# terms

id: FYPO:0002745
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-proline measured in the cell is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal level of substance in cell during vegetative growth","termid":"FYPO:0001316"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0000257","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal cellular proline level","synonyms":[{"name":"normal cellular L-proline level","type":"exact"},{"name":"normal cellular proline level during mitotic cell cycle","type":"related"},{"name":"normal cellular proline level during vegetative growth","type":"exact"},{"name":"normal level of proline in cell","type":"exact"}],"termid":"FYPO:0002745"}


id: PBO:0038417
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_anatomical_participant","termid":"PBO:0038417"}


id: MONDO:0021459
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign neoplasm that involves the esophagus.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"benign digestive system neoplasm","termid":"MONDO:0000385"},{"relation_name":"is_a","term_name":"thoracic benign neoplasm","termid":"MONDO:0000634"},{"relation_name":"is_a","term_name":"neoplasm of esophagus","termid":"MONDO:0021355"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"benign neoplasm of esophagus","secondary_identifiers":["SCTID:92091003","UMLS:C0153942","ICD10CM:D13.0","ICD9:211.0","MEDGEN:102297","NCIT:C3598"],"synonyms":[{"name":"benign esophageal neoplasm","type":"exact"},{"name":"benign esophageal tumor","type":"exact"},{"name":"benign esophageal tumour","type":"exact"},{"name":"benign esophagus neoplasm","type":"exact"},{"name":"benign esophagus tumor","type":"exact"},{"name":"benign neoplasm of the esophagus","type":"exact"},{"name":"benign neoplasm of the oesophagus","type":"exact"},{"name":"benign oesophagus neoplasm","type":"exact"},{"name":"benign oesophagus tumour","type":"exact"},{"name":"benign tumor of esophagus","type":"exact"},{"name":"benign tumor of the esophagus","type":"exact"},{"name":"benign tumour of oesophagus","type":"exact"},{"name":"benign tumour of the oesophagus","type":"exact"},{"name":"esophagus benign neoplasm","type":"exact"},{"name":"oesophagus benign neoplasm","type":"exact"}],"termid":"MONDO:0021459","xrefs":{"Monarch":{"xref_id":"0021459"}}}


id: MONDO:0005233
data:
  {"annotated_genes":["SJAG_03689"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88331],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011014"}]},"cv_name":"mondo","definition":"A group of at least three distinct histological types of lung cancer, including non-small cell squamous cell carcinoma, adenocarcinoma, and large cell carcinoma. Non-small cell lung carcinomas have a poor response to conventional chemotherapy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung carcinoma","termid":"MONDO:0005138"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03689":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"non-small cell lung carcinoma","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["ONCOTREE:NSCLC","SCTID:254637007","NCIT:C2926","EFO:0003060","HP:0030358","Orphanet:488201","UMLS:C0007131","MEDGEN:40104","MESH:D002289","DOID:3908"],"synonyms":[{"name":"NSCLC","type":"exact"},{"name":"NSCLC - non-small cell lung cancer","type":"exact"},{"name":"non-small cell cancer of lung","type":"exact"},{"name":"non-small cell cancer of the lung","type":"exact"},{"name":"non-small cell carcinoma of lung","type":"exact"},{"name":"non-small cell carcinoma of the lung","type":"exact"},{"name":"non-small cell lung cancer","type":"exact"},{"name":"non-small cell lung carcinoma","type":"exact"},{"name":"non-small cell lung carcinoma (disease)","type":"exact"}],"termid":"MONDO:0005233","terms_by_termid":{"MONDO:0011014":null},"xrefs":{"Monarch":{"xref_id":"0005233"}}}


id: GO:0043629
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The enzymatic addition of a sequence of adenylyl residues at the 3' end of a non-coding RNA (ncRNA) molecule. In eukaryotes, substrates include nuclear non-coding RNAs such as precursors and a variety of incorrectly processed forms of snRNAs, snoRNAs, rRNAs, and tRNAs, as well as discarded RNA fragments which have been removed from ncRNA primary transcripts. Polyadenylation of precursors is often linked to termination of transcription, but polyadenylation of RNAs targeted for degradation may also occur post-transcriptionally. This polyadenylation is important both for 3'-end processing to produce mature ncRNA species and also for targeting incorrectly processed or discarded RNA molecules for degradation.","definition_xrefs":["PMID:15828860","PMID:16374505","PMID:18951092","GOC:dgf","GOC:rn","PMID:15935758","GOC:krc","PMID:16431988"],"gene_count":0,"genotype_count":0,"name":"obsolete ncRNA polyadenylation (obsolete GO:0043629)","synonyms":[{"name":"non-coding RNA polyadenylation","type":"exact"}],"termid":"GO:0043629"}


id: PBO:0030771
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H3-K14_acetylation_at_centromere_outer_repeat","termid":"PBO:0030771"}


id: PBO:0110234
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BouQueT formation protein","termid":"PBO:0110234"}


id: GO:0008379
data:
  {"annotated_genes":["SJAG_00141","SJAG_02515","SJAG_01216","SJAG_03166","SJAG_01199"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72199,77795,81365,97212,110877],"is_not":false,"summary":null,"term":"GO:0008379"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: [thioredoxin]-dithiol + hydrogen peroxide = [thioredoxin]-disulfide + H2O.","definition_xrefs":["RHEA:63528"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thioredoxin-dependent peroxiredoxin activity","termid":"GO:0140824"}],"gene_count":5,"genes_by_uniquename":{"SJAG_00141":null,"SJAG_01199":null,"SJAG_01216":null,"SJAG_02515":null,"SJAG_03166":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051920"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0051920","GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"thioredoxin peroxidase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-3322995","Reactome:R-HSA-3341343","GO:0009031","Reactome:R-HSA-3697894","MetaCyc:RXN0-267","Reactome:R-HSA-3697882"],"synonyms":[{"name":"TPx activity","type":"exact"},{"name":"TrxPx activity","type":"exact"},{"name":"thiol peroxidase activity","type":"exact"}],"termid":"GO:0008379","terms_by_termid":{"GO:0008379":null}}


id: GO:0060426
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung vasculature from an initial condition to its mature state. This process begins with the formation of the lung vasculature and ends with the mature structure. The lung vasculature is composed of the tubule structures that carry blood or lymph in the lungs.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vasculature development","termid":"GO:0001944"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung vasculature development","synonyms":[{"name":"pulmonary vasculature development","type":"exact"}],"termid":"GO:0060426"}


id: FYPO:0005019
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell cycle phenotype observed in the vegetative growth phase of the life cycle in which the duration of septum assembly is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal septum assembly","termid":"FYPO:0000673"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001312","FYPO:0000257","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of septum assembly","synonyms":[{"name":"normal duration of division septum assembly","type":"exact"},{"name":"normal duration of septation","type":"broad"},{"name":"normal duration of septum assembly during mitotic cell cycle","type":"related"},{"name":"normal duration of septum assembly during vegetative growth","type":"exact"}],"termid":"FYPO:0005019"}


id: PBO:0003602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial protein, ribosomal subunit L35 (predicted)","termid":"PBO:0003602"}


id: MONDO:0001320
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"scleral disorder","termid":"MONDO:0001269"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"ring staphyloma","secondary_identifiers":["ICD10CM:H15.85","SCTID:5299007","UMLS:C0155363","DOID:11594","icd11.foundation:7248227","MEDGEN:509937","ICD9:379.15"],"termid":"MONDO:0001320","xrefs":{"Monarch":{"xref_id":"0001320"}}}


id: PBO:0113411
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ribosomal 60S subunit protein L24B; forms two bridges within ribosome, stimulates translation initiation and elongation; homologous to mammalian ribosomal protein L24, no bacterial homolog; RPL24B has a paralog, RPL24A, that arose from the whole genome duplication","termid":"PBO:0113411"}


id: GO:0102251
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 10'-apo-beta-carotenal + O2 = 13-apo-beta-carotenone + 4-methylocta-2,4,6-trienedial.","definition_xrefs":["EC:1.13.11.70","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"all-trans-beta-apo-10'-carotenal cleavage oxygenase activity","secondary_identifiers":["RHEA:26401","MetaCyc:RXN-12393"],"termid":"GO:0102251"}


id: PATO:0002022
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A concave 3-D shape quality inhering in a bearer by virtue of the bearer's resembling a minute projection (villus).","definition_xrefs":["PATOC:PEM"],"direct_ancestors":[{"relation_name":"is_a","term_name":"concave 3-D shape","termid":"PATO:0002008"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"villiform","termid":"PATO:0002022"}


id: PBO:0066508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulatory factor X5","termid":"PBO:0066508"}


id: GO:0044222
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"An intracytoplasmic membrane-bounded compartment in anaerobic ammonium oxidation (anammox) bacteria, is the site of anammox catabolism.","definition_xrefs":["PMID:17993524","GOC:dh","PMID:19682260"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular membrane-bounded organelle","termid":"GO:0043231"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005737"],"is_obsolete":false,"name":"anammoxosome","termid":"GO:0044222"}


id: PBO:0074989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 114-31","termid":"PBO:0074989"}


id: GO:1900356
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of methanofuran metabolic process.","definition_xrefs":["GOC:mengo_curators","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of metabolic process","termid":"GO:0009893"},{"relation_name":"is_a","term_name":"regulation of methanofuran metabolic process","termid":"GO:1900354"},{"relation_name":"positively_regulates","term_name":"methanofuran metabolic process","termid":"GO:2001119"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of methanofuran metabolic process","synonyms":[{"name":"activation of methanofuran metabolic process","type":"narrow"},{"name":"activation of methanofuran metabolism","type":"exact"},{"name":"positive regulation of methanofuran metabolism","type":"exact"},{"name":"up regulation of methanofuran metabolic process","type":"exact"},{"name":"up regulation of methanofuran metabolism","type":"exact"},{"name":"up-regulation of methanofuran metabolic process","type":"exact"},{"name":"up-regulation of methanofuran metabolism","type":"exact"},{"name":"upregulation of methanofuran metabolic process","type":"exact"},{"name":"upregulation of methanofuran metabolism","type":"exact"}],"termid":"GO:1900356"}


id: PBO:0078453
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor gamma variable 5P (pseudogene)","termid":"PBO:0078453"}


id: GO:0071043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The chemical reactions and pathways involving cryptic unstable transcripts (CUTs), which are transcribed from intergenic regions. Many intergenic regions are heavily transcribed, but the transcripts are rarely detected due to rapid degradation by the nuclear exosome.","definition_xrefs":["GOC:dgf","GOC:krc","PMID:16973436","PMID:15935759"],"gene_count":0,"genotype_count":0,"name":"obsolete CUT metabolic process (obsolete GO:0071043)","termid":"GO:0071043"}


id: MONDO:0035383
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete FOXG1 syndrome (obsolete MONDO:0035383)","secondary_identifiers":["GARD:12825"],"termid":"MONDO:0035383","xrefs":{"Monarch":{"xref_id":"0035383"}}}


id: GO:0035159
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Ensuring that a tube in an open tracheal system is of the correct length.","definition_xrefs":["GOC:mtg_sensu","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tube size, open tracheal system","termid":"GO:0035151"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of tube length, open tracheal system","synonyms":[{"name":"regulation of tracheal tube length","type":"exact"},{"name":"tracheal tube elongation","type":"narrow"}],"termid":"GO:0035159"}


id: GO:0015759
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of beta-glucosides into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Beta-glucosides are glycosides in which the sugar group is a glucose residue, and the anomeric carbon of the bond is in a beta configuration.","definition_xrefs":["ISBN:0198506732","PMID:6756954","GOC:jl","PMID:3034860"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glucoside transport","termid":"GO:0042946"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"beta-glucoside transport","termid":"GO:0015759"}


id: PBO:0057961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3682","termid":"PBO:0057961"}


id: GO:0110040
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the nematode pharynx are generated and organized.","definition_xrefs":["GOC:rz","PMID:20805556"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nematode pharynx morphogenesis","termid":"GO:0110040"}


id: PBO:0030936
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_protein_localization_to_linear_element","termid":"PBO:0030936"}


id: PBO:0078396
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Phe (anticodon GAA) 6-1","termid":"PBO:0078396"}


id: MONDO:0012317
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"chronic intestinal pseudoobstruction","termid":"MONDO:0017574"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"visceral neuropathy, familial, 3, autosomal dominant","secondary_identifiers":["DOID:0080682","UMLS:C1864996","MEDGEN:351272","OMIM:609629"],"synonyms":[{"name":"enteric neuropathy, familial","type":"related"},{"name":"pseudoobstruction, chronic intestinal, neuropathic","type":"related"},{"name":"pseudoobstruction, idiopathic intestinal","type":"related"},{"name":"visceral neuropathy, familial, autosomal dominant","type":"exact"}],"termid":"MONDO:0012317","xrefs":{"Monarch":{"xref_id":"0012317"}}}


id: MOD:01068
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively substitutes a hydrogen atom of an L-tryptophan residue with a halogen atom.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"halogen containing residue","termid":"MOD:00694"},{"relation_name":"is_a","term_name":"modified L-tryptophan residue","termid":"MOD:00918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"halogenated tryptophan","synonyms":[{"name":"HalTrp","type":"exact"}],"termid":"MOD:01068"}


id: PBO:0111648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative cofactor 2 complex subunit Ncb2","termid":"PBO:0111648"}


id: PBO:0060633
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nicalin","termid":"PBO:0060633"}


id: PBO:0040752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"bradykinin receptor B1","termid":"PBO:0040752"}


id: PBO:0076432
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TATA-box binding protein associated factor 11 like 8","termid":"PBO:0076432"}


id: PBO:0040683
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCAS2 pseudogene 1","termid":"PBO:0040683"}


id: PBO:0086253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein that plays a role in modification of tRNA wobble nucleosides; protein plays role in tRNA wobble nucleoside modification with Elongator complex; involved in sensitivity to G1 arrest induced by zymocin; interacts with chromatin throughout the genome; also interacts with Cdc19p","termid":"PBO:0086253"}


id: PBO:0003228
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Vid27 family protein","termid":"PBO:0003228"}


id: PBO:0005211
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"LIG4 syndrome","termid":"PBO:0005211"}


id: FYPO:0003854
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to an oligomycin antibiotic. Cells stop growing (and may die) at a concentration of oligomycin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased sensitivity to chemical during vegetative growth","termid":"FYPO:0000127"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0005447","FYPO:0001985","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to oligomycin","synonyms":[{"name":"hypersensitive to oligomycin","type":"exact"},{"name":"sensitive to oligomycin during mitotic cell cycle","type":"related"},{"name":"sensitive to oligomycin during vegetative growth","type":"exact"}],"termid":"FYPO:0003854"}


id: PBO:0063787
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PHD finger protein 12","termid":"PBO:0063787"}


id: PBO:0052364
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin family member 13A","termid":"PBO:0052364"}


id: PBO:0029500
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-viable_curved_elongated_vegetative_cell","termid":"PBO:0029500"}


id: FYPO_EXT:1000001
data:
  {"annotation_feature_type":"gene","cv_name":"fypo_extensions","definition":"FYPO extension ontology grouping term for relations relevant to severity","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"FYPO extension","termid":"FYPO_EXT:1000000"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FYPO severity extension","termid":"FYPO_EXT:1000001"}


id: GO:2000742
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of anterior head development.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of developmental process","termid":"GO:0050793"},{"relation_name":"regulates","term_name":"anterior head development","termid":"GO:0097065"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of anterior head development","termid":"GO:2000742"}


id: PBO:0083582
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; transcription of both YCR013C and the overlapping essential gene PGK1 is reduced in a gcr1 null mutant","termid":"PBO:0083582"}


id: PBO:0047896
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fragile site, aphidicolin type, common, fra(7)(p14.2)","termid":"PBO:0047896"}


id: GO:0019300
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of rhamnose, the hexose 6-deoxy-L-mannose.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexose biosynthetic process","termid":"GO:0019319"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0005975","GO:0008150"],"is_obsolete":false,"name":"rhamnose biosynthetic process","synonyms":[{"name":"rhamnose anabolism","type":"exact"},{"name":"rhamnose biosynthesis","type":"exact"},{"name":"rhamnose formation","type":"exact"},{"name":"rhamnose synthesis","type":"exact"}],"termid":"GO:0019300"}


id: PBO:0078518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TRIM8 divergent transcript","termid":"PBO:0078518"}


id: GO:0000304
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a singlet oxygen stimulus. Singlet oxygen is a dioxygen (O2) molecule in which two 2p electrons have similar spin. Singlet oxygen is more highly reactive than the form in which these electrons are of opposite spin, and it is produced in mutant chloroplasts lacking carotenoids and by leukocytes during metabolic burst.","definition_xrefs":["ISBN:0198506732","GOC:krc","ISBN:0124325653"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to reactive oxygen species","termid":"GO:0000302"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to singlet oxygen","termid":"GO:0000304"}


id: PR:P87308
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- lsb5 gene.","definition_xrefs":["UniProtKB:P87308","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein lsb5 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC31F10.07","synonyms":[{"name":"Spom972h-lsb5","type":"exact"}],"termid":"PR:P87308"}


id: GO:0180063
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A glycoprotein biosynthetic process starting with the covalent linkage of an arabinose via a beta-glycosidic bond to the oxygen atom of the hydroxyl group of a hydroxyproline in a protein, which can be further elongated with the sequential addition of sugar units resulting in the formation of a protein O-linked glycan.","definition_xrefs":["PMID:33815452"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein O-linked glycosylation","termid":"GO:0006493"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein O-linked glycosylation via arabinose","synonyms":[{"name":"protein O-linked arabinosylation","type":"related"}],"termid":"GO:0180063"}


id: PR:Q9URY8
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A chloride anion exchanger that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO02282"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfate permease C869.05c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC869.05c","secondary_identifiers":["UniProtKB:Q9URY8"],"synonyms":[{"name":"Spom972h-SLC26A3","type":"exact"}],"termid":"PR:Q9URY8"}


id: GO:0044103
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: L-arabinose + NADP+ = L-arabinono-1,4-lactone + NADPH + H+.","definition_xrefs":["PMID:16326697","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"L-arabinose 1-dehydrogenase (NADP+) activity","secondary_identifiers":["EC:1.1.1.376"],"termid":"GO:0044103"}


id: PBO:0074184
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 38 member 5","termid":"PBO:0074184"}


id: PBO:0069717
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 997, pseudogene","termid":"PBO:0069717"}


id: PBO:0049993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"huntingtin interacting protein 1 related","termid":"PBO:0049993"}


id: PBO:0059159
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MPPED2 antisense RNA 1","termid":"PBO:0059159"}


id: PBO:0047682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"flotillin 1","termid":"PBO:0047682"}


id: MONDO:0030309
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex I deficiency, nuclear type","termid":"MONDO:0100223"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"Leber hereditary optic neuropathy, autosomal recessive","secondary_identifiers":["UMLS:C5543589","MEDGEN:1786310","OMIMPS:619382"],"synonyms":[{"name":"LHONAR","type":"exact"},{"name":"Leber hereditary optic neuropathy, autosomal recessive","type":"exact"}],"termid":"MONDO:0030309","xrefs":{"Monarch":{"xref_id":"0030309"}}}


id: PBO:0043231
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chloride voltage-gated channel 3","termid":"PBO:0043231"}


id: MONDO:0013777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any pseudohypoaldosteronism type 2 in which the cause of the disease is a mutation in the WNK4 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohypoaldosteronism type 2","termid":"MONDO:0019162"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"pseudohypoaldosteronism type 2B","secondary_identifiers":["OMIM:614491","MEDGEN:374457","icd11.foundation:853594829","UMLS:C1840390","Orphanet:88939","GARD:16776","MESH:C564161"],"synonyms":[{"name":"PHA2B","type":"exact"},{"name":"WNK4 pseudohypoaldosteronism type 2","type":"exact"},{"name":"pseudohypoaldosteronism type 2 caused by mutation in WNK4","type":"exact"},{"name":"pseudohypoaldosteronism, type 2B","type":"related"},{"name":"pseudohypoaldosteronism, type IIB","type":"related"}],"termid":"MONDO:0013777","xrefs":{"Monarch":{"xref_id":"0013777"}}}


id: FYPO:0007667
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the tip of a shmoo, or mating projection, is decreased.","definition_xrefs":["PMID:9606213","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to shmoo tip","termid":"FYPO:0004802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000138","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased protein localization to shmoo tip","synonyms":[{"name":"increased protein localisation to shmoo tip","type":"exact"},{"name":"increased protein localization to mating projection tip","type":"exact"}],"termid":"FYPO:0007667"}


id: MONDO:0006859
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A benign or low malignant potential cystic epithelial neoplasm composed of cells which contain intracytoplasmic mucin. It may arise from the ovary, pancreas, appendix, and lung.","definition_xrefs":["NCIT:C2973"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cystadenoma","termid":"MONDO:0002369"},{"relation_name":"is_a","term_name":"mucinous neoplasm","termid":"MONDO:0024338"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucinous cystadenoma","secondary_identifiers":["EFO:1001048","ICDO:8470/0","MEDGEN:8222","MESH:D018291","UMLS:C0010635","ICDO:8480/0"],"synonyms":[{"name":"adenoma, mucinous, benign","type":"exact"},{"name":"mucinous adenoma","type":"exact"},{"name":"mucinous cystadenoma","type":"exact"},{"name":"mucinous cystoma","type":"exact"},{"name":"pseudomucinous cystadenoma","type":"exact"}],"termid":"MONDO:0006859","xrefs":{"Monarch":{"xref_id":"0006859"}}}


id: PBO:0076579
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 3 pseudogene 7","termid":"PBO:0076579"}


id: PBO:0057397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 548f-5","termid":"PBO:0057397"}


id: PBO:0029123
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_swollen_elongated_cell_with_enlarged_nucleus_upon_entry_into_stationary_phase","termid":"PBO:0029123"}


id: PBO:0041785
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calcyphosine like","termid":"PBO:0041785"}


id: PATO:0000422
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A nutritional quality inhering in a bearer by virtue of the bearer's inability to synthesize a particular organic compound required for its growth.","definition_xrefs":["Wikipedia:http://en.wikipedia.org/wiki/Auxotrophic"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trophic quality","termid":"PATO:0000056"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"auxotrophic","termid":"PATO:0000422"}


id: MONDO:0020345
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete presynaptic congenital myasthenic syndrome (obsolete MONDO:0020345)","secondary_identifiers":["Orphanet:98914"],"synonyms":[{"name":"presynaptic congenital myasthenic syndromes","type":"related"}],"termid":"MONDO:0020345","xrefs":{"Monarch":{"xref_id":"0020345"}}}


id: GO:0003330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the rate, frequency, or extent of the controlled release of molecules that form the extracellular matrix, including carbohydrates and glycoproteins by a cell or a group of cells.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of extracellular matrix organization","termid":"GO:1903053"},{"relation_name":"is_a","term_name":"regulation of secretion by cell","termid":"GO:1903530"},{"relation_name":"regulates","term_name":"extracellular matrix constituent secretion","termid":"GO:0070278"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0008150"],"is_obsolete":false,"name":"regulation of extracellular matrix constituent secretion","termid":"GO:0003330"}


id: MONDO:0006835
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A glomerular disorder characterized by the electron microscopic finding of loss of podocyte foot processes. Light microscopic examination does not show glomerular changes. Patients present with proteinuria and nephrotic syndrome.","definition_xrefs":["NCIT:C34844"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"nephrotic syndrome","termid":"MONDO:0005377"},{"relation_name":"is_a","term_name":"glomerulonephritis","termid":"MONDO:0002462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"lipoid nephrosis","secondary_identifiers":["UMLS:C0027721","DOID:10966","MEDGEN:10307","SCTID:44785005","MedDRA:10058325","NANDO:1200720","NANDO:2200112","MESH:D009402","EFO:1001020"],"synonyms":[{"name":"MCNS","type":"related"},{"name":"idiopathic minimal change nephrotic syndrome","type":"related"},{"name":"lipoid nephrosis","type":"exact"},{"name":"minimal change disease","type":"exact"},{"name":"minimal change glomerulonephritis","type":"exact"},{"name":"minimal change glomerulopathy","type":"related"},{"name":"minimal change nephropathy","type":"exact"},{"name":"minimal change nephrotic syndrome","type":"related"},{"name":"nephrotic syndrome with lesion of minimal change glomerulonephritis","type":"related"},{"name":"nephrotic syndrome with lesion of minimal change nephrotic syndrome","type":"related"},{"name":"nil disease","type":"exact"}],"termid":"MONDO:0006835","xrefs":{"Monarch":{"xref_id":"0006835"}}}


id: MOD:01655
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that is produced by reaction with 5-dimethylaminonaphthalene-1-sulfonyl chloride, dansyl chloride, to form an alpha-amino-Dansyl-derivatized residue.","definition_xrefs":["Unimod:139#N-term"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dansyl chloride derivatized residue","termid":"MOD:01653"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha-amino-Dansyl derivatized residue","synonyms":[{"name":"5-dimethylaminonaphthalene-1-sulfonyl","type":"related"},{"name":"Dansyl","type":"related"},{"name":"N2DansylRes","type":"exact"}],"termid":"MOD:01655"}


id: GO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated a ligand binding to an alpha-type platelet-derived growth factor receptor (PDGFalpha) on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:10372961","GOC:bf","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"platelet-derived growth factor receptor signaling pathway","termid":"GO:0048008"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"platelet-derived growth factor receptor-alpha signaling pathway","synonyms":[{"name":"PDGF receptor-alpha signaling pathway","type":"exact"},{"name":"PDGFR-alpha signaling pathway","type":"related"},{"name":"alphaPDGF receptor signaling pathway","type":"exact"},{"name":"platelet-derived growth factor receptor-alpha signalling pathway","type":"exact"}],"termid":"GO:0035790"}


id: GO:0099572
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A network of proteins within and adjacent to the postsynaptic membrane. Its major components include neurotransmitter receptors and the proteins that spatially and functionally organize them such as anchoring and scaffolding molecules, signaling enzymes and cytoskeletal components.","definition_xrefs":["PMID:22046028"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle","termid":"GO:0043226"},{"relation_name":"part_of","term_name":"postsynapse","termid":"GO:0098794"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"postsynaptic specialization","termid":"GO:0099572"}


id: GO:0042818
data:
  {"annotated_genes":["SJAG_00707","SJAG_01881"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89732],"is_not":false,"summary":null,"term":"GO:0042818"},{"annotations":[113878],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0010144"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving 4-(aminomethyl)-5-(hydroxymethyl)-2-methylpyridin-3-ol, one of the vitamin B6 compounds. Pyridoxal, pyridoxamine and pyridoxine are collectively known as vitamin B6, and are efficiently converted to the biologically active form of vitamin B6, pyridoxal phosphate.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 metabolic process","termid":"GO:0042816"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00707":null,"SJAG_01881":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"pyridoxamine metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"pyridoxamine metabolism","type":"exact"}],"termid":"GO:0042818","terms_by_termid":{"GO:0010144":null,"GO:0042818":null}}


id: MONDO:0001677
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete Rift valley fever (obsolete MONDO:0001677)","termid":"MONDO:0001677","xrefs":{"Monarch":{"xref_id":"0001677"}}}


id: PBO:0114662
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER oxidoreductase Pbr1, implicated in lipid metabolism, or protein glycosylation","termid":"PBO:0114662"}


id: PBO:0066052
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAP2B, member of RAS oncogene family","termid":"PBO:0066052"}


id: PBO:0029245
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_after_spore_germination,_without_cell_division,_with_swollen,_branched,_elongated_germ_tube","termid":"PBO:0029245"}


id: PBO:0057435
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 552","termid":"PBO:0057435"}


id: PBO:0018279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Noc2p-Noc3p complex subunit Noc3","termid":"PBO:0018279"}


id: FYPO:0004770
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of L-glutamine measured in the vacuole is higher than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased level of substance in vacuole","termid":"FYPO:0001730"},{"relation_name":"is_a","term_name":"increased cellular glutamine level","termid":"FYPO:0006955"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased vacuolar glutamine level","synonyms":[{"name":"increased level of glutamine in vacuole","type":"exact"},{"name":"increased vacuolar L-glutamine level","type":"exact"},{"name":"increased vacuolar glutamine level during mitotic cell cycle","type":"related"},{"name":"increased vacuolar glutamine level during vegetative growth","type":"exact"}],"termid":"FYPO:0004770"}


id: PBO:0031495
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_oxidative_stress","termid":"PBO:0031495"}


id: GO:0047571
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3-oxosteroid + acceptor = a 3-oxo-D1-steroid + reduced acceptor.","definition_xrefs":["EC:1.3.99.4"],"direct_ancestors":[{"relation_name":"is_a","term_name":"steroid dehydrogenase activity, acting on the CH-CH group of donors","termid":"GO:0033765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"3-oxosteroid 1-dehydrogenase activity","secondary_identifiers":["MetaCyc:3-OXOSTEROID-1-DEHYDROGENASE-RXN","RHEA:13329"],"synonyms":[{"name":"1-ene-dehydrogenase activity","type":"related"},{"name":"3-ketosteroid-1-en-dehydrogenase activity","type":"related"},{"name":"3-ketosteroid-delta1-dehydrogenase activity","type":"related"},{"name":"3-oxosteroid delta1-dehydrogenase activity","type":"related"},{"name":"3-oxosteroid:(2,6-dichlorphenolindophenol) delta1-oxidoreductase activity","type":"related"},{"name":"3-oxosteroid:(acceptor) delta1-oxidoreductase activity","type":"related"},{"name":"3-oxosteroid:acceptor delta1-oxidoreductase activity","type":"related"},{"name":"4-en-3-oxosteroid:(acceptor)-1-en-oxido-reductase activity","type":"related"},{"name":"delta1-dehydrogenase activity","type":"related"},{"name":"delta1-steroid reductase activity","type":"related"}],"termid":"GO:0047571"}


id: PBO:0053230
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leucine rich repeat containing G protein-coupled receptor 6","termid":"PBO:0053230"}


id: PBO:0036190
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_phosphorylation_during_vegetative_growth","termid":"PBO:0036190"}


id: SO:0001397
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A post translationally modified phenylalanine amino acid feature.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"modified_amino_acid_feature","termid":"SO:0001385"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"modified_L_phenylalanine","secondary_identifiers":["MOD:00914"],"synonyms":[{"name":"ModPhe","type":"exact"},{"name":"modified L phenylalanine","type":"exact"},{"name":"modified L-phenylalanine","type":"exact"}],"termid":"SO:0001397"}


id: GO:1901800
data:
  {"annotated_genes":["SJAG_00642","SJAG_04477","SJAG_01131","SJAG_00766","SJAG_00071","SJAG_01210","SJAG_02723","SJAG_01544","SJAG_01489","SJAG_03048","SJAG_00712","SJAG_03699"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[62486,66919,68572,69078,70055,70562],"is_not":false,"summary":null,"term":"GO:1901800"},{"annotations":[90952],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905786"},{"annotations":[104399,113768,119138,108690,110935],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0032436"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of proteasomal protein catabolic process.","definition_xrefs":["GOC:TermGenie","GOC:rl","GOC:BHF","PMID:21669198"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of protein catabolic process","termid":"GO:0045732"},{"relation_name":"is_a","term_name":"regulation of proteasomal protein catabolic process","termid":"GO:0061136"},{"relation_name":"is_a","term_name":"positive regulation of proteolysis involved in protein catabolic process","termid":"GO:1903052"},{"relation_name":"positively_regulates","term_name":"proteasomal protein catabolic process","termid":"GO:0010498"}],"gene_count":12,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_00642":null,"SJAG_00712":null,"SJAG_00766":null,"SJAG_01131":null,"SJAG_01210":null,"SJAG_01489":null,"SJAG_01544":null,"SJAG_02723":null,"SJAG_03048":null,"SJAG_03699":null,"SJAG_04477":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0030163"},{"rel_name":"regulates","termid":"GO:0030163"}],"interesting_parent_ids":["GO:0008150","GO:0030163"],"is_obsolete":false,"name":"positive regulation of proteasomal protein catabolic process","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"synonyms":[{"name":"activation of proteasomal protein catabolic process","type":"narrow"},{"name":"activation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"activation of proteasome-mediated protein catabolism","type":"exact"},{"name":"positive regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"positive regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"up regulation of proteasomal protein catabolic process","type":"exact"},{"name":"up regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"up regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"up-regulation of proteasomal protein catabolic process","type":"exact"},{"name":"up-regulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"up-regulation of proteasome-mediated protein catabolism","type":"exact"},{"name":"upregulation of proteasomal protein catabolic process","type":"exact"},{"name":"upregulation of proteasome-mediated protein catabolic process","type":"exact"},{"name":"upregulation of proteasome-mediated protein catabolism","type":"exact"}],"termid":"GO:1901800","terms_by_termid":{"GO:0032436":null,"GO:1901800":null,"GO:1905786":null}}


id: GO:0001963
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The vesicular release of dopamine. from a presynapse, across a chemical synapse, the subsequent activation of dopamine receptors at the postsynapse of a target cell (neuron, muscle, or secretory cell) and the effects of this activation on the postsynaptic membrane potential and ionic composition of the postsynaptic cytosol. This process encompasses both spontaneous and evoked release of neurotransmitter and all parts of synaptic vesicle exocytosis. Evoked transmission starts with the arrival of an action potential at the presynapse.","definition_xrefs":["GOC:dph","GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"chemical synaptic transmission","termid":"GO:0007268"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"synaptic transmission, dopaminergic","synonyms":[{"name":"dopaminergic synaptic transmission","type":"exact"}],"termid":"GO:0001963"}


id: PBO:0051313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR2-9 (pseudogene)","termid":"PBO:0051313"}


id: PR:Q1MTQ1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- tea2 gene.","definition_xrefs":["UniProtKB:Q1MTQ1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"kinesin-like protein tea2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1604.20c","synonyms":[{"name":"Spom972h-tea2","type":"exact"},{"name":"Tip elongation aberrant protein 2 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"kinesin-like protein 4 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q1MTQ1"}


id: PBO:0060907
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neurogenin 2","termid":"PBO:0060907"}


id: GO:0009104
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of lipopolysaccharides, any of a group of related, structurally complex components of the outer membrane of Gram-negative bacteria.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide metabolic process","termid":"GO:0008653"},{"relation_name":"is_a","term_name":"macromolecule catabolic process","termid":"GO:0009057"},{"relation_name":"is_a","term_name":"lipid catabolic process","termid":"GO:0016042"},{"relation_name":"is_a","term_name":"carbohydrate derivative catabolic process","termid":"GO:1901136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide catabolic process","synonyms":[{"name":"LPS catabolic process","type":"exact"},{"name":"lipopolysaccharide breakdown","type":"exact"},{"name":"lipopolysaccharide catabolism","type":"exact"},{"name":"lipopolysaccharide degradation","type":"exact"}],"termid":"GO:0009104"}


id: GO:0030868
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The lipid bilayer surrounding the smooth endoplasmic reticulum.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endoplasmic reticulum membrane","termid":"GO:0005789"},{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"smooth endoplasmic reticulum","termid":"GO:0005790"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005783"},{"rel_name":"is_a","termid":"GO:0005789"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005575","GO:0005783","GO:0005789","GO:0005737"],"is_obsolete":false,"name":"smooth endoplasmic reticulum membrane","secondary_identifiers":["NIF_Subcellular:sao1596955044"],"synonyms":[{"name":"SER membrane","type":"exact"},{"name":"smooth ER membrane","type":"exact"}],"termid":"GO:0030868"}


id: PBO:0001429
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Lap-Emerin-Man domain protein","termid":"PBO:0001429"}


id: MONDO:0004249
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma that arises from the supratentorial region of the brain and occurs during childhood.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"supratentorial cancer","termid":"MONDO:0002071"},{"relation_name":"is_a","term_name":"childhood ependymoma","termid":"MONDO:0003478"},{"relation_name":"is_a","term_name":"childhood malignant neoplasm","termid":"MONDO:0006517"},{"relation_name":"is_a","term_name":"supratentorial ependymal tumor","termid":"MONDO:0020687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"pediatric supratentorial ependymoma","secondary_identifiers":["DOID:7502","EFO:0008495","MEDGEN:78854","NCIT:C9043","UMLS:C0278650"],"synonyms":[{"name":"childhood supratentorial ependymoma","type":"exact"},{"name":"paediatric cerebral ependymoma","type":"exact"},{"name":"paediatric supratentorial ependymoblastoma","type":"exact"},{"name":"pediatric cerebral ependymoma","type":"exact"},{"name":"pediatric supratentorial ependymoblastoma","type":"exact"},{"name":"supratentorial ependymoma","type":"broad"}],"termid":"MONDO:0004249","xrefs":{"Monarch":{"xref_id":"0004249"}}}


id: PBO:0027324
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mitochondria_present_in_normal_numbers","termid":"PBO:0027324"}


id: GO:0009247
data:
  {"annotated_genes":["SJAG_06425","SJAG_02776","SJAG_04119","SJAG_01227","SJAG_04878","SJAG_01570","SJAG_02168","SJAG_04975","SJAG_02913","SJAG_04913","SJAG_03878","SJAG_05278","SJAG_02903","SJAG_02804","SJAG_03506","SJAG_03292","SJAG_03672","SJAG_03953","SJAG_06383","SJAG_04337","SJAG_04881","SJAG_03115","SJAG_05311","SJAG_00295","SJAG_04231","SJAG_05219","SJAG_02488","SJAG_05327","SJAG_02523","SJAG_04165","SJAG_04924","SJAG_03066","SJAG_00068","SJAG_03015","SJAG_00831","SJAG_01416","SJAG_00506","SJAG_01860","SJAG_00846","SJAG_03801"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[105785,64685,119887,98441],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0180047"},{"annotations":[58837,58410,78325,89437,91563,77438,105786,64555,71777,64762,105724,79415,74816,75093,80217,63642,77453,75410,78373,76919,58823,95006,79618,73841,61500,79426,79588,79105,58662,79842],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006506"},{"annotations":[77419,93820,97158,99513,114594,81429,97266],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051999"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of glycolipid, a class of 1,2-di-O-acylglycerols joined at oxygen 3 by a glycosidic linkage to a carbohydrate part (usually a mono-, di- or tri-saccharide).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid metabolic process","termid":"GO:0006664"},{"relation_name":"is_a","term_name":"membrane lipid biosynthetic process","termid":"GO:0046467"},{"relation_name":"is_a","term_name":"carbohydrate derivative biosynthetic process","termid":"GO:1901137"}],"gene_count":40,"genes_by_uniquename":{"SJAG_00068":null,"SJAG_00295":null,"SJAG_00506":null,"SJAG_00831":null,"SJAG_00846":null,"SJAG_01227":null,"SJAG_01416":null,"SJAG_01570":null,"SJAG_01860":null,"SJAG_02168":null,"SJAG_02488":null,"SJAG_02523":null,"SJAG_02776":null,"SJAG_02804":null,"SJAG_02903":null,"SJAG_02913":null,"SJAG_03015":null,"SJAG_03066":null,"SJAG_03115":null,"SJAG_03292":null,"SJAG_03506":null,"SJAG_03672":null,"SJAG_03801":null,"SJAG_03878":null,"SJAG_03953":null,"SJAG_04119":null,"SJAG_04165":null,"SJAG_04231":null,"SJAG_04337":null,"SJAG_04878":null,"SJAG_04881":null,"SJAG_04913":null,"SJAG_04924":null,"SJAG_04975":null,"SJAG_05219":null,"SJAG_05278":null,"SJAG_05311":null,"SJAG_05327":null,"SJAG_06383":null,"SJAG_06425":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"glycolipid biosynthetic process","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000041":null,"GO_REF:0000107":null},"secondary_identifiers":["MetaCyc:PWY-401"],"synonyms":[{"name":"glycolipid anabolism","type":"exact"},{"name":"glycolipid biosynthesis","type":"exact"},{"name":"glycolipid formation","type":"exact"},{"name":"glycolipid synthesis","type":"exact"}],"termid":"GO:0009247","terms_by_termid":{"GO:0006506":null,"GO:0051999":null,"GO:0180047":null}}


id: MONDO:0008898
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Camptodactyly syndrome, Guadalajara type 1 is a rare syndrome consisting of growth retardation, facial dysmorphism, camptodactyly and skeletal anomalies.","definition_xrefs":["Orphanet:1327"],"direct_ancestors":[{"relation_name":"is_a","term_name":"camptodactyly syndrome, Guadalajara","termid":"MONDO:0000111"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly syndrome, Guadalajara type 1","secondary_identifiers":["UMLS:C1859359","MEDGEN:395241","GARD:1067","SCTID:720602007","MESH:C537970","OMIM:211910"],"synonyms":[{"name":"FTSS","type":"related"},{"name":"GCS 1","type":"related"},{"name":"GCS1","type":"related"},{"name":"camptodactyly syndrome Guadalajara type 1","type":"related"},{"name":"camptodactyly syndrome, Guadalajara, type 1","type":"related"},{"name":"camptodactyly syndrome, Guadalajara, type I","type":"related"},{"name":"faciothoracoskeletal syndrome","type":"related"}],"termid":"MONDO:0008898","xrefs":{"Monarch":{"xref_id":"0008898"}}}


id: PBO:0002106
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"karyopherin Kap95","termid":"PBO:0002106"}


id: MONDO:0009573
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"megaepiphyseal dwarfism","secondary_identifiers":["OMIM:249230","MEDGEN:383654","MESH:C536140","UMLS:C1855310"],"synonyms":[{"name":"megaepiphyseal dwarfism","type":"exact"}],"termid":"MONDO:0009573","xrefs":{"Monarch":{"xref_id":"0009573"}}}


id: PBO:0045337
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dedicator of cytokinesis 10","termid":"PBO:0045337"}


id: MOD:00675
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively either removes neutral hydrogen atoms (proton and electron), or adds oxygen atoms to a residue with or without the removal of hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification categorized by chemical process","termid":"MOD:01156"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxidized residue","synonyms":[{"name":"OxRes","type":"exact"}],"termid":"MOD:00675"}


id: PBO:0065136
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein kinase cAMP-dependent X-linked catalytic subunit","termid":"PBO:0065136"}


id: PBO:0064972
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PRAME family member 28, pseudogene","termid":"PBO:0064972"}


id: GO:0016893
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of ester linkages within nucleic acids by creating internal breaks to yield 5'-phosphomonoesters.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters (obsolete GO:0016893)","synonyms":[{"name":"5'-endonuclease activity","type":"exact"},{"name":"endoribonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters","type":"related"}],"termid":"GO:0016893"}


id: PBO:0027297
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-fragmented_septum","termid":"PBO:0027297"}


id: GO:0098831
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A specialized region below the presynaptic membrane, characterized by electron-dense material, a specialized cytoskeletal matrix and accumulated (associated) synaptic vesicles.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cortex region","termid":"GO:0099738"},{"relation_name":"part_of","term_name":"presynaptic active zone","termid":"GO:0048786"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005938"},{"rel_name":"part_of","termid":"GO:0005938"}],"interesting_parent_ids":["GO:0005938","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"presynaptic active zone cytoplasmic component","synonyms":[{"name":"cortex of presynaptic active zone","type":"exact"},{"name":"presynaptic zone cortex","type":"exact"}],"termid":"GO:0098831"}


id: GO:2000960
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of cellooligosaccharide metabolic process.","definition_xrefs":["GOC:mengo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of cellooligosaccharide metabolic process (obsolete GO:2000960)","synonyms":[{"name":"regulation of cellooligosaccharide metabolism","type":"exact"}],"termid":"GO:2000960"}


id: PBO:0073999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC25A5 antisense RNA 1","termid":"PBO:0073999"}


id: PBO:0031612
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_rate_of_vacuolar_transport","termid":"PBO:0031612"}


id: PBO:0032709
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_error-free_translesion_synthesis_of_pyrimidine-pyrimidone_6-4_photoproducts","termid":"PBO:0032709"}


id: GO:0039633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process mediated by a virus that results in the death of a cell in the host organism.","definition_xrefs":["GOC:bf","GOC:bm","GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete killing by virus of host cell (obsolete GO:0039633)","synonyms":[{"name":"killing by phage of host cells","type":"narrow"},{"name":"killing by virus of host cells","type":"exact"}],"termid":"GO:0039633"}


id: PBO:0080847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Y-box binding protein 2","termid":"PBO:0080847"}


id: MONDO:0006237
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A tumor mass composed of myeloblasts, neutrophils and neutrophil precursors. Granulocytic sarcoma is the most common type of myeloid sarcoma. (WHO, 2001)","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myeloid sarcoma","termid":"MONDO:0006861"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005570","MONDO:0004992"],"is_obsolete":false,"name":"granulocytic sarcoma","secondary_identifiers":["EFO:1000286","UMLS:C0152276","NCIT:C35815","MEDGEN:56275"],"synonyms":[{"name":"granulocytic sarcoma","type":"exact"},{"name":"sarcoma, granulocytic, malignant","type":"exact"}],"termid":"MONDO:0006237","xrefs":{"Monarch":{"xref_id":"0006237"}}}


id: MONDO:0011302
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inherited susceptibility or predisposition to developing type 1 diabetes mellitus that has material basis in mutation of the locus at chromosome 10q25.","definition_xrefs":["MONDO:patterns/inherited_susceptibility","PMID:9788970","DOID:0110754"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"type 1 diabetes mellitus","termid":"MONDO:0005147"},{"relation_name":"is_a","term_name":"diabetes mellitus, insulin-dependent, X-linked, susceptibility to","termid":"MONDO:0010255"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"type 1 diabetes mellitus 17","secondary_identifiers":["MESH:C566395","MEDGEN:351036","OMIM:603266","UMLS:C1864068"],"synonyms":[{"name":"IDDM17","type":"exact"},{"name":"diabetes mellitus, insulin-dependent, 17","type":"related"},{"name":"insulin-dependent diabetes mellitus 17","type":"exact"}],"termid":"MONDO:0011302","xrefs":{"Monarch":{"xref_id":"0011302"}}}


id: MONDO:0020298
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Prader-Willi syndrome","termid":"MONDO:0008300"},{"relation_name":"is_a","term_name":"chromosome 15 disorder","termid":"MONDO:0700022"},{"relation_name":"is_a","term_name":"uniparental disomy","termid":"MONDO:0700086"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0002320"],"is_obsolete":false,"name":"Prader-Willi syndrome due to maternal uniparental disomy of chromosome 15","secondary_identifiers":["Orphanet:98754","GARD:16861","MEDGEN:1826079","UMLS:C5680343"],"synonyms":[{"name":"Prader-Willi syndrome due to maternal uniparental disomy of chromosome type 15","type":"exact"},{"name":"UPD(15)mat","type":"exact"}],"termid":"MONDO:0020298","xrefs":{"Monarch":{"xref_id":"0020298"}}}


id: MONDO:0014656
data:
  {"annotated_genes":["SJAG_06022"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87102],"is_not":false,"summary":null,"term":"MONDO:0014656"}]},"cv_name":"mondo","definition":"Any progressive external ophthalmoplegia with mitochondrial DNA deletions in which the cause of the disease is a mutation in the RNASEH1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive external ophthalmoplegia with mitochondrial DNA deletions","termid":"MONDO:0000090"},{"relation_name":"is_a","term_name":"adult-onset chronic progressive external ophthalmoplegia with mitochondrial myopathy","termid":"MONDO:0018002"}],"gene_count":1,"genes_by_uniquename":{"SJAG_06022":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0004069"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0004069","MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 2","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:616479","DOID:0111515","GARD:18450","UMLS:C4225312","MEDGEN:901897"],"synonyms":[{"name":"PEOB2","type":"related"},{"name":"RNASEH1 progressive external ophthalmoplegia with mitochondrial DNA deletions","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions caused by mutation in RNASEH1","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive 2","type":"exact"},{"name":"progressive external ophthalmoplegia with mitochondrial DNA deletions, autosomal recessive type 2","type":"exact"},{"name":"progressive external ophthalmoplegia, autosomal recessive 2","type":"related"}],"termid":"MONDO:0014656","terms_by_termid":{"MONDO:0014656":null},"xrefs":{"Monarch":{"xref_id":"0014656"}}}


id: PBO:0041275
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"C1q and TNF related 2","termid":"PBO:0041275"}


id: PBO:0089539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"plasma membrane calcium ion transmembrane transporter","termid":"PBO:0089539"}


id: MONDO:0020500
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Marburg hemorrhagic fever (MHF), caused by Marburg virus, is a severe viral hemorrhagic disease characterized by initial fever and malaise followed by gastrointestinal symptoms, bleeding, shock, and multi-organ system failure.","definition_xrefs":["Orphanet:99826"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Filoviridae infectious disease","termid":"MONDO:0005762"},{"relation_name":"is_a","term_name":"viral hemorrhagic fever","termid":"MONDO:0018087"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Marburg hemorrhagic fever","secondary_identifiers":["ICD9:078.89","ICD10CM:A98.3","MEDGEN:9888","SCTID:77503002","icd11.foundation:696598707","MedDRA:10026822","DOID:4327","UMLS:C0024788","NCIT:C84883","EFO:0007358","GARD:9444","MESH:D008379"],"synonyms":[{"name":"Green monkey disease","type":"exact"},{"name":"MHF","type":"exact"},{"name":"Marburg disease","type":"exact"},{"name":"Marburg virus disease","type":"exact"}],"termid":"MONDO:0020500","xrefs":{"Monarch":{"xref_id":"0020500"}}}


id: GO:0046579
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of Ras protein signal transduction.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of Ras protein signal transduction","termid":"GO:0046578"},{"relation_name":"is_a","term_name":"positive regulation of small GTPase mediated signal transduction","termid":"GO:0051057"},{"relation_name":"positively_regulates","term_name":"Ras protein signal transduction","termid":"GO:0007265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of Ras protein signal transduction","secondary_identifiers":["Reactome:R-HSA-9034864","Reactome:R-HSA-9027284","Reactome:R-HSA-9026519"],"synonyms":[{"name":"activation of Ras protein signal transduction","type":"narrow"},{"name":"stimulation of Ras protein signal transduction","type":"narrow"},{"name":"up regulation of Ras protein signal transduction","type":"exact"},{"name":"up-regulation of Ras protein signal transduction","type":"exact"},{"name":"upregulation of Ras protein signal transduction","type":"exact"}],"termid":"GO:0046579"}


id: GO:0060849
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of transcription from an RNA polymerase II promoter that contributes to the commitment of a venous endothelial cell to a lymphatic endothelial cell.","definition_xrefs":["GOC:tb","GOC:sdb_2009","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription involved in lymphatic endothelial cell fate commitment (obsolete GO:0060849)","termid":"GO:0060849"}


id: GO:0052752
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: reduced coenzyme F420 + CoB-S-S-CoM = coenzyme F420 + CoM-SH + CoB-SH.","definition_xrefs":["GOC:mengo_curators","PMID:9914308"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on a sulfur group of donors","termid":"GO:0016667"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"reduced coenzyme F420:heterodisulfide oxidoreductase activity","synonyms":[{"name":"F420-dependent heterodisulfide oxidoreductase activity","type":"exact"},{"name":"F420H2:heterodisulfide oxidoreductase activity","type":"exact"},{"name":"coenzyme F420-dependent heterodisulfide oxidoreductase activity","type":"exact"}],"termid":"GO:0052752"}


id: PBO:0088487
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA translocase/ SUMO-targeted ubiquitin ligase E3","termid":"PBO:0088487"}


id: PBO:0085574
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved DNA double-strand break repair; repairs breaks in DNA during vegetative growth via recombination and single-strand annealing; anneals complementary single-stranded DNA; forms nuclear foci upon DNA replication stress; required for loading of Rad52p to DSBs; regulates replication fork progression in DNA ligase I-deficient cells; paralog of Rad52p","termid":"PBO:0085574"}


id: FYPO:0002480
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an elongated germ tube, and subsequently forms a viable dividing cell.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viable elongated vegetative cell","termid":"FYPO:0001492"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0001985","FYPO:0000004"],"is_obsolete":false,"name":"viable after spore germination with elongated germ tube","synonyms":[{"name":"viable following spore germination with elongated germ tube","type":"exact"},{"name":"viable germinated spore with elongated germ tube","type":"exact"}],"termid":"FYPO:0002480"}


id: GO:0043248
data:
  {"annotated_genes":["SJAG_04290","SJAG_04197","SJAG_01652","SJAG_04844","SJAG_04602","SJAG_02570","SJAG_00954","SJAG_00126"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[58946,59975,63501,106361],"is_not":false,"summary":null,"term":"GO:0043248"},{"annotations":[116904],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0080129"},{"annotations":[101496,82030,117799],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070682"}]},"cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a mature, active proteasome complex.","definition_xrefs":["PMID:10872471","GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00126":null,"SJAG_00954":null,"SJAG_01652":null,"SJAG_02570":null,"SJAG_04197":null,"SJAG_04290":null,"SJAG_04602":null,"SJAG_04844":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0065003"},{"rel_name":"part_of","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0008150","GO:0065003","GO:0044085"],"is_obsolete":false,"name":"proteasome assembly","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-9907900"],"synonyms":[{"name":"26S proteasome assembly","type":"narrow"},{"name":"proteasome complex assembly","type":"exact"},{"name":"proteasome maturation","type":"exact"}],"termid":"GO:0043248","terms_by_termid":{"GO:0043248":null,"GO:0070682":null,"GO:0080129":null}}


id: GO:0006497
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The covalent attachment of lipid groups to an amino acid in a protein.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein modification process","termid":"GO:0036211"},{"relation_name":"part_of","term_name":"lipoprotein biosynthetic process","termid":"GO:0042158"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0042158"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0042158","GO:0008150"],"is_obsolete":false,"name":"protein lipidation","secondary_identifiers":["RESID:AA0160","RESID:AA0223","RESID:AA0060","RESID:AA0080","RESID:AA0078","GO:0042050","RESID:AA0059","RESID:AA0079","RESID:AA0077","RESID:AA0102","RESID:AA0103","RESID:AA0307","RESID:AA0308","RESID:AA0309","RESID:AA0161","RESID:AA0316","RESID:AA0163","RESID:AA0104","RESID:AA0107","RESID:AA0159","RESID:AA0158","RESID:AA0162","RESID:AA0106","RESID:AA0166","RESID:AA0290"],"synonyms":[{"name":"lipid:protein modification","type":"exact"},{"name":"protein amino acid lipidation","type":"exact"}],"termid":"GO:0006497"}


id: PBO:0045704
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dual specificity tyrosine phosphorylation regulated kinase 3","termid":"PBO:0045704"}


id: MONDO:0859238
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypoalphalipoproteinemia, primary, 2","termid":"MONDO:0032766"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypoalphalipoproteinemia, primary, 2, intermediate","secondary_identifiers":["OMIM:619836","UMLS:C5677030","MEDGEN:1801755"],"termid":"MONDO:0859238","xrefs":{"Monarch":{"xref_id":"0859238"}}}


id: PR:Q10281
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A guanine nucleotide-binding protein subunit beta-2-like 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO01018","PANTHER:PTHR19868:SF0"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanine nucleotide-binding protein subunit beta-like protein (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6B12.15","secondary_identifiers":["UniProtKB:Q10281"],"synonyms":[{"name":"Spom972h-GNB2L1","type":"exact"},{"name":"receptor of activated protein kinase C (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q10281"}


id: PBO:0060871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"negative elongation factor complex member C/D","termid":"PBO:0060871"}


id: GO:1990030
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Ramification of basket cell axon surrounding cell bodies, forming the characteristic pericellular baskets from which the cell class derives its name.","definition_xrefs":["NIF_Subcellular:sao413722576"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"axon","termid":"GO:0030424"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"pericellular basket","synonyms":[{"name":"peri cellular basket","type":"exact"},{"name":"peri-cellular basket","type":"exact"}],"termid":"GO:1990030"}


id: SO:0000837
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of UTR.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mRNA_region","termid":"SO:0000836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UTR_region","synonyms":[{"name":"UTR region","type":"exact"}],"termid":"SO:0000837"}


id: PR:O74541
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC777.02 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O74541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C777.02 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC777.02","synonyms":[{"name":"Spom972h-SPCC777.02","type":"exact"}],"termid":"PR:O74541"}


id: GO:0004146
data:
  {"annotated_genes":["SJAG_01198"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[73024],"is_not":false,"summary":null,"term":"GO:0004146"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: 5,6,7,8-tetrahydrofolate + NADP+ = 7,8-dihydrofolate + NADPH + H+.","definition_xrefs":["EC:1.5.1.3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-NH group of donors, NAD or NADP as acceptor","termid":"GO:0016646"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01198":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"dihydrofolate reductase activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-1497794","RHEA:15009","MetaCyc:DIHYDROFOLATEREDUCT-RXN"],"synonyms":[{"name":"5,6,7,8-tetrahydrofolate:NADP+ oxidoreductase activity","type":"related"},{"name":"7,8-dihydrofolate reductase activity","type":"related"},{"name":"DHFR","type":"related"},{"name":"NADPH-dihydrofolate reductase activity","type":"related"},{"name":"dihydrofolate reductase:thymidylate synthase activity","type":"related"},{"name":"dihydrofolate reduction","type":"exact"},{"name":"dihydrofolic acid reductase activity","type":"related"},{"name":"dihydrofolic reductase activity","type":"related"},{"name":"folic acid reductase activity","type":"related"},{"name":"folic reductase activity","type":"related"},{"name":"pteridine reductase:dihydrofolate reductase activity","type":"related"},{"name":"tetrahydrofolate dehydrogenase activity","type":"related"},{"name":"thymidylate synthetase-dihydrofolate reductase activity","type":"related"}],"termid":"GO:0004146","terms_by_termid":{"GO:0004146":null}}


id: PBO:0068392
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ring finger protein 212B","termid":"PBO:0068392"}


id: GO:0032821
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of natural killer cell proliferation as part of an immune response.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of immune effector process","termid":"GO:0002698"},{"relation_name":"is_a","term_name":"negative regulation of natural killer cell proliferation","termid":"GO:0032818"},{"relation_name":"is_a","term_name":"regulation of natural killer cell proliferation involved in immune response","termid":"GO:0032820"},{"relation_name":"is_a","term_name":"negative regulation of immune response","termid":"GO:0050777"},{"relation_name":"negatively_regulates","term_name":"natural killer cell proliferation involved in immune response","termid":"GO:0002324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of natural killer cell proliferation involved in immune response","synonyms":[{"name":"down regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"down-regulation of natural killer cell proliferation during immune response","type":"related"},{"name":"downregulation of natural killer cell proliferation during immune response","type":"related"},{"name":"inhibition of natural killer cell proliferation during immune response","type":"narrow"},{"name":"negative regulation of NK cell proliferation during immune response","type":"related"},{"name":"negative regulation of natural killer cell proliferation during immune response","type":"related"}],"termid":"GO:0032821"}


id: PBO:0078554
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 43B","termid":"PBO:0078554"}


id: GO:0090424
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A phytochelatin metabolic process in which a metal and exogenous sulfur are incorporated with phytochelatin to form a complex.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phytochelatin metabolic process","termid":"GO:0046937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"phytochelatin-metal-sulfur complex formation","synonyms":[{"name":"HWM phytochelatin complex formation","type":"related"},{"name":"high molecular weight phytochelatin complex formation","type":"related"}],"termid":"GO:0090424"}


id: MONDO:0007037
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Achondroplasia is the most common form of chondrodysplasia, characterized by rhizomelia, exaggerated lumbar lordosis, brachydactyly, and macrocephaly with frontal bossing and midface hypoplasia.","definition_xrefs":["Orphanet:15"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with micromelia (obsolete MONDO:0018232)","termid":"MONDO:0018232"},{"relation_name":"is_a","term_name":"osteochondrodysplasia","termid":"MONDO:0005516"},{"relation_name":"is_a","term_name":"FGFR3-related chondrodysplasia","termid":"MONDO:0019685"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"achondroplasia","secondary_identifiers":["NCIT:C34345","DOID:4480","UMLS:C0001080","GARD:8173","icd11.foundation:24224082","OMIM:100800","ICD10CM:Q77.4","NORD:711","SCTID:86268005","NANDO:1200877","MedDRA:10000452","MEDGEN:1289","MESH:D000130","NANDO:2201009"],"synonyms":[{"name":"ACH","type":"exact"},{"name":"achondroplasia","type":"exact"},{"name":"achondroplastic dwarfism","type":"related"},{"name":"achondroplastic physique","type":"exact"},{"name":"chondrodystrophia","type":"exact"}],"termid":"MONDO:0007037","xrefs":{"Monarch":{"xref_id":"0007037"}}}


id: GO:0032361
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of pyridoxal phosphate, pyridoxal phosphorylated at the hydroxymethyl group of C-5, the active form of vitamin B6.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vitamin B6 catabolic process","termid":"GO:0042820"},{"relation_name":"is_a","term_name":"pyridoxal phosphate metabolic process","termid":"GO:0042822"},{"relation_name":"is_a","term_name":"aldehyde catabolic process","termid":"GO:0046185"},{"relation_name":"is_a","term_name":"organophosphate catabolic process","termid":"GO:0046434"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006766"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0006766","GO:0044281"],"is_obsolete":false,"name":"pyridoxal phosphate catabolic process","termid":"GO:0032361"}


id: GO:0033807
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: stearoyl-CoA + malonyl-CoA + 2 NAD(P)H + 2 H+ = icosanoyl-CoA + CO2 + 2 NAD(P)+.","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete icosanoyl-CoA synthase activity (obsolete GO:0033807)","synonyms":[{"name":"C18-CoA elongase activity","type":"related"},{"name":"acyl-CoA elongase activity","type":"related"},{"name":"stearoyl-CoA elongase activity","type":"related"},{"name":"stearoyl-CoA:malonyl-CoA C-acyltransferase (decarboxylating, oxoacyl- and enoyl-reducing) activity","type":"related"}],"termid":"GO:0033807"}


id: GO:0033045
data:
  {"annotated_genes":["SJAG_02332","SJAG_04597","SJAG_01679","SJAG_04699","SJAG_00082","SJAG_01956","SJAG_05329","SJAG_04573","SJAG_01297","SJAG_04259","SJAG_03048","SJAG_02498","SJAG_00460","SJAG_01805","SJAG_04280","SJAG_03353","SJAG_00244","SJAG_02169","SJAG_01082","SJAG_04126","SJAG_01515","SJAG_04999","SJAG_04464","SJAG_04968","SJAG_00145","SJAG_03327","SJAG_05290","SJAG_01837","SJAG_00666","SJAG_02380","SJAG_03126","SJAG_03575","SJAG_00883","SJAG_02336","SJAG_03681","SJAG_01330","SJAG_04884","SJAG_02451","SJAG_04853","SJAG_04140"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101602,92730,117961,110292,105908,116329,115842,109264,114016],"is_not":false,"rel_names":["is_a","regulates","positively_regulates","negatively_regulates"],"summary":null,"term":"GO:1902426"},{"annotations":[108345,116556],"is_not":false,"rel_names":["regulates","negatively_regulates","is_a"],"summary":null,"term":"GO:1905318"},{"annotations":[77330,118730],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:0033316"},{"annotations":[100704,102161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990949"},{"annotations":[102162,104303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[74993,80322,72816],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007091"},{"annotations":[103817,108347,117619,101444,111953,116559],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:0007094"},{"annotations":[104378],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902424"},{"annotations":[100705],"is_not":false,"rel_names":["is_a","negatively_regulates","regulates"],"summary":null,"term":"GO:1902103"},{"annotations":[105296],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:2000816"},{"annotations":[96208],"is_not":false,"rel_names":["regulates","negatively_regulates","positively_regulates","is_a"],"summary":null,"term":"GO:0140499"},{"annotations":[104386],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1902845"},{"annotations":[118069,107208,114017],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902425"},{"annotations":[115847],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:1905326"},{"annotations":[97174],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:1905191"},{"annotations":[118737],"is_not":false,"rel_names":["is_a","regulates","positively_regulates"],"summary":null,"term":"GO:0090267"},{"annotations":[95816,104125,116825,99708,102163,104397,113430],"is_not":false,"rel_names":["positively_regulates","is_a","regulates"],"summary":null,"term":"GO:0045842"},{"annotations":[113256,92010,118740,104398,95817],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140429"},{"annotations":[96423,92011],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1902846"},{"annotations":[113491],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110161"},{"annotations":[103359],"is_not":false,"rel_names":["is_a","regulates"],"summary":null,"term":"GO:1905325"},{"annotations":[113071],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0032888"},{"annotations":[117110],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0110162"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of sister chromatid segregation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of chromosome organization","termid":"GO:0033044"},{"relation_name":"is_a","term_name":"regulation of chromosome segregation","termid":"GO:0051983"},{"relation_name":"regulates","term_name":"sister chromatid 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of sister chromatid segregation","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0033045","terms_by_termid":{"GO:0007091":null,"GO:0007094":null,"GO:0032888":null,"GO:0033316":null,"GO:0045842":null,"GO:0090267":null,"GO:0110161":null,"GO:0110162":null,"GO:0140429":null,"GO:0140499":null,"GO:1902103":null,"GO:1902424":null,"GO:1902425":null,"GO:1902426":null,"GO:1902845":null,"GO:1902846":null,"GO:1905191":null,"GO:1905318":null,"GO:1905325":null,"GO:1905326":null,"GO:1990949":null,"GO:1990950":null,"GO:2000816":null}}


id: PBO:0064483
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase kappa","termid":"PBO:0064483"}


id: PBO:0069211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 466, pseudogene","termid":"PBO:0069211"}


id: PBO:0074551
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA host gene 4","termid":"PBO:0074551"}


id: MONDO:0015651
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neurocutaneous syndrome with epilepsy (obsolete MONDO:0015651)","secondary_identifiers":["Orphanet:166466"],"termid":"MONDO:0015651","xrefs":{"Monarch":{"xref_id":"0015651"}}}


id: FYPO:0007478
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a region of the genome that is normally stably assembled and maintained as heterochromatin over successive generations retains heterochromatic structure for fewer generations than normal.","definition_xrefs":["PMID:29899117","PomBase:mah","PMID:31278118"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal epigenetic heterochromatin inheritance","termid":"FYPO:0007477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0007477"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0007477"],"is_obsolete":false,"name":"decreased epigenetic heterochromatin inheritance","synonyms":[{"name":"decreased PEV","type":"related"},{"name":"decreased epigenetic heterochromatin propagation","type":"exact"},{"name":"epigenetic inheritance of heterochromatin","type":"exact"},{"name":"reduced epigenetic heterochromatin inheritance","type":"exact"}],"termid":"FYPO:0007478"}


id: PBO:0069214
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 469, pseudogene","termid":"PBO:0069214"}


id: GO:0140318
data:
  {"annotated_genes":["SJAG_03415","SJAG_04203","SJAG_01640","SJAG_01179","SJAG_03502","SJAG_03358","SJAG_03560","SJAG_04218","SJAG_05259","SJAG_02077","SJAG_04996","SJAG_01879","SJAG_02330","SJAG_03515","SJAG_02208","SJAG_04208","SJAG_01435","SJAG_00959"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[118329],"is_not":false,"summary":null,"term":"GO:0140318"},{"annotations":[103043,65498,63801],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140567"},{"annotations":[80691,75385,75576,75929,76953,108204,81090,75167,69563,80910],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0008320"},{"annotations":[105302,109603,107218,109626],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0015450"}]},"cv_name":"molecular_function","definition":"Directly binding to a specific protein and delivering it to a specific cellular location.","definition_xrefs":["PMID:18706423"],"direct_ancestors":[{"relation_name":"is_a","term_name":"transporter activity","termid":"GO:0005215"}],"gene_count":18,"genes_by_uniquename":{"SJAG_00959":null,"SJAG_01179":null,"SJAG_01435":null,"SJAG_01640":null,"SJAG_01879":null,"SJAG_02077":null,"SJAG_02208":null,"SJAG_02330":null,"SJAG_03358":null,"SJAG_03415":null,"SJAG_03502":null,"SJAG_03515":null,"SJAG_03560":null,"SJAG_04203":null,"SJAG_04208":null,"SJAG_04218":null,"SJAG_04996":null,"SJAG_05259":null},"genotype_count":0,"in_subsets":["mf_goslim_japonicus"],"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005215"],"is_obsolete":false,"name":"protein transporter activity","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["Reactome:R-HSA-9662818","Reactome:R-HSA-2248891","Reactome:R-HSA-9662747"],"synonyms":[{"name":"protein carrier activity","type":"related"},{"name":"protein transport chaperone","type":"related"}],"termid":"GO:0140318","terms_by_termid":{"GO:0008320":null,"GO:0015450":null,"GO:0140318":null,"GO:0140567":null}}


id: PBO:0047385
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 22","termid":"PBO:0047385"}


id: PBO:0056748
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyltransferase 4, N6-adenosine","termid":"PBO:0056748"}


id: PBO:0081202
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger with KRAB and SCAN domains 3","termid":"PBO:0081202"}


id: MONDO:0021642
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A varicose disease that involves the mammalian vulva.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"},{"relation_name":"is_a","term_name":"pelvic varices","termid":"MONDO:0004869"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vulval varices","secondary_identifiers":["icd11.foundation:53329171","SCTID:48868008","ICD10CM:I86.3","HP:0100677","ICD9:456.6","MEDGEN:510083","UMLS:C0155796"],"synonyms":[{"name":"mammalian vulva varicose disease","type":"exact"},{"name":"varicose disease of mammalian vulva","type":"exact"}],"termid":"MONDO:0021642","xrefs":{"Monarch":{"xref_id":"0021642"}}}


id: GO:0048651
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which individuals that have the potential to develop any of several possible distinct developmental paths have their individual developmental fates determined in response to environmental cues.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to external stimulus","termid":"GO:0009605"},{"relation_name":"is_a","term_name":"polyphenic determination","termid":"GO:0048647"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"polyphenic determination, influence by environmental factors","termid":"GO:0048651"}


id: PBO:0051799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"IQ motif containing GTPase activating protein 1","termid":"PBO:0051799"}


id: GO:0060484
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a lung-associated mesenchyme from an initial condition to its mature state. This process begins with the formation of lung-associated mesenchyme and ends with the mature structure. Lung-associated mesenchyme is the tissue made up of loosely connected mesenchymal cells in the lung.","definition_xrefs":["GOC:mtg_lung","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesenchyme development","termid":"GO:0060485"},{"relation_name":"part_of","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lung-associated mesenchyme development","synonyms":[{"name":"lung mesenchyme development","type":"exact"},{"name":"pulmonary mesenchyme development","type":"exact"}],"termid":"GO:0060484"}


id: PBO:0072071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S12 pseudogene 1","termid":"PBO:0072071"}


id: GO:0071315
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a morphine stimulus. Morphine is an opioid alkaloid, isolated from opium, with a complex ring structure.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to morphine","termid":"GO:0043278"},{"relation_name":"is_a","term_name":"cellular response to isoquinoline alkaloid","termid":"GO:0071317"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to morphine","termid":"GO:0071315"}


id: PBO:0064484
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA polymerase lambda","termid":"PBO:0064484"}


id: PBO:0092001
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced P-specific trancription factor Pc","termid":"PBO:0092001"}


id: PBO:0046837
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"fatty acid binding protein 5 pseudogene 10","termid":"PBO:0046837"}


id: FYPO:0000446
data:
  {"alleles_by_uniquename":{"SJAG_04332:allele-1":{"allele_type":"amino_acid_mutation","description":"I30T,T572P","gene_uniquename":"SJAG_04332","name":"cdc25-D9","uniquename":"SJAG_04332:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121430],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"FYPO:0007701"}]},"cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which progression through the mitotic cell cycle is arrested at the mitotic G2/M phase transition.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle arrest in mitotic interphase","termid":"FYPO:0000837"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04332":null},"genotype_count":1,"genotypes_by_uniquename":{"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type":{"display_name":"cdc25-D9(I30T,T572P aa)","display_uniquename":"cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04332:allele-1","expression":"Not assayed or wild type"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000631"}],"interesting_parent_ids":["FYPO:0000631","FYPO:0000002"],"is_obsolete":false,"name":"cell cycle arrest at mitotic G2/M phase transition","references_by_uniquename":{"PMID:25866389":null},"single_locus_annotated_genes":["SJAG_04332"],"single_locus_genotype_uniquenames":["cdc25-D9-I30T,T572P-amino_acid_mutation-expression-not_assayed_or_wild_type"],"synonyms":[{"name":"cell cycle arrest at mitotic G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"cell cycle arrest at mitotic G2/M phase transition during vegetative growth","type":"exact"},{"name":"cell cycle arrest in mitotic G2 phase","type":"related"},{"name":"mitotic G2 phase arrest","type":"related"},{"name":"mitotic G2/M phase transition arrest","type":"exact"},{"name":"mitotic cell cycle arrest at mitotic G2/M phase transition","type":"exact"},{"name":"mitotic cell cycle progression at mitotic G2/M phase transition: arrested","type":"related"}],"termid":"FYPO:0000446","terms_by_termid":{"FYECO:0000004":null,"FYECO:0000137":null,"FYPO:0007701":null,"FYPO_EXT:0000001":null}}


id: GO:0032068
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A complex consisting of two proteins which acts as an endonuclease in DNA sequences containing a specific modified recognition site. Modifications may include methylation, hydroxymethylation, and glucosyl-hydroxymethylation.","definition_xrefs":["PMID:12654995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"endodeoxyribonuclease complex","termid":"GO:1905347"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005737","GO:0005575"],"is_obsolete":false,"name":"type IV site-specific deoxyribonuclease complex","synonyms":[{"name":"type IV restriction enzyme complex","type":"exact"}],"termid":"GO:0032068"}


id: MONDO:0009456
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"reticular dysgenesis","termid":"MONDO:0009973"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"Immunoerythromyeloid hypoplasia","secondary_identifiers":["OMIM:242880"],"synonyms":[{"name":"Immunoerythromyeloid hypoplasia","type":"exact"}],"termid":"MONDO:0009456","xrefs":{"Monarch":{"xref_id":"0009456"}}}


id: GO:0102767
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (S)-naringenin + S-adenosyl-L-methionine = 2 H+ + ponciretin + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.231","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016741"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016740","GO:0016741"],"is_obsolete":false,"name":"flavanone 4'-O-methyltransferase activity","secondary_identifiers":["MetaCyc:RXN-12719","RHEA:31743"],"termid":"GO:0102767"}


id: PBO:0079037
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon AAC) 6-1","termid":"PBO:0079037"}


id: GO:0010788
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of COPI proteins and adaptor proteins to Golgi membranes during the formation of cis-Golgi to rough ER transport vesicles, forming a vesicle coat.","definition_xrefs":["GOC:dph","GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"COPI coating of Golgi vesicle","termid":"GO:0048205"},{"relation_name":"part_of","term_name":"vesicle targeting, cis-Golgi to rough endoplasmic reticulum","termid":"GO:0048206"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006810"},{"rel_name":"part_of","termid":"GO:0061024"},{"rel_name":"part_of","termid":"GO:0016192"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0061024","GO:0016192"],"is_obsolete":false,"name":"COPI coating of Golgi vesicle, cis-Golgi to rough ER","termid":"GO:0010788"}


id: MONDO:0011714
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"partial lipodystrophy, congenital cataracts, and neurodegeneration syndrome","secondary_identifiers":["OMIM:606721","UMLS:C3807567","GARD:18038","MEDGEN:813897"],"synonyms":[{"name":"LCCNS","type":"related"},{"name":"lipodystrophy, familial partial, type 7","type":"exact"},{"name":"lipodystrophy, partial, with congenital cataracts and neurodegeneration","type":"related"},{"name":"partial lipodystrophy, congenital cataracts, and neurodegeneration syndrome","type":"exact"}],"termid":"MONDO:0011714","xrefs":{"Monarch":{"xref_id":"0011714"}}}


id: PBO:0047409
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F-box protein 47","termid":"PBO:0047409"}


id: PR:O14243
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A sorting nexin-30 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01154","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sorting nexin-4 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC6F6.12","secondary_identifiers":["UniProtKB:O14243"],"synonyms":[{"name":"Spom972h-SNX30","type":"exact"},{"name":"autophagy-related protein 24 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O14243"}


id: GO:1905906
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of amyloid fibril formation.","definition_xrefs":["GOC:aruk","GOC:bc","GOC:TermGenie","PMID:23106396","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of protein metabolic process","termid":"GO:0051246"},{"relation_name":"is_a","term_name":"regulation of supramolecular fiber organization","termid":"GO:1902903"},{"relation_name":"regulates","term_name":"amyloid fibril formation","termid":"GO:1990000"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of amyloid fibril formation","synonyms":[{"name":"regulation of amyloid fibril assembly","type":"related"},{"name":"regulation of amyloid structure assembly","type":"related"},{"name":"regulation of amyloid structure formation","type":"related"}],"termid":"GO:1905906"}


id: PBO:0061313
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nephrocystin 4","termid":"PBO:0061313"}


id: GO:0019126
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The racemization of peptidyl-serine.","definition_xrefs":["RESID:AA0195"],"gene_count":0,"genotype_count":0,"name":"obsolete peptidyl-serine racemization (obsolete GO:0019126)","termid":"GO:0019126"}


id: MONDO:1012264
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"androgen insensitivity syndrome, non-human animal","termid":"MONDO:1011919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"androgen insensitivity syndrome, dog","secondary_identifiers":["OMIA:000991-9615"],"synonyms":[{"name":"AIS, dog","type":"exact"}],"termid":"MONDO:1012264","xrefs":{"Monarch":{"xref_id":"1012264"}}}


id: PR:O59780
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPCC320.03 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59780"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C320.03 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC320.03","synonyms":[{"name":"Spom972h-SPCC320.03","type":"exact"}],"termid":"PR:O59780"}


id: GO:0031091
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A secretory organelle found in blood platelets, which is unique in that it exhibits further compartmentalization and acquires its protein content via two distinct mechanisms: (1) biosynthesis predominantly at the megakaryocyte (MK) level (with some vestigial platelet synthesis) (e.g. platelet factor 4) and (2) endocytosis and pinocytosis at both the MK and circulating platelet levels (e.g. fibrinogen (Fg) and IgG).","definition_xrefs":["PMID:8467233"],"direct_ancestors":[{"relation_name":"is_a","term_name":"secretory granule","termid":"GO:0030141"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0031410","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"platelet alpha granule","secondary_identifiers":["Wikipedia:Platelet_alpha-granule"],"synonyms":[{"name":"platelet alpha-granule","type":"exact"}],"termid":"GO:0031091"}


id: GO:0030747
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: indole-3-pyruvate + S-adenosyl-L-methionine = (R)-3-(indol-3-yl)-2-oxobutanoate + H+ + S-adenosyl-L-homocysteine.","definition_xrefs":["EC:2.1.1.47"],"direct_ancestors":[{"relation_name":"is_a","term_name":"S-adenosylmethionine-dependent methyltransferase activity","termid":"GO:0008757"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016740","GO:0016741","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"indolepyruvate C-methyltransferase activity","secondary_identifiers":["RHEA:12112","MetaCyc:RXN-17530"],"synonyms":[{"name":"S-adenosyl-L-methionine:(indol-3-yl)pyruvate C-methyltransferase activity","type":"related"},{"name":"S-adenosyl-L-methionine:indolepyruvate C-methyltransferase activity","type":"related"},{"name":"indolepyruvate 3-methyltransferase activity","type":"related"},{"name":"indolepyruvate methyltransferase activity","type":"related"},{"name":"indolepyruvic acid methyltransferase activity","type":"related"}],"termid":"GO:0030747"}


id: GO:1902338
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of apoptotic process involved in morphogenesis.","definition_xrefs":["GOC:sart","GOC:TermGenie","PMID:12202035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of apoptotic process involved in morphogenesis","termid":"GO:1902337"},{"relation_name":"is_a","term_name":"negative regulation of apoptotic process involved in development","termid":"GO:1904746"},{"relation_name":"negatively_regulates","term_name":"apoptotic process involved in morphogenesis","termid":"GO:0060561"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of apoptotic process involved in morphogenesis","synonyms":[{"name":"down regulation of apoptosis involved in development","type":"related"},{"name":"down regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down regulation of morphogenetic apoptosis","type":"related"},{"name":"down-regulation of apoptosis involved in development","type":"related"},{"name":"down-regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"down-regulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"down-regulation of morphogenetic apoptosis","type":"related"},{"name":"downregulation of apoptosis involved in development","type":"related"},{"name":"downregulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"downregulation of apoptotic process involved in morphogenesis","type":"exact"},{"name":"downregulation of morphogenetic apoptosis","type":"related"},{"name":"inhibition of apoptosis involved in development","type":"related"},{"name":"inhibition of apoptosis involved in morphogenesis","type":"narrow"},{"name":"inhibition of apoptotic process involved in morphogenesis","type":"narrow"},{"name":"inhibition of morphogenetic apoptosis","type":"related"},{"name":"negative regulation of apoptosis involved in development","type":"related"},{"name":"negative regulation of apoptosis involved in morphogenesis","type":"narrow"},{"name":"negative regulation of morphogenetic apoptosis","type":"related"}],"termid":"GO:1902338"}


id: PR:O60198
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An S-adenosylmethionine synthetase that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S-adenosylmethionine synthase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC14F5.05c","secondary_identifiers":["UniProtKB:O60198"],"synonyms":[{"name":"AdoMet synthase (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"MAT (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"SPBC14F5.05c","type":"related"},{"name":"Spom972h-metK","type":"exact"},{"name":"methionine adenosyltransferase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O60198"}


id: PBO:0111742
data:
  {"annotation_feature_type":"gene","cv_name":"pombase_family_or_domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GLEYA domain","termid":"PBO:0111742"}


id: PBO:0057998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3922","termid":"PBO:0057998"}


id: FYPO:0007121
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which vegetative cell population growth is normal (i.e. indistinguishable from wild type) in a medium containing iron ions.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal vegetative cell population growth","termid":"FYPO:0001357"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0002058"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0002060"},{"rel_name":"is_a","termid":"FYPO:0002057"}],"interesting_parent_ids":["FYPO:0002058","FYPO:0000257","FYPO:0000003","FYPO:0002057","FYPO:0002060","FYPO:0000139"],"is_obsolete":false,"name":"normal growth on iron","synonyms":[{"name":"normal cell population growth in presence of iron","type":"exact"},{"name":"normal cell population growth on iron","type":"exact"},{"name":"normal cell population growth on iron ion","type":"exact"},{"name":"normal cellular response to iron","type":"related"},{"name":"normal growth on iron ions","type":"exact"},{"name":"normal vegetative cell population growth on iron","type":"exact"}],"termid":"FYPO:0007121"}


id: SO:0001807
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A conserved polypeptide motif that can be recognized by FZR/Cdh1-activated anaphase-promoting complex/cyclosome (APC/C) and targets a protein for ubiquitination and subsequent degradation by the APC/C. The consensus sequence is KENXXXN.","definition_xrefs":["PMID:18426916","PMID:10733526","PMID:1220884"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polypeptide_conserved_motif","termid":"SO:0100017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"KEN_box","synonyms":[{"name":"KEN box","type":"exact"}],"termid":"SO:0001807"}


id: MONDO:0002901
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder","termid":"MONDO:0005570"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"blood group incompatibility","secondary_identifiers":["UMLS:C0005806","DOID:4176","MEDGEN:609","CSP:0440-3703"],"termid":"MONDO:0002901","xrefs":{"Monarch":{"xref_id":"0002901"}}}


id: PBO:0067405
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 515, pseudogene","termid":"PBO:0067405"}


id: PBO:0083377
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps 5' end of the verified essential gene SUI3/YPL237W","termid":"PBO:0083377"}


id: PBO:0075496
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spermatogenesis associated 41","termid":"PBO:0075496"}


id: PBO:0043572
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"collagen type VIII alpha 2 chain","termid":"PBO:0043572"}


id: PBO:0004861
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2.7.1.15","termid":"PBO:0004861"}


id: PBO:0005739
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SIN component scaffold protein, centriolin ortholog Cdc11","termid":"PBO:0005739"}


id: GO:0008056
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the ocellus over time, from its formation to the mature structure. The ocellus is a simple visual organ of insects.","direct_ancestors":[{"relation_name":"is_a","term_name":"sensory organ development","termid":"GO:0007423"},{"relation_name":"part_of","term_name":"eye-antennal disc development","termid":"GO:0035214"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ocellus development","termid":"GO:0008056"}


id: GO:0090646
data:
  {"annotated_genes":["SJAG_00997","SJAG_00186","SJAG_04367","SJAG_00358","SJAG_00865","SJAG_02302","SJAG_02288","SJAG_01704","SJAG_04700","SJAG_00255","SJAG_04885"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82340,89743,119988,72022],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990180"},{"annotations":[80039],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070901"},{"annotations":[77426,120700],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0072670"},{"annotations":[96274,108914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990799"},{"annotations":[78174,94806],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070899"}]},"cv_name":"biological_process","definition":"The process in which a pre-tRNA molecule is converted to a mature tRNA, ready for addition of an aminoacyl group, in the mitochondrion.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial RNA metabolic process","termid":"GO:0000959"},{"relation_name":"is_a","term_name":"mitochondrial RNA processing","termid":"GO:0000963"},{"relation_name":"is_a","term_name":"tRNA processing","termid":"GO:0008033"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00186":null,"SJAG_00255":null,"SJAG_00358":null,"SJAG_00865":null,"SJAG_00997":null,"SJAG_01704":null,"SJAG_02288":null,"SJAG_02302":null,"SJAG_04367":null,"SJAG_04700":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0006399"},{"rel_name":"is_a","termid":"GO:0140053"},{"rel_name":"part_of","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0010467","GO:0140053","GO:0008150","GO:0006399"],"is_obsolete":false,"name":"mitochondrial tRNA processing","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6785470"],"termid":"GO:0090646","terms_by_termid":{"GO:0070899":null,"GO:0070901":null,"GO:0072670":null,"GO:1990180":null,"GO:1990799":null}}


id: FYPO:0003784
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell of normal morphology that undergoes one or two rounds of cell division, and all cells produced arrest the cell cycle with a septum and a nucleus in one compartment, and then die.","definition_xrefs":["PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable septated mononucleate vegetative cell","termid":"FYPO:0002000"},{"relation_name":"is_a","term_name":"inviable after spore germination, single or double cell division, arrest with single nucleus","termid":"FYPO:0003759"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000631","FYPO:0001985","FYPO:0000138","FYPO:0000002","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"inviable after spore germination, single or double cell division, arrest with septated mononucleate cell","synonyms":[{"name":"inviable after spore germination, single or double cell division, arrest with septated cell and single nucleus","type":"exact"},{"name":"inviable following spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"inviable germinated spore, single or double cell division, arrest with septated mononucleate cell","type":"exact"},{"name":"lethal after spore germination, single or double cell division, arrest with septated mononucleate cell","type":"exact"}],"termid":"FYPO:0003784"}


id: MONDO:0003406
data:
  {"annotated_genes":["SJAG_02104","SJAG_02724","SJAG_04457","SJAG_02119"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87847],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0031044"},{"annotations":[87084,87085],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014088"},{"annotations":[88784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[87907],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013584"}]},"cv_name":"mondo","definition":"Abnormal sleep-wake schedule or pattern associated with the circadian rhythm which affect the length, timing, and/or rigidity of the sleep-wake cycle relative to the day-night cycle. These can include dyssomnias such as circadian rhythm disorders, hypersomnia, and sleep apnea and parasomnias such as bruxism and rapid eye movement sleep disorder.","definition_xrefs":["MESH:D012893"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"psychiatric disorder","termid":"MONDO:0002025"},{"relation_name":"excluded_subClassOf","term_name":"nervous system disorder","termid":"MONDO:0005071"},{"relation_name":"is_a","term_name":"sleep disorder","termid":"MONDO:0100081"}],"gene_count":4,"genes_by_uniquename":{"SJAG_02104":null,"SJAG_02119":null,"SJAG_02724":null,"SJAG_04457":null},"genotype_count":0,"is_obsolete":false,"name":"sleep-wake disorder","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:535","MEDGEN:875755","ICD10CM:G47","SCTID:39898005","ICD9:307.40","ICD9:307.49","UMLS:C4042891","ICD9:307.4"],"synonyms":[{"name":"Subwakefullness syndrome","type":"related"},{"name":"Subwakefullness syndromes","type":"related"},{"name":"Tachypneas, sleep-related neurogenic","type":"related"},{"name":"disorder of sleep-wake cycle","type":"exact"},{"name":"disorder of sleep-wake schedule","type":"related"},{"name":"disorder, sleep","type":"related"},{"name":"disorder, sleep wake","type":"related"},{"name":"disorders of the sleep-wake schedule","type":"related"},{"name":"disorders, sleep","type":"related"},{"name":"disorders, sleep wake","type":"related"},{"name":"long sleeper syndrome","type":"related"},{"name":"long sleeper syndromes","type":"related"},{"name":"neurogenic Tachypneas, sleep-related","type":"related"},{"name":"neurogenic tachypnea, sleep-related","type":"related"},{"name":"non-organic sleep disorder","type":"related"},{"name":"phenotype, short sleep","type":"related"},{"name":"phenotypes, short sleep","type":"related"},{"name":"short sleep phenotype","type":"related"},{"name":"short sleep phenotypes","type":"related"},{"name":"short sleeper syndrome","type":"related"},{"name":"short sleeper syndromes","type":"related"},{"name":"sleep disorder","type":"related"},{"name":"sleep disorders","type":"related"},{"name":"sleep phenotypes, short","type":"related"},{"name":"sleep related neurogenic tachypnea","type":"related"},{"name":"sleep wake disorder","type":"exact"},{"name":"sleep-related neurogenic Tachypneas","type":"related"},{"name":"sleep-related neurogenic tachypnea","type":"related"},{"name":"sleeper syndrome, long","type":"related"},{"name":"sleeper syndrome, short","type":"related"},{"name":"sleeper syndromes, long","type":"related"},{"name":"sleeper syndromes, short","type":"related"},{"name":"syndrome, Subwakefullness","type":"related"},{"name":"syndrome, long sleeper","type":"related"},{"name":"syndrome, short sleeper","type":"related"},{"name":"syndromes, Subwakefullness","type":"related"},{"name":"syndromes, long sleeper","type":"related"},{"name":"syndromes, short sleeper","type":"related"},{"name":"tachypnea, sleep-related neurogenic","type":"related"},{"name":"wake disorder, sleep","type":"related"},{"name":"wake disorders, sleep","type":"related"}],"termid":"MONDO:0003406","terms_by_termid":{"MONDO:0011397":null,"MONDO:0013584":null,"MONDO:0014088":null,"MONDO:0031044":null},"xrefs":{"Monarch":{"xref_id":"0003406"}}}


id: MONDO:0012574
data:
  {"annotated_genes":["SJAG_02231"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87531],"is_not":false,"summary":null,"term":"MONDO:0012574"}]},"cv_name":"mondo","definition":"17p11.2 microduplication syndrome is a rare chromosomal anomaly syndrome, resulting from the partial duplication of the short arm of chromosome 17, typically characterized by hypotonia, poor feeding, failure to thrive, developmental delay (particularly cognitive and language deficits), mild-moderate intellectual deficit, and neuropsychiatric disorders (behavioral problems, anxiety, attention deficit hyperactivity disorder, autistic spectrum disorder, bipolar disorder). Structural cardiovascular anomalies (dilated aortic root, bicommissural aortic valve, atrial/ventricular and septal defects) and sleep disturbance (obstructive and central sleep apnea) are also frequently associated.","definition_xrefs":["Orphanet:1713"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"syndromic intellectual disability","termid":"MONDO:0000508"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"partial duplication of the short arm of chromosome 17","termid":"MONDO:0016950"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02231":null},"genotype_count":0,"is_obsolete":false,"name":"Potocki-Lupski syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:444010","DOID:0060853","OMIM:610883","SCTID:734016004","UMLS:C2931246","DECIPHER:19","GARD:10145","icd11.foundation:1720095972","NCIT:C124846"],"synonyms":[{"name":"17p11.2 Duplication syndrome","type":"exact"},{"name":"17p11.2 microduplication syndrome","type":"exact"},{"name":"Duplication 17p11.2 syndrome","type":"related"},{"name":"PTLS","type":"related"},{"name":"Potocki-Lupski syndrome","type":"exact"},{"name":"Potocki-Lupski syndrome (dup(17)(p11.2p11.2))","type":"related"},{"name":"Potocki-Lupski syndrome, Isolated cases","type":"exact"},{"name":"chromosome 17P11.2 Duplication syndrome","type":"related"},{"name":"chromosome 17p11.2 duplication syndrome","type":"exact"},{"name":"trisomy 17p11.2","type":"exact"}],"termid":"MONDO:0012574","terms_by_termid":{"MONDO:0012574":null},"xrefs":{"Monarch":{"xref_id":"0012574"}}}


id: PBO:0032705
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_number_of_Holliday_junctions","termid":"PBO:0032705"}


id: GO:0106173
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The volume enclosed by the membrane of a COPII-coated endocytic vesicle.","definition_xrefs":["GOC:pde","PMID:21172817"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic vesicle lumen","termid":"GO:0060205"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0031410"}],"interesting_parent_ids":["GO:0005737","GO:0031410","GO:0005575"],"is_obsolete":false,"name":"COPII-coated vesicle lumen","termid":"GO:0106173"}


id: MONDO:0017200
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Polycystic ovaries-urethral sphincter dysfunction syndrome is characterized by urinary retention and incomplete emptying of the bladder associated with abnormal electromyographic activity. It has been described in 33 women, 14 of whom also had polycystic ovaries.","definition_xrefs":["Orphanet:2795"],"direct_ancestors":[{"relation_name":"is_a","term_name":"female reproductive system disorder","termid":"MONDO:0002263"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polycystic ovaries-urethral sphincter dysfunction syndrome","secondary_identifiers":["UMLS:C2931462","GARD:2365","MESH:C537271","MEDGEN:419813"],"synonyms":[{"name":"fowler Christmas Chapple syndrome","type":"related"},{"name":"fowler's syndrome","type":"related"},{"name":"fowler-Christmas-Chapple syndrome","type":"exact"},{"name":"polycystic ovaries urethral sphincter dysfunction","type":"related"},{"name":"voiding dysfunction and polycystic ovaries","type":"related"}],"termid":"MONDO:0017200","xrefs":{"Monarch":{"xref_id":"0017200"}}}


id: PBO:0091117
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper-binding protein of the mitochondrial intermembrane space Cmc1","termid":"PBO:0091117"}


id: PBO:0120880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WAC antisense RNA 1","termid":"PBO:0120880"}


id: GO:0050545
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 3-sulfopyruvate + H+ = CO2 + sulfoacetaldehyde.","definition_xrefs":["EC:4.1.1.79","RHEA:20948"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carboxy-lyase activity","termid":"GO:0016831"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016829"}],"interesting_parent_ids":["GO:0003824","GO:0016829","GO:0003674"],"is_obsolete":false,"name":"sulfopyruvate decarboxylase activity","secondary_identifiers":["MetaCyc:R231-RXN","KEGG_REACTION:R05774"],"synonyms":[{"name":"sulfopyruvate carboxy-lyase (2-sulfoacetaldehyde-forming)","type":"related"},{"name":"sulfopyruvate carboxy-lyase activity","type":"related"},{"name":"sulphopyruvate decarboxylase activity","type":"exact"}],"termid":"GO:0050545"}


id: GO:0004712
data:
  {"annotated_genes":["SJAG_01181","SJAG_00993","SJAG_04486","SJAG_03067","SJAG_03592","SJAG_02342"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93751,101018,110619],"is_not":false,"summary":null,"term":"GO:0004712"},{"annotations":[73495,76381,78255],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0004708"}]},"cv_name":"molecular_function","definition":"Catalysis of the reactions: ATP + a protein serine = ADP + protein serine phosphate; ATP + a protein threonine = ADP + protein threonine phosphate; and ATP + a protein tyrosine = ADP + protein tyrosine phosphate.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein kinase activity","termid":"GO:0004672"}],"gene_count":6,"genes_by_uniquename":{"SJAG_00993":null,"SJAG_01181":null,"SJAG_02342":null,"SJAG_03067":null,"SJAG_03592":null,"SJAG_04486":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0004672"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0140096"}],"interesting_parent_ids":["GO:0003674","GO:0140096","GO:0016301","GO:0003824","GO:0016740","GO:0004672"],"is_obsolete":false,"name":"protein serine/threonine/tyrosine kinase activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-6802916","Reactome:R-HSA-5674373","Reactome:R-HSA-6802941","Reactome:R-HSA-6802918","Reactome:R-HSA-5672969","EC:2.7.12.1","Reactome:R-HSA-6802921","Reactome:R-HSA-9656212","Reactome:R-HSA-6802910","Reactome:R-HSA-6802922","Reactome:R-HSA-6802924","Reactome:R-HSA-6802927"],"synonyms":[{"name":"dual-specificity kinase activity","type":"exact"},{"name":"dual-specificity protein kinase","type":"exact"},{"name":"protein threonine/tyrosine kinase activity","type":"narrow"}],"termid":"GO:0004712","terms_by_termid":{"GO:0004708":null,"GO:0004712":null}}


id: GO:0010243
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of an organonitrogen stimulus. An organonitrogen compound is formally a compound containing at least one carbon-nitrogen bond.","definition_xrefs":["PMID:9869419"],"gene_count":0,"genotype_count":0,"name":"obsolete response to organonitrogen compound (obsolete GO:0010243)","synonyms":[{"name":"response to organic nitrogen","type":"exact"}],"termid":"GO:0010243"}


id: PBO:0073421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SEZ6L antisense RNA 1","termid":"PBO:0073421"}


id: PBO:0063508
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PDS5 cohesin associated factor A","termid":"PBO:0063508"}


id: GO:0015709
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of thiosulfate into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:krc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inorganic anion transport","termid":"GO:0015698"},{"relation_name":"is_a","term_name":"sulfur compound transport","termid":"GO:0072348"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"thiosulfate transport","synonyms":[{"name":"thiosulphate transport","type":"exact"}],"termid":"GO:0015709"}


id: GO:0160272
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a 3'-end 2',3'-cyclophospho-ribonucleotide-RNA + 2 H2O = a 3'-end ribonucleotide-RNA + phosphate + H+.","definition_xrefs":["PMID:32732418"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatase activity","termid":"GO:0016791"},{"relation_name":"is_a","term_name":"catalytic activity, acting on RNA","termid":"GO:0140098"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003674","GO:0140098","GO:0016788","GO:0016787","GO:0003824"],"is_obsolete":false,"name":"RNA 2',3'-cyclic phosphatase activity","termid":"GO:0160272"}


id: GO:0060274
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The homeostatic process in which a population of cells changes its metabolic activity resulting in the rate of death in the population equaling the rate of reproduction. Stationary phase can be in response to limited nutrients or a build-up of toxic substances in the environment.","definition_xrefs":["GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete maintenance of stationary phase (obsolete GO:0060274)","termid":"GO:0060274"}


id: PBO:0070752
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 pseudogene 8","termid":"PBO:0070752"}


id: PATO:0000822
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000822 taste type value (obsolete PATO:0000822)","termid":"PATO:0000822"}


id: PBO:0042711
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cadherin EGF LAG seven-pass G-type receptor 2","termid":"PBO:0042711"}


id: PBO:0076179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfotransferase family 2B member 1","termid":"PBO:0076179"}


id: SO:0000142
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A folded DNA sequence.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sequence_secondary_structure","termid":"SO:0000002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA_sequence_secondary_structure","synonyms":[{"name":"DNA sequence secondary structure","type":"exact"}],"termid":"SO:0000142"}


id: MONDO:0020185
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete eyebrow/eyelashes hypertrichosis (obsolete MONDO:0020185)","secondary_identifiers":["Orphanet:98595"],"termid":"MONDO:0020185","xrefs":{"Monarch":{"xref_id":"0020185"}}}


id: GO:0031599
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The regulatory subcomplex of a proteasome located in the endoplasmic reticulum of a cell.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete ER proteasome regulatory particle (obsolete GO:0031599)","termid":"GO:0031599"}


id: PBO:0028088
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_methylation_at_heterochromatin_island","termid":"PBO:0028088"}


id: PR:Q10275
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- mba1 gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q10275"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized protein C13G7.11 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC13G7.11","synonyms":[{"name":"Spom972h-mba1","type":"exact"}],"termid":"PR:Q10275"}


id: FYPO:0000402
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of progression through the G2/M transition of the mitotic cell cycle is increased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic G2/M phase transition","termid":"FYPO:0000399"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001320","FYPO:0000631","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased mitotic G2/M phase transition","synonyms":[{"name":"cell cycle progression through the G2/M phase transition: increased","type":"related"},{"name":"increased G2/M phase transition during mitotic cell cycle","type":"exact"},{"name":"increased cell cycle progression through mitotic G2/M phase transition","type":"exact"},{"name":"increased occurrence of mitotic G2/M phase transition during vegetative growth","type":"exact"}],"termid":"FYPO:0000402"}


id: GO:0038027
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of molecular signals initiated by apolipoprotein A-I binding to its receptor on the surface of a target cell, and ending with the regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["PMID:16443932","GOC:signaling","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell surface receptor signaling pathway","termid":"GO:0007166"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"apolipoprotein A-I-mediated signaling pathway","synonyms":[{"name":"apolipoprotein A-I-mediated signalling pathway","type":"exact"}],"termid":"GO:0038027"}


id: GO:0061528
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The regulated release of aspartate by a cell.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"C4-dicarboxylate transport","termid":"GO:0015740"},{"relation_name":"is_a","term_name":"acidic amino acid transport","termid":"GO:0015800"},{"relation_name":"is_a","term_name":"secretion by cell","termid":"GO:0032940"},{"relation_name":"is_a","term_name":"nitrogen compound transport","termid":"GO:0071705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"aspartate secretion","termid":"GO:0061528"}


id: PBO:0063759
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polyhomeotic homolog 1","termid":"PBO:0063759"}


id: PBO:0044018
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"casein kinase 1 gamma 2","termid":"PBO:0044018"}


id: GO:1904447
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of folic acid from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:TermGenie","GOC:BHF","GOC:hal","GO_REF:0000075","PMID:19762432"],"direct_ancestors":[{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"},{"relation_name":"is_a","term_name":"folate transmembrane transport","termid":"GO:0098838"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"folate import across plasma membrane","synonyms":[{"name":"folate import into cell","type":"exact"},{"name":"folic acid import across plasma membrane","type":"related"}],"termid":"GO:1904447"}


id: GO:1901037
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that regulates transcription such that the target genes are transcribed during the M/G1 transition of the mitotic cell cycle.","definition_xrefs":["GOC:TermGenie","PMID:12411492","GOC:mah","GOC:mtg_cell_cycle"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle (obsolete GO:1901037)","synonyms":[{"name":"global transcription regulation from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of gene-specific transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of global transcription from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"related"},{"name":"regulation of transcription during M/G1 transition of mitotic cell cycle","type":"broad"},{"name":"regulation of transcription from Pol II promoter during M/G1 transition of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter during M/G1 transition of mitotic cell cycle","type":"exact"},{"name":"regulation of transcription from RNA polymerase II promoter involved in M/G1 transition of mitotic cell cycle","type":"related"}],"termid":"GO:1901037"}


id: GO:0030519
data:
  {"annotated_genes":["SJAG_01567"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[99497],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0062064"}]},"cv_name":"molecular_function","definition":"Binding to a small nucleolar ribonucleoprotein particle.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ribonucleoprotein complex binding","termid":"GO:0043021"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01567":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0005488","GO:0003674"],"is_obsolete":false,"name":"snoRNP binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0030519","terms_by_termid":{"GO:0062064":null}}


id: MONDO:1012489
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis with short life expectancy, non-human animal","termid":"MONDO:1011759"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis with short life expectancy, domestic cat","secondary_identifiers":["OMIA:001949-9685"],"termid":"MONDO:1012489","xrefs":{"Monarch":{"xref_id":"1012489"}}}


id: PBO:0076268
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWT1 RNA endoribonuclease homolog","termid":"PBO:0076268"}


id: GO:0033548
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of phytic acid, myo-inositol hexakisphosphate, by the successively phosphorylation of myo-inositol or an inositol trisphosphate; the inositol trisphosphates that may be used by this pathway are inositol 3,4,5-trisphosphate and inositol 3,4,6trisphosphate.","definition_xrefs":["MetaCyc:PWY-4661","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"myo-inositol hexakisphosphate biosynthetic process","termid":"GO:0010264"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"myo-inositol hexakisphosphate biosynthetic process, lipid-independent","synonyms":[{"name":"myo-inositol hexakisphosphate anabolism, lipid-independent","type":"exact"},{"name":"myo-inositol hexakisphosphate biosynthesis, lipid-independent","type":"exact"},{"name":"myo-inositol hexakisphosphate formation, lipid-independent","type":"exact"},{"name":"myo-inositol hexakisphosphate synthesis, lipid-independent","type":"exact"},{"name":"phytate biosynthesis, lipid-independent","type":"exact"},{"name":"phytate biosynthetic process, lipid-independent","type":"exact"}],"termid":"GO:0033548"}


id: MONDO:0019173
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Rabies is a viral zoonosis leading to a fatal encephalopathy if not treated.","definition_xrefs":["Orphanet:770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"infectious disorder of the nervous system","termid":"MONDO:0020010"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rabies","secondary_identifiers":["MEDGEN:48308","icd11.foundation:854762584","NCIT:C28182","DOID:11260","GARD:7516","ICD10CM:A82","MedDRA:10037742","NORD:1644","UMLS:C0034494","ICD9:071","MESH:D011818","ICD10WHO:A82","SCTID:14168008"],"synonyms":[{"name":"lyssa","type":"exact"}],"termid":"MONDO:0019173","xrefs":{"Monarch":{"xref_id":"0019173"}}}


id: FYPO:0003129
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which a protein that is normally localized to discrete regions in the nucleus, visible as foci or dots by microscopy, is abnormally localized such that dots cannot be observed during a cellular response to ionizing radiation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased punctate nuclear protein localization during cellular response to ionizing radiation","termid":"FYPO:0003483"},{"relation_name":"is_a","term_name":"loss of punctate nuclear protein localization","termid":"FYPO:0005863"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001985","FYPO:0000138","FYPO:0001320","FYPO:0005447"],"is_obsolete":false,"name":"loss of punctate nuclear protein localization during cellular response to ionizing radiation","synonyms":[{"name":"abolished punctate nuclear protein localization during cellular response to ionizing radiation","type":"exact"},{"name":"loss of punctate nuclear protein localisation during cellular response to ionising radiation","type":"exact"},{"name":"loss of punctate nuclear protein localization during cellular response to IR","type":"exact"},{"name":"loss of punctate nuclear protein localization during cellular response to ionizing radiation during mitotic cell cycle","type":"related"},{"name":"loss of punctate nuclear protein localization during cellular response to ionizing radiation during vegetative growth","type":"exact"}],"termid":"FYPO:0003129"}


id: PR:O75002
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A ran guanine nucleotide release factor that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO05001","PANTHER:PTHR15837:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear import protein mog1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC1840.01c","secondary_identifiers":["UniProtKB:O75002"],"synonyms":[{"name":"Spom972h-RANGRF","type":"exact"}],"termid":"PR:O75002"}


id: GO:2000538
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of B cell chemotaxis.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of lymphocyte chemotaxis","termid":"GO:0140131"},{"relation_name":"is_a","term_name":"regulation of B cell chemotaxis","termid":"GO:2000537"},{"relation_name":"positively_regulates","term_name":"B cell chemotaxis","termid":"GO:0035754"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of B cell chemotaxis","termid":"GO:2000538"}


id: GO:0048837
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the sorocarp sorus over time, from its formation to the mature structure. A sorocarp sorus is the spore containing structure of a sorocarp.","definition_xrefs":["GOC:devbiol","PMID:4332228","GOC:mtg_sensu"],"direct_ancestors":[{"relation_name":"is_a","term_name":"socially cooperative development","termid":"GO:0099120"},{"relation_name":"part_of","term_name":"culmination involved in sorocarp development","termid":"GO:0031154"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sorocarp sorus development","synonyms":[{"name":"sorocarp sorus formation","type":"exact"},{"name":"sorocarp spore head formation","type":"exact"},{"name":"sorocarp spore head morphogenesis","type":"related"}],"termid":"GO:0048837"}


id: PBO:0066113
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAS guanyl releasing protein 4","termid":"PBO:0066113"}


id: MONDO:0011627
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autism, susceptiblity to","termid":"MONDO:0020836"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"autism, susceptibility to, 5","secondary_identifiers":["UMLS:C1853755","OMIM:606053","MEDGEN:340048"],"synonyms":[{"name":"AUTS5","type":"exact"},{"name":"autism, susceptibility to, 5","type":"exact"},{"name":"autism-related speech delay","type":"related"},{"name":"intellectual developmental disorder with autism and speech delay","type":"exact"},{"name":"phrase speech delay, autism-related","type":"related"}],"termid":"MONDO:0011627","xrefs":{"Monarch":{"xref_id":"0011627"}}}


id: PBO:0027382
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_exit_from_mitosis","termid":"PBO:0027382"}


id: PBO:0033775
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_termination_of_RNA_polymerase_II_transcription_at_RTS1_barrier","termid":"PBO:0033775"}


id: PBO:0113447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit l of the mitochondrial F1F0 ATP synthase; F1F0 ATP synthase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; more abundant in the ATP synthase monomer; involved in the calcium-induced permeability transition and calcium homeostasis; does not impact ATP synthase activity and stability; N-terminal region has sequence similarity to Atp19p; conserved in A. gossypii; detected in highly purified mitochondria in high-throughput studies","termid":"PBO:0113447"}


id: PBO:0049197
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Grid2 interacting protein","termid":"PBO:0049197"}


id: FYPO:0007401
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the kinetochore of a chromosome is abnormal during anaphase of mitosis.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to kinetochore during mitotic M phase","termid":"FYPO:0008164"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0001320","FYPO:0000138","FYPO:0000002"],"is_obsolete":false,"name":"abnormal protein localization to kinetochore during mitotic anaphase","synonyms":[{"name":"abnormal protein localisation to kinetochore during mitotic anaphase","type":"exact"},{"name":"abnormal protein localization to kinetochore during anaphase of mitosis","type":"exact"}],"termid":"FYPO:0007401"}


id: GO:0061898
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: all-trans-retinoic acid + 2 H+ + O2 + 2 reduced [adrenodoxin] = all-trans-3,4-didehydro retinoic acid + 2 H2O + 2 oxidized [adrenodoxin].","definition_xrefs":["PMID:27059013"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"all-trans retinoic acid 3,4-desaturase activity","termid":"GO:0061898"}


id: GO:0060458
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The biological process whose specific outcome is the progression of a right lung from an initial condition to its mature state. This process begins with the formation of the right lung and ends with the mature structure. The right lung is the lung which is on the right side of the anterior posterior axis looking from a dorsal to ventral aspect.","definition_xrefs":["GOC:dph","GOC:mtg_lung"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung development","termid":"GO:0030324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"right lung development","synonyms":[{"name":"right pulmonary development","type":"exact"}],"termid":"GO:0060458"}


id: PR:P36594
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA-directed RNA polymerase II subunit RPB1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02936","PRO:DNx","PANTHER:PTHR19376:SF14"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA-directed RNA polymerase II subunit rpb1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC28F2.12","secondary_identifiers":["UniProtKB:P36594"],"synonyms":[{"name":"DNA-directed RNA polymerase III largest subunit (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"RNA polymerase II subunit B1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-POLR2A","type":"exact"}],"termid":"PR:P36594"}


id: PBO:0080262
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vomeronasal 1 receptor 25 pseudogene","termid":"PBO:0080262"}


id: FYPO:0004089
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the occurrence of meiotic recombination is decreased during a zygotic meiotic nuclear division. Zygotic meiosis takes place immediately after conjugation and karyogamy, without intervening vegetative growth and division of diploid cells.","definition_xrefs":["PMID:11907273","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased meiotic recombination","termid":"FYPO:0000485"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000293"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0000631","FYPO:0000002","FYPO:0001985","FYPO:0000293"],"is_obsolete":false,"name":"decreased meiotic recombination during zygotic meiosis","synonyms":[{"name":"decreased meiotic recombination in zygotic nucleus","type":"exact"},{"name":"reduced meiotic recombination during zygotic meiosis","type":"exact"}],"termid":"FYPO:0004089"}


id: FYPO:0007264
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the eisosome filament is longer than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal eisosome morphology","termid":"FYPO:0007439"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0001985"],"is_obsolete":false,"name":"long eisosome filament","synonyms":[{"name":"elongated eisosome filament","type":"exact"},{"name":"increased eisosome filament length","type":"exact"},{"name":"long eisosome filament during mitotic cell cycle","type":"related"},{"name":"long eisosome filament during vegetative growth","type":"exact"},{"name":"long linear eisosomes","type":"exact"}],"termid":"FYPO:0007264"}


id: MONDO:1040044
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any ciliopathy caused by variants in the BBS4 gene.","definition_xrefs":["PMID:15654695","PMID:11381270"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ciliopathy","termid":"MONDO:0005308"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BBS4-related ciliopathy","synonyms":[{"name":"BBS4-related ciliopathy","type":"exact"}],"termid":"MONDO:1040044","xrefs":{"Monarch":{"xref_id":"1040044"}}}


id: PBO:0039290
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ALG5 dolichyl-phosphate beta-glucosyltransferase","termid":"PBO:0039290"}


id: GO:0097138
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterodimeric protein complex consisting of BAD and BCL-2, members of the Bcl-2 family of anti- and proapoptotic regulators.","definition_xrefs":["PMID:14634621","GOC:so"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Bcl-2 family protein complex","termid":"GO:0097136"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"BAD-BCL-2 complex","termid":"GO:0097138"}


id: MONDO:0010647
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any azoospermia in which the cause of the disease is a mutation in the TEX11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spermatogenic failure","termid":"MONDO:0004983"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005047"}],"interesting_parent_ids":["MONDO:0005047"],"is_obsolete":false,"name":"spermatogenic failure, X-linked, 2","secondary_identifiers":["GARD:15302","UMLS:C1839841","MEDGEN:374322","OMIM:309120","DOID:0070185"],"synonyms":[{"name":"Male infertility from defect in meiosis","type":"related"},{"name":"SPGFX2","type":"related"},{"name":"TEX11 azoospermia","type":"exact"},{"name":"azoospermia caused by mutation in TEX11","type":"exact"},{"name":"spermatogenic failure, X-linked, 2","type":"exact"},{"name":"spermatogenic failure, X-linked, 2, X-linked recessive","type":"exact"},{"name":"spermatogenic failure, X-linked, type 2","type":"exact"}],"termid":"MONDO:0010647","xrefs":{"Monarch":{"xref_id":"0010647"}}}


id: GO:0048075
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of establishment of a pattern of pigment in the eye of an organism.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of eye pigmentation","termid":"GO:0048073"},{"relation_name":"is_a","term_name":"positive regulation of developmental pigmentation","termid":"GO:0048087"},{"relation_name":"positively_regulates","term_name":"eye pigmentation","termid":"GO:0048069"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of eye pigmentation","synonyms":[{"name":"activation of eye pigmentation","type":"narrow"},{"name":"stimulation of eye pigmentation","type":"narrow"},{"name":"up regulation of eye pigmentation","type":"exact"},{"name":"up-regulation of eye pigmentation","type":"exact"},{"name":"upregulation of eye pigmentation","type":"exact"}],"termid":"GO:0048075"}


id: PBO:0068329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNF32 divergent transcript","termid":"PBO:0068329"}


id: MONDO:0006557
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the subcutaneous soft tissues.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system benign neoplasm","termid":"MONDO:0000652"},{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"subcutaneous tissue disorder","termid":"MONDO:0019296"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hemangioma of subcutaneous tissue","secondary_identifiers":["DOID:13081","MEDGEN:146343","NCIT:C8540","UMLS:C0685200","SCTID:93473009"],"synonyms":[{"name":"angioma of subcutaneous tissue","type":"exact"},{"name":"angioma of the subcutaneous tissue","type":"exact"},{"name":"hemangioma of subcutaneous tissue","type":"exact"},{"name":"hemangioma of superficial fascia","type":"exact"},{"name":"hemangioma of the subcutaneous tissue","type":"exact"},{"name":"subcutaneous angioma","type":"exact"},{"name":"subcutaneous haemangioma","type":"exact"},{"name":"subcutaneous hemangioma","type":"exact"},{"name":"subcutaneous tissue angioma","type":"exact"},{"name":"subcutaneous tissue hemangioma","type":"exact"},{"name":"superficial fascia hemangioma","type":"exact"}],"termid":"MONDO:0006557","xrefs":{"Monarch":{"xref_id":"0006557"}}}


id: PBO:0034078
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-in_apomorphy_relationship_with","termid":"PBO:0034078"}


id: PBO:0034319
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-represses_expression_of","termid":"PBO:0034319"}


id: PBO:0000139
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MatE family transporter (predicted)","termid":"PBO:0000139"}


id: PBO:0043071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cholinergic receptor muscarinic 5","termid":"PBO:0043071"}


id: SO:0001946
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A kind of histone modification site, whereby the 15th residue (a lysine), from the start of the H2B histone protein is acetylated.","definition_xrefs":["EBI:nj"],"direct_ancestors":[{"relation_name":"is_a","term_name":"histone_2B_acetylation_site","termid":"SO:0002143"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"SO:0000839"}],"interesting_parent_ids":["SO:0000839"],"is_obsolete":false,"name":"H2BK15_acetylation_site","synonyms":[{"name":"H2BK15 acetylation site","type":"exact"},{"name":"H2BK15ac","type":"exact"}],"termid":"SO:0001946"}


id: PR:O74397
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"An asparagine synthetase domain-containing protein 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"asparagine synthetase domain-containing protein C4F6.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4F6.11c","secondary_identifiers":["UniProtKB:O74397"],"synonyms":[{"name":"Spom972h-ASNSD1","type":"exact"}],"termid":"PR:O74397"}


id: GO:0002808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of antibacterial peptide biosynthesis.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of antibacterial peptide production","termid":"GO:0002786"},{"relation_name":"is_a","term_name":"regulation of antimicrobial peptide biosynthetic process","termid":"GO:0002805"},{"relation_name":"regulates","term_name":"antibacterial peptide biosynthetic process","termid":"GO:0002780"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of antibacterial peptide biosynthetic process","termid":"GO:0002808"}


id: PBO:0076519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"taste 2 receptor member 22 pseudogene","termid":"PBO:0076519"}


id: MONDO:0007568
data:
  {"annotated_genes":["SJAG_02431","SJAG_03703"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89079,89080],"is_not":false,"summary":null,"term":"MONDO:0007568"}]},"cv_name":"mondo","definition":"Any familial thoracic aortic aneurysm and aortic dissection in which the cause of the disease is a mutation in the MYH11 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial thoracic aortic aneurysm and aortic dissection","termid":"MONDO:0019625"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02431":null,"SJAG_03703":null},"genotype_count":0,"is_obsolete":false,"name":"aortic aneurysm, familial thoracic 4","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C1851504","OMIM:132900","GARD:9876","MEDGEN:338704","MESH:C537784"],"synonyms":[{"name":"AAT4","type":"related"},{"name":"FAA4","type":"related"},{"name":"MYH11 familial thoracic aortic aneurysm and aortic dissection","type":"exact"},{"name":"aortic aneurysm, familial thoracic 4","type":"exact"},{"name":"aortic aneurysm, familial thoracic type 4","type":"exact"},{"name":"aortic aneurysm/aortic dissection and patent ductus arteriosus","type":"related"},{"name":"familial thoracic aortic aneurysm and aortic dissection caused by mutation in MYH11","type":"exact"}],"termid":"MONDO:0007568","terms_by_termid":{"MONDO:0007568":null},"xrefs":{"Monarch":{"xref_id":"0007568"}}}


id: FYPO:0003093
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which small RNA molecules physically associated with the Argonaute protein (Ago1) are longer than normal.","definition_xrefs":["PMID:24095277","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985"],"is_obsolete":false,"name":"increased Argonaute-associated RNA length","synonyms":[{"name":"increased Argonaute-associated priRNA length","type":"narrow"},{"name":"increased Argonaute-associated siRNA length","type":"narrow"},{"name":"increased length of Ago1-associated RNA","type":"narrow"},{"name":"increased length of Argonaute-associated RNA","type":"exact"},{"name":"increased length of Argonaute-associated small RNA","type":"exact"}],"termid":"FYPO:0003093"}


id: PBO:0069318
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 576, pseudogene","termid":"PBO:0069318"}


id: PBO:0063638
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"profilin family member 4","termid":"PBO:0063638"}


id: PATO:0000596
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A volume which is relatively low.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"decreased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"decreased size","termid":"PATO:0000587"},{"relation_name":"is_a","term_name":"volume","termid":"PATO:0000918"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decreased volume","synonyms":[{"name":"low volume","type":"exact"},{"name":"small volume","type":"related"}],"termid":"PATO:0000596"}


id: GO:0060077
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A synapse in which an action potential in the presynaptic cell reduces the probability of an action potential occurring in the postsynaptic cell.","definition_xrefs":["GOC:ef","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"synapse","termid":"GO:0045202"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"inhibitory synapse","secondary_identifiers":["Wikipedia:Inhibitory_postsynaptic_potential"],"termid":"GO:0060077"}


id: PBO:0038360
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-transports","termid":"PBO:0038360"}


id: PBO:0036029
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_transcription_during_cellular_response_to_heat","termid":"PBO:0036029"}


id: PBO:0046359
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"endosulfine alpha pseudogene 1","termid":"PBO:0046359"}


id: GO:0045017
data:
  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chemical reactions and pathways resulting in the formation of glycerolipids, any lipid with a glycerol backbone.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipid biosynthetic process","termid":"GO:0008610"},{"relation_name":"is_a","term_name":"glycerolipid metabolic 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id: PBO:0005622
data:
  {"annotation_feature_type":"gene","cv_name":"subunit_composition","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homotrimer","termid":"PBO:0005622"}


id: GO:0003829
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-N-acetyl-D-glucosamine + beta-D-galactosyl-(1->3)-N-acetyl-D-galactosaminyl-R = UDP + beta-D-galactosyl-(1->3)-[N-acetyl-beta-D-glucosaminyl-(1->6)]-N-acetyl-D-galactosaminyl-R. This reaction is the addition of N-acetyl-alpha-D-glucosamine to the core 1 structure of O-glycans forming core 2.","definition_xrefs":["EC:2.4.1.102"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acetylglucosaminyltransferase activity","termid":"GO:0008375"},{"relation_name":"is_a","term_name":"catalytic activity, acting on a glycoprotein","termid":"GO:0140103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0016757"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016757","GO:0140096","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,6-N-acetylglucosaminyltransferase activity","secondary_identifiers":["Reactome:R-HSA-914018","MetaCyc:2.4.1.102-RXN","Reactome:R-HSA-914012","RHEA:18705"],"synonyms":[{"name":"O-glycosyl-oligosaccharide-glycoprotein N-acetylglucosaminyltransferase I activity","type":"related"},{"name":"UDP-N-acetyl-D-glucosamine:O-glycosyl-glycoprotein (N-acetyl-D-glucosamine to N-acetyl-D-galactosamine of beta-D-galactosyl-1,3-N-acetyl-D-galactosaminyl-R) beta-1,6-N-acetyl-D-glucosaminyltransferase activity","type":"related"},{"name":"beta(6)-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"beta6-N-acetylglucosaminyltransferase activity","type":"related"},{"name":"core 2 acetylglucosaminyltransferase activity","type":"related"},{"name":"core 6-beta-GlcNAc-transferase A","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta-(1,6)-acetylglucosaminyltransferase activity","type":"related"},{"name":"uridine diphosphoacetylglucosamine-mucin beta-(1->6)-acetylglucosaminyltransferase activity","type":"related"}],"termid":"GO:0003829"}


id: PBO:0039585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANO3 antisense RNA 1","termid":"PBO:0039585"}


id: GO:0047072
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  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2,3-dihydroxybenzoate + O2 = 2-carboxy-cis,cis-muconate + 2 H+.","definition_xrefs":["EC:1.13.11.28","RHEA:15369"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen","termid":"GO:0016702"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"2,3-dihydroxybenzoate 2,3-dioxygenase activity","secondary_identifiers":["KEGG_REACTION:R01506","MetaCyc:1.13.11.28-RXN"],"synonyms":[{"name":"2,3-dihydroxybenzoate 2,3-oxygenase activity","type":"related"},{"name":"2,3-dihydroxybenzoate:oxygen 2,3-oxidoreductase (decyclizing)","type":"related"}],"termid":"GO:0047072"}


id: GO:1905721
data:
  {"annotated_genes":["SJAG_02695"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[98982],"is_not":false,"summary":null,"term":"GO:1905721"}]},"cv_name":"cellular_component","definition":"Any microtubule end that is part of a mitotic spindle astral microtubule.","definition_xrefs":["GOC:TermGenie","PMID:11007487","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"microtubule end","termid":"GO:1990752"},{"relation_name":"part_of","term_name":"mitotic spindle astral microtubule","termid":"GO:0061673"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02695":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0072686"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0072686","GO:0015630","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"mitotic spindle astral microtubule end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"mitotic spindle astral microtubule tip","type":"exact"}],"termid":"GO:1905721","terms_by_termid":{"GO:1905721":null}}


id: PBO:0046142
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 5B","termid":"PBO:0046142"}


id: PBO:0067226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 296, pseudogene","termid":"PBO:0067226"}


id: MONDO:0014577
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An asphyxiating thoracic dystrophy that has material basis in homozygous mutation in the CEP120 gene on chromosome 5q23.","definition_xrefs":["DOID:0110093","PMID:25361962"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Jeune syndrome","termid":"MONDO:0018770"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"short-rib thoracic dysplasia 13 with or without polydactyly","secondary_identifiers":["GARD:16079","MEDGEN:898712","UMLS:C4225378","OMIM:616300"],"synonyms":[{"name":"SRTD13","type":"exact"},{"name":"short-rib thoracic dysplasia 13 with or without polydactyly","type":"exact"}],"termid":"MONDO:0014577","xrefs":{"Monarch":{"xref_id":"0014577"}}}


id: PBO:0004274
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD40/YVTN repeat-like","termid":"PBO:0004274"}


id: PBO:0005265
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosome biogenesis protein Urb1 (predicted)","termid":"PBO:0005265"}


id: GO:0033106
data:
  {"annotated_genes":["SJAG_01415","SJAG_02168","SJAG_03953","SJAG_03690"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[80851,92739,97738,119576],"is_not":false,"summary":null,"term":"GO:0033106"}]},"cv_name":"cellular_component","definition":"The lipid bilayer surrounding any of the compartments that make up the cis-Golgi network.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bounding membrane of organelle","termid":"GO:0098588"},{"relation_name":"part_of","term_name":"cis-Golgi network","termid":"GO:0005801"}],"gene_count":4,"genes_by_uniquename":{"SJAG_01415":null,"SJAG_02168":null,"SJAG_03690":null,"SJAG_03953":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"cis-Golgi network membrane","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"Golgi cis face membrane","type":"related"},{"name":"cis Golgi network membrane","type":"exact"}],"termid":"GO:0033106","terms_by_termid":{"GO:0033106":null}}


id: GO:0003405
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental growth that results in the lengthening of the optic vesicle in the posterior direction.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"developmental growth involved in morphogenesis","termid":"GO:0060560"},{"relation_name":"part_of","term_name":"optic vesicle morphogenesis","termid":"GO:0003404"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"optic vesicle elongation","termid":"GO:0003405"}


id: PBO:0072016
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S8 pseudogene 3","termid":"PBO:0072016"}


id: MONDO:0005595
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma that arises from the larynx. It is the most common histologic type of laryngeal carcinoma. It can arise from the glottis, supraglottic area, or it can be transglottic. Glottic squamous cell carcinoma is the most frequent laryngeal carcinoma in the United States. The symptoms, clinical behavior and the prognosis depend on the site of origin within the larynx.","definition_xrefs":["NCIT:C4044"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete rare otorhinolaryngologic tumor (obsolete MONDO:0020035)","termid":"MONDO:0020035"},{"relation_name":"is_a","term_name":"laryngeal carcinoma","termid":"MONDO:0002358"},{"relation_name":"is_a","term_name":"head and neck squamous cell carcinoma","termid":"MONDO:0010150"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"laryngeal squamous cell carcinoma","secondary_identifiers":["MEDGEN:83630","DOID:2876","SCTID:405822008","EFO:0006352","ONCOTREE:LXSC","Orphanet:494550","GARD:17908","UMLS:C0280324"],"synonyms":[{"name":"LXSC","type":"related"},{"name":"epidermoid carcinoma of larynx","type":"exact"},{"name":"epidermoid carcinoma of the larynx","type":"exact"},{"name":"laryngeal epidermoid carcinoma","type":"exact"},{"name":"laryngeal squamous cell carcinoma","type":"exact"},{"name":"laryngeal throat squamous cell cancer","type":"exact"},{"name":"larynx epidermoid carcinoma","type":"exact"},{"name":"larynx squamous cell carcinoma","type":"exact"},{"name":"squamous cell carcinoma of larynx","type":"exact"},{"name":"squamous cell carcinoma of the larynx","type":"exact"}],"termid":"MONDO:0005595","xrefs":{"Monarch":{"xref_id":"0005595"}}}


id: PBO:0047617
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FGF1 intracellular binding protein","termid":"PBO:0047617"}


id: MONDO:0012036
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"systemic lupus erythematosus, susceptibility to, 4","secondary_identifiers":["UMLS:C1842057","MEDGEN:374849","OMIM:608437"],"synonyms":[{"name":"SLEB4","type":"exact"},{"name":"systemic lupus erythematosus, susceptibility to, 4","type":"exact"}],"termid":"MONDO:0012036","xrefs":{"Monarch":{"xref_id":"0012036"}}}


id: MONDO:0859257
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant dopa-responsive dystonia","termid":"MONDO:0971063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0003441","MONDO:0005066"],"is_obsolete":false,"name":"intellectual developmental disorder with language impairment and early-onset DOPA-responsive dystonia-parkinsonism","secondary_identifiers":["OMIM:619911","Orphanet:660017","MEDGEN:1805453","UMLS:C5677001"],"termid":"MONDO:0859257","xrefs":{"Monarch":{"xref_id":"0859257"}}}


id: PBO:0001251
data:
  {"annotation_feature_type":"gene","cv_name":"disease_associated","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"argininemia","termid":"PBO:0001251"}


id: GO:0098946
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the presynaptic endocytic zone membrane consisting of the gene products and protein complexes having either part of their peptide sequence embedded in the hydrophobic region of the membrane or some other covalently attached group such as a GPI anchor that is similarly embedded in the membrane.","definition_xrefs":["GOC:dos","GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete intrinsic component of presynaptic endocytic zone membrane (obsolete GO:0098946)","synonyms":[{"name":"intrinsic to presynaptic active zone membrane","type":"narrow"}],"termid":"GO:0098946"}


id: PBO:0050856
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"interactor of little elongation complex ELL subunit 2 pseudogene 1","termid":"PBO:0050856"}


id: GO:0006522
data:
  {"annotated_genes":["SJAG_04145"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[113287],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042852"},{"annotations":[70426],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0042853"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving alanine, 2-aminopropanoic acid.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alpha-amino acid metabolic process","termid":"GO:1901605"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04145":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0006520"],"is_obsolete":false,"name":"alanine metabolic process","references_by_uniquename":{"GO_REF:0000041":null,"GO_REF:0000107":null},"synonyms":[{"name":"alanine metabolism","type":"exact"}],"termid":"GO:0006522","terms_by_termid":{"GO:0042852":null,"GO:0042853":null}}


id: PBO:0064229
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase C gamma 2","termid":"PBO:0064229"}


id: PBO:0061080
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NK1 homeobox 2","termid":"PBO:0061080"}


id: GO:1990881
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents, or reduces the frequency, rate or extent of transcription from an RNA polymerase II promoter as a result of DNA damage.","definition_xrefs":["PMID:26150418"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of transcription from RNA polymerase II promoter in response to DNA damage (obsolete GO:1990881)","synonyms":[{"name":"down regulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"down-regulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"downregulation of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"},{"name":"inhibition of transcription from RNA polymerase II promoter in response to DNA damage","type":"exact"}],"termid":"GO:1990881"}


id: GO:0046080
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[81434],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046081"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dUTP, deoxyuridine (5'-)triphosphate.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009211"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055086","GO:0044281"],"is_obsolete":false,"name":"dUTP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dUTP metabolism","type":"exact"}],"termid":"GO:0046080","terms_by_termid":{"GO:0046081":null}}


id: PBO:0111916
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id: MONDO:0007329
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id: PBO:0000742
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id: GO:0106050
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id: MOD:00533
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id: PBO:0042714
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id: MONDO:0016369
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id: PBO:0002221
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id: FYPO:0005398
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id: PBO:0108751
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id: PBO:0073316
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id: PBO:0079881
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id: PBO:0089842
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id: MONDO:0045024
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Includes hyperplasia, neoplastic syndrome and isolated neoplasm diseases as well as precancerous conditions.","direct_ancestors":[{"relation_name":"is_a","term_name":"human disease","termid":"MONDO:0700096"}],"gene_count":95,"genes_by_uniquename":{"SJAG_00031":null,"SJAG_00079":null,"SJAG_00083":null,"SJAG_00213":null,"SJAG_00229":null,"SJAG_00260":null,"SJAG_00289":null,"SJAG_00364":null,"SJAG_00440":null,"SJAG_00490":null,"SJAG_00566":null,"SJAG_00579":null,"SJAG_00610":null,"SJAG_00640":null,"SJAG_00757":null,"SJAG_00980":null,"SJAG_00991":null,"SJAG_00997":null,"SJAG_01008":null,"SJAG_01013":null,"SJAG_01082":null,"SJAG_01111":null,"SJAG_01144":null,"SJAG_01151":null,"SJAG_01156":null,"SJAG_01349":null,"SJAG_01378":null,"SJAG_01410":null,"SJAG_01419":null,"SJAG_01548":null,"SJAG_01620":null,"SJAG_01671":null,"SJAG_01732":null,"SJAG_01748":null,"SJAG_01787":null,"SJAG_01836":null,"SJAG_01837":null,"SJAG_01895":null,"SJAG_01970":null,"SJAG_02049":null,"SJAG_02187":null,"SJAG_02194":null,"SJAG_02200":null,"SJAG_02208":null,"SJAG_02226":null,"SJAG_02231":null,"SJAG_02261":null,"SJAG_02330":null,"SJAG_02398":null,"SJAG_02426":null,"SJAG_02460":null,"SJAG_02527":null,"SJAG_02748":null,"SJAG_02795":null,"SJAG_02818":null,"SJAG_02855":null,"SJAG_02908":null,"SJAG_03081":null,"SJAG_03131":null,"SJAG_03163":null,"SJAG_03424":null,"SJAG_03429":null,"SJAG_03436":null,"SJAG_03453":null,"SJAG_03576":null,"SJAG_03677":null,"SJAG_03689":null,"SJAG_03720":null,"SJAG_03724":null,"SJAG_03787":null,"SJAG_03881":null,"SJAG_03905":null,"SJAG_03920":null,"SJAG_04067":null,"SJAG_04114":null,"SJAG_04183":null,"SJAG_04206":null,"SJAG_04213":null,"SJAG_04266":null,"SJAG_04287":null,"SJAG_04362":null,"SJAG_04394":null,"SJAG_04502":null,"SJAG_04627":null,"SJAG_04699":null,"SJAG_04754":null,"SJAG_04755":null,"SJAG_04843":null,"SJAG_04884":null,"SJAG_04885":null,"SJAG_04995":null,"SJAG_05313":null,"SJAG_05329":null,"SJAG_05346":null,"SJAG_05979":null},"genotype_count":0,"is_obsolete":false,"name":"cancer or benign tumor","references_by_uniquename":{"PB_REF:0000006":null},"synonyms":[{"name":"cell proliferation disorder","type":"related"},{"name":"neoplasm","type":"narrow"}],"termid":"MONDO:0045024","terms_by_termid":{"MONDO:0001056":null,"MONDO:0001187":null,"MONDO:0002629":null,"MONDO:0003789":null,"MONDO:0005575":null,"MONDO:0007154":null,"MONDO:0007205":null,"MONDO:0007256":null,"MONDO:0007273":null,"MONDO:0007356":null,"MONDO:0007485":null,"MONDO:0007681":null,"MONDO:0007763":null,"MONDO:0007767":null,"MONDO:0007768":null,"MONDO:0007888":null,"MONDO:0007908":null,"MONDO:0007925":null,"MONDO:0007959":null,"MONDO:0008018":null,"MONDO:0008093":null,"MONDO:0008097":null,"MONDO:0008170":null,"MONDO:0008192":null,"MONDO:0008566":null,"MONDO:0008612":null,"MONDO:0008903":null,"MONDO:0009050":null,"MONDO:0009136":null,"MONDO:0009578":null,"MONDO:0009693":null,"MONDO:0009759":null,"MONDO:0010159":null,"MONDO:0010518":null,"MONDO:0010584":null,"MONDO:0010621":null,"MONDO:0011014":null,"MONDO:0011121":null,"MONDO:0011508":null,"MONDO:0011544":null,"MONDO:0011655":null,"MONDO:0011705":null,"MONDO:0011719":null,"MONDO:0011740":null,"MONDO:0011789":null,"MONDO:0011962":null,"MONDO:0012004":null,"MONDO:0012041":null,"MONDO:0012249":null,"MONDO:0012252":null,"MONDO:0012953":null,"MONDO:0013092":null,"MONDO:0013108":null,"MONDO:0013199":null,"MONDO:0013224":null,"MONDO:0013510":null,"MONDO:0013519":null,"MONDO:0013520":null,"MONDO:0013521":null,"MONDO:0013582":null,"MONDO:0013602":null,"MONDO:0013699":null,"MONDO:0013710":null,"MONDO:0013767":null,"MONDO:0013806":null,"MONDO:0013872":null,"MONDO:0014038":null,"MONDO:0014056":null,"MONDO:0014368":null,"MONDO:0014600":null,"MONDO:0014630":null,"MONDO:0014690":null,"MONDO:0014937":null,"MONDO:0015278":null,"MONDO:0016368":null,"MONDO:0016369":null,"MONDO:0016419":null,"MONDO:0018874":null,"MONDO:0018881":null,"MONDO:0024498":null,"MONDO:0024517":null,"MONDO:0031057":null,"MONDO:0032747":null,"MONDO:0032771":null,"MONDO:0044300":null,"MONDO:0044792":null,"MONDO:0700275":null,"MONDO:0859046":null,"MONDO:0859346":null,"MONDO:0859575":null,"MONDO:0859576":null,"MONDO:0958013":null,"MONDO:0970950":null,"MONDO:8000024":null},"xrefs":{"Monarch":{"xref_id":"0045024"}}}


id: PBO:0056192
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAGE family member A4","termid":"PBO:0056192"}


id: PBO:0087465
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of a nuclear complex with Noc2p and pre-replicative complexes; the Noc2p-Noc3p complex binds to 66S ribosomal precursors to mediate their maturation and intranuclear transport; binds to chromatin at active replication origins, and is required for pre-RC formation and maintenance during DNA replication licensing","termid":"PBO:0087465"}


id: MONDO:0009772
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete neuro-ophthalmological disease (obsolete MONDO:0015368)","termid":"MONDO:0015368"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oculorenocerebellar syndrome","secondary_identifiers":["OMIM:257970","MEDGEN:340516","UMLS:C1850331","MESH:C537739","GARD:4050","Orphanet:2715"],"synonyms":[{"name":"ORC syndrome","type":"related"},{"name":"absence of the cerebellar granular layer, intellectual disability, tapetoretinal degeneration and progressive glomerulopathy","type":"related"},{"name":"absence of the cerebellar granular layer, mental retardation, tapetoretinal degeneration and progressive glomerulopathy","type":"related"},{"name":"oculorenocerebellar syndrome","type":"exact"}],"termid":"MONDO:0009772","xrefs":{"Monarch":{"xref_id":"0009772"}}}


id: PBO:0003955
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acetolactate synthase regulatory unit (predicted)","termid":"PBO:0003955"}


id: GO:0080052
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a histidine stimulus.","definition_xrefs":["PMID:15889294"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to amino acid","termid":"GO:0043200"},{"relation_name":"is_a","term_name":"response to nitrogen compound","termid":"GO:1901698"},{"relation_name":"is_a","term_name":"response to oxygen-containing compound","termid":"GO:1901700"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to histidine","termid":"GO:0080052"}


id: FYECO:0000181
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which glucose was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ glucose","termid":"FYECO:0000181"}


id: FYPO:0004764
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the meiotic spindle pole body is normal (i.e. indistinguishable from wild type) during the first meiotic nuclear division.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein localization to meiotic spindle pole body","termid":"FYPO:0003541"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0000138","FYPO:0000257"],"is_obsolete":false,"name":"normal protein localization to meiotic spindle pole body during meiosis I","synonyms":[{"name":"normal protein localisation to meiotic spindle pole body during meiosis I","type":"exact"},{"name":"normal protein localization to meiotic SPB during meiosis I","type":"exact"},{"name":"normal protein localization to meiotic spindle pole body during first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0004764"}


id: PBO:0044697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DDX3 interacting lncRNA 1","termid":"PBO:0044697"}


id: GO:0006479
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The addition of a methyl group to a protein amino acid. A methyl group is derived from methane by the removal of a hydrogen atom.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein alkylation","termid":"GO:0008213"},{"relation_name":"is_a","term_name":"macromolecule methylation","termid":"GO:0043414"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"protein methylation","secondary_identifiers":["Reactome:R-HSA-8876725"],"synonyms":[{"name":"protein amino acid methylation","type":"exact"}],"termid":"GO:0006479"}


id: PBO:0079761
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UEV and lactate/malate dehyrogenase domains","termid":"PBO:0079761"}


id: MONDO:0001671
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Accumulation of mucus within the appendix.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestinal disorder","termid":"MONDO:0005020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"mucocele of appendix","secondary_identifiers":["icd11.foundation:159513245","MEDGEN:10116","NCIT:C3241","ICD9:543.9","SCTID:53773002","UMLS:C0026684","DOID:13248"],"synonyms":[{"name":"Appendicele mucocele","type":"exact"},{"name":"appendiceal mucocele","type":"exact"},{"name":"mucocele of the appendix","type":"exact"}],"termid":"MONDO:0001671","xrefs":{"Monarch":{"xref_id":"0001671"}}}


id: FYPO:0004493
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce a cell that undergoes a single round of cell division to produce daughter cells that are smaller than normal, which then die.","definition_xrefs":["PMID:8367300","PomBase:jh","PomBase:mah","PomBase:vw"],"direct_ancestors":[{"relation_name":"has_part","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"small vegetative cell","termid":"FYPO:0000645"},{"relation_name":"is_a","term_name":"inviable vegetative cell with abnormal cell morphology","termid":"FYPO:0002273"},{"relation_name":"is_a","term_name":"inviable after spore germination, single cell division","termid":"FYPO:0002280"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000004"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0000002","FYPO:0000005","FYPO:0001985","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, single cell division, small cell","synonyms":[{"name":"inviable after spore germination, single cell division, decreased cell size","type":"exact"},{"name":"inviable after spore germination, single cell division, reduced cell size","type":"exact"},{"name":"inviable following spore germination, single cell division, small cell","type":"exact"},{"name":"inviable germinated spore, single cell division, small cell","type":"exact"},{"name":"lethal after spore germination, single cell division, small cell","type":"exact"}],"termid":"FYPO:0004493"}


id: PATO:0001828
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A biological sex quality inhering in an individual or a population by virtue of having internal reproductive organs of male and external sexual characteristics of female.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pseudohermaphrodite","termid":"PATO:0001827"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"male pseudohermaphrodite","termid":"PATO:0001828"}


id: MOD:01855
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively adds two oxygen atoms to a sulfur atom of a residue without removing hydrogen atoms.","definition_xrefs":["PubMed:18688235"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sulfur oxygenated residue","termid":"MOD:00680"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sulfur dioxygenated residue","termid":"MOD:01855"}


id: GO:0050915
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events required to receive a sour taste stimulus, convert it to a molecular signal, and recognize and characterize the signal. This is a neurological process.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensory perception of taste","termid":"GO:0050909"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory perception of sour taste","synonyms":[{"name":"sour taste perception","type":"exact"}],"termid":"GO:0050915"}


id: GO:0046772
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The envelopment of a virus, in which the naked capsid evaginates from the host outer nuclear membrane system, thus acquiring a membrane envelope.","definition_xrefs":["ISBN:0072370319"],"direct_ancestors":[{"relation_name":"is_a","term_name":"viral budding from nuclear membrane","termid":"GO:0046765"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"viral budding from outer nuclear membrane","synonyms":[{"name":"outer nuclear membrane viral budding during viral capsid envelopment","type":"related"},{"name":"viral budding from outer nuclear membrane during viral capsid envelopment","type":"related"},{"name":"virus budding from outer nuclear membrane by viral capsid envelopment","type":"exact"},{"name":"virus budding from outer nuclear membrane during viral capsid envelopment","type":"related"}],"termid":"GO:0046772"}


id: GO:0016008
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The larger of the two mitochondrial derivatives that arise by the unfolding of the Nebenkern during flagellum elongation; the major mitochondrial derivative is ovoid and darker than the minor derivative.","definition_xrefs":["GOC:mah","PMID:17123504","PMID:30802236","PMID:24211517"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial derivative","termid":"GO:0016007"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"major mitochondrial derivative","termid":"GO:0016008"}


id: GO:0030693
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of a peptide bond on the carboxyl side of an aspartate residue.","definition_xrefs":["PMID:10872455"],"gene_count":0,"genotype_count":0,"name":"obsolete caspase activity (obsolete GO:0030693)","synonyms":[{"name":"caspase activity","type":"exact"},{"name":"caspase-1 activity","type":"narrow"},{"name":"caspase-10 activity","type":"narrow"},{"name":"caspase-2 activity","type":"narrow"},{"name":"caspase-3 activity","type":"narrow"},{"name":"caspase-4 activity","type":"narrow"},{"name":"caspase-5 activity","type":"narrow"},{"name":"caspase-6 activity","type":"narrow"},{"name":"caspase-7 activity","type":"narrow"},{"name":"caspase-8 activity","type":"narrow"},{"name":"caspase-9 activity","type":"narrow"},{"name":"effector caspase activity","type":"narrow"},{"name":"signaling (initiator) caspase activity","type":"narrow"}],"termid":"GO:0030693"}


id: FYPO:0007627
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype which the occurrence of an RNA catabolic process is decreased when the cell is subject to glucose starvation.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA catabolic process","termid":"FYPO:0003552"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000294"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0000294","FYPO:0000002"],"is_obsolete":false,"name":"decreased RNA catabolic process during glucose starvation","synonyms":[{"name":"decreased RNA breakdown process during glucose starvation","type":"exact"},{"name":"decreased RNA catabolic process during glucose depletion","type":"exact"},{"name":"decreased RNA catabolic process during glucose deprivation","type":"exact"},{"name":"decreased RNA catabolic process during glucose limitation","type":"exact"},{"name":"decreased RNA catabolism during glucose starvation","type":"exact"},{"name":"decreased RNA degradation during glucose starvation","type":"exact"},{"name":"reduced RNA catabolic process during glucose starvation","type":"exact"}],"termid":"FYPO:0007627"}


id: PBO:0061710
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear transport factor 2 pseudogene 5","termid":"PBO:0061710"}


id: PATO:0000291
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000291 relative respiratory rate (obsolete PATO:0000291)","termid":"PATO:0000291"}


id: PBO:0026820
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_protein_localization_to_endosome","termid":"PBO:0026820"}


id: GO:0102006
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: 4-methyl-2-oxopentanoate + coenzyme A(4-) + NAD(1-) = isovaleryl-CoA(4-) + carbon dioxide + NADH(2-).","definition_xrefs":["GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete 4-methyl-2-oxopentanoate dehydrogenase activity (obsolete GO:0102006)","termid":"GO:0102006"}


id: MONDO:0020614
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete blood group--lutheran system (obsolete MONDO:0020614)","secondary_identifiers":["OMIM:111200"],"synonyms":[{"name":"Auberger System","type":"related"},{"name":"BLOOD GROUP--LUTHERAN SYSTEM","type":"related"},{"name":"LU","type":"related"},{"name":"blood group, Auberger system","type":"exact"},{"name":"blood group, Lutheran system","type":"exact"}],"termid":"MONDO:0020614","xrefs":{"Monarch":{"xref_id":"0020614"}}}


id: PBO:0068127
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 434","termid":"PBO:0068127"}


id: PBO:0047193
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 210 member A","termid":"PBO:0047193"}


id: PBO:0029114
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_mitotic_cell_cycle_process","termid":"PBO:0029114"}


id: GO:1901780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of pentalenolactone.","definition_xrefs":["MetaCyc:PWY-6915","PMID:17178094","GOC:TermGenie","GOC:yaf","UniPathway:UPA00974"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid biosynthetic process","termid":"GO:0016106"},{"relation_name":"is_a","term_name":"monocarboxylic acid biosynthetic process","termid":"GO:0072330"},{"relation_name":"is_a","term_name":"lactone biosynthetic process","termid":"GO:1901336"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"pentalenolactone metabolic process","termid":"GO:1901778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"pentalenolactone biosynthetic process","synonyms":[{"name":"pentalenolactone anabolism","type":"exact"},{"name":"pentalenolactone biosynthesis","type":"exact"},{"name":"pentalenolactone formation","type":"exact"},{"name":"pentalenolactone synthesis","type":"exact"}],"termid":"GO:1901780"}


id: PR:Q9P7T1
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- sib1 gene.","definition_xrefs":["UniProtKB:Q9P7T1","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hydroxamate-type ferrichrome siderophore peptide synthetase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23G3.02c","synonyms":[{"name":"Spom972h-sib1","type":"exact"}],"termid":"PR:Q9P7T1"}


id: GO:1903608
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process in which a protein is transported to, or maintained in, a location within a cytoplasmic stress granule.","definition_xrefs":["PMID:24755092","GOC:TermGenie","GO_REF:0000087"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to organelle","termid":"GO:0033365"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization to cytoplasmic stress granule","synonyms":[{"name":"protein localisation in cytoplasmic stress granule","type":"exact"},{"name":"protein localisation to cytoplasmic stress granule","type":"exact"},{"name":"protein localization in cytoplasmic stress granule","type":"exact"},{"name":"protein localization to stress granule","type":"broad"}],"termid":"GO:1903608"}


id: MONDO:0023015
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"duodenal atresia tetralogy of fallot","termid":"MONDO:0023015","xrefs":{"Monarch":{"xref_id":"0023015"}}}


id: GO:0035862
data:
  {"annotated_genes":["SJAG_04487"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[101002],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0035863"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dITP (deoxyinosine triphosphate (2'-deoxyinosine 5'-triphosphate). dITP is a deoxyinosine phosphate compound having a triphosphate group at the 5'-position.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine deoxyribonucleotide metabolic process","termid":"GO:0009151"},{"relation_name":"is_a","term_name":"purine deoxyribonucleoside triphosphate metabolic process","termid":"GO:0009215"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04487":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0055086","GO:0008150","GO:0044281"],"is_obsolete":false,"name":"dITP metabolic process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"2'-Deoxyinosine 5'-triphosphate metabolic process","type":"exact"},{"name":"2'-Deoxyinosine-5'-triphosphate metabolic process","type":"exact"},{"name":"dITP metabolism","type":"exact"},{"name":"deoxyinosine 5'-triphosphate metabolic process","type":"exact"},{"name":"deoxyinosine triphosphate (2'-deoxyinosine 5'-triphosphate) metabolic process","type":"exact"}],"termid":"GO:0035862","terms_by_termid":{"GO:0035863":null}}


id: GO:0030083
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A pigment protein complex that forms part of the photosystem I associated light-harvesting complex I; contains two proteins (usually about 24 and 21.5 kDa); has a fluorescence maximum between 680 and 690 nm.","definition_xrefs":["PMID:8825475"],"direct_ancestors":[{"relation_name":"is_a","term_name":"PSI associated light-harvesting complex I","termid":"GO:0009518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0032991","GO:0005575","GO:0005737"],"is_obsolete":false,"name":"PSI associated light-harvesting complex I, LHCIa subcomplex","termid":"GO:0030083"}


id: GO:1902055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of neosartoricin biosynthetic process.","definition_xrefs":["PMID:23368997","GOC:di","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of polyketide biosynthetic process","termid":"GO:1900734"},{"relation_name":"is_a","term_name":"regulation of neosartoricin biosynthetic process","termid":"GO:1902053"},{"relation_name":"is_a","term_name":"positive regulation of alcohol biosynthetic process","termid":"GO:1902932"},{"relation_name":"positively_regulates","term_name":"neosartoricin biosynthetic process","termid":"GO:1902050"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0019748"},{"rel_name":"positively_regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0019748"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"positive regulation of neosartoricin biosynthetic process","synonyms":[{"name":"activation of neosartoricin anabolism","type":"exact"},{"name":"activation of neosartoricin biosynthesis","type":"exact"},{"name":"activation of neosartoricin biosynthetic process","type":"narrow"},{"name":"activation of neosartoricin formation","type":"exact"},{"name":"activation of neosartoricin synthesis","type":"exact"},{"name":"positive regulation of neosartoricin anabolism","type":"exact"},{"name":"positive regulation of neosartoricin biosynthesis","type":"exact"},{"name":"positive regulation of neosartoricin formation","type":"exact"},{"name":"positive regulation of neosartoricin synthesis","type":"exact"},{"name":"up regulation of neosartoricin anabolism","type":"exact"},{"name":"up regulation of neosartoricin biosynthesis","type":"exact"},{"name":"up regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"up regulation of neosartoricin formation","type":"exact"},{"name":"up regulation of neosartoricin synthesis","type":"exact"},{"name":"up-regulation of neosartoricin anabolism","type":"exact"},{"name":"up-regulation of neosartoricin biosynthesis","type":"exact"},{"name":"up-regulation of neosartoricin biosynthetic process","type":"exact"},{"name":"up-regulation of neosartoricin formation","type":"exact"},{"name":"up-regulation of neosartoricin synthesis","type":"exact"},{"name":"upregulation of neosartoricin anabolism","type":"exact"},{"name":"upregulation of neosartoricin biosynthesis","type":"exact"},{"name":"upregulation of neosartoricin biosynthetic process","type":"exact"},{"name":"upregulation of neosartoricin formation","type":"exact"},{"name":"upregulation of neosartoricin synthesis","type":"exact"}],"termid":"GO:1902055"}


id: PR:Q9P7H9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC105.03c gene.","definition_xrefs":["PRO:DNx","UniProtKB:Q9P7H9"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized transcriptional regulatory protein C105.03c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC105.03c","synonyms":[{"name":"Spom972h-SPAC105.03c","type":"exact"}],"termid":"PR:Q9P7H9"}


id: PBO:0004703
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Gcp Four Homolog","termid":"PBO:0004703"}


id: MONDO:0015510
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare genetic respiratory system disease.","gene_count":0,"genotype_count":0,"name":"obsolete rare genetic respiratory disease (obsolete MONDO:0015510)","secondary_identifiers":["Orphanet:156610"],"synonyms":[{"name":"rare genetic respiratory system disease","type":"exact"}],"termid":"MONDO:0015510","xrefs":{"Monarch":{"xref_id":"0015510"}}}


id: MOD:01396
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-proline residue to a 5-hydroxy-3-methyl-L-proline.","definition_xrefs":["PubMed:8557573","RESID:AA0473","PubMed:7592021"],"direct_ancestors":[{"relation_name":"has_functional_parent","term_name":"monohydroxylated proline","termid":"MOD:01024"},{"relation_name":"has_functional_parent","term_name":"monomethylated proline","termid":"MOD:01417"},{"relation_name":"is_a","term_name":"modified L-proline residue","termid":"MOD:00915"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"5-hydroxy-3-methyl-L-proline (Pro)","synonyms":[{"name":"(2S,3S,5Xi)-5-hydroxy-3-methylpyrrolidine-2-carboxylic acid","type":"exact"},{"name":"5-hydroxy-3-methyl-L-proline","type":"exact"},{"name":"5-hydroxy-3-methylproline","type":"exact"},{"name":"5Hy3MePro","type":"exact"},{"name":"MOD_RES 5-hydroxy-3-methylproline (Ile)","type":"exact"},{"name":"beta-methyl-delta-hydroxyproline","type":"exact"}],"termid":"MOD:01396"}


id: GO:1904937
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a sensory neuron from one site to another.","definition_xrefs":["PMID:18622031","GOC:ah","GOC:TermGenie","GO_REF:0000091"],"direct_ancestors":[{"relation_name":"is_a","term_name":"neuron migration","termid":"GO:0001764"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"sensory neuron migration","termid":"GO:1904937"}


id: PBO:0066067
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RARA antisense RNA 1","termid":"PBO:0066067"}


id: PBO:0016933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces specific protein Mug68","termid":"PBO:0016933"}


id: PBO:0070925
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L17 pseudogene 33","termid":"PBO:0070925"}


id: GO:0019695
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving choline (2-hydroxyethyltrimethylammonium), an amino alcohol that occurs widely in living organisms as a constituent of certain types of phospholipids and in the neurotransmitter acetylcholine.","definition_xrefs":["GOC:jl","ISBN:0192801023"],"direct_ancestors":[{"relation_name":"is_a","term_name":"metabolic process","termid":"GO:0008152"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"choline metabolic process","synonyms":[{"name":"choline metabolism","type":"exact"}],"termid":"GO:0019695"}


id: PBO:0062668
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 13 subfamily J member 1","termid":"PBO:0062668"}


id: PBO:0086506
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative protein involved in sphingolipid biosynthesis; not an essential gene; YOR365C has a paralog, FLC2, that arose from the whole genome duplication","termid":"PBO:0086506"}


id: PBO:0055111
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2530","termid":"PBO:0055111"}


id: GO:0050227
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 2-amino-4-hydroxypteridine + O2 = 2-amino-4,7-dihydroxypteridine + unknown.","definition_xrefs":["RHEA:12777"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on CH or CH2 groups, oxygen as acceptor","termid":"GO:0016727"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"pteridine oxidase activity","secondary_identifiers":["MetaCyc:PTERIDINE-OXIDASE-RXN","EC:1.17.3.1"],"synonyms":[{"name":"2-amino-4-hydroxypteridine:oxygen oxidoreductase (7-hydroxylating)","type":"related"}],"termid":"GO:0050227"}


id: MONDO:0005403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete neonatal systemic lupus erthematosus (obsolete MONDO:0005403)","termid":"MONDO:0005403","xrefs":{"Monarch":{"xref_id":"0005403"}}}


id: PBO:0058168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4463","termid":"PBO:0058168"}


id: PBO:0003806
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"2-oxoglutarate dehydrogenase (lipoamide) (e1 component of oxoglutarate dehydrogenase complex) (predicted)","termid":"PBO:0003806"}


id: PBO:0039172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"A-kinase anchoring protein 4","termid":"PBO:0039172"}


id: PBO:0082009
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger SWIM-type containing 7","termid":"PBO:0082009"}


id: PBO:0058514
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 5702","termid":"PBO:0058514"}


id: PBO:0074681
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, H/ACA box 63C","termid":"PBO:0074681"}


id: PR:O43091
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A decaprenyl-diphosphate synthase subunit 1 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO02552","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"decaprenyl-diphosphate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBPJ4664.01","secondary_identifiers":["UniProtKB:O43091"],"synonyms":[{"name":"Spom972h-PDSS1","type":"exact"},{"name":"all-trans-decaprenyl-diphosphate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"decaprenyl pyrophosphate synthase subunit 1 (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43091"}


id: GO:0008713
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: heptosyl-KDO2-lipid A + ADP-L-glycero-beta-D-manno-heptose = heptosyl2-KDO2-lipid A + ADP + H+.","definition_xrefs":["RHEA:74071"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lipopolysaccharide heptosyltransferase activity","termid":"GO:0008920"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016740","GO:0016757","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"ADP-heptose-lipopolysaccharide heptosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-22477","EC:2.4.99.24"],"synonyms":[{"name":"ADP-heptose:LPS heptosyltransferase activity","type":"exact"}],"termid":"GO:0008713"}


id: PBO:0035969
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_H4-K20_methylation_during_vegetative_growth","termid":"PBO:0035969"}


id: PBO:0034128
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-synapsed_by_via_type_Is_bouton","termid":"PBO:0034128"}


id: PBO:0064581
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"POTE ankyrin domain family member B3","termid":"PBO:0064581"}


id: MONDO:0054761
data:
  {"annotated_genes":["SJAG_00773"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87967],"is_not":false,"summary":null,"term":"MONDO:0054761"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive primary microcephaly","termid":"MONDO:0016660"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00773":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0006025"],"is_obsolete":false,"name":"microcephaly 20, primary, autosomal recessive","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:617914","MEDGEN:1641618","DOID:0051031","GARD:16268","UMLS:C4693572"],"synonyms":[{"name":"MCPH20","type":"related"},{"name":"microcephaly 20, PRIMARY, autosomal recessive","type":"related"}],"termid":"MONDO:0054761","terms_by_termid":{"MONDO:0054761":null},"xrefs":{"Monarch":{"xref_id":"0054761"}}}


id: PATO:0002123
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Being smallest in amount, extent or degree.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"present","termid":"PATO:0000467"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"minimal","termid":"PATO:0002123"}


id: PBO:0081749
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 679","termid":"PBO:0081749"}


id: MONDO:1010465
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Patent ductus arteriosus that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"patent ductus arteriosus, non-human animal","termid":"MONDO:1010017"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"patent ductus arteriosus, dog","secondary_identifiers":["OMIA:000779-9615"],"termid":"MONDO:1010465","xrefs":{"Monarch":{"xref_id":"1010465"}}}


id: PBO:0030606
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_calcium_starvation","termid":"PBO:0030606"}


id: PBO:0091324
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by human SSB","termid":"PBO:0091324"}


id: PBO:0041720
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"calumenin","termid":"PBO:0041720"}


id: PBO:0017792
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cation diffusion family zinc transmembrane transporter Cis4","termid":"PBO:0017792"}


id: MONDO:0100057
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subset of exercise-induced anaphylaxis in which symptoms develop if exertion takes place within a few hours of eating a specific food. In the case of food-dependent exercise-induced anaphylaxis, neither the food nor the exercise alone is enough to cause anaphylaxis.","definition_xrefs":["GARD:0006392"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exercise-induced anaphylaxis","termid":"MONDO:0100056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"food-dependent exercise-induced anaphylaxis","secondary_identifiers":["MEDGEN:1780757","icd11.foundation:854135859","UMLS:C5546138"],"termid":"MONDO:0100057","xrefs":{"Monarch":{"xref_id":"0100057"}}}


id: SO:0000083
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"DNA belonging to the macronuclei of ciliates.","direct_ancestors":[{"relation_name":"is_a","term_name":"organelle_sequence","termid":"SO:0000736"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"macronuclear_sequence","synonyms":[{"name":"macronuclear sequence","type":"exact"}],"termid":"SO:0000083"}


id: PBO:0029747
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_calcium_export","termid":"PBO:0029747"}


id: SO:0002251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS region corresponding to a signal peptide of a polypeptide.","direct_ancestors":[{"relation_name":"is_a","term_name":"CDS_region","termid":"SO:0000851"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"signal_peptide_region_of_CDS","synonyms":[{"name":"INSDC_feature:sig_peptide","type":"exact"},{"name":"Signal peptide region of CDS","type":"exact"}],"termid":"SO:0002251"}


id: FYPO:0001189
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to cilofungin. Cells stop growing (and may die) at a concentration of cilofungin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to echinocandin","termid":"FYPO:0007947"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447","FYPO:0000003"],"is_obsolete":false,"name":"sensitive to cilofungin","synonyms":[{"name":"hypersensitive to cilofungin","type":"exact"},{"name":"sensitive to cilofungin during mitotic cell cycle","type":"related"},{"name":"sensitive to cilofungin during vegetative growth","type":"exact"}],"termid":"FYPO:0001189"}


id: PBO:0036284
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complemented by Aspergillus niger clxA","termid":"PBO:0036284"}


id: PBO:0024798
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-molecularly_controls","termid":"PBO:0024798"}


id: GO:0008910
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: ATP + kanamycin = ADP + 2 H+ + kanamycin 3'-phosphate.","definition_xrefs":["RHEA:24256","EC:2.7.1.95"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aminoglycoside phosphotransferase activity","termid":"GO:0034071"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016301"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016301","GO:0016740"],"is_obsolete":false,"name":"kanamycin kinase activity","secondary_identifiers":["MetaCyc:KANAMYCIN-KINASE-RXN","KEGG_REACTION:R01888"],"synonyms":[{"name":"APH(3') activity","type":"broad"},{"name":"ATP:kanamycin 3'-O-phosphotransferase activity","type":"related"},{"name":"aminoglycoside 3'-phosphotransferase activity","type":"broad"},{"name":"kanamycin kinase (phosphorylating)","type":"related"},{"name":"neomycin phosphotransferase activity","type":"related"},{"name":"neomycin-kanamycin phosphotransferase activity","type":"related"}],"termid":"GO:0008910"}


id: MONDO:0800384
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A heavy metal poisoning that is caused by exposure to cesium.","definition_xrefs":["MONDO:patterns/patterns/poisoning"],"direct_ancestors":[{"relation_name":"is_a","term_name":"heavy metal poisoning","termid":"MONDO:0023305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cesium poisoning","termid":"MONDO:0800384","xrefs":{"Monarch":{"xref_id":"0800384"}}}


id: PATO:0001373
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A reflectivity quality inhering in a bearer by virtue of the bearer's reflecting lots of light.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reflectivity","termid":"PATO:0001297"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glistening","synonyms":[{"name":"glossy","type":"exact"},{"name":"shiny","type":"exact"}],"termid":"PATO:0001373"}


id: PBO:0074880
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 59B","termid":"PBO:0074880"}


id: GO:0090696
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Development, taking place during the post-embryonic phase of a plant tissue or tissues that work together to perform a specific function or functions. Development pertains to the process whose specific outcome is the progression of a structure over time, from its formation to the mature structure. Organs are commonly observed as visibly distinct structures, but may also exist as loosely associated clusters of cells that work together to perform a specific function or functions.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"plant organ development","termid":"GO:0099402"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"post-embryonic plant organ development","termid":"GO:0090696"}


id: PBO:0030597
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-altered_level_of_substance_in_cytosol","termid":"PBO:0030597"}


id: GO:0050727
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the inflammatory response, the immediate defensive reaction (by vertebrate tissue) to infection or injury caused by chemical or physical agents.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of defense response","termid":"GO:0031347"},{"relation_name":"is_a","term_name":"regulation of response to external stimulus","termid":"GO:0032101"},{"relation_name":"regulates","term_name":"inflammatory response","termid":"GO:0006954"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of inflammatory response","termid":"GO:0050727"}


id: GO:0072324
data:
  {"annotated_genes":["SJAG_02718","SJAG_01017","SJAG_00146","SJAG_01855"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[95561,96022,97179,113366],"is_not":false,"summary":null,"term":"GO:0072324"}]},"cv_name":"cellular_component","definition":"Ascus cytoplasm that is not packaged into ascospores.","definition_xrefs":["GOC:mcc","DOI:10.1016/S0953-7562(96)80057-8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00146":null,"SJAG_01017":null,"SJAG_01855":null,"SJAG_02718":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"ascus epiplasm","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0072324","terms_by_termid":{"GO:0072324":null}}


id: MONDO:0019735
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A syndrome characterized by pain, stiffness, and tenderness of the proximal muscle groups including the shoulder, pelvic girdle and the neck. There is no muscle atrophy and muscle biopsies do not reveal pathologic changes. Additional signs and symptoms include low grade fever, fatigue and depression.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"myopathy","termid":"MONDO:0005336"},{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"rheumatic disorder","termid":"MONDO:0005554"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"polymyalgia rheumatica","secondary_identifiers":["ICD9:725","EFO:0008518","NCIT:C85018","MEDGEN:19393","MedDRA:10068240","icd11.foundation:103940897","MESH:D011111","GARD:4704","NORD:1593","DOID:853","ICD10CM:M35.3","Orphanet:93569","SCTID:65323003","UMLS:C0032533"],"synonyms":[{"name":"polymyalgia rheumatica","type":"exact"},{"name":"rhizomelic pseudopolyarthritis","type":"exact"}],"termid":"MONDO:0019735","xrefs":{"Monarch":{"xref_id":"0019735"}}}


id: GO:0007442
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the hindgut are generated and organized.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"anatomical structure morphogenesis","termid":"GO:0009653"},{"relation_name":"part_of","term_name":"digestive tract morphogenesis","termid":"GO:0048546"},{"relation_name":"part_of","term_name":"hindgut development","termid":"GO:0061525"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hindgut morphogenesis","termid":"GO:0007442"}


id: PBO:0053429
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 374","termid":"PBO:0053429"}


id: PATO:0000918
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A 3-D extent quality inhering in a bearer by virtue of the bearer's amount of 3-dimensional space it occupies.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3-D extent","termid":"PATO:0001710"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"volume","termid":"PATO:0000918"}


id: PBO:0120804
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"QTMAN antisense RNA 1","termid":"PBO:0120804"}


id: GO:0003348
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a cardiac endothelial cell.","definition_xrefs":["GOC:dph","PMID:18722343"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cardiocyte differentiation","termid":"GO:0035051"},{"relation_name":"is_a","term_name":"endothelial cell differentiation","termid":"GO:0045446"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cardiac endothelial cell differentiation","termid":"GO:0003348"}


id: GO:0071547
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A P granule that contains the PIWIL4-TDRD9 module, a set of proteins that act in the secondary piRNA pathway.","definition_xrefs":["GOC:sp","PMID:20011505"],"direct_ancestors":[{"relation_name":"is_a","term_name":"P granule","termid":"GO:0043186"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"part_of","termid":"GO:0005737"}],"interesting_parent_ids":["GO:0005737","GO:0005575"],"is_obsolete":false,"name":"piP-body","termid":"GO:0071547"}


id: PBO:0080602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 36","termid":"PBO:0080602"}


id: PBO:0080489
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"von Willebrand factor A domain containing 8","termid":"PBO:0080489"}


id: PR:P21534
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A cytochrome c oxidase subunit 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22888:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit 2 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPMIT.11","secondary_identifiers":["UniProtKB:P21534"],"synonyms":[{"name":"SPMIT.11","type":"related"},{"name":"Spom972h-MT-CO2","type":"exact"},{"name":"cytochrome c oxidase polypeptide II (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:P21534"}


id: MONDO:0000144
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pregnancy loss, recurrent, susceptibility","termid":"MONDO:0000144","xrefs":{"Monarch":{"xref_id":"0000144"}}}


id: GO:0032763
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate, or extent of mast cell cytokine production.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cytokine production involved in immune response","termid":"GO:0002718"},{"relation_name":"regulates","term_name":"mast cell cytokine production","termid":"GO:0032762"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"regulation of mast cell cytokine production","termid":"GO:0032763"}


id: GO:0016576
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The modification of histones by removal of phosphate groups.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete histone dephosphorylation (obsolete GO:0016576)","termid":"GO:0016576"}


id: GO:0060824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The series of molecular signals generated as a consequence of a retinoic acid receptor binding to one of its physiological ligands that contributes to the formation of the anterior/posterior pattern of the neural plate.","definition_xrefs":["GOC:sdb_2009","GOC:tb","GOC:dph"],"gene_count":0,"genotype_count":0,"name":"obsolete retinoic acid receptor signaling pathway involved in neural plate anterior/posterior pattern formation (obsolete GO:0060824)","synonyms":[{"name":"retinoic acid receptor signalling pathway involved in neural plate anterior/posterior pattern formation","type":"exact"}],"termid":"GO:0060824"}


id: GO:0047414
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: (2Z)-2-(acetamidomethylene)-3-(hydroxymethyl)succinate + 2 H2O + H+ = 2-(hydroxymethyl)-4-oxobutanoate + acetate + CO2 + NH4.","definition_xrefs":["EC:3.5.1.66","RHEA:17677"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides","termid":"GO:0016811"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016810"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016787","GO:0003824","GO:0003674","GO:0016810"],"is_obsolete":false,"name":"2-(hydroxymethyl)-3-(acetamidomethylene)succinate hydrolase activity","secondary_identifiers":["KEGG_REACTION:R04397","Wikipedia:2-(hydroxymethyl)-3-(acetamidomethylene)succinate_amidohydrolase_(deaminating\\,_decarboxylating)","MetaCyc:3.5.1.66-RXN"],"synonyms":[{"name":"2-(hydroxymethyl)-3-(acetamidomethylene)succinate amidohydrolase (deaminating, decarboxylating)","type":"related"},{"name":"alpha-hydroxymethyl-alpha'-(N-acetylaminomethylene)succinic acid hydrolase activity","type":"related"},{"name":"compound B hydrolase activity","type":"related"}],"termid":"GO:0047414"}


id: PBO:0004984
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-coding RNA Meu3","termid":"PBO:0004984"}


id: PR:000029043
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DAN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein","termid":"PR:000000001"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Schizosaccharomyces pombe 972h- protein","synonyms":[{"name":"Spom972h- protein","type":"exact"}],"termid":"PR:000029043"}


id: MONDO:0012565
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the PALB2 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0021190","MONDO:0005066","MONDO:0005570","MONDO:0002280","MONDO:0005046"],"is_obsolete":false,"name":"Fanconi anemia complementation group N","secondary_identifiers":["OMIM:610832","GARD:15500","DOID:0111094","MESH:C563657","MEDGEN:372133","UMLS:C1835817"],"synonyms":[{"name":"FANCN","type":"exact"},{"name":"Fanconi Anemia, complementation group type N","type":"exact"},{"name":"Fanconi anaemia caused by mutation in PALB2","type":"exact"},{"name":"Fanconi anaemia complementation group type N","type":"exact"},{"name":"Fanconi anemia caused by mutation in PALB2","type":"exact"},{"name":"Fanconi anemia complementation group N","type":"exact"},{"name":"Fanconi anemia complementation group type N","type":"exact"},{"name":"Fanconi anemia, complementation group N","type":"related"},{"name":"PALB2 Fanconi anaemia","type":"exact"},{"name":"PALB2 Fanconi anemia","type":"exact"}],"termid":"MONDO:0012565","xrefs":{"Monarch":{"xref_id":"0012565"}}}


id: PBO:0066900
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 200","termid":"PBO:0066900"}


id: PBO:0028156
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_cellular_doxorubicin_level","termid":"PBO:0028156"}


id: PBO:0036331
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by human COQ9","termid":"PBO:0036331"}


id: PR:000050399
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A spindle pole body-associated protein cut12 (Schizosaccharomyces pombe) that has been phosphorylated at positions equivalent to Thr-75 and Thr-78 of the amino acid sequence represented by UniProtKB:O59755. Example: UniProtKB:O59755, Thr-75/Thr-78, MOD:00047.","definition_xrefs":["PRO:DAN","PomBase:VW","PMID:23333317"],"direct_ancestors":[{"relation_name":"is_a","term_name":"spindle pole body-associated protein cut12 (Schizosaccharomyces pombe)","termid":"PR:000050397"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cut12/Phos(T75,T78)","pombase_gene_id":"SPBC649.05","synonyms":[{"name":"PomBase_original_PRO_term_name: spindle pole body-associated protein cut12 phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"Spom-cut12/Phos:1","type":"exact"},{"name":"UniProtKB:O59755, Thr-75/Thr-78, MOD:00047","type":"narrow"},{"name":"cut12/Phos(T75,T78)","type":"exact"}],"termid":"PR:000050399"}


id: PBO:0013069
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"functionally complement S. cerevisiae CDC28 when introns removed","termid":"PBO:0013069"}


id: GO:0001771
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The formation of an area of close contact between a lymphocyte (T-, B-, or natural killer cell) and a target cell through the clustering of particular signaling and adhesion molecules and their associated membrane rafts on both the lymphocyte and target cell, which facilitates activation of the lymphocyte, transfer of membrane from the target cell to the lymphocyte, and in some situations killing of the target cell through release of secretory granules and/or death-pathway ligand-receptor interaction.","definition_xrefs":["PMID:11376330","GOC:mgi_curators","PMID:11244041"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell-cell recognition","termid":"GO:0009988"},{"relation_name":"part_of","term_name":"lymphocyte activation","termid":"GO:0046649"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immunological synapse formation","synonyms":[{"name":"formation of immunological synapse","type":"exact"}],"termid":"GO:0001771"}


id: PBO:0077934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTE2 pseudogene 7","termid":"PBO:0077934"}


id: PR:Q9UUJ4
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- rec24 gene.","definition_xrefs":["UniProtKB:Q9UUJ4","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein rec24 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC1952.15c","synonyms":[{"name":"Spom972h-rec24","type":"exact"},{"name":"meiotically up-regulated gene 6 protein (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q9UUJ4"}


id: PBO:0073583
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 1","termid":"PBO:0073583"}


id: PBO:0029973
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_cellular_response_to_gamma_radiation","termid":"PBO:0029973"}


id: SO:0000398
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"U11 snRNA plays a role in splicing of the minor U12-dependent class of eukaryotic nuclear introns, similar to U1 snRNA in the major class spliceosome it base pairs to the conserved 5' splice site sequence.","definition_xrefs":["PMID:9622129"],"direct_ancestors":[{"relation_name":"is_a","term_name":"snRNA","termid":"SO:0000274"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"U11_snRNA","secondary_identifiers":["http://en.wikipedia.org/wiki/U11_snRNA"],"synonyms":[{"name":"U11 small nuclear RNA","type":"exact"},{"name":"U11 snRNA","type":"exact"},{"name":"small nuclear RNA U11","type":"exact"},{"name":"snRNA U11","type":"exact"}],"termid":"SO:0000398"}


id: PBO:0000781
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nucleoporin Nup124","termid":"PBO:0000781"}


id: MONDO:0859376
data:
  {"annotated_genes":["SJAG_02589","SJAG_02447"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89299,89300],"is_not":false,"summary":null,"term":"MONDO:0859376"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"congenital hydrocephalus","termid":"MONDO:0016349"},{"relation_name":"is_a","term_name":"inherited disease susceptibility","termid":"MONDO:0020573"}],"gene_count":2,"genes_by_uniquename":{"SJAG_02447":null,"SJAG_02589":null},"genotype_count":0,"is_obsolete":false,"name":"hydrocephalus, congenital, 5, susceptibility to","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C5830272","OMIM:620241","MEDGEN:1840908"],"termid":"MONDO:0859376","terms_by_termid":{"MONDO:0859376":null},"xrefs":{"Monarch":{"xref_id":"0859376"}}}


id: PATO:0001723
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A female receptivity which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"female receptivity","termid":"PATO:0001720"},{"relation_name":"is_a","term_name":"increased object quality","termid":"PATO:0002305"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased female receptivity","synonyms":[{"name":"high female receptivity","type":"exact"}],"termid":"PATO:0001723"}


id: GO:1904668
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of ubiquitin protein ligase activity.","definition_xrefs":["GOC:TermGenie","PMID:26216882","GOC:vw","GOC:dph","PMID:10921876","GO_REF:0000059"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of ubiquitin-protein transferase activity","termid":"GO:0051443"},{"relation_name":"is_a","term_name":"regulation of ubiquitin protein ligase activity","termid":"GO:1904666"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0070647"},{"rel_name":"regulates","termid":"GO:0070647"}],"interesting_parent_ids":["GO:0008150","GO:0070647"],"is_obsolete":false,"name":"positive regulation of ubiquitin protein ligase activity","secondary_identifiers":["GO:0090623","GO:0051488","GO:0007092","GO:1903835"],"synonyms":[{"name":"activation of APC-Cdc20 complex activity","type":"narrow"},{"name":"activation of APC-fizzy related complex activity","type":"narrow"},{"name":"activation of E3","type":"related"},{"name":"activation of anaphase-promoting complex activity","type":"narrow"},{"name":"activation of protein ubiquitination activity","type":"narrow"},{"name":"activation of ubiquitin ligase activity","type":"narrow"},{"name":"activation of ubiquitin protein ligase activity","type":"narrow"},{"name":"positive regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"positive regulation of E3","type":"related"},{"name":"positive regulation of protein ubiquitination activity","type":"exact"},{"name":"positive regulation of ubiquitin ligase activity","type":"related"},{"name":"up regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"up regulation of E3","type":"related"},{"name":"up regulation of protein ubiquitination activity","type":"exact"},{"name":"up regulation of ubiquitin ligase activity","type":"exact"},{"name":"up regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"up-regulation of APC-fizzy related complex activity","type":"narrow"},{"name":"up-regulation of E3","type":"related"},{"name":"up-regulation of protein ubiquitination activity","type":"exact"},{"name":"up-regulation of ubiquitin ligase activity","type":"exact"},{"name":"up-regulation of ubiquitin protein ligase activity","type":"exact"},{"name":"upregulation of APC-fizzy related complex activity","type":"narrow"},{"name":"upregulation of E3","type":"related"},{"name":"upregulation of protein ubiquitination activity","type":"exact"},{"name":"upregulation of ubiquitin ligase activity","type":"exact"},{"name":"upregulation of ubiquitin protein ligase activity","type":"exact"}],"termid":"GO:1904668"}


id: GO:1990298
data:
  {"annotated_genes":["SJAG_01082","SJAG_02451"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[81817,116546],"is_not":false,"summary":null,"term":"GO:1990298"}]},"cv_name":"cellular_component","definition":"Protein complex that associates with the kinetochores.","definition_xrefs":["PMID:22521786"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01082":null,"SJAG_02451":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"}],"interesting_parent_ids":["GO:0032991","GO:0005575"],"is_obsolete":false,"name":"bub1-bub3 complex","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:1990298","terms_by_termid":{"GO:1990298":null}}


id: MONDO:0011514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Tricuspid atresia is (TA) a rare congenital heart malformation characterized by the congenital agenesis of tricuspid valve leading to severe hypoplasia of right ventricle (functionally univentricular). TA is associated with normally related or transposed great vessels (TGV), an obligatory interatrial connection that is crucial for survival (patent foramen ovale or atrial septal defect, osteum secondum type), ventricular septal defect (in 90% cases), pulmonary outflow obstruction - pulmonary atresia, stenosis or hypoplasia (usually in TA with normally related vessels but also in TGV), aortic coarctation and/or aortic arch interruption (usually in TA with TGV).","definition_xrefs":["Orphanet:1209"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital heart disease","termid":"MONDO:0005453"},{"relation_name":"is_a","term_name":"congenital tricuspid malformation","termid":"MONDO:0020289"},{"relation_name":"is_a","term_name":"cardiogenetic disease","termid":"MONDO:0100547"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005267"}],"interesting_parent_ids":["MONDO:0005267"],"is_obsolete":false,"name":"tricuspid atresia","secondary_identifiers":["MESH:D018785","NANDO:1200706","OMIM:605067","HP:0011662","ICD10CM:Q22.4","NANDO:2100073","MedDRA:10049767","GARD:5274","icd11.foundation:845891723","UMLS:C0243002","MEDGEN:67034","NANDO:1200962","NANDO:2200251","DOID:0080169","NCIT:C85202","SCTID:63042009"],"synonyms":[{"name":"congenital agenesis of the tricuspid valve","type":"related"},{"name":"congenital atresia of tricuspid valve","type":"exact"},{"name":"tricuspid atresia","type":"exact"},{"name":"tricuspid atresia (disease)","type":"exact"},{"name":"tricuspid valve atresia","type":"exact"}],"termid":"MONDO:0011514","xrefs":{"Monarch":{"xref_id":"0011514"}}}


id: PBO:0072171
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S15 pseudogene 8","termid":"PBO:0072171"}


id: PBO:0043151
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"capicua transcriptional repressor pseudogene 19","termid":"PBO:0043151"}


id: PBO:0076755
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"teratocarcinoma-derived growth factor 1 pseudogene 5","termid":"PBO:0076755"}


id: PBO:0042953
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil-helix-coiled-coil-helix domain containing 2 pseudogene 7","termid":"PBO:0042953"}


id: MONDO:0006365
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hamartomatous polyp that occurs in the stomach, small and large intestines, and rarely within the esophagus, nasopharynx and the urinary tract. The Peutz-Jeghers polyps are grossly lobulated and dark. Microscopically, they have a central core of smooth muscle covered by mucosa. The smooth muscle shows tree-like branching. The question of whether or not the Peutz-Jeghers polyp is precancerous is a matter of controversy. The loss of heterozygosity on chromosome 19p (where the responsible gene LKB1 is located) suggests that the increased risk of malignancy may be due to malignant transformation from hamartoma to adenocarcinoma. --2002","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"gastrointestinal hamartoma","termid":"MONDO:0006231"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"Peutz-Jeghers polyp","secondary_identifiers":["NCIT:C4733","MEDGEN:141582","UMLS:C0456487","EFO:1000470"],"synonyms":[{"name":"Peutz Jeghers polyp","type":"exact"},{"name":"Peutz-Jeghers polyp","type":"exact"}],"termid":"MONDO:0006365","xrefs":{"Monarch":{"xref_id":"0006365"}}}


id: PBO:0041267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"complement C1q C chain","termid":"PBO:0041267"}


id: GO:0090251
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process in which a protein is transported to, and/or maintained in, a specific location in a cell that contributes to the establishment of planar polarity.","definition_xrefs":["GOC:dph","GOC:tb","GOC:ascb_2009"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein localization","termid":"GO:0008104"},{"relation_name":"part_of","term_name":"establishment of planar polarity","termid":"GO:0001736"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0008150"],"is_obsolete":false,"name":"protein localization involved in establishment of planar polarity","synonyms":[{"name":"protein localisation involved in establishment of planar polarity","type":"exact"}],"termid":"GO:0090251"}


id: GO:0030031
data:
  {"annotated_genes":["SJAG_01993","SJAG_01943","SJAG_04509","SJAG_02864","SJAG_02700","SJAG_02989","SJAG_03453","SJAG_00514","SJAG_01894","SJAG_01794","SJAG_02379"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[90266,100298,100912,116382,100993,94523],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1904600"},{"annotations":[89902,91879,92855,95485,113420],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1902917"}]},"cv_name":"biological_process","definition":"Formation of a prolongation or process extending from a cell, e.g. a flagellum or axon.","definition_xrefs":["GOC:jl","GOC:mah","PMID:18391171"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular component assembly","termid":"GO:0022607"},{"relation_name":"is_a","term_name":"cell projection organization","termid":"GO:0030030"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00514":null,"SJAG_01794":null,"SJAG_01894":null,"SJAG_01943":null,"SJAG_01993":null,"SJAG_02379":null,"SJAG_02700":null,"SJAG_02864":null,"SJAG_02989":null,"SJAG_03453":null,"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"cell projection assembly","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cell projection biogenesis","type":"related"},{"name":"formation of a cell surface projection","type":"exact"}],"termid":"GO:0030031","terms_by_termid":{"GO:1902917":null,"GO:1904600":null}}


id: MONDO:0001903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tendinitis","termid":"MONDO:0004857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"}],"interesting_parent_ids":["MONDO:0005336"],"is_obsolete":false,"name":"calcific tendinitis","secondary_identifiers":["icd11.foundation:856383808","ICD10CM:M65.2","ICD9:726.11","SCTID:95414005","MEDGEN:636635","UMLS:C0521515","DOID:14181"],"termid":"MONDO:0001903","xrefs":{"Monarch":{"xref_id":"0001903"}}}


id: PBO:0083253
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; identified by sequence comparison with hemiascomycetous yeast species","termid":"PBO:0083253"}


id: PATO:0000451
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000451 pilosity value (obsolete PATO:0000451)","termid":"PATO:0000451"}


id: MONDO:0975871
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"acute myeloid leukemia","termid":"MONDO:0018874"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005046","MONDO:0005570"],"is_obsolete":false,"name":"acute myeloid leukemia with MNX1-ETV6 fusion","secondary_identifiers":["DOID:0070632"],"termid":"MONDO:0975871","xrefs":{"Monarch":{"xref_id":"0975871"}}}


id: GO:1902132
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of (+)-lariciresinol.","definition_xrefs":["GOC:TermGenie","PMID:8910615","PMID:9872995"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lignan biosynthetic process","termid":"GO:0009807"},{"relation_name":"is_a","term_name":"primary alcohol biosynthetic process","termid":"GO:0034309"},{"relation_name":"is_a","term_name":"phenol-containing compound biosynthetic process","termid":"GO:0046189"},{"relation_name":"is_a","term_name":"ether biosynthetic process","termid":"GO:1901503"},{"relation_name":"is_a","term_name":"(+)-lariciresinol metabolic process","termid":"GO:1902130"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0019748","GO:0008150"],"is_obsolete":false,"name":"(+)-lariciresinol biosynthetic process","synonyms":[{"name":"(+)-lariciresinol anabolism","type":"exact"},{"name":"(+)-lariciresinol biosynthesis","type":"exact"},{"name":"(+)-lariciresinol formation","type":"exact"},{"name":"(+)-lariciresinol synthesis","type":"exact"}],"termid":"GO:1902132"}


id: GO:2000353
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of endothelial cell apoptotic process.","definition_xrefs":["GOC:BHF","GOC:mtg_apoptosis","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of apoptotic process","termid":"GO:0043065"},{"relation_name":"is_a","term_name":"regulation of endothelial cell apoptotic process","termid":"GO:2000351"},{"relation_name":"positively_regulates","term_name":"endothelial cell apoptotic process","termid":"GO:0072577"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of endothelial cell apoptotic process","synonyms":[{"name":"positive regulation of apoptosis of endothelial cells","type":"exact"},{"name":"positive regulation of endothelial cell apoptosis","type":"narrow"},{"name":"positive regulation of endothelial cell programmed cell death by apoptosis","type":"exact"},{"name":"positive regulation of killing of endothelial cells","type":"exact"},{"name":"positive regulation of programmed cell death of endothelial cells by apoptosis","type":"exact"},{"name":"positive regulation of programmed cell death, endothelial cells","type":"exact"}],"termid":"GO:2000353"}


id: PBO:0005041
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sad1 interacting factor 1","termid":"PBO:0005041"}


id: PBO:0062772
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 52 subfamily Z member 1 pseudogene","termid":"PBO:0062772"}


id: PBO:0056567
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipin TRP cation channel 2","termid":"PBO:0056567"}


id: GO:0006140
data:
  {"annotated_genes":["SJAG_02785","SJAG_05314","SJAG_04422","SJAG_00685"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[75038,78092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0045820"},{"annotations":[120071],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905707"},{"annotations":[91703],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1905857"},{"annotations":[71970],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006110"},{"annotations":[78091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0043456"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the chemical reactions and pathways involving nucleotides.","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of nucleobase-containing compound metabolic process","termid":"GO:0019219"},{"relation_name":"is_a","term_name":"regulation of phosphate metabolic process","termid":"GO:0019220"},{"relation_name":"is_a","term_name":"regulation of small molecule metabolic process","termid":"GO:0062012"},{"relation_name":"regulates","term_name":"nucleotide metabolic process","termid":"GO:0009117"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00685":null,"SJAG_02785":null,"SJAG_04422":null,"SJAG_05314":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0055086"}],"interesting_parent_ids":["GO:0008150","GO:0044281","GO:0055086"],"is_obsolete":false,"name":"regulation of nucleotide metabolic process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"regulation of nucleotide metabolism","type":"exact"}],"termid":"GO:0006140","terms_by_termid":{"GO:0006110":null,"GO:0043456":null,"GO:0045820":null,"GO:1905707":null,"GO:1905857":null}}


id: GO:0008808
data:
  {"annotated_genes":["SJAG_04317"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[95054],"is_not":false,"summary":null,"term":"GO:0008808"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: phosphatidylglycerol + phosphatidylglycerol = diphosphatidylglycerol (cardiolipin) + glycerol.","definition_xrefs":["GOC:jl","RHEA:31451"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidyltransferase activity","termid":"GO:0030572"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04317":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016780"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016780","GO:0003674","GO:0003824","GO:0016740"],"is_obsolete":false,"name":"cardiolipin synthase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0043788","MetaCyc:CARDIOLIPSYN-RXN"],"synonyms":[{"name":"cardiolipin synthase 2 activity","type":"related"},{"name":"cardiolipin synthetase 2 activity","type":"related"},{"name":"cardiolipin synthetase activity","type":"broad"},{"name":"diphosphatidylglycerol synthase activity","type":"exact"}],"termid":"GO:0008808","terms_by_termid":{"GO:0008808":null}}


id: GO:0090455
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of ornithine into the vacuole across the vacuolar membrane.","definition_xrefs":["GOC:tb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid transmembrane transport","termid":"GO:0003333"},{"relation_name":"is_a","term_name":"ornithine transport","termid":"GO:0015822"},{"relation_name":"is_a","term_name":"vacuolar transmembrane transport","termid":"GO:0034486"},{"relation_name":"is_a","term_name":"carboxylic acid transmembrane transport","termid":"GO:1905039"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0051179","GO:0055085","GO:0006810","GO:0008150"],"is_obsolete":false,"name":"ornithine transmembrane import into vacuole","synonyms":[{"name":"vacuolar ornithine import","type":"related"}],"termid":"GO:0090455"}


id: FYPO:0002578
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of hydroxyurea than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000139","FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0005447"],"is_obsolete":false,"name":"resistance to hydroxyurea","synonyms":[{"name":"resistance to HU","type":"exact"},{"name":"resistance to hydroxyurea during mitotic cell cycle","type":"related"},{"name":"resistance to hydroxyurea during vegetative growth","type":"exact"},{"name":"resistant to hydroxyurea","type":"exact"}],"termid":"FYPO:0002578"}


id: MONDO:1011634
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"self-mutilation syndrome, non-human animal","secondary_identifiers":["OMIA:001161"],"termid":"MONDO:1011634","xrefs":{"Monarch":{"xref_id":"1011634"}}}


id: GO:0035076
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A nuclear receptor-mediated signaling pathway initiated by an ecdysone binding to an intracellular receptor of the nuclear receptor protein family, and ending with regulation of a downstream cellular process, e.g. transcription.","definition_xrefs":["GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclear receptor-mediated steroid hormone signaling pathway","termid":"GO:0030518"},{"relation_name":"part_of","term_name":"cellular response to ecdysone","termid":"GO:0071390"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"ecdysone receptor signaling pathway","synonyms":[{"name":"ecdysone receptor-mediated signalling pathway","type":"exact"},{"name":"nuclear receptor-mediated ecdysone signaling pathway","type":"exact"}],"termid":"GO:0035076"}


id: MONDO:0035790
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic anorectal malformation with rectal atresia (obsolete MONDO:0035790)","secondary_identifiers":["Orphanet:601018"],"termid":"MONDO:0035790","xrefs":{"Monarch":{"xref_id":"0035790"}}}


id: PBO:0005078
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"6.3.5.1","termid":"PBO:0005078"}


id: GO:0050658
data:
  {"annotated_genes":["SJAG_04115","SJAG_02274","SJAG_04202","SJAG_01584","SJAG_02209","SJAG_02704","SJAG_01185","SJAG_04310","SJAG_03283","SJAG_01529","SJAG_02757","SJAG_04083","SJAG_04622","SJAG_03847","SJAG_03593","SJAG_03693","SJAG_04017","SJAG_04721","SJAG_03986","SJAG_01374","SJAG_04472","SJAG_00375","SJAG_02425","SJAG_04347","SJAG_04656","SJAG_00093","SJAG_03729","SJAG_01065","SJAG_02661","SJAG_03300","SJAG_00178","SJAG_04645","SJAG_00641","SJAG_04589","SJAG_03002","SJAG_04379","SJAG_04536","SJAG_02534","SJAG_01715","SJAG_05328","SJAG_01013","SJAG_02520","SJAG_03470","SJAG_01652","SJAG_04360","SJAG_03299","SJAG_00992","SJAG_03156","SJAG_00471","SJAG_01083","SJAG_03358","SJAG_04480","SJAG_00298","SJAG_01467","SJAG_04148","SJAG_01449"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91495,103172,74666,119330,74750,78627,61928,63503,82134,76028,79454],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006406"},{"annotations":[75134],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031990"},{"annotations":[58930,65796,60367],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051028"},{"annotations":[76659,104666,76413,113804,76088,71846,75704,76319,117862,105959,113176,111905,79270,75133,98957,103883,73343,77630,118372,109668,120090,112477,98545,121009,94203,74980,103417,118114,116518,82357],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016973"},{"annotations":[82022,77534,96001,98140,77092,107091],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006405"},{"annotations":[104572],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006404"},{"annotations":[107775,107304,74107,80507],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006409"},{"annotations":[81092],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0016031"},{"annotations":[81488],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0071528"}]},"cv_name":"biological_process","definition":"The directed movement of RNA, ribonucleic acids, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nucleic acid transport","termid":"GO:0050657"},{"relation_name":"is_a","term_name":"establishment of RNA localization","termid":"GO:0051236"}],"gene_count":56,"genes_by_uniquename":{"SJAG_00093":null,"SJAG_00178":null,"SJAG_00298":null,"SJAG_00375":null,"SJAG_00471":null,"SJAG_00641":null,"SJAG_00992":null,"SJAG_01013":null,"SJAG_01065":null,"SJAG_01083":null,"SJAG_01185":null,"SJAG_01374":null,"SJAG_01449":null,"SJAG_01467":null,"SJAG_01529":null,"SJAG_01584":null,"SJAG_01652":null,"SJAG_01715":null,"SJAG_02209":null,"SJAG_02274":null,"SJAG_02425":null,"SJAG_02520":null,"SJAG_02534":null,"SJAG_02661":null,"SJAG_02704":null,"SJAG_02757":null,"SJAG_03002":null,"SJAG_03156":null,"SJAG_03283":null,"SJAG_03299":null,"SJAG_03300":null,"SJAG_03358":null,"SJAG_03470":null,"SJAG_03593":null,"SJAG_03693":null,"SJAG_03729":null,"SJAG_03847":null,"SJAG_03986":null,"SJAG_04017":null,"SJAG_04083":null,"SJAG_04115":null,"SJAG_04148":null,"SJAG_04202":null,"SJAG_04310":null,"SJAG_04347":null,"SJAG_04360":null,"SJAG_04379":null,"SJAG_04472":null,"SJAG_04480":null,"SJAG_04536":null,"SJAG_04589":null,"SJAG_04622":null,"SJAG_04645":null,"SJAG_04656":null,"SJAG_04721":null,"SJAG_05328":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810","GO:0051179"],"is_obsolete":false,"name":"RNA transport","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000104":null,"GO_REF:0000107":null},"termid":"GO:0050658","terms_by_termid":{"GO:0006404":null,"GO:0006405":null,"GO:0006406":null,"GO:0006409":null,"GO:0016031":null,"GO:0016973":null,"GO:0031990":null,"GO:0051028":null,"GO:0071528":null}}


id: PBO:0066871
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 171","termid":"PBO:0066871"}


id: MONDO:0025382
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Connective tissue tumors, affecting primarily fowl, that are usually caused by avian sarcoma viruses.","definition_xrefs":["MESH:D001357"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bird disease","termid":"MONDO:0024905"},{"relation_name":"is_a","term_name":"sarcoma, non-human animal","termid":"MONDO:0700131"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sarcoma, avian","synonyms":[{"name":"Avian sarcoma","type":"related"},{"name":"Avian sarcomas","type":"related"},{"name":"Rous sarcoma","type":"related"},{"name":"sarcoma, Rous","type":"related"},{"name":"sarcomas, Avian","type":"related"}],"termid":"MONDO:0025382","xrefs":{"Monarch":{"xref_id":"0025382"}}}


id: GO:0008758
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2O + UDP-2,3-bis(3-hydroxymyristoyl)glucosamine = 2,3-bis(3-hydroxymyristoyl)-beta-D-glucosaminyl 1-phosphate + UMP.","definition_xrefs":["MetaCyc:LIPIDXSYNTHESIS-RXN","PMID:12000770"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrophosphatase activity","termid":"GO:0016462"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0016787","GO:0003674"],"is_obsolete":false,"name":"UDP-2,3-diacylglucosamine hydrolase activity","secondary_identifiers":["RHEA:25213"],"termid":"GO:0008758"}


id: PR:O43060
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A eukaryotic translation initiation factor 3 subunit F that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03575","PANTHER:PTHR10540:SF6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"eukaryotic translation initiation factor 3 subunit F (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC4C3.07","secondary_identifiers":["UniProtKB:O43060"],"synonyms":[{"name":"Spom972h-EIF3F","type":"exact"},{"name":"eIF3f (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O43060"}


id: PBO:0027280
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_meiotic_recombination_at_M26_site","termid":"PBO:0027280"}


id: PBO:0079057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Val (anticodon CAC) 12-1","termid":"PBO:0079057"}


id: PBO:0069172
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 425, pseudogene","termid":"PBO:0069172"}


id: GO:0062127
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of primary fatty amides.","definition_xrefs":["PMID:11128635"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fatty acid primary amide metabolic process","termid":"GO:0062126"},{"relation_name":"is_a","term_name":"fatty acid derivative catabolic process","termid":"GO:1901569"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"fatty acid primary amide catabolic process","synonyms":[{"name":"primary fatty amide catabolic process","type":"exact"}],"termid":"GO:0062127"}


id: MONDO:0003110
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hemangioma arising from the skin.","definition_xrefs":["NCIT:C4905"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemangioma","termid":"MONDO:0006500"},{"relation_name":"is_a","term_name":"benign neoplasm of skin","termid":"MONDO:0021440"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"skin hemangioma","secondary_identifiers":["UMLS:C0687140","MEDGEN:151951","DOID:471","SCTID:93471006"],"synonyms":[{"name":"angioma of skin","type":"exact"},{"name":"angioma of the skin","type":"exact"},{"name":"angiomatous naevus of skin","type":"exact"},{"name":"hemangioma of skin","type":"exact"},{"name":"hemangioma of the skin","type":"exact"},{"name":"hemangioma of zone of skin","type":"exact"},{"name":"skin angioma","type":"exact"},{"name":"skin hemangioma","type":"exact"},{"name":"zone of skin hemangioma","type":"exact"}],"termid":"MONDO:0003110","xrefs":{"Monarch":{"xref_id":"0003110"}}}


id: PBO:0064412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PNMA family member 6E","termid":"PBO:0064412"}


id: GO:0102177
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 24-methylenelophenol + O2 + NADH + H+ = 4alpha-hydroxymethyl-ergosta-7,24(241)-dien-3beta-ol + NAD + H2O.","definition_xrefs":["GOC:pz","PMID:11707264","RHEA:58872"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"24-methylenelophenol methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11930","EC:1.14.18.11"],"termid":"GO:0102177"}


id: MONDO:1012099
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary autoimmune hemolytic anemia, non-human animal","termid":"MONDO:1011690"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"primary autoimmune hemolytic anemia, horse","secondary_identifiers":["OMIA:000434-9796"],"termid":"MONDO:1012099","xrefs":{"Monarch":{"xref_id":"1012099"}}}


id: MONDO:0003077
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma restricted to local involvement.","definition_xrefs":["NCIT:C7846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0005328","MONDO:0004992"],"is_obsolete":false,"name":"intraocular retinoblastoma","secondary_identifiers":["DOID:4653","MEDGEN:78874","UMLS:C0278717"],"synonyms":[{"name":"intraocular retinoblastoma","type":"exact"}],"termid":"MONDO:0003077","xrefs":{"Monarch":{"xref_id":"0003077"}}}


id: GO:0070590
data:
  {"annotated_genes":["SJAG_03587","SJAG_03013","SJAG_01321","SJAG_04236","SJAG_04483","SJAG_00974","SJAG_04868","SJAG_04238","SJAG_03057","SJAG_04184","SJAG_03483"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[96475],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034413"},{"annotations":[90709,92255,93784,90219],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0030476"},{"annotations":[74951],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0034412"},{"annotations":[119853,111113,106187,116140,119845],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0070591"}]},"cv_name":"biological_process","definition":"A cellular process that results in the biosynthesis of constituent macromolecules, assembly, and arrangement of constituent parts of a spore wall. A spore wall is the specialized cell wall lying outside the cell membrane of a spore.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell wall biogenesis","termid":"GO:0042546"},{"relation_name":"part_of","term_name":"sporulation resulting in formation of a cellular spore","termid":"GO:0030435"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00974":null,"SJAG_01321":null,"SJAG_03013":null,"SJAG_03057":null,"SJAG_03483":null,"SJAG_03587":null,"SJAG_04184":null,"SJAG_04236":null,"SJAG_04238":null,"SJAG_04483":null,"SJAG_04868":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0071554"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0071554","GO:0008150"],"is_obsolete":false,"name":"spore wall biogenesis","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"termid":"GO:0070590","terms_by_termid":{"GO:0030476":null,"GO:0034412":null,"GO:0034413":null,"GO:0070591":null}}


id: PBO:0080930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta pseudogene 8","termid":"PBO:0080930"}


id: GO:0007507
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the heart over time, from its formation to the mature structure. The heart is a hollow, muscular organ, which, by contracting rhythmically, keeps up the circulation of the blood.","definition_xrefs":["UBERON:0000948","GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ development","termid":"GO:0048513"},{"relation_name":"part_of","term_name":"circulatory system development","termid":"GO:0072359"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"heart development","secondary_identifiers":["GO:0007511","Wikipedia:Heart_development"],"synonyms":[{"name":"cardiac development","type":"related"},{"name":"dorsal vessel development","type":"narrow"}],"termid":"GO:0007507"}


id: PBO:0041168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BTG3 antisense RNA 1","termid":"PBO:0041168"}


id: PBO:0057892
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 3196","termid":"PBO:0057892"}


id: PR:Q9UTI5
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A vacuolar protein sorting-associated protein 29 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO01555","PRO:DNx","PANTHER:PTHR11124:SF3"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"vacuolar protein sorting-associated protein 29 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC15E1.06","secondary_identifiers":["UniProtKB:Q9UTI5"],"synonyms":[{"name":"Spom972h-VPS29","type":"exact"}],"termid":"PR:Q9UTI5"}


id: PBO:0042057
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"coiled-coil domain containing 120","termid":"PBO:0042057"}


id: PBO:0068471
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 48, pseudogene","termid":"PBO:0068471"}


id: PBO:0078311
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asp (GTC) 7-1","termid":"PBO:0078311"}


id: MONDO:0020403
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mitral valve agenesis is a rare congenital heart malformation defined as an agenesis or severe hypoplasia of both mitral valve leaflets (complete agenesis) or one of the leaflets (partial agenesis). Complete mitral valve agenesis presents in the neonatal period with symptoms of severe mitral regurgitation and is rapidly fatal unless surgically treated. It is frequently associated with other heart malformations. Partial mitral valve agenesis may present at various ages, usually with symptoms of mitral regurgitation.","definition_xrefs":["Orphanet:99062"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital mitral valve insufficiency and/or stenosis","termid":"MONDO:0019817"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital mitral valve agenesis","secondary_identifiers":["GARD:19629","MEDGEN:672659","UMLS:C0685721"],"termid":"MONDO:0020403","xrefs":{"Monarch":{"xref_id":"0020403"}}}


id: PBO:0119997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"STAM antisense RNA 2","termid":"PBO:0119997"}


id: MONDO:0001716
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"corneal argyrosis","secondary_identifiers":["ICD9:371.16","MEDGEN:509793","UMLS:C0155108","SCTID:21328003","DOID:13447","ICD10CM:H18.02"],"synonyms":[{"name":"argentous corneal deposits","type":"exact"},{"name":"argyrosis of cornea","type":"exact"}],"termid":"MONDO:0001716","xrefs":{"Monarch":{"xref_id":"0001716"}}}


id: GO:0005223
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a cation by a channel that opens when intracellular cGMP has been bound by the channel complex or one of its constituent parts.","definition_xrefs":["GOC:mtg_transport"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellularly cyclic nucleotide-activated monoatomic cation channel activity","termid":"GO:0005221"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0005215","GO:0022857","GO:0003674"],"is_obsolete":false,"name":"intracellularly cGMP-activated cation channel activity","synonyms":[{"name":"intracellular cGMP activated cation channel activity","type":"exact"},{"name":"intracellular cGMP-activated cation channel activity","type":"exact"}],"termid":"GO:0005223"}


id: GO:0051430
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a corticotropin-releasing hormone receptor 1 (CRHR1). CRHR1 is the major subtype in the pituitary corticotroph, and mediates the stimulatory actions of corticotropin-releasing hormone on corticotropin hormone secretion. CRHR1 are also located in cortical areas of the brain, cerebellum and limbic system.","definition_xrefs":["PMID:15134857"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corticotropin-releasing hormone receptor binding","termid":"GO:0051429"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"corticotropin-releasing hormone receptor 1 binding","secondary_identifiers":["GO:0031743"],"synonyms":[{"name":"CRHR1 binding","type":"exact"},{"name":"type 1 corticotropin releasing factor receptor binding","type":"exact"},{"name":"type 1 corticotropin releasing factor receptor ligand","type":"narrow"},{"name":"type 1 corticotropin-releasing factor receptor binding","type":"exact"}],"termid":"GO:0051430"}


id: GO:0050460
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: NH3 + NAD+ + H2O = hydroxylamine + NADH + H+.","definition_xrefs":["MetaCyc:HYDROXYLAMINE-REDUCTASE-NADH-RXN","EC:1.7.1.10"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on other nitrogenous compounds as donors, with NAD or NADP as acceptor","termid":"GO:0046857"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016491"],"is_obsolete":false,"name":"hydroxylamine reductase (NADH) activity","secondary_identifiers":["RHEA:20581"],"synonyms":[{"name":"N-hydroxy amine reductase activity","type":"related"},{"name":"NADH-hydroxylamine reductase activity","type":"related"},{"name":"NADH2:hydroxylamine oxidoreductase activity","type":"related"},{"name":"NADH:hydroxylamine oxidoreductase activity","type":"related"},{"name":"ammonium dehydrogenase activity","type":"related"},{"name":"ammonium:NAD+ oxidoreductase activity","type":"related"},{"name":"hydroxylamine reductase (NADH2)","type":"related"}],"termid":"GO:0050460"}


id: PBO:0017952
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anaphase-promoting complex substrate recognition subunit Apc10","termid":"PBO:0017952"}


id: PBO:0074922
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 91A","termid":"PBO:0074922"}


id: PBO:0039557
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ANKRD49 pseudogene 4","termid":"PBO:0039557"}


id: GO:2000776
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any histone H4 acetylation that is involved in a response to DNA damage stimulus.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete histone H4 acetylation involved in response to DNA damage stimulus (obsolete GO:2000776)","synonyms":[{"name":"histone H4 acetylation of DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular DNA damage response","type":"exact"},{"name":"histone H4 acetylation of cellular response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to DNA damage stimulus","type":"exact"},{"name":"histone H4 acetylation of response to genotoxic stress","type":"exact"}],"termid":"GO:2000776"}


id: FYPO:0007289
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of UDP-glucose 4-epimerase activity is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal catalytic activity","termid":"FYPO:0000661"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000707"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0001985","FYPO:0000661","FYPO:0000707","FYPO:0000654"],"is_obsolete":false,"name":"abnormal UDP-glucose 4-epimerase activity","termid":"FYPO:0007289"}


id: GO:0010374
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process whose specific outcome is the progression of the stomatal complex over time from its formation to the mature structure. The stomatal complex is the stomatal guard cells and their associated epidermal cells.","definition_xrefs":["PMID:17259259"],"direct_ancestors":[{"relation_name":"is_a","term_name":"post-embryonic development","termid":"GO:0009791"},{"relation_name":"is_a","term_name":"plant epidermis development","termid":"GO:0090558"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"stomatal complex development","termid":"GO:0010374"}


id: MONDO:0003596
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A morphologic variant of well differentiated liposarcoma characterized by the presence of bland spindle cells and lipoblasts within a myxoid or fibrous stroma.","definition_xrefs":["NCIT:C27489"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"atypical lipomatous tumor","termid":"MONDO:0006097"},{"relation_name":"is_a","term_name":"spindle cell sarcoma","termid":"MONDO:0002927"},{"relation_name":"is_a","term_name":"well-differentiated liposarcoma","termid":"MONDO:0005103"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"spindle cell liposarcoma","secondary_identifiers":["ICD9:171.9","UMLS:C1275275","DOID:5705","MEDGEN:266156","SCTID:404073009"],"synonyms":[{"name":"spindle cell liposarcoma","type":"exact"}],"termid":"MONDO:0003596","xrefs":{"Monarch":{"xref_id":"0003596"}}}


id: PBO:0090213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPOUT domain containing methyltransferase","termid":"PBO:0090213"}


id: PBO:0031049
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_histone_modification","termid":"PBO:0031049"}


id: MONDO:0044727
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare carcinoma with a poor prognosis, characterized by the presence of a mixture of exocrine and neuroendocrine malignant epithelial cells in both the pancreas and metastatic sites. Symptoms include jaundice, abdominal pain, and weight loss.","definition_xrefs":["NCIT:C45843"],"direct_ancestors":[{"relation_name":"is_a","term_name":"exocrine pancreatic carcinoma","termid":"MONDO:0005192"},{"relation_name":"is_a","term_name":"digestive system mixed adenoneuroendocrine carcinoma","termid":"MONDO:0006182"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0004992"],"is_obsolete":false,"name":"pancreatic carcinoma with mixed differentiation","secondary_identifiers":["Orphanet:506112","MEDGEN:353935","GARD:22057","UMLS:C1709050"],"synonyms":[{"name":"MiNEN of pancreas","type":"exact"},{"name":"mixed exocrine-endocrine carcinoma of the pancreas","type":"exact"},{"name":"mixed neuroendocrine-nonneuroendocrine neoplasm of pancreas","type":"related"},{"name":"pancreatic MiNEN","type":"exact"},{"name":"pancreatic carcinoma with mixed differentiation","type":"exact"},{"name":"pancreatic mixed neuroendocrine-nonneuroendocrine neoplasm","type":"exact"}],"termid":"MONDO:0044727","xrefs":{"Monarch":{"xref_id":"0044727"}}}


id: GO:0102036
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: a tetrahydrofolate + a [methyl-Co(III) corrinoid Fe-S protein] = an N5-methyl-tetrahydrofolate + a [Co(I) corrinoid Fe-S protein].","definition_xrefs":["EC:2.1.1.258","PMID:7928975","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"methyltransferase activity","termid":"GO:0008168"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016741"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016741","GO:0016740","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"methyltetrahydrofolate:corrinoid/iron-sulfur protein methyltransferase activity","secondary_identifiers":["RHEA:45200","MetaCyc:METHCOCLTH-RXN"],"termid":"GO:0102036"}


id: GO:2000616
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of histone H3-K9 acetylation.","definition_xrefs":["GOC:BHF"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of histone H3-K9 acetylation (obsolete GO:2000616)","synonyms":[{"name":"negative regulation of histone H3 acetylation at K9","type":"exact"},{"name":"negative regulation of histone H3K9 acetylation","type":"exact"}],"termid":"GO:2000616"}


id: GO:0098782
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transmembrane transfer of a potassium ion by a channel that opens in response to a mechanical stress.","definition_xrefs":["PMID:25471887","PMID:25500157","PMID:22282805"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium channel activity","termid":"GO:0005267"},{"relation_name":"is_a","term_name":"mechanosensitive monoatomic cation channel activity","termid":"GO:0140135"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0005215"}],"interesting_parent_ids":["GO:0005215","GO:0003674","GO:0022857"],"is_obsolete":false,"name":"mechanosensitive potassium channel activity","synonyms":[{"name":"mechanically-gated potassium channel activity","type":"exact"}],"termid":"GO:0098782"}


id: MOD:01407
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-cysteine residue and an L-phenylalanine residue to form L-phenylalanine thiazoline-4-carboxylic acid.","definition_xrefs":["PubMed:7592021","PubMed:8557573","RESID:AA0484"],"direct_ancestors":[{"relation_name":"is_a","term_name":"thiazole/thiazoline ring crosslinked residues","termid":"MOD:01420"},{"relation_name":"is_a","term_name":"crosslinked L-phenylalanine residue","termid":"MOD:02053"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-phenylalanine thiazoline-4-carboxylic acid","synonyms":[{"name":"(4R)-2-[(1S)-1-amino-2-phenylethyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"2-[1-azanyl-2-phenylethyl]-4,5-dihydro-1,3-thiazole-4-carboxylic acid","type":"exact"},{"name":"CROSSLNK Thiazoline-4-carboxylic acid (Phe-Cys)","type":"exact"},{"name":"L-phenylalanine thiazoline-4-carboxylic acid","type":"exact"}],"termid":"MOD:01407"}


id: GO:0002633
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of granuloma formation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of granuloma formation","termid":"GO:0002631"},{"relation_name":"is_a","term_name":"positive regulation of chronic inflammatory response","termid":"GO:0002678"},{"relation_name":"is_a","term_name":"positive regulation of immune effector process","termid":"GO:0002699"},{"relation_name":"positively_regulates","term_name":"granuloma formation","termid":"GO:0002432"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of granuloma formation","synonyms":[{"name":"activation of granuloma formation","type":"narrow"},{"name":"stimulation of granuloma formation","type":"narrow"},{"name":"up regulation of granuloma formation","type":"exact"},{"name":"up-regulation of granuloma formation","type":"exact"},{"name":"upregulation of granuloma formation","type":"exact"}],"termid":"GO:0002633"}


id: GO:1905123
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of glucosylceramidase activity.","definition_xrefs":["GOC:TermGenie","PMID:24334770","GOC:bf","GOC:PARL","GO_REF:0000059"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of glucosylceramidase activity (obsolete GO:1905123)","synonyms":[{"name":"regulation of D-glucosyl-N-acylsphingosine glucohydrolase activity","type":"exact"},{"name":"regulation of GCase activity","type":"exact"},{"name":"regulation of GlcCer-beta-glucosidase activity","type":"exact"},{"name":"regulation of acid beta-glucosidase activity","type":"exact"},{"name":"regulation of beta-D-glucocerebrosidase activity","type":"exact"},{"name":"regulation of beta-glucocerebrosidase activity","type":"exact"},{"name":"regulation of beta-glucosylceramidase activity","type":"exact"},{"name":"regulation of ceramide glucosidase activity","type":"exact"},{"name":"regulation of glucocerebrosidase activity","type":"exact"},{"name":"regulation of glucosphingosine glucosylhydrolase activity","type":"exact"},{"name":"regulation of glucosylcerebrosidase activity","type":"exact"},{"name":"regulation of glucosylsphingosine beta-D-glucosidase activity","type":"exact"},{"name":"regulation of glucosylsphingosine beta-glucosidase activity","type":"exact"},{"name":"regulation of psychosine hydrolase activity","type":"exact"}],"termid":"GO:1905123"}


id: MOD:00454
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively replaces a residue alpha-amino- or alpha-imino-hydrogen with a quaternary amine reagent heavy (+3amu) form group.","definition_xrefs":["PubMed:11857757","Unimod:61"],"direct_ancestors":[{"relation_name":"is_a","term_name":"isotope tagged reagent derivatized residue","termid":"MOD:01426"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"quaternary amine labeling reagent heavy form (+3amu) (N-term & K)","synonyms":[{"name":"GIST-Quat:2H(3)","type":"related"},{"name":"Quaternary amine labeling reagent heavy (+3amu) form, N-term & K","type":"related"}],"termid":"MOD:00454"}


id: PBO:0036454
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABC1 kinase family ubiquinone biosynthesis ATPase Abc1/Coq8","termid":"PBO:0036454"}


id: MONDO:0022687
data:
  {"annotated_genes":["SJAG_00686","SJAG_02084","SJAG_01317","SJAG_01945","SJAG_03393","SJAG_01400","SJAG_01356","SJAG_02457","SJAG_00933","SJAG_00645","SJAG_03720","SJAG_00421","SJAG_04641","SJAG_02196","SJAG_01168","SJAG_01286","SJAG_02680","SJAG_00087","SJAG_03692","SJAG_00526","SJAG_01179","SJAG_03923","SJAG_05212","SJAG_02377","SJAG_04233","SJAG_04418","SJAG_02242","SJAG_05332","SJAG_04622","SJAG_00380","SJAG_00863","SJAG_03862","SJAG_04822","SJAG_02885","SJAG_04533","SJAG_00059","SJAG_02119","SJAG_01438"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87864],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014744"},{"annotations":[87407],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014557"},{"annotations":[87383],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008840"},{"annotations":[88784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011397"},{"annotations":[88289],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012784"},{"annotations":[89035],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013392"},{"annotations":[88695],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014503"},{"annotations":[87142],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008943"},{"annotations":[87257],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014601"},{"annotations":[88437],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0044720"},{"annotations":[86981],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014104"},{"annotations":[88151],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013886"},{"annotations":[88773],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011402"},{"annotations":[87522],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0100340"},{"annotations":[89111],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0958231"},{"annotations":[87882],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0016163"},{"annotations":[87660],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011330"},{"annotations":[87225],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011439"},{"annotations":[87735],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011781"},{"annotations":[89275],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008458"},{"annotations":[87175,87176],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012246"},{"annotations":[87161],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0012450"},{"annotations":[87623,87622],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0007574"},{"annotations":[87815],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0013594"},{"annotations":[88271,88272],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014417"},{"annotations":[89162],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014934"},{"annotations":[87402],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0033115"},{"annotations":[87472],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0032923"},{"annotations":[88548],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030312"},{"annotations":[88308,88307],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030318"},{"annotations":[88314],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0030323"},{"annotations":[87580],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0011801"},{"annotations":[88598,88599],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0018996"},{"annotations":[87595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010547"},{"annotations":[87726],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0010524"}]},"cv_name":"mondo","definition":"Degeneration of the cerebellum. It may be an inherited condition, a paraneoplastic syndrome, or secondary to autoimmune disorders.","definition_xrefs":["NCIT:C84624"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebellar disorder","termid":"MONDO:0002427"},{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":38,"genes_by_uniquename":{"SJAG_00059":null,"SJAG_00087":null,"SJAG_00380":null,"SJAG_00421":null,"SJAG_00526":null,"SJAG_00645":null,"SJAG_00686":null,"SJAG_00863":null,"SJAG_00933":null,"SJAG_01168":null,"SJAG_01179":null,"SJAG_01286":null,"SJAG_01317":null,"SJAG_01356":null,"SJAG_01400":null,"SJAG_01438":null,"SJAG_01945":null,"SJAG_02084":null,"SJAG_02119":null,"SJAG_02196":null,"SJAG_02242":null,"SJAG_02377":null,"SJAG_02457":null,"SJAG_02680":null,"SJAG_02885":null,"SJAG_03393":null,"SJAG_03692":null,"SJAG_03720":null,"SJAG_03862":null,"SJAG_03923":null,"SJAG_04233":null,"SJAG_04418":null,"SJAG_04533":null,"SJAG_04622":null,"SJAG_04641":null,"SJAG_04822":null,"SJAG_05212":null,"SJAG_05332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"cerebellar degeneration","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:95646004","DOID:1443","MEDGEN:75496","ICD9:331.9","UMLS:C0262404","SCTID:418143002"],"synonyms":[{"name":"Brain degeneration","type":"exact"},{"name":"cerebellar Degeneration","type":"exact"},{"name":"cerebellar degeneration","type":"exact"},{"name":"cerebellum neurodegenerative disease","type":"exact"},{"name":"cerebral degeneration","type":"related"},{"name":"neurodegenerative disease of cerebellum","type":"exact"}],"termid":"MONDO:0022687","terms_by_termid":{"MONDO:0007574":null,"MONDO:0008458":null,"MONDO:0008840":null,"MONDO:0008943":null,"MONDO:0010524":null,"MONDO:0010547":null,"MONDO:0011330":null,"MONDO:0011397":null,"MONDO:0011402":null,"MONDO:0011439":null,"MONDO:0011781":null,"MONDO:0011801":null,"MONDO:0012246":null,"MONDO:0012450":null,"MONDO:0012784":null,"MONDO:0013392":null,"MONDO:0013594":null,"MONDO:0013886":null,"MONDO:0014104":null,"MONDO:0014417":null,"MONDO:0014503":null,"MONDO:0014557":null,"MONDO:0014601":null,"MONDO:0014744":null,"MONDO:0014934":null,"MONDO:0016163":null,"MONDO:0018996":null,"MONDO:0030312":null,"MONDO:0030318":null,"MONDO:0030323":null,"MONDO:0032923":null,"MONDO:0033115":null,"MONDO:0044720":null,"MONDO:0100340":null,"MONDO:0958231":null},"xrefs":{"Monarch":{"xref_id":"0022687"}}}


id: PBO:0049910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hexosaminidase subunit beta","termid":"PBO:0049910"}


id: PBO:0091288
data:
  {"annotation_feature_type":"gene","cv_name":"misc","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiosis specific splicing","termid":"PBO:0091288"}


id: PBO:0055492
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2926","termid":"PBO:0055492"}


id: MONDO:1012169
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lower motor neuron disease, non-human animal","termid":"MONDO:1011848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lower motor neuron disease, pig","secondary_identifiers":["OMIA:000662-9823"],"termid":"MONDO:1012169","xrefs":{"Monarch":{"xref_id":"1012169"}}}


id: GO:0047919
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: GDP-alpha-D-mannose + H2O + 2 NAD+ = GDP-D-mannuronate + 3 H+ + 2 NADH.","definition_xrefs":["RHEA:21728","EC:1.1.1.132"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor","termid":"GO:0016616"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"GDP-mannose 6-dehydrogenase activity","secondary_identifiers":["KEGG_REACTION:R00880","MetaCyc:GDP-MANNOSE-6-DEHYDROGENASE-RXN"],"synonyms":[{"name":"GDP mannose dehydrogenase activity","type":"related"},{"name":"GDP-D-mannose:NAD+ 6-oxidoreductase activity","type":"related"},{"name":"GDPmannose 6-dehydrogenase activity","type":"related"},{"name":"guanosine diphospho-D-mannose dehydrogenase activity","type":"related"},{"name":"guanosine diphosphomannose dehydrogenase activity","type":"related"}],"termid":"GO:0047919"}


id: PBO:0071524
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L34 pseudogene 27","termid":"PBO:0071524"}


id: PBO:0031166
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_glutamate_import_during_vegetative_growth","termid":"PBO:0031166"}


id: PBO:0002030
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"alpha SNAP (predicted)","termid":"PBO:0002030"}


id: PBO:0031542
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-unequal_homologous_chromosome_segregation","termid":"PBO:0031542"}


id: MONDO:0020587
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A coagulation disorder characterized by the partial or complete absence of factor XI activity in the blood.","definition_xrefs":["NCIT:C131739"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hemophilia","termid":"MONDO:0018660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"factor XI deficiency","secondary_identifiers":["SCTID:767713001","UMLS:C4321502","MEDGEN:1386956","MESH:D005173","NANDO:2200679"],"synonyms":[{"name":"factor XI deficiency","type":"exact"}],"termid":"MONDO:0020587","xrefs":{"Monarch":{"xref_id":"0020587"}}}


id: GO:0009451
data:
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id: PBO:0091329
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id: MONDO:0005051
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An infiltrating lobular adenocarcinoma of the breast. The malignant cells lack cohesion and are arranged individually or in a linear manner (Indian files), or as narrow trabeculae within the stroma. The malignant cells are usually smaller than those of ductal carcinoma, are less pleomorphic, and have fewer mitotic figures.","definition_xrefs":["NCIT:C7950"],"direct_ancestors":[{"relation_name":"is_a","term_name":"breast lobular carcinoma","termid":"MONDO:0000552"},{"relation_name":"is_a","term_name":"invasive breast carcinoma","termid":"MONDO:0006256"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"invasive lobular breast carcinoma","secondary_identifiers":["UMLS:C0279565","DOID:3457","MEDGEN:75994","ONCOTREE:ILC","EFO:0000553"],"synonyms":[{"name":"breast invasive lobular carcinoma","type":"related"},{"name":"classic invasive lobular carcinoma","type":"exact"},{"name":"infiltrating lobular adenocarcinoma","type":"exact"},{"name":"infiltrating lobular breast carcinoma","type":"exact"},{"name":"infiltrating lobular carcinoma of breast","type":"exact"},{"name":"infiltrating lobular carcinoma of the breast","type":"exact"},{"name":"invasive lobular adenocarcinoma","type":"exact"},{"name":"invasive lobular breast carcinoma","type":"exact"},{"name":"invasive lobular carcinoma","type":"exact"},{"name":"invasive lobular carcinoma of breast","type":"exact"},{"name":"invasive lobular carcinoma of the breast","type":"exact"},{"name":"invasive lobular carcinoma, classic type","type":"exact"},{"name":"lobular carcinoma","type":"broad"},{"name":"lobular carcinoma (morphologic abnormality)","type":"broad"},{"name":"lobular carcinoma NOS (morphologic abnormality)","type":"broad"},{"name":"lobular carcinoma of the breast","type":"broad"}],"termid":"MONDO:0005051","xrefs":{"Monarch":{"xref_id":"0005051"}}}


id: PBO:0053469
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  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 433","termid":"PBO:0053469"}


id: PBO:0005811
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id: RO:0002529
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id: GO:0033319
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id: FYPO:0002946
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id: PBO:0073822
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id: GO:0006390
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id: PBO:0076208
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id: PBO:0108973
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id: GO:0009673
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id: GO:0033504
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id: PBO:0040167
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id: MONDO:0003905
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id: FYPO:0002583
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id: PBO:0029349
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id: MONDO:0004725
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A in situ carcinoma that involves the rectum.","definition_xrefs":["MONDO:patterns/location"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intestine carcinoma in situ","termid":"MONDO:0004698"},{"relation_name":"is_a","term_name":"rectal carcinoma","termid":"MONDO:0044937"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0004335"],"is_obsolete":false,"name":"rectum carcinoma in situ","secondary_identifiers":["NCIT:C4853","DOID:9174","ICD9:230.4","SCTID:308879003","ICD10CM:D01.2","MEDGEN:56335","UMLS:C0154062"],"synonyms":[{"name":"carcinoma in situ of rectum","type":"exact"},{"name":"carcinoma in situ of the rectum","type":"exact"},{"name":"marked dysplasia of rectum","type":"exact"},{"name":"marked dysplasia of the rectum","type":"exact"},{"name":"marked rectal dysplasia","type":"exact"},{"name":"rectal carcinoma in situ","type":"exact"},{"name":"rectum in situ carcinoma","type":"exact"},{"name":"severe dysplasia of rectum","type":"exact"},{"name":"severe dysplasia of the rectum","type":"exact"},{"name":"severe rectal dysplasia","type":"exact"},{"name":"stage 0 carcinoma of rectum","type":"exact"},{"name":"stage 0 carcinoma of the rectum","type":"exact"},{"name":"stage 0 rectal cancer","type":"exact"},{"name":"stage 0 rectal cancer aJCC v6","type":"exact"},{"name":"stage 0 rectal cancer aJCC v6 and v7","type":"exact"},{"name":"stage 0 rectal cancer aJCC v7","type":"exact"},{"name":"stage 0 rectal carcinoma","type":"exact"},{"name":"stage 0 rectum carcinoma","type":"exact"}],"termid":"MONDO:0004725","xrefs":{"Monarch":{"xref_id":"0004725"}}}


