# terms

id: GO:1901342
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of vasculature development.","definition_xrefs":["GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of multicellular organismal development","termid":"GO:2000026"},{"relation_name":"regulates","term_name":"vasculature development","termid":"GO:0001944"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of vasculature development","synonyms":[{"name":"regulation of vascular system development","type":"related"}],"termid":"GO:1901342"}


id: MONDO:0016828
data:
  {"annotated_genes":["SJAG_04984","SJAG_01417"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0008785"},{"annotations":[87776],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"MONDO:0014804"}]},"cv_name":"mondo","definition":"Congenital autosomal recessive sideroblastic anemia (ARSA) is a non-syndromic, microcytic/hypochromic sideroblastic anemia, present from early infancy and characterized by severe microcytic anemia, which is not pyridoxine responsive, and increased serum ferritin.","definition_xrefs":["Orphanet:260305"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal recessive disease","termid":"MONDO:0006025"},{"relation_name":"is_a","term_name":"inherited sideroblastic anemia","termid":"MONDO:0020099"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01417":null,"SJAG_04984":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002280"},{"rel_name":"is_a","termid":"MONDO:0006025"},{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570","MONDO:0002280","MONDO:0006025"],"is_obsolete":false,"name":"autosomal recessive sideroblastic anemia","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["SCTID:717050005","UMLS:C4274077","GARD:17240","MEDGEN:895586"],"synonyms":[{"name":"ARSA","type":"exact"},{"name":"congenital sideroblastic anaemia","type":"broad"},{"name":"congenital sideroblastic anemia","type":"broad"},{"name":"sideroblastic anemia, autosomal recessive","type":"exact"}],"termid":"MONDO:0016828","terms_by_termid":{"MONDO:0008785":null,"MONDO:0014804":null},"xrefs":{"Monarch":{"xref_id":"0016828"}}}


id: PBO:0044661
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"defective in cullin neddylation 1 domain containing 3","termid":"PBO:0044661"}


id: PBO:0073989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 25 member 1 pseudogene 3","termid":"PBO:0073989"}


id: PBO:0029871
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_histone_H3-K4_methylation","termid":"PBO:0029871"}


id: PBO:0075604
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2","termid":"PBO:0075604"}


id: PBO:0044042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chondroitin sulfate proteoglycan 5","termid":"PBO:0044042"}


id: PR:Q10136
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ste7 gene.","definition_xrefs":["UniProtKB:Q10136","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein ste7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC23E2.03c","synonyms":[{"name":"Spom972h-ste7","type":"exact"}],"termid":"PR:Q10136"}


id: PBO:0061412
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuronal pentraxin receptor","termid":"PBO:0061412"}


id: MOD:00259
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively crosslinks an L-tyrosine residue and the 5'-end of DNA through a phosphodiester bond to form O4'-(phospho-5'-DNA)-L-tyrosine.","definition_xrefs":["PubMed:3684578","PubMed:2940511","PubMed:1861973","RESID:AA0254"],"direct_ancestors":[{"relation_name":"is_a","term_name":"deoxyribonucleic acid linked residue","termid":"MOD:00750"},{"relation_name":"is_a","term_name":"modified L-tyrosine residue","termid":"MOD:00919"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"O4'-(phospho-5'-DNA)-L-tyrosine","synonyms":[{"name":"(S)-2-amino-3-[4-(5'-deoxyribonucleic acid phosphonoxy)phenyl]propanoic acid","type":"exact"},{"name":"ACT_SITE O-(5'-phospho-DNA)-tyrosine intermediate","type":"exact"},{"name":"MOD_RES O-(5'-phospho-DNA)-tyrosine","type":"exact"},{"name":"O4'-(phospho-5'-DNA)-L-tyrosine","type":"exact"},{"name":"O4'-L-tyrosine 5'-DNA phosphodiester","type":"exact"}],"termid":"MOD:00259"}


id: MONDO:0003514
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant form of teratoma.","definition_xrefs":["MONDO:patterns/malignant"],"direct_ancestors":[{"relation_name":"is_a","term_name":"teratoma","termid":"MONDO:0002601"},{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"malignant teratoma","secondary_identifiers":["NCIT:C4286","MEDGEN:1652407","DOID:5563","NCIT:C4287","NCIT:C8884","UMLS:C4722083"],"synonyms":[{"name":"malignant extragonadal teratoma","type":"narrow"},{"name":"teratoma, malignant","type":"exact"}],"termid":"MONDO:0003514","xrefs":{"Monarch":{"xref_id":"0003514"}}}


id: PBO:0083371
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; overlaps verified ORF YCL005W-A; mutations in YCL007C were thought to confer sensitivity to calcofluor white, but this phenotype was later shown to be due to the defect in YCL005W-A","termid":"PBO:0083371"}


id: MONDO:0009202
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary lethal multiple congenital anomalies/dysmorphic syndrome","termid":"MONDO:0043009"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Thakker-Donnai syndrome","secondary_identifiers":["GARD:5158","MEDGEN:346465","OMIM:227255","MESH:C536503","Orphanet:1780","UMLS:C1856892"],"synonyms":[{"name":"Dysmorphism multiple structural anomalies","type":"related"},{"name":"Dysmorphism-multiple structural anomalies syndrome","type":"exact"},{"name":"dysmorphic facial features and multiple structural abnormalities","type":"related"},{"name":"facial dysmorphism with multiple malformations","type":"related"}],"termid":"MONDO:0009202","xrefs":{"Monarch":{"xref_id":"0009202"}}}


id: GO:0015518
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: arabinose(out) + H+(out) = arabinose(in) + H+(in).","definition_xrefs":["TC:2.A.1.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carbohydrate:proton symporter activity","termid":"GO:0005351"},{"relation_name":"is_a","term_name":"arabinose transmembrane transporter activity","termid":"GO:0042900"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"arabinose:proton symporter activity","secondary_identifiers":["GO:0015523"],"synonyms":[{"name":"arabinose efflux permease activity","type":"broad"},{"name":"arabinose efflux transmembrane transporter activity","type":"broad"},{"name":"arabinose:hydrogen symporter activity","type":"exact"}],"termid":"GO:0015518"}


id: GO:0051089
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The proteolytic cleavage of transmembrane proteins and release of their ectodomain that occurs constantly, regardless of environmental conditions or demands.","definition_xrefs":["PMID:12714508"],"direct_ancestors":[{"relation_name":"is_a","term_name":"membrane protein ectodomain proteolysis","termid":"GO:0006509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"constitutive protein ectodomain proteolysis","termid":"GO:0051089"}


id: PBO:0062002
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 2 subfamily H member 1","termid":"PBO:0062002"}


id: PR:Q9UTE9
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A mitochondrial import inner membrane translocase subunit Tim10 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","PANTHER:PTHR11038:SF8"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial import inner membrane translocase subunit tim10 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC222.03c","secondary_identifiers":["UniProtKB:Q9UTE9"],"synonyms":[{"name":"SPAC222.03c","type":"related"},{"name":"Spom972h-TIMM10","type":"exact"}],"termid":"PR:Q9UTE9"}


id: PBO:0002602
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyridoxamine 5'-phosphate oxidase (predicted)","termid":"PBO:0002602"}


id: MONDO:0001687
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"diabetic cataract","secondary_identifiers":["DOID:13328","MEDGEN:507634","SCTID:43959009","ICD9:366.41","UMLS:C0011876","icd11.foundation:340836242"],"synonyms":[{"name":"cataract - diabetic","type":"exact"}],"termid":"MONDO:0001687","xrefs":{"Monarch":{"xref_id":"0001687"}}}


id: GO:0098025
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Multiprotein component at the distal (head) end of the virus tail to which fibers of tailed viruses may be attached.","definition_xrefs":["VZ:3957","GOC:bm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"virion component","termid":"GO:0044423"},{"relation_name":"part_of","term_name":"virus tail","termid":"GO:0098015"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"virus tail, baseplate","synonyms":[{"name":"bacteriophage baseplate","type":"narrow"},{"name":"tail structure","type":"related"},{"name":"tail tip","type":"related"}],"termid":"GO:0098025"}


id: FYECO:0000463
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"The assay, or growth of cells, was conducted in the presence of light.","definition_xrefs":["PomBase:pc"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"presence of light","termid":"FYECO:0000463"}


id: FYPO:0004958
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of RNA measured in the mitochondrion differs from normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"altered RNA level during vegetative growth","termid":"FYPO:0001326"},{"relation_name":"is_a","term_name":"altered level of substance in mitochondrion","termid":"FYPO:0004957"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0005447","FYPO:0001985","FYPO:0006551","FYPO:0000002","FYPO:0001320"],"is_obsolete":false,"name":"altered RNA level in mitochondrion","synonyms":[{"name":"abnormal RNA level in mitochondrion","type":"exact"},{"name":"abnormal RNA level in mitochondrion during vegetative growth","type":"exact"},{"name":"abnormal mitochondrial RNA level","type":"exact"},{"name":"abnormal mitochondrial RNA level during vegetative growth","type":"exact"},{"name":"altered RNA level in mitochondrion during mitotic cell cycle","type":"related"},{"name":"altered mitochondrial RNA level","type":"exact"},{"name":"altered transcript level in mitochondrion","type":"exact"}],"termid":"FYPO:0004958"}


id: MONDO:0003476
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An ependymoma, often supratentorial in location, characterized by the presence of ependymal cells with a perinuclear halo.","definition_xrefs":["NCIT:C4714"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete benign ependymoma (obsolete MONDO:0003161)","termid":"MONDO:0003161"},{"relation_name":"is_a","term_name":"ependymoma","termid":"MONDO:0016698"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"clear cell ependymoma","secondary_identifiers":["MEDGEN:1852795","UMLS:C5848299","DOID:5507","ONCOTREE:CCE"],"synonyms":[{"name":"clear cell ependymoma","type":"exact"}],"termid":"MONDO:0003476","xrefs":{"Monarch":{"xref_id":"0003476"}}}


id: PBO:0047081
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 135 member B","termid":"PBO:0047081"}


id: GO:0097151
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of inhibitory postsynaptic potential (IPSP). IPSP is a temporary decrease in postsynaptic membrane potential due to the flow of negatively charged ions into the postsynaptic cell. The flow of ions that causes an IPSP is an inhibitory postsynaptic current (IPSC) and makes it more difficult for the neuron to fire an action potential.","definition_xrefs":["PMID:18550748","GOC:sjp","GOC:BHF"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nervous system process","termid":"GO:0031646"},{"relation_name":"is_a","term_name":"modulation of inhibitory postsynaptic potential","termid":"GO:0098828"},{"relation_name":"positively_regulates","term_name":"inhibitory postsynaptic potential","termid":"GO:0060080"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"positive regulation of inhibitory postsynaptic potential","synonyms":[{"name":"positive regulation of IPSP","type":"exact"},{"name":"positive regulation of inhibitory post-synaptic membrane potential","type":"exact"}],"termid":"GO:0097151"}


id: PBO:0046446
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongin BC and polycomb repressive complex 2 associated protein","termid":"PBO:0046446"}


id: PBO:0045319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"double C2 domain beta","termid":"PBO:0045319"}


id: GO:1901730
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of monensin A.","definition_xrefs":["GOC:yaf","GOC:TermGenie","UniPathway:UPA00178"],"direct_ancestors":[{"relation_name":"is_a","term_name":"alcohol biosynthetic process","termid":"GO:0046165"},{"relation_name":"is_a","term_name":"carboxylic acid biosynthetic process","termid":"GO:0046394"},{"relation_name":"is_a","term_name":"monensin A metabolic process","termid":"GO:1901728"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"monensin A biosynthetic process","synonyms":[{"name":"monensin A anabolism","type":"exact"},{"name":"monensin A biosynthesis","type":"exact"},{"name":"monensin A formation","type":"exact"},{"name":"monensin A synthesis","type":"exact"},{"name":"monensin anabolism","type":"exact"},{"name":"monensin biosynthesis","type":"exact"},{"name":"monensin formation","type":"exact"},{"name":"monensin synthesis","type":"exact"}],"termid":"GO:1901730"}


id: MONDO:0004706
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"noninfectious dermatoses of eyelid","termid":"MONDO:0002137"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"discoid lupus erythematosus of eyelid","secondary_identifiers":["UMLS:C0155180","icd11.foundation:743513349","MEDGEN:509835","DOID:9076","ICD9:373.34","ICD10CM:H01.12","SCTID:79291003"],"termid":"MONDO:0004706","xrefs":{"Monarch":{"xref_id":"0004706"}}}


id: PBO:0050240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"high mobility group nucleosomal binding domain 2 pseudogene 18","termid":"PBO:0050240"}


id: PBO:0046969
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"family with sequence similarity 83 member F","termid":"PBO:0046969"}


id: FYPO:0000792
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which the observed rate of glycerol dehydrogenase activity is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal catalytic activity","termid":"FYPO:0000660"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0000654"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000652","FYPO:0000257","FYPO:0000654"],"is_obsolete":false,"name":"normal glycerol dehydrogenase activity","termid":"FYPO:0000792"}


id: GO:0046701
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of insecticides, chemicals used to kill insects.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"toxin catabolic process","termid":"GO:0009407"},{"relation_name":"is_a","term_name":"insecticide metabolic process","termid":"GO:0017143"},{"relation_name":"is_a","term_name":"xenobiotic catabolic process","termid":"GO:0042178"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0019748"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0098754"}],"interesting_parent_ids":["GO:0098754","GO:0008150","GO:0019748"],"is_obsolete":false,"name":"insecticide catabolic process","synonyms":[{"name":"insecticide breakdown","type":"exact"},{"name":"insecticide catabolism","type":"exact"},{"name":"insecticide degradation","type":"exact"}],"termid":"GO:0046701"}


id: MONDO:0005075
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A differentiated adenocarcinoma arising from the follicular cells of the thyroid gland. Radiation exposure is a risk factor and it is the most common malignant thyroid lesion, comprising 75% to 80% of all thyroid cancers in iodine sufficient countries. Diagnostic procedures include thyroid ultrasound and fine needle biopsy. Microscopically, the diagnosis is based on the distinct characteristics of the malignant cells, which include enlargement, oval shape, elongation, and overlapping of the nuclei. The nuclei also display clearing or have a ground glass appearance.","definition_xrefs":["NCIT:C4035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"papillary adenocarcinoma","termid":"MONDO:0002512"},{"relation_name":"is_a","term_name":"differentiated thyroid carcinoma","termid":"MONDO:0015447"},{"relation_name":"is_a","term_name":"thyroid gland adenocarcinoma","termid":"MONDO:0024622"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"thyroid gland papillary carcinoma","secondary_identifiers":["ONCOTREE:THPA","HP:0002895","EFO:0000641","MEDGEN:66773","UMLS:C0238463","SCTID:255029007","DOID:3969"],"synonyms":[{"name":"papillary cancer of the thyroid","type":"exact"},{"name":"papillary cancer of the thyroid gland","type":"exact"},{"name":"papillary cancer of thyroid","type":"exact"},{"name":"papillary cancer of thyroid gland","type":"exact"},{"name":"papillary carcinoma of the thyroid","type":"exact"},{"name":"papillary carcinoma of the thyroid gland","type":"exact"},{"name":"papillary carcinoma of thyroid","type":"exact"},{"name":"papillary carcinoma of thyroid gland","type":"exact"},{"name":"papillary thyroid cancer","type":"exact"},{"name":"papillary thyroid carcinoma","type":"exact"},{"name":"papillary thyroid gland carcinoma","type":"exact"},{"name":"thyroid gland papillary cancer","type":"exact"},{"name":"thyroid gland papillary carcinoma","type":"exact"},{"name":"thyroid papillary carcinoma","type":"exact"}],"termid":"MONDO:0005075","xrefs":{"Monarch":{"xref_id":"0005075"}}}


id: FYECO:0000315
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"gene","cv_annotations":{"fission_yeast_phenotype_condition":[{"annotations":[121546],"is_not":false,"summary":null,"term":"FYECO:0000315"}]},"cv_name":"fission_yeast_phenotype_condition","definition":"Cells or samples were exposed to ultraviolet light.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping experimental environment","termid":"FYECO:0000132"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"is_obsolete":false,"name":"UV","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"synonyms":[{"name":"UV irradiation","type":"exact"},{"name":"ultraviolet light","type":"exact"}],"termid":"FYECO:0000315","terms_by_termid":{"FYECO:0000315":null}}


id: GO:0050800
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the hydrolysis of GTP to directly drive the cellular or subcellular transport of a substance.","definition_xrefs":["GOC:ai","EC:3.6.5.-"],"gene_count":0,"genotype_count":0,"name":"obsolete hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement (obsolete GO:0050800)","synonyms":[{"name":"hydrolase activity, acting on acid anhydrides, acting on GTP, involved in cellular and subcellular movement","type":"exact"}],"termid":"GO:0050800"}


id: GO:0170054
data:
  {"annotated_genes":["SJAG_04682","SJAG_00686","SJAG_05212"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[106947,91711],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0044692"},{"annotations":[79777],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061632"}]},"cv_name":"molecular_function","definition":"Binds to and increases the activity of a ribonuclease.","definition_xrefs":["PMID:24736845"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nuclease activator activity","termid":"GO:0170053"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00686":null,"SJAG_04682":null,"SJAG_05212":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0098772"},{"rel_name":"is_a","termid":"GO:0140677"},{"rel_name":"is_a","termid":"GO:0030234"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0098772","GO:0140677","GO:0003674","GO:0030234"],"is_obsolete":false,"name":"ribonuclease activator activity","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"RNA nuclease activator activity","type":"exact"}],"termid":"GO:0170054","terms_by_termid":{"GO:0044692":null,"GO:0061632":null}}


id: PBO:0031530
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-decreased_oxidoreductase_activity","termid":"PBO:0031530"}


id: MONDO:0005472
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete congenital heart malformation (obsolete MONDO:0005472)","termid":"MONDO:0005472","xrefs":{"Monarch":{"xref_id":"0005472"}}}


id: SO:0000343
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence, aligned to another sequence with some statistical significance, using an algorithm such as BLAST or SIM4.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"is_a","term_name":"experimental_feature","termid":"SO:0001410"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"match","termid":"SO:0000343"}


id: GO:0070308
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the developmental fate of a cell becomes restricted such that it will develop into a lens fiber cell. A lens fiber cell is any of the elongated, tightly packed cells that make up the bulk of the mature lens in a camera-type eye.","definition_xrefs":["GOC:mah","PMID:7693735"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate commitment","termid":"GO:0045165"},{"relation_name":"part_of","term_name":"lens fiber cell differentiation","termid":"GO:0070306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lens fiber cell fate commitment","synonyms":[{"name":"lens fibre cell fate commitment","type":"exact"}],"termid":"GO:0070308"}


id: PBO:0058623
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 6755","termid":"PBO:0058623"}


id: RO:0002134
data:
  {"annotation_feature_type":"gene","cv_name":"relationship","definition":"Relation between a 'neuron projection bundle' and a region in which one or more of its component neuron projections either synapses to targets or receives synaptic input.\\nT innervates some R\\nExpands_to: T has_fasciculating_neuron_projection that synapse_in some R.","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"innervates","termid":"RO:0002134"}


id: FYPO:0005383
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype in which the duration of the first meiotic nuclear division is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal meiosis I","termid":"FYPO:0003563"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal duration of meiosis I","synonyms":[{"name":"normal duration of first meiotic nuclear division","type":"exact"}],"termid":"FYPO:0005383"}


id: MONDO:0100296
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Olmsted syndrome in which the cause of the disease is a variation in the TRPV3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Olmsted syndrome","termid":"MONDO:0031421"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093"],"is_obsolete":false,"name":"Olmsted syndrome 1","secondary_identifiers":["DOID:0112013","MEDGEN:1778121","OMIM:614594","UMLS:C5542829","GARD:15818"],"synonyms":[{"name":"Olmsted syndrome","type":"broad"},{"name":"palmoplantar keratoderma, mutilating, with periorificial keratotic plaques 1","type":"exact"}],"termid":"MONDO:0100296","xrefs":{"Monarch":{"xref_id":"0100296"}}}


id: PBO:0062500
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 8 subfamily F member 1 pseudogene","termid":"PBO:0062500"}


id: SO:0000832
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of sequence which is part of a promoter.","definition_xrefs":["SO:ke"],"gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000832 promoter_region (obsolete SO:0000832)","termid":"SO:0000832"}


id: GO:0061319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires the specialized structural and/or functional features of a nephrocyte. A nephrocyte is an insect renal cell that filters hemolymph. Differentiation includes the processes involved in commitment of a cell to a specific fate and its subsequent development to the mature state.","definition_xrefs":["CL:0002520","GOC:mtg_kidney_jan10","PMID:19783135","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"renal filtration cell differentiation","termid":"GO:0061318"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"nephrocyte differentiation","termid":"GO:0061319"}


id: MONDO:0010192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A subtype of Waardenburg syndrome type 4 (Waardenburg-Shah syndrome) caused by mutations in EDNRB.","direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg-Shah syndrome","termid":"MONDO:0019518"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426","MONDO:0004335"],"is_obsolete":false,"name":"Waardenburg syndrome type 4A","secondary_identifiers":["DOID:0110953","GARD:15245","OMIM:277580","MEDGEN:341244","UMLS:C1848519"],"synonyms":[{"name":"EDNRB Waardenburg syndrome","type":"exact"},{"name":"Shah-Waardenburg syndrome","type":"related"},{"name":"WS4A","type":"exact"},{"name":"Waardenburg syndrome caused by mutation in EDNRB","type":"exact"},{"name":"Waardenburg syndrome type 4A","type":"exact"},{"name":"Waardenburg syndrome type IVA","type":"exact"},{"name":"Waardenburg syndrome with Hirschsprung disease type 4A","type":"exact"},{"name":"Waardenburg syndrome with Hirschsprung disease, type 4A","type":"related"},{"name":"Waardenburg syndrome, type 4A","type":"related"},{"name":"Waardenburg-Shah syndrome","type":"related"},{"name":"Ws4","type":"related"}],"termid":"MONDO:0010192","xrefs":{"Monarch":{"xref_id":"0010192"}}}


id: GO:0140439
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the transfer of a stearoyl (systematic name, octadecanoyl) group to a sulfur atom on the cysteine of a protein molecule, in the reaction: octadecanoyl-CoA + L-cysteinyl-[protein] = CoA + S-octadecanoyl-L-cysteinyl-[protein].","definition_xrefs":["PMID:12681491","PMID:22247542","RHEA:59740","PMID:22968831"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-cysteine S-acyltransferase activity","termid":"GO:0019707"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0140096"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0003824","GO:0140096","GO:0016746","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"protein-cysteine S-stearoyltransferase activity","termid":"GO:0140439"}


id: PBO:0041329
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromosome 2 open reading frame 83","termid":"PBO:0041329"}


id: PBO:0081132
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ZFP3 divergent transcript","termid":"PBO:0081132"}


id: MONDO:0020126
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare peripheral neuropathy.","gene_count":0,"genotype_count":0,"name":"obsolete rare peripheral neuropathy (obsolete MONDO:0020126)","secondary_identifiers":["Orphanet:98496"],"synonyms":[{"name":"rare peripheral neuropathy","type":"exact"}],"termid":"MONDO:0020126","xrefs":{"Monarch":{"xref_id":"0020126"}}}


id: MONDO:0003484
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete penis squamous cell carcinoma (obsolete MONDO:0003484)","termid":"MONDO:0003484","xrefs":{"Monarch":{"xref_id":"0003484"}}}


id: MONDO:0035451
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete left sided atrial isomerism (obsolete MONDO:0035451)","secondary_identifiers":["Orphanet:566862"],"termid":"MONDO:0035451","xrefs":{"Monarch":{"xref_id":"0035451"}}}


id: GO:1901941
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving (+)-epi-alpha-bisabolol.","definition_xrefs":["GOC:TermGenie","PMID:22867794"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sesquiterpenoid metabolic process","termid":"GO:0006714"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"(+)-epi-alpha-bisabolol metabolic process","synonyms":[{"name":"(+)-epi-alpha-bisabolol metabolism","type":"exact"}],"termid":"GO:1901941"}


id: FYPO:0000880
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the trimethylation of lysine at position 9 of histone H3 in centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone H3-K9 trimethylation at centromere during vegetative growth","termid":"FYPO:0000864"},{"relation_name":"is_a","term_name":"increased histone H3-K9 trimethylation during vegetative growth","termid":"FYPO:0000879"},{"relation_name":"is_a","term_name":"abnormal histone methylation at centromere during vegetative growth","termid":"FYPO:0007374"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0000002","FYPO:0002494","FYPO:0002274"],"is_obsolete":false,"name":"increased histone H3-K9 trimethylation at centromere during vegetative growth","synonyms":[{"name":"increased centromeric histone H3-K9 trimethylation during vegetative growth","type":"exact"},{"name":"increased histone H3 K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3-K9 trimethylation at centromere during mitotic cell cycle","type":"related"},{"name":"increased histone H3K9 trimethylation at centromere during vegetative growth","type":"exact"},{"name":"increased histone H3K9me3 at centromere during vegetative growth","type":"exact"},{"name":"increased histone lysine H3 K9 trimethylation at centromere during vegetative growth","type":"exact"}],"termid":"FYPO:0000880"}


id: MONDO:0018717
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"lymphangioma","termid":"MONDO:0002013"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"mixed cystic lymphatic malformation","secondary_identifiers":["UMLS:C5680000","MEDGEN:1805965","Orphanet:458792","GARD:21912"],"synonyms":[{"name":"mixed cystic lymphangioma","type":"exact"}],"termid":"MONDO:0018717","xrefs":{"Monarch":{"xref_id":"0018717"}}}


id: PBO:0042251
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"copper chaperone for superoxide dismutase","termid":"PBO:0042251"}


id: PBO:0040799
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"basic helix-loop-helix family member e22","termid":"PBO:0040799"}


id: PBO:0016930
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ThiJ domain protein (predicted)","termid":"PBO:0016930"}


id: PBO:0073619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sialic acid binding Ig like lectin 5","termid":"PBO:0073619"}


id: MONDO:1012980
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Mucolipidosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lysosomal storage disease, non-human animal","termid":"MONDO:1010171"},{"relation_name":"is_a","term_name":"developmental defect during embryogenesis, non-human animal","termid":"MONDO:1011310"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mucolipidosis, non-human animal","termid":"MONDO:1012980","xrefs":{"Monarch":{"xref_id":"1012980"}}}


id: GO:1903754
data:
  {"annotated_genes":["SJAG_00113","SJAG_00851","SJAG_00140"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[97214,99581,105756],"is_not":false,"summary":null,"term":"GO:1903754"}]},"cv_name":"cellular_component","definition":"The plus-end of a cortical microtubule.","definition_xrefs":["GOC:TermGenie","GOC:vw","GO_REF:0000064"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cytoplasmic microtubule plus-end","termid":"GO:1904511"},{"relation_name":"part_of","term_name":"cortical microtubule","termid":"GO:0055028"}],"gene_count":3,"genes_by_uniquename":{"SJAG_00113":null,"SJAG_00140":null,"SJAG_00851":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0005938"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0015630","GO:0005737","GO:0005938","GO:0005575"],"is_obsolete":false,"name":"cortical microtubule plus-end","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"cortical microtubule plus end","type":"exact"}],"termid":"GO:1903754","terms_by_termid":{"GO:1903754":null}}


id: MONDO:1010784
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pyoderma that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyoderma, non-human animal","termid":"MONDO:1010142"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyoderma, dog","secondary_identifiers":["OMIA:001877-9615"],"termid":"MONDO:1010784","xrefs":{"Monarch":{"xref_id":"1010784"}}}


id: PBO:0088293
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Clathrin adaptor End4","termid":"PBO:0088293"}


id: PBO:0054469
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1868","termid":"PBO:0054469"}


id: PATO:0001122
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001122 absolute power value (obsolete PATO:0001122)","termid":"PATO:0001122"}


id: MONDO:0009681
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"Ullrich congenital muscular dystrophy","termid":"MONDO:0000355"},{"relation_name":"is_a","term_name":"collagen 6-related myopathy","termid":"MONDO:0100225"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0002320"],"is_obsolete":false,"name":"Ullrich congenital muscular dystrophy 1A","secondary_identifiers":["OMIM:254090","NANDO:1200215","UMLS:C0410179","DOID:0060946","MEDGEN:98046"],"synonyms":[{"name":"UCMD1","type":"related"},{"name":"Ullrich Scleroatonic muscular dystrophy","type":"related"},{"name":"Ullrich congenital muscular dystrophy","type":"related"},{"name":"Ullrich congenital muscular dystrophy 1","type":"exact"},{"name":"Ullrich congenital muscular dystrophy type 1","type":"broad"},{"name":"Ullrich disease","type":"related"},{"name":"muscular dystrophy, Scleroatonic","type":"related"}],"termid":"MONDO:0009681","xrefs":{"Monarch":{"xref_id":"0009681"}}}


id: PBO:0042358
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CD101 molecule","termid":"PBO:0042358"}


id: MONDO:0009948
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An autosomal recessive inherited severe hemolytic anemia. It is a subtype of hereditary elliptocytosis and is characterized by partial spectrin deficiency.","definition_xrefs":["NCIT:C98943"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pyropoikilocytosis, hereditary","secondary_identifiers":["Orphanet:98867","GARD:4619","OMIM:266140","SCTID:9434008","MEDGEN:141708","DOID:0061026","MESH:C563004","ICD9:790.09","UMLS:C0520739","NANDO:2200631","NORD:1276"],"synonyms":[{"name":"HPP","type":"related"},{"name":"Hypophosphatasia","type":"exact"},{"name":"hereditary pyropoikilocytosis","type":"related"},{"name":"pyropoikilocytosis","type":"exact"},{"name":"pyropoikilocytosis hereditary","type":"related"},{"name":"pyropoikilocytosis, hereditary","type":"exact"}],"termid":"MONDO:0009948","xrefs":{"Monarch":{"xref_id":"0009948"}}}


id: PBO:0068774
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 11, pseudogene","termid":"PBO:0068774"}


id: PBO:0085593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in bud-site selection; Bud14p-Glc7p complex is a cortical regulator of dynein; forms a complex with Kel1p and Kel2p that regulates Bnr1p (formin) to affect actin cable assembly, cytokinesis, and polarized growth; diploid mutants display a random budding pattern instead of the wild-type bipolar pattern; relative distribution to the nucleus increases upon DNA replication stress","termid":"PBO:0085593"}


id: GO:1904055
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of cholangiocyte proliferation.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:24434010"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of epithelial cell proliferation","termid":"GO:0050680"},{"relation_name":"is_a","term_name":"regulation of cholangiocyte proliferation","termid":"GO:1904054"},{"relation_name":"negatively_regulates","term_name":"cholangiocyte proliferation","termid":"GO:1990705"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of cholangiocyte proliferation","synonyms":[{"name":"down regulation of cholangiocyte proliferation","type":"exact"},{"name":"down regulation of hepatoblast proliferation","type":"exact"},{"name":"down-regulation of cholangiocyte proliferation","type":"exact"},{"name":"down-regulation of hepatoblast proliferation","type":"exact"},{"name":"downregulation of cholangiocyte proliferation","type":"exact"},{"name":"downregulation of hepatoblast proliferation","type":"exact"},{"name":"inhibition of cholangiocyte proliferation","type":"narrow"},{"name":"inhibition of hepatoblast proliferation","type":"narrow"},{"name":"negative regulation of hepatoblast proliferation","type":"exact"}],"termid":"GO:1904055"}


id: PBO:0064213
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase B domain containing 2","termid":"PBO:0064213"}


id: MONDO:1012831
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in the Miniature Schnauzer breed of dog and is characterized by an average age of onset of seven years, mild clinical signs, and slow progression.","definition_xrefs":["PMID:32150541"],"direct_ancestors":[{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, Miniature Schnauzer, dog","secondary_identifiers":["OMIA:002253-9615"],"termid":"MONDO:1012831","xrefs":{"Monarch":{"xref_id":"1012831"}}}


id: MOD:00510
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod N-linked glycosylation, dHex HexNAc","definition_xrefs":["RESID:AA0151#var","OMSSA:183","Unimod:142","PubMed:1694179","PubMed:111247","PubMed:5490222"],"direct_ancestors":[{"relation_name":"is_a","term_name":"N4-glycosyl-L-asparagine","termid":"MOD:00160"},{"relation_name":"is_a","term_name":"complex glycosylation","termid":"MOD:00725"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00764"}],"interesting_parent_ids":["MOD:00764"],"is_obsolete":false,"name":"HexNAc1dHex1 N4-glycosylated asparagine","synonyms":[{"name":"HexNAc(1)dHex(1)","type":"related"},{"name":"HexNAc1dHex1","type":"related"},{"name":"dHexHexNAcN","type":"exact"}],"termid":"MOD:00510"}


id: PBO:0055418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2848","termid":"PBO:0055418"}


id: PBO:0051910
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha V","termid":"PBO:0051910"}


id: PBO:0064994
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PR/SET domain 1","termid":"PBO:0064994"}


id: PBO:0067012
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 20, pseudogene","termid":"PBO:0067012"}


id: PBO:0054474
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1874","termid":"PBO:0054474"}


id: GO:0097266
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: phenylacetyl-CoA + H+ + NADPH + O2 = 2-(1,2-epoxy-1,2-dihydrophenyl)acetyl-CoA + H2O + NADP+.","definition_xrefs":["EC:1.14.13.149","GOC:bf","PMID:20660314","PMID:21247899","GOC:gk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"phenylacetyl-CoA 1,2-epoxidase activity","secondary_identifiers":["RHEA:32171","KEGG_REACTION:R09838"],"synonyms":[{"name":"phenylacetyl-CoA epoxidase activity","type":"exact"},{"name":"phenylacetyl-CoA monooxygenase activity","type":"related"},{"name":"ring 1,2-phenylacetyl-CoA epoxidase activity","type":"related"}],"termid":"GO:0097266"}


id: PBO:0054559
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1961","termid":"PBO:0054559"}


id: PATO:0002249
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A degree of pigmentation quality inhering in a bearer by virtue of the bearer's lacking substances produced by living organisms that have a color resulting from selective color absorption.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"degree of pigmentation","termid":"PATO:0002247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"unpigmented","synonyms":[{"name":"depigmented","type":"exact"}],"termid":"PATO:0002249"}


id: GO:0075265
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates, maintains or increases the frequency, rate or extent of oogonium development, a process that leads to the formation of a female gametangium of oomycetes, containing one or more gametes.","definition_xrefs":["GOC:pamgo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of spore-bearing organ development","termid":"GO:0075261"},{"relation_name":"is_a","term_name":"regulation of oogonium development","termid":"GO:0075264"},{"relation_name":"positively_regulates","term_name":"oogonium development","termid":"GO:0075263"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"positive regulation of oogonium development","termid":"GO:0075265"}


id: PBO:0031295
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_plasma_membrane_sterol_distribution","termid":"PBO:0031295"}


id: PBO:0049873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HEN methyltransferase 1","termid":"PBO:0049873"}


id: FYPO:0000201
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which histone deacetylation is abnormal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone modification during vegetative growth","termid":"FYPO:0000330"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0002494"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0002274","FYPO:0002494","FYPO:0000002"],"is_obsolete":false,"name":"abnormal histone deacetylation during vegetative growth","synonyms":[{"name":"abnormal histone deacetylation during mitotic cell cycle","type":"related"}],"termid":"FYPO:0000201"}


id: GO:0046073
data:
  {"annotated_genes":["SJAG_03771","SJAG_04627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[71864,81410],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0006231"}]},"cv_name":"biological_process","definition":"The chemical reactions and pathways involving dTMP, deoxyribosylthymine monophosphate (2'-deoxyribosylthymine 5'-phosphate).","definition_xrefs":["GOC:go_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleoside monophosphate metabolic process","termid":"GO:0009176"},{"relation_name":"is_a","term_name":"pyrimidine deoxyribonucleotide metabolic process","termid":"GO:0009219"}],"gene_count":2,"genes_by_uniquename":{"SJAG_03771":null,"SJAG_04627":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055086"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0044281","GO:0055086","GO:0008150"],"is_obsolete":false,"name":"dTMP metabolic process","references_by_uniquename":{"GO_REF:0000033":null},"synonyms":[{"name":"dTMP metabolism","type":"exact"}],"termid":"GO:0046073","terms_by_termid":{"GO:0006231":null}}


id: GO:0070785
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that decreases the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"},{"relation_name":"is_a","term_name":"negative regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900429"},{"relation_name":"negatively_regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070785"}


id: PR:Q09723
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A multifunctional methyltransferase subunit TRM112-like protein that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"multifunctional methyltransferase subunit trm112 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC31A2.02","secondary_identifiers":["UniProtKB:Q09723"],"synonyms":[{"name":"SPAC31A2.02","type":"related"},{"name":"Spom972h-TRMT112","type":"exact"},{"name":"eRF1 MTase subunit trm112 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"eRF1 methyltransferase subunit trm112 (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"tRNA methyltransferase 112 homolog (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:Q09723"}


id: MONDO:0016024
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"thoracic malformation","termid":"MONDO:0015929"},{"relation_name":"is_a","term_name":"dysostosis","termid":"MONDO:0018234"},{"relation_name":"is_a","term_name":"congenital limb malformation","termid":"MONDO:0019054"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"shoulder and thorax deformity-congenital heart disease syndrome","secondary_identifiers":["Orphanet:1940","GARD:4859"],"termid":"MONDO:0016024","xrefs":{"Monarch":{"xref_id":"0016024"}}}


id: MONDO:0007912
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lithium transport","secondary_identifiers":["OMIM:152420","UMLS:C1835356","MEDGEN:331956"],"synonyms":[{"name":"lithium transport","type":"exact"}],"termid":"MONDO:0007912","xrefs":{"Monarch":{"xref_id":"0007912"}}}


id: MONDO:0008629
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"urolithiasis, uric acid, autosomal dominant","secondary_identifiers":["DOID:0080654","OMIM:191700","UMLS:C2674049","MEDGEN:393068"],"synonyms":[{"name":"nephrolithiasis, uric acid, autosomal dominant","type":"related"},{"name":"urolithiasis, uric acid, autosomal dominant","type":"exact"}],"termid":"MONDO:0008629","xrefs":{"Monarch":{"xref_id":"0008629"}}}


id: PBO:0064983
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proline rich acidic protein 1","termid":"PBO:0064983"}


id: PBO:0074333
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1","termid":"PBO:0074333"}


id: GO:0031985
data:
  {"annotated_genes":["SJAG_01516","SJAG_04095","SJAG_00816","SJAG_04770","SJAG_00567","SJAG_03278","SJAG_03634","SJAG_04112","SJAG_04739","SJAG_03555","SJAG_01276","SJAG_03347","SJAG_01025"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[79535],"is_not":false,"summary":null,"term":"GO:0031985"},{"annotations":[77664,98065],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000137"},{"annotations":[73359,100101,78497,80595],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0005797"},{"annotations":[101520,78496,80594,98066,73358],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000138"},{"annotations":[72010],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0000136"},{"annotations":[120120,71705,89503,60237],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0140497"}]},"cv_name":"cellular_component","definition":"Any of the thin, flattened membrane-bounded compartments that form the central portion of the Golgi complex.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Golgi apparatus subcompartment","termid":"GO:0098791"},{"relation_name":"part_of","term_name":"Golgi stack","termid":"GO:0005795"}],"gene_count":13,"genes_by_uniquename":{"SJAG_00567":null,"SJAG_00816":null,"SJAG_01025":null,"SJAG_01276":null,"SJAG_01516":null,"SJAG_03278":null,"SJAG_03347":null,"SJAG_03555":null,"SJAG_03634":null,"SJAG_04095":null,"SJAG_04112":null,"SJAG_04739":null,"SJAG_04770":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0005794"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005737","GO:0005794","GO:0005575"],"is_obsolete":false,"name":"Golgi cisterna","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["NIF_Subcellular:sao561419532"],"synonyms":[{"name":"Golgi apparatus cisterna","type":"exact"},{"name":"Golgi lamellae","type":"related"}],"termid":"GO:0031985","terms_by_termid":{"GO:0000136":null,"GO:0000137":null,"GO:0000138":null,"GO:0005797":null,"GO:0031985":null,"GO:0140497":null}}


id: PBO:0047999
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FERM domain containing 1","termid":"PBO:0047999"}


id: PBO:0054256
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 1640","termid":"PBO:0054256"}


id: PBO:0064168
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phospholipase A2 group IVE","termid":"PBO:0064168"}


id: PBO:0087436
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit e of mitochondrial F1F0-ATPase; ATPase is a large, evolutionarily conserved enzyme complex required for ATP synthesis; essential for the dimeric and oligomeric state of ATP synthase, which in turn determines the shape of inner membrane cristae","termid":"PBO:0087436"}


id: MONDO:0006277
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lymphangiomyomatosis involving the lungs and local lymph nodes. Patients usually present with chylous pleural effusion. The clinical course is variable. Patients with resectable lesions usually have a favorable clinical outcome. Patients with diffuse lesions usually have a progressive clinical course.","definition_xrefs":["NCIT:C38153"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"lung carcinoma","termid":"MONDO:0005138"},{"relation_name":"is_a","term_name":"lymphangioleiomyomatosis","termid":"MONDO:0011705"},{"relation_name":"is_a","term_name":"lung PEComa","termid":"MONDO:0020588"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lung lymphangioleiomyomatosis","secondary_identifiers":["UMLS:C0349649","MedDRA:10049459","MEDGEN:91161","Orphanet:538","DOID:3319","EFO:1000334","ICD9:518.89","GARD:3319","SCTID:277844007","ONCOTREE:LAM"],"synonyms":[{"name":"Lymphangioleiomyomatosis","type":"broad"},{"name":"lung lymphangioleiomyomatosis","type":"exact"},{"name":"lung lymphangiomyomatosis","type":"exact"},{"name":"lymphangioleiomyomatosis","type":"broad"},{"name":"pulmonary lymphangioleiomyomatosis","type":"exact"},{"name":"pulmonary lymphangiomyomatosis","type":"related"}],"termid":"MONDO:0006277","xrefs":{"Monarch":{"xref_id":"0006277"}}}


id: GO:0061330
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a relatively unspecialized cell acquires specialized features of a Malpighian tubule stellate cell. A Malpighian tubule stellate cell is a specialized epithelial secretory cell that moves chloride ions and water across the tubule epithelium.","definition_xrefs":["GOC:mtg_kidney_jan10","GOC:dph","PMID:19783135"],"direct_ancestors":[{"relation_name":"is_a","term_name":"epithelial cell differentiation","termid":"GO:0030855"},{"relation_name":"part_of","term_name":"Malpighian tubule development","termid":"GO:0072002"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"Malpighian tubule stellate cell differentiation","termid":"GO:0061330"}


id: PBO:0087384
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sterol regulatory element binding protein; induces sterol biosynthetic genes, upon sterol depletion; acts as a sterol sensor, binding ergosterol in sterol rich conditions; relocates from intracellular membranes to perinuclear foci upon sterol depletion; redundant activator of filamentation with ECM22, up-regulating the expression of filamentous growth genes; contains a Zn[2]-Cys[6] binuclear cluster; UPC2 has a paralog, ECM22, that arose from the whole genome duplication","termid":"PBO:0087384"}


id: MONDO:0018142
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Severe neonatal pyruvate carboxylase (PC) deficiency (Type B) is a rare, extremely severe form of PC deficiency characterized by severe, early-onset metabolic acidosis, and a generally fatal outcome in early infancy.","definition_xrefs":["Orphanet:353314"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pyruvate carboxylase deficiency disease","termid":"MONDO:0009949"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0037792"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0037792","MONDO:0005066"],"is_obsolete":false,"name":"pyruvate carboxylase deficiency, severe neonatal type","secondary_identifiers":["UMLS:C5679929","GARD:17537","MEDGEN:1842956"],"synonyms":[{"name":"pyruvate carboxylase deficiency type B","type":"exact"}],"termid":"MONDO:0018142","xrefs":{"Monarch":{"xref_id":"0018142"}}}


id: GO:1903423
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of synaptic vesicle recycling.","definition_xrefs":["GOC:pad","PMID:22745285","GO_REF:0000058","GOC:TermGenie","GOC:PARL"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of transport","termid":"GO:0051050"},{"relation_name":"is_a","term_name":"regulation of synaptic vesicle recycling","termid":"GO:1903421"},{"relation_name":"positively_regulates","term_name":"synaptic vesicle recycling","termid":"GO:0036465"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"positively_regulates","termid":"GO:0006810"}],"interesting_parent_ids":["GO:0008150","GO:0006810"],"is_obsolete":false,"name":"positive regulation of synaptic vesicle recycling","synonyms":[{"name":"activation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"activation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"activation of synaptic vesicle recycling","type":"narrow"},{"name":"positive regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"positive regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"up regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"up regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"up regulation of synaptic vesicle recycling","type":"exact"},{"name":"up-regulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"up-regulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"up-regulation of synaptic vesicle recycling","type":"exact"},{"name":"upregulation of kiss-and-run synaptic vesicle recycling","type":"narrow"},{"name":"upregulation of kiss-and-stay synaptic vesicle recycling","type":"narrow"},{"name":"upregulation of synaptic vesicle recycling","type":"exact"}],"termid":"GO:1903423"}


id: PBO:0040703
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BCL2L2-PABPN1 readthrough","termid":"PBO:0040703"}


id: MONDO:0006972
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A form of alveolitis or pneumonitis caused by hypersensitivity to high level of inhaled nitrogen oxides, decomposition products of silage.","definition_xrefs":["MESH:D012832"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lung disorder","termid":"MONDO:0005275"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silo filler disease","secondary_identifiers":["DOID:4374","MEDGEN:11428","icd11.foundation:1960063586","SCTID:61233003","UMLS:C0037120"],"synonyms":[{"name":"silo filler disease","type":"exact"},{"name":"silo filler's disease","type":"related"},{"name":"silo-fillers' disease","type":"exact"}],"termid":"MONDO:0006972","xrefs":{"Monarch":{"xref_id":"0006972"}}}


id: PBO:0065842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RAB9B, member RAS oncogene family pseudogene 1","termid":"PBO:0065842"}


id: GO:0060439
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a trachea is generated and organized. The trachea is the portion of the airway that attaches to the bronchi as it branches.","definition_xrefs":["GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"animal organ morphogenesis","termid":"GO:0009887"},{"relation_name":"part_of","term_name":"trachea development","termid":"GO:0060438"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"trachea morphogenesis","termid":"GO:0060439"}


id: GO:0140743
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the synthesis of a lncRNA.","definition_xrefs":["PMID:33767452","PMID:33913806"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of DNA-templated transcription","termid":"GO:0006355"},{"relation_name":"regulates","term_name":"lncRNA transcription","termid":"GO:0140742"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006355"},{"rel_name":"regulates","termid":"GO:0006351"}],"interesting_parent_ids":["GO:0008150","GO:0006355","GO:0010467","GO:0006351"],"is_obsolete":false,"name":"regulation of lncRNA transcription","termid":"GO:0140743"}


id: PBO:0073854
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SLC9A3R1 antisense RNA 1","termid":"PBO:0073854"}


id: MONDO:1010303
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spinal stenosis that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"spinal stenosis, non-human animal","secondary_identifiers":["OMIA:000947"],"termid":"MONDO:1010303","xrefs":{"Monarch":{"xref_id":"1010303"}}}


id: PBO:0047731
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"formin binding protein 1 like","termid":"PBO:0047731"}


id: MONDO:0023212
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Garret-Tripp syndrome","secondary_identifiers":["UMLS:C2930965","MEDGEN:419297","MESH:C535646"],"synonyms":[{"name":"Garret Tripp syndrome","type":"related"},{"name":"Intellectual disability with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"intellectual disability with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"mental retardation with postaxial polydactyly, congenital absence of hair, severe seborrhoeic dermatitis, and Perthes' disease of the hip","type":"related"},{"name":"polydactyly alopecia seborrheic dermatitis","type":"related"}],"termid":"MONDO:0023212","xrefs":{"Monarch":{"xref_id":"0023212"}}}


id: GO:0140879
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of conidiogenone , a diterpene known to induce the conidiation.","definition_xrefs":["PMID:30343633"],"direct_ancestors":[{"relation_name":"is_a","term_name":"diterpenoid biosynthetic process","termid":"GO:0016102"},{"relation_name":"is_a","term_name":"ketone biosynthetic process","termid":"GO:0042181"},{"relation_name":"is_a","term_name":"mycotoxin biosynthetic process","termid":"GO:0043386"},{"relation_name":"is_a","term_name":"secondary alcohol biosynthetic process","termid":"GO:1902653"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0019748"}],"interesting_parent_ids":["GO:0019748","GO:0008150","GO:0006629","GO:0044281"],"is_obsolete":false,"name":"conidiogenone biosynthetic process","synonyms":[{"name":"conidiogenone anabolism","type":"exact"},{"name":"conidiogenone biosynthesis","type":"exact"},{"name":"conidiogenone formation","type":"exact"},{"name":"conidiogenone synthesis","type":"exact"}],"termid":"GO:0140879"}


id: MONDO:0015669
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare disease with dentinogenesis imperfecta (obsolete MONDO:0015669)","secondary_identifiers":["Orphanet:167762"],"termid":"MONDO:0015669","xrefs":{"Monarch":{"xref_id":"0015669"}}}


id: MONDO:0012064
data:
  {"annotated_genes":["SJAG_04222"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87592],"is_not":false,"summary":null,"term":"MONDO:0012064"}]},"cv_name":"mondo","definition":"Choanal atresia - deafness - cardiac defects - dysmorphism syndrome, also known as Burn-McKeown syndrome, is an extremely rare multiple congenital anomaly syndrome characterized by bilateral choanal atresia associated with a characteristic cranio-facial dysmorphism (hypertelorism with narrow palpebral fissures, coloboma of inferior eyelid with presence of eyelashes medial to the defect, prominent nasal bridge, thin lips, prominent ears), that can be accompanied by hearing loss, unilateral cleft lip, preauricular tags, cardiac septal defects and anomalies of the kidneys. The features of this syndrome overlaps considerably with those of the CHARGE syndrome.","definition_xrefs":["Orphanet:1200"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"},{"relation_name":"is_a","term_name":"multiple congenital anomalies/dysmorphic syndrome without intellectual disability","termid":"MONDO:0015161"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04222":null},"genotype_count":0,"is_obsolete":false,"name":"choanal atresia-hearing loss-cardiac defects-craniofacial dysmorphism syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["DOID:0080695","MEDGEN:325265","GARD:10041","MESH:C563682","UMLS:C1837822","OMIM:608572"],"synonyms":[{"name":"BMKS","type":"related"},{"name":"Burn-McKeown syndrome","type":"exact"},{"name":"bilateral choanal atresia, cardiac defects, deafness, and dysmorphic appearance","type":"related"},{"name":"choanal atresia deafness cardiac defects dysmorphism","type":"related"},{"name":"oculootofacial dysplasia","type":"exact"}],"termid":"MONDO:0012064","terms_by_termid":{"MONDO:0012064":null},"xrefs":{"Monarch":{"xref_id":"0012064"}}}


id: _global:regulates_o_results_in_development_of
data:
  {"annotation_feature_type":"gene","cv_name":"go/extensions/gorel","definition":"This is the combination of the regulates relation with the results_in_development_of relation.","definition_xrefs":["GOC:mtg_berkeley_2013"],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"regulates_development_of","secondary_identifiers":["GOREL:0001023"],"synonyms":[{"name":"regulates_o_results_in_development_of","type":"exact"}],"termid":"_global:regulates_o_results_in_development_of"}


id: SO:0000651
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"Cytosolic LSU rRNA is an RNA component of the large subunit of cytosolic ribosomes.","definition_xrefs":["SO:ke"],"direct_ancestors":[{"relation_name":"derives_from","term_name":"rRNA_large_subunit_primary_transcript","termid":"SO:0000325"},{"relation_name":"is_a","term_name":"cytosolic_rRNA","termid":"SO:0002343"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytosolic_LSU_rRNA","synonyms":[{"name":"cytosolic LSU RNA","type":"exact"},{"name":"cytosolic LSU rRNA","type":"exact"},{"name":"cytosolic large subunit rRNA","type":"exact"}],"termid":"SO:0000651"}


id: PBO:0036517
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"nuclear cap-binding complex variant subunit Cbc3","termid":"PBO:0036517"}


id: PBO:0083441
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the verified and essential ORF SPT6/YGR115C","termid":"PBO:0083441"}


id: GO:0052811
data:
  {"annotated_genes":["SJAG_01863"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93861],"is_not":false,"summary":null,"term":"GO:0052811"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ATP = a 1-phosphatidyl-1D-myo-inositol 3,4-bisphosphate + ADP + H+.","definition_xrefs":["RHEA:63688","PMID:9660759","PMID:9367159","PMID:9211928"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphatidylinositol kinase activity","termid":"GO:0052742"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01863":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0003674","GO:0016740"],"is_obsolete":false,"name":"1-phosphatidylinositol-3-phosphate 4-kinase activity","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["Reactome:R-HSA-1676145","MetaCyc:RXN-10957"],"synonyms":[{"name":"phosphatidylinositol 3-phosphate 4-kinase activity","type":"exact"}],"termid":"GO:0052811","terms_by_termid":{"GO:0052811":null}}


id: PBO:0058847
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 8076","termid":"PBO:0058847"}


id: GO:0007345
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Formation and development of an embryo and its organized structures.","definition_xrefs":["GOC:ems","ISBN:0070524300","ISBN:0140512888"],"gene_count":0,"genotype_count":0,"name":"obsolete embryogenesis and morphogenesis (obsolete GO:0007345)","synonyms":[{"name":"embryogenesis and morphogenesis","type":"exact"}],"termid":"GO:0007345"}


id: PBO:0056997
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 34c","termid":"PBO:0056997"}


id: PBO:0121049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tripartite motif containing 64J, pseudogene","termid":"PBO:0121049"}


id: MONDO:0018704
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete actinomycosis (obsolete MONDO:0018704)","termid":"MONDO:0018704","xrefs":{"Monarch":{"xref_id":"0018704"}}}


id: PBO:0083406
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Dubious open reading frame; unlikely to encode a functional protein, based on available experimental and comparative sequence data; partially overlaps the dubious ORF YHR032W-A","termid":"PBO:0083406"}


id: GO:0044145
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the progression of an organism from an initial condition to a later condition, occurring in, on or near the exterior of its host organism.","definition_xrefs":["GOC:pamgo_curators","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of biological process","termid":"GO:0050789"},{"relation_name":"regulates","term_name":"formation of structure involved in a symbiotic process","termid":"GO:0044111"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"modulation of formation of structure involved in a symbiotic process","synonyms":[{"name":"modulation of development of symbiont during interaction with host","type":"related"},{"name":"modulation of development of symbiont involved in interaction with host","type":"related"}],"termid":"GO:0044145"}


id: MONDO:0030335
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital diarrhea","termid":"MONDO:0000824"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335"],"is_obsolete":false,"name":"diarrhea 12, with microvillus atrophy","secondary_identifiers":["MEDGEN:1794152","OMIM:619445","UMLS:C5561942"],"synonyms":[{"name":"DIAR12","type":"exact"},{"name":"diarrhea 12, with microvillus atrophy","type":"exact"},{"name":"microvillus inclusion disease 2","type":"exact"}],"termid":"MONDO:0030335","xrefs":{"Monarch":{"xref_id":"0030335"}}}


id: PBO:0045026
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DIRC3 antisense RNA 1","termid":"PBO:0045026"}


id: MONDO:0007738
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"CHST3-related skeletal dysplasia is a very rare bone disorder characterized clinically by short stature of prenatal onset; dislocation of the knees, hips or elbows; club feet; limitation of range of motion of large joints; progressive kyphosis; and occasional scoliosis. In a few patients, minor heart valve dysplasia has also been described. Intellect, vision and hearing are normal.","definition_xrefs":["Orphanet:263463"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with multiple joint dislocations (obsolete MONDO:0019700)","termid":"MONDO:0019700"},{"relation_name":"is_a","term_name":"mineral metabolism disease","termid":"MONDO:0000226"},{"relation_name":"is_a","term_name":"spondyloepiphyseal dysplasia","termid":"MONDO:0016761"},{"relation_name":"is_a","term_name":"inborn errors of metabolism","termid":"MONDO:0019052"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497","MONDO:0005066"],"is_obsolete":false,"name":"spondyloepiphyseal dysplasia with congenital joint dislocations","secondary_identifiers":["MEDGEN:373381","GARD:13169","DOID:0050813","MESH:C537283","ICD9:756.9","OMIM:143095","UMLS:C1837657","SCTID:702400006"],"synonyms":[{"name":"CHST3-related skeletal dysplasia","type":"exact"},{"name":"Gollop Coates syndrome","type":"related"},{"name":"Humerospinal dysostosis","type":"exact"},{"name":"Kozlowski Celermajer tink syndrome","type":"exact"},{"name":"Omani type","type":"exact"},{"name":"SDCD, CHST3 type","type":"exact"},{"name":"SEDCJD","type":"related"},{"name":"bifurcation of distal humerus with oligoectro-syndactyly","type":"related"},{"name":"chondrodysplasia with congenital joint dislocations, CHST3 type","type":"exact"},{"name":"chondrodysplasia with multiple dislocations","type":"exact"},{"name":"humero-spinal dysostosis with congenital heart disease","type":"exact"},{"name":"spondyloepiphyseal dysplasia","type":"broad"},{"name":"spondyloepiphyseal dysplasia with congenital JOINT dislocations","type":"related"},{"name":"spondyloepiphyseal dysplasia with congenital joint dislocations","type":"exact"},{"name":"spondyloepiphyseal dysplasia with congenital joint dyslocations, CHST3 type","type":"exact"},{"name":"spondyloepiphyseal dysplasia, Omani type","type":"related"}],"termid":"MONDO:0007738","xrefs":{"Monarch":{"xref_id":"0007738"}}}


id: PBO:0016971
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP-dependent polydeoxyribonucleotide 5'-hydroxyl-kinase activity implicated in DNA repair (predicted)","termid":"PBO:0016971"}


id: PBO:0040357
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase membrane subunit g pseudogene 6","termid":"PBO:0040357"}


id: PBO:0061882
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oocyte secreted protein family member 4B","termid":"PBO:0061882"}


id: PBO:0108762
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Ageing-Associated LncRNA","termid":"PBO:0108762"}


id: GO:0052488
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. This term was not defined before being made obsolete.","definition_xrefs":["GOC:mtg_pamgo"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity (obsolete GO:0052488)","synonyms":[{"name":"negative regulation by organism of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of MAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP induced symbiont innate immunity","type":"exact"},{"name":"suppression of PAMP-induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor induced symbiont innate immunity","type":"exact"},{"name":"suppression of general elicitor-induced symbiont innate immunity","type":"exact"},{"name":"suppression of pathogen-associated molecular pattern-induced symbiont innate immunity","type":"exact"}],"termid":"GO:0052488"}


id: GO:0047622
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: adenosine + H2O = D-ribose + adenine.","definition_xrefs":["MetaCyc:ADENOSINE-NUCLEOSIDASE-RXN","EC:3.2.2.7"],"direct_ancestors":[{"relation_name":"is_a","term_name":"purine nucleosidase activity","termid":"GO:0008477"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016798"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"}],"interesting_parent_ids":["GO:0003674","GO:0003824","GO:0016798","GO:0016787"],"is_obsolete":false,"name":"adenosine nucleosidase activity","secondary_identifiers":["RHEA:18669"],"synonyms":[{"name":"ANase activity","type":"related"},{"name":"N-ribosyladenine ribohydrolase activity","type":"related"},{"name":"adenosinase activity","type":"related"},{"name":"adenosine hydrolase activity","type":"related"},{"name":"adenosine ribohydrolase activity","type":"related"}],"termid":"GO:0047622"}


id: PBO:0053628
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 673","termid":"PBO:0053628"}


id: MONDO:0020727
data:
  {"annotated_genes":["SJAG_02564"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88876],"is_not":false,"summary":null,"term":"MONDO:0020727"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial proton-transporting ATP synthase complex deficiency","termid":"MONDO:0014471"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02564":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"combined oxidative phosphorylation deficiency 22","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C4015062","OMIM:616045","DOID:0111498","MEDGEN:863499"],"synonyms":[{"name":"COXPD22","type":"related"},{"name":"combined oxidative phosphorylation deficiency 22","type":"exact"},{"name":"combined oxidative phosphorylation deficiency type 22","type":"related"}],"termid":"MONDO:0020727","terms_by_termid":{"MONDO:0020727":null},"xrefs":{"Monarch":{"xref_id":"0020727"}}}


id: FYPO:0005453
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which chromosomal translocation that would result in the loss of one of two different alleles of a gene does not occur.","definition_xrefs":["PMID:17724078","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"vegetative cell phenotype","termid":"FYPO:0001320"},{"relation_name":"is_a","term_name":"abnormal cell phenotype","termid":"FYPO:0003037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0000002"],"is_obsolete":false,"name":"abolished break-induced loss of heterozygosity via chromosomal translocation","synonyms":[{"name":"abolished break-induced loss of heterozygosity via chromosomal translocation during mitotic cell cycle","type":"related"},{"name":"abolished break-induced loss of heterozygosity via chromosomal translocation during vegetative growth","type":"exact"},{"name":"break-induced loss of heterozygosity via chromosomal translocation abolished","type":"exact"}],"termid":"FYPO:0005453"}


id: PBO:0036447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PAN complex protein phosphotransferase subunit Ppk26 (predicted)","termid":"PBO:0036447"}


id: PBO:0005242
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Pho85/PhoA-like cyclin-dependent kinase Pef1","termid":"PBO:0005242"}


id: MONDO:0019592
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. In gonochoristic organisms, congenital conditions in which development of chromosomal, gonadal, or anatomical sex is atypical. Effects from exposure to abnormal levels of gonadal hormones in the maternal environment, or disruption of the function of those hormones by ENDOCRINE DISRUPTORS are included.","definition_xrefs":["MESH:D012734"],"gene_count":0,"genotype_count":0,"name":"obsolete disorder of sex development (obsolete MONDO:0019592)","termid":"MONDO:0019592","xrefs":{"Monarch":{"xref_id":"0019592"}}}


id: PBO:0084227
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H subunit of the mitochondrial glycine decarboxylase complex; glycine decarboxylase is required for the catabolism of glycine to 5,10-methylene-THF; also required for all protein lipoylation; expression is regulated by levels of 5,10-methylene-THF","termid":"PBO:0084227"}


id: PBO:0028343
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_post-anaphase_array","termid":"PBO:0028343"}


id: FYPO:0008389
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A regulation phenotype observed in the vegetative growth phase of the life cycle in which activation of growth at the old end of a cell happens during cell division, before digestion of the septum.","definition_xrefs":["PMID:34523683"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal activation of monopolar cell growth","termid":"FYPO:0001393"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"activation of monopolar cell growth at old end during septation","termid":"FYPO:0008389"}


id: PBO:0061397
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NPPA antisense RNA 1","termid":"PBO:0061397"}


id: GO:0097122
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A protein complex consisting of cyclin A2 and cyclin-dependent kinase 1 (CDK1). Cyclins are characterized by periodicity in protein abundance throughout the cell cycle. Cyclin-dependent kinases represent a family of serine/threonine protein kinases that become active upon binding to a cyclin regulatory partner.","definition_xrefs":["GOC:so","PMID:15935619"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cyclin-dependent protein kinase holoenzyme complex","termid":"GO:0000307"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0032991"],"is_obsolete":false,"name":"cyclin A2-CDK1 complex","termid":"GO:0097122"}


id: PBO:0069801
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6 small nuclear 1087, pseudogene","termid":"PBO:0069801"}


id: MONDO:0100199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary neoplastic syndrome","termid":"MONDO:0015356"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"diffuse gastric and lobular breast cancer syndrome with or without cleft lip and/or palate","termid":"MONDO:0100199","xrefs":{"Monarch":{"xref_id":"0100199"}}}


id: PBO:0083721
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ER-resident protein involved in peroxisomal biogenesis; ER-localized protein that associates with peroxisomes; interacts with Pex30p and reticulons Rtn1p and Yop1p to regulate peroxisome biogenesis from the ER; role in peroxisomal-destined vesicular flow from the ER; regulates peroxisomal size, number and distribution; Pex28p and Pex29p may act at steps upstream of those mediated by Pex30p, Pex31p, and Pex32p; forms ER foci upon DNA replication stress","termid":"PBO:0083721"}


id: MONDO:0011604
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Spondylo-ocular syndrome is a very rare association of spinal and ocular manifestations that is characterized by dense cataracts, and retinal detachment along with generalized osteoporosis and platyspondyly. Mild craniofacial dysphormism has been reported including short neck, large head and prominent eyebrows.","definition_xrefs":["Orphanet:85194"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"obsolete primary bone dysplasia with decreased bone density (obsolete MONDO:0019704)","termid":"MONDO:0019704"},{"relation_name":"is_a","term_name":"congenital vitreoretinal dysplasia","termid":"MONDO:0020247"},{"relation_name":"is_a","term_name":"osteogenesis imperfecta and a reduction of bone mineral density.","termid":"MONDO:0800064"},{"relation_name":"is_a","term_name":"linkeropathy","termid":"MONDO:1040022"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"},{"rel_name":"is_a","termid":"MONDO:0002320"},{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0002320","MONDO:0005497","MONDO:0005328"],"is_obsolete":false,"name":"spondylo-ocular syndrome","secondary_identifiers":["UMLS:C4225412","MEDGEN:900371","GARD:16740","icd11.foundation:1611450426","OMIM:605822","SCTID:715653007"],"synonyms":[{"name":"SOS","type":"related"},{"name":"spondyloocular syndrome","type":"related"}],"termid":"MONDO:0011604","xrefs":{"Monarch":{"xref_id":"0011604"}}}


id: PBO:0006206
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-chemical,_gene_product,_or_complex","termid":"PBO:0006206"}


id: GO:0103102
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: UDP-alpha-D-glucose + 8-methylthiooctylhydroximate = H+ + 7-methylthioheptyldesulfoglucosinolate + UDP.","definition_xrefs":["GOC:pz"],"gene_count":0,"genotype_count":0,"name":"obsolete UDP-glucose:8-methylthiooctylhydroximate S-glucosyltransferase activity (obsolete GO:0103102)","termid":"GO:0103102"}


id: MONDO:0009834
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pancreatic insufficiency, combined exocrine (obsolete MONDO:0009834)","termid":"MONDO:0009834","xrefs":{"Monarch":{"xref_id":"0009834"}}}


id: MONDO:0011576
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial hyperaldosteronism type II (FH-II) is a heritable form of primary aldosteronism (PA) characterized by hypertension of varying severity, and non glucocticoid remediable hyperaldosteronism.","definition_xrefs":["Orphanet:404"],"direct_ancestors":[{"relation_name":"is_a","term_name":"familial hyperaldosteronism","termid":"MONDO:0016525"},{"relation_name":"is_a","term_name":"adrenal cortex neoplasm","termid":"MONDO:0036591"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"familial hyperaldosteronism type II","secondary_identifiers":["OMIM:605635","GARD:2789","SCTID:703233008","NCIT:C127162","UMLS:C1854107","MESH:C565312","MEDGEN:340137"],"synonyms":[{"name":"FH 2","type":"related"},{"name":"FH-II","type":"exact"},{"name":"FH2","type":"exact"},{"name":"FHII","type":"related"},{"name":"HALD2","type":"related"},{"name":"familial adrenal adenoma","type":"exact"},{"name":"familial hyperaldosteronism type 2","type":"exact"},{"name":"hyperaldosteronism, familial, type II","type":"related"}],"termid":"MONDO:0011576","xrefs":{"Monarch":{"xref_id":"0011576"}}}


id: GO:0051525
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to NFAT (nuclear factor of activated T cells) proteins, a family of transcription factors. NFAT proteins have crucial roles in the development and function of the immune system.","definition_xrefs":["PMID:15928679"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA polymerase II-specific DNA-binding transcription factor binding","termid":"GO:0061629"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"NFAT protein binding","secondary_identifiers":["GO:0051526","GO:0051528","GO:0051529","GO:0051527","GO:0051530"],"synonyms":[{"name":"NFAT binding","type":"exact"},{"name":"NFAT1 protein binding","type":"narrow"},{"name":"NFAT2 protein binding","type":"narrow"},{"name":"NFAT3 protein binding","type":"narrow"},{"name":"NFAT4 protein binding","type":"narrow"},{"name":"NFAT5 protein binding","type":"narrow"},{"name":"NFATc binding","type":"narrow"},{"name":"NFATc1 binding","type":"narrow"},{"name":"NFATc2 binding","type":"narrow"},{"name":"NFATc3 binding","type":"narrow"},{"name":"NFATc4 binding","type":"narrow"},{"name":"NFATp binding","type":"narrow"},{"name":"NFATx binding","type":"narrow"},{"name":"non-calcium-regulated NFAT protein binding","type":"narrow"},{"name":"nuclear factor of activated T cell protein binding","type":"exact"}],"termid":"GO:0051525"}


id: PBO:0076476
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transporter 1, ATP binding cassette subfamily B member","termid":"PBO:0076476"}


id: GO:0005436
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: Na+(out) + phosphate(out) = Na+(in) + phosphate(in).","definition_xrefs":["TC:2.A.1.14.6"],"direct_ancestors":[{"relation_name":"is_a","term_name":"phosphate transmembrane transporter activity","termid":"GO:0005315"},{"relation_name":"is_a","term_name":"solute:sodium symporter activity","termid":"GO:0015370"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0003674","GO:0005215","GO:0022857"],"is_obsolete":false,"name":"sodium:phosphate symporter activity","secondary_identifiers":["Reactome:R-HSA-5651697","Reactome:R-HSA-2872498","Reactome:R-HSA-5651685","Reactome:R-HSA-5625123","Reactome:R-HSA-5651971","Reactome:R-HSA-5687585","Reactome:R-HSA-427645","Reactome:R-HSA-427656","GO:0015321","Reactome:R-HSA-427605","Reactome:R-HSA-428609"],"synonyms":[{"name":"sodium-dependent phosphate transmembrane transporter activity","type":"related"},{"name":"sodium/phosphate symporter activity","type":"exact"}],"termid":"GO:0005436"}


id: MONDO:0006432
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Wilms tumor of the kidney characterized by the predominance of the mesenchymal component.","definition_xrefs":["NCIT:C9148"],"direct_ancestors":[{"relation_name":"is_a","term_name":"kidney Wilms tumor","termid":"MONDO:0019004"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005240"],"is_obsolete":false,"name":"stromal predominant kidney Wilms tumor","secondary_identifiers":["DOID:5191","MEDGEN:83529","UMLS:C0279610"],"synonyms":[{"name":"stromal predominant Wilms tumor","type":"exact"},{"name":"stromal predominant Wilms tumour","type":"exact"},{"name":"stromal predominant kidney Wilms tumor","type":"exact"},{"name":"stromal predominant kidney Wilms' tumor","type":"exact"},{"name":"stromal predominant kidney Wilms' tumour","type":"exact"},{"name":"stromal predominant kidney adenosarcoma","type":"exact"},{"name":"stromal predominant nephroblastoma","type":"exact"},{"name":"stromal predominant renal Wilm's tumor","type":"exact"},{"name":"stromal predominant renal Wilm's tumour","type":"exact"},{"name":"stromal predominant renal Wilms tumor","type":"exact"},{"name":"stromal predominant renal Wilms tumour","type":"exact"},{"name":"stromal predominant renal Wilms' tumor","type":"exact"},{"name":"stromal predominant renal Wilms' tumour","type":"exact"},{"name":"stromal predominant renal adenosarcoma","type":"exact"}],"termid":"MONDO:0006432","xrefs":{"Monarch":{"xref_id":"0006432"}}}


id: MONDO:0001750
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"secondary hyperparathyroidism","termid":"MONDO:0006964"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-renal secondary hyperparathyroidism","secondary_identifiers":["DOID:13575","MEDGEN:845321","UMLS:C3874997","ICD9:252.02"],"termid":"MONDO:0001750","xrefs":{"Monarch":{"xref_id":"0001750"}}}


id: MONDO:0003499
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A squamous cell carcinoma of the skin with a prominent spindle cell component.","definition_xrefs":["NCIT:C4666"],"direct_ancestors":[{"relation_name":"is_a","term_name":"skin squamous cell carcinoma","termid":"MONDO:0002529"},{"relation_name":"is_a","term_name":"keratinizing squamous cell carcinoma","termid":"MONDO:0005056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005093"}],"interesting_parent_ids":["MONDO:0005093","MONDO:0004992"],"is_obsolete":false,"name":"sarcomatoid squamous cell skin carcinoma","secondary_identifiers":["UMLS:C0349656","SCTID:403900000","DOID:5536","MEDGEN:87611","NCIT:C27084","SCTID:254653005"],"synonyms":[{"name":"spindle cell (sarcomatoid) squamous cell carcinoma","type":"related"},{"name":"spindle cell (sarcomatoid) squamous cell skin carcinoma","type":"exact"},{"name":"spindle cell squamous carcinoma of skin","type":"exact"},{"name":"spindle cell squamous carcinoma of the skin","type":"exact"},{"name":"spindle cell squamous cell carcinoma","type":"exact"}],"termid":"MONDO:0003499","xrefs":{"Monarch":{"xref_id":"0003499"}}}


id: PBO:0038671
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"acyl-CoA synthetase long chain family member 5","termid":"PBO:0038671"}


id: FYPO:0005775
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to acetaldehyde. Cells stop growing (and may die) at a concentration of acetaldehyde that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"sensitive to acetaldehyde","synonyms":[{"name":"hypersensitive to acetaldehyde","type":"exact"},{"name":"sensitive to acetaldehyde during mitotic cell cycle","type":"related"},{"name":"sensitive to acetaldehyde during vegetative growth","type":"exact"}],"termid":"FYPO:0005775"}


id: PBO:0066786
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RN7SK pseudogene 85","termid":"PBO:0066786"}


id: MONDO:0014638
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Fanconi anemia in which the cause of the disease is a mutation in the UBE2T gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Fanconi anemia","termid":"MONDO:0019391"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0021190"},{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0002280"}],"interesting_parent_ids":["MONDO:0005046","MONDO:0005066","MONDO:0021190","MONDO:0002280","MONDO:0005570"],"is_obsolete":false,"name":"Fanconi anemia complementation group T","secondary_identifiers":["OMIM:616435","DOID:0111081","GARD:16111","UMLS:C4084840","MEDGEN:896157"],"synonyms":[{"name":"FANCT","type":"exact"},{"name":"Fanconi Anemia, complementation group type T","type":"exact"},{"name":"Fanconi anaemia caused by mutation in UBE2T","type":"exact"},{"name":"Fanconi anaemia complementation group type T","type":"exact"},{"name":"Fanconi anemia caused by mutation in UBE2T","type":"exact"},{"name":"Fanconi anemia complementation group type T","type":"exact"},{"name":"Fanconi anemia, complementation group T","type":"related"},{"name":"UBE2T Fanconi anaemia","type":"exact"},{"name":"UBE2T Fanconi anemia","type":"exact"}],"termid":"MONDO:0014638","xrefs":{"Monarch":{"xref_id":"0014638"}}}


id: FYPO:0007314
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which acetylation of lysine at position 12 of histone H4 at the central core of the centromeric regions occurs to a greater extent than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased histone H4-K12 acetylation at centromere during vegetative growth","termid":"FYPO:0007306"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0002274"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0002494"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0002494","FYPO:0002274","FYPO:0005447","FYPO:0001985","FYPO:0000002"],"is_obsolete":false,"name":"increased histone H4-K12 acetylation at centromere central core during vegetative growth","synonyms":[{"name":"increased histone H4-K12 acetylation at centromere central core during mitotic cell cycle","type":"related"},{"name":"increased histone H4-K12 acetylation at centromeric central core during vegetative growth","type":"exact"},{"name":"increased histone H4K12 acetylation at centromere central core during vegetative growth","type":"exact"}],"termid":"FYPO:0007314"}


id: PATO:0001458
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A sensitivity of a process quality inhering in a bearer by virtue of the bearer's unfolding in a location with or without oxygen.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitivity of a process","termid":"PATO:0001457"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"sensitivity of a process to oxygen","synonyms":[{"name":"sensitivity of occurrent to oxygen","type":"exact"}],"termid":"PATO:0001458"}


id: GO:0006366
data:
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promoter","type":"exact"}],"termid":"GO:0006366","terms_by_termid":{"GO:0000122":null,"GO:0001174":null,"GO:0001193":null,"GO:0006357":null,"GO:0006366":null,"GO:0006367":null,"GO:0006368":null,"GO:0006369":null,"GO:0030847":null,"GO:0032968":null,"GO:0042789":null,"GO:0045815":null,"GO:0045899":null,"GO:0045944":null,"GO:0051123":null,"GO:0060261":null,"GO:0060963":null,"GO:0140673":null}}


id: MONDO:1012952
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Amelogenesis imperfecta that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"mouth disorder, non-human animal","termid":"MONDO:1011333"},{"relation_name":"is_a","term_name":"musculoskeletal system disorder, non-human animal","termid":"MONDO:1011335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"amelogenesis imperfecta, non-human animal","termid":"MONDO:1012952","xrefs":{"Monarch":{"xref_id":"1012952"}}}


id: GO:2000273
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that activates or increases the frequency, rate or extent of signaling receptor activity.","definition_xrefs":["GOC:obol"],"gene_count":0,"genotype_count":0,"name":"obsolete positive regulation of signaling receptor activity (obsolete GO:2000273)","synonyms":[{"name":"positive regulation of signalling receptor activity","type":"exact"}],"termid":"GO:2000273"}


id: PBO:0065733
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PWWP domain containing 4","termid":"PBO:0065733"}


id: GO:0102937
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: UDP-alpha-D-glucose + 16-alpha-hydroxygypsogenate = 16-alpha-hydroxygypsogenate-28-beta-D-glucoside + UDP.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hexosyltransferase activity","termid":"GO:0016758"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016757"}],"interesting_parent_ids":["GO:0016757","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"16-alpha-hydroxygypsogenate-UDP-glucosyltransferase activity","secondary_identifiers":["MetaCyc:RXN-9014"],"termid":"GO:0102937"}


id: SO:0000026
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"RNA_motif","termid":"SO:0000715"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA_junction_loop","synonyms":[{"name":"RNA junction loop","type":"exact"}],"termid":"SO:0000026"}


id: PBO:0051103
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-14 (pseudogene)","termid":"PBO:0051103"}


id: MONDO:0016836
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"16p13.11 microdeletion syndrome is a recently described syndrome characterized by developmental delay, microcephaly, epilepsy, short stature, facial dysmorphism and behavioral problems.","definition_xrefs":["Orphanet:261236"],"direct_ancestors":[{"relation_name":"is_a","term_name":"partial deletion of the short arm of chromosome 16","termid":"MONDO:0016894"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"16p13.11 microdeletion syndrome","secondary_identifiers":["MEDGEN:930265","DECIPHER:79","GARD:20774","SCTID:719577000","UMLS:C4304596"],"synonyms":[{"name":"16p13.11 recurrent microdeletion (neurocognitive disorder susceptibility locus)","type":"exact"},{"name":"Del(16)(p13.11)","type":"exact"},{"name":"monosomy 16p13.11","type":"exact"}],"termid":"MONDO:0016836","xrefs":{"Monarch":{"xref_id":"0016836"}}}


id: PBO:0051102
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 1-12 (pseudogene)","termid":"PBO:0051102"}


id: GO:0008572
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + H2O = ADP + phosphate. The hydrolysis of ATP required for the ATP-dependent assembly of nucleosome cores, in decondensation of sperm chromatin and in other histone-involving processes.","definition_xrefs":["EC:3.6.4.11"],"gene_count":0,"genotype_count":0,"name":"obsolete nucleoplasmin ATPase activity (obsolete GO:0008572)","synonyms":[{"name":"nucleoplasmin ATPase activity","type":"exact"}],"termid":"GO:0008572"}


id: PBO:0052723
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"keratin 18 pseudogene 15","termid":"PBO:0052723"}


id: GO:0016713
data:
  {"annotated_genes":["SJAG_04000"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[61482],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0106364"}]},"cv_name":"molecular_function","definition":"Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from reduced iron-sulfur protein and one other donor, and one atom of oxygen is incorporated into one donor.","definition_xrefs":["EC:1.14.15.-"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monooxygenase activity","termid":"GO:0004497"},{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen","termid":"GO:0016705"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulfur protein as one donor, and incorporation of one atom of oxygen","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced iron-sulphur protein as one donor, and incorporation of one atom of oxygen","type":"exact"}],"termid":"GO:0016713","terms_by_termid":{"GO:0106364":null}}


id: PR:O74174
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A V-type proton ATPase subunit G 2 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["OMA:SCHPO04113","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type proton ATPase subunit G (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1289.05c","secondary_identifiers":["UniProtKB:O74174"],"synonyms":[{"name":"Spom972h-ATP6V1G2","type":"exact"},{"name":"V-ATPase subunit G (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"vacuolar proton pump subunit G (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74174"}


id: PBO:0049639
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H3 histone pseudogene 42","termid":"PBO:0049639"}


id: SO:0001438
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A non-polar, hydorophobic amino acid encoded by the codons ATH (ATT, ATC and ATA).","direct_ancestors":[{"relation_name":"is_a","term_name":"amino_acid","termid":"SO:0001237"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"isoleucine","synonyms":[{"name":"I","type":"exact"},{"name":"Ile","type":"exact"}],"termid":"SO:0001438"}


id: PBO:0070682
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L7 pseudogene 53","termid":"PBO:0070682"}


id: GO:0036339
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The attachment of a lymphocyte to an endothelial cell of a high endothelial venule (HEV) via adhesion molecules. A HEV cell is an endothelial cell that is cuboidal, expresses leukocyte-specific receptors, and allows for passage of lymphocytes into bloodstream.","definition_xrefs":["PMID:19339990","PMID:7679710","Wikipedia:High_endothelial_venules","CL:0000542","GOC:nhn","CL:0002652"],"direct_ancestors":[{"relation_name":"is_a","term_name":"leukocyte adhesion to vascular endothelial cell","termid":"GO:0061756"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0007155"}],"interesting_parent_ids":["GO:0007155","GO:0008150"],"is_obsolete":false,"name":"lymphocyte adhesion to endothelial cell of high endothelial venule","synonyms":[{"name":"lymphocyte adhesion to HEV cell","type":"exact"},{"name":"lymphocyte adhesion to high endothelial venule","type":"exact"}],"termid":"GO:0036339"}


id: GO:0050208
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetyl-CoA + an alpha-2,8-linked polymer of sialic acid = CoA + polysialic acid acetylated at O-7 or O-9.","definition_xrefs":["EC:2.3.1.136","MetaCyc:POLYSIALIC-ACID-O-ACETYLTRANSFERASE-RXN"],"direct_ancestors":[{"relation_name":"is_a","term_name":"O-acetyltransferase activity","termid":"GO:0016413"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016746"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016740"}],"interesting_parent_ids":["GO:0016746","GO:0016740","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"polysialic-acid O-acetyltransferase activity","secondary_identifiers":["RHEA:11604"],"synonyms":[{"name":"acetyl-CoA:polysialic-acid O-acetyltransferase activity","type":"exact"}],"termid":"GO:0050208"}


id: GO:0102180
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol + NADH + O2 + H+ = 4alpha-formyl-stigmasta-7,24(241)-dien-3beta-ol + NAD + 2 H2O.","definition_xrefs":["RHEA:59036","GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen","termid":"GO:0016709"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"}],"interesting_parent_ids":["GO:0003824","GO:0016491","GO:0003674"],"is_obsolete":false,"name":"4alpha-hydroxymethyl-stigmasta-7,24(241)-dien-3beta-ol-methyl oxidase activity","secondary_identifiers":["MetaCyc:RXN-11936"],"termid":"GO:0102180"}


id: MOD:00499
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"modification from Unimod Chemical derivative","definition_xrefs":["Unimod:128#C","PubMed:3578767","PubMed:3311742"],"direct_ancestors":[{"relation_name":"is_a","term_name":"reagent derivatized residue","termid":"MOD:00848"},{"relation_name":"is_a","term_name":"modified L-cysteine residue","termid":"MOD:00905"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"5-iodoacetamidofluorescein","synonyms":[{"name":"5-Iodoacetamidofluorescein (Molecular Probe, Eugene, OR)","type":"related"},{"name":"Fluorescein","type":"related"}],"termid":"MOD:00499"}


id: FYPO:0007372
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of chlorpromazine than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002682","FYPO:0005447","FYPO:0000139"],"is_obsolete":false,"name":"resistance to chlorpromazine","synonyms":[{"name":"resistance to chlorpromazine during mitotic cell cycle","type":"related"},{"name":"resistance to chlorpromazine during vegetative growth","type":"exact"},{"name":"resistant to chlorpromazine","type":"exact"}],"termid":"FYPO:0007372"}


id: PBO:0077321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"transmembrane protein 59 like","termid":"PBO:0077321"}


id: MONDO:0014819
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Robinow syndrome in which the cause of the disease is a mutation in the DVL3 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant Robinow syndrome","termid":"MONDO:0008389"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"autosomal dominant Robinow syndrome 3","secondary_identifiers":["DOID:0060767","GARD:18549","UMLS:C4225164","MEDGEN:907878","OMIM:616894"],"synonyms":[{"name":"DRS3","type":"exact"},{"name":"DVL3 Robinow syndrome","type":"exact"},{"name":"Robinow syndrome caused by mutation in DVL3","type":"exact"},{"name":"Robinow syndrome, autosomal dominant 3","type":"exact"},{"name":"Robinow syndrome, autosomal dominant type 3","type":"exact"},{"name":"autosomal dominant Robinow syndrome type 3","type":"exact"}],"termid":"MONDO:0014819","xrefs":{"Monarch":{"xref_id":"0014819"}}}


id: GO:0006269
data:
  {"annotated_genes":["SJAG_03722","SJAG_01698","SJAG_04994","SJAG_02172","SJAG_02627"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[72348,77200,117587,118311,119403],"is_not":false,"summary":null,"term":"GO:0006269"}]},"cv_name":"biological_process","definition":"The synthesis of a short nucleotide polymer using one strand of unwound DNA as a template. The product is usually a RNA molecule between 4-15 nucleotides long that provides a free 3'-OH that can be extended by DNA-directed DNA polymerases. In certain conditions, for example in response to DNA damage, some primases synthesize a DNA primer.","definition_xrefs":["PMID:11395402","PMID:38203225","PMID:38492718"],"direct_ancestors":[{"relation_name":"is_a","term_name":"RNA biosynthetic process","termid":"GO:0032774"},{"relation_name":"part_of","term_name":"DNA-templated DNA replication","termid":"GO:0006261"}],"gene_count":5,"genes_by_uniquename":{"SJAG_01698":null,"SJAG_02172":null,"SJAG_02627":null,"SJAG_03722":null,"SJAG_04994":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0006259"},{"rel_name":"part_of","termid":"GO:0006260"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006259","GO:0008150","GO:0006260"],"is_obsolete":false,"name":"DNA replication, synthesis of primer","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"DNA priming","type":"narrow"},{"name":"DNA replication, synthesis of DNA primer","type":"narrow"},{"name":"DNA replication, synthesis of RNA primer","type":"narrow"},{"name":"replication priming","type":"related"}],"termid":"GO:0006269","terms_by_termid":{"GO:0006269":null}}


id: PBO:0082146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Acyl-CoA:sterol acyltransferase; endoplasmic reticulum enzyme that contributes the major sterol esterification activity in the absence of oxygen; ARE1 has a paralog, ARE2, that arose from the whole genome duplication","termid":"PBO:0082146"}


id: SO:0000251
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","gene_count":0,"genotype_count":0,"name":"OBSOLETE SO:0000251 eight_cutter_restriction_site (obsolete SO:0000251)","synonyms":[{"name":"8-cutter_restriction_site","type":"related"},{"name":"eight-cutter_restriction_site","type":"related"}],"termid":"SO:0000251"}


id: PBO:0085656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in mitochondrion organization; functions with Nca2p to regulate mitochondrial expression of subunits 6 (Atp6p) and 8 (Atp8p) of the Fo-F1 ATP synthase; SWAT-GFP, seamless-GFP and mCherry fusion proteins localize to the vacuole; member of the SUN family; expression induced in cells treated with the mycotoxin patulin; NCA3 has a paralog, UTH1, that arose from the whole genome duplication","termid":"PBO:0085656"}


id: GO:0035955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that stops, prevents or reduces the frequency, rate or extent of dipeptide transport by stopping, preventing or reducing the frequency, rate or extent of transcription from an RNA polymerase II promoter.","definition_xrefs":["PMID:10850718","PMID:9427760","GOC:dgf","PMID:17005992"],"gene_count":0,"genotype_count":0,"name":"obsolete negative regulation of dipeptide transport by negative regulation of transcription from RNA polymerase II promoter (obsolete GO:0035955)","synonyms":[{"name":"negative regulation of dipeptide transport by down regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by down-regulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by downregulation of transcription from RNA polymerase II promoter","type":"exact"},{"name":"negative regulation of dipeptide transport by inhibition of transcription from RNA polymerase II promoter","type":"narrow"},{"name":"negative regulation of dipeptide transport by negative regulation of transcription from Pol II promoter","type":"exact"}],"termid":"GO:0035955"}


id: MONDO:1012806
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any progressive retinal atrophy that occurs in dogs due to a mutation in the NECAP1 gene.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease, non-human animal","termid":"MONDO:1011321"},{"relation_name":"is_a","term_name":"progressive retinal atrophy, dog","termid":"MONDO:1012226"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"progressive retinal atrophy, NECAP1-related, dog","secondary_identifiers":["OMIA:002198-9615"],"termid":"MONDO:1012806","xrefs":{"Monarch":{"xref_id":"1012806"}}}


id: PBO:0048593
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"growth hormone 2","termid":"PBO:0048593"}


id: SO:0000992
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A region of DNA that has been inserted into the bacterial genome using a bacterial artificial chromosome.","direct_ancestors":[{"relation_name":"derives_from","term_name":"BAC","termid":"SO:0000153"},{"relation_name":"is_a","term_name":"cloned_genomic_insert","termid":"SO:0000914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BAC_cloned_genomic_insert","synonyms":[{"name":"BAC cloned genomic insert","type":"exact"}],"termid":"SO:0000992"}


id: MONDO:0020251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete rare strabismus and restriction syndrome (obsolete MONDO:0020251)","secondary_identifiers":["Orphanet:98681"],"termid":"MONDO:0020251","xrefs":{"Monarch":{"xref_id":"0020251"}}}


id: GO:0008645
data:
  {"annotated_genes":["SJAG_03820","SJAG_00057","SJAG_02719","SJAG_03608"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[66306,105001],"is_not":false,"summary":null,"term":"GO:0008645"},{"annotations":[116234,112697],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0046323"},{"annotations":[119278],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0098708"},{"annotations":[112698],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140425"}]},"cv_name":"biological_process","definition":"The process in which hexose is transported across a membrane. Hexoses are aldoses with a chain of six carbon atoms in the molecule.","definition_xrefs":["GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"monosaccharide transmembrane transport","termid":"GO:0015749"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00057":null,"SJAG_02719":null,"SJAG_03608":null,"SJAG_03820":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0055085","GO:0051179","GO:0006810"],"is_obsolete":false,"name":"hexose transmembrane transport","references_by_uniquename":{"GO_REF:0000107":null,"GO_REF:0000108":null},"secondary_identifiers":["GO:0035428","GO:0008646","GO:0008647","Reactome:R-HSA-189200"],"synonyms":[{"name":"hexose membrane transport","type":"related"},{"name":"hexose transport","type":"related"},{"name":"high-affinity hexose transport","type":"narrow"},{"name":"low-affinity hexose transport","type":"narrow"}],"termid":"GO:0008645","terms_by_termid":{"GO:0008645":null,"GO:0046323":null,"GO:0098708":null,"GO:0140425":null}}


id: PBO:0087697
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Subunit of the origin recognition complex (ORC); ORC directs DNA replication by binding to replication origins and is also involved in transcriptional silencing; ORC4 has a paralog, RIF2, that arose from the whole genome duplication","termid":"PBO:0087697"}


id: GO:0048327
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into an axial mesoderm cell in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesodermal cell fate specification","termid":"GO:0007501"},{"relation_name":"part_of","term_name":"axial mesodermal cell fate commitment","termid":"GO:0048322"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"axial mesodermal cell fate specification","synonyms":[{"name":"axial mesoderm cell fate specification","type":"exact"}],"termid":"GO:0048327"}


id: GO:0075231
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of spore movement on or near its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:pamgo_curators"],"gene_count":0,"genotype_count":0,"name":"obsolete modulation of spore movement on or near host (obsolete GO:0075231)","termid":"GO:0075231"}


id: MONDO:0000805
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A allergic disease involving a snail food product.","definition_xrefs":["MONDO:patterns/allergy"],"gene_count":0,"genotype_count":0,"name":"obsolete snail allergy (obsolete MONDO:0000805)","secondary_identifiers":["DOID:0060530"],"synonyms":[{"name":"allergy of snail food product","type":"exact"},{"name":"snail food product allergic disease","type":"exact"}],"termid":"MONDO:0000805","xrefs":{"Monarch":{"xref_id":"0000805"}}}


id: PBO:0029770
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_microcolony,_elongated_tapered_cells_(obsolete_FYPO:0002469)","termid":"PBO:0029770"}


id: PBO:0014611
data:
  {"annotation_feature_type":"gene","cv_name":"complementation","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"not functionally complemented by S. cerevisiae SSD1","termid":"PBO:0014611"}


id: PBO:0045152
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNAH8 divergent transcript","termid":"PBO:0045152"}


id: PBO:0005818
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"V-type ATPase V1 subunit D (predicted)","termid":"PBO:0005818"}


id: PBO:0042648
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"chromodomain Y-linked 23 pseudogene","termid":"PBO:0042648"}


id: GO:0055116
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The dormancy process that results in entry into reproductive diapause. Reproductive diapause is a form of diapause where the organism itself will remain fully active, including feeding and other routine activities, but the reproductive organs experience a tissue-specific reduction in metabolism, with characteristic triggering and releasing stimuli.","definition_xrefs":["GOC:ds","GOC:jid","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"entry into diapause","termid":"GO:0055115"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"entry into reproductive diapause","termid":"GO:0055116"}


id: FYPO:0002615
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the localization of a protein to the pre-autophagosomal structure is decreased.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal protein localization to pre-autophagosomal structure","termid":"FYPO:0002614"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000138","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased protein localization to pre-autophagosomal structure","synonyms":[{"name":"decreased protein localisation to pre-autophagosomal structure","type":"exact"},{"name":"decreased protein localization to PAS","type":"exact"},{"name":"decreased protein localization to pre-autophagosomal structure during mitotic cell cycle","type":"related"},{"name":"decreased protein localization to pre-autophagosomal structure during vegetative growth","type":"exact"},{"name":"reduced protein localization to pre-autophagosomal structure","type":"exact"}],"termid":"FYPO:0002615"}


id: MONDO:0032675
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"congenital myasthenic syndrome","termid":"MONDO:0018940"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"myasthenic syndrome, congenital, 25, presynaptic","secondary_identifiers":["OMIM:618323","UMLS:C5193027","MEDGEN:1683288","GARD:16341"],"synonyms":[{"name":"CMS25","type":"related"},{"name":"MYASTHENIC SYNDROME, CONGENITAL, 25, PRESYNAPTIC","type":"related"},{"name":"myasthenic syndrome, congenital, 25","type":"exact"}],"termid":"MONDO:0032675","xrefs":{"Monarch":{"xref_id":"0032675"}}}


id: MONDO:0009770
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any 3MC syndrome in which the cause of the disease is a mutation in the MASP1 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"3MC syndrome","termid":"MONDO:0017398"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"3MC syndrome 1","secondary_identifiers":["MEDGEN:167100","Orphanet:2506","UMLS:C0796059","EFO:1001978","DOID:0060575","OMIM:257920","GARD:4049"],"synonyms":[{"name":"3MC syndrome 1","type":"exact"},{"name":"3MC syndrome caused by mutation in MASP1","type":"exact"},{"name":"3MC syndrome type 1","type":"exact"},{"name":"3MC1","type":"related"},{"name":"3Mc syndrome type 1","type":"exact"},{"name":"MASP1 3MC syndrome","type":"exact"},{"name":"Michels syndrome","type":"related"},{"name":"Michels syndrome, formerly","type":"related"},{"name":"craniosynostosis with 51D anomalies","type":"related"},{"name":"oculopalatoskeletal syndrome","type":"related"}],"termid":"MONDO:0009770","xrefs":{"Monarch":{"xref_id":"0009770"}}}


id: PBO:0082870
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Coronin; cortical actin cytoskeletal component that associates with the Arp2p/Arp3p complex to regulate its activity; plays a role in regulation of actin patch assembly","termid":"PBO:0082870"}


id: GO:0018271
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: ATP + biotin + protein = AMP + diphosphate + biotin-protein.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete biotin-protein ligase activity (obsolete GO:0018271)","secondary_identifiers":["Reactome:R-HSA-9035988","Reactome:R-HSA-9035990","Reactome:R-HSA-3323184","Reactome:R-HSA-9035987","Reactome:R-HSA-2993802","Reactome:R-HSA-2993814","Reactome:R-HSA-4167511","Reactome:R-HSA-2993447","Reactome:R-HSA-2993799"],"synonyms":[{"name":"biotin-apoprotein ligase activity","type":"exact"}],"termid":"GO:0018271"}


id: PBO:0071866
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RPS3A pseudogene 4","termid":"PBO:0071866"}


id: PBO:0071169
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 8","termid":"PBO:0071169"}


id: MONDO:0015529
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Paroxysmal hemicrania (PH) is a primary headache disorder characterized by multiple attacks of unilateral pain that occur in association with cranial autonomic symptoms. The hallmarks of this syndrome are the relative shortness of the attacks and the complete response to indomethacin therapy.","definition_xrefs":["Orphanet:157835"],"direct_ancestors":[{"relation_name":"is_a","term_name":"trigeminal autonomic cephalalgia","termid":"MONDO:0015530"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"paroxysmal Hemicrania","secondary_identifiers":["MEDGEN:235603","icd11.foundation:959737563","ICD9:339.03","MESH:D051302","GARD:10794","SCTID:443094001","UMLS:C1399352","EFO:1001822","MedDRA:10019461"],"termid":"MONDO:0015529","xrefs":{"Monarch":{"xref_id":"0015529"}}}


id: PBO:0070071
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U6atac small nuclear 28, pseudogene","termid":"PBO:0070071"}


id: PBO:0064200
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"placenta associated 8","termid":"PBO:0064200"}


id: FYECO:0000303
data:
  {"annotation_feature_type":"gene","cv_name":"fission_yeast_phenotype_condition","definition":"An experimental condition in which menadione was added to the medium or assay buffer in excess compared to standard medium or assay buffers.","definition_xrefs":["PomBase:al"],"direct_ancestors":[{"relation_name":"is_a","term_name":"grouping excess","termid":"FYECO:0000109"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"+ menadione","termid":"FYECO:0000303"}


id: GO:0052623
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: delta2-isopentenyl diphosphate + ADP = diphosphate + N6-(delta(2)-isopentenyl)adenosine 5'-diphosphate.","definition_xrefs":["MetaCyc:RXN-4305"],"gene_count":0,"genotype_count":0,"name":"obsolete ADP dimethylallyltransferase activity (obsolete GO:0052623)","synonyms":[{"name":"2-isopentenyl-diphosphate:ADP 2-isopentenyltransferase activity","type":"exact"},{"name":"ADP isopentenyltransferase activity","type":"exact"}],"termid":"GO:0052623"}


id: PR:000037299
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein complex composed of two subunits of Schizosaccharomyces pombe serine/threonine-protein kinase cds1 primed by rad3-rad26 complex.","definition_xrefs":["PMID:19357077"],"direct_ancestors":[{"relation_name":"is_a","term_name":"serine/threonine-protein kinase cds1 (Schizosaccharomyces pombe)","termid":"PR:000030002"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cds1/Phos(T11) dimer","pombase_gene_id":"SPCC18B5.11c","synonyms":[{"name":"PomBase_original_PRO_term_name: serine/threonine-protein kinase cds1 homodimer, phosphorylated 1 (Schizosaccharomyces pombe)","type":"exact"},{"name":"cds1/Phos(T11) dimer","type":"exact"}],"termid":"PR:000037299"}


id: PBO:0035699
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abolished_protein_localization_to_microtubule_plus-end_during_mitotic_interphase","termid":"PBO:0035699"}


id: GO:0062245
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"The inner of the two endoplasmic reticulum-derived lipid bilayer membranes that bound a double membrane vesicle viral factory.","definition_xrefs":["PMID:22440839"],"direct_ancestors":[{"relation_name":"is_a","term_name":"double membrane vesicle viral factory membrane","termid":"GO:0062242"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"double membrane vesicle viral factory inner membrane","synonyms":[{"name":"inner membrane of double membrane vesicle viral factory","type":"exact"}],"termid":"GO:0062245"}


id: GO:2000028
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of photoperiodism, flowering.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of response to stimulus","termid":"GO:0048583"},{"relation_name":"regulates","term_name":"photoperiodism, flowering","termid":"GO:0048573"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of photoperiodism, flowering","synonyms":[{"name":"regulation of photoperiodic control of flowering time","type":"exact"},{"name":"regulation of photoperiodic control of inflorescence development","type":"exact"},{"name":"regulation of response to day length, flowering","type":"exact"},{"name":"regulation of response to night length, flowering","type":"exact"},{"name":"regulation of response to photoperiod, flowering","type":"exact"}],"termid":"GO:2000028"}


id: PBO:0055751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lncRNA divergent activator of TBXT","termid":"PBO:0055751"}


id: MONDO:0015932
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. A non-syndromic urogenital tract malformation that involves the female organism.","definition_xrefs":["MONDO:design_pattern"],"gene_count":0,"genotype_count":0,"name":"obsolete non-syndromic urogenital tract malformation of female (obsolete MONDO:0015932)","secondary_identifiers":["Orphanet:182117"],"synonyms":[{"name":"female organism non-syndromic urogenital tract malformation","type":"exact"},{"name":"isolated urogenital tract malformation of female","type":"related"},{"name":"non-syndromic urogenital tract malformation of female organism","type":"exact"},{"name":"nonsyndromic urogenital tract malformation of female","type":"exact"}],"termid":"MONDO:0015932","xrefs":{"Monarch":{"xref_id":"0015932"}}}


id: MONDO:1011736
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"dermatosis vegetans, non-human animal","secondary_identifiers":["OMIA:000271"],"termid":"MONDO:1011736","xrefs":{"Monarch":{"xref_id":"1011736"}}}


id: PBO:0062310
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 5 subfamily T member 2","termid":"PBO:0062310"}


id: GO:0030537
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Behavior in a larval form of an organism, an immature organism that must undergo metamorphosis to assume adult characteristics.","definition_xrefs":["ISBN:0877797099","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"behavior","termid":"GO:0007610"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"larval behavior","secondary_identifiers":["GO:0017037"],"synonyms":[{"name":"larval behaviour","type":"exact"}],"termid":"GO:0030537"}


id: PBO:0044143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CTBP2 pseudogene 9","termid":"PBO:0044143"}


id: PBO:0006175
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-has_input","termid":"PBO:0006175"}


id: PBO:0035999
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_Cutin-1","termid":"PBO:0035999"}


id: PBO:0053279
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"leukocyte immunoglobulin like receptor B5","termid":"PBO:0053279"}


id: PBO:0026739
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-sensitive_to_ethionine","termid":"PBO:0026739"}


id: PBO:0073055
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SCYL2 pseudogene 1","termid":"PBO:0073055"}


id: PBO:0081523
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zinc finger protein 432","termid":"PBO:0081523"}


id: PBO:0088170
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WW domain containing protein of unknown function; binds to Mca1p, a caspase-related protease that regulates H2O2-induced apoptosis; overexpression causes G1 phase growth arrest and clonal death that is suppressed by overexpression of MCA1","termid":"PBO:0088170"}


id: GO:0042798
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Covalent attachment of the ubiquitin-like protein NEDD8 (or equivalent protein) to another protein, as a part of NEDD8-dependant protein catabolism.","definition_xrefs":["GOC:jl"],"gene_count":0,"genotype_count":0,"name":"obsolete protein neddylation during NEDD8 class-dependent protein catabolic process (obsolete GO:0042798)","synonyms":[{"name":"protein neddylation during NEDD8 class-dependent protein breakdown","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein catabolism","type":"exact"},{"name":"protein neddylation during NEDD8 class-dependent protein degradation","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolic process","type":"exact"},{"name":"protein neddylation during RUB1-dependent protein catabolism","type":"exact"}],"termid":"GO:0042798"}


id: PBO:0055104
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2522","termid":"PBO:0055104"}


id: GO:0051269
data:
  {"annotated_genes":["SJAG_01869"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[93830],"is_not":false,"summary":null,"term":"GO:0051269"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: alpha-ketoester + H+ + NADPH = (R)-hydroxy ester + NADP+.","definition_xrefs":["PMID:15564669","RHEA:80767"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor","termid":"GO:0016620"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01869":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0016491","GO:0003824"],"is_obsolete":false,"name":"alpha-ketoester reductase (NADPH) activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0051269","terms_by_termid":{"GO:0051269":null}}


id: PBO:0071825
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S2 pseudogene 20","termid":"PBO:0071825"}


id: PBO:0028258
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_histone_H3K9me_binding","termid":"PBO:0028258"}


id: MONDO:0017371
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"OBSOLETE. Rare head and neck neoplasia.","definition_xrefs":["MONDO:patterns/rare"],"gene_count":0,"genotype_count":0,"name":"obsolete rare head and neck tumor (obsolete MONDO:0017371)","secondary_identifiers":["Orphanet:290849"],"synonyms":[{"name":"rare head and neck neoplasia","type":"exact"},{"name":"rare head and neck neoplasm","type":"exact"}],"termid":"MONDO:0017371","xrefs":{"Monarch":{"xref_id":"0017371"}}}


id: GO:0001909
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed killing of a target cell by a leukocyte.","definition_xrefs":["GOC:add","PMID:11911826","ISBN:0781735149","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell killing","termid":"GO:0001906"},{"relation_name":"is_a","term_name":"leukocyte mediated immunity","termid":"GO:0002443"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"leukocyte mediated cytotoxicity","synonyms":[{"name":"immune cell mediated cell death","type":"exact"},{"name":"immune cell mediated cell killing","type":"exact"},{"name":"immune cell mediated cytotoxicity","type":"exact"},{"name":"leucocyte mediated cytotoxicity","type":"exact"}],"termid":"GO:0001909"}


id: GO:0019436
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of sophorosyloxydocosanoate, 13-sophorosyloxydocosanoate 6',6''-diacetate.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"glycolipid catabolic process","termid":"GO:0019377"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"sophorosyloxydocosanoate catabolic process","secondary_identifiers":["MetaCyc:SOPHOROSYLOXYDOCOSANOATE-DEG-PWY"],"synonyms":[{"name":"sophorosyloxydocosanoate breakdown","type":"exact"},{"name":"sophorosyloxydocosanoate catabolism","type":"exact"},{"name":"sophorosyloxydocosanoate degradation","type":"exact"}],"termid":"GO:0019436"}


id: PBO:0074527
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small NF90 (ILF3) associated RNA C3","termid":"PBO:0074527"}


id: PATO:0000042
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000042 relative distance (obsolete PATO:0000042)","termid":"PATO:0000042"}


id: PBO:0079895
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ubiquinol-cytochrome c reductase complex assembly factor 4","termid":"PBO:0079895"}


id: MONDO:0000033
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete frontonasal dysplasia (obsolete MONDO:0000033)","termid":"MONDO:0000033","xrefs":{"Monarch":{"xref_id":"0000033"}}}


id: GO:0015379
data:
  {"annotated_genes":["SJAG_03401"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[75366],"is_not":false,"summary":null,"term":"GO:0015379"}]},"cv_name":"molecular_function","definition":"Enables the transfer of a solute or solutes from one side of a membrane to the other according to the reaction: K+(out) + Cl-(out) = K+(in) + Cl-(in).","definition_xrefs":["TC:2.A.30.1.5"],"direct_ancestors":[{"relation_name":"is_a","term_name":"potassium ion transmembrane transporter activity","termid":"GO:0015079"},{"relation_name":"is_a","term_name":"chloride:monoatomic cation symporter activity","termid":"GO:0015377"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03401":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005215"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0022857"}],"interesting_parent_ids":["GO:0022857","GO:0003674","GO:0005215"],"is_obsolete":false,"name":"potassium:chloride symporter activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["Reactome:R-HSA-5623806","GO:0022820","Reactome:R-HSA-426155","RHEA:72427"],"synonyms":[{"name":"potassium ion symporter activity","type":"broad"}],"termid":"GO:0015379","terms_by_termid":{"GO:0015379":null}}


id: GO:2001135
data:
  {"annotated_genes":["SJAG_04509"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89905],"is_not":false,"summary":null,"term":"GO:2001135"}]},"cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of endocytic recycling.","definition_xrefs":["GOC:obol"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of intracellular transport","termid":"GO:0032386"},{"relation_name":"is_a","term_name":"regulation of vesicle-mediated transport","termid":"GO:0060627"},{"relation_name":"regulates","term_name":"endocytic recycling","termid":"GO:0032456"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04509":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0006810"},{"rel_name":"regulates","termid":"GO:0016192"}],"interesting_parent_ids":["GO:0016192","GO:0008150","GO:0006810"],"is_obsolete":false,"name":"regulation of endocytic recycling","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"regulation of retrograde transport of endocytic vesicles","type":"related"}],"termid":"GO:2001135","terms_by_termid":{"GO:2001135":null}}


id: GO:0050183
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 1-acyl-2-(9Z)-octadecenoyl-sn-glycero-3-phosphocholine + 2 Fe(II)-[cytochrome b5] + 2 H+ + O2 = 1-acyl-2-[(R)-12-hydroxyoleoyl]-sn-glycero-3-phosphocholine + 2 Fe(III)-[cytochrome b5] + H2O.","definition_xrefs":["RHEA:46360"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, another compound as one donor, and incorporation of one atom of oxygen","termid":"GO:0016716"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"phosphatidylcholine 12-monooxygenase activity","secondary_identifiers":["EC:1.14.18.4","KEGG_REACTION:R03476","MetaCyc:PHOSPHATIDYLCHOLINE-12-MONOOXYGENASE-RXN"],"synonyms":[{"name":"1-acyl-2-oleoyl-sn-glycero-3-phosphocholine,NADH:oxygen oxidoreductase (12-hydroxylating)","type":"related"},{"name":"oleate D12-hydroxylase activity","type":"exact"},{"name":"oleate Delta(12)-hydroxylase activity","type":"related"},{"name":"oleate delta12-hydroxylase activity","type":"related"},{"name":"oleate delta12-monooxygenase activity","type":"related"},{"name":"ricinoleic acid synthase activity","type":"related"}],"termid":"GO:0050183"}


id: GO:1900065
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of ethanol catabolic process.","definition_xrefs":["PMID:7760841","GOC:TermGenie","PMID:10608811"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of alcohol catabolic process","termid":"GO:1900419"},{"relation_name":"regulates","term_name":"ethanol catabolic process","termid":"GO:0006068"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044281"}],"interesting_parent_ids":["GO:0008150","GO:0044281"],"is_obsolete":false,"name":"regulation of ethanol catabolic process","synonyms":[{"name":"regulation of ethanol breakdown","type":"exact"},{"name":"regulation of ethanol catabolism","type":"exact"},{"name":"regulation of ethanol degradation","type":"exact"}],"termid":"GO:1900065"}


id: PBO:0067035
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 49, pseudogene","termid":"PBO:0067035"}


id: PBO:0056353
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MAP7 domain containing 2","termid":"PBO:0056353"}


id: PBO:0058888
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 10525","termid":"PBO:0058888"}


id: PBO:0070842
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L13a pseudogene 21","termid":"PBO:0070842"}


id: PBO:0025430
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Survival Motor Neuron","termid":"PBO:0025430"}


id: GO:1905560
data:
  {"annotated_genes":["SJAG_04638"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[120013],"is_not":false,"summary":null,"term":"GO:1905560"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of kinetochore assembly.","definition_xrefs":["PMID:18765790","GOC:TermGenie","GO_REF:0000058"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of kinetochore assembly","termid":"GO:0090234"},{"relation_name":"is_a","term_name":"negative regulation of organelle assembly","termid":"GO:1902116"},{"relation_name":"is_a","term_name":"negative regulation of chromosome organization","termid":"GO:2001251"},{"relation_name":"negatively_regulates","term_name":"kinetochore assembly","termid":"GO:0051382"}],"gene_count":1,"genes_by_uniquename":{"SJAG_04638":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0044085"},{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0008150","GO:0065003"],"is_obsolete":false,"name":"negative regulation of kinetochore assembly","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:1901720"],"synonyms":[{"name":"down regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"down regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"down regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"down regulation of kinetochore assembly","type":"exact"},{"name":"down regulation of kinetochore biogenesis","type":"exact"},{"name":"down regulation of kinetochore formation","type":"related"},{"name":"down-regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"down-regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"down-regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"down-regulation of kinetochore assembly","type":"exact"},{"name":"down-regulation of kinetochore formation","type":"related"},{"name":"downregulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"downregulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"downregulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"downregulation of kinetochore assembly","type":"exact"},{"name":"downregulation of kinetochore formation","type":"related"},{"name":"inhibition of centromere and kinetochore complex maturation","type":"narrow"},{"name":"inhibition of centromere/kinetochore complex maturation","type":"narrow"},{"name":"inhibition of chromosome-kinetochore attachment","type":"narrow"},{"name":"inhibition of kinetochore assembly","type":"narrow"},{"name":"inhibition of kinetochore formation","type":"related"},{"name":"negative regulation of NMS complex assembly","type":"narrow"},{"name":"negative regulation of centromere and kinetochore complex maturation","type":"narrow"},{"name":"negative regulation of centromere/kinetochore complex maturation","type":"narrow"},{"name":"negative regulation of chromosome-kinetochore attachment","type":"narrow"},{"name":"negative regulation of kinetochore formation","type":"related"}],"termid":"GO:1905560","terms_by_termid":{"GO:1905560":null}}


id: GO:0018710
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetone + ATP + CO2 + 2 H2O = acetoacetate + AMP + 4 H+ + 2 phosphate.","definition_xrefs":["EC:6.4.1.6","RHEA:18385"],"direct_ancestors":[{"relation_name":"is_a","term_name":"ligase activity, forming carbon-carbon bonds","termid":"GO:0016885"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016874"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003824","GO:0016874","GO:0003674"],"is_obsolete":false,"name":"acetone carboxylase activity","secondary_identifiers":["KEGG_REACTION:R05735","MetaCyc:6.4.1.6-RXN"],"synonyms":[{"name":"acetone:carbon-dioxide ligase (AMP-forming)","type":"related"}],"termid":"GO:0018710"}


id: GO:0075043
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which melanin is produced in the appressorium of the symbiont. Melanization of the appressorium increases turgor pressure in the appressorium.","definition_xrefs":["Wikipedia:Appressorium","GOC:pamgo_curators","PMID:28165657"],"direct_ancestors":[{"relation_name":"is_a","term_name":"pigment accumulation","termid":"GO:0043476"},{"relation_name":"part_of","term_name":"appressorium maturation","termid":"GO:0075035"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"melanization of appressorium wall","synonyms":[{"name":"maintenance of turgor in appressorium by melanization","type":"related"},{"name":"melanization of appressorium to maintain turgor pressure","type":"exact"}],"termid":"GO:0075043"}


id: PBO:0064215
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"PLCB1 intronic transcript 1","termid":"PBO:0064215"}


id: PBO:0090482
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histone deacetylase, Sirtuin family, NAD-dependent Hst4","termid":"PBO:0090482"}


id: GO:0031727
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a CCR2 chemokine receptor.","definition_xrefs":["GOC:mah","GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"CCR chemokine receptor binding","termid":"GO:0048020"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488"],"is_obsolete":false,"name":"CCR2 chemokine receptor binding","synonyms":[{"name":"CCR2 chemokine receptor ligand","type":"narrow"},{"name":"monocyte chemoattractant protein 1 receptor binding","type":"exact"}],"termid":"GO:0031727"}


id: PBO:0059226
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MROH7-TTC4 readthrough (NMD candidate)","termid":"PBO:0059226"}


id: PBO:0055391
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 2821","termid":"PBO:0055391"}


id: PBO:0074084
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 26 member 1","termid":"PBO:0074084"}


id: GO:0002617
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate, or extent of macrophage antigen processing and presentation.","definition_xrefs":["GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of antigen processing and presentation","termid":"GO:0002578"},{"relation_name":"is_a","term_name":"regulation of macrophage antigen processing and presentation","termid":"GO:0002616"},{"relation_name":"negatively_regulates","term_name":"macrophage antigen processing and presentation","termid":"GO:0002472"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"negative regulation of macrophage antigen processing and presentation","synonyms":[{"name":"down regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"down-regulation of macrophage antigen processing and presentation","type":"exact"},{"name":"downregulation of macrophage antigen processing and presentation","type":"exact"},{"name":"inhibition of macrophage antigen processing and presentation","type":"narrow"}],"termid":"GO:0002617"}


id: PBO:0109373
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"testis expressed transcript, Y-linked 7","termid":"PBO:0109373"}


id: PBO:0031454
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nuclear_envelope_morphology_during_vegetative_growth","termid":"PBO:0031454"}


id: PBO:0042729
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centromere protein H","termid":"PBO:0042729"}


id: MONDO:1011639
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"nervous system disorder, non-human animal","termid":"MONDO:1011336"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"generalized myoclonic epilepsy with photosensitivity, non-human animal","secondary_identifiers":["OMIA:002095"],"termid":"MONDO:1011639","xrefs":{"Monarch":{"xref_id":"1011639"}}}


id: PBO:0041201
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BUD31 homolog pseudogene 1","termid":"PBO:0041201"}


id: PBO:0064447
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"podocan","termid":"PBO:0064447"}


id: MONDO:0004495
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A cataract occurring as a sequela of myotonic dystrophy.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cataract","termid":"MONDO:0005129"},{"relation_name":"is_a","term_name":"myotonic dystrophy","termid":"MONDO:0016107"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005336"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005336","MONDO:0005328"],"is_obsolete":false,"name":"myotonic cataract","secondary_identifiers":["SCTID:64741003","MEDGEN:44565","ICD9:366.43","ICD9:359.29","NCIT:C34833","icd11.foundation:1723425593","DOID:82","UMLS:C0027128"],"termid":"MONDO:0004495","xrefs":{"Monarch":{"xref_id":"0004495"}}}


id: MONDO:0017929
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Congenital achiasma is a rare, genetic, non-syndromic cranial nerve and nuclear aplasia malformation characterized by the congenital absence of the optic chiasm, resulting from the failure of the optic nerve fibers to cross over and decussate to the contralateral hemisphere, leading to decreased vision, strabismus and congenital nystagmus in infancy.","definition_xrefs":["Orphanet:324353"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder","termid":"MONDO:0002320"},{"relation_name":"is_a","term_name":"disorder of development or morphogenesis","termid":"MONDO:0021147"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"congenital achiasma","secondary_identifiers":["GARD:21438","MEDGEN:1392790","SCTID:734031008","ICD10CM:H47.4","UMLS:C4518345"],"termid":"MONDO:0017929","xrefs":{"Monarch":{"xref_id":"0017929"}}}


id: PBO:0071249
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 90","termid":"PBO:0071249"}


id: PR:P49777
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A tigger transposable element-derived protein 4 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PRO:DNx","OMA:SCHPO03736"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ARS-binding protein 1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC1105.04c","secondary_identifiers":["UniProtKB:P49777"],"synonyms":[{"name":"Spom972h-TIGD4","type":"exact"}],"termid":"PR:P49777"}


id: GO:0035144
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of the anal fin are generated and organized. An anal fin is an unpaired medial fin on the ventral aspect near the caudal end of a fish, which provides lateral stability while swimming.","definition_xrefs":["GOC:dgh"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medial fin morphogenesis","termid":"GO:0035141"},{"relation_name":"part_of","term_name":"anal fin development","termid":"GO:0033335"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anal fin morphogenesis","termid":"GO:0035144"}


id: PBO:0056428
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MARK2 pseudogene 1","termid":"PBO:0056428"}


id: GO:0021800
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of cells in the cerebral cortex in which cells move orthogonally to the direction of radial migration and do not use radial glial cell processes as substrates for migration.","definition_xrefs":["GO_REF:0000021","GOC:jid","PMID:12626695","GOC:cls","GOC:dgh","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cerebral cortex cell migration","termid":"GO:0021795"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cerebral cortex tangential migration","termid":"GO:0021800"}


id: FYPO:0007158
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which occurrence of histone H3 binding by a gene product (usually a protein) in a mutant is decreased. The affected gene product may be encoded by the mutated gene, or by a different gene.","definition_xrefs":["PomBase:mah","PMID:31584934"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal histone binding","termid":"FYPO:0007157"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000702"},{"rel_name":"is_a","termid":"FYPO:0000652"}],"interesting_parent_ids":["FYPO:0000707","FYPO:0000652","FYPO:0000702","FYPO:0001985"],"is_obsolete":false,"name":"decreased histone H3 binding","synonyms":[{"name":"decreased protein-histone H3 interaction","type":"exact"},{"name":"reduced histone H3 binding","type":"exact"}],"termid":"FYPO:0007158"}


id: PBO:0080751
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"X-box binding protein 1 pseudogene 1","termid":"PBO:0080751"}


id: PBO:0043976
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CSAG family member 2","termid":"PBO:0043976"}


id: PBO:0058800
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 7706","termid":"PBO:0058800"}


id: PBO:0053375
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 301","termid":"PBO:0053375"}


id: PBO:0078783
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA-Asn (anticodon GTT) 8-1","termid":"PBO:0078783"}


id: GO:1990229
data:
  {"annotated_genes":["SJAG_02866","SJAG_00040","SJAG_03862","SJAG_01238","SJAG_02994","SJAG_02497","SJAG_02895","SJAG_00894","SJAG_04016","SJAG_00532","SJAG_01063","SJAG_00186","SJAG_03701","SJAG_03222","SJAG_02306","SJAG_04397"],"annotation_feature_type":"gene","cv_annotations":{"cellular_component":[{"annotations":[69452,102052],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1904564"},{"annotations":[81291,69763,73432,90972],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0097361"},{"annotations":[111723,115931,94968,105123,95195,108910,65343],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099128"},{"annotations":[119916,106785,111907,94784],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0120510"}]},"cv_name":"cellular_component","definition":"A protein complex capable of assembling an iron-sulfur (Fe-S) cluster.","definition_xrefs":["GOC:bhm","PMID:17350958"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex","termid":"GO:0032991"},{"relation_name":"part_of","term_name":"cytoplasm","termid":"GO:0005737"}],"gene_count":16,"genes_by_uniquename":{"SJAG_00040":null,"SJAG_00186":null,"SJAG_00532":null,"SJAG_00894":null,"SJAG_01063":null,"SJAG_01238":null,"SJAG_02306":null,"SJAG_02497":null,"SJAG_02866":null,"SJAG_02895":null,"SJAG_02994":null,"SJAG_03222":null,"SJAG_03701":null,"SJAG_03862":null,"SJAG_04016":null,"SJAG_04397":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0005737"},{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575","GO:0005737","GO:0032991"],"is_obsolete":false,"name":"iron-sulfur cluster assembly complex","references_by_uniquename":{"GO_REF:0000002":null,"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"synonyms":[{"name":"Fe-S cluster assembly complex","type":"narrow"},{"name":"SufBCD complex","type":"narrow"}],"termid":"GO:1990229","terms_by_termid":{"GO:0097361":null,"GO:0099128":null,"GO:0120510":null,"GO:1904564":null}}


id: GO:0150011
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which the anatomical structures of a neuron projection are generated and organized into branches.","definition_xrefs":["GOC:aruk","GOC:bc","PMID:17114044"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell morphogenesis","termid":"GO:0022604"},{"relation_name":"is_a","term_name":"regulation of cell projection organization","termid":"GO:0031344"},{"relation_name":"regulates","term_name":"neuron projection arborization","termid":"GO:0140058"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of neuron projection arborization","synonyms":[{"name":"regulation of neurite arborization","type":"exact"},{"name":"regulation of neurite branching","type":"exact"},{"name":"regulation of neuron projection branching","type":"exact"}],"termid":"GO:0150011"}


id: PBO:0062539
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 9 subfamily G member 4","termid":"PBO:0062539"}


id: PBO:0000548
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c oxidase subunit IV (predicted)","termid":"PBO:0000548"}


id: GO:0070191
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. Catalysis of the reaction: L-methionine R-oxide + thioredoxin = L-methionine + thioredoxin disulfide; can act on free oxidized methionine with specificity for the R enantiomer; does not act on oxidized methionine in peptide linkage. Thioredoxin disulfide is the oxidized form of thioredoxin.","definition_xrefs":["GOC:mcc","PMID:17535911","PMID:19049972"],"gene_count":0,"genotype_count":0,"name":"obsolete methionine-R-sulfoxide reductase activity (obsolete GO:0070191)","termid":"GO:0070191"}


id: MONDO:0003652
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Urolithiasis in which the composition of the stones is predominantly urate.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"nephrolithiasis","termid":"MONDO:0008171"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005240"}],"interesting_parent_ids":["MONDO:0005240"],"is_obsolete":false,"name":"acute urate nephropathy","secondary_identifiers":["ICD9:274.11","MEDGEN:574593","NCIT:C123037","SCTID:236496000","ICD9:583.9","DOID:580","icd11.foundation:1011901523","UMLS:C0341712"],"synonyms":[{"name":"uric acid nephrolithiasis","type":"exact"},{"name":"uric acid urolithiasis","type":"exact"}],"termid":"MONDO:0003652","xrefs":{"Monarch":{"xref_id":"0003652"}}}


id: PBO:0082528
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cell wall and vacuolar protein; required for wild-type resistance to vanadate; SVS1 has a paralog, SRL1, that arose from the whole genome duplication","termid":"PBO:0082528"}


id: MONDO:0016280
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A sarcoma involving a uterine cervix.","definition_xrefs":["MONDO:patterns/sarcoma"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cervical cancer","termid":"MONDO:0002974"},{"relation_name":"is_a","term_name":"sarcoma","termid":"MONDO:0005089"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"sarcoma of cervix uteri","secondary_identifiers":["GARD:20493","ICD10CM:C53.0","Orphanet:213797","UMLS:C5679807","MEDGEN:1842604"],"synonyms":[{"name":"cervical malignant mesenchymal tumor","type":"exact"},{"name":"cervical malignant mesenchymal tumour","type":"exact"},{"name":"cervical sarcoma","type":"exact"},{"name":"malignant mesenchymal tumor of cervix uteri","type":"exact"},{"name":"malignant mesenchymal tumour of cervix uteri","type":"exact"},{"name":"sarcoma of uterine cervix","type":"exact"},{"name":"uterine cervix sarcoma","type":"exact"}],"termid":"MONDO:0016280","xrefs":{"Monarch":{"xref_id":"0016280"}}}


id: PBO:0068536
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, U1 small nuclear 139, pseudogene","termid":"PBO:0068536"}


id: FYPO:0006311
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A molecular function phenotype in which DNA-3'-diphospho-5'-guanosine diphosphatase activity is absent.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abolished catalytic activity","termid":"FYPO:0000664"},{"relation_name":"is_a","term_name":"abnormal DNA-3'-diphospho-5'-guanosine diphosphatase activity","termid":"FYPO:0006310"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000661"},{"rel_name":"is_a","termid":"FYPO:0000707"},{"rel_name":"is_a","termid":"FYPO:0000652"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000654"}],"interesting_parent_ids":["FYPO:0000661","FYPO:0000654","FYPO:0000707","FYPO:0000652","FYPO:0001985"],"is_obsolete":false,"name":"abolished DNA-3'-diphospho-5'-guanosine diphosphatase activity","synonyms":[{"name":"DNA-3'-diphospho-5'-guanosine diphosphatase activity abolished","type":"exact"}],"termid":"FYPO:0006311"}


id: PR:Q9UTC3
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A DNA replication complex GINS protein PSF3 that is encoded in the genome of Schizosaccharomyces pombe 972h-.","definition_xrefs":["PANTHER:PTHR22768:SF0","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"DNA replication complex GINS protein psf3 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC227.16c","secondary_identifiers":["UniProtKB:Q9UTC3"],"synonyms":[{"name":"SPAC227.16c","type":"related"},{"name":"Spom972h-GINS3","type":"exact"}],"termid":"PR:Q9UTC3"}


id: MONDO:1011022
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Lissencephaly and cerebellar hypoplasia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"lissencephaly and cerebellar hypoplasia, non-human animal","termid":"MONDO:1010247"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"lissencephaly and cerebellar hypoplasia, dog","secondary_identifiers":["OMIA:001867-9615"],"termid":"MONDO:1011022","xrefs":{"Monarch":{"xref_id":"1011022"}}}


id: PBO:0070744
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L10 like","termid":"PBO:0070744"}


id: MONDO:0035660
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"GNAO1-related developmental delay-seizures-movement disorder spectrum","secondary_identifiers":["GARD:22369","MEDGEN:1830103","Orphanet:592564","ICD10CM:F84.8","UMLS:C5680303"],"synonyms":[{"name":"GNAO1-related spectrum","type":"exact"}],"termid":"MONDO:0035660","xrefs":{"Monarch":{"xref_id":"0035660"}}}


id: GO:0097149
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"A heterotetrameric protein complex playing a key role in the formation of the central spindle in mitosis. Made up of two molecules each of a mitotic kinesin (ZEN-4 in Caenorhabditis elegans or MKLP1 in mammals) and of two molecules each of a GTPase activating protein (GAP) factor (CYK-4 in Caenorhabditis elegans or MgcRacGAP in mammals).","definition_xrefs":["PMID:16236794","PMID:11782313","GOC:ans"],"direct_ancestors":[{"relation_name":"is_a","term_name":"intracellular protein-containing complex","termid":"GO:0140535"},{"relation_name":"part_of","term_name":"mitotic spindle","termid":"GO:0072686"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"},{"rel_name":"is_a","termid":"GO:0032991"},{"rel_name":"part_of","termid":"GO:0015630"},{"rel_name":"part_of","termid":"GO:0072686"}],"interesting_parent_ids":["GO:0072686","GO:0032991","GO:0005575","GO:0015630"],"is_obsolete":false,"name":"centralspindlin complex","termid":"GO:0097149"}


id: PBO:0084660
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Mitochondrial 15S rRNA-binding protein; required for intron removal of COB and COX1 pre-mRNAs; has separable roles in stabilizing mitochondrial 15S rRNA and in maturation of the COB and COX1 mRNAs; contains pentatricopeptide repeat (PPR) motifs; mutant is respiratory deficient and has defective plasma membrane electron transport","termid":"PBO:0084660"}


id: MONDO:1012903
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Waardenburg syndrome that occurs in pigs due to a mutation in the SOX10 gene created by genetic engineering or gene editing.","definition_xrefs":["MONDO:patterns/nonhuman_disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Waardenburg syndrome, non-human animal","termid":"MONDO:1011447"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Waardenburg syndrome, SOX10-related, pig","secondary_identifiers":["OMIA:002453-9823"],"termid":"MONDO:1012903","xrefs":{"Monarch":{"xref_id":"1012903"}}}


id: GO:0006955
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any immune system process that functions in the calibrated response of an organism to a potential internal or invasive threat.","definition_xrefs":["GOC:add","GO_REF:0000022"],"direct_ancestors":[{"relation_name":"is_a","term_name":"immune system process","termid":"GO:0002376"},{"relation_name":"is_a","term_name":"response to stimulus","termid":"GO:0050896"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"immune response","termid":"GO:0006955"}


id: PBO:0060252
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MYCL pseudogene 2","termid":"PBO:0060252"}


id: MONDO:0000733
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A rare developmental defect of the eye characterized by usually bilateral absence of the normal protrusion of the cornea from the sclera, the corneal curvature being the same as that of the adjacent sclera. Most patients develop hyperopia, hazy corneal limbus, and arcus lipoides at an early age. The condition may present as an autosomal dominant or an autosomal recessive form, with the latter showing more severe signs and symptoms (such as a round and opaque thickening located centrally in the cornea) and more frequent association with other ocular anomalies.","definition_xrefs":["Orphanet:53691"],"direct_ancestors":[{"relation_name":"is_a","term_name":"corneal disorder","termid":"MONDO:0000942"},{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0005328"],"is_obsolete":false,"name":"cornea plana","secondary_identifiers":["HP:0007720","GARD:16657","DOID:0060287","icd11.foundation:262157734","MEDGEN:576329","SCTID:204145006","ICD10CM:Q13.4","UMLS:C0344529","OMIMPS:121400"],"synonyms":[{"name":"congenital cornea plana","type":"exact"},{"name":"flat cornea","type":"exact"}],"termid":"MONDO:0000733","xrefs":{"Monarch":{"xref_id":"0000733"}}}


id: MONDO:0800140
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any non-severe combined immunodeficiency in which the cause of the disease is variation in the ITPKB gene.","definition_xrefs":["PMID:31987846"],"direct_ancestors":[{"relation_name":"is_a","term_name":"non-SCID combined immunodeficiency","termid":"MONDO:0018814"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"ITPKB deficiency","termid":"MONDO:0800140","xrefs":{"Monarch":{"xref_id":"0800140"}}}


id: GO:0009728
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a gibberellic acid stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:sm"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hormone stimulus","termid":"GO:0009720"},{"relation_name":"is_a","term_name":"response to gibberellin","termid":"GO:0009739"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of gibberellic acid stimulus","synonyms":[{"name":"perception of gibberellic acid stimulus","type":"related"}],"termid":"GO:0009728"}


id: GO:0055021
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of cardiac muscle growth.","definition_xrefs":["GOC:vk"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of heart growth","termid":"GO:0060420"},{"relation_name":"regulates","term_name":"cardiac muscle tissue growth","termid":"GO:0055017"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of cardiac muscle tissue growth","termid":"GO:0055021"}


id: SO:0000935
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"A CDS that is edited.","definition_xrefs":["SO:xp"],"direct_ancestors":[{"relation_name":"has_quality","term_name":"edited","termid":"SO:0000116"},{"relation_name":"is_a","term_name":"CDS","termid":"SO:0000316"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"edited_CDS","synonyms":[{"name":"edited CDS","type":"exact"}],"termid":"SO:0000935"}


id: GO:0098720
data:
  {"annotated_genes":["SJAG_01406"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103675],"is_not":false,"summary":null,"term":"GO:0098720"}]},"cv_name":"biological_process","definition":"The directed movement of succinate from outside of a cell, across the plasma membrane and into the cytosol.","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"succinate transmembrane transport","termid":"GO:0071422"},{"relation_name":"is_a","term_name":"import across plasma membrane","termid":"GO:0098739"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01406":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006810","GO:0055085","GO:0051179","GO:0008150"],"is_obsolete":false,"name":"succinate import across plasma membrane","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0097404"],"synonyms":[{"name":"succinate import into cell","type":"exact"}],"termid":"GO:0098720","terms_by_termid":{"GO:0098720":null}}


id: FYPO:0008107
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the localization of a protein to the nucleus is decreased during stationary phase.","definition_xrefs":["PMID:37128864"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein localization to nucleus","termid":"FYPO:0004455"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000138"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000002"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000138","FYPO:0005447","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein localization to nucleus during stationary phase","termid":"FYPO:0008107"}


id: GO:0008653
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways involving lipopolysaccharides, a group of related, structurally complex components of the outer membrane of Gram-negative bacteria. Lipopolysaccharides consist three covalently linked regions, lipid A, core oligosaccharide, and an O side chain. Lipid A is responsible for the toxicity of the lipopolysaccharide.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"macromolecule metabolic process","termid":"GO:0043170"},{"relation_name":"is_a","term_name":"liposaccharide metabolic process","termid":"GO:1903509"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0006629"],"is_obsolete":false,"name":"lipopolysaccharide metabolic process","synonyms":[{"name":"LPS metabolic process","type":"exact"},{"name":"lipopolysaccharide metabolism","type":"exact"}],"termid":"GO:0008653"}


id: PBO:0071240
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein L23a pseudogene 81","termid":"PBO:0071240"}


id: MONDO:0008902
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"camptodactyly-ichthyosis syndrome","secondary_identifiers":["OMIM:211965","UMLS:C1859355","MESH:C537976","MEDGEN:347130"],"synonyms":[{"name":"camptodactyly ichthyosis syndrome","type":"related"},{"name":"camptodactyly-ichthyosis syndrome","type":"exact"}],"termid":"MONDO:0008902","xrefs":{"Monarch":{"xref_id":"0008902"}}}


id: GO:0099031
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"OBSOLETE. The component of the postsynaptic density membrane consisting of the gene products that are tethered to the membrane only by a covalently attached anchor, such as a lipid group that is embedded in the membrane. Gene products with peptide sequences that are embedded in the membrane are excluded from this grouping.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete anchored component of postsynaptic density membrane (obsolete GO:0099031)","termid":"GO:0099031"}


id: PATO:0000470
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An amount which is relatively high.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"increased_in_magnitude_relative_to","term_name":"normal","termid":"PATO:0000461"},{"relation_name":"is_a","term_name":"present","termid":"PATO:0000467"},{"relation_name":"is_a","term_name":"increased quality","termid":"PATO:0002300"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"increased amount","secondary_identifiers":["PATO:0000420","PATO:0000650"],"synonyms":[{"name":"accessory","type":"related"},{"name":"increased","type":"related"},{"name":"increased number","type":"exact"},{"name":"present in greater numbers in organism","type":"exact"},{"name":"supernumerary","type":"exact"}],"termid":"PATO:0000470"}


id: PBO:0045535
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"deoxythymidylate kinase","termid":"PBO:0045535"}


id: PBO:0005459
data:
  {"annotation_feature_type":"gene","cv_name":"EC numbers","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"1.4.1.2","termid":"PBO:0005459"}


id: PBO:0051321
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin kappa variable 1/OR22-1 (pseudogene)","termid":"PBO:0051321"}


id: PBO:0076271
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SYBU antisense RNA 1","termid":"PBO:0076271"}


id: MONDO:0019104
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Sandifer syndrome is a paroxysmal dystonic movement disorder occurring in association with gastro-oesophageal reflux, and, in some cases, hiatal hernia.","definition_xrefs":["Orphanet:71272"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"movement disorder","termid":"MONDO:0005395"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sandifer syndrome","secondary_identifiers":["MedDRA:10066142","GARD:9684","SCTID:230314007","MEDGEN:90922","UMLS:C0338465","MESH:C537234","NCIT:C113397"],"synonyms":[{"name":"Sandifer's syndrome","type":"related"}],"termid":"MONDO:0019104","xrefs":{"Monarch":{"xref_id":"0019104"}}}


id: GO:0051735
data:
  {"annotated_genes":["SJAG_00956"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[62564],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051730"}]},"cv_name":"molecular_function","definition":"Catalysis of the reaction: GTP + 5'-dephosphopolynucleotide = GDP + 5'-phosphopolynucleotide. The polynucleotide may be DNA or RNA.","definition_xrefs":["GOC:curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polynucleotide 5'-hydroxyl-kinase activity","termid":"GO:0051731"}],"gene_count":1,"genes_by_uniquename":{"SJAG_00956":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016740"},{"rel_name":"is_a","termid":"GO:0016301"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0016301","GO:0003824","GO:0016740","GO:0003674"],"is_obsolete":false,"name":"GTP-dependent polynucleotide 5'-hydroxyl-kinase activity","references_by_uniquename":{"GO_REF:0000002":null},"synonyms":[{"name":"GTP-dependent polynucleotide kinase activity","type":"broad"}],"termid":"GO:0051735","terms_by_termid":{"GO:0051730":null}}


id: FYPO:0002944
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype in which the amount of RNA measured in a cell is lower than normal when the cell is in G0 phase. Total RNA or a specific RNA may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased RNA level","termid":"FYPO:0000826"},{"relation_name":"is_a","term_name":"decreased level of substance in cell during G0","termid":"FYPO:0003864"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0006551"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0006551","FYPO:0000002","FYPO:0001985","FYPO:0005447"],"is_obsolete":false,"name":"decreased RNA level during G0","synonyms":[{"name":"decreased RNA accumulation during G0","type":"related"},{"name":"decreased RNA level during cell quiescence","type":"exact"},{"name":"decreased RNA level during quiescence","type":"exact"},{"name":"decreased transcript level during G0","type":"exact"},{"name":"reduced RNA level during G0","type":"exact"}],"termid":"FYPO:0002944"}


id: PATO:0000293
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000293 absolute activity value (obsolete PATO:0000293)","termid":"PATO:0000293"}


id: PBO:0057328
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 520c","termid":"PBO:0057328"}


id: PR:O42665
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- SPAC27D7.11c gene.","definition_xrefs":["UniProtKB:O42665","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"uncharacterized but2-like protein C27D7.11c (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPAC27D7.11c","synonyms":[{"name":"Spom972h-SPAC27D7.11c","type":"exact"}],"termid":"PR:O42665"}


id: MONDO:0032914
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 44","secondary_identifiers":["UMLS:C5394063","OMIM:618781","GARD:16380","DOID:0111851","MEDGEN:1716408"],"synonyms":[{"name":"CILD44","type":"related"},{"name":"CILIARY DYSKINESIA, PRIMARY, 44","type":"related"},{"name":"Ciliary Dyskinesia, Primary, 44, Without Situs Inversus","type":"related"}],"termid":"MONDO:0032914","xrefs":{"Monarch":{"xref_id":"0032914"}}}


id: PR:P50526
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- ssp1 gene.","definition_xrefs":["UniProtKB:P50526","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine/threonine-protein kinase ssp1 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPCC297.03","synonyms":[{"name":"Spom972h-ssp1","type":"exact"}],"termid":"PR:P50526"}


id: MONDO:0002598
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A malignant germ cell tumor arising in the central nervous system. It is characterized by the presence of primitive, large malignant germ cells and lymphocytes.","definition_xrefs":["NCIT:P378"],"direct_ancestors":[{"relation_name":"is_a","term_name":"malignant germ cell tumor","termid":"MONDO:0006290"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"}],"interesting_parent_ids":["MONDO:0004992"],"is_obsolete":false,"name":"germinoma","secondary_identifiers":["UMLS:C0206660","NCIT:C3753","MESH:D018237","ONCOTREE:GMN","DOID:3304","HP:0100620","ICDO:9064/3","MEDGEN:64626"],"synonyms":[{"name":"germinoma","type":"exact"},{"name":"germinoma (disease)","type":"exact"}],"termid":"MONDO:0002598","xrefs":{"Monarch":{"xref_id":"0002598"}}}


id: PBO:0056656
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mediator complex subunit 23","termid":"PBO:0056656"}


id: PBO:0067934
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 236","termid":"PBO:0067934"}


id: FYPO:0009111
data:
  {"alleles_by_uniquename":{"SJAG_02527:allele-1":{"allele_type":"disruption","description":"RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage","gene_uniquename":"SJAG_02527","name":"lig4::KanMX6","uniquename":"SJAG_02527:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121543],"is_not":false,"summary":null,"term":"FYPO:0009111"}]},"cv_name":"fission_yeast_phenotype","definition":"A vegetative cell population phenotype that reflects increased occurrence of flocculation. Flocculation is the non-sexual aggregation of single cells.","definition_xrefs":["PMID:35924983"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased flocculation","termid":"FYPO:0000155"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02527":null},"genotype_count":1,"genotypes_by_uniquename":{"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown":{"display_name":"lig4::KanMX6(RNA sequencing revealed that only the 5' end of the disrupted allele showed low RNA expression and coverage)[Knockdown]","display_uniquename":"lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_02527:allele-1","expression":"Knockdown"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0005447"],"is_obsolete":false,"name":"increased flocculation during vegetative growth","references_by_uniquename":{"PMID:37233261":null},"single_locus_annotated_genes":["SJAG_02527"],"single_locus_genotype_uniquenames":["lig4::KanMX6-RNA_sequencing_revealed_that_only_the_5'_end_of_the_disrupted_allele_showed_low_RNA_expression_and_coverage-disruption-expression-knockdown"],"termid":"FYPO:0009111","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000081":null,"FYPO:0009111":null}}


id: PBO:0090185
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pig-O","termid":"PBO:0090185"}


id: GO:0033688
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of osteoblast proliferation.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of cell population proliferation","termid":"GO:0042127"},{"relation_name":"regulates","term_name":"osteoblast proliferation","termid":"GO:0033687"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of osteoblast proliferation","termid":"GO:0033688"}


id: PBO:0078129
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"T cell receptor alpha variable 11 (pseudogene)","termid":"PBO:0078129"}


id: GO:0071989
data:
  {"annotated_genes":["SJAG_02731","SJAG_01546","SJAG_01211","SJAG_05220","SJAG_01224","SJAG_03437","SJAG_05266","SJAG_01371","SJAG_05319","SJAG_00918","SJAG_01775"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[98785,91758,100638,110927,91151,111939,116156,92989,109541,118979,102544],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990976"}]},"cv_name":"biological_process","definition":"The directed movement of a protein to a specific location at the spindle pole body.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein localization to spindle pole body","termid":"GO:0071988"},{"relation_name":"is_a","term_name":"establishment of protein localization to organelle","termid":"GO:0072594"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00918":null,"SJAG_01211":null,"SJAG_01224":null,"SJAG_01371":null,"SJAG_01546":null,"SJAG_01775":null,"SJAG_02731":null,"SJAG_03437":null,"SJAG_05220":null,"SJAG_05266":null,"SJAG_05319":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0051179"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150","GO:0051179"],"is_obsolete":false,"name":"establishment of protein localization to spindle pole body","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"establishment of protein localisation to spindle pole body","type":"exact"}],"termid":"GO:0071989","terms_by_termid":{"GO:1990976":null}}


id: PBO:0035909
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_histone_H3-K9_acetylation_at_centromere_during_vegetative_growth","termid":"PBO:0035909"}


id: GO:0010147
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of fructan, a polysaccharide consisting of fructose residues.","definition_xrefs":["GOC:pz"],"direct_ancestors":[{"relation_name":"is_a","term_name":"polysaccharide catabolic process","termid":"GO:0000272"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"fructan catabolic process","secondary_identifiers":["MetaCyc:PWY-862"],"synonyms":[{"name":"fructan breakdown","type":"exact"},{"name":"fructan catabolism","type":"exact"},{"name":"fructan degradation","type":"exact"},{"name":"levan catabolic process","type":"exact"},{"name":"levan catabolism","type":"exact"}],"termid":"GO:0010147"}


id: PBO:0072766
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"S100 calcium binding protein B","termid":"PBO:0072766"}


id: FYPO:0005150
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"An increased chemical resistance phenotype observed in the vegetative growth phase of the life cycle in which cells grow in the presence of a higher concentration of enfumafungin than normal.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"increased resistance to chemical during vegetative growth","termid":"FYPO:0000126"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002682"},{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000139"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0002682","FYPO:0005447","FYPO:0000139","FYPO:0000003"],"is_obsolete":false,"name":"resistance to enfumafungin","synonyms":[{"name":"resistance to enfumafungin during mitotic cell cycle","type":"related"},{"name":"resistance to enfumafungin during vegetative growth","type":"exact"},{"name":"resistant to enfumafungin","type":"exact"}],"termid":"FYPO:0005150"}


id: GO:0008494
data:
  {"annotated_genes":["SJAG_02043","SJAG_05000","SJAG_04959","SJAG_01249","SJAG_00887","SJAG_03550","SJAG_04929","SJAG_01517"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[90581,100722,101466,102486,103321,103933,109316,114732],"is_not":false,"summary":null,"term":"GO:0008494"}]},"cv_name":"molecular_function","definition":"Any of a group of soluble proteins functioning in the activation of ribosome-mediated translation of mRNA into a polypeptide.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"translation regulator activity","termid":"GO:0045182"}],"gene_count":8,"genes_by_uniquename":{"SJAG_00887":null,"SJAG_01249":null,"SJAG_01517":null,"SJAG_02043":null,"SJAG_03550":null,"SJAG_04929":null,"SJAG_04959":null,"SJAG_05000":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0045182"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0045182","GO:0003674"],"is_obsolete":false,"name":"translation activator activity","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0008494","terms_by_termid":{"GO:0008494":null}}


id: PBO:0112594
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial oxidoreductase for ubiquinone biosynthesis","termid":"PBO:0112594"}


id: PBO:0042873
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cilia and flagella associated protein 119","termid":"PBO:0042873"}


id: PBO:0090042
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"phosphatidylinositol-3-phosphatase, myotubularin family","termid":"PBO:0090042"}


id: MONDO:0012694
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any Joubert syndrome in which the cause of the disease is a mutation in the RPGRIP1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Joubert syndrome","termid":"MONDO:0018772"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Joubert syndrome 7","secondary_identifiers":["MESH:C566916","OMIM:611560","UMLS:C1969053","NCIT:C159653","DOID:0111002","GARD:15519","MEDGEN:369401"],"synonyms":[{"name":"JBTS7","type":"exact"},{"name":"Joubert syndrome 7","type":"exact"},{"name":"Joubert syndrome caused by mutation in RPGRIP1L","type":"exact"},{"name":"Joubert syndrome type 7","type":"exact"},{"name":"RPGRIP1L Joubert syndrome","type":"exact"}],"termid":"MONDO:0012694","xrefs":{"Monarch":{"xref_id":"0012694"}}}


id: GO:0071663
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate, or extent of production of granzyme B.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of production of molecular mediator of immune response","termid":"GO:0002702"},{"relation_name":"is_a","term_name":"regulation of granzyme B production","termid":"GO:0071661"},{"relation_name":"positively_regulates","term_name":"granzyme B production","termid":"GO:0071613"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"positively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"positive regulation of granzyme B production","termid":"GO:0071663"}


id: PBO:0088092
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"UDP-N-acetyl-glucosamine-1-P transferase; transfers Glc-Nac-P from UDP-GlcNac to Dol-P in the ER in the first step of the dolichol pathway of protein asparagine-linked glycosylation; inhibited by tunicamycin; human homolog DPAGT1 can complement yeast ALG7 mutant","termid":"PBO:0088092"}


id: PBO:0047319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"FAT atypical cadherin 3","termid":"PBO:0047319"}


id: GO:0048139
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Formation of a single follicular epithelium around the germ-line derived cells of a cyst formed in the female gonad.","definition_xrefs":["GOC:jid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"germ-line cyst encapsulation","termid":"GO:0048138"},{"relation_name":"part_of","term_name":"female gamete generation","termid":"GO:0007292"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"female germ-line cyst encapsulation","termid":"GO:0048139"}


id: MONDO:1010145
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any neurodevelopmental disorder in which the cause of the disease is a monoallelic gain-of-function variation in the PIP5K1C gene leading to increased levels of phosphatidylinositol 4,5 bisphosphate. This disorder is characterized by intellectual disability, motor and speech delay, microcephaly, seizures, visual and ocular abnormalities, and craniofacial dysmorphic features.","definition_xrefs":["PMID:37451268"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"PIP5K1C-related neurodevelopmental disorder","synonyms":[{"name":"PIP5K1C-related neurodevelopmental disorder","type":"exact"}],"termid":"MONDO:1010145","xrefs":{"Monarch":{"xref_id":"1010145"}}}


id: PBO:0063989
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"piwi-interacting RNA cluster 23","termid":"PBO:0063989"}


id: PBO:0017459
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-hyperparasite_of","termid":"PBO:0017459"}


id: PBO:0001998
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"geranylgeranyltransferase I beta subunit Cwg2","termid":"PBO:0001998"}


id: PBO:0116701
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NAD(P) dependent 3-beta-hydroxysteroid dehydrogenase NSDHL","termid":"PBO:0116701"}


id: PATO:0001716
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A structural quality inhering in a bearer by virtue of the bearer's ability to withstand great strain without tearing or breaking.","definition_xrefs":["thefreedictionary.com:thefreedictionary.com"],"direct_ancestors":[{"relation_name":"is_a","term_name":"fragility","termid":"PATO:0001662"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"non-fragile","synonyms":[{"name":"resilient","type":"related"},{"name":"strong","type":"related"},{"name":"tough","type":"related"}],"termid":"PATO:0001716"}


id: PBO:0051891
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"integrin subunit alpha 2","termid":"PBO:0051891"}


id: PBO:0046257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"elongator acetyltransferase complex subunit 6","termid":"PBO:0046257"}


id: MONDO:0016712
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Classic medulloblastoma is a histological variant of medulloblastoma, an embryonic malignancy, having a midline location, occurring most often in children and manifesting with variable symptoms such as headaches, nausea, vomiting and ataxia.","definition_xrefs":["Orphanet:251867"],"direct_ancestors":[{"relation_name":"is_a","term_name":"medulloblastoma","termid":"MONDO:0007959"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"classic medulloblastoma","secondary_identifiers":["UMLS:C1707400","SCTID:699704002","GARD:17216","icd11.foundation:1548011794","MEDGEN:353541","NCIT:C54039"],"synonyms":[{"name":"classic medulloblastoma","type":"exact"}],"termid":"MONDO:0016712","xrefs":{"Monarch":{"xref_id":"0016712"}}}


id: PBO:0002545
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"glucosyltransferase Alg8 (predicted)","termid":"PBO:0002545"}


id: PBO:0085961
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; overexpression confers resistance to the antimicrobial peptide MiAMP1 and causes growth arrest, apoptosis, and increased sensitivity to cobalt chloride","termid":"PBO:0085961"}


id: PBO:0076805
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tektin 4 pseudogene 2","termid":"PBO:0076805"}


id: GO:0001957
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Direct ossification that occurs within mesenchyme or an accumulation of relatively unspecialized cells.","definition_xrefs":["ISBN:0878932437"],"direct_ancestors":[{"relation_name":"is_a","term_name":"direct ossification","termid":"GO:0036072"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"intramembranous ossification","secondary_identifiers":["Wikipedia:Intramembranous_ossification"],"synonyms":[{"name":"dermal ossification","type":"narrow"},{"name":"intramembranous bone ossification","type":"related"}],"termid":"GO:0001957"}


id: PBO:0049812
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"HDAC4 antisense RNA 1","termid":"PBO:0049812"}


id: PBO:0043509
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"CNTNAP3 pseudogene 4","termid":"PBO:0043509"}


id: MONDO:0042600
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sammartino-Decreccio syndrome","secondary_identifiers":["MEDGEN:419806","UMLS:C2931447"],"synonyms":[{"name":"Sammartino Decreccio syndrome","type":"related"},{"name":"superficial annular corneal dystrophy, ichthyosis nigrans, microcephaly and mild mental subnormality","type":"related"}],"termid":"MONDO:0042600","xrefs":{"Monarch":{"xref_id":"0042600"}}}


id: GO:0032506
data:
  {"annotated_genes":["SJAG_03508","SJAG_03309","SJAG_04982","SJAG_01665","SJAG_03631","SJAG_03342","SJAG_04455","SJAG_05285","SJAG_04358","SJAG_03703","SJAG_04703","SJAG_00883","SJAG_01774","SJAG_00256","SJAG_02431","SJAG_04468","SJAG_01732","SJAG_05290","SJAG_00514","SJAG_04621","SJAG_04597","SJAG_03045","SJAG_00268","SJAG_01889","SJAG_02838","SJAG_06270","SJAG_03592","SJAG_04776","SJAG_01114","SJAG_04930","SJAG_03681","SJAG_01143","SJAG_00526","SJAG_00228","SJAG_02795","SJAG_00845","SJAG_04509","SJAG_02215","SJAG_00082","SJAG_00938","SJAG_02392","SJAG_03596","SJAG_01215","SJAG_03915","SJAG_02864","SJAG_01386","SJAG_00442","SJAG_00700","SJAG_02916","SJAG_02645","SJAG_00807","SJAG_00279","SJAG_01787","SJAG_00229","SJAG_01805","SJAG_03025","SJAG_01790","SJAG_02592","SJAG_01943","SJAG_01894","SJAG_01464","SJAG_05179","SJAG_02380","SJAG_04498","SJAG_03123","SJAG_04943","SJAG_01453","SJAG_03936","SJAG_02514","SJAG_02700","SJAG_04690","SJAG_02169","SJAG_03353","SJAG_02831","SJAG_03704","SJAG_04887","SJAG_04666","SJAG_04077","SJAG_03379","SJAG_03048","SJAG_02222","SJAG_03581","SJAG_01188"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[100296,91336,100038,110171],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0071520"},{"annotations":[91741],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0000917"},{"annotations":[101779,93303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0061796"},{"annotations":[77519,100913,99660,120545,59069,94551,112852,60223,99931,74498,104580,121258,68756,97302,70831,78268,90267,114363,76898,113922],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1903475"},{"annotations":[79366],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:1903479"},{"annotations":[90268,102721,99661,102953,104437,59068,97303,114364,100041,100914],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902404"},{"annotations":[98340,90280,110896,121442],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1902408"},{"annotations":[101301,106686,104659,108152,82302,110650,115133],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0140278"},{"annotations":[100285],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:2000432"},{"annotations":[96379,92776,97864,104383,105710,112817],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1903500"},{"annotations":[105711],"is_not":false,"rel_names":["negatively_regulates","is_a","regulates"],"summary":null,"term":"GO:1903472"},{"annotations":[104388],"is_not":false,"rel_names":["negatively_regulates","regulates"],"summary":null,"term":"GO:1905757"},{"annotations":[103293,95466,94938,93746,94853,92734,109575,109265,109132,97650,107070,112216,74859,101604,117964],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:0031030"},{"annotations":[96421,92008],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1903501"},{"annotations":[112575,96592,96422,115420,89535],"is_not":false,"rel_names":["is_a","positively_regulates","regulates"],"summary":null,"term":"GO:1903473"},{"annotations":[105716,121443,112819,92778],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1903617"},{"annotations":[91880,108416,115421,117534,94428,109078,79886,95815,119955,107209],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:0140281"},{"annotations":[89536,94429,96425],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:1905758"},{"annotations":[89537,92012,95819,112576,104402],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0031031"},{"annotations":[108136,116445],"is_not":false,"rel_names":["part_of","is_a"],"summary":null,"term":"GO:0031671"},{"annotations":[80146],"is_not":false,"rel_names":["regulates","is_a"],"summary":null,"term":"GO:0031991"},{"annotations":[77514,80144,89904],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:0032955"},{"annotations":[121355,95821],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1903499"},{"annotations":[103412,89861,113431],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1902472"},{"annotations":[117881],"is_not":false,"rel_names":["is_a","part_of"],"summary":null,"term":"GO:1990344"}]},"cv_name":"biological_process","definition":"A cellular process that is involved in cytokinesis (the division of the cytoplasm of a cell and its separation into two daughter cells).","definition_xrefs":["GOC:isa_complete","GOC:mah","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle 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process","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null,"PMID:25866389":null,"PMID:27059155":null,"PMID:32915139":null},"termid":"GO:0032506","terms_by_termid":{"GO:0000917":null,"GO:0031030":null,"GO:0031031":null,"GO:0031671":null,"GO:0031991":null,"GO:0032955":null,"GO:0061796":null,"GO:0071520":null,"GO:0120306":null,"GO:0140278":null,"GO:0140281":null,"GO:1902404":null,"GO:1902408":null,"GO:1902472":null,"GO:1903472":null,"GO:1903473":null,"GO:1903475":null,"GO:1903479":null,"GO:1903499":null,"GO:1903500":null,"GO:1903501":null,"GO:1903617":null,"GO:1905757":null,"GO:1905758":null,"GO:1990344":null,"GO:2000432":null}}


id: PBO:0067087
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 123, pseudogene","termid":"PBO:0067087"}


id: PBO:0072179
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S16 pseudogene 6","termid":"PBO:0072179"}


id: PBO:0055694
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"limb and CNS expressed 1 like","termid":"PBO:0055694"}


id: PBO:0083906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Flavin-linked sulfhydryl oxidase localized to the ER lumen; involved in disulfide bond formation within the endoplasmic reticulum (ER)","termid":"PBO:0083906"}


id: GO:0051393
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to alpha-actinin, one of a family of proteins that cross-link F-actin as antiparallel homodimers. Alpha-actinin has a molecular mass of 93-103 KDa; at the N-terminus there are two calponin homology domains, at the C-terminus there are two EF-hands. These two domains are connected by the rod domain. This domain is formed by triple-helical spectrin repeats.","definition_xrefs":["PMID:10984498","PMID:11699871","PMID:15014165"],"direct_ancestors":[{"relation_name":"is_a","term_name":"actinin binding","termid":"GO:0042805"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0008092"},{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0005515"}],"interesting_parent_ids":["GO:0003674","GO:0005515","GO:0005488","GO:0008092"],"is_obsolete":false,"name":"alpha-actinin binding","secondary_identifiers":["GO:0051372"],"synonyms":[{"name":"alpha-actinin 1 binding","type":"narrow"},{"name":"alpha-actinin 4 binding","type":"narrow"},{"name":"nonmuscle alpha-actinin binding","type":"narrow"}],"termid":"GO:0051393"}


id: PBO:0031794
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_cell_cycle_phase","termid":"PBO:0031794"}


id: FYPO:0003650
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of protein measured in a cell during a cellular response to glucose starvation is lower than normal. Total protein or a specific protein may be affected.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"decreased protein level during vegetative growth","termid":"FYPO:0001324"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"output_of","termid":"FYPO:0006551"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0001320","FYPO:0005447","FYPO:0006551","FYPO:0000002"],"is_obsolete":false,"name":"decreased protein level during cellular response to glucose starvation","synonyms":[{"name":"decreased protein accumulation during cellular response to glucose starvation","type":"related"},{"name":"decreased protein level during cellular response to glucose depletion","type":"exact"},{"name":"decreased protein level during cellular response to glucose deprivation","type":"exact"},{"name":"decreased protein level during cellular response to glucose limitation","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during mitotic cell cycle","type":"related"},{"name":"decreased protein level during cellular response to glucose starvation during vegetative growth","type":"exact"},{"name":"decreased protein level during glucose starvation","type":"exact"},{"name":"reduced protein level during cellular response to glucose starvation","type":"exact"}],"termid":"FYPO:0003650"}


id: PBO:0011494
data:
  {"annotation_feature_type":"gene","cv_name":"name_description","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"centaurin b5-like gene","termid":"PBO:0011494"}


id: GO:0033508
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the breakdown of L-glutamate into other compounds, including butyrate.","definition_xrefs":["MetaCyc:PWY-5087","GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-glutamate catabolic process","termid":"GO:0006538"},{"relation_name":"is_a","term_name":"butyrate metabolic process","termid":"GO:0019605"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0006520"},{"rel_name":"is_a","termid":"GO:0044281"},{"rel_name":"is_a","termid":"GO:0006629"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0006520","GO:0044281","GO:0008150","GO:0006629"],"is_obsolete":false,"name":"L-glutamate catabolic process to butyrate","synonyms":[{"name":"glutamate breakdown to butyrate","type":"exact"},{"name":"glutamate degradation to butyrate","type":"exact"}],"termid":"GO:0033508"}


id: MONDO:0007415
data:
  {"annotated_genes":["SJAG_01405"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[88452],"is_not":false,"summary":null,"term":"MONDO:0007415"}]},"cv_name":"mondo","definition":"Any mitochondrial complex III deficiency in which the cause of the disease is a mutation in the BCS1L gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitochondrial complex III deficiency, nuclear type","termid":"MONDO:0020811"}],"gene_count":1,"genes_by_uniquename":{"SJAG_01405":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004069"},{"rel_name":"is_a","termid":"MONDO:0005066"}],"interesting_parent_ids":["MONDO:0004069","MONDO:0005066"],"is_obsolete":false,"name":"mitochondrial complex III deficiency nuclear type 1","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["OMIM:124000","GARD:15056","MEDGEN:762097","UMLS:C3541471","DOID:0080111","MESH:C565128"],"synonyms":[{"name":"BCS1L mitochondrial complex III deficiency","type":"exact"},{"name":"Complex 3 mitochondrial respiratory chain deficiency","type":"related"},{"name":"MC3DN1","type":"related"},{"name":"mitochondrial Complex 3 deficiency, nuclear type 1","type":"related"},{"name":"mitochondrial complex III deficiency","type":"related"},{"name":"mitochondrial complex III deficiency caused by mutation in BCS1L","type":"exact"},{"name":"mitochondrial complex III deficiency, nuclear type 1","type":"related"}],"termid":"MONDO:0007415","terms_by_termid":{"MONDO:0007415":null},"xrefs":{"Monarch":{"xref_id":"0007415"}}}


id: GO:0015007
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"OBSOLETE. A molecular entity that serves as an electron acceptor and electron donor in a chlorophyll electron transport system.","definition_xrefs":["ISBN:0198506732"],"gene_count":0,"genotype_count":0,"name":"obsolete electron carrier, chlorophyll electron transport system (obsolete GO:0015007)","synonyms":[{"name":"chlorophyll electron carrier","type":"related"},{"name":"electron carrier, chlorophyll electron transport system","type":"exact"}],"termid":"GO:0015007"}


id: PBO:0063596
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peroxisomal biogenesis factor 11 alpha","termid":"PBO:0063596"}


id: GO:0036033
data:
  {"annotated_genes":["SJAG_03981"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[105186],"is_not":false,"summary":null,"term":"GO:0036033"}]},"cv_name":"molecular_function","definition":"Binding to a mediator complex. The mediator complex is a protein complex that interacts with the carboxy-terminal domain of the largest subunit of RNA polymerase II and plays an active role in transducing the signal from a transcription factor to the transcriptional machinery. The Saccharomyces complex contains several identifiable subcomplexes: a head domain comprising Srb2, -4, and -5, Med6, -8, and -11, and Rox3 proteins; a middle domain comprising Med1, -4, and -7, Nut1 and -2, Cse2, Rgr1, Soh1, and Srb7 proteins; a tail consisting of Gal11p, Med2p, Pgd1p, and Sin4p; and a regulatory subcomplex comprising Ssn2, -3, and -8, and Srb8 proteins. Metazoan mediator complexes have similar modular structures and include homologs of yeast Srb and Med proteins.","definition_xrefs":["PMID:18391015","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex binding","termid":"GO:0044877"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03981":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005488"},{"rel_name":"is_a","termid":"GO:0003674"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"mediator complex binding","references_by_uniquename":{"GO_REF:0000107":null},"termid":"GO:0036033","terms_by_termid":{"GO:0036033":null}}


id: PBO:0067257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 7SL, cytoplasmic 331, pseudogene","termid":"PBO:0067257"}


id: PBO:0051247
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable (II)-78-1 (pseudogene)","termid":"PBO:0051247"}


id: GO:0008652
data:
  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chemical reactions and pathways resulting in the formation of amino acids, organic acids containing one or more amino substituents.","definition_xrefs":["ISBN:0198506732"],"direct_ancestors":[{"relation_name":"is_a","term_name":"amino acid metabolic process","termid":"GO:0006520"},{"relation_name":"is_a","term_name":"biosynthetic 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id: PBO:0085993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein of unknown function; required for survival upon exposure to K1 killer toxin; proposed to regulate double-strand break repair via non-homologous end-joining","termid":"PBO:0085993"}


id: PBO:0077937
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TPTEP2-CSNK1E readthrough","termid":"PBO:0077937"}


id: FYPO:0003534
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell population phenotype in which the monopolar index is lower than normal. The monopolar index is the proportion of the population undergoing monopolar growth at any given time.","definition_xrefs":["PomBase:al","PomBase:mah","PMID:20501954"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell population phenotype","termid":"FYPO:0000003"},{"relation_name":"is_a","term_name":"abnormal phenotype","termid":"FYPO:0001985"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0000003","FYPO:0001985"],"is_obsolete":false,"name":"decreased monopolar index","synonyms":[{"name":"decreased frequency of monopolar growth polarity","type":"related"},{"name":"decreased number of cells undergoing monopolar growth","type":"exact"},{"name":"reduced monopolar index","type":"exact"}],"termid":"FYPO:0003534"}


id: PBO:0060933
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"NFATC2IP antisense RNA 1","termid":"PBO:0060933"}


id: FYPO:0004119
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that is elongated, has more than one nucleus, has one or more septa with abnormal size, shape, or structure, and that undergoes two or more rounds of cell division, and then dies.","definition_xrefs":["PMID:15116432","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, multiple cell divisions, elongated cell","termid":"FYPO:0002262"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000002","FYPO:0001320","FYPO:0000005","FYPO:0000004","FYPO:0001985"],"is_obsolete":false,"name":"inviable after spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","synonyms":[{"name":"inviable following spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","type":"exact"},{"name":"inviable germinated spore, multiple cell divisions, elongated multinucleate cell with abnormal septum formation","type":"exact"},{"name":"lethal after spore germination, multiple cell divisions, elongated multinucleate cell with abnormal septum morphology","type":"exact"}],"termid":"FYPO:0004119"}


id: MONDO:0003703
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete uterine corpus leiomyomatosis (obsolete MONDO:0003703)","termid":"MONDO:0003703","xrefs":{"Monarch":{"xref_id":"0003703"}}}


id: GO:0008377
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The process in which the detection of light triggers the release of internally sequestered calcium ions.","definition_xrefs":["GOC:ai"],"gene_count":0,"genotype_count":0,"name":"obsolete light-induced release of internally sequestered calcium ion (obsolete GO:0008377)","synonyms":[{"name":"light-induced release of calcium from internal store","type":"exact"},{"name":"light-induced release of internally sequestered calcium ion (Ca2+)","type":"exact"},{"name":"light-induced release of internally stored calcium ion (Ca2+)","type":"exact"}],"termid":"GO:0008377"}


id: _global:homologous_to
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","direct_ancestors":[{"relation_name":"is_a","term_name":"similar_to","termid":"_global:similar_to"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"homologous_to","termid":"_global:homologous_to"}


id: MONDO:0017491
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"tibial hemimelia","termid":"MONDO:0010144"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005497"}],"interesting_parent_ids":["MONDO:0005497"],"is_obsolete":false,"name":"tibial hemimelia, bilateral","secondary_identifiers":["icd11.foundation:1562926182","Orphanet:295079","MEDGEN:1776601","UMLS:C5438440"],"synonyms":[{"name":"tibial longitudinal meromelia, bilateral","type":"exact"}],"termid":"MONDO:0017491","xrefs":{"Monarch":{"xref_id":"0017491"}}}


id: GO:1904529
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of actin filament binding.","definition_xrefs":["GOC:TermGenie","GO_REF:0000059","GOC:als","PMID:24520051"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of actin filament binding (obsolete GO:1904529)","synonyms":[{"name":"regulation of F-actin binding","type":"exact"},{"name":"regulation of actin cross-linking activity","type":"related"}],"termid":"GO:1904529"}


id: PBO:0088477
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RagA/B GTPase Gtr1","termid":"PBO:0088477"}


id: PBO:0073585
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"shieldin complex subunit 2 pseudogene 1","termid":"PBO:0073585"}


id: GO:0052140
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of a motile cell or organism towards a higher concentration of a specific chemical within its host organism. The host is defined as the larger of the organisms involved in a symbiotic interaction.","definition_xrefs":["GOC:mtg_pamgo_17jul06"],"gene_count":0,"genotype_count":0,"name":"obsolete positive chemotaxis in host (obsolete GO:0052140)","synonyms":[{"name":"positive chemotaxis within host","type":"exact"}],"termid":"GO:0052140"}


id: GO:0052628
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: 4-hydroxybenzoate + L-glutamate + ATP = N-(4-hydroxybenzoyl)-L-glutamate + AMP + diphosphate + H+.","definition_xrefs":["PMID:19189963","MetaCyc:RXN-10887"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acid-amino acid ligase activity","termid":"GO:0016881"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016874"}],"interesting_parent_ids":["GO:0003674","GO:0016874","GO:0003824"],"is_obsolete":false,"name":"N-(4-hydroxybenzoyl)-L-glutamate synthetase activity","synonyms":[{"name":"4-hydroxybenzoate amino acid synthetase activity","type":"broad"},{"name":"4-hydroxybenzoyl amino acid synthetase activity","type":"exact"},{"name":"4HBA amino acid synthetase activity","type":"exact"},{"name":"p-hydroxybenzoate amino acid synthetase activity","type":"exact"},{"name":"p-hydroxybenzoyl amino acid synthetase activity","type":"exact"}],"termid":"GO:0052628"}


id: MONDO:0033613
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"spastic quadriplegic cerebral palsy","termid":"MONDO:0016215"},{"relation_name":"is_a","term_name":"Mendelian neurodevelopmental disorder","termid":"MONDO:0100500"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"neurodevelopmental disorder with progressive spasticity and brain white matter abnormalities","secondary_identifiers":["MEDGEN:1736667","OMIM:603513","UMLS:C5436628","GARD:10447","Orphanet:641353","OMIM:619026","MESH:C567853"],"synonyms":[{"name":"CPSQ1","type":"related"},{"name":"NEDSWMA","type":"exact"},{"name":"cerebral palsy spastic quadriplegic","type":"related"},{"name":"cerebral palsy, spastic quadriplegic, 1","type":"exact"},{"name":"cerebral palsy, spastic quadriplegic, type 1","type":"exact"},{"name":"infantile neurodegeneration-progressive spasticity-intellectual disability-white matter lesions syndrome","type":"exact"}],"termid":"MONDO:0033613","xrefs":{"Monarch":{"xref_id":"0033613"}}}


id: GO:1901257
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents or reduces the frequency, rate or extent of macrophage colony-stimulating factor production.","definition_xrefs":["GOC:BHF","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of cytokine production","termid":"GO:0001818"},{"relation_name":"is_a","term_name":"regulation of macrophage colony-stimulating factor production","termid":"GO:1901256"},{"relation_name":"negatively_regulates","term_name":"macrophage colony-stimulating factor production","termid":"GO:0036301"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"regulates","termid":"GO:0010467"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0010467"}],"interesting_parent_ids":["GO:0008150","GO:0010467"],"is_obsolete":false,"name":"negative regulation of macrophage colony-stimulating factor production","synonyms":[{"name":"down regulation of M-CSF production","type":"exact"},{"name":"down regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"down-regulation of M-CSF production","type":"exact"},{"name":"down-regulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"downregulation of M-CSF production","type":"exact"},{"name":"downregulation of macrophage colony-stimulating factor production","type":"exact"},{"name":"inhibition of M-CSF production","type":"exact"},{"name":"inhibition of macrophage colony-stimulating factor production","type":"narrow"},{"name":"negative regulation of M-CSF production","type":"exact"}],"termid":"GO:1901257"}


id: MONDO:0013650
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A hypotrichosis that has material basis in an autosomal recessive mutation on chromosome 7p22.3-p21.3.","definition_xrefs":["PMID:20544222","DOID:0110707"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hypotrichosis","termid":"MONDO:0003037"},{"relation_name":"is_a","term_name":"hypotrichosis simplex","termid":"MONDO:0018914"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"hypotrichosis 10","secondary_identifiers":["MEDGEN:481883","OMIM:614238","UMLS:C3280253","GARD:15782"],"synonyms":[{"name":"HYPT10","type":"exact"},{"name":"hypotrichosis 10","type":"exact"},{"name":"hypotrichosis type 10","type":"exact"},{"name":"hypt10","type":"exact"}],"termid":"MONDO:0013650","xrefs":{"Monarch":{"xref_id":"0013650"}}}


id: MONDO:1010072
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Factor X deficiency that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematologic disorder, non-human animal","termid":"MONDO:1011319"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"factor X deficiency, non-human animal","secondary_identifiers":["OMIA:000362"],"termid":"MONDO:1010072","xrefs":{"Monarch":{"xref_id":"1010072"}}}


id: GO:0071332
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a fructose stimulus.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to fructose","termid":"GO:0009750"},{"relation_name":"is_a","term_name":"cellular response to hexose stimulus","termid":"GO:0071331"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"cellular response to fructose stimulus","termid":"GO:0071332"}


id: PBO:0036297
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"possible membrane linking protein involved in beta-glucan biosynthesis (predicted)","termid":"PBO:0036297"}


id: PBO:0080627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"WD repeat domain 74","termid":"PBO:0080627"}


id: PR:O59667
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- his7 gene.","definition_xrefs":["PRO:DNx","UniProtKB:O59667"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"histidine biosynthesis bifunctional protein his7 (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC29A3.02c","synonyms":[{"name":"Spom972h-his7","type":"exact"}],"termid":"PR:O59667"}


id: PBO:0000267
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"serine O-acetyltransferase activity (predicted)","termid":"PBO:0000267"}


id: MONDO:1010143
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Incontinentia pigmenti that occurs in non-human animals.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital nervous system disorder, non-human animal","termid":"MONDO:1011308"},{"relation_name":"is_a","term_name":"disorder of orbital region, non-human animal","termid":"MONDO:1011315"},{"relation_name":"is_a","term_name":"disorder of visual system, non-human animal","termid":"MONDO:1011316"},{"relation_name":"is_a","term_name":"integumentary system disorder, non-human animal","termid":"MONDO:1011328"},{"relation_name":"is_a","term_name":"syndromic disease, non-human animal","termid":"MONDO:1011360"},{"relation_name":"is_a","term_name":"hereditary neurological disease, non-human animal","termid":"MONDO:1012972"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"incontinentia pigmenti, non-human animal","secondary_identifiers":["OMIA:001899"],"termid":"MONDO:1010143","xrefs":{"Monarch":{"xref_id":"1010143"}}}


id: PBO:0057257
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 484","termid":"PBO:0057257"}


id: MOD:01878
data:
  {"annotation_feature_type":"gene","cv_name":"PSI-MOD","definition":"A protein modification that effectively converts an L-cysteine residue and an L-threonine residue to L-threonine 5-hydroxyoxazole-4-carbothionic acid.","definition_xrefs":["PubMed:20961038","RESID:AA0554"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxazole/oxazoline ring crosslinked residues (Cys)","termid":"MOD:01856"},{"relation_name":"is_a","term_name":"crosslinked L-cysteine residue","termid":"MOD:02044"},{"relation_name":"is_a","term_name":"crosslinked L-threonine residue","termid":"MOD:02056"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MOD:00905"}],"interesting_parent_ids":["MOD:00905"],"is_obsolete":false,"name":"L-threonine 5-hydroxyoxazole-4-carbonthionic acid","synonyms":[{"name":"(4Z)-2-[(1S,2R)-1-amino-2-hydroxypropyl]-4-(sulfanylmethylidene)-1,3-oxazol-5(4H)-one [tautomer]","type":"exact"},{"name":"2-[(1S,2R)-1-amino-2-hydroxypropyl]-5-hydroxy-1,3-oxazole-4-carbothioic O-acid","type":"exact"},{"name":"CROSSLNK Threonine 5-hydroxy-oxazole-4-carbonthionic acid (Thr-Cys)","type":"exact"},{"name":"L-threonine 5-hydroxy-oxazole-4-carbonthionic acid","type":"exact"}],"termid":"MOD:01878"}


id: GO:0033670
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Any process that modulates the frequency, rate or extent of NAD kinase activity, the catalysis of the transfer of a phosphate group, usually from ATP, to an NAD molecule.","definition_xrefs":["GOC:mah"],"gene_count":0,"genotype_count":0,"name":"obsolete regulation of NAD+ kinase activity (obsolete GO:0033670)","synonyms":[{"name":"NAD kinase regulator","type":"narrow"},{"name":"regulation of NAD kinase activity","type":"exact"}],"termid":"GO:0033670"}


id: PBO:0050664
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"heat shock protein family A (Hsp70) member 2","termid":"PBO:0050664"}


id: MONDO:0000199
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete familial adenomatous polyposis (obsolete MONDO:0000199)","termid":"MONDO:0000199","xrefs":{"Monarch":{"xref_id":"0000199"}}}


id: PATO:0000753
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0000753 spontaneous activity value (obsolete PATO:0000753)","termid":"PATO:0000753"}


id: PR:O74794
data:
  {"annotation_feature_type":"gene","cv_name":"protein","definition":"A protein that is a translation product of the Schizosaccharomyces pombe 972h- cyc3 gene.","definition_xrefs":["UniProtKB:O74794","PRO:DNx"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Schizosaccharomyces pombe 972h- protein","termid":"PR:000029043"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cytochrome c heme lyase (Schizosaccharomyces pombe 972h-)","pombase_gene_id":"SPBC26H8.12","synonyms":[{"name":"CCHL (Schizosaccharomyces pombe 972h-)","type":"exact"},{"name":"Spom972h-cyc3","type":"exact"},{"name":"holocytochrome-c synthase (Schizosaccharomyces pombe 972h-)","type":"exact"}],"termid":"PR:O74794"}


id: PBO:0065519
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pentatricopeptide repeat domain 1","termid":"PBO:0065519"}


id: PBO:0049403
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"guanylate cyclase activator 1B","termid":"PBO:0049403"}


id: PBO:0041004
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"BLOC-1 related complex subunit 6","termid":"PBO:0041004"}


id: GO:0008608
data:
  {"annotated_genes":["SJAG_03683","SJAG_00678","SJAG_01775","SJAG_01805","SJAG_03437","SJAG_00918","SJAG_03926","SJAG_00082","SJAG_03540","SJAG_04623","SJAG_04140","SJAG_01837","SJAG_02624","SJAG_01370","SJAG_03220","SJAG_03989","SJAG_04076","SJAG_01224","SJAG_05266","SJAG_00646","SJAG_00794","SJAG_05220","SJAG_01371","SJAG_02346","SJAG_02451","SJAG_03327","SJAG_00768","SJAG_04040","SJAG_02286","SJAG_01297","SJAG_00335","SJAG_04412","SJAG_04508","SJAG_01082","SJAG_03048","SJAG_00930","SJAG_02761","SJAG_02814","SJAG_01278","SJAG_00207","SJAG_04259","SJAG_00418","SJAG_04884","SJAG_02336","SJAG_05319","SJAG_01211","SJAG_01601","SJAG_04280","SJAG_02045","SJAG_03217","SJAG_05290","SJAG_00302","SJAG_02731","SJAG_03126","SJAG_03543"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89876,95841],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051456"},{"annotations":[97572,92048,93000,93393,113738,112363,77669,89762,99915,112409,70397,66954,74892,73966,118586,102399,107499,90010],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051315"},{"annotations":[110293],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0099607"},{"annotations":[64864,110298,105559,95843,79929,91370,105913,111938,102543,114679,115285,104451,116155,91757,92988,114678,118978,120774,101135,110926,116558,91150,96207,100636,109540],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990758"},{"annotations":[104378],"is_not":false,"rel_names":["regulates","negatively_regulates"],"summary":null,"term":"GO:1902424"},{"annotations":[118069,107208,114017],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1902425"},{"annotations":[104398,113256,95817,118740,92010],"is_not":false,"rel_names":["regulates","positively_regulates"],"summary":null,"term":"GO:0140429"},{"annotations":[118743],"is_not":false,"rel_names":["regulates"],"summary":null,"term":"GO:1904967"},{"annotations":[111185],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031134"},{"annotations":[107502,97327,97573,100640,99916,91152,95822,102545,115286,111940,117987,92990,110928,91759,111186,112366,109542,109860,112410,116157,104452,103360,118980],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051455"}]},"cv_name":"biological_process","definition":"The process in which spindle microtubules become physically associated with the proteins making up the kinetochore complex.","definition_xrefs":["PMID:10322137","GOC:vw"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell cycle process","termid":"GO:0022402"},{"relation_name":"part_of","term_name":"metaphase chromosome 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of spindle microtubules to kinetochore","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null,"GO_REF:0000117":null},"secondary_identifiers":["GO:0051313"],"synonyms":[{"name":"amphotelic attachment","type":"related"},{"name":"attachment of spindle microtubules to chromosome","type":"exact"},{"name":"bipolar attachment","type":"related"},{"name":"kinetochore microtubule interaction","type":"broad"},{"name":"kinetochore-microtubule attachment","type":"exact"},{"name":"kinetochore-microtubule interaction","type":"broad"},{"name":"microtubule anchoring at kinetochore","type":"exact"},{"name":"microtubule and chromosome interaction","type":"broad"},{"name":"microtubule and kinetochore interaction","type":"related"},{"name":"microtubule capture","type":"narrow"},{"name":"spindle chromosome attachment","type":"exact"},{"name":"spindle kinetochore attachment","type":"exact"},{"name":"spindle-chromosome interaction","type":"broad"}],"termid":"GO:0008608","terms_by_termid":{"GO:0031134":null,"GO:0051315":null,"GO:0051455":null,"GO:0051456":null,"GO:0099607":null,"GO:0140429":null,"GO:1902424":null,"GO:1902425":null,"GO:1904967":null,"GO:1990758":null}}


id: PBO:0036541
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"midasin, Mdn1","termid":"PBO:0036541"}


id: GO:1904514
data:
  {"annotated_genes":["SJAG_03438","SJAG_03720","SJAG_00364","SJAG_03048"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[91069,104391,108653,118293],"is_not":false,"summary":null,"term":"GO:1904514"}]},"cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of initiation of premeiotic DNA replication.","definition_xrefs":["GO_REF:0000058","GOC:TermGenie","PMID:25891897"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of nuclear cell cycle DNA replication","termid":"GO:0010571"},{"relation_name":"is_a","term_name":"positive regulation of DNA-templated DNA replication initiation","termid":"GO:0032298"},{"relation_name":"is_a","term_name":"regulation of initiation of premeiotic DNA replication","termid":"GO:1904512"},{"relation_name":"is_a","term_name":"positive regulation of reproductive process","termid":"GO:2000243"},{"relation_name":"positively_regulates","term_name":"meiotic DNA replication initiation","termid":"GO:1902974"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_03048":null,"SJAG_03438":null,"SJAG_03720":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"positively_regulates","termid":"GO:0006260"},{"rel_name":"regulates","termid":"GO:0006259"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0007049"},{"rel_name":"positively_regulates","termid":"GO:0006259"},{"rel_name":"regulates","termid":"GO:0006260"}],"interesting_parent_ids":["GO:0008150","GO:0007049","GO:0006259","GO:0006260"],"is_obsolete":false,"name":"positive regulation of initiation of premeiotic DNA replication","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"activation of initiation of meiotic DNA synthesis","type":"related"},{"name":"activation of initiation of premeiotic DNA replication","type":"narrow"},{"name":"activation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"activation of meiotic DNA replication initiation","type":"related"},{"name":"activation of premeiotic DNA replication initiation","type":"narrow"},{"name":"positive regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"positive regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"positive regulation of meiotic DNA replication initiation","type":"related"},{"name":"positive regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up regulation of meiotic DNA replication initiation","type":"related"},{"name":"up regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"up-regulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"up-regulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"up-regulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"up-regulation of meiotic DNA replication initiation","type":"related"},{"name":"up-regulation of premeiotic DNA replication initiation","type":"exact"},{"name":"upregulation of initiation of meiotic DNA synthesis","type":"related"},{"name":"upregulation of initiation of premeiotic DNA replication","type":"exact"},{"name":"upregulation of initiation of premeiotic DNA synthesis","type":"related"},{"name":"upregulation of meiotic DNA replication initiation","type":"related"},{"name":"upregulation of premeiotic DNA replication initiation","type":"exact"}],"termid":"GO:1904514","terms_by_termid":{"GO:1904514":null}}


id: MONDO:1011018
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"L-2-hydroxyglutaricacidemia that occurs in dog.","definition_xrefs":["MONDO:patterns/nonhuman_disease"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-2-hydroxyglutaricacidemia, non-human animal","termid":"MONDO:1010244"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"L-2-hydroxyglutaricacidemia, dog","secondary_identifiers":["OMIA:001371-9615"],"termid":"MONDO:1011018","xrefs":{"Monarch":{"xref_id":"1011018"}}}


id: PBO:0061295
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neuropeptide B","termid":"PBO:0061295"}


id: PBO:0034644
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_viability_upon_nitrogen_starvation","termid":"PBO:0034644"}


id: PATO:0002387
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"Extremely acute and aggressive onset of a pathological process.","definition_xrefs":["PATOC:PNS"],"direct_ancestors":[{"relation_name":"is_a","term_name":"acute","termid":"PATO:0000389"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"peracute","synonyms":[{"name":"per-acute","type":"exact"}],"termid":"PATO:0002387"}


id: GO:1901824
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The chemical reactions and pathways resulting in the formation of alpha-carotene.","definition_xrefs":["MetaCyc:PWY-5946","PMID:8837512","UniPathway:UPA00801","GOC:yaf","GOC:TermGenie"],"direct_ancestors":[{"relation_name":"is_a","term_name":"carotenoid biosynthetic process","termid":"GO:0016117"},{"relation_name":"is_a","term_name":"carotene biosynthetic process","termid":"GO:0016120"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006629"}],"interesting_parent_ids":["GO:0006629","GO:0008150"],"is_obsolete":false,"name":"alpha-carotene biosynthetic process","synonyms":[{"name":"delta-carotene anabolism","type":"exact"},{"name":"delta-carotene biosynthesis","type":"exact"},{"name":"delta-carotene biosynthetic process","type":"exact"},{"name":"delta-carotene formation","type":"exact"},{"name":"delta-carotene synthesis","type":"exact"}],"termid":"GO:1901824"}


id: GO:0061983
data:
  {"annotated_genes":["SJAG_03989","SJAG_04271","SJAG_00646","SJAG_00145","SJAG_03090","SJAG_00666","SJAG_04508","SJAG_00207","SJAG_00678","SJAG_00486","SJAG_04853"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[89876,95841],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0051456"},{"annotations":[109753,107152,108866],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0007135"},{"annotations":[90011,113739,115284],"is_not":false,"rel_names":["part_of"],"summary":null,"term":"GO:0045144"},{"annotations":[102162,104303],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:1990950"},{"annotations":[97174],"is_not":false,"rel_names":["positively_regulates","regulates"],"summary":null,"term":"GO:1905191"}]},"cv_name":"biological_process","definition":"A process that coontributes to the second meiotic division. The second meiotic division separates chromatids resulting in a haploid number of chromosomes.","definition_xrefs":["PMID:29385397"],"direct_ancestors":[{"relation_name":"is_a","term_name":"meiotic cell cycle process","termid":"GO:1903046"}],"gene_count":11,"genes_by_uniquename":{"SJAG_00145":null,"SJAG_00207":null,"SJAG_00486":null,"SJAG_00646":null,"SJAG_00666":null,"SJAG_00678":null,"SJAG_03090":null,"SJAG_03989":null,"SJAG_04271":null,"SJAG_04508":null,"SJAG_04853":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0007049","GO:0008150"],"is_obsolete":false,"name":"meiosis II cell cycle process","references_by_uniquename":{"GO_REF:0000107":null},"synonyms":[{"name":"second meiotic division","type":"exact"}],"termid":"GO:0061983","terms_by_termid":{"GO:0007135":null,"GO:0045144":null,"GO:0051456":null,"GO:1905191":null,"GO:1990950":null}}


id: MONDO:1011777
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"digestive system disorder, non-human animal","termid":"MONDO:1011311"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"portosystemic hepatic encephalopathy, non-human animal","secondary_identifiers":["OMIA:000816"],"termid":"MONDO:1011777","xrefs":{"Monarch":{"xref_id":"1011777"}}}


id: MONDO:0033369
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"genetic developmental and epileptic encephalopathy","termid":"MONDO:0100062"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"},{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0700092","MONDO:0005027"],"is_obsolete":false,"name":"developmental and epileptic encephalopathy, 60","secondary_identifiers":["DOID:0080432","UMLS:C4693663","MEDGEN:1638894","GARD:16270","OMIM:617929"],"synonyms":[{"name":"DEE60","type":"exact"},{"name":"EIEE60","type":"exact"},{"name":"developmental and epileptic encephalopathy 60","type":"exact"},{"name":"epileptic encephalopathy, early infantile, 60","type":"exact"}],"termid":"MONDO:0033369","xrefs":{"Monarch":{"xref_id":"0033369"}}}


id: PBO:0072264
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S21 pseudogene 2","termid":"PBO:0072264"}


id: PBO:0074319
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"SMAD family member 9","termid":"PBO:0074319"}


id: PBO:0066146
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RBBP4 pseudogene 2","termid":"PBO:0066146"}


id: GO:0044319
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The migration of a cell along or through a wound gap that contributes to the reestablishment of a continuous surface.","definition_xrefs":["GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell migration","termid":"GO:0016477"},{"relation_name":"part_of","term_name":"epiboly involved in wound healing","termid":"GO:0090505"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"wound healing, spreading of cells","synonyms":[{"name":"cell migration involved in wound healing epiboly","type":"exact"}],"termid":"GO:0044319"}


id: FYPO:0002762
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A phenotype in which a spore germinates to produce an inviable cell that does not divide, and that is shaped in the form of a spheroid. In spheroid cells, there is much less difference between the long and short axes of the cell than in wild type.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inviable after spore germination, without cell division","termid":"FYPO:0001991"},{"relation_name":"is_a","term_name":"inviable spheroid vegetative cell","termid":"FYPO:0002482"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"has_part","termid":"FYPO:0001985"},{"rel_name":"has_part","termid":"FYPO:0000004"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"has_part","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000005"},{"rel_name":"has_part","termid":"FYPO:0000005"}],"interesting_parent_ids":["FYPO:0000004","FYPO:0001985","FYPO:0000002","FYPO:0000005","FYPO:0001320"],"is_obsolete":false,"name":"inviable after spore germination, without cell division, spheroid cell","synonyms":[{"name":"inviable after spore germination, undivided spheroid cell","type":"exact"},{"name":"inviable following spore germination, without cell division, spheroid cell","type":"exact"},{"name":"inviable germinated spore, without cell division, spheroid cell","type":"exact"},{"name":"lethal after spore germination, without cell division, spheroid cell","type":"exact"}],"termid":"FYPO:0002762"}


id: GO:0070784
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that modulates the frequency, rate or extent of the process in which cells remain attached after division and form thread-like filaments that may penetrate into a solid growth medium.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of filamentous growth of a population of unicellular organisms","termid":"GO:1900428"},{"relation_name":"regulates","term_name":"growth of unicellular organism as a thread of attached cells","termid":"GO:0070783"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"regulation of growth of unicellular organism as a thread of attached cells","termid":"GO:0070784"}


id: GO:0032272
data:
  {"annotated_genes":["SJAG_01993","SJAG_00279","SJAG_02700","SJAG_01894"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[82131,94334,81082,77494],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0051016"}]},"cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the process of creating protein polymers.","definition_xrefs":["GOC:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"negative regulation of protein-containing complex assembly","termid":"GO:0031333"},{"relation_name":"is_a","term_name":"regulation of protein polymerization","termid":"GO:0032271"},{"relation_name":"negatively_regulates","term_name":"protein polymerization","termid":"GO:0051258"}],"gene_count":4,"genes_by_uniquename":{"SJAG_00279":null,"SJAG_01894":null,"SJAG_01993":null,"SJAG_02700":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0065003"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0065003"},{"rel_name":"regulates","termid":"GO:0044085"}],"interesting_parent_ids":["GO:0065003","GO:0008150","GO:0044085"],"is_obsolete":false,"name":"negative regulation of protein polymerization","references_by_uniquename":{"GO_REF:0000033":null,"GO_REF:0000107":null},"synonyms":[{"name":"down regulation of protein polymerization","type":"exact"},{"name":"down-regulation of protein polymerization","type":"exact"},{"name":"downregulation of protein polymerization","type":"exact"},{"name":"inhibition of protein polymerization","type":"narrow"}],"termid":"GO:0032272","terms_by_termid":{"GO:0051016":null}}


id: PBO:0072211
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ribosomal protein S18 pseudogene 10","termid":"PBO:0072211"}


id: MONDO:0859082
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"inherited thrombophilia","termid":"MONDO:0100240"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"thrombophilia, X-linked, due to factor 8 defect","secondary_identifiers":["OMIM:301071","UMLS:C5676879","MEDGEN:1805414"],"termid":"MONDO:0859082","xrefs":{"Monarch":{"xref_id":"0859082"}}}


id: FYPO:0003567
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which the insertion of the mitotic spindle pole body localization into the nuclear envelope is abnormal.","definition_xrefs":["PMID:19942852","PomBase:mah","GO:0140480","PMID:24963130"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal mitotic spindle pole body localization","termid":"FYPO:0000534"},{"relation_name":"is_a","term_name":"abnormal mitotic cell cycle process","termid":"FYPO:0002737"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0005447"},{"rel_name":"is_a","termid":"FYPO:0000631"},{"rel_name":"is_a","termid":"FYPO:0000138"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320","FYPO:0000631"],"is_obsolete":false,"name":"abnormal mitotic spindle pole body insertion into nuclear envelope","secondary_identifiers":["FYPO:0006595"],"synonyms":[{"name":"abnormal establishment of spindle pole body localization to nuclear envelope","type":"exact"},{"name":"abnormal mitotic SPB insertion into nuclear envelope","type":"exact"},{"name":"abnormal mitotic spindle pole body insertion into nuclear envelope during vegetative growth","type":"exact"},{"name":"abnormal mitotic spindle pole body localization to nuclear envelope","type":"related"},{"name":"abnormal spindle pole body insertion into nuclear envelope during mitotic cell cycle","type":"related"}],"termid":"FYPO:0003567"}


id: GO:0047985
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: H2 + NAD+ = H+ + NADH.","definition_xrefs":["MetaCyc:HYDROGEN-DEHYDROGENASE-RXN","EC:1.12.1.2"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oxidoreductase activity, acting on hydrogen as donor, NAD or NADP as acceptor","termid":"GO:0016696"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0016491","GO:0003674","GO:0003824"],"is_obsolete":false,"name":"hydrogen dehydrogenase activity","secondary_identifiers":["RHEA:24636"],"synonyms":[{"name":"H(2):NAD(+) oxidoreductase activity","type":"related"},{"name":"H2:NAD+ oxidoreductase activity","type":"related"},{"name":"NAD-linked hydrogenase activity","type":"related"},{"name":"bidirectional hydrogenase activity","type":"broad"},{"name":"hydrogen:NAD+ oxidoreductase activity","type":"related"},{"name":"hydrogenase activity","type":"broad"}],"termid":"GO:0047985"}


id: GO:0042781
data:
  {"annotated_genes":["SJAG_04885","SJAG_00997"],"annotation_feature_type":"gene","cv_annotations":{"molecular_function":[{"annotations":[72021,82339],"is_not":false,"summary":null,"term":"GO:0042781"}]},"cv_name":"molecular_function","definition":"Catalysis of the endonucleolytic cleavage of RNA, removing extra 3' nucleotides from tRNA precursor, generating 3' termini of tRNAs. A 3'-hydroxy group is left at the tRNA terminus and a 5'-phosphoryl group is left at the trailer molecule.","definition_xrefs":["EC:3.1.26.11","PMID:12032089","PMID:21208191"],"direct_ancestors":[{"relation_name":"is_a","term_name":"tRNA-specific ribonuclease activity","termid":"GO:0004549"},{"relation_name":"is_a","term_name":"RNA endonuclease activity producing 5'-phosphomonoesters, hydrolytic mechanism","termid":"GO:0016891"}],"gene_count":2,"genes_by_uniquename":{"SJAG_00997":null,"SJAG_04885":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0140098"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016788"},{"rel_name":"is_a","termid":"GO:0140101"}],"interesting_parent_ids":["GO:0140098","GO:0003824","GO:0140101","GO:0003674","GO:0016787","GO:0016788"],"is_obsolete":false,"name":"3'-tRNA processing endoribonuclease activity","references_by_uniquename":{"GO_REF:0000033":null},"secondary_identifiers":["MetaCyc:3.1.26.11-RXN"],"synonyms":[{"name":"3 tRNase activity","type":"related"},{"name":"3' tRNA processing endoribonuclease activity","type":"exact"},{"name":"3' tRNase activity","type":"exact"},{"name":"RNase Z activity","type":"broad"},{"name":"ribonuclease Z activity","type":"broad"},{"name":"tRNA 3 endonuclease activity","type":"related"},{"name":"tRNA 3' endonuclease activity","type":"exact"},{"name":"tRNAse Z","type":"related"}],"termid":"GO:0042781","terms_by_termid":{"GO:0042781":null}}


id: MONDO:0037744
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neoplasm of jaw","termid":"MONDO:0021580"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"neoplasm of retromolar area","secondary_identifiers":["MEDGEN:577022","SCTID:126804008","UMLS:C0345590"],"synonyms":[{"name":"neoplasm of retromolar area","type":"exact"},{"name":"tumor of retromolar area","type":"related"},{"name":"tumour of retromolar area","type":"related"}],"termid":"MONDO:0037744","xrefs":{"Monarch":{"xref_id":"0037744"}}}


id: GO:0098740
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. Cell adhesion that involves cells from multiple organisms or that is mediated by gene products from multiple organisms.","definition_xrefs":["GOC:dos"],"gene_count":0,"genotype_count":0,"name":"obsolete multi organism cell adhesion (obsolete GO:0098740)","termid":"GO:0098740"}


id: PBO:0043776
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"carboxypeptidase A2","termid":"PBO:0043776"}


id: GO:1904916
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The directed movement of L-lysine from the lysosomal lumen across the lysosomal membrane and into the cytosol.","definition_xrefs":["GO_REF:0000078","GOC:kmv","GOC:TermGenie","PMID:22822152"],"direct_ancestors":[{"relation_name":"is_a","term_name":"L-lysine transmembrane export from vacuole","termid":"GO:0089707"},{"relation_name":"is_a","term_name":"transmembrane transport from lysosomal lumen to cytosol","termid":"GO:0170063"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0055085"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"is_a","termid":"GO:0006810"},{"rel_name":"is_a","termid":"GO:0051179"}],"interesting_parent_ids":["GO:0051179","GO:0006810","GO:0008150","GO:0055085"],"is_obsolete":false,"name":"L-lysine transmembrane transport from lysosomal lumen to cytosol","synonyms":[{"name":"transmembrane L-lysine transport from lysosomal lumen to cytosol","type":"exact"}],"termid":"GO:1904916"}


id: PBO:0002695
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"rRNA processing protein Rrp16 (predicted)","termid":"PBO:0002695"}


id: PBO:0056619
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"methyl-CpG binding protein 2","termid":"PBO:0056619"}


id: FYPO:0000085
data:
  {"alleles_by_uniquename":{"SJAG_00364:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00364","name":"rad3delta","uniquename":"SJAG_00364:allele-1"},"SJAG_00429:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_00429","name":"rad26delta","uniquename":"SJAG_00429:allele-1"},"SJAG_01205:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01205","name":"crb2delta","uniquename":"SJAG_01205:allele-1"},"SJAG_01410:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01410","name":"rad51delta","uniquename":"SJAG_01410:allele-1"},"SJAG_01605:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01605","name":"rad9delta","uniquename":"SJAG_01605:allele-1"},"SJAG_01680:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01680","name":"chk1delta","uniquename":"SJAG_01680:allele-1"},"SJAG_04671:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_04671","name":"mrc1delta","uniquename":"SJAG_04671:allele-1"}},"annotation_feature_type":"genotype","cv_annotations":{"multi_locus_phenotype":[{"annotations":[121200],"is_not":false,"summary":null,"term":"FYPO:0000085"}],"single_locus_phenotype":[{"annotations":[121198,121199,121204,121205,121206,121358,121359,121360],"is_not":false,"summary":null,"term":"FYPO:0000085"}]},"cv_name":"fission_yeast_phenotype","definition":"A phenotype observed in the vegetative growth phase of the life cycle in which cells show increased sensitivity to camptothecin. Cells stop growing (and may die) at a concentration of camptothecin that allows wild type cells to grow.","definition_xrefs":["PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"sensitive to DNA damaging agents","termid":"FYPO:0000266"}],"gene_count":7,"genes_by_uniquename":{"SJAG_00364":null,"SJAG_00429":null,"SJAG_01205":null,"SJAG_01410":null,"SJAG_01605":null,"SJAG_01680":null,"SJAG_04671":null},"genotype_count":8,"genotypes_by_uniquename":{"chk1delta":{"display_name":"chk1delta","display_uniquename":"chk1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]}]},"chk1delta__crb2delta":{"display_name":"chk1delta crb2delta","display_uniquename":"chk1delta__crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01680:allele-1","expression":"Null"}]},{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"crb2delta":{"display_name":"crb2delta","display_uniquename":"crb2delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01205:allele-1","expression":"Null"}]}]},"mrc1delta":{"display_name":"mrc1delta","display_uniquename":"mrc1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_04671:allele-1","expression":"Null"}]}]},"rad26delta":{"display_name":"rad26delta","display_uniquename":"rad26delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00429:allele-1","expression":"Null"}]}]},"rad3delta":{"display_name":"rad3delta","display_uniquename":"rad3delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_00364:allele-1","expression":"Null"}]}]},"rad51delta":{"display_name":"rad51delta","display_uniquename":"rad51delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01410:allele-1","expression":"Null"}]}]},"rad9delta":{"display_name":"rad9delta","display_uniquename":"rad9delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01605:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000003"},{"rel_name":"is_a","termid":"FYPO:0000139"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0002683"},{"rel_name":"is_a","termid":"FYPO:0005447"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0000003","FYPO:0002683","FYPO:0000139","FYPO:0005447"],"is_obsolete":false,"multi_locus_annotated_genes":["SJAG_01680","SJAG_01205"],"name":"sensitive to camptothecin","references_by_uniquename":{"PMID:20368354":null,"PMID:23090706":null},"single_locus_annotated_genes":["SJAG_01680","SJAG_01605","SJAG_01205","SJAG_04671","SJAG_00364","SJAG_00429","SJAG_01410"],"single_locus_genotype_uniquenames":["chk1delta","mrc1delta","rad3delta","crb2delta","rad26delta","rad9delta","rad51delta"],"synonyms":[{"name":"hypersensitive to camptothecin","type":"exact"},{"name":"sensitive to CPT","type":"exact"},{"name":"sensitive to camptothecin during mitotic cell cycle","type":"related"},{"name":"sensitive to camptothecin during vegetative growth","type":"exact"}],"termid":"FYPO:0000085","terms_by_termid":{"FYECO:0000005":null,"FYECO:0000137":null,"FYECO:0000314":null,"FYPO:0000085":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: GO:0140088
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the reaction: acetaldehyde + NADP+ + H2O = acetate + NADPH + 2 H+.","definition_xrefs":["PMID:15659684","RHEA:25298","PMID:9473035"],"direct_ancestors":[{"relation_name":"is_a","term_name":"aldehyde dehydrogenase (NADP+) activity","termid":"GO:0033721"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0016491"},{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"}],"interesting_parent_ids":["GO:0003824","GO:0003674","GO:0016491"],"is_obsolete":false,"name":"acetaldehyde dehydrogenase (NADP+) activity","termid":"GO:0140088"}


id: PBO:0038518
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ABCF2-H2BK1 readthrough","termid":"PBO:0038518"}


id: GO:0060676
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The developmental process pertaining to the initial formation of the ureteric bud from the Wolffian duct. This process begins when the bud protrudes from the duct and ends when it is a recognizable bud.","definition_xrefs":["PMID:16916378","GOC:dph"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mesonephric tubule formation","termid":"GO:0072172"},{"relation_name":"part_of","term_name":"ureteric bud morphogenesis","termid":"GO:0060675"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"ureteric bud formation","secondary_identifiers":["Reactome:R-HSA-9830674"],"termid":"GO:0060676"}


id: PBO:0110198
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial tRNA (guanine-N2-)-methyltransferase Trm1.1","termid":"PBO:0110198"}


id: PBO:0053747
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"long intergenic non-protein coding RNA 974","termid":"PBO:0053747"}


id: PBO:0086116
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein required for cytoplasm to vacuole targeting of proteins; forms a complex with Far3p and Far7p to Far11p involved in recovery from pheromone-induced cell cycle arrest; mutant has increased aneuploidy tolerance; VPS64 has a paralog, FAR10, that arose from the whole genome duplication","termid":"PBO:0086116"}


id: PBO:0034440
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-increased_duration_of_Rad52_focus_presence_during_cellular_response_to_ionizing_radiation","termid":"PBO:0034440"}


id: GO:0030719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"A process that is carried out at the cellular level which results in the assembly, arrangement of constituent parts, or disassembly of polar granules, cytoplasmic, non-membranous RNA/protein complex aggregates in the primordial germ cells of many higher eukaryotes.","definition_xrefs":["PMID:10851135","PMID:770367"],"direct_ancestors":[{"relation_name":"is_a","term_name":"organelle organization","termid":"GO:0006996"},{"relation_name":"part_of","term_name":"pole plasm assembly","termid":"GO:0007315"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0044085","GO:0008150"],"is_obsolete":false,"name":"P granule organization","secondary_identifiers":["GO:0048114"],"synonyms":[{"name":"P granule organization and biogenesis","type":"related"},{"name":"polar granule organisation","type":"exact"},{"name":"polar granule organization and biogenesis","type":"exact"}],"termid":"GO:0030719"}


id: PBO:0065627
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"protein tyrosine phosphatase non-receptor type 5","termid":"PBO:0065627"}


id: MONDO:0012994
data:
  {"annotated_genes":["SJAG_03098"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[87428],"is_not":false,"summary":null,"term":"MONDO:0012994"}]},"cv_name":"mondo","definition":"Dopa responsive dystonia (DRD) due to sepiapterin reductase deficiency (SRD) is a very rare neurometabolic disorder characterized by dystonia with diurnal fluctuations, axial hypotonia, oculogyric crises, and delays in motor and cognitive development.","definition_xrefs":["Orphanet:70594"],"direct_ancestors":[{"relation_name":"is_a","term_name":"dopa-responsive dystonia","termid":"MONDO:0016812"},{"relation_name":"is_a","term_name":"inherited dystonia","termid":"MONDO:0044807"},{"relation_name":"is_a","term_name":"tetrahydrobiopterin metabolic process disease","termid":"MONDO:0045014"}],"gene_count":1,"genes_by_uniquename":{"SJAG_03098":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0003441"},{"rel_name":"is_a","termid":"MONDO:0005066"},{"rel_name":"is_a","termid":"MONDO:0004736"}],"interesting_parent_ids":["MONDO:0005066","MONDO:0003441","MONDO:0004736"],"is_obsolete":false,"name":"dopa-responsive dystonia due to sepiapterin reductase deficiency","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["UMLS:C0268468","MESH:C562657","NORD:1885","MEDGEN:120642","DOID:0111168","NANDO:1200982","GARD:10365","ICD9:277.89","OMIM:612716","SCTID:45116002"],"synonyms":[{"name":"DRD due to SRD","type":"exact"},{"name":"DYT-SPR","type":"exact"},{"name":"SPR deficiency","type":"exact"},{"name":"SRD","type":"exact"},{"name":"Sepiapterin Reductase Deficiency","type":"exact"},{"name":"autosomal recessive sepiapterin reductase-deficient DRD","type":"exact"},{"name":"dopa-responsive dystonia due to sepiapterin reductase deficiency","type":"exact"},{"name":"dystonia, DOPA-responsive, due to sepiapterin reductase deficiency","type":"related"},{"name":"sepiapterin reductase deficiency","type":"exact"}],"termid":"MONDO:0012994","terms_by_termid":{"MONDO:0012994":null},"xrefs":{"Monarch":{"xref_id":"0012994"}}}


id: GO:0030305
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Catalysis of the cleavage of heparan sulfate; can degrade both heparan sulfate and heparin glycosaminoglycan chains.","definition_xrefs":["PMID:10916150"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hydrolase activity, hydrolyzing O-glycosyl compounds","termid":"GO:0004553"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0003824"},{"rel_name":"is_a","termid":"GO:0016787"},{"rel_name":"is_a","termid":"GO:0016798"}],"interesting_parent_ids":["GO:0016798","GO:0016787","GO:0003824","GO:0003674"],"is_obsolete":false,"name":"heparanase activity","secondary_identifiers":["Reactome:R-HSA-1667005"],"synonyms":[{"name":"heparinase activity","type":"related"}],"termid":"GO:0030305"}


id: PBO:0051143
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"immunoglobulin heavy variable 3-21","termid":"PBO:0051143"}


id: PBO:0002160
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cAMP-dependent protein kinase regulatory subunit Cgs1","termid":"PBO:0002160"}


id: GO:1905669
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The aggregation, arrangement and bonding together of a set of components to form a TORC1 complex.","definition_xrefs":["GOC:kmv","GOC:TermGenie","PMID:21952218","GO_REF:0000079"],"direct_ancestors":[{"relation_name":"is_a","term_name":"protein-containing complex assembly","termid":"GO:0065003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"part_of","termid":"GO:0044085"},{"rel_name":"is_a","termid":"GO:0065003"}],"interesting_parent_ids":["GO:0044085","GO:0065003","GO:0008150"],"is_obsolete":false,"name":"TORC1 complex assembly","synonyms":[{"name":"TOR complex 1 assembly","type":"exact"},{"name":"TOR complex 1 formation","type":"exact"},{"name":"TORC 1 complex assembly","type":"exact"},{"name":"TORC 1 complex formation","type":"exact"},{"name":"TORC1 assembly","type":"exact"},{"name":"TORC1 complex formation","type":"exact"},{"name":"TORC1 formation","type":"exact"},{"name":"dTOR/dRaptor complex assembly","type":"narrow"},{"name":"dTOR/dRaptor complex formation","type":"narrow"},{"name":"dTORC1 assembly","type":"narrow"},{"name":"dTORC1 formation","type":"narrow"},{"name":"mTORC1 assembly","type":"narrow"},{"name":"mTORC1 formation","type":"narrow"},{"name":"nutrient sensitive complex assembly","type":"exact"},{"name":"nutrient sensitive complex formation","type":"exact"},{"name":"rapamycin and nutrient-sensitive TOR complex assembly","type":"exact"},{"name":"rapamycin and nutrient-sensitive TOR complex formation","type":"exact"}],"termid":"GO:1905669"}


id: MONDO:0958258
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"ACTH-independent Cushing syndrome","termid":"MONDO:0020529"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Cushing syndrome due to cortisol-producing adrenocortical adenoma","secondary_identifiers":["UMLS:C5816799","MEDGEN:1853161","Orphanet:642788"],"termid":"MONDO:0958258","xrefs":{"Monarch":{"xref_id":"0958258"}}}


id: PATO:0001474
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"An oriented quality inhering in a bearer by virtue of the bearer's axis being positioned forward.","definition_xrefs":["bdid:bdid"],"direct_ancestors":[{"relation_name":"is_a","term_name":"oriented","termid":"PATO:0000614"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"anteverted","termid":"PATO:0001474"}


id: PBO:0018049
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Sirtuin family histone deacetylase Sir2","termid":"PBO:0018049"}


id: GO:0043196
data:
  {"annotation_feature_type":"gene","cv_name":"cellular_component","definition":"Non-terminal inflated portion of the axon, containing the specialized apparatus necessary to release neurotransmitters.","definition_xrefs":["GOC:nln"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cellular anatomical structure","termid":"GO:0110165"},{"relation_name":"part_of","term_name":"main axon","termid":"GO:0044304"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0005575"}],"interesting_parent_ids":["GO:0005575"],"is_obsolete":false,"name":"varicosity","termid":"GO:0043196"}


id: MONDO:0043475
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An episode of sudden and transient loss of consciousness sometimes associated with seizures. It is caused by a sudden decrease of the cardiac output that results from a sudden cardiac dysrhythmia. Typically patients develop an initial pallor, followed by facial flush during recovery.","definition_xrefs":["NCIT:C79765"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"atrioventricular dissociation","termid":"MONDO:0008848"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Adams-Stokes syndrome","secondary_identifiers":["UMLS:C0001396","SCTID:46935006","MESH:D000219","MEDGEN:1741"],"synonyms":[{"name":"Adam Stokes attacks","type":"related"},{"name":"Adam-Stokes attacks","type":"related"},{"name":"Adams Stokes syndrome","type":"related"},{"name":"Stokes Adams attacks","type":"related"},{"name":"Stokes Adams syndrome","type":"related"},{"name":"Stokes-Adams attacks","type":"related"},{"name":"Stokes-Adams syndrome","type":"exact"},{"name":"Stokes-Adams-morgagni syndrome","type":"related"},{"name":"attacks, Adam-Stokes","type":"related"},{"name":"attacks, Stokes-Adams","type":"related"},{"name":"syndrome, Adams-Stokes","type":"related"},{"name":"syndrome, Stokes-Adams","type":"related"}],"termid":"MONDO:0043475","xrefs":{"Monarch":{"xref_id":"0043475"}}}


id: MONDO:0001987
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodegenerative disease","termid":"MONDO:0005559"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005559"}],"interesting_parent_ids":["MONDO:0005559"],"is_obsolete":false,"name":"senile degeneration of brain","secondary_identifiers":["MEDGEN:509626","UMLS:C0154669","DOID:14524","SCTID:45864009","ICD9:331.2"],"synonyms":[{"name":"Senile brain degen.","type":"exact"}],"termid":"MONDO:0001987","xrefs":{"Monarch":{"xref_id":"0001987"}}}


id: PBO:0086855
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Putative RNA-binding protein; interacts with Mex67p, which is a component of the nuclear pore involved in nuclear mRNA export; MIP6 has a paralog, PES4, that arose from the whole genome duplication","termid":"PBO:0086855"}


id: PBO:0067850
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 152","termid":"PBO:0067850"}


id: PBO:0061928
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"olfactory receptor family 1 subfamily J member 2","termid":"PBO:0061928"}


id: GO:0042532
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that stops, prevents, or reduces the frequency, rate or extent of the introduction of a phosphate group to a tyrosine residue of a STAT (Signal Transducer and Activator of Transcription) protein.","definition_xrefs":["PMID:11426647","GOC:jl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of tyrosine phosphorylation of STAT protein","termid":"GO:0042509"},{"relation_name":"is_a","term_name":"negative regulation of receptor signaling pathway via JAK-STAT","termid":"GO:0046426"},{"relation_name":"is_a","term_name":"negative regulation of peptidyl-tyrosine phosphorylation","termid":"GO:0050732"},{"relation_name":"negatively_regulates","term_name":"tyrosine phosphorylation of STAT protein","termid":"GO:0007260"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0023052"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"regulates","termid":"GO:0023052"}],"interesting_parent_ids":["GO:0023052","GO:0008150"],"is_obsolete":false,"name":"negative regulation of tyrosine phosphorylation of STAT protein","secondary_identifiers":["GO:0042518","GO:0042514","GO:0042527","GO:0042524","GO:0042512","GO:0042521","GO:0042530"],"synonyms":[{"name":"down regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"down-regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"down-regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of STAT protein","type":"exact"},{"name":"downregulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"downregulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of STAT protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"inhibition of tyrosine phosphorylation of Stat7 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat1 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat2 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat3 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat4 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat5 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat6 protein","type":"narrow"},{"name":"negative regulation of tyrosine phosphorylation of Stat7 protein","type":"narrow"}],"termid":"GO:0042532"}


id: PBO:0015666
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"mitochondrial NADH dehydrogenase (ubiquinone)(predicted)","termid":"PBO:0015666"}


id: GO:0090719
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"An adaptive immune effector response involving T cells and B lineage cells. In the case of B lineage cells, the effector cells are the antibody secreting plasma cells whereas for T cells the effector cells may be helper T cells or cytotoxic T cells.","definition_xrefs":["ISBN:1405196831","GOC:add"],"direct_ancestors":[{"relation_name":"is_a","term_name":"adaptive immune response based on somatic recombination of immune receptors built from immunoglobulin superfamily domains","termid":"GO:0002460"},{"relation_name":"is_a","term_name":"adaptive immune effector response","termid":"GO:0090718"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"adaptive immune effector response involving T cells and B lineage cells","termid":"GO:0090719"}


id: PBO:0028004
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-normal_mitotic_chromosome_condensation","termid":"PBO:0028004"}


id: PBO:0085735
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"Protein involved in threonylcarbamoyl adenosine biosynthesis; Sua5p and Qri7p are necessary and sufficient for RNA t6A modification in vitro; null mutant lacks N6-threonylcarbamoyl adenosine (t6A) modification in the anticodon loop of ANN-decoding tRNA; member of conserved YrdC/Sua5 family; binds single-stranded telomeric DNA and null mutant has abnormal telomere length","termid":"PBO:0085735"}


id: PBO:0040314
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATP synthase F1 subunit alpha pseudogene 8","termid":"PBO:0040314"}


id: PATO:0001125
data:
  {"annotation_feature_type":"gene","cv_name":"quality","gene_count":0,"genotype_count":0,"name":"OBSOLETE PATO:0001125 absolute pressure value (obsolete PATO:0001125)","termid":"PATO:0001125"}


id: GO:0097241
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The orderly movement of a hematopoietic stem cell into the bone marrow, and its subsequent positioning within defined functional compartments in that microenvironment. A hematopoietic stem cell is a cell from which all cells of the lymphoid and myeloid lineages develop, including blood cells and cells of the immune system.","definition_xrefs":["PMID:17368745","CL:0000037","GOC:yaf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"hematopoietic stem cell migration","termid":"GO:0035701"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"hematopoietic stem cell migration to bone marrow","synonyms":[{"name":"hematopoietic stem cell homing","type":"broad"},{"name":"hemopoietic stem cell migration to bone marrow","type":"exact"},{"name":"progenitor cell homing","type":"broad"}],"termid":"GO:0097241"}


id: PBO:0089728
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cell wall beta-glucosidase Psu2","termid":"PBO:0089728"}


id: PBO:0074898
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nucleolar RNA, C/D box 72","termid":"PBO:0074898"}


id: MONDO:0016214
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Pulmonary fibrosis - hepatic hyperplasia - bone marrow hypoplasia, also named Btrimorphic syndromeB (i.e. three (inherited) morbidities, pulmonary, hepatic and cytopenia), is a rare disease reported in 4 cases to date, manifesting with idiopathic pulmonary fibrosis, hepatic nodular regenerative hyperplasia leading to portal hypertension and thrombocytopenia due to bone marrow hypoplasia. The condition was associated with 100% mortality.","definition_xrefs":["Orphanet:210136"],"direct_ancestors":[{"relation_name":"is_a","term_name":"interstitial lung disease","termid":"MONDO:0015925"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"pulmonary fibrosis-hepatic hyperplasia-bone marrow hypoplasia syndrome","secondary_identifiers":["MEDGEN:1385709","GARD:20449","UMLS:C4510085"],"termid":"MONDO:0016214","xrefs":{"Monarch":{"xref_id":"0016214"}}}


id: PBO:0044056
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"cystatin SA pseudogene 1","termid":"PBO:0044056"}


id: GO:0051594
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The series of events in which a glucose stimulus is received by a cell and converted into a molecular signal.","definition_xrefs":["GOC:ai"],"direct_ancestors":[{"relation_name":"is_a","term_name":"detection of hexose stimulus","termid":"GO:0009732"},{"relation_name":"is_a","term_name":"response to glucose","termid":"GO:0009749"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"detection of glucose","synonyms":[{"name":"glucose detection","type":"exact"},{"name":"glucose perception","type":"related"},{"name":"glucose sensing","type":"related"}],"termid":"GO:0051594"}


id: GO:0018379
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The linkage of cytochromes and other heme proteins to heme via heme-bis-L-cysteine.","definition_xrefs":["RESID:AA0134"],"gene_count":0,"genotype_count":0,"name":"obsolete cytochrome c-heme linkage via heme-bis-L-cysteine (obsolete GO:0018379)","synonyms":[{"name":"cytochrome c-haem linkage via haem-bis-L-cysteine","type":"exact"}],"termid":"GO:0018379"}


id: MONDO:0017372
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Fetal varicella syndrome (CVS) is an acquired developmental anomaly syndrome characterized by skin, neurological, ocular, limbs and growth defects secondary to maternal Varicella-Zoster Virus (VZV) infection.","definition_xrefs":["Orphanet:291"],"direct_ancestors":[{"relation_name":"is_a","term_name":"syndromic disease","termid":"MONDO:0002254"},{"relation_name":"is_a","term_name":"viral infectious disease","termid":"MONDO:0005108"},{"relation_name":"is_a","term_name":"infectious embryofetopathy","termid":"MONDO:0016511"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"congenital varicella syndrome","secondary_identifiers":["GARD:45","icd11.foundation:2071159826","MEDGEN:87473","NCIT:C116800","SCTID:277644009","NORD:1003","UMLS:C0343560","ICD9:771.2"],"synonyms":[{"name":"Varicella embryopathy","type":"related"},{"name":"Varicella virus antenatal infection","type":"related"},{"name":"antenatal varicella virus infection","type":"exact"},{"name":"fetal effects of chickenpox","type":"related"},{"name":"fetal effects of varicella zoster virus","type":"related"},{"name":"fetal varicella infection","type":"related"},{"name":"fetal varicella zoster syndrome","type":"related"},{"name":"foetal effects of chickenpox","type":"related"},{"name":"foetal effects of varicella zoster virus","type":"related"},{"name":"foetal varicella infection","type":"related"},{"name":"foetal varicella zoster syndrome","type":"related"},{"name":"mother-to-child transmission of varicella syndrome","type":"exact"}],"termid":"MONDO:0017372","xrefs":{"Monarch":{"xref_id":"0017372"}}}


id: PBO:0049553
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"H2B clustered histone 15","termid":"PBO:0049553"}


id: PBO:0005418
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase family or domain","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"zf-DBF type","termid":"PBO:0005418"}


id: MONDO:0000084
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete pigmented nodular adrenocortical disease (obsolete MONDO:0000084)","termid":"MONDO:0000084","xrefs":{"Monarch":{"xref_id":"0000084"}}}


id: PBO:0075217
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"small nuclear ribonucleoprotein 13","termid":"PBO:0075217"}


id: PBO:0077079
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TIR domain containing adaptor molecule 2","termid":"PBO:0077079"}


id: PBO:0056350
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microtubule associated protein 7","termid":"PBO:0056350"}


id: GO:0015896
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"OBSOLETE. The directed movement of nalidixic acid into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore. Nalidixic acid is a synthetic antibiotic that interferes with DNA gyrase and inhibits prokaryotic replication.","definition_xrefs":["PMID:12702699","PubChem_Compound:4221","GOC:curators"],"gene_count":0,"genotype_count":0,"name":"obsolete nalidixic acid transport (obsolete GO:0015896)","termid":"GO:0015896"}


id: PATO:0002464
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A positional quality inhering in a bearer by virtue of some aspect of the bearer extending past the position of another entity.","definition_xrefs":["PATOC:WD"],"direct_ancestors":[{"relation_name":"is_a","term_name":"position","termid":"PATO:0000140"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"extends beyond","termid":"PATO:0002464"}


id: SO:0001223
data:
  {"annotation_feature_type":"gene","cv_name":"sequence","definition":"An attribute describing an epigenetic process where a gene is inactivated by histone deacetylation.","definition_xrefs":["RSC:cb"],"direct_ancestors":[{"relation_name":"is_a","term_name":"silenced_by_histone_modification","termid":"SO:0001221"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"silenced_by_histone_deacetylation","synonyms":[{"name":"silenced by histone deacetylation","type":"exact"}],"termid":"SO:0001223"}


id: GO:2000968
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that activates or increases the frequency, rate or extent of cell wall polysaccharide catabolic process.","definition_xrefs":["GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"positive regulation of catabolic process","termid":"GO:0009896"},{"relation_name":"is_a","term_name":"positive regulation of macromolecule metabolic process","termid":"GO:0010604"},{"relation_name":"is_a","term_name":"positive regulation of carbohydrate metabolic process","termid":"GO:0045913"},{"relation_name":"is_a","term_name":"regulation of cell wall polysaccharide catabolic process","termid":"GO:2000966"},{"relation_name":"positively_regulates","term_name":"cell wall polysaccharide catabolic process","termid":"GO:0044347"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"positively_regulates","termid":"GO:0005975"},{"rel_name":"regulates","termid":"GO:0005975"}],"interesting_parent_ids":["GO:0008150","GO:0005975"],"is_obsolete":false,"name":"positive regulation of cell wall polysaccharide catabolic process","synonyms":[{"name":"positive regulation of cell wall polysaccharide breakdown","type":"exact"}],"termid":"GO:2000968"}


id: PBO:0027010
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-inviable_elongated_mononucleate_aseptate_vegetative_cell_with_cell_cycle_arrest_in_mitotic_G2_phase","termid":"PBO:0027010"}


id: GO:1902780
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that results in a change in state or activity of a cell or an organism (in terms of movement, secretion, enzyme production, gene expression, etc.) as a result of a nonane stimulus.","definition_xrefs":["GO_REF:0000071","PMID:22958739","GOC:TermGenie","GOC:mengo_curators"],"direct_ancestors":[{"relation_name":"is_a","term_name":"response to alkane","termid":"GO:1902778"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"response to nonane","termid":"GO:1902780"}


id: PBO:0059935
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND2 pseudogene 21","termid":"PBO:0059935"}


id: MONDO:0012869
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any autosomal dominant non-syndromic intellectual disability in which the cause of the disease is a mutation in the ZBTB18 gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"autosomal dominant non-syndromic intellectual disability","termid":"MONDO:0015802"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0000426"}],"interesting_parent_ids":["MONDO:0000426"],"is_obsolete":false,"name":"intellectual disability, autosomal dominant 22","secondary_identifiers":["OMIM:612337","DOID:0070052","MESH:C567346"],"synonyms":[{"name":"MRD22","type":"exact"},{"name":"ZBTB18 autosomal dominant non-syndromic intellectual disability","type":"exact"},{"name":"autosomal dominant intellectual disability 22","type":"exact"},{"name":"autosomal dominant mental retardation 22","type":"exact"},{"name":"autosomal dominant non-syndromic intellectual disability 22","type":"related"},{"name":"autosomal dominant non-syndromic intellectual disability caused by mutation in ZBTB18","type":"exact"},{"name":"chromosome 1Q43-q44 deletion syndrome","type":"related"},{"name":"chromosome 1Qter deletion syndrome","type":"related"},{"name":"intellectual disability, autosomal dominant 22","type":"exact"},{"name":"intellectual disability, autosomal dominant type 22","type":"exact"},{"name":"mental retardation, autosomal dominant 22","type":"related"},{"name":"mental retardation, autosomal dominant type 22","type":"exact"}],"termid":"MONDO:0012869","xrefs":{"Monarch":{"xref_id":"0012869"}}}


id: GO:2000243
data:
  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id: FYPO:0004890
data:
  {"alleles_by_uniquename":{"SJAG_01834:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_01834","name":"pom152delta","uniquename":"SJAG_01834:allele-1"},"SJAG_03449:allele-1":{"allele_type":"deletion","description":"deletion","gene_uniquename":"SJAG_03449","name":"man1delta","uniquename":"SJAG_03449:allele-1"},"SJAG_03449:allele-2":{"allele_type":"partial_amino_acid_deletion","description":"man1DHEH","gene_uniquename":"SJAG_03449","name":"Man1DHEH","uniquename":"SJAG_03449:allele-2"},"SJAG_03449:allele-3":{"allele_type":"amino_acid_insertion_and_deletion","description":"man1-1-488","gene_uniquename":"SJAG_03449","name":"man1-1-488","uniquename":"SJAG_03449:allele-3"}},"annotation_feature_type":"genotype","cv_annotations":{"single_locus_phenotype":[{"annotations":[121218,121219,121220,121222],"is_not":false,"summary":null,"term":"FYPO:0004890"}]},"cv_name":"fission_yeast_phenotype","definition":"A physical cellular phenotype observed in the vegetative growth phase of the life cycle in which the distance between one or more telomeres and the nuclear envelope is greater than normal during mitosis.","definition_xrefs":["PMID:19948484","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"abnormal telomere-nuclear envelope distance during vegetative growth","termid":"FYPO:0004790"}],"gene_count":2,"genes_by_uniquename":{"SJAG_01834":null,"SJAG_03449":null},"genotype_count":4,"genotypes_by_uniquename":{"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type":{"display_name":"Man1DHEH(man1DHEH)","display_uniquename":"Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-2","expression":"Not assayed or wild type"}]}]},"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type":{"display_name":"man1-1-488(aa)","display_uniquename":"man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-3","expression":"Not assayed or wild type"}]}]},"man1delta":{"display_name":"man1delta","display_uniquename":"man1delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_03449:allele-1","expression":"Null"}]}]},"pom152delta":{"display_name":"pom152delta","display_uniquename":"pom152delta","loci":[{"expressed_alleles":[{"allele_uniquename":"SJAG_01834:allele-1","expression":"Null"}]}]}},"interesting_parent_details":[{"rel_name":"output_of","termid":"FYPO:0000138"},{"rel_name":"output_of","termid":"FYPO:0005447"},{"rel_name":"output_of","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0001985"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"output_of","termid":"FYPO:0001985"}],"interesting_parent_ids":["FYPO:0001985","FYPO:0005447","FYPO:0000002","FYPO:0000138","FYPO:0001320"],"is_obsolete":false,"name":"increased telomere-nuclear envelope distance during mitosis","references_by_uniquename":{"PMID:24184107":null},"single_locus_annotated_genes":["SJAG_03449","SJAG_01834"],"single_locus_genotype_uniquenames":["man1-1-488-man1-1-488-amino_acid_insertion_and_deletion-expression-not_assayed_or_wild_type","pom152delta","Man1DHEH-man1DHEH-partial_amino_acid_deletion-expression-not_assayed_or_wild_type","man1delta"],"synonyms":[{"name":"increased distance between telomeres and nuclear envelope during mitosis","type":"exact"},{"name":"increased telomere-nuclear envelope distance during mitosis during vegetative growth","type":"exact"},{"name":"increased telomere-nuclear envelope distance during mitotic nuclear division","type":"exact"}],"termid":"FYPO:0004890","terms_by_termid":{"FYPO:0004890":null,"FYPO_EXT:0000001":null,"FYPO_EXT:0000002":null}}


id: MONDO:0003078
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  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Retinoblastoma that has spread beyond the eye e.g. to brain, soft tissue/bone, bone marrow.","definition_xrefs":["NCIT:C7848"],"direct_ancestors":[{"relation_name":"is_a","term_name":"retinoblastoma","termid":"MONDO:0008380"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004992"},{"rel_name":"is_a","termid":"MONDO:0005328"}],"interesting_parent_ids":["MONDO:0004992","MONDO:0005328"],"is_obsolete":false,"name":"extraocular retinoblastoma","secondary_identifiers":["MEDGEN:75861","DOID:4656","UMLS:C0278719"],"synonyms":[{"name":"extraocular retinoblastoma","type":"exact"},{"name":"metastatic retinoblastoma","type":"exact"}],"termid":"MONDO:0003078","xrefs":{"Monarch":{"xref_id":"0003078"}}}


id: FYPO:0005074
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  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cell phenotype observed in the vegetative growth phase of the life cycle in which the amount of a protein measured in the anaphase-promoting complex is normal (i.e. indistinguishable from wild type).","definition_xrefs":["PMID:9264466","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal protein level during vegetative growth","termid":"FYPO:0000833"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0001320"},{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"}],"interesting_parent_ids":["FYPO:0001320","FYPO:0001312","FYPO:0000257","FYPO:0000002"],"is_obsolete":false,"name":"normal protein level in anaphase-promoting complex","synonyms":[{"name":"normal protein level in APC","type":"exact"}],"termid":"FYPO:0005074"}


id: MONDO:0011471
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory bowel disease that has material basis in variation in the chromosome region 6p21.3.","definition_xrefs":["DOID:0110891","PMID:10577918"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"},{"rel_name":"is_a","termid":"MONDO:0004335"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 3","secondary_identifiers":["OMIM:604519","UMLS:C1858303","MEDGEN:346785","MESH:C565764"],"synonyms":[{"name":"IBD3","type":"exact"},{"name":"inflammatory bowel disease 3","type":"exact"},{"name":"inflammatory bowel disease type 3","type":"exact"}],"termid":"MONDO:0011471","xrefs":{"Monarch":{"xref_id":"0011471"}}}


id: PBO:0087993
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"tRNA threonylcarbamoyladenosine dehydratase; required for the ct6A tRNA base modification, where an adenosine at position 37 is modified to form a cyclized active ester with an oxazolone ring; localized to the mitochondrial outer membrane; TCD2 has a paralog, TCD1, that arose from the whole genome duplication","termid":"PBO:0087993"}


id: MONDO:0016251
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete salivary gland type cancer of the breast (obsolete MONDO:0016251)","termid":"MONDO:0016251","xrefs":{"Monarch":{"xref_id":"0016251"}}}


id: GO:0097245
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Binding to a flavanol.","definition_xrefs":["GOC:sl"],"direct_ancestors":[{"relation_name":"is_a","term_name":"flavonoid binding","termid":"GO:0097243"},{"relation_name":"is_a","term_name":"heterocyclic compound binding","termid":"GO:1901363"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0005488"}],"interesting_parent_ids":["GO:0003674","GO:0005488"],"is_obsolete":false,"name":"flavanol binding","synonyms":[{"name":"flavan-3-ol binding","type":"narrow"}],"termid":"GO:0097245"}


id: PBO:0030307
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-mislocalized_septum,_near_new_end","termid":"PBO:0030307"}


id: FYPO:0007301
data:
  {"annotation_feature_type":"genotype","cv_name":"fission_yeast_phenotype","definition":"A cellular process phenotype observed in the vegetative growth phase of the life cycle in which protein aggregate center formation is normal (i.e. indistinguishable from wild type). Protein aggregate centers are composed of chaperones and misfolded proteins, and are reversibly formed in the nucleus and cytosol to shield thermosensitive proteins from degradation until conditions allow disaggregation and refolding.","definition_xrefs":["PMID:32075773","PomBase:mah"],"direct_ancestors":[{"relation_name":"is_a","term_name":"normal cellular process during vegetative growth","termid":"FYPO:0001319"},{"relation_name":"is_a","term_name":"normal cellular component organization","termid":"FYPO:0006003"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"FYPO:0000002"},{"rel_name":"is_a","termid":"FYPO:0001312"},{"rel_name":"is_a","termid":"FYPO:0000257"},{"rel_name":"is_a","termid":"FYPO:0001320"}],"interesting_parent_ids":["FYPO:0000257","FYPO:0001320","FYPO:0000002","FYPO:0001312"],"is_obsolete":false,"name":"normal protein aggregate center formation","synonyms":[{"name":"normal PAC formation","type":"exact"},{"name":"normal protein aggregate center formation during mitotic cell cycle","type":"related"},{"name":"normal protein aggregate center formation during vegetative growth","type":"exact"},{"name":"normal protein aggregate centre formation","type":"exact"}],"termid":"FYPO:0007301"}


id: MONDO:0014452
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Familial dysfibrinogenemia is a coagulation disorder characterized by a bleeding tendency due to a functional anomaly of circulating fibrinogen.","definition_xrefs":["Orphanet:98881"],"direct_ancestors":[{"relation_name":"is_a","term_name":"congenital fibrinogen deficiency","termid":"MONDO:0018060"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005570"}],"interesting_parent_ids":["MONDO:0005570"],"is_obsolete":false,"name":"familial dysfibrinogenemia","secondary_identifiers":["NCIT:C131659","ICD9:286.3","GARD:2004","OMIM:616004","MEDGEN:82901","SCTID:111589005","UMLS:C0272350"],"synonyms":[{"name":"congenital dysfibrinogenemia","type":"related"},{"name":"dysfibrinogenemia","type":"exact"},{"name":"dysfibrinogenemia, congenital","type":"related"},{"name":"dysfibrinogenemia, familial","type":"related"},{"name":"familial dysfibrinogenemia","type":"exact"},{"name":"hypodysfibrinogenemia","type":"exact"},{"name":"hypodysfibrinogenemia, congenital","type":"related"}],"termid":"MONDO:0014452","xrefs":{"Monarch":{"xref_id":"0014452"}}}


id: PBO:0076614
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"TBC1 domain family member 32","termid":"PBO:0076614"}


id: GO:0048808
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which the anatomical structures of male genitalia are generated and organized.","definition_xrefs":["GOC:ems","ISBN:0140512888"],"direct_ancestors":[{"relation_name":"is_a","term_name":"genitalia morphogenesis","termid":"GO:0035112"},{"relation_name":"is_a","term_name":"male anatomical structure morphogenesis","termid":"GO:0090598"},{"relation_name":"part_of","term_name":"male genitalia development","termid":"GO:0030539"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"male genitalia morphogenesis","synonyms":[{"name":"male genital morphogenesis","type":"related"}],"termid":"GO:0048808"}


id: PBO:0029702
data:
  {"annotation_feature_type":"gene","cv_name":"cvterm_property_type","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"annotation_extension_relation-abnormal_nucleoside_diphosphate_kinase_activity","termid":"PBO:0029702"}


id: GO:0099529
data:
  {"annotation_feature_type":"gene","cv_name":"molecular_function","definition":"Neurotransmitter receptor activity occurring in the postsynaptic membrane that is involved in regulating postsynaptic membrane potential, either directly (ionotropic receptors) or indirectly (e.g. via GPCR activation of an ion channel).","definition_xrefs":["GOC:dos"],"direct_ancestors":[{"relation_name":"is_a","term_name":"postsynaptic neurotransmitter receptor activity","termid":"GO:0098960"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0003674"},{"rel_name":"is_a","termid":"GO:0038023"}],"interesting_parent_ids":["GO:0003674","GO:0038023"],"is_obsolete":false,"name":"neurotransmitter receptor activity involved in regulation of postsynaptic membrane potential","termid":"GO:0099529"}


id: PBO:0003326
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"meiotic recombination protein Rec27","termid":"PBO:0003326"}


id: MONDO:0859192
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"famililal cerebral cavernous malformations","termid":"MONDO:0031037"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0002320"}],"interesting_parent_ids":["MONDO:0002320"],"is_obsolete":false,"name":"cerebral cavernous malformation 4","secondary_identifiers":["UMLS:C5561991","OMIM:619538","MEDGEN:1794201"],"synonyms":[{"name":"cerebral cavernous malformations 4","type":"exact"}],"termid":"MONDO:0859192","xrefs":{"Monarch":{"xref_id":"0859192"}}}


id: PBO:0017031
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"human GEMIN7 ortholog","termid":"PBO:0017031"}


id: MONDO:0025420
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"A condition of chronic gastroenteritis in adult pigs and fatal gastroenteritis in piglets caused by a coronavirus.","definition_xrefs":["MESH:D005761"],"direct_ancestors":[{"relation_name":"is_a","term_name":"swine disease","termid":"MONDO:0024990"},{"relation_name":"is_a","term_name":"viral infectious disease, non-human animal","termid":"MONDO:0700053"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"gastroenteritis, transmissible, of swine","synonyms":[{"name":"Gastroenteritides, porcine transmissible","type":"related"},{"name":"Gastroenteritides, swine transmissible","type":"related"},{"name":"Gastroenteritides, transmissible porcine","type":"related"},{"name":"gastroenteritis, porcine transmissible","type":"related"},{"name":"gastroenteritis, swine transmissible","type":"related"},{"name":"gastroenteritis, transmissible porcine","type":"related"},{"name":"gastroenteritis, transmissible, porcine","type":"related"},{"name":"porcine Gastroenteritides, transmissible","type":"related"},{"name":"porcine gastroenteritis, transmissible","type":"related"},{"name":"porcine transmissible Gastroenteritides","type":"related"},{"name":"porcine transmissible gastroenteritis","type":"related"},{"name":"swine transmissible Gastroenteritides","type":"related"},{"name":"swine transmissible gastroenteritis","type":"related"},{"name":"transmissible Gastroenteritides, porcine","type":"related"},{"name":"transmissible Gastroenteritides, swine","type":"related"},{"name":"transmissible gastroenteritis of swine","type":"related"},{"name":"transmissible gastroenteritis, porcine","type":"related"},{"name":"transmissible gastroenteritis, swine","type":"related"},{"name":"transmissible porcine Gastroenteritides","type":"related"},{"name":"transmissible porcine gastroenteritis","type":"related"}],"termid":"MONDO:0025420","xrefs":{"Monarch":{"xref_id":"0025420"}}}


id: PBO:0065450
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"proteasome 26S subunit, ATPase, 6 pseudogene 1","termid":"PBO:0065450"}


id: PBO:0060091
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"MT-ND5 pseudogene 38","termid":"PBO:0060091"}


id: PBO:0074210
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"solute carrier family 41 member 3","termid":"PBO:0074210"}


id: MONDO:0005940
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Infections with viruses of the genus respirovirus, family paramyxoviridae. Host cell infection occurs by adsorption, via hemagglutinin, to the cell surface.","definition_xrefs":["MESH:D010253"],"direct_ancestors":[{"relation_name":"is_a","term_name":"Paramyxoviridae infectious disease","termid":"MONDO:0005896"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"respirovirus infectious disease","secondary_identifiers":["MEDGEN:811417","UMLS:C3714630","EFO:0007465"],"synonyms":[{"name":"infections, Respirovirus","type":"related"}],"termid":"MONDO:0005940","xrefs":{"Monarch":{"xref_id":"0005940"}}}


id: MONDO:0859221
data:
  {"annotated_genes":["SJAG_02464"],"annotation_feature_type":"gene","cv_annotations":{"mondo":[{"annotations":[89266],"is_not":false,"summary":null,"term":"MONDO:0859221"}]},"cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"neurodevelopmental disorder","termid":"MONDO:0700092"}],"gene_count":1,"genes_by_uniquename":{"SJAG_02464":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0700092"}],"interesting_parent_ids":["MONDO:0700092"],"is_obsolete":false,"name":"Yoon-Bellen neurodevelopmental syndrome","references_by_uniquename":{"PB_REF:0000006":null},"secondary_identifiers":["MEDGEN:1794276","OMIM:619701","UMLS:C5562066","DOID:0070468"],"termid":"MONDO:0859221","terms_by_termid":{"MONDO:0859221":null},"xrefs":{"Monarch":{"xref_id":"0859221"}}}


id: GO:0010234
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"The process in which a cell becomes capable of differentiating autonomously into a tapetal cell of anthers in an environment that is neutral with respect to the developmental pathway; upon specification, the cell fate can be reversed.","definition_xrefs":["GOC:mg"],"direct_ancestors":[{"relation_name":"is_a","term_name":"cell fate specification","termid":"GO:0001708"},{"relation_name":"is_a","term_name":"developmental process involved in reproduction","termid":"GO:0003006"},{"relation_name":"part_of","term_name":"anther wall tapetum cell differentiation","termid":"GO:0048657"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"anther wall tapetum cell fate specification","synonyms":[{"name":"tapetal cell fate specification","type":"broad"}],"termid":"GO:0010234"}


id: PBO:0067822
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"RNA, 5S ribosomal pseudogene 124","termid":"PBO:0067822"}


id: PBO:0058421
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 4790","termid":"PBO:0058421"}


id: GO:0031567
data:
  {"annotated_genes":["SJAG_03681","SJAG_00071","SJAG_04332","SJAG_01210","SJAG_03048","SJAG_01401","SJAG_02392","SJAG_04280","SJAG_03602"],"annotation_feature_type":"gene","cv_annotations":{"biological_process":[{"annotations":[103639,90950,104375,110930,117963],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031568"},{"annotations":[97861,118066,100440,96551],"is_not":false,"rel_names":["is_a"],"summary":null,"term":"GO:0031569"}]},"cv_name":"biological_process","definition":"A signal transduction process that contributes to a cell size control checkpoint during mitosis.","definition_xrefs":["GOC:mtg_cell_cycle"],"direct_ancestors":[{"relation_name":"is_a","term_name":"mitotic cell cycle checkpoint signaling","termid":"GO:0007093"},{"relation_name":"is_a","term_name":"negative regulation of mitotic cell cycle phase transition","termid":"GO:1901991"}],"gene_count":9,"genes_by_uniquename":{"SJAG_00071":null,"SJAG_01210":null,"SJAG_01401":null,"SJAG_02392":null,"SJAG_03048":null,"SJAG_03602":null,"SJAG_03681":null,"SJAG_04280":null,"SJAG_04332":null},"genotype_count":0,"interesting_parent_details":[{"rel_name":"negatively_regulates","termid":"GO:0007049"},{"rel_name":"regulates","termid":"GO:0007049"},{"rel_name":"part_of","termid":"GO:0023052"},{"rel_name":"regulates","termid":"GO:0044772"},{"rel_name":"part_of","termid":"GO:0007049"},{"rel_name":"is_a","termid":"GO:0008150"},{"rel_name":"negatively_regulates","termid":"GO:0044772"}],"interesting_parent_ids":["GO:0007049","GO:0008150","GO:0023052","GO:0044772"],"is_obsolete":false,"name":"mitotic cell size control checkpoint signaling","references_by_uniquename":{"GO_REF:0000107":null},"secondary_identifiers":["GO:0072471"],"synonyms":[{"name":"mitotic cell cycle cell size control checkpoint","type":"related"},{"name":"mitotic cell size control checkpoint","type":"related"},{"name":"signal transduction involved in cell size control checkpoint","type":"related"}],"termid":"GO:0031567","terms_by_termid":{"GO:0031568":null,"GO:0031569":null}}


id: MONDO:0010956
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"hereditary disease","termid":"MONDO:0003847"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"enamel hypoplasia, cataracts, and aqueductal stenosis","secondary_identifiers":["MEDGEN:371497","MESH:C563430","OMIM:600907","UMLS:C1833163"],"synonyms":[{"name":"Seow Najjar syndrome","type":"related"},{"name":"enamel hypoplasia, capsular cataracts, and ductal stenosis","type":"related"},{"name":"enamel hypoplasia, cataracts, and aqueductal stenosis","type":"exact"}],"termid":"MONDO:0010956","xrefs":{"Monarch":{"xref_id":"0010956"}}}


id: PBO:0057175
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"microRNA 326","termid":"PBO:0057175"}


id: PBO:0040413
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ATPase H+ transporting V0 subunit a4","termid":"PBO:0040413"}


id: GO:0035752
data:
  {"annotation_feature_type":"gene","cv_name":"biological_process","definition":"Any process that increases the pH of the lysosomal lumen, measured by the concentration of the hydrogen ion.","definition_xrefs":["GOC:rph","GOC:bf"],"direct_ancestors":[{"relation_name":"is_a","term_name":"regulation of lysosomal lumen pH","termid":"GO:0035751"},{"relation_name":"is_a","term_name":"intracellular pH elevation","termid":"GO:0051454"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"GO:0008150"}],"interesting_parent_ids":["GO:0008150"],"is_obsolete":false,"name":"lysosomal lumen pH elevation","synonyms":[{"name":"lysosome pH elevation","type":"exact"}],"termid":"GO:0035752"}


id: MONDO:0100207
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Epilepsy starting in the first 12 months of life, including self-limiting and refractory seizures, and epilepsies with and without developmental disorders.","direct_ancestors":[{"relation_name":"is_a","term_name":"epilepsy","termid":"MONDO:0005027"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005027"}],"interesting_parent_ids":["MONDO:0005027"],"is_obsolete":false,"name":"infantile-onset epilepsy","termid":"MONDO:0100207","xrefs":{"Monarch":{"xref_id":"0100207"}}}


id: PATO:0001347
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A bacterial mating type indicating the presence of F plasmid in a bacterial cell.","definition_xrefs":["MGED:MGED"],"direct_ancestors":[{"relation_name":"is_a","term_name":"bacterial mating type","termid":"PATO:0001335"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"F mating type","termid":"PATO:0001347"}


id: PBO:0062906
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"oxytocin/neurophysin I prepropeptide","termid":"PBO:0062906"}


id: PATO:0000773
data:
  {"annotation_feature_type":"gene","cv_name":"quality","definition":"A discrimination quality in a bearer by virtue of the bearer's liking a perceived stimulus.","definition_xrefs":["PATOC:GVG"],"direct_ancestors":[{"relation_name":"is_a","term_name":"discrimination","termid":"PATO:0000189"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"preference","termid":"PATO:0000773"}


id: MONDO:0032664
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","direct_ancestors":[{"relation_name":"is_a","term_name":"primary ciliary dyskinesia","termid":"MONDO:0016575"}],"gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"ciliary dyskinesia, primary, 40","secondary_identifiers":["MEDGEN:1648365","OMIM:618300","UMLS:C4749028","DOID:0111853"],"synonyms":[{"name":"CILD40","type":"related"},{"name":"CILIARY DYSKINESIA, PRIMARY, 40","type":"related"},{"name":"Ciliary Dyskinesia, Primary, 40, With or Without Situs Inversus","type":"related"}],"termid":"MONDO:0032664","xrefs":{"Monarch":{"xref_id":"0032664"}}}


id: PBO:0117047
data:
  {"annotation_feature_type":"gene","cv_name":"PomBase gene products","gene_count":0,"genotype_count":0,"is_obsolete":false,"name":"membrane bound acylglycerophosphatidylinositol O-acyltransferase MBOAT7","termid":"PBO:0117047"}


id: MONDO:0000392
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","gene_count":0,"genotype_count":0,"name":"obsolete fetal alcohol syndrome (obsolete MONDO:0000392)","termid":"MONDO:0000392","xrefs":{"Monarch":{"xref_id":"0000392"}}}


id: MONDO:0012840
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"Any inflammatory bowel disease in which the cause of the disease is a mutation in the IL23R gene.","definition_xrefs":["MONDO:patterns/disease_series_by_gene"],"direct_ancestors":[{"relation_name":"is_a","term_name":"inflammatory bowel disease","termid":"MONDO:0005265"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0004335"},{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0004335","MONDO:0005046"],"is_obsolete":false,"name":"inflammatory bowel disease 17","secondary_identifiers":["UMLS:C2677091","MEDGEN:436857","OMIM:612261","DOID:0110883","MESH:C567378"],"synonyms":[{"name":"IBD17","type":"exact"},{"name":"IL23R inflammatory bowel disease","type":"exact"},{"name":"inflammatory bowel disease 17","type":"exact"},{"name":"inflammatory bowel disease 17, protection against","type":"exact"},{"name":"inflammatory bowel disease caused by mutation in IL23R","type":"exact"},{"name":"inflammatory bowel disease type 17","type":"exact"}],"termid":"MONDO:0012840","xrefs":{"Monarch":{"xref_id":"0012840"}}}


id: MONDO:0020347
data:
  {"annotation_feature_type":"gene","cv_name":"mondo","definition":"An inflammatory neuropathy belonging to the clinical spectrum of Guillain-Barre syndrome (GBS).","definition_xrefs":["Orphanet:98916"],"direct_ancestors":[{"relation_name":"excluded_subClassOf","term_name":"Guillain-Barre syndrome, familial","termid":"MONDO:0007691"},{"relation_name":"is_a","term_name":"Guillain-Barre syndrome","termid":"MONDO:0016218"},{"relation_name":"is_a","term_name":"acute disease","termid":"MONDO:0020683"}],"gene_count":0,"genotype_count":0,"interesting_parent_details":[{"rel_name":"is_a","termid":"MONDO:0005046"}],"interesting_parent_ids":["MONDO:0005046"],"is_obsolete":false,"name":"acute inflammatory demyelinating polyradiculoneuropathy","secondary_identifiers":["GARD:16873","MEDGEN:1648220","UMLS:C4551910","NCIT:C116926","icd11.foundation:1196874419"],"synonyms":[{"name":"AIDP","type":"exact"},{"name":"GBS, acute inflammatory demyelinating polyradiculoneuropathic form","type":"exact"},{"name":"Guillain-Barre syndrome, acute inflammatory demyelinating polyradiculoneuropathic form","type":"exact"},{"name":"Guillain-Barré syndrome, acute inflammatory demyelinating polyradiculoneuropathic form","type":"exact"},{"name":"acute idiopathic demyelinating polyneuropathy","type":"exact"},{"name":"acute inflammatory demyelinating polyradiculopathy","type":"exact"},{"name":"acute inflammatory polyneuropathy","type":"exact"}],"termid":"MONDO:0020347","xrefs":{"Monarch":{"xref_id":"0020347"}}}


