Chronic Myeloid Leukemia","type":"related"},{"name":"Accelerated phase chronic myeloid leukaemia","type":"related"},{"name":"Accelerated phase chronic myeloid leukemia","type":"related"},{"name":"Aggressive-Phase CML","type":"related"},{"name":"Aggressive-Phase Chronic Myelocytic Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelocytic Leukemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelogenous Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myelogenous Leukemia","type":"related"},{"name":"Aggressive-Phase Chronic Myeloid Leukaemia","type":"related"},{"name":"Aggressive-Phase Chronic Myeloid Leukemia","type":"related"},{"name":"CML ACCELERATED","type":"related"},{"name":"CML AGGRESSIVE","type":"related"},{"name":"Leukemia, Myelogenous, Aggressive Phase","type":"related"},{"name":"Leukemia, Myelogenous, Aggressive-Phase","type":"related"},{"name":"Leukemia, Myeloid, Accelerated Phase","type":"related"},{"name":"Leukemia, Myeloid, Accelerated-Phase","type":"related"},{"name":"Leukemia, Myeloid, Aggressive-Phase","type":"related"},{"name":"Myelogenous Leukemia, Chronic, Aggressive Phase","type":"related"},{"name":"Myelogenous Leukemia, Chronic, Aggressive-Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Accelerated Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Accelerated-Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Aggressive Phase","type":"related"},{"name":"Myeloid Leukemia, Chronic, Aggressive-Phase","type":"related"}],"termid":"MONDO:0021367","xrefs":{"Monarch":{"xref_id":"0021367"}}}


id: GO:0060510
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a type II pneumocyte. A type II pneumocyte is a surfactant secreting cell that contains abundant cytoplasm containing numerous lipid-rich multilamellar bodies.","definition_xrefs":["GOC:mtg_lung","GOC:dph","ISBN:0721662544"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung secretory cell differentiation","termid":"GO:0061140"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"type II pneumocyte differentiation","synonyms":[{"name":"granular pneumocyte differentiation","type":"related"},{"name":"great alveolar cell differentiation","type":"exact"},{"name":"large alveolar cell differentiation","type":"related"}],"termid":"GO:0060510"}


id: FYPO:0000307
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A viability phenotype in which a spore is unable to survive under conditions in which wild type spores survive, and is smaller than normal. An inviable spore does not germinate.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable spore with abnormal morphology","termid":"FYPO:0000309"},{"relation_name":"is_a","term_name":"small spores","termid":"FYPO:0000346"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000005","FYPO:0000002","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable small spore","synonyms":[{"name":"lethal; small spore","type":"exact"},{"name":"spore germination abolished, small spores","type":"related"}],"termid":"FYPO:0000307"}


id: GO:1900309
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of maltoheptaose metabolic process.","definition_xrefs":["GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of carbohydrate metabolic process","termid":"GO:0006109"},{"relation_name":"regulates","term_name":"maltoheptaose metabolic process","termid":"GO:2001122"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0005975","GO:0008150"],"is_obsolete":false,"name":"regulation of maltoheptaose metabolic process","synonyms":[{"name":"regulation of maltoheptaose metabolism","type":"exact"}],"termid":"GO:1900309"}


id: FYPO:0004783
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of a histone methyltransferase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal chromatin organization","termid":"FYPO:0000642"},{"relation_name":"is_a","term_name":"abnormal protein methyltransferase activity","termid":"FYPO:0005723"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000641"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0000654","FYPO:0000707","FYPO:0000661","FYPO:0000652","FYPO:0001985","FYPO:0005447","FYPO:0000641","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone methyltransferase activity","termid":"FYPO:0004783"}


id: MONDO:0011343
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"follicular atrophoderma, perioral pigmented, with milia and epidermoid cysts","secondary_identifiers":["MEDGEN:350955","MESH:C566360","OMIM:603587","UMLS:C1863692"],"synonyms":[{"name":"follicular atrophoderma, perioral pigmented, with milia and epidermoid cysts","type":"exact"}],"termid":"MONDO:0011343","xrefs":{"Monarch":{"xref_id":"0011343"}}}


id: PBO:0028526
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_tRNA_wobble_base_5-methoxycarbonylmethyl-2-thiouridine_biosynthesis","termid":"PBO:0028526"}


id: PBO:0027407
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_nonsense-mediated_decay","termid":"PBO:0027407"}


id: PBO:0068669
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 50, pseudogene","termid":"PBO:0068669"}


id: MONDO:1011338
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Nutritional disorder that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-human animal disease","termid":"MONDO:0005583"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nutritional disorder, non-human animal","termid":"MONDO:1011338","xrefs":{"Monarch":{"xref_id":"1011338"}}}


id: MONDO:0009595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Cartilage-hair hypoplasia is a disease affecting the bone metaphyses causing small stature from birth.","definition_xrefs":["Orphanet:175"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skeletal system disorder","termid":"MONDO:0005172"},{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"immuno-osseous dysplasia","termid":"MONDO:0015708"},{"relation_name":"is_a","term_name":"ectodermal dysplasia syndrome","termid":"MONDO:0019287"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0005093"},{"rel_name":"is_a","termid":"MONDO:0006025"}],"interesting_parent_ids":["MONDO:0006025","MONDO:0005046","MONDO:0005093"],"is_obsolete":false,"name":"cartilage-hair hypoplasia","secondary_identifiers":["MedDRA:10069596","NORD:1414","GARD:6996","NCIT:C61245","OMIM:250250","SCTID:7720002","DOID:14773","UMLS:C0220748","MEDGEN:67398","MESH:C535916","icd11.foundation:469051294"],"synonyms":[{"name":"CHH","type":"related"},{"name":"McKusick Type Metaphyseal Chondrodysplasia","type":"exact"},{"name":"McKusick type metaphyseal chondrodysplasia","type":"exact"},{"name":"autosomal recessive metaphyseal chondrodysplasia","type":"exact"},{"name":"cartilage hair hypoplasia","type":"exact"},{"name":"cartilage hair hypoplasia like syndrome","type":"related"},{"name":"cartilage-hair hypoplasia","type":"exact"},{"name":"metaphyseal chondrodysplasia McKusick type","type":"related"},{"name":"metaphyseal chondrodysplasia, McKusick type","type":"exact"},{"name":"metaphyseal chondrodysplasia, Mckusick type","type":"related"}],"termid":"MONDO:0009595","xrefs":{"Monarch":{"xref_id":"0009595"}}}


id: PBO:0066347
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RCC1 domain containing 1","termid":"PBO:0066347"}


id: SO:1000115
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:1000115 sequence_variant_causing_complex_3D_structural_change (obsolete SO:1000115)","synonyms":[{"name":"mutation causing complex 3D structural change","type":"related"},{"name":"sequence variant causing complex 3D structural change","type":"exact"}],"termid":"SO:1000115"}


id: GO:0035380
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-3-hydroxyacyl-CoA + NAD(P)+ = 3-oxoacyl-CoA + NAD(P)H + H+, where the acyl group is a very long-chain fatty acid residue. A very long-chain fatty acid has an aliphatic tail containing more than 22 carbons.","definition_xrefs":["GOC:pde"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"very long-chain-3-hydroxyacyl-CoA dehydrogenase activity","synonyms":[{"name":"very-long-chain-3-hydroxyacyl-CoA dehydrogenase activity","type":"exact"}],"termid":"GO:0035380"}


id: MONDO:1012793
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Oculocutaneous albinism that occurs in three-spined stickleback due to a mutation in the HPS5 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oculocutaneous albinism, non-human animal","termid":"MONDO:1012579"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculocutaneous albinism, HPS5-related, three-spined stickleback","secondary_identifiers":["OMIA:002116-69293"],"synonyms":[{"name":"coat colour, albinism, oculocutaneous, HPS5-related in Gasterosteus aculeatus (three-spined stickleback)","type":"exact"}],"termid":"MONDO:1012793","xrefs":{"Monarch":{"xref_id":"1012793"}}}


id: GO:1905911
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of dauer entry.","definition_xrefs":["GO_REF:0000058","PMID:21531333","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of developmental process","termid":"GO:0051094"},{"relation_name":"is_a","term_name":"regulation of dauer entry","termid":"GO:1905909"},{"relation_name":"positively_regulates","term_name":"dauer entry","termid":"GO:0043053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of dauer entry","synonyms":[{"name":"activation of dauer entry","type":"narrow"},{"name":"activation of nematode entry into dormancy","type":"narrow"},{"name":"positive regulation of nematode entry into dormancy","type":"exact"},{"name":"up regulation of dauer entry","type":"exact"},{"name":"up regulation of nematode entry into dormancy","type":"exact"},{"name":"up-regulation of dauer entry","type":"exact"},{"name":"up-regulation of nematode entry into dormancy","type":"exact"},{"name":"upregulation of dauer entry","type":"exact"},{"name":"upregulation of nematode entry into dormancy","type":"exact"}],"termid":"GO:1905911"}


id: PBO:0088837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitotic cohesin complex kleisin subunit Rad21","termid":"PBO:0088837"}


id: PBO:0091701
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"is not complemented by human ATR","termid":"PBO:0091701"}


id: FYPO:0000732
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A spindle phenotype in which the mitotic spindle is shorter than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"short spindle","termid":"FYPO:0000130"},{"relation_name":"is_a","term_name":"abnormal bipolar mitotic spindle","termid":"FYPO:0001574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000054"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000120"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002399"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000120","FYPO:0001320","FYPO:0005447","FYPO:0000054","FYPO:0002399","FYPO:0000002","FYPO:0001985"],"is_obsolete":false,"name":"short bipolar mitotic spindle","synonyms":[{"name":"decreased mitotic spindle length","type":"exact"},{"name":"short mitotic spindle","type":"exact"},{"name":"short mitotic spindle during vegetative growth","type":"exact"},{"name":"short mitotic spindles","type":"exact"},{"name":"short spindle during mitosis","type":"exact"},{"name":"short spindle during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000732"}


id: GO:0043528
data:
  {"annotated_genes":["SJAG_04890","SJAG_04181"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[77352,106152],"is_not":false,"summary":null,"term":"GO:0043528"}]},"cv_name":"cellular_component","definition":"A protein complex required for the methylation of the guanosine nucleotide at position 10 (m2G10) in tRNA. In S. cerevisiae, this complex consists of at least two subunits, Trm11p and Trm112p.","definition_xrefs":["PMID:15899842"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA methyltransferase complex","termid":"GO:0043527"}],"gene_count":2,"genes_by_uniquename":{"SJAG_04181":null,"SJAG_04890":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"tRNA (m2G10) methyltransferase complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0043528","terms_by_termid":{"GO:0043528":null}}


id: GO:0050616
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: loganin + NADPH + H+ + O2 = secologanin + NADP+ + 2 H2O.","definition_xrefs":["MetaCyc:1.3.3.9-RXN","EC:1.14.19.62"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-CH group of donors, oxygen as acceptor","termid":"GO:0016634"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"secologanin synthase activity","secondary_identifiers":["RHEA:20585"],"synonyms":[{"name":"loganin:oxygen oxidoreductase (ring-cleaving)","type":"related"}],"termid":"GO:0050616"}


id: MONDO:0006691
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete causalgia (obsolete MONDO:0006691)","termid":"MONDO:0006691","xrefs":{"Monarch":{"xref_id":"0006691"}}}


id: PBO:0081055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger CCHC-type containing 12","termid":"PBO:0081055"}


id: PR:Q09718
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An AP-2 complex subunit mu that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO00157"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"AP-2 complex subunit mu (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.09c","secondary_identifiers":["UniProtKB:Q09718"],"synonyms":[{"name":"Mu2-adaptin (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-AP2M1","type":"exact"},{"name":"clathrin assembly protein complex 2 mu medium chain (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin coat assembly protein AP50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"clathrin coat-associated protein AP50 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"plasma membrane adaptor AP-2 50 kDa protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09718"}


id: GO:0002756
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A toll-like receptor signaling pathway not relying on the MyD88 adaptor molecule. Toll-like receptors directly bind pattern motifs from a variety of microbial sources to initiate innate an immune response.","definition_xrefs":["PMID:12467241","GOC:add","ISBN:0781735149","PMID:12524386","PMID:12855817","PMID:15585605","PMID:15728447"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toll-like receptor signaling pathway","termid":"GO:0002224"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0008150","GO:0023052"],"is_obsolete":false,"name":"MyD88-independent toll-like receptor signaling pathway","secondary_identifiers":["Reactome:R-HSA-166166","Reactome:R-HSA-168927"],"synonyms":[{"name":"MyD88-independent TLR signaling pathway","type":"exact"},{"name":"MyD88-independent toll-like receptor signalling pathway","type":"exact"}],"termid":"GO:0002756"}


id: MONDO:0010752
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"VACTERL/vater association","termid":"MONDO:0008642"},{"relation_name":"is_a","term_name":"VACTERL with hydrocephalus","termid":"MONDO:0010172"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"VACTERL association, X-linked, with or without hydrocephalus","secondary_identifiers":["MEDGEN:419019","DOID:0111766","OMIM:314390","UMLS:C2931228","GARD:15309"],"synonyms":[{"name":"VACTERL association with hydrocephaly, X-linked","type":"related"},{"name":"VACTERL association, X-linked, X-linked recessive","type":"exact"},{"name":"VACTERL association, X-linked, with or without hydrocephalus","type":"exact"},{"name":"VACTERL-H, X-linked","type":"related"},{"name":"VACTERLX","type":"related"},{"name":"X-linked VACTERL-H syndrome","type":"related"}],"termid":"MONDO:0010752","xrefs":{"Monarch":{"xref_id":"0010752"}}}


id: MONDO:0030981
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"severe combined immunodeficiency","termid":"MONDO:0015974"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"immunodeficiency 79","secondary_identifiers":["OMIM:619238","MEDGEN:1783683","UMLS:C5543220","GARD:9523","DOID:0112277"],"synonyms":[{"name":"CD4 Deficiency","type":"exact"},{"name":"IMD79","type":"exact"},{"name":"immunodeficiency 79","type":"exact"}],"termid":"MONDO:0030981","xrefs":{"Monarch":{"xref_id":"0030981"}}}


id: PBO:0111737
data:
  {"annotation_feature_type":"gene","cv_name":"feature_relationshipprop_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"exogenous_promoter","termid":"PBO:0111737"}


id: PBO:0013013
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U4/U6 x U5 tri-snRNP complex subunit Snu23","termid":"PBO:0013013"}


id: MONDO:0001378
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant neoplasm involving the urachus.","direct_ancestors":[{"relation_name":"is_a","term_name":"urinary bladder cancer","termid":"MONDO:0001187"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"urachus cancer","secondary_identifiers":["ICD9:188.7","ICD10CM:C67.7","DOID:11817","SCTID:363456000","MEDGEN:509342","UMLS:C0153615"],"synonyms":[{"name":"cancer of urachus","type":"exact"},{"name":"malignant neoplasm of urachus","type":"exact"},{"name":"malignant tumor of urachus","type":"exact"},{"name":"malignant tumour of urachus","type":"exact"},{"name":"malignant urachus neoplasm","type":"exact"},{"name":"urachus cancer","type":"exact"}],"termid":"MONDO:0001378","xrefs":{"Monarch":{"xref_id":"0001378"}}}


id: PR:Q9Y7J9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mcp5 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9Y7J9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic coiled-coil protein 5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC216.02","synonyms":[{"name":"Spom972h-mcp5","type":"exact"},{"name":"meiotically up-regulated gene 21 protein (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"nuclear migration protein num1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9Y7J9"}


id: PBO:0001376
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex subunit Hcn1","termid":"PBO:0001376"}


id: MONDO:0003620
data:
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id: PBO:0067028
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 41, pseudogene","termid":"PBO:0067028"}


id: PBO:0029466
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_fructose_binding","termid":"PBO:0029466"}


id: GO:1901388
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transforming growth factor beta activation.","definition_xrefs":["GOC:TermGenie","GOC:sl"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transforming growth factor beta activation (obsolete GO:1901388)","synonyms":[{"name":"regulation of L-TGF-beta activation","type":"exact"},{"name":"regulation of TGF-B activation","type":"exact"},{"name":"regulation of TGF-beta activation","type":"exact"},{"name":"regulation of TGFB activation","type":"exact"},{"name":"regulation of TGFbeta activation","type":"exact"},{"name":"regulation of latent TGF-beta activation","type":"exact"}],"termid":"GO:1901388"}


id: SO:0000922
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An edit to substitute an U for a C.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000922 substitute_C_to_U (obsolete SO:0000922)","synonyms":[{"name":"substitute C to U","type":"exact"}],"termid":"SO:0000922"}


id: MONDO:0004868
data:
  {"annotated_genes":["SJAG_00938","SJAG_03011","SJAG_05194","SJAG_03363"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011559"},{"annotations":[89042],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013995"},{"annotations":[88976,88975],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030810"},{"annotations":[87852],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031040"},{"annotations":[87324],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010939"},{"annotations":[88907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011156"},{"annotations":[87520],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011214"}]},"cv_name":"mondo","definition":"A disease involving the biliary tree.","direct_ancestors":[{"relation_name":"is_a","term_name":"hepatobiliary disorder","termid":"MONDO:0002515"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00938":null,"SJAG_03011":null,"SJAG_03363":null,"SJAG_05194":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0002515"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0002515"],"is_obsolete":false,"name":"biliary tract disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ICD9:576.9","MESH:D001660","MEDGEN:108201","EFO:0009534","SCTID:105997008","UMLS:C0549613","DOID:9741"],"synonyms":[{"name":"biliary tree disease","type":"exact"},{"name":"biliary tree disease or disorder","type":"exact"},{"name":"disease of biliary tree","type":"exact"},{"name":"disease or disorder of biliary tree","type":"exact"},{"name":"disorder of biliary tree","type":"exact"}],"termid":"MONDO:0004868","terms_by_termid":{"MONDO:0010939":null,"MONDO:0011156":null,"MONDO:0011214":null,"MONDO:0011559":null,"MONDO:0013995":null,"MONDO:0030810":null,"MONDO:0031040":null},"xrefs":{"Monarch":{"xref_id":"0004868"}}}


id: PBO:0113071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Conserved mitochondrial YihA GTPase family member; required for efficient cellular respiration; localizes to mitochondrial inner membrane facing matrix side; associates with mitochondrial ribosome; required for de novo Cox1p synthesis at suboptimal temperatures; sumoylated under stress conditions","termid":"PBO:0113071"}


id: GO:0090109
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of cell-substrate junction assembly. Cell-substrate junction assembly is the aggregation, arrangement and bonding together of a set of components to form a junction between a cell and its substrate.","definition_xrefs":["GOC:tb","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell-substrate junction organization","termid":"GO:0150116"},{"relation_name":"is_a","term_name":"regulation of cell junction assembly","termid":"GO:1901888"},{"relation_name":"regulates","term_name":"cell-substrate junction assembly","termid":"GO:0007044"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0044085"],"is_obsolete":false,"name":"regulation of cell-substrate junction assembly","termid":"GO:0090109"}


id: _global:causally_upstream_of_or_within
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  {"annotation_feature_type":"gene","cv_name":"external","definition":"p is 'causally upstream or within' q iff p is causally related to q, and the end of p precedes, or is coincident with, the end of q.","direct_ancestors":[{"relation_name":"is_a","term_name":"causal_relation_between_processes","termid":"_global:causal_relation_between_processes"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"causally_upstream_of_or_within","secondary_identifiers":["RO:0002418"],"synonyms":[{"name":"affects","type":"related"}],"termid":"_global:causally_upstream_of_or_within"}


id: PBO:0080820
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"XXYLT1 antisense RNA 1","termid":"PBO:0080820"}


id: PBO:0013061
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous Pmf1 factor 1, isoleucine biosynthesis protein (predicted)","termid":"PBO:0013061"}


id: GO:0000506
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  {"annotated_genes":["SJAG_03066","SJAG_02804","SJAG_04119","SJAG_02913","SJAG_04881","SJAG_06383"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[58821,72904,79414,95005,95095,110621],"is_not":false,"summary":null,"term":"GO:0000506"}]},"cv_name":"cellular_component","definition":"An enzyme complex that catalyzes the transfer of GlcNAc from UDP-GlcNAc to an acceptor phosphatidylinositol, the first step in the production of GPI anchors for cell surface proteins. The complex contains PIG-A, PIG-C, PIG-H, PIG-Q, PIG-P, and DPM2 in human, and Eri1p, Gpi1p, Gpi2p, Gpi15p, Gpi19p, and Spt14p in budding yeast.","definition_xrefs":["PMID:10944123","PMID:15163411","GOC:kp","GOC:rb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"is_a","term_name":"endoplasmic reticulum protein-containing complex","termid":"GO:0140534"},{"relation_name":"is_a","term_name":"transferase complex","termid":"GO:1990234"},{"relation_name":"part_of","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"}],"gene_count":6,"genes_by_uniquename":{"SJAG_02804":null,"SJAG_02913":null,"SJAG_03066":null,"SJAG_04119":null,"SJAG_04881":null,"SJAG_06383":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005737","GO:0005575","GO:0005789","GO:0005783","GO:0032991"],"is_obsolete":false,"name":"glycosylphosphatidylinositol-N-acetylglucosaminyltransferase (GPI-GnT) complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"GPI-GlcNAc transferase complex","type":"exact"},{"name":"GPI-GnT complex","type":"exact"},{"name":"GPI-N-acetylglucosaminyltransferase complex","type":"exact"}],"termid":"GO:0000506","terms_by_termid":{"GO:0000506":null}}


id: PBO:0047685
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fibronectin leucine rich transmembrane protein 2","termid":"PBO:0047685"}


id: GO:0034575
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-isopropylaniline + H2O = 4'-(2-hydroxyisopropyl)phenylaniline + 2 H+ + 2 e-.","definition_xrefs":["UM-BBD_reactionID:r0901"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-isopropylaniline dehydrogenase activity (obsolete GO:0034575)","termid":"GO:0034575"}


id: PBO:0005056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexose transporter Ght1","termid":"PBO:0005056"}


id: PBO:0068650
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U4 small nuclear 31, pseudogene","termid":"PBO:0068650"}


id: GO:1903796
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of inorganic anion transmembrane transport.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:11336802"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of transmembrane transport","termid":"GO:0034763"},{"relation_name":"is_a","term_name":"regulation of inorganic anion transmembrane transport","termid":"GO:1903795"},{"relation_name":"negatively_regulates","term_name":"inorganic anion transmembrane transport","termid":"GO:0098661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0006810"},{"rel_name":"negatively_regulates","termid":"GO:0055085"},{"rel_name":"regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0006810"],"is_obsolete":false,"name":"negative regulation of inorganic anion transmembrane transport","synonyms":[{"name":"down regulation of inorganic anion membrane transport","type":"exact"},{"name":"down regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"down regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"down-regulation of inorganic anion membrane transport","type":"exact"},{"name":"down-regulation of inorganic anion transmembrane transport","type":"exact"},{"name":"down-regulation of transmembrane inorganic anion transport","type":"exact"},{"name":"downregulation of inorganic anion membrane transport","type":"exact"},{"name":"downregulation of inorganic anion transmembrane transport","type":"exact"},{"name":"downregulation of transmembrane inorganic anion transport","type":"exact"},{"name":"inhibition of inorganic anion membrane transport","type":"narrow"},{"name":"inhibition of inorganic anion transmembrane transport","type":"narrow"},{"name":"inhibition of transmembrane inorganic anion transport","type":"narrow"},{"name":"negative regulation of inorganic anion membrane transport","type":"exact"},{"name":"negative regulation of transmembrane inorganic anion transport","type":"exact"}],"termid":"GO:1903796"}


id: PBO:0070397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RORB antisense RNA 1","termid":"PBO:0070397"}


id: MONDO:0000079
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"osteoporosis","termid":"MONDO:0005298"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"nephrolithiasis/osteoporosis, hypophosphatemic","secondary_identifiers":["DOID:0080655","OMIMPS:612286"],"termid":"MONDO:0000079","xrefs":{"Monarch":{"xref_id":"0000079"}}}


id: GO:0033178
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  {"annotated_genes":["SJAG_01397","SJAG_04015","SJAG_01817","SJAG_00212","SJAG_04955","SJAG_01471","SJAG_01447","SJAG_00136"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[100928,98622,120808,61314,111917,90042,104685,73169],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000221"}]},"cv_name":"cellular_component","definition":"A protein complex that forms part of a proton-transporting two-sector ATPase complex and catalyzes ATP hydrolysis or synthesis. The catalytic domain (F1, V1, or A1) comprises a hexameric catalytic core and a central stalk, and is peripherally associated with the membrane when the two-sector ATPase is assembled.","definition_xrefs":["GOC:mah","PMID:10838056"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein complex","termid":"GO:0098796"},{"relation_name":"part_of","term_name":"proton-transporting two-sector ATPase complex","termid":"GO:0016469"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00136":null,"SJAG_00212":null,"SJAG_01397":null,"SJAG_01447":null,"SJAG_01471":null,"SJAG_01817":null,"SJAG_04015":null,"SJAG_04955":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"proton-transporting two-sector ATPase complex, catalytic domain","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033178","terms_by_termid":{"GO:0000221":null}}


id: PBO:0063365
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proprotein convertase subtilisin/kexin type 5","termid":"PBO:0063365"}


id: FYPO:0008237
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of glycerophospholipid measured in a cell is normal (i.e. indistinguishable from wild type) when the cell is in the vegetative growth phase of the life cycle.","direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell","termid":"FYPO:0001076"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal glycerophospholipid level during vegetative growth","termid":"FYPO:0008237"}


id: GO:0042201
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving N-cyclopropylmelamine, a triazine compound commonly used as an insect growth regulator insecticide.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"N-cyclopropylmelamine metabolic process","synonyms":[{"name":"N-cyclopropylmelamine metabolism","type":"exact"},{"name":"cyromazine metabolic process","type":"exact"},{"name":"cyromazine metabolism","type":"exact"}],"termid":"GO:0042201"}


id: PBO:0044752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DEAD-box helicase 39A pseudogene 1","termid":"PBO:0044752"}


id: MONDO:0008324
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pseudoarthrogryposis","secondary_identifiers":["OMIM:177300","MEDGEN:356790","MESH:C566753","UMLS:C1867485"],"synonyms":[{"name":"ankylosis at elbow and knee","type":"related"},{"name":"hereditary congenital rigidity of elbows and knees","type":"related"},{"name":"pseudoarthrogryposis","type":"exact"}],"termid":"MONDO:0008324","xrefs":{"Monarch":{"xref_id":"0008324"}}}


id: PBO:0053522
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 517","termid":"PBO:0053522"}


id: GO:0016052
data:
  {"annotated_genes":["SJAG_00485","SJAG_06309","SJAG_03851","SJAG_06621","SJAG_02478","SJAG_06622","SJAG_04192","SJAG_04048","SJAG_00237","SJAG_03646","SJAG_00096","SJAG_04851","SJAG_02369","SJAG_02435","SJAG_00027","SJAG_02785","SJAG_01561","SJAG_01171","SJAG_00115","SJAG_04334","SJAG_04660","SJAG_03174","SJAG_02950","SJAG_05006","SJAG_02010","SJAG_00461","SJAG_04495","SJAG_00667","SJAG_00685","SJAG_04238","SJAG_00605","SJAG_01029","SJAG_05272","SJAG_04850","SJAG_03828","SJAG_03903","SJAG_04301","SJAG_01017","SJAG_02796","SJAG_04327","SJAG_02954","SJAG_02949","SJAG_03660","SJAG_02076","SJAG_04963","SJAG_03373","SJAG_00620","SJAG_01888","SJAG_04789","SJAG_02945","SJAG_04276","SJAG_03824","SJAG_02009","SJAG_00839","SJAG_03444","SJAG_02951","SJAG_02107","SJAG_01310","SJAG_05001","SJAG_00310","SJAG_05314","SJAG_03295","SJAG_03958","SJAG_03818","SJAG_01783","SJAG_02135","SJAG_04320","SJAG_02649","SJAG_04859","SJAG_02131"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[57872,58255,58486,60270,60903,64330,65096,69100,97231,106016],"is_not":false,"summary":null,"term":"GO:0016052"},{"annotations":[90616],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019564"},{"annotations":[97762,97031,103202],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019568"},{"annotations":[111436,111441,105655,105398,96536,74386,107480,107849,111439,100004,79788,107850,111438,111440,107481,111437,111442,100275,118409,107479],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061621"},{"annotations":[121648],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0030995"},{"annotations":[102171,96029],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044347"},{"annotations":[59235],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019303"},{"annotations":[97763,103203,97033],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042843"},{"annotations":[115791,115780,115773,115779],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0033499"},{"annotations":[72545,72442,75217,79009,77055],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0009251"},{"annotations":[80583,73984],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0019563"},{"annotations":[105320],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005980"},{"annotations":[90617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061613"},{"annotations":[73776,74036,75057,80793,81804,75349],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061723"},{"annotations":[103618,103617],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000025"},{"annotations":[69836],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005995"},{"annotations":[78092,75038],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0045820"},{"annotations":[59325,110434,68668,117689,98123,98124],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000272"},{"annotations":[98586],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:2001172"},{"annotations":[91703],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1905857"},{"annotations":[71970],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0006110"},{"annotations":[78091],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0043456"},{"annotations":[74571],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006062"},{"annotations":[78755],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005987"},{"annotations":[73434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005993"},{"annotations":[121108],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005998"}]},"cv_name":"biological_process","definition":"The 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